3248 215 20 3 chr20 0 735 -72153147 + L1PA15-16 LINE L1 1867 2614 -4235 992 147 0 0 chr20 735 878 -72153004 + AluJo SINE Alu 1 143 -169 835 105 8 8 chr20 912 1045 -72152837 + L1PA15 LINE L1 6033 6165 0 502 273 17 17 chr20 1045 1221 -72152661 - L1MEc LINE L1 -4676 1720 1545 227 301 2 9 chr20 1673 1782 -72152100 + MIR3 SINE MIR 78 167 -41 247 158 35 53 chr20 1834 1891 -72151991 + MIR3 SINE MIR 108 163 -45 246 315 18 36 chr20 1927 2038 -72151844 + MER117 DNA MER1_type 74 182 -15 2322 84 3 3 chr20 2280 2578 -72151304 - AluSq SINE Alu -15 298 1 23 0 0 0 chr20 2590 2613 -72151269 + AT_rich Low_complexity Low_complexity 1 23 0 6979 127 14 6 chr20 3397 5026 -72148856 - L1MA2 LINE L1 0 6304 4664 3107 123 43 2 chr20 5028 5514 -72148368 + MER75 DNA T2_type 1 506 -8 206 62 31 0 chr20 5705 5737 -72148145 + (TC)n Simple_repeat Simple_repeat 1 33 0 261 0 0 0 chr20 7563 7592 -72146290 + (CA)n Simple_repeat Simple_repeat 2 30 0 341 308 47 86 chr20 7592 7826 -72146056 - L1ME LINE L1 -540 5581 5357 225 240 90 20 chr20 8164 8264 -72145618 - L1ME LINE L1 -251 5870 5764 35 24 0 0 chr20 8420 8462 -72145420 + AT_rich Low_complexity Low_complexity 1 42 0 234 341 12 12 chr20 8753 8838 -72145044 + L3 LINE CR1 1455 1539 -38 1654 283 61 6 chr20 9000 9711 -72144171 + L2 LINE L2 2417 3172 -141 1911 189 0 22 chr20 9761 10163 -72143719 - L1 LINE L1 -754 5392 5000 438 220 78 14 chr20 10188 10329 -72143553 + L2 LINE L2 3162 3311 -2 222 163 23 0 chr20 10753 10796 -72143086 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 300 12 0 chr20 10834 10914 -72142968 + L2 LINE L2 2892 2972 -342 615 304 140 53 chr20 10967 11090 -72142792 + L2 LINE L2 1177 1288 -2026 2099 131 0 0 chr20 11090 11388 -72142494 - AluSc SINE Alu -11 298 1 615 304 140 53 chr20 11388 11659 -72142223 + L2 LINE L2 1288 1534 -1780 2304 98 10 3 chr20 11659 11964 -72141918 - AluSq SINE Alu -4 309 3 615 304 140 53 chr20 11964 12341 -72141541 + L2 LINE L2 1534 2016 -1298 2626 124 26 35 chr20 12820 13048 -72140834 - L1MA5 LINE L1 0 6300 6077 2050 151 15 18 chr20 13048 13386 -72140496 - MER1B DNA MER1_type 0 337 1 2626 124 26 35 chr20 13386 13616 -72140266 - L1MA5 LINE L1 -223 6077 5846 249 305 60 46 chr20 13719 13870 -72140012 + LTR16C LTR ERVL 323 475 -16 209 291 123 50 chr20 13894 14073 -72139809 + L2 LINE L2 2033 2224 -1090 2157 137 12 9 chr20 14074 14417 -72139465 - L1P LINE L1 -2289 3857 3514 214 255 0 0 chr20 14461 14508 -72139374 + CT-rich Low_complexity Low_complexity 1 47 0 2374 88 3 0 chr20 16022 16317 -72137565 - AluY SINE Alu -15 296 1 6667 73 24 0 chr20 16322 17573 -72136309 - L1PA8 LINE L1 -11 6161 4897 4410 106 12 5 chr20 17573 18236 -72135646 + L1P LINE L1 2119 2786 -3360 523 250 9 0 chr20 18434 18546 -72135336 + MER81 DNA DNA 1 113 -1 225 333 0 0 chr20 18855 18927 -72134955 + L2 LINE L2 3187 3258 -14 611 254 182 0 chr20 18985 19260 -72134622 + Charlie2 DNA MER1_type 1 325 -2457 415 265 19 52 chr20 19261 19472 -72134410 + Charlie2 DNA MER1_type 1855 2058 -804 * 948 264 74 7 chr20 19466 19872 -72134010 + Charlie2 DNA MER1_type 2380 2812 -50 2495 58 3 0 chr20 19971 20281 -72133601 - AluY SINE Alu 0 311 1 183 156 0 0 chr20 20627 20659 -72133223 + (TA)n Simple_repeat Simple_repeat 1 32 0 1579 123 67 15 chr20 20677 20946 -72132936 - L1PB4 LINE L1 -9 6147 5865 477 0 0 0 chr20 21307 21360 -72132522 + (TG)n Simple_repeat Simple_repeat 2 54 0 1524 203 81 13 chr20 21463 21848 -72132034 - L1M4 LINE L1 -899 5247 4837 1215 322 40 14 chr20 21857 22351 -72131531 + L1PA16 LINE L1 868 1374 -6200 12724 210 26 44 chr20 22817 28331 -72125551 + L1PA16 LINE L1 2182 7603 -1 2262 220 94 57 chr20 28398 28975 -72124907 - MER77 LTR ERV1 -7 598 1 5205 178 59 25 chr20 30591 31699 -72122183 - L1PA16 LINE L1 -6 6160 4954 2325 110 0 0 chr20 31699 32007 -72121875 - AluSg SINE Alu -2 308 1 5205 178 59 25 chr20 32007 32873 -72121009 - L1PA16 LINE L1 -1212 4954 4118 338 155 84 0 chr20 32878 32949 -72120933 - L1 LINE L1 -1888 4258 4182 1749 244 28 25 chr20 32984 33586 -72120296 - L1M4 LINE L1 -904 5242 4639 884 323 68 17 chr20 33619 34028 -72119854 + L1PBb LINE L1 8 437 -6412 363 364 67 18 chr20 34398 34563 -72119319 + L1PBb LINE L1 694 866 -5983 379 278 83 101 chr20 34601 34878 -72119004 + L1PBb LINE L1 796 1067 -5782 8181 157 95 10 chr20 35085 36776 -72117106 + L1PBb LINE L1 1040 2957 -3891 21 0 0 0 chr20 37622 37643 -72116239 + AT_rich Low_complexity Low_complexity 1 21 0 330 276 88 54 chr20 37724 37963 -72115919 - L1MDa LINE L1 -3987 2553 2307 276 256 116 39 chr20 38136 38343 -72115539 - L1MDa LINE L1 -3736 2804 2582 300 284 123 31 chr20 38544 38836 -72115046 - L1MDa LINE L1 -4640 2081 1763 354 273 169 8 chr20 38937 39186 -72114696 - HAL1 LINE L1 -1220 1287 999 304 297 187 29 chr20 39370 39616 -72114266 + HAL1 LINE L1 1613 1897 -610 248 273 140 47 chr20 40710 40860 -72113022 + MLT1J LTR MaLR 238 401 -110 336 266 35 18 chr20 41275 41388 -72112494 + L2 LINE L2 3199 3313 0 195 229 0 0 chr20 41644 41679 -72112203 - L3 LINE CR1 -93 1484 1450 725 276 126 37 chr20 41856 42709 -72111173 + L1MCc LINE L1 1129 2254 -4868 372 259 37 9 chr20 42724 42832 -72111050 + L1M3d LINE L1 1 111 -5780 3019 227 65 35 chr20 42837 44752 -72109130 + L1MCc LINE L1 2175 4145 -2796 2267 105 0 0 chr20 44760 45055 -72108827 - AluSg SINE Alu -15 295 1 392 283 27 36 chr20 45127 45346 -72108536 - L1M4 LINE L1 -3076 3070 2854 22 35 0 0 chr20 45346 45375 -72108507 + AT_rich Low_complexity Low_complexity 1 29 0 1230 265 51 14 chr20 45503 45668 -72108214 - L1M4 LINE L1 -3372 2774 2617 2306 80 3 13 chr20 45668 45969 -72107913 - AluSg SINE Alu -12 298 1 1230 265 51 14 chr20 45969 46237 -72107645 - L1M4 LINE L1 -3529 2617 2325 1308 125 41 108 chr20 46326 46485 -72107397 + L1MCa LINE L1 1164 1332 -5094 4908 55 16 0 chr20 46485 47107 -72106775 + L1PA8 LINE L1 5541 6172 0 1308 125 41 108 chr20 47107 47316 -72106566 + L1MCa LINE L1 1332 1507 -4919 5793 166 18 12 chr20 47393 48655 -72105227 - L1M1 LINE L1 -871 5432 4057 25026 29 15 1 chr20 48662 54708 -72099174 + L1PA2 LINE L1 1 6172 0 3244 169 35 27 chr20 54708 54776 -72099106 - L1M1 LINE L1 -2079 4067 4001 2282 99 6 10 chr20 54776 55089 -72098793 - AluSq SINE Alu -1 312 1 3244 169 35 27 chr20 55089 55795 -72098087 - L1M1 LINE L1 -2145 4001 3287 1133 164 55 14 chr20 55799 56165 -72097717 + L1M2 LINE L1 2647 3027 -3821 317 175 6 186 chr20 56193 56376 -72097506 + L1PBb LINE L1 711 860 -5344 1053 261 34 0 chr20 56392 56687 -72097195 + L1PA15-16 LINE L1 1265 1569 -5280 689 259 0 0 chr20 56667 56833 -72097049 + L1PA15-16 LINE L1 1336 1501 -5349 * 4654 238 24 76 chr20 56862 57675 -72096207 + L1PA15-16 LINE L1 1271 2125 -4724 2081 129 0 22 chr20 57675 58012 -72095870 - AluSx SINE Alu 0 312 1 4654 238 24 76 chr20 58012 59236 -72094646 + L1PA15-16 LINE L1 2125 3208 -3641 873 114 8 0 chr20 59237 59369 -72094513 + L1PB4 LINE L1 6016 6148 -8 430 215 15 74 chr20 59400 59535 -72094347 + L1ME1 LINE L1 5461 5587 -579 306 73 0 0 chr20 59536 59577 -72094305 + (T)n Simple_repeat Simple_repeat 1 41 0 1567 252 29 41 chr20 59743 60323 -72093559 + L1ME1 LINE L1 5588 6160 -6 357 314 43 24 chr20 62074 62402 -72091480 - L1ME4a LINE L1 -211 5910 5577 438 269 71 25 chr20 63093 63290 -72090592 + L2 LINE L2 3104 3309 -4 195 129 0 0 chr20 64295 64326 -72089556 + (CAA)n Simple_repeat Simple_repeat 1 31 0 821 214 65 0 chr20 64682 64850 -72089032 - MER5A DNA MER1_type -9 180 2 225 194 65 32 chr20 64963 65025 -72088857 - MIR SINE MIR -77 185 122 298 370 92 31 chr20 65691 66072 -72087810 + L2 LINE L2 2554 2957 -357 185 401 28 14 chr20 66623 66765 -72087117 + MIR SINE MIR 8 151 -111 299 362 97 16 chr20 67368 67553 -72086329 + MIR SINE MIR 5 204 -58 456 274 74 112 chr20 68105 68529 -72085353 + L1MDa LINE L1 505 855 -5685 4465 169 39 30 chr20 68774 69880 -72084002 - L1MA9 LINE L1 -30 6282 5167 1059 217 10 20 chr20 69881 70180 -72083702 + L1MA9 LINE L1 4849 5144 -1002 2821 198 90 57 chr20 70192 70243 -72083639 + L1MDa LINE L1 1227 1275 -5265 2317 98 0 19 chr20 70243 70558 -72083324 + AluY SINE Alu 1 309 -2 2821 198 90 57 chr20 70558 71382 -72082500 + L1MDa LINE L1 1275 2152 -4388 1503 159 53 4 chr20 71382 71646 -72082236 - AluJb SINE Alu -1 311 35 2821 198 90 57 chr20 71646 71923 -72081959 + L1MDa LINE L1 2152 2418 -4122 1046 262 36 13 chr20 71924 72221 -72081661 + L1MDa LINE L1 2479 2768 -3772 1708 140 70 7 chr20 72221 72507 -72081375 + AluJb SINE Alu 1 304 -8 1046 262 36 13 chr20 72507 72650 -72081232 + L1MDa LINE L1 2768 3078 -3462 * 1234 251 61 30 chr20 72645 73107 -72080775 + L1MD2 LINE L1 5631 6106 -253 434 223 19 0 chr20 73170 73273 -72080609 + MER3 DNA MER1_type 2 106 -103 632 250 36 12 chr20 73282 73450 -72080432 + MIR SINE MIR 88 259 -3 458 339 79 83 chr20 73502 73998 -72079884 - L1MEd LINE L1 -5373 746 253 329 305 63 26 chr20 74105 74418 -72079464 - L1MDa LINE L1 -3819 2721 2395 277 127 36 0 chr20 75010 75065 -72078817 - L1MB3 LINE L1 0 6183 6127 2832 118 42 16 chr20 75067 75566 -72078316 - L1MA5 LINE L1 0 6300 5789 239 133 22 0 chr20 75634 75679 -72078203 + (TA)n Simple_repeat Simple_repeat 2 47 0 574 176 0 0 chr20 75679 75781 -72078101 - L1 LINE L1 -1197 4949 4848 288 0 0 0 chr20 76629 76661 -72077221 + (TG)n Simple_repeat Simple_repeat 1 32 0 319 286 224 5 chr20 76666 76862 -72077020 + MIR SINE MIR 11 249 -13 192 40 0 0 chr20 78453 78478 -72075404 + (TTG)n Simple_repeat Simple_repeat 3 27 0 377 283 0 0 chr20 78807 78899 -72074983 + L1MD3 LINE L1 6805 6896 -1099 7387 30 0 0 chr20 78899 79814 -72074068 - L1PA2 LINE L1 -1932 4214 3300 9657 30 5 0 chr20 79816 81746 -72072136 + L1PA2 LINE L1 4222 6155 0 1827 199 147 104 chr20 81748 81970 -72071912 + L1MC3 LINE L1 6871 7082 -703 304 259 0 12 chr20 81970 82051 -72071831 + MLT1I LTR MaLR 35 114 -453 1827 199 147 104 chr20 82051 82619 -72071263 + L1MC3 LINE L1 7082 7778 -7 354 312 70 14 chr20 82692 83061 -72070821 - L1M4 LINE L1 -2576 3570 3181 470 246 53 91 chr20 83084 83166 -72070716 + MLT1I LTR MaLR 104 188 -221 2085 131 3 0 chr20 83166 83457 -72070425 + AluSx SINE Alu 7 298 -14 470 246 53 91 chr20 83457 83659 -72070223 + MLT1I LTR MaLR 188 377 -32 21 0 0 0 chr20 83662 83683 -72070199 + AT_rich Low_complexity Low_complexity 1 21 0 471 35 0 0 chr20 83772 83829 -72070053 + (CA)n Simple_repeat Simple_repeat 2 58 0 272 133 0 0 chr20 83874 83919 -72069963 - L1MB7 LINE L1 -31 6153 6109 293 308 48 10 chr20 83919 84127 -72069755 - L1M4 LINE L1 -3021 3125 2910 344 163 36 104 chr20 85189 85248 -72068634 + L1MEc LINE L1 2521 2582 -3958 2237 124 12 15 chr20 85248 85586 -72068296 + MER1B DNA MER1_type 1 337 0 344 163 36 104 chr20 85586 85678 -72068204 + L1MEc LINE L1 2582 2644 -3896 3799 189 72 31 chr20 85684 86298 -72067584 - L1MA9 LINE L1 -38 6274 5602 1458 187 48 31 chr20 86298 86587 -72067295 - AluJo SINE Alu -18 294 1 3799 189 72 31 chr20 86587 86952 -72066930 - L1MA9 LINE L1 -710 5602 5254 642 248 95 5 chr20 87010 87220 -72066662 + L1MEc LINE L1 2712 2940 -3600 2614 229 39 35 chr20 87223 87962 -72065920 + L1M3b LINE L1 1 742 -5539 496 273 9 90 chr20 87943 88188 -72065694 + L1M3b LINE L1 599 794 -5487 * 2100 203 107 39 chr20 88241 88858 -72065024 + L1MD2 LINE L1 5680 6338 -21 700 260 25 15 chr20 89201 89397 -72064485 - MLT1H LTR MaLR -196 353 156 560 133 0 50 chr20 89875 89995 -72063887 - L1PA15 LINE L1 0 6165 6052 289 132 0 0 chr20 90022 90075 -72063807 - L1MA9 LINE L1 -35 6277 6225 867 175 18 0 chr20 90155 90326 -72063556 - L1MA9 LINE L1 -45 6267 6094 2394 77 0 3 chr20 90336 90646 -72063236 - AluY SINE Alu -2 309 1 2112 133 0 0 chr20 90646 90948 -72062934 - AluSx SINE Alu -10 302 1 1099 82 0 0 chr20 90949 91083 -72062799 - AluSq/x SINE Alu -179 134 1 1510 164 40 0 chr20 91083 91381 -72062501 - L1MA9 LINE L1 -209 6103 5794 344 91 36 0 chr20 91383 91438 -72062444 + L1MA9 LINE L1 5731 5787 -393 3385 73 0 9 chr20 91469 91921 -72061961 + LTR7 LTR ERV1 1 448 -2 6478 97 28 41 chr20 91924 93481 -72060401 + HERVH LTR ERV1 1 1855 -5858 5393 107 1 9 chr20 93481 94334 -72059548 + HERVH LTR ERV1 2142 2987 -4726 855 134 13 0 chr20 94328 94477 -72059405 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 94467 94974 -72058908 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 94976 95156 -72058726 + HERVH LTR ERV1 4488 4667 -3046 * 13577 76 4 7 chr20 95152 97104 -72056778 + HERVH LTR ERV1 5769 7713 0 1872 74 4 11 chr20 97104 97373 -72056509 + LTR7 LTR ERV1 1 267 -183 4491 124 4 13 chr20 97475 98242 -72055640 + HERVH LTR ERV1 2228 2987 -4726 855 134 13 0 chr20 98236 98385 -72055497 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 98375 98882 -72055000 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 98884 99064 -72054818 + HERVH LTR ERV1 4488 4667 -3046 * 13651 74 4 7 chr20 99060 101012 -72052870 + HERVH LTR ERV1 5769 7713 0 3336 76 7 7 chr20 101012 101460 -72052422 + LTR7 LTR ERV1 1 448 -2 1092 189 5 5 chr20 101464 101670 -72052212 + L1PA16 LINE L1 5937 6142 -24 1885 156 20 3 chr20 101683 101978 -72051904 + AluJo SINE Alu 1 300 -12 3272 133 70 23 chr20 102012 102077 -72051805 - L1MA8 LINE L1 -170 6121 6061 2095 141 0 3 chr20 102077 102376 -72051506 - AluSq SINE Alu -12 301 4 3272 133 70 23 chr20 102376 102921 -72050961 - L1MA8 LINE L1 -230 6061 5482 * 4736 172 81 3 chr20 102916 103944 -72049938 - L1MA8 LINE L1 -1397 4749 3642 1558 121 4 0 chr20 104053 104302 -72049580 + L1MA4 LINE L1 6046 6295 -5 42 77 0 0 chr20 104303 104394 -72049488 + AT_rich Low_complexity Low_complexity 1 91 0 180 0 0 0 chr20 104400 104420 -72049462 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 180 0 0 0 chr20 105707 105727 -72048155 + (CA)n Simple_repeat Simple_repeat 2 21 0 11778 205 25 19 chr20 105826 106224 -72047658 + L1PA16 LINE L1 1802 2196 -3970 270 0 0 0 chr20 106224 106254 -72047628 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 11778 205 25 19 chr20 106254 110189 -72043693 + L1PA16 LINE L1 2196 6157 -9 284 340 61 46 chr20 111659 111856 -72042026 - MIR SINE MIR -52 210 11 183 80 0 0 chr20 113273 113298 -72040584 + (T)n Simple_repeat Simple_repeat 1 25 0 2638 40 0 0 chr20 113298 113624 -72040258 - LTR17 LTR ERV1 -454 326 1 2313 51 0 0 chr20 113624 113916 -72039966 - HERV17 LTR ERV1 0 8626 8335 285 51 0 0 chr20 113906 113945 -72039937 - HERV17 LTR ERV1 -1078 7548 7510 * 22620 47 1 3 chr20 113938 116774 -72037108 - HERV17 LTR ERV1 -2607 6019 3190 1378 103 0 0 chr20 117333 117507 -72036375 - AluSx SINE Alu -138 174 1 198 0 0 0 chr20 117511 117533 -72036349 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 220 342 26 44 chr20 118210 118324 -72035558 + L2 LINE L2 2992 3103 -169 369 43 0 0 chr20 118352 118399 -72035483 + (TG)n Simple_repeat Simple_repeat 1 47 0 5409 93 19 7 chr20 118401 119209 -72034673 - L1PA15 LINE L1 -6 7578 6762 3389 153 2 8 chr20 119208 119840 -72034042 - L1PA12 LINE L1 -1255 6310 5683 * 5906 94 9 48 chr20 119840 120424 -72033458 + L1PA12 LINE L1 6342 6947 -640 2184 121 0 3 chr20 120424 120729 -72033153 + AluSq SINE Alu 1 304 -9 5906 94 9 48 chr20 120729 121303 -72032579 + L1PA12 LINE L1 6947 7453 -134 2115 132 0 0 chr20 121303 121591 -72032291 + AluSx SINE Alu 1 288 -24 5906 94 9 48 chr20 121591 121721 -72032161 + L1PA12 LINE L1 7453 7587 0 1165 113 13 0 chr20 121746 121905 -72031977 - AluSq SINE Alu -7 306 146 11018 177 35 17 chr20 121911 124084 -72029798 - L1PA15 LINE L1 -5341 2224 12 2060 276 178 15 chr20 124084 124271 -72029611 - L2 LINE L2 -10 3303 3148 1943 122 52 0 chr20 124271 124559 -72029323 + AluSq SINE Alu 1 303 -10 2060 276 178 15 chr20 124559 125549 -72028333 - L2 LINE L2 -165 3148 1921 499 336 29 13 chr20 125570 125808 -72028074 - MIR SINE MIR -19 243 2 3335 59 2 0 chr20 126087 126508 -72027374 - L1PA5 LINE L1 0 6154 5733 4094 36 13 0 chr20 126508 127036 -72026846 + L1P LINE L1 4186 4720 -1426 2653 134 14 1 chr20 128308 128795 -72025087 + L1PA14 LINE L1 5631 6154 0 22 35 0 0 chr20 129516 129545 -72024337 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 129802 129823 -72024059 + AT_rich Low_complexity Low_complexity 1 21 0 254 186 20 88 chr20 129824 129926 -72023956 - L1ME LINE L1 -5069 1001 907 2792 256 57 26 chr20 129927 130892 -72022990 + L1M4 LINE L1 3197 4206 -1940 2195 117 8 8 chr20 130892 131250 -72022632 - L1MA3 LINE L1 0 6305 5948 2792 256 57 26 chr20 131250 131470 -72022412 + L1M4 LINE L1 4206 4418 -1728 309 208 72 13 chr20 132150 132267 -72021615 - MLT1I LTR MaLR -236 173 46 2223 149 8 0 chr20 132428 132790 -72021092 - MER47A DNA MER2_type -1 365 1 1809 159 28 7 chr20 132905 133188 -72020694 - AluJo SINE Alu -23 289 1 249 317 33 33 chr20 134113 134233 -72019649 - MIR SINE MIR -73 135 16 1010 203 20 0 chr20 134439 134636 -72019246 - MER105 DNA DNA -3 201 1 428 363 113 39 chr20 134911 135595 -72018287 + L2 LINE L2 227 1003 -2311 2262 65 0 4 chr20 135595 135871 -72018011 - AluY SINE Alu 0 311 37 428 363 113 39 chr20 135871 136140 -72017742 + L2 LINE L2 1003 1251 -2063 214 255 0 20 chr20 136180 136231 -72017651 + L2 LINE L2 3200 3249 -64 * 523 255 62 14 chr20 136203 136348 -72017534 + L2 LINE L2 3161 3312 -1 216 343 29 20 chr20 136399 136501 -72017381 - L2 LINE L2 -226 3046 2944 811 246 51 60 chr20 136742 137076 -72016806 + Charlie1a DNA MER1_type 1 331 -1124 626 260 46 23 chr20 137179 137398 -72016484 + MER93a LTR ERV1 61 284 -118 1118 152 0 0 chr20 137403 137568 -72016314 - AluJo/FRAM SINE Alu -15 297 133 1830 132 0 60 chr20 137569 137887 -72015995 - AluJb SINE Alu -13 299 1 616 118 0 36 chr20 137904 138014 -72015868 + MER93a LTR ERV1 297 402 0 1146 236 19 0 chr20 138016 138283 -72015599 + Charlie1a DNA MER1_type 344 615 -840 913 268 231 25 chr20 138283 138724 -72015158 + MLT1G1 LTR MaLR 56 587 -8 582 195 79 12 chr20 139229 139393 -72014489 + Charlie1 DNA MER1_type 1463 1637 -1124 181 299 21 52 chr20 140013 140110 -72013772 + MIR SINE MIR 89 182 -80 911 186 0 0 chr20 140145 140290 -72013592 + FAM SINE Alu 1 145 -40 360 148 0 0 chr20 140301 140362 -72013520 + (TG)n Simple_repeat Simple_repeat 2 62 0 337 235 15 125 chr20 140529 140665 -72013217 + L2 LINE L2 3192 3312 -1 2412 93 3 3 chr20 140921 141234 -72012648 - AluSq SINE Alu 0 313 1 930 216 64 0 chr20 141897 142101 -72011781 + L1M1 LINE L1 562 778 -6787 8079 170 42 35 chr20 142108 143914 -72009968 + L1M1 LINE L1 1680 3497 -4068 819 130 17 17 chr20 143925 144102 -72009780 + GA-rich Low_complexity Low_complexity 1 177 0 3920 194 9 6 chr20 144102 144130 -72009752 + L1M1 LINE L1 3464 3490 -4075 360 0 0 0 chr20 144130 144170 -72009712 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 3920 194 9 6 chr20 144170 145134 -72008748 + L1M1 LINE L1 3490 4461 -3104 8090 119 14 4 chr20 145219 146496 -72007386 + HSMAR2 DNA Mariner 12 1301 -1 396 323 161 0 chr20 146544 146699 -72007183 - MER5A DNA MER1_type 0 189 10 292 247 84 97 chr20 146708 147328 -72006554 + L1M4 LINE L1 2876 3487 -2659 4358 79 7 19 chr20 148411 149029 -72004853 + L1PA12 LINE L1 5552 6161 -7 2227 100 0 17 chr20 149322 149621 -72004261 + AluSx SINE Alu 1 294 -18 1190 78 78 0 chr20 150315 150494 -72003388 - L1PA10 LINE L1 -20 6148 5956 299 219 14 14 chr20 150936 151009 -72002873 + MIR SINE MIR 78 150 -112 956 168 24 64 chr20 152784 152815 -72001067 - MER33 DNA MER1_type -2341 244 213 2372 97 3 0 chr20 152815 153114 -72000768 - AluSg SINE Alu -10 300 1 956 168 24 64 chr20 153114 153332 -72000550 - MER33 DNA MER1_type -2372 213 5 363 336 0 20 chr20 153429 153575 -72000307 + MIR SINE MIR 5 147 -115 830 169 0 0 chr20 153666 153814 -72000068 - L1MA10 LINE L1 -2 6332 6185 2870 159 224 32 chr20 153815 154350 -71999532 + L1 LINE L1 4217 4648 -1498 2291 59 3 21 chr20 154350 154682 -71999200 + AluY SINE Alu 1 327 0 2870 159 224 32 chr20 154682 154919 -71998963 + L1 LINE L1 4648 5138 -1008 357 226 11 11 chr20 155460 155553 -71998329 + MLT1J LTR MaLR 24 116 -395 1617 177 6 51 chr20 155795 156106 -71997776 + AluJo SINE Alu 1 297 -15 2327 114 0 0 chr20 156109 156417 -71997465 + AluSq SINE Alu 1 308 -5 9158 86 30 13 chr20 156657 156751 -71997131 + HSMAR1 DNA Mariner 1 92 -1195 2368 86 3 0 chr20 156751 157052 -71996830 - AluSp SINE Alu -11 302 1 9158 86 30 13 chr20 157052 158222 -71995660 + HSMAR1 DNA Mariner 92 1287 0 1803 185 45 24 chr20 158891 159269 -71994613 + MLT1B LTR MaLR 5 390 0 1074 164 0 44 chr20 159336 159519 -71994363 + FAM SINE Alu 1 175 0 2431 99 0 0 chr20 159566 159870 -71994012 - AluSq SINE Alu -9 304 1 451 255 60 0 chr20 160755 160904 -71992978 - MIR SINE MIR -23 239 82 2204 90 0 4 chr20 161191 161469 -71992413 + AluSg SINE Alu 26 302 -8 1096 140 12 0 chr20 161893 162057 -71991825 + AluSg/x SINE Alu 138 303 -9 307 314 164 5 chr20 162084 162291 -71991591 - MIR SINE MIR -15 247 8 2385 94 0 0 chr20 162401 162698 -71991184 + AluY SINE Alu 1 297 -14 457 340 69 13 chr20 163698 164089 -71989793 - L1ME4a LINE L1 -3 6118 5706 233 306 92 19 chr20 164708 164914 -71988968 + L1MC4a LINE L1 6047 6267 -1541 1820 213 104 65 chr20 165153 165453 -71988429 + L1MC5 LINE L1 6617 6904 -1057 3926 116 24 2 chr20 165453 166050 -71987832 + L1MA9 LINE L1 5701 6310 -2 1820 213 104 65 chr20 166050 166126 -71987756 + L1MC5 LINE L1 6904 6976 -985 2145 131 6 10 chr20 166126 166438 -71987444 + AluSx SINE Alu 1 311 -1 1820 213 104 65 chr20 166438 166829 -71987053 + L1MC5 LINE L1 6976 7415 -546 423 219 116 0 chr20 167460 167615 -71986267 + L1MC5 LINE L1 7475 7647 -314 27 49 0 0 chr20 167617 167658 -71986224 + AT_rich Low_complexity Low_complexity 1 41 0 2208 117 0 16 chr20 167686 167994 -71985888 - AluSx SINE Alu -9 303 1 3588 179 52 20 chr20 168010 168046 -71985836 - L1MA9 LINE L1 -37 6275 6242 285 29 0 0 chr20 168046 168080 -71985802 + (TA)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr20 168079 168108 -71985774 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 3588 179 52 20 chr20 168080 168805 -71985077 - L1MA9 LINE L1 -70 6242 5519 665 249 25 35 chr20 168833 169034 -71984848 + L1MC5 LINE L1 7715 7913 -48 2603 102 14 3 chr20 169041 169412 -71984470 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr20 169593 169613 -71984269 + (CA)n Simple_repeat Simple_repeat 1 20 0 1179 229 185 25 chr20 169665 170032 -71983850 - MLT1H LTR MaLR 0 549 124 498 33 0 0 chr20 170115 170175 -71983707 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 343 273 113 7 chr20 170630 170780 -71983102 + L1M4 LINE L1 2875 3040 -3106 27 81 0 0 chr20 170943 171005 -71982877 + AT_rich Low_complexity Low_complexity 1 62 0 2221 112 0 3 chr20 171067 171362 -71982520 + AluSc SINE Alu 1 294 -15 2246 112 0 0 chr20 171413 171709 -71982173 + AluSq SINE Alu 1 296 -17 2398 102 0 0 chr20 171742 172046 -71981836 + AluSx SINE Alu 1 304 -8 2457 227 58 42 chr20 172250 172540 -71981342 - L1ME1 LINE L1 -15 6151 5867 2581 148 26 7 chr20 172540 172958 -71980924 + MSTA LTR MaLR 1 426 -2 2457 227 58 42 chr20 172958 173132 -71980750 - L1ME1 LINE L1 -299 5867 5697 2084 126 22 0 chr20 173132 173433 -71980449 + AluSx SINE Alu 1 307 0 2457 227 58 42 chr20 173433 173659 -71980223 - L1ME1 LINE L1 -469 5697 5448 200 158 40 53 chr20 173721 173797 -71980085 + A-rich Low_complexity Low_complexity 3 77 0 3649 167 60 19 chr20 173894 174575 -71979307 + MER67C LTR ERV1 2 710 0 375 23 0 0 chr20 174595 174639 -71979243 + (CA)n Simple_repeat Simple_repeat 1 44 0 478 217 104 17 chr20 174641 174756 -71979126 + MER50 LTR ERV1 10 134 -600 2126 131 0 0 chr20 174756 175053 -71978829 + AluSx SINE Alu 7 303 -9 1837 142 37 0 chr20 175053 175349 -71978533 - L1PB4 LINE L1 -233 5923 5617 1097 126 0 0 chr20 175350 175501 -71978381 + AluSg/x SINE Alu 146 296 -14 3741 117 36 6 chr20 175502 176050 -71977832 - MER4E-int LTR ERV1 -6193 565 1 1684 50 0 0 chr20 176050 176248 -71977634 - MER4E LTR ERV1 0 766 569 2982 87 36 42 chr20 176277 176575 -71977307 - MER4E LTR ERV1 -298 468 173 2445 74 0 0 chr20 176575 176874 -71977008 - AluY SINE Alu -12 299 1 2982 87 36 42 chr20 176874 177046 -71976836 - MER4E LTR ERV1 -593 173 1 278 124 0 169 chr20 177046 177133 -71976749 + MLT2C2 LTR ERVL 393 464 0 2857 103 81 48 chr20 177169 177243 -71976639 + L1MA5 LINE L1 5788 5858 -442 2071 127 18 26 chr20 177243 177583 -71976299 - MER1B DNA MER1_type 0 337 1 2857 103 81 48 chr20 177583 177682 -71976200 + L1MA5 LINE L1 5858 5952 -348 2329 98 3 0 chr20 177682 177979 -71975903 + AluSx SINE Alu 1 298 -14 2857 103 81 48 chr20 177979 178301 -71975581 + L1MA5 LINE L1 5952 6300 0 21 36 0 0 chr20 178301 178329 -71975553 + AT_rich Low_complexity Low_complexity 1 28 0 594 226 39 89 chr20 178380 178425 -71975457 + L1MC4 LINE L1 7688 7734 -308 252 0 0 0 chr20 178425 178453 -71975429 + (TA)n Simple_repeat Simple_repeat 2 29 0 594 226 39 89 chr20 178453 178664 -71975218 + L1MC4 LINE L1 7734 7931 -111 21 57 0 0 chr20 178796 178831 -71975051 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr20 179161 179182 -71974700 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 539 29 14 0 chr20 179591 179660 -71974222 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 209 83 28 0 chr20 179661 179697 -71974185 + (CATA)n Simple_repeat Simple_repeat 4 40 0 733 287 78 25 chr20 179777 180098 -71973784 - L1ME LINE L1 -297 5824 5487 191 130 0 22 chr20 180967 181013 -71972869 + (GA)n Simple_repeat Simple_repeat 2 46 0 819 286 68 53 chr20 182139 182593 -71971289 - LTR16B LTR ERVL -2 462 2 2027 224 13 35 chr20 183528 183792 -71970090 - L1ME2 LINE L1 -301 5863 5612 2191 73 4 18 chr20 183792 184106 -71969776 - AluSp SINE Alu 0 325 16 2027 224 13 35 chr20 184106 184357 -71969525 - L1ME2 LINE L1 -552 5612 5357 449 251 19 103 chr20 184379 184526 -71969356 + L1ME1 LINE L1 5915 6030 -136 2592 47 7 0 chr20 184526 184824 -71969058 + AluY SINE Alu 1 300 -11 449 251 19 103 chr20 184824 184947 -71968935 + L1ME1 LINE L1 6030 6162 -4 25 0 0 0 chr20 184949 184974 -71968908 + AT_rich Low_complexity Low_complexity 1 25 0 587 288 68 50 chr20 185086 185511 -71968371 + L1ME LINE L1 5289 5728 -393 * 3690 148 44 0 chr20 185499 186086 -71967796 + L1M1 LINE L1 1 613 -6952 384 22 0 0 chr20 186086 186131 -71967751 + (TG)n Simple_repeat Simple_repeat 1 45 0 254 32 0 0 chr20 186131 186162 -71967720 - AluYa5 SINE Alu -106 195 165 2599 179 155 22 chr20 186162 186755 -71967127 + MER52A LTR ERV1 1 672 -1083 38 0 0 0 chr20 186952 186990 -71966892 + AT_rich Low_complexity Low_complexity 1 38 0 33 0 0 0 chr20 187377 187410 -71966472 + AT_rich Low_complexity Low_complexity 1 33 0 2312 103 3 7 chr20 187620 187930 -71965952 - AluSg SINE Alu -1 309 1 1292 134 216 17 chr20 188218 188473 -71965409 + AluSg1 SINE Alu 2 302 0 1026 204 16 0 chr20 188483 188674 -71965208 + MLT1E2 LTR MaLR 272 465 -161 528 200 27 0 chr20 188834 188944 -71964938 - L1PBa LINE L1 -6316 547 435 * 758 219 6 0 chr20 188940 189100 -71964782 - L1PBa LINE L1 -6697 166 6 501 186 0 0 chr20 189123 189209 -71964673 - L1MA7 LINE L1 -342 5949 5864 262 287 114 31 chr20 189211 189535 -71964347 - L2 LINE L2 -133 3180 2830 253 301 93 26 chr20 189831 190024 -71963858 + HERVL74 LTR ERVL 3071 3276 -2409 959 158 113 0 chr20 190040 190217 -71963665 + L1PB4 LINE L1 5958 6154 -2 2379 82 7 0 chr20 190419 190722 -71963160 + AluSx SINE Alu 1 305 -7 1946 209 125 48 chr20 190952 191520 -71962362 + MER76 LTR ERV 6 629 -59 2025 150 0 0 chr20 191520 191814 -71962068 - AluJb SINE Alu -18 294 1 1946 209 125 48 chr20 191814 191877 -71962005 + MER76 LTR ERV 629 686 -2 564 242 13 46 chr20 191899 192052 -71961830 + MIR SINE MIR 61 208 -54 235 305 86 86 chr20 192175 192293 -71961589 + MLT1K LTR MaLR 125 242 -346 2150 130 0 7 chr20 192293 192594 -71961288 - AluSx SINE Alu -13 299 1 235 305 86 86 chr20 192594 192849 -71961033 + MLT1K LTR MaLR 241 498 -90 797 261 29 0 chr20 192958 193165 -71960717 - LTR16A LTR ERVL -8 442 230 492 208 0 0 chr20 193584 193690 -71960192 + GA-rich Low_complexity Low_complexity 2 107 0 423 83 0 0 chr20 194037 194097 -71959785 + (CA)n Simple_repeat Simple_repeat 1 60 0 295 233 242 0 chr20 194344 194464 -71959418 + MIR SINE MIR 114 262 0 533 306 82 64 chr20 194821 194968 -71958914 + L2 LINE L2 2214 2357 -957 1642 138 52 11 chr20 194968 195259 -71958623 - AluJo SINE Alu 0 305 4 533 306 82 64 chr20 195259 195585 -71958297 + L2 LINE L2 2357 2708 -606 1949 166 0 0 chr20 195585 195881 -71958001 - AluJb SINE Alu -16 296 1 533 306 82 64 chr20 195881 196121 -71957761 + L2 LINE L2 2708 2942 -372 260 228 0 0 chr20 196142 196199 -71957683 + MER5A DNA MER1_type 18 74 -115 2204 125 0 3 chr20 196200 196503 -71957379 + AluSx SINE Alu 1 302 -10 345 47 0 0 chr20 196503 196546 -71957336 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 507 127 56 8 chr20 196546 196672 -71957210 + GA-rich Low_complexity Low_complexity 1 132 0 255 248 229 0 chr20 196672 196777 -71957105 + MER5A DNA MER1_type 61 189 0 401 230 11 0 chr20 197296 197383 -71956499 + L2 LINE L2 2976 3063 -209 2325 90 0 40 chr20 197402 197723 -71956159 - AluSg1 SINE Alu -1 308 1 245 341 0 0 chr20 197941 198026 -71955856 + GA-rich Low_complexity Low_complexity 3 87 0 221 275 106 56 chr20 198308 198450 -71955432 - MIR3 SINE MIR -12 196 48 285 288 42 17 chr20 200188 200306 -71953576 + MIR3 SINE MIR 12 132 -76 200 196 107 0 chr20 200505 200561 -71953321 + MIR SINE MIR 34 95 -113 399 188 135 0 chr20 200570 200666 -71953216 + MIR SINE MIR 36 144 -118 260 232 72 0 chr20 201157 201226 -71952656 + MIR SINE MIR 139 212 -50 993 106 0 0 chr20 201548 201728 -71952154 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 21 57 0 0 chr20 202008 202043 -71951839 + GC_rich Low_complexity Low_complexity 1 35 0 327 285 79 18 chr20 202118 202283 -71951599 + MER104 DNA Tc2 6 180 0 2211 69 4 0 chr20 202296 202570 -71951312 + AluSg SINE Alu 1 275 -35 180 0 0 0 chr20 202576 202596 -71951286 + (TAA)n Simple_repeat Simple_repeat 2 21 0 182 189 54 0 chr20 202760 202797 -71951085 - MIR SINE MIR -153 109 71 456 256 89 49 chr20 203004 203250 -71950632 - MIR SINE MIR 0 262 7 464 328 22 6 chr20 203296 203476 -71950406 + MIR SINE MIR 10 192 -70 1711 194 0 3 chr20 203479 203765 -71950117 + AluJo SINE Alu 1 285 -27 205 40 0 0 chr20 203765 203790 -71950092 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1113 168 0 0 chr20 203797 203964 -71949918 + AluJo SINE Alu 120 286 -26 459 243 52 95 chr20 204159 204303 -71949579 - MIR SINE MIR 0 262 128 1636 176 48 4 chr20 204303 204575 -71949307 + AluJb SINE Alu 1 284 -28 459 243 52 95 chr20 204575 204640 -71949242 - MIR SINE MIR -134 128 62 546 328 74 11 chr20 204770 205054 -71948828 + L2 LINE L2 3012 3313 0 190 317 0 0 chr20 205092 205133 -71948749 + MIR SINE MIR 15 55 -207 2227 110 0 3 chr20 205195 205487 -71948395 + AluSx SINE Alu 1 291 -21 2275 112 0 0 chr20 205916 206210 -71947672 - AluSx SINE Alu -18 294 1 567 286 22 32 chr20 206328 206513 -71947369 + MIR SINE MIR 48 230 -32 249 270 0 0 chr20 207116 207179 -71946703 + MIR SINE MIR 6 68 -194 2081 119 14 3 chr20 207180 207465 -71946417 + AluSx SINE Alu 1 288 -24 23 33 0 0 chr20 207465 207495 -71946387 + AT_rich Low_complexity Low_complexity 1 30 0 768 278 0 28 chr20 207495 207707 -71946175 + MIR SINE MIR 57 262 0 1906 106 31 0 chr20 208224 208480 -71945402 - AluSq SINE Alu -49 264 1 337 143 14 0 chr20 208770 208840 -71945042 - L1MD2 LINE L1 0 6359 6289 2174 113 0 39 chr20 208841 209152 -71944730 + AluSx SINE Alu 1 299 -13 255 125 0 0 chr20 209152 209192 -71944690 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 4873 210 13 37 chr20 209215 210253 -71943629 - L1MC4a LINE L1 -27 7781 6720 2073 113 70 0 chr20 210253 210537 -71943345 + AluSx SINE Alu 1 304 -8 4873 210 13 37 chr20 210537 210919 -71942963 - L1MC4a LINE L1 -1088 6720 4825 297 232 11 11 chr20 211367 211462 -71942420 + MER20B DNA MER1_type 653 747 -36 465 230 141 1 chr20 211462 211591 -71942291 - MIR SINE MIR -62 146 40 1415 272 25 31 chr20 211636 212081 -71941801 + MLT1J2 LTR MaLR 1 442 -8 576 278 119 16 chr20 212315 212509 -71941373 + MIR SINE MIR 49 262 0 243 268 134 0 chr20 212683 212765 -71941117 - MIR SINE MIR -73 135 43 189 0 0 0 chr20 213170 213191 -71940691 + (T)n Simple_repeat Simple_repeat 1 21 0 1566 196 206 141 chr20 213462 213845 -71940037 + L2 LINE L2 1277 1634 -1680 687 228 0 24 chr20 213845 214012 -71939870 + AluJb SINE Alu 136 298 -14 1566 196 206 141 chr20 214012 214661 -71939221 + L2 LINE L2 1634 2553 -761 2417 88 0 13 chr20 215126 215433 -71938449 + AluSq SINE Alu 1 303 -10 803 268 78 70 chr20 215445 215922 -71937960 + MLT1L LTR MaLR 3 488 -127 1566 199 10 30 chr20 215922 216219 -71937663 + AluJo SINE Alu 1 291 -21 803 268 78 70 chr20 216219 216345 -71937537 + MLT1L LTR MaLR 488 611 -4 508 237 21 82 chr20 216355 216549 -71937333 + MLT1J LTR MaLR 330 511 0 2403 91 3 0 chr20 216680 216977 -71936905 - AluSp SINE Alu -15 298 1 784 301 96 16 chr20 217824 218368 -71935514 + L1M4 LINE L1 4117 4703 -1443 466 304 72 24 chr20 218383 218590 -71935292 + MER102a DNA MER1_type 108 324 -6 236 361 9 0 chr20 218739 218847 -71935035 - L2 LINE L2 -2482 832 724 2565 50 3 0 chr20 218998 219300 -71934582 + AluY SINE Alu 1 303 -8 266 222 198 24 chr20 219339 219465 -71934417 + MIR SINE MIR 96 243 -19 23 0 0 0 chr20 220117 220140 -71933742 + GC_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr20 220249 220278 -71933604 + GC_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr20 220407 220446 -71933436 + GC_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr20 220651 220679 -71933203 + GC_rich Low_complexity Low_complexity 1 28 0 276 329 13 0 chr20 221774 221853 -71932029 + L2 LINE L2 3185 3264 -8 591 280 32 11 chr20 222093 222282 -71931600 - MIR3 SINE MIR 0 208 16 230 353 39 0 chr20 223126 223228 -71930654 + MER5B DNA MER1_type 66 171 -7 2373 93 0 0 chr20 224288 224579 -71929303 - AluSx SINE Alu -21 291 1 336 320 69 46 chr20 224607 224782 -71929100 - L2 LINE L2 -221 3051 2873 321 265 247 0 chr20 224878 225048 -71928834 - L2 LINE L2 0 3313 3102 947 326 64 29 chr20 225805 226364 -71927518 - L2 LINE L2 -513 2801 2223 595 212 72 63 chr20 226365 226587 -71927295 + MER112 DNA MER1_type 3 226 -34 322 319 47 0 chr20 226665 226834 -71927048 - L2 LINE L2 -1216 2098 1922 2582 44 7 0 chr20 226835 227130 -71926752 + AluY SINE Alu 1 297 -14 1535 132 0 14 chr20 227485 227697 -71926185 + AluSx SINE Alu 1 209 -103 4257 110 41 58 chr20 227763 228526 -71925356 + LTR1 LTR ERV1 36 785 0 598 106 0 21 chr20 228528 228622 -71925260 + AluSx SINE Alu 208 299 -13 1063 167 0 6 chr20 228842 229010 -71924872 - AluJo/FRAM SINE Alu -17 295 129 2307 60 0 106 chr20 229013 229361 -71924521 - AluY SINE Alu 0 311 1 476 176 0 38 chr20 229361 229492 -71924390 + CT-rich Low_complexity Low_complexity 1 126 0 760 201 145 52 chr20 229494 229743 -71924139 - AluJo SINE Alu 0 312 41 422 240 42 152 chr20 229772 229989 -71923893 + L1MC4a LINE L1 5834 6026 -1782 1741 165 33 0 chr20 230203 230508 -71923374 + AluJb SINE Alu 1 314 0 509 303 90 31 chr20 230763 231120 -71922762 + L2 LINE L2 2934 3311 -2 1553 269 95 15 chr20 231488 232034 -71921848 + MER115 DNA AcHobo 89 678 -15 475 248 65 13 chr20 232041 232194 -71921688 + MIR SINE MIR 63 223 -39 472 245 123 42 chr20 232346 232558 -71921324 - MIR SINE MIR -1 261 33 221 143 0 41 chr20 232732 232781 -71921101 + (TCCC)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr20 233326 233347 -71920535 + AT_rich Low_complexity Low_complexity 1 21 0 319 108 96 48 chr20 233861 233944 -71919938 - L1MC3 LINE L1 -6 7779 7693 1437 164 0 0 chr20 233949 234174 -71919708 - AluJb SINE Alu -4 308 84 885 157 8 111 chr20 234178 234413 -71919469 - L1MC3 LINE L1 -100 7685 7475 286 282 35 0 chr20 234488 234573 -71919309 - MLT1F1 LTR MaLR -443 124 37 2206 122 66 34 chr20 234574 234983 -71918899 - L1MC3 LINE L1 -687 7098 6677 213 39 0 0 chr20 234984 235010 -71918872 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 282 191 0 0 chr20 235010 235057 -71918825 - Alu SINE Alu -11 290 244 269 160 0 0 chr20 235170 235220 -71918662 + MER97a DNA MER1_type? 45 94 -800 1401 150 8 43 chr20 235222 235456 -71918426 - AluJo SINE Alu -86 226 1 3095 178 64 31 chr20 235457 235861 -71918021 - L1MC3 LINE L1 -1093 6692 6303 2123 128 0 28 chr20 235861 236181 -71917701 - AluJb SINE Alu -1 311 1 3095 178 64 31 chr20 236181 236405 -71917477 - L1MC3 LINE L1 -1482 6303 5745 249 225 144 38 chr20 236405 236565 -71917317 - L1MB5 LINE L1 -122 6052 5876 210 268 98 18 chr20 236572 236684 -71917198 - MIR SINE MIR -69 193 73 927 181 23 0 chr20 236755 236926 -71916956 - FAM SINE Alu 0 175 1 240 232 18 18 chr20 236929 236985 -71916897 - Charlie5 DNA MER1_type -2547 65 10 2276 107 0 0 chr20 236993 237282 -71916600 - AluSc SINE Alu -20 289 1 904 179 0 0 chr20 237328 237473 -71916409 + FRAM SINE Alu 21 165 -11 1831 140 49 3 chr20 237509 237794 -71916088 - AluJo SINE Alu -5 307 10 2259 122 3 0 chr20 237797 238109 -71915773 - AluSp SINE Alu 0 313 1 2014 106 33 0 chr20 238334 238639 -71915243 - AluY SINE Alu 0 314 1 1936 149 17 3 chr20 238648 238937 -71914945 - AluJo SINE Alu -19 293 1 2040 128 12 53 chr20 238937 239336 -71914546 + L1MB8 LINE L1 5790 6172 -6 1934 150 3 14 chr20 239516 239810 -71914072 + AluJo SINE Alu 1 291 -21 498 296 18 6 chr20 239916 240085 -71913797 - L2 LINE L2 -252 3061 2891 438 240 7 52 chr20 240123 240153 -71913729 + L1ME LINE L1 5639 5669 -452 2190 112 11 0 chr20 240153 240280 -71913602 + AluSc SINE Alu 1 125 -184 2389 69 0 23 chr20 240280 240583 -71913299 + AluY SINE Alu 1 296 -15 2190 112 11 0 chr20 240583 240742 -71913140 + AluSc SINE Alu 125 290 -19 438 240 7 52 chr20 240742 240841 -71913041 + L1ME LINE L1 5669 5763 -358 1926 122 4 0 chr20 240841 241103 -71912779 + AluSq SINE Alu 35 297 -16 438 240 7 52 chr20 241103 241126 -71912756 + L1ME LINE L1 5763 5785 -336 1901 170 0 3 chr20 241277 241571 -71912311 + AluJb SINE Alu 1 293 -19 2265 98 0 17 chr20 241571 241868 -71912014 + AluSg SINE Alu 1 292 -18 2275 80 4 0 chr20 241968 242243 -71911639 + AluSx SINE Alu 1 276 -36 357 43 0 0 chr20 242243 242290 -71911592 + (CA)n Simple_repeat Simple_repeat 1 47 0 2262 110 3 0 chr20 242586 242878 -71911004 + AluSg SINE Alu 1 293 -17 2685 199 26 17 chr20 243044 243586 -71910296 - MLT1F1 LTR MaLR 0 567 21 2495 59 0 13 chr20 243587 243894 -71909988 + AluY SINE Alu 1 303 -8 571 269 161 34 chr20 244203 244349 -71909533 + L2 LINE L2 2911 3037 -276 1954 162 10 0 chr20 244349 244651 -71909231 - AluJb SINE Alu -7 305 1 571 269 161 34 chr20 244651 244666 -71909216 + L2 LINE L2 3037 3049 -264 1640 174 8 0 chr20 244666 244931 -71908951 - AluJo SINE Alu -45 267 1 571 269 161 34 chr20 244931 245121 -71908761 + L2 LINE L2 3049 3308 -5 1610 167 41 11 chr20 245389 245689 -71908193 - AluJb SINE Alu 0 314 7 1984 127 39 7 chr20 246153 246436 -71907446 - AluSx SINE Alu -16 296 5 402 258 86 0 chr20 246450 246578 -71907304 - MIR SINE MIR -14 248 110 33 85 0 0 chr20 248071 248153 -71905729 + GC_rich Low_complexity Low_complexity 1 82 0 33 25 0 0 chr20 248173 248213 -71905669 + GC_rich Low_complexity Low_complexity 1 40 0 31 26 0 0 chr20 248408 248446 -71905436 + GC_rich Low_complexity Low_complexity 1 38 0 30 69 0 0 chr20 248569 248627 -71905255 + GC_rich Low_complexity Low_complexity 1 58 0 22 56 0 0 chr20 248881 248917 -71904965 + GC_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr20 248998 249021 -71904861 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr20 249160 249185 -71904697 + GC_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr20 249199 249234 -71904648 + (GGA)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr20 251127 251147 -71902735 + (T)n Simple_repeat Simple_repeat 1 20 0 579 248 189 4 chr20 251495 251765 -71902117 - MER102b DNA MER1_type -1 340 21 285 254 295 8 chr20 251802 251924 -71901958 + MIR SINE MIR 16 172 -90 706 264 100 47 chr20 252536 252877 -71901005 + LTR16A LTR ERVL 92 450 0 186 179 0 0 chr20 253212 253251 -71900631 + MIR SINE MIR 81 119 -89 1992 171 51 127 chr20 253561 254014 -71899868 - MLT1E1 LTR MaLR 0 654 273 2436 90 3 3 chr20 254014 254325 -71899557 + AluSx SINE Alu 1 311 -1 1992 171 51 127 chr20 254325 254579 -71899303 - MLT1E1 LTR MaLR -381 273 1 1029 174 0 34 chr20 254579 254755 -71899127 + AluJo SINE Alu 22 189 -123 1558 259 121 50 chr20 254760 255423 -71898459 + L2 LINE L2 2223 2982 -331 2062 123 3 7 chr20 255423 255724 -71898158 + AluSx SINE Alu 1 300 -12 1558 259 121 50 chr20 255724 255986 -71897896 + L2 LINE L2 2982 3224 -89 1770 148 7 20 chr20 256047 256345 -71897537 + AluJo SINE Alu 1 294 -18 319 364 52 44 chr20 256363 256613 -71897269 - L2 LINE L2 -26 3246 2995 1541 237 205 20 chr20 256613 257111 -71896771 + MLT1G LTR MaLR 1 590 0 829 173 0 0 chr20 257324 257457 -71896425 - FLAM_C SINE Alu 0 133 1 2134 121 0 0 chr20 257466 257763 -71896119 - AluSx SINE Alu -15 297 1 189 324 141 0 chr20 257765 257836 -71896046 + L2 LINE L2 2693 2773 -541 436 185 7 104 chr20 257989 258073 -71895809 + MIR3 SINE MIR 84 152 -56 2201 115 0 6 chr20 258073 258386 -71895496 - AluSx SINE Alu -1 311 1 436 185 7 104 chr20 258386 258436 -71895446 + MIR3 SINE MIR 152 205 -3 1214 56 11 11 chr20 258779 258957 -71894925 + (TTC)n Simple_repeat Simple_repeat 3 180 0 232 193 20 20 chr20 258968 258987 -71894895 - Alu SINE Alu -263 40 22 1666 109 4 0 chr20 258987 259225 -71894657 - AluSg/x SINE Alu 0 310 72 232 193 20 20 chr20 259225 259265 -71894617 - Alu SINE Alu -280 23 1 1887 146 0 10 chr20 259267 259568 -71894314 - AluSx SINE Alu -14 298 1 267 133 22 0 chr20 259568 259613 -71894269 - U6 snRNA snRNA -61 46 1 716 260 0 17 chr20 259655 259836 -71894046 - L2 LINE L2 0 3313 3136 476 239 89 33 chr20 259905 260085 -71893797 - LTR33A LTR ERVL -332 191 2 2225 78 3 0 chr20 260177 260459 -71893423 + AluSp SINE Alu 1 283 -30 4068 168 12 12 chr20 260513 261025 -71892857 - L1MB3 LINE L1 -11 6172 5658 1718 147 56 0 chr20 261025 261187 -71892695 - AluSx SINE Alu -11 301 115 390 21 0 0 chr20 261187 261234 -71892648 + (TG)n Simple_repeat Simple_repeat 2 48 0 1718 147 56 0 chr20 261234 261356 -71892526 - AluSx SINE Alu -197 115 1 4068 168 12 12 chr20 261356 261570 -71892312 - L1MB3 LINE L1 -524 5659 5446 1541 154 0 8 chr20 261616 261863 -71892019 - AluJo SINE Alu -47 265 21 2056 117 3 0 chr20 261939 262229 -71891653 + AluSq SINE Alu 1 291 -22 1229 91 24 62 chr20 262596 262806 -71891076 - AluSc SINE Alu -14 295 94 337 0 41 20 chr20 262806 262855 -71891027 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 1967 134 40 0 chr20 262860 263158 -71890724 - AluSx SINE Alu 0 312 3 664 317 66 8 chr20 263282 263525 -71890357 - MIR SINE MIR 0 262 6 195 162 0 0 chr20 263722 263759 -71890123 + (CA)n Simple_repeat Simple_repeat 1 37 0 247 305 98 18 chr20 263800 263964 -71889918 + L2 LINE L2 1853 2029 -1285 368 141 16 0 chr20 264115 264179 -71889703 - AluJo SINE Alu -3 299 235 901 159 0 59 chr20 264179 264349 -71889533 - AluJo SINE Alu -152 160 1 741 237 133 37 chr20 264349 264807 -71889075 + MLT1G LTR MaLR 19 538 -4 976 236 167 25 chr20 264816 265134 -71888748 - MLT1A1 LTR MaLR -2 363 1 2326 97 0 3 chr20 265215 265526 -71888356 - AluSg SINE Alu 0 310 1 1235 275 154 9 chr20 265526 265974 -71887908 + MLT1K LTR MaLR 34 546 -42 300 70 0 0 chr20 266195 266238 -71887644 + (TC)n Simple_repeat Simple_repeat 1 43 0 2296 77 0 13 chr20 266424 266724 -71887158 + AluSc SINE Alu 1 296 -13 309 423 621 0 chr20 266839 267009 -71886873 - L1MC4a LINE L1 -302 5819 5795 2192 211 42 84 chr20 267009 267257 -71886625 - MLT1G LTR MaLR 0 590 333 1841 85 8 0 chr20 267257 267505 -71886377 - AluSx SINE Alu -62 250 1 2192 211 42 84 chr20 267505 267872 -71886010 - MLT1G LTR MaLR -257 333 1 309 423 621 0 chr20 267872 267934 -71885948 - L1MC4a LINE L1 -326 5795 5685 582 338 87 0 chr20 267934 268200 -71885682 + L2 LINE L2 2564 2852 -462 276 30 0 0 chr20 268242 268275 -71885607 + (CA)n Simple_repeat Simple_repeat 1 33 0 188 167 103 90 chr20 268275 268353 -71885529 + MIR SINE MIR 184 262 0 278 240 27 13 chr20 268364 268439 -71885443 - L2 LINE L2 -9 3304 3229 2068 134 0 6 chr20 268452 268766 -71885116 + AluJb SINE Alu 1 312 0 196 379 0 0 chr20 268896 268962 -71884920 - MIR SINE MIR -85 123 58 22 35 0 0 chr20 269663 269692 -71884190 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 270493 270514 -71883368 + GC_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 271094 271138 -71882744 + (TG)n Simple_repeat Simple_repeat 2 45 0 587 341 0 0 chr20 271811 271978 -71881904 - MIR SINE MIR -83 179 13 236 210 48 0 chr20 272002 272064 -71881818 - MIR SINE MIR -11 251 187 228 222 25 62 chr20 272534 272615 -71881267 - MLT1K LTR MaLR -1 587 510 2118 109 3 10 chr20 272677 272802 -71881080 + AluSx SINE Alu 11 135 -177 2106 105 0 20 chr20 272802 273108 -71880774 + AluSg SINE Alu 1 300 -10 2118 109 3 10 chr20 273108 273286 -71880596 + AluSx SINE Alu 135 312 0 1995 126 0 0 chr20 273576 273861 -71880021 + AluSq SINE Alu 21 305 -8 1860 159 10 0 chr20 273874 274170 -71879712 + AluJo SINE Alu 13 311 -1 709 228 95 4 chr20 274188 274429 -71879453 + L1M4 LINE L1 4363 4625 -1521 185 129 0 0 chr20 274434 274465 -71879417 + L2 LINE L2 3023 3053 -260 279 319 129 0 chr20 274596 274712 -71879170 - MLT1K LTR MaLR -290 298 168 273 204 86 32 chr20 275097 275190 -71878692 - L2 LINE L2 -16 3256 3159 619 250 42 118 chr20 275205 275537 -71878345 - L2 LINE L2 0 3272 2966 235 308 13 0 chr20 276531 276609 -71877273 + MIR3 SINE MIR 82 160 -48 214 294 98 10 chr20 276813 276915 -71876967 - MIR SINE MIR -62 146 36 364 282 114 0 chr20 277536 277609 -71876273 - MIR SINE MIR -20 242 179 2157 109 3 0 chr20 277609 277913 -71875969 - AluSx SINE Alu -5 307 3 364 282 114 0 chr20 277913 277970 -71875912 - MIR SINE MIR -83 179 97 2269 64 0 58 chr20 277978 278307 -71875575 - AluY SINE Alu -1 310 1 1871 135 22 16 chr20 278317 278629 -71875253 - L1PB2 LINE L1 0 6151 5838 2238 100 0 0 chr20 278670 278969 -71874913 + AluSx SINE Alu 1 299 -13 334 277 25 34 chr20 279139 279258 -71874624 - MIR SINE MIR 0 262 145 * 1486 248 109 53 chr20 279250 280039 -71873843 + L2 LINE L2 2240 3074 -239 2278 97 3 0 chr20 280043 280354 -71873528 + AluSp SINE Alu 1 312 -1 2133 121 0 0 chr20 280366 280664 -71873218 + AluSx SINE Alu 1 298 -14 280 240 146 12 chr20 280689 280864 -71873018 + L1ME LINE L1 5571 5783 -338 1237 122 148 97 chr20 280865 281143 -71872739 + AluJo SINE Alu 1 292 -20 2048 101 50 0 chr20 281176 281474 -71872408 - AluSp SINE Alu 0 313 1 1006 146 5 61 chr20 281477 281632 -71872250 + L1MD3 LINE L1 7077 7218 -777 728 181 0 8 chr20 281632 281759 -71872123 - FLAM_A SINE Alu -7 126 1 1006 146 5 61 chr20 281759 281816 -71872066 + L1MD3 LINE L1 7218 7277 -718 640 240 0 0 chr20 281817 281942 -71871940 + MLT1F1 LTR MaLR 1 125 -442 1501 176 95 0 chr20 281942 282238 -71871644 + L1MD3 LINE L1 7404 7727 -268 406 200 20 59 chr20 282222 282323 -71871559 + L1MD3 LINE L1 6260 6351 -8 * 2278 96 0 0 chr20 282326 282627 -71871255 + AluSx SINE Alu 1 301 -11 2180 84 7 10 chr20 283020 283317 -71870565 - AluSp SINE Alu -17 296 1 401 275 101 57 chr20 283483 283664 -71870218 + MIR SINE MIR 67 262 0 257 364 11 0 chr20 283712 283800 -71870082 - L2 LINE L2 -68 3204 3116 584 308 87 0 chr20 283877 284072 -71869810 - MIR SINE MIR -21 241 30 2179 104 19 10 chr20 284512 284821 -71869061 + AluSx SINE Alu 1 312 0 255 294 176 0 chr20 284821 284923 -71868959 - MIR3 SINE MIR -85 123 4 197 222 16 0 chr20 285482 285545 -71868337 + (TGAA)n Simple_repeat Simple_repeat 3 66 0 1645 149 34 0 chr20 285563 285859 -71868023 - AluJb SINE Alu 0 311 7 250 327 73 0 chr20 285869 285979 -71867903 - L2 LINE L2 0 3272 3155 227 269 0 0 chr20 286094 286146 -71867736 + (TG)n Simple_repeat Simple_repeat 1 52 0 275 263 111 0 chr20 286580 286679 -71867203 + MIR SINE MIR 81 190 -72 1048 252 87 47 chr20 286955 287088 -71866794 - L2 LINE L2 -1 3312 3186 2059 115 0 10 chr20 287088 287392 -71866490 + AluSx SINE Alu 1 301 -11 1048 252 87 47 chr20 287392 287682 -71866200 - L2 LINE L2 -127 3186 2872 592 304 40 9 chr20 288367 288404 -71865478 + L1MC4a LINE L1 5406 5440 -2368 2160 83 0 14 chr20 288404 288694 -71865188 - AluSq SINE Alu -4 309 24 592 304 40 9 chr20 288694 288883 -71864999 + L1MC4a LINE L1 5440 5639 -2169 588 82 0 0 chr20 288921 289020 -71864862 + AluSp/q SINE Alu 211 309 0 774 259 50 29 chr20 289020 289314 -71864568 + L1MC4a LINE L1 5628 5945 -297 236 63 32 79 chr20 289460 289523 -71864359 + (TATAA)n Simple_repeat Simple_repeat 4 63 0 2105 91 0 7 chr20 289538 289860 -71864022 + AluSp SINE Alu 3 322 0 220 329 0 14 chr20 289968 290041 -71863841 + MIR SINE MIR 42 113 -95 2714 247 146 37 chr20 290354 290493 -71863389 + L2 LINE L2 1693 1815 -1498 1989 130 3 0 chr20 290493 290777 -71863105 - AluJb SINE Alu -27 285 1 2714 247 146 37 chr20 290777 290885 -71862997 + L2 LINE L2 1815 1910 -1403 2284 97 0 3 chr20 290885 291193 -71862689 - AluSc SINE Alu -2 307 1 2714 247 146 37 chr20 291193 291846 -71862036 + L2 LINE L2 1910 2491 -822 763 197 0 29 chr20 291846 291983 -71861899 + AluJo/FLAM SINE Alu 1 133 -169 2247 95 3 3 chr20 291985 292290 -71861592 + AluSx SINE Alu 1 305 -7 2714 247 146 37 chr20 292290 292705 -71861177 + L2 LINE L2 2491 2859 -454 1835 162 0 3 chr20 292705 293007 -71860875 - AluJb SINE Alu -11 301 1 2714 247 146 37 chr20 293007 293134 -71860748 + L2 LINE L2 2859 3313 0 614 264 35 25 chr20 293310 293507 -71860375 - L2 LINE L2 -1 3312 3114 225 83 0 0 chr20 294732 294768 -71859114 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 534 277 40 30 chr20 295100 295152 -71858730 + MIR SINE MIR 11 61 -201 2004 107 21 0 chr20 295152 295433 -71858449 + AluSx SINE Alu 1 287 -25 534 277 40 30 chr20 295433 295582 -71858300 + MIR SINE MIR 61 214 -48 306 220 0 77 chr20 295692 295783 -71858099 - MIR SINE MIR 0 262 179 1044 174 0 0 chr20 295808 295975 -71857907 + AluJb SINE Alu 137 303 -9 192 77 0 0 chr20 295976 296002 -71857880 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 324 316 86 7 chr20 296027 296166 -71857716 - MIR SINE MIR -85 177 28 * 396 279 105 23 chr20 296112 296284 -71857598 + MIR SINE MIR 11 196 -66 955 270 15 68 chr20 296588 296627 -71857255 + MER113 DNA MER1_type? 73 113 -408 275 48 0 24 chr20 296627 296669 -71857213 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1913 147 0 0 chr20 296669 296948 -71856934 - AluSx SINE Alu -33 279 1 955 270 15 68 chr20 296948 297191 -71856691 + MER113 DNA MER1_type? 112 366 -155 2054 88 36 20 chr20 297191 297311 -71856571 + AluY SINE Alu 1 118 -193 186 43 0 0 chr20 297311 297334 -71856548 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2054 88 36 20 chr20 297334 297519 -71856363 + AluY SINE Alu 118 311 0 955 270 15 68 chr20 297519 297538 -71856344 + MER113 DNA MER1_type? 366 384 -137 2233 98 3 0 chr20 297538 297844 -71856038 + AluY SINE Alu 1 307 -4 955 270 15 68 chr20 297844 298013 -71855869 + MER113 DNA MER1_type? 384 521 0 301 284 17 60 chr20 298022 298138 -71855744 - MIR3 SINE MIR -48 160 50 1906 132 0 16 chr20 298351 298686 -71855196 + AluSx SINE Alu 1 312 0 612 203 23 0 chr20 298856 298984 -71854898 - MIR SINE MIR -44 218 88 250 280 40 0 chr20 299038 299113 -71854769 - MIR SINE MIR -68 194 117 2349 147 45 33 chr20 299248 299670 -71854212 - MSTC LTR MaLR -1 427 1 378 197 0 51 chr20 299670 299757 -71854125 + Charlie5 DNA MER1_type 18 99 -2525 2159 119 0 0 chr20 299757 300060 -71853822 - AluSg SINE Alu -7 303 1 378 197 0 51 chr20 300060 300089 -71853793 + Charlie5 DNA MER1_type 99 128 -2496 210 256 93 116 chr20 300236 300282 -71853600 + MIR SINE MIR 24 70 -192 2201 98 7 3 chr20 300282 300588 -71853294 - AluSq SINE Alu -6 307 1 210 256 93 116 chr20 300588 300670 -71853212 + MIR SINE MIR 70 149 -113 312 323 31 0 chr20 300887 300983 -71852899 + L2 LINE L2 3136 3234 -38 1825 138 7 3 chr20 301299 301613 -71852269 - AluY SINE Alu 0 315 1 1547 199 13 0 chr20 301623 301930 -71851952 - AluJo SINE Alu -1 311 1 2292 86 10 0 chr20 301997 302298 -71851584 + AluSp SINE Alu 1 304 -9 794 308 43 0 chr20 302424 302658 -71851224 - MIR SINE MIR -17 245 2 222 320 78 39 chr20 302924 303014 -71850868 - MIR SINE MIR -64 198 100 2564 30 3 0 chr20 303014 303318 -71850564 + AluY SINE Alu 1 305 -6 222 320 78 39 chr20 303318 303355 -71850527 - MIR SINE MIR -162 100 66 21 0 0 0 chr20 303428 303449 -71850433 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 303738 303759 -71850123 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr20 303807 303844 -71850038 + GC_rich Low_complexity Low_complexity 1 37 0 267 31 0 0 chr20 304709 304741 -71849141 + (TG)n Simple_repeat Simple_repeat 1 32 0 530 282 56 39 chr20 305199 305433 -71848449 - MIR SINE MIR -2 260 23 675 272 75 54 chr20 305773 306049 -71847833 - L1MC4a LINE L1 -1924 5884 5597 1413 196 41 0 chr20 306049 306349 -71847533 - AluJo SINE Alu 0 311 1 675 272 75 54 chr20 306349 306420 -71847462 - L1MC4a LINE L1 -2211 5597 5529 270 304 131 52 chr20 306543 306897 -71846985 + L2 LINE L2 2395 2720 -594 1415 247 122 26 chr20 306897 306966 -71846916 - MLT1J LTR MaLR 0 511 450 2310 98 0 0 chr20 306966 307271 -71846611 - AluSc SINE Alu -4 305 1 1415 247 122 26 chr20 307271 307667 -71846215 - MLT1J LTR MaLR -61 450 1 270 304 131 52 chr20 307667 307713 -71846169 + L2 LINE L2 2720 2761 -553 2306 97 0 0 chr20 307713 308022 -71845860 - AluSp SINE Alu -4 309 1 270 304 131 52 chr20 308022 308117 -71845765 + L2 LINE L2 2761 2930 -384 744 181 103 0 chr20 308137 308292 -71845590 + MER5A DNA MER1_type 19 189 0 332 314 48 8 chr20 308317 308441 -71845441 + L2 LINE L2 2985 3113 -159 1747 148 20 33 chr20 308470 308773 -71845109 - AluJb SINE Alu -13 299 1 1203 102 0 0 chr20 309028 309185 -71844697 - AluSg/x SINE Alu -22 288 132 1931 103 4 0 chr20 309185 309448 -71844434 - AluSg SINE Alu -15 295 32 1198 111 0 12 chr20 309488 309660 -71844222 - AluSg SINE Alu -140 170 1 1216 187 21 17 chr20 309703 309938 -71843944 + AluJo SINE Alu 1 236 -76 1081 277 34 47 chr20 309995 310056 -71843826 - L1MC4a LINE L1 -1838 5970 5910 596 163 106 41 chr20 310056 310179 -71843703 + FLAM_A SINE Alu 1 131 -2 1081 277 34 47 chr20 310179 310561 -71843321 - L1MC4a LINE L1 -1898 5910 5533 355 317 42 6 chr20 311172 311339 -71842543 - L2 LINE L2 -264 3008 2836 302 299 0 21 chr20 311453 311550 -71842332 - MIR3 SINE MIR -33 175 81 611 291 27 18 chr20 311712 311932 -71841950 - MIR SINE MIR -19 243 22 406 255 161 0 chr20 312505 312654 -71841228 - L2 LINE L2 0 3313 3141 2369 84 0 3 chr20 312654 312964 -71840918 + AluSq SINE Alu 1 309 -4 494 270 172 47 chr20 313298 313329 -71840553 + MIR SINE MIR 5 31 -231 2249 108 0 0 chr20 313329 313634 -71840248 + AluSx SINE Alu 1 305 -7 494 270 172 47 chr20 313634 313817 -71840065 + MIR SINE MIR 31 246 -16 2286 97 0 0 chr20 314349 314647 -71839235 + AluSx SINE Alu 1 298 -14 750 163 81 12 chr20 314758 314918 -71838964 - MIR SINE MIR -74 188 18 197 256 125 0 chr20 314954 315028 -71838854 + MIR SINE MIR 73 156 -52 2081 123 0 3 chr20 315167 315467 -71838415 - AluSx SINE Alu -13 299 1 2607 192 88 40 chr20 315647 315947 -71837935 - L1MC4a LINE L1 0 7808 7524 1824 133 54 0 chr20 315947 316226 -71837656 - AluJo SINE Alu -18 294 1 2607 192 88 40 chr20 316226 316628 -71837254 - L1MC4a LINE L1 -284 7524 7072 2141 101 47 0 chr20 316628 316924 -71836958 - AluSg SINE Alu 0 310 1 1929 152 3 7 chr20 317122 317425 -71836457 + AluJo SINE Alu 11 312 0 486 248 36 15 chr20 317433 317570 -71836312 + MIR3 SINE MIR 6 145 -63 2047 117 3 7 chr20 317772 318070 -71835812 - AluJb SINE Alu -15 297 1 261 246 58 0 chr20 318597 318666 -71835216 + MIR SINE MIR 72 144 -118 405 228 22 11 chr20 319480 319572 -71834310 - L2 LINE L2 -24 3289 3197 336 243 37 37 chr20 320389 320525 -71833357 - MLT1L LTR MaLR -48 567 432 993 201 56 26 chr20 320618 320852 -71833030 + MIR SINE MIR 12 252 -10 2209 66 3 30 chr20 320858 321160 -71832722 + AluSg SINE Alu 1 294 -16 379 236 22 0 chr20 321193 321282 -71832600 - MLT1L LTR MaLR -344 271 181 416 208 27 167 chr20 321427 321580 -71832302 + MLT1H LTR MaLR 360 474 -75 2237 81 0 28 chr20 321580 321900 -71831982 - AluSx SINE Alu -1 311 1 416 208 27 167 chr20 321900 321967 -71831915 + MLT1H LTR MaLR 474 549 0 336 333 56 0 chr20 322208 322316 -71831566 - MIR SINE MIR -69 193 80 2236 91 0 0 chr20 322416 322713 -71831169 + AluSx SINE Alu 1 297 -15 303 266 245 29 chr20 322944 323083 -71830799 - L2 LINE L2 0 3272 3104 295 197 167 0 chr20 323149 323215 -71830667 + MLT1J2 LTR MaLR 67 143 -307 341 235 136 15 chr20 323290 323422 -71830460 + MLT1J2 LTR MaLR 299 446 -4 469 284 297 3 chr20 323510 323823 -71830059 - MLT1H LTR MaLR -72 477 73 3152 159 23 14 chr20 323850 324016 -71829866 - MER44D DNA MER2_type -1882 705 542 2450 75 0 0 chr20 324016 324324 -71829558 + AluSc SINE Alu 1 308 -1 3152 159 23 14 chr20 324324 324773 -71829109 - MER44D DNA MER2_type -2045 542 8 778 93 0 0 chr20 325011 325118 -71828764 + AluSp/q SINE Alu 207 313 0 1493 143 42 23 chr20 325124 325389 -71828493 - AluJo SINE Alu -31 281 12 460 289 102 0 chr20 325407 325573 -71828309 + MER5A DNA MER1_type 7 189 0 608 235 184 0 chr20 325789 325985 -71827897 + L2 LINE L2 3082 3313 0 218 328 0 0 chr20 326044 326105 -71827777 - MIR SINE MIR -19 243 183 2454 206 23 15 chr20 326114 326637 -71827245 + MLT1F LTR MaLR 16 542 0 511 268 33 13 chr20 326638 326791 -71827091 - MIR SINE MIR -78 184 29 624 290 65 81 chr20 326952 327052 -71826830 + L1MEd LINE L1 800 900 -5305 2064 101 0 10 chr20 327052 327350 -71826532 + AluSq SINE Alu 1 295 -18 624 290 65 81 chr20 327350 327483 -71826399 + L1MEd LINE L1 900 1034 -5171 2137 89 0 7 chr20 327483 327765 -71826117 + AluSq SINE Alu 1 280 -33 288 0 0 0 chr20 327765 327797 -71826085 + (CA)n Simple_repeat Simple_repeat 1 32 0 624 290 65 81 chr20 327797 327871 -71826011 + L1MEd LINE L1 1032 1104 -5101 361 223 210 64 chr20 327868 328025 -71825857 + L1MEd LINE L1 1333 1512 -4884 * 285 147 35 198 chr20 328048 328164 -71825718 + L1MB7 LINE L1 5814 5910 -264 498 92 0 0 chr20 328174 328239 -71825643 - AluJb SINE Alu -20 292 228 1129 119 0 0 chr20 328239 328398 -71825484 - AluJb SINE Alu -149 163 5 1028 178 40 36 chr20 328403 328541 -71825341 + L1MB7 LINE L1 5909 6045 -139 2050 148 0 0 chr20 328541 328852 -71825030 - AluSx SINE Alu -1 311 1 1028 178 40 36 chr20 328852 328988 -71824894 + L1MB7 LINE L1 6045 6184 0 1521 127 107 8 chr20 329089 329342 -71824540 + AluJo SINE Alu 29 306 -6 233 186 0 0 chr20 329346 329389 -71824493 - MER5B DNA MER1_type -135 43 1 1010 296 125 23 chr20 329447 330188 -71823694 - L2 LINE L2 0 3313 2476 192 310 36 0 chr20 330326 330435 -71823447 + MIR SINE MIR 80 140 -68 405 50 30 69 chr20 330543 330644 -71823238 + (CCCCG)n Simple_repeat Simple_repeat 2 98 0 788 278 200 10 chr20 331711 332218 -71821664 + L2 LINE L2 2698 3313 0 259 326 0 11 chr20 332285 332374 -71821508 - L2 LINE L2 -213 3059 2972 471 303 58 0 chr20 332690 332845 -71821037 + MIR SINE MIR 19 182 -80 604 293 156 50 chr20 332897 333256 -71820626 - MLT1J LTR MaLR -88 423 27 181 262 131 0 chr20 333272 333333 -71820549 + MIR SINE MIR 179 247 -15 4388 162 44 39 chr20 333444 333807 -71820075 - L1MB7 LINE L1 0 6184 5824 1455 191 23 43 chr20 333807 333961 -71819921 - AluJo SINE Alu -19 293 146 2324 64 0 3 chr20 333961 334257 -71819625 - AluY SINE Alu -16 295 1 1455 191 23 43 chr20 334257 334401 -71819481 - AluJo SINE Alu -166 146 1 4388 162 44 39 chr20 334401 334910 -71818972 - L1MB7 LINE L1 -360 5824 5319 2127 100 10 3 chr20 334910 335209 -71818673 - AluSx SINE Alu -11 301 1 4388 162 44 39 chr20 335209 336011 -71817871 - L1MB7 LINE L1 -865 5319 4515 342 200 111 22 chr20 336014 336104 -71817778 - HAL1b LINE L1 -442 906 809 203 250 0 0 chr20 336249 336289 -71817593 + MER5A DNA MER1_type 70 109 -80 1261 209 62 4 chr20 336750 337008 -71816874 + AluJb SINE Alu 30 302 -10 337 214 125 0 chr20 337491 337603 -71816279 - HAL1 LINE L1 -838 1669 1544 643 250 122 39 chr20 337603 337684 -71816198 - L1MC5 LINE L1 -176 7785 7712 1676 174 27 3 chr20 337684 337982 -71815900 + AluJo SINE Alu 1 305 -7 643 250 122 39 chr20 337982 338266 -71815616 - L1MC5 LINE L1 -249 7712 7376 2098 174 62 10 chr20 338266 338669 -71815213 - MSTA LTR MaLR 0 428 5 643 250 122 39 chr20 338669 338738 -71815144 - L1MC5 LINE L1 -585 7376 7314 2131 68 0 18 chr20 338745 339024 -71814858 - AluY SINE Alu -11 300 27 396 359 92 9 chr20 339032 339249 -71814633 - HAL1 LINE L1 -1428 1079 845 1525 170 40 7 chr20 339308 339585 -71814297 + AluJb SINE Alu 1 286 -26 660 244 51 15 chr20 339605 339802 -71814080 + MIR SINE MIR 56 259 -3 218 307 123 9 chr20 339810 339924 -71813958 - L2 LINE L2 -448 2866 2740 252 0 0 0 chr20 339986 340014 -71813868 + (TG)n Simple_repeat Simple_repeat 1 28 0 230 246 0 29 chr20 340247 340316 -71813566 + CT-rich Low_complexity Low_complexity 1 67 0 295 210 51 27 chr20 340718 340830 -71813052 + MIR SINE MIR 43 156 -78 1536 183 210 44 chr20 340855 340962 -71812920 - L1MC4 LINE L1 0 8042 7954 2539 37 0 0 chr20 340962 341258 -71812624 - AluY SINE Alu -15 296 1 1536 183 210 44 chr20 341258 341692 -71812190 - L1MC4 LINE L1 -88 7954 7411 326 47 0 82 chr20 343366 343451 -71810431 + (CCCCCA)n Simple_repeat Simple_repeat 6 83 0 329 326 42 0 chr20 343829 343973 -71809909 - MIR SINE MIR -67 195 46 250 272 233 26 chr20 344155 344664 -71809218 - L2 LINE L2 -84 3229 2553 661 162 0 0 chr20 345022 345127 -71808755 - FLAM_C SINE Alu -1 142 38 300 313 114 20 chr20 345223 345255 -71808627 + MIR SINE MIR 3 31 -231 1577 139 56 63 chr20 345255 345557 -71808325 + AluJb SINE Alu 1 300 -12 300 313 114 20 chr20 345557 345725 -71808157 + MIR SINE MIR 31 222 -40 2204 81 3 0 chr20 345727 346011 -71807871 + AluSp SINE Alu 3 287 -26 321 221 139 0 chr20 346057 346143 -71807739 - MLT1H LTR MaLR 0 595 498 1207 142 25 0 chr20 346245 346449 -71807433 - MER2 DNA MER2_type -135 210 2 546 251 93 57 chr20 346451 346785 -71807097 - MLT1H LTR MaLR -96 453 108 307 244 56 0 chr20 346918 347008 -71806874 + MIR3 SINE MIR 66 160 -48 2254 102 0 0 chr20 347715 348018 -71805864 - AluSx SINE Alu -9 303 1 324 263 38 2 chr20 348040 348152 -71805730 - L1ME2 LINE L1 -5 6161 6045 353 345 60 32 chr20 348275 348331 -71805551 - L1ME LINE L1 -382 5739 5686 2145 123 0 0 chr20 348331 348632 -71805250 - AluSg SINE Alu -9 301 1 353 345 60 32 chr20 348632 348781 -71805101 - L1ME LINE L1 -435 5686 5523 3450 116 41 0 chr20 348781 349298 -71804584 - L1MA2 LINE L1 0 6304 5767 353 345 60 32 chr20 349298 349343 -71804539 - L1ME LINE L1 -598 5523 5481 911 78 39 0 chr20 349349 349477 -71804405 - L1MB3 LINE L1 0 6183 6051 1583 174 3 43 chr20 349524 349846 -71804036 - AluJo SINE Alu -3 309 1 210 342 26 13 chr20 350361 350513 -71803369 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 346 203 0 0 chr20 350922 350981 -71802901 + AluSp SINE Alu 131 189 -114 212 113 170 19 chr20 350999 351052 -71802830 + MIR SINE MIR 83 143 -65 1338 201 108 25 chr20 351860 351934 -71801948 + MER58B DNA MER1_type 2 68 -2352 2325 78 3 0 chr20 351934 352228 -71801654 - AluSp SINE Alu -13 300 6 1338 201 108 25 chr20 352228 352467 -71801415 + MER58B DNA MER1_type 68 341 0 520 314 69 16 chr20 352470 352715 -71801167 + MIR SINE MIR 5 262 0 476 250 74 69 chr20 354743 354959 -71798923 + Charlie8 DNA MER1_type 49 265 -2152 445 244 76 130 chr20 356360 356675 -71797207 - MER21B LTR ERV1 -158 705 408 2387 63 7 0 chr20 356709 357009 -71796873 - AluSq SINE Alu -11 302 1 443 213 53 142 chr20 357070 357295 -71796587 - MER21B LTR ERV1 -658 205 1 2664 170 147 98 chr20 357898 358769 -71795113 - MER21A LTR ERV1 -17 914 1 2217 106 0 3 chr20 359538 359849 -71794033 + AluSx SINE Alu 1 310 -2 454 161 43 11 chr20 362687 362780 -71791102 - MER103 DNA DNA -57 109 14 2066 103 10 3 chr20 363517 363809 -71790073 + AluSp SINE Alu 2 295 -18 21 0 0 0 chr20 363824 363845 -71790037 + AT_rich Low_complexity Low_complexity 1 21 0 1555 221 107 94 chr20 364927 365523 -71788359 + L1MC4 LINE L1 7323 7931 -111 2194 77 0 10 chr20 365523 365820 -71788062 + AluY SINE Alu 1 294 -17 1555 221 107 94 chr20 365820 365934 -71787948 + L1MC4 LINE L1 7931 8042 0 2035 98 7 24 chr20 366559 366854 -71787028 + AluSq SINE Alu 11 300 -13 182 156 22 0 chr20 367258 367303 -71786579 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2067 114 14 0 chr20 369056 369346 -71784536 - AluSx SINE Alu -16 296 3 1319 190 133 0 chr20 369376 369639 -71784243 - AluJo SINE Alu -4 298 1 2094 104 0 41 chr20 369651 369967 -71783915 - AluSg1 SINE Alu -6 303 1 759 289 191 48 chr20 370537 371602 -71782280 + L2 LINE L2 1758 2974 -340 236 200 53 80 chr20 371786 371861 -71782021 + L2 LINE L2 3185 3257 -15 206 326 128 29 chr20 372009 372181 -71781701 + L3 LINE CR1 875 1063 -514 225 301 62 35 chr20 372347 372460 -71781422 + MIR3 SINE MIR 93 208 0 212 287 121 57 chr20 372986 373474 -71780408 + L2 LINE L2 1697 2215 -1099 776 216 24 61 chr20 373505 373718 -71780164 + MER58A DNA MER1_type 19 223 -1 2265 101 0 3 chr20 374058 374364 -71779518 - AluSx SINE Alu -7 305 1 278 280 0 47 chr20 374440 374547 -71779335 + L2 LINE L2 2992 3093 -179 2176 97 0 3 chr20 374895 375194 -71778688 - AluSq SINE Alu -15 298 1 335 323 31 0 chr20 375493 375589 -71778293 + L2 LINE L2 3136 3234 -38 1812 106 25 21 chr20 375905 376219 -71777663 - AluY SINE Alu 0 315 1 413 251 29 12 chr20 376249 376420 -71777462 - AluJb SINE Alu -21 291 118 333 287 61 17 chr20 376585 376700 -71777182 - L1M4 LINE L1 -2946 3200 3081 289 368 0 23 chr20 376709 376842 -71777040 + CT-rich Low_complexity Low_complexity 6 135 0 2164 119 0 6 chr20 376980 377292 -71776590 + AluSx SINE Alu 3 312 0 2259 94 0 0 chr20 378011 378309 -71775573 + AluSg SINE Alu 1 298 -12 653 193 0 0 chr20 378309 378423 -71775459 - FLAM_A SINE Alu -18 115 2 2024 92 13 23 chr20 378444 378747 -71775135 - AluSg SINE Alu -10 300 1 995 63 0 0 chr20 378756 378882 -71775000 - AluSc SINE Alu -12 297 172 180 0 0 0 chr20 378888 378908 -71774974 + (A)n Simple_repeat Simple_repeat 1 20 0 2239 101 0 3 chr20 378917 379225 -71774657 + AluSg SINE Alu 1 307 -3 340 291 0 12 chr20 379233 379319 -71774563 + MIR SINE MIR 38 122 -86 2055 106 17 0 chr20 379756 380048 -71773834 - AluSx SINE Alu -15 297 1 623 82 41 20 chr20 380265 380363 -71773519 + HY3 scRNA scRNA 1 100 -1 2076 99 0 10 chr20 380865 381177 -71772705 + AluSx SINE Alu 1 309 0 423 189 0 14 chr20 381337 381411 -71772471 - AluJb SINE Alu -28 284 212 2042 112 0 7 chr20 381629 381933 -71771949 + AluSg SINE Alu 1 302 -8 1465 176 49 4 chr20 381949 382216 -71771666 + AluJo SINE Alu 1 279 -33 2174 89 13 22 chr20 382470 382786 -71771096 + AluSp SINE Alu 1 313 0 2211 75 0 26 chr20 382793 383101 -71770781 + AluSp SINE Alu 1 300 -13 829 88 7 73 chr20 383117 383143 -71770739 + AluSq/x SINE Alu 10 36 -277 2224 94 3 19 chr20 383143 383451 -71770431 - AluSg SINE Alu -7 303 1 829 88 7 73 chr20 383451 383560 -71770322 + AluSq/x SINE Alu 36 136 -177 2145 78 20 10 chr20 383560 383854 -71770028 + AluY SINE Alu 1 297 -14 1767 133 14 14 chr20 384252 384573 -71769309 - AluSx SINE Alu 0 321 1 538 213 0 71 chr20 384777 384918 -71768964 - MER94 DNA DNA 0 134 4 2030 122 0 0 chr20 384954 385249 -71768633 + AluSx SINE Alu 18 312 0 2324 90 3 0 chr20 385252 385562 -71768320 + AluSq SINE Alu 1 311 -2 1118 182 146 16 chr20 385608 385861 -71768021 + AluSx SINE Alu 12 297 -15 198 103 0 0 chr20 385939 385968 -71767914 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 324 310 138 85 chr20 385983 386159 -71767723 - L2 LINE L2 -1 3271 3106 2190 101 0 7 chr20 386159 386467 -71767415 - AluSq SINE Alu -7 306 1 324 310 138 85 chr20 386467 386526 -71767356 - L2 LINE L2 -166 3106 3052 2353 88 3 0 chr20 386526 386834 -71767048 - AluSp SINE Alu -4 309 1 1442 165 91 11 chr20 386835 387120 -71766762 - AluJo SINE Alu -4 308 1 324 310 138 85 chr20 387120 387281 -71766601 - L2 LINE L2 -219 3053 2851 1762 137 23 23 chr20 387913 388212 -71765670 - AluJb SINE Alu -13 299 1 225 0 0 0 chr20 389238 389263 -71764619 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 445 209 9 45 chr20 389263 389366 -71764516 - MER31A LTR ERV1 -32 453 353 848 162 0 7 chr20 389903 390051 -71763831 + FRAM SINE Alu 20 166 -10 24 0 0 0 chr20 390655 390679 -71763203 + AT_rich Low_complexity Low_complexity 1 24 0 1564 153 18 7 chr20 390979 391260 -71762622 - AluJo SINE Alu -28 284 1 739 206 144 0 chr20 391303 391483 -71762399 + L1MB7 LINE L1 5955 6160 -24 206 271 7 46 chr20 391807 391958 -71761924 + C-rich Low_complexity Low_complexity 3 147 0 21 0 0 0 chr20 392004 392025 -71761857 + GC_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr20 392123 392171 -71761711 + GC_rich Low_complexity Low_complexity 1 48 0 260 252 164 101 chr20 392279 392438 -71761444 + MIR SINE MIR 83 251 -11 339 239 65 0 chr20 392542 392634 -71761248 + MER91C DNA MER1_type 7 104 -36 184 309 104 70 chr20 392663 392893 -71760989 + L2 LINE L2 718 955 -2359 616 53 0 0 chr20 392895 392971 -71760911 - Alu SINE Alu -233 77 2 1455 151 88 18 chr20 393301 393573 -71760309 - AluJo SINE Alu -16 296 6 2051 121 0 0 chr20 393701 393998 -71759884 + AluSx SINE Alu 14 310 -2 364 248 83 0 chr20 394234 394343 -71759539 - L1MCc LINE L1 -4365 2757 2640 * 870 218 33 37 chr20 394340 394613 -71759269 - L1ME1 LINE L1 -165 6001 5764 1373 198 72 0 chr20 394707 394985 -71758897 + MER58B DNA MER1_type 21 318 -23 2159 66 17 10 chr20 395022 395310 -71758572 - AluSp SINE Alu -23 290 1 2157 115 0 0 chr20 395336 395641 -71758241 + AluSx SINE Alu 1 305 -7 562 163 24 41 chr20 395657 395780 -71758102 - FLAM_C SINE Alu -22 121 1 1486 243 156 28 chr20 395808 396222 -71757660 - L1MCc LINE L1 -4493 2448 2088 372 94 0 0 chr20 396222 396275 -71757607 + (TA)n Simple_repeat Simple_repeat 2 54 0 1486 243 156 28 chr20 396275 396619 -71757263 - L1MCc LINE L1 -4853 2088 1789 2362 60 13 0 chr20 396619 396918 -71756964 - AluY SINE Alu -8 303 1 1486 243 156 28 chr20 396918 397272 -71756610 - L1MCc LINE L1 -5152 1789 1188 1056 169 6 6 chr20 397277 397460 -71756422 + AluJo SINE Alu 1 183 -129 2206 177 100 15 chr20 397460 397929 -71755953 - LTR22 LTR ERVK 0 509 1 22635 84 21 2 chr20 397929 401045 -71752837 - HERVK22 LTR ERVK 0 6837 2332 1415 119 25 0 chr20 401043 401245 -71752637 - HERVK22 LTR ERVK -5932 905 699 * 5262 100 42 32 chr20 401233 402033 -71751849 - HERVK22 LTR ERVK -6029 808 1 2166 184 98 11 chr20 402033 402501 -71751381 - LTR22 LTR ERVK 0 509 1 862 121 0 0 chr20 402502 402626 -71751256 + AluJo SINE Alu 179 302 -10 830 246 99 55 chr20 402626 402988 -71750894 - L1MCc LINE L1 -5230 1193 816 370 266 46 87 chr20 403614 403653 -71750229 - L2 LINE L2 -562 2752 2713 1182 186 90 29 chr20 403653 403932 -71749950 - AluJo SINE Alu -4 298 3 370 266 46 87 chr20 403932 404133 -71749749 - L2 LINE L2 -601 2713 2522 725 232 78 53 chr20 404210 404529 -71749353 - HAL1 LINE L1 -168 2339 2013 2045 123 0 7 chr20 404775 405076 -71748806 + AluSx SINE Alu 1 299 -13 251 275 66 32 chr20 405219 405391 -71748491 + MLT1H LTR MaLR 50 201 -208 1933 138 3 3 chr20 405858 406156 -71747726 - AluSx SINE Alu -13 299 2 1782 172 7 0 chr20 406166 406469 -71747413 - AluJb SINE Alu -7 305 1 1885 128 7 0 chr20 406499 406787 -71747095 - AluJo SINE Alu -22 290 1 1100 183 26 30 chr20 406807 407037 -71746845 - AluJb SINE Alu -26 286 58 1324 55 31 0 chr20 407308 407471 -71746411 + AluSp SINE Alu 1 168 -145 253 0 54 0 chr20 407482 407519 -71746363 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 228 211 171 0 chr20 407693 407769 -71746113 + L2 LINE L2 3175 3263 -9 1735 156 30 20 chr20 408245 408546 -71745336 + AluJb SINE Alu 1 304 -8 344 217 96 70 chr20 408728 408843 -71745039 - MER91B DNA MER1_type -61 129 12 197 219 276 9 chr20 408855 408960 -71744922 - MIR SINE MIR -6 256 124 1060 192 103 5 chr20 409380 409594 -71744288 + MER46A DNA MER2_type 1 235 -1 306 67 0 0 chr20 409833 409878 -71744004 + (TG)n Simple_repeat Simple_repeat 2 46 0 27 29 0 0 chr20 410709 410743 -71743139 + AT_rich Low_complexity Low_complexity 1 34 0 270 116 0 0 chr20 413063 413106 -71740776 + (TTCC)n Simple_repeat Simple_repeat 1 43 0 308 246 76 94 chr20 413799 413970 -71739912 - MIR SINE MIR -56 206 39 797 144 106 0 chr20 413994 414126 -71739756 + MER3 DNA MER1_type 63 208 -1 279 0 0 0 chr20 414293 414324 -71739558 + (TG)n Simple_repeat Simple_repeat 2 32 0 2336 103 3 0 chr20 414383 414694 -71739188 + AluSx SINE Alu 1 312 0 252 0 0 0 chr20 414708 414736 -71739146 + (TA)n Simple_repeat Simple_repeat 2 29 0 2067 107 14 3 chr20 414792 415081 -71738801 - AluSx SINE Alu -20 292 1 583 258 125 33 chr20 415081 415321 -71738561 - L1MC4a LINE L1 -1915 5893 5632 234 249 186 27 chr20 416852 416975 -71736907 - MIR SINE MIR -77 131 45 1210 174 144 8 chr20 417639 417903 -71735979 - AluJo SINE Alu -12 300 1 317 337 53 80 chr20 418579 418843 -71735039 + L2 LINE L2 2981 3237 -35 36 0 0 0 chr20 419535 419571 -71734311 + AT_rich Low_complexity Low_complexity 1 36 0 2196 110 10 7 chr20 419616 419925 -71733957 - AluSg SINE Alu 0 310 1 258 125 0 0 chr20 419927 419975 -71733907 + (T)n Simple_repeat Simple_repeat 1 48 0 2066 117 20 7 chr20 420003 420302 -71733580 - AluSg1 SINE Alu -6 303 1 925 132 112 20 chr20 420303 420455 -71733427 - FRAM SINE Alu -14 162 1 319 297 108 51 chr20 420553 420748 -71733134 - L1ME LINE L1 -317 5804 5599 1880 155 3 17 chr20 420987 421284 -71732598 + AluJo SINE Alu 5 297 -15 1933 75 8 11 chr20 421284 421549 -71732333 + AluY SINE Alu 44 308 -3 223 319 77 47 chr20 421985 422154 -71731728 + L2 LINE L2 2648 2821 -493 360 310 47 31 chr20 422372 422501 -71731381 + L2 LINE L2 3182 3312 -1 949 248 89 23 chr20 422679 422982 -71730900 + L2 LINE L2 2348 2670 -644 46 45 0 0 chr20 422987 423054 -71730828 + AT_rich Low_complexity Low_complexity 1 67 0 3181 182 128 57 chr20 423092 423623 -71730259 - L1MD2 LINE L1 -32 6327 5716 2320 81 17 7 chr20 423623 423921 -71729961 - AluSg SINE Alu -9 301 1 3181 182 128 57 chr20 423921 424212 -71729670 - L1MD2 LINE L1 -643 5716 5447 825 300 149 16 chr20 424215 424754 -71729128 + L2 LINE L2 2697 3313 0 221 269 43 85 chr20 424937 425078 -71728804 - MIR SINE MIR -72 190 56 239 316 13 0 chr20 425184 425260 -71728622 - L2 LINE L2 -3 3269 3193 1261 193 52 0 chr20 425800 426013 -71727869 + MER58A DNA MER1_type 1 224 0 1445 163 58 34 chr20 426750 427045 -71726837 - AluJo SINE Alu -8 304 3 784 116 0 27 chr20 427060 427172 -71726710 - FLAM_C SINE Alu -18 125 17 1225 112 0 6 chr20 427934 428103 -71725779 - FRAM SINE Alu -8 168 1 24 0 0 0 chr20 429557 429581 -71724301 + AT_rich Low_complexity Low_complexity 1 24 0 237 306 65 28 chr20 429630 429738 -71724144 + L2 LINE L2 3156 3267 -5 527 295 84 0 chr20 429998 430164 -71723718 + MIR SINE MIR 16 195 -67 2286 52 4 0 chr20 430233 430502 -71723380 - AluY SINE Alu -8 303 34 2355 93 0 0 chr20 430668 430959 -71722923 - AluSg SINE Alu -17 293 3 1175 159 142 21 chr20 430996 431285 -71722597 - MER33 DNA MER1_type 0 324 1 250 338 102 13 chr20 431378 431535 -71722347 - MER5A DNA MER1_type -2 187 17 868 204 0 6 chr20 432748 432910 -71720972 - FRAM SINE Alu -18 158 1 2208 211 39 66 chr20 433061 433494 -71720388 + MER119 DNA MER1_type 34 450 -133 2505 71 0 3 chr20 433494 433805 -71720077 + AluSx SINE Alu 1 310 -2 2208 211 39 66 chr20 433805 433935 -71719947 + MER119 DNA MER1_type 450 582 -1 856 267 44 4 chr20 434063 434288 -71719594 + Charlie8 DNA MER1_type 45 278 -2139 327 275 55 9 chr20 434453 434562 -71719320 + MIR SINE MIR 32 145 -63 2476 61 0 10 chr20 434950 435260 -71718622 - AluY SINE Alu -4 307 1 22 0 0 0 chr20 435265 435287 -71718595 + AT_rich Low_complexity Low_complexity 1 22 0 2628 36 0 7 chr20 435468 435774 -71718108 - AluY SINE Alu -7 304 1 957 144 0 0 chr20 436708 436854 -71717028 + AluSg/x SINE Alu 129 274 -36 1021 130 204 133 chr20 437470 437793 -71716089 - MER7A DNA MER2_type -2 344 1 1835 174 0 3 chr20 439188 439475 -71714407 - AluJb SINE Alu -26 286 1 368 222 139 141 chr20 439475 439769 -71714113 + L1MC4 LINE L1 7478 7771 -271 2444 69 3 10 chr20 439769 440073 -71713809 - AluSp SINE Alu -11 302 1 368 222 139 141 chr20 440073 440299 -71713583 + L1MC4 LINE L1 7771 7999 -43 1734 165 9 37 chr20 440299 440620 -71713262 - AluJb SINE Alu 0 312 1 3719 154 29 50 chr20 440631 440672 -71713210 - L1MB3 LINE L1 0 6183 6143 1651 157 61 7 chr20 440672 440952 -71712930 + AluJb SINE Alu 1 295 -17 3719 154 29 50 chr20 440952 441302 -71712580 - L1MB3 LINE L1 -40 6143 5811 252 0 0 0 chr20 441302 441330 -71712552 + (CA)n Simple_repeat Simple_repeat 2 29 0 3719 154 29 50 chr20 441330 441659 -71712223 - L1MB3 LINE L1 -372 5811 5477 628 88 22 11 chr20 441664 441755 -71712127 - FLAM_C SINE Alu -19 124 33 1070 157 12 23 chr20 441776 442016 -71711866 - L1P3 LINE L1 -632 5522 5280 1632 173 48 0 chr20 443673 443974 -71709908 + AluJb SINE Alu 1 314 0 1790 151 0 31 chr20 444049 444340 -71709542 - AluJb SINE Alu -30 282 1 198 311 49 0 chr20 444504 444565 -71709317 - L2 LINE L2 -25 3288 3225 486 269 253 23 chr20 444580 445015 -71708867 - L2 LINE L2 -516 2798 2264 347 304 119 6 chr20 445008 445176 -71708706 - MIR SINE MIR -48 214 28 * 227 369 39 39 chr20 445255 445385 -71708497 + L2 LINE L2 3143 3272 0 262 208 0 0 chr20 446937 446985 -71706897 - L2 LINE L2 -6 3266 3219 224 91 0 0 chr20 447149 447182 -71706700 - L2 LINE L2 -2 3311 3279 840 186 0 0 chr20 447599 447728 -71706154 - FRAM SINE Alu -47 129 1 233 290 110 10 chr20 448030 448130 -71705752 + L1ME1 LINE L1 647 756 -5449 2418 75 0 28 chr20 448134 448453 -71705429 - AluY SINE Alu -1 310 1 2167 128 0 7 chr20 448532 448836 -71705046 - AluSx SINE Alu -10 302 1 521 284 118 34 chr20 448868 449031 -71704851 + L1ME1 LINE L1 1268 1416 -4980 773 214 0 0 chr20 449031 449162 -71704720 + FLAM_A SINE Alu 1 131 -2 521 284 118 34 chr20 449162 449347 -71704535 + L1ME1 LINE L1 1416 1645 -4751 328 330 69 35 chr20 449473 449734 -71704148 + L1ME1 LINE L1 1918 2187 -4209 255 220 11 55 chr20 449761 449852 -71704030 + L1ME1 LINE L1 2201 2287 -3930 * 2136 195 73 91 chr20 449843 450108 -71703774 + L1ME1 LINE L1 4725 4993 -1242 1843 157 0 0 chr20 450108 450382 -71703500 - AluSx SINE Alu -22 290 17 2136 195 73 91 chr20 450382 451353 -71702529 + L1ME1 LINE L1 4993 5923 -312 816 204 0 0 chr20 451354 451486 -71702396 - FLAM_C SINE Alu -10 133 2 374 86 200 0 chr20 451486 451556 -71702326 + L1ME1 LINE L1 5840 5923 -243 1231 130 31 16 chr20 451556 451748 -71702134 + MER1B DNA MER1_type 1 195 -102 2698 157 87 29 chr20 451866 452290 -71701592 + L1MD3 LINE L1 7401 7866 -129 1378 165 105 35 chr20 452290 452575 -71701307 - AluJo SINE Alu -7 305 1 2698 157 87 29 chr20 452575 452703 -71701179 + L1MD3 LINE L1 7866 7985 -10 2087 191 19 24 chr20 452746 453208 -71700674 + L1ME1 LINE L1 5494 5953 -213 1581 65 0 0 chr20 453208 453393 -71700489 + AluY SINE Alu 1 185 -126 704 58 0 0 chr20 453393 453480 -71700402 + AluY SINE Alu 218 304 -7 573 272 97 19 chr20 453480 453686 -71700196 + L1ME1 LINE L1 5945 6166 0 1929 130 20 13 chr20 453740 454039 -71699843 + AluSx SINE Alu 1 301 -11 1416 105 85 74 chr20 454071 454329 -71699553 + AluSx SINE Alu 44 304 -8 458 125 38 12 chr20 454356 454436 -71699446 + L1MA6 LINE L1 6215 6296 -4 1293 207 79 8 chr20 454441 454707 -71699175 + AluJo SINE Alu 2 286 -16 23 0 0 0 chr20 454717 454740 -71699142 + AT_rich Low_complexity Low_complexity 1 23 0 291 136 102 0 chr20 454763 454822 -71699060 + L1M4 LINE L1 2945 3009 -3137 911 144 23 0 chr20 454828 454960 -71698922 + AluJo SINE Alu 1 135 -177 2622 52 3 0 chr20 454969 455277 -71698605 + AluY SINE Alu 1 309 -2 1520 151 3 102 chr20 455289 455614 -71698268 + AluJo SINE Alu 1 293 -19 793 168 15 29 chr20 455790 455927 -71697955 + AluJo SINE Alu 2 136 -176 1527 131 75 75 chr20 455927 456209 -71697673 + AluJo SINE Alu 1 282 -30 1996 103 28 14 chr20 456272 456554 -71697328 + AluSg SINE Alu 1 286 -24 618 79 0 0 chr20 456554 456643 -71697239 + (GA)n Simple_repeat Simple_repeat 2 90 0 357 254 44 33 chr20 456708 456889 -71696993 + L1M4 LINE L1 3275 3457 -2689 766 149 0 0 chr20 457329 457436 -71696446 - AluSq/x SINE Alu -205 108 2 1213 164 66 145 chr20 458042 458360 -71695522 - AluJo SINE Alu -9 293 1 4263 154 23 16 chr20 458555 458633 -71695249 + MER44D DNA MER2_type 33 109 -2378 1399 175 65 14 chr20 458633 458924 -71694958 - AluJo SINE Alu -6 306 1 4263 154 23 16 chr20 458924 459540 -71694342 + MER44D DNA MER2_type 109 604 -1 2153 174 61 30 chr20 459583 460055 -71693827 - L1MB7 LINE L1 -19 6165 5679 1913 147 3 19 chr20 460058 460372 -71693510 - AluJo SINE Alu -3 309 1 1970 128 7 3 chr20 460401 460699 -71693183 + AluSq SINE Alu 1 299 -14 2005 78 7 55 chr20 461768 462075 -71691807 - AluSc SINE Alu -17 292 1 1072 130 0 0 chr20 463055 463209 -71690673 + AluSg/x SINE Alu 137 290 -22 197 296 99 12 chr20 463727 463808 -71690074 - MIR SINE MIR -114 148 61 1978 116 6 25 chr20 464345 464663 -71689219 + AluSx SINE Alu 1 312 0 819 151 0 0 chr20 464678 464797 -71689085 + FLAM_C SINE Alu 7 125 -18 2021 95 56 0 chr20 465072 465357 -71688525 + AluSx SINE Alu 1 301 -11 438 128 163 0 chr20 466027 466113 -71687769 - MIR SINE MIR -75 187 88 213 297 27 14 chr20 466109 466183 -71687699 - MIR SINE MIR -102 160 86 * 198 182 73 73 chr20 466428 466483 -71687399 + L2 LINE L2 3216 3270 -2 1827 106 67 14 chr20 467562 467845 -71686037 - AluSx SINE Alu -14 298 1 2336 188 155 11 chr20 468730 469277 -71684605 - MLT1E2 LTR MaLR 0 626 1 918 275 85 87 chr20 469277 469888 -71683994 - MLT1E2-int LTR MaLR 0 1371 762 1087 220 13 4 chr20 469904 470136 -71683746 - MLT1E2-int LTR MaLR -889 482 249 727 106 19 0 chr20 470142 470246 -71683636 - AluJb SINE Alu -19 293 188 370 172 253 0 chr20 470249 470348 -71683534 - MLT1E2-int LTR MaLR -1247 124 1 2959 183 37 41 chr20 470348 470977 -71682905 - MLT1E2 LTR MaLR 0 626 1 689 244 146 28 chr20 471766 471979 -71681903 - MIR SINE MIR -23 239 2 2281 58 7 0 chr20 472033 472328 -71681554 - AluSg SINE Alu -13 297 1 270 329 67 48 chr20 474013 474329 -71679553 + L2 LINE L2 2636 2957 -357 300 258 16 0 chr20 474944 475006 -71678876 + MIR3 SINE MIR 114 176 -32 525 308 263 23 chr20 475099 475539 -71678343 - L2 LINE L2 -3 3310 2752 487 316 35 0 chr20 475904 476075 -71677807 - MIR SINE MIR -40 222 46 180 0 0 0 chr20 476086 476106 -71677776 + (TC)n Simple_repeat Simple_repeat 2 21 0 1610 165 4 11 chr20 476106 476273 -71677609 - AluJo SINE Alu -27 285 119 204 40 0 0 chr20 476273 476298 -71677584 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1610 165 4 11 chr20 476298 476397 -71677485 - AluJo SINE Alu -193 119 21 1346 277 62 57 chr20 476428 476974 -71676908 - MLT1E2 LTR MaLR 0 549 1 268 264 14 0 chr20 476991 477063 -71676819 + L1ME LINE L1 5759 5831 -290 869 183 29 11 chr20 477063 477238 -71676644 - MIR SINE MIR -22 240 63 2108 100 14 0 chr20 477382 477673 -71676209 - AluSq SINE Alu -18 295 1 2296 74 3 0 chr20 477735 478031 -71675851 + AluY SINE Alu 1 297 -14 1698 162 0 10 chr20 478176 478466 -71675416 - AluJb SINE Alu -5 307 21 200 213 0 0 chr20 478578 478625 -71675257 + T-rich Low_complexity Low_complexity 1 47 0 391 246 10 13 chr20 478853 478958 -71674924 + MIR SINE MIR 48 147 -61 2103 126 3 3 chr20 478962 479337 -71674545 + AluSx SINE Alu 1 375 0 410 245 27 54 chr20 479382 479529 -71674353 + MLT1H LTR MaLR 68 210 -339 22 0 0 0 chr20 479685 479707 -71674175 + AT_rich Low_complexity Low_complexity 1 22 0 296 288 32 48 chr20 479993 480118 -71673764 + MIR SINE MIR 140 262 0 711 300 146 6 chr20 480120 480463 -71673419 - L2 LINE L2 -62 3251 2861 3036 231 82 58 chr20 480571 481179 -71672703 - L2 LINE L2 -468 2846 2255 1645 178 48 66 chr20 481179 481572 -71672310 + MLT1B LTR MaLR 4 389 -1 3036 231 82 58 chr20 481572 481611 -71672271 - L2 LINE L2 -1059 2255 2218 2131 105 7 0 chr20 481611 481905 -71671977 + AluSq SINE Alu 1 296 -17 3036 231 82 58 chr20 481905 482262 -71671620 - L2 LINE L2 -1096 2218 1816 267 103 0 0 chr20 482277 482316 -71671566 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 2301 93 0 0 chr20 482319 482620 -71671262 - AluSx SINE Alu -11 301 1 2673 208 122 41 chr20 482621 482650 -71671232 + L1MC4 LINE L1 7100 7125 -917 2193 105 0 3 chr20 482650 482954 -71670928 + AluSq SINE Alu 1 303 -10 2673 208 122 41 chr20 482954 483315 -71670567 + L1MC4 LINE L1 7125 7456 -586 2242 96 0 0 chr20 483315 483607 -71670275 + AluSg SINE Alu 1 292 -18 2673 208 122 41 chr20 483607 484020 -71669862 + L1MC4 LINE L1 7456 7982 -60 1731 172 3 0 chr20 484020 484310 -71669572 - AluJo SINE Alu -19 293 3 2673 208 122 41 chr20 484310 484375 -71669507 + L1MC4 LINE L1 7982 8040 -2 2468 234 114 22 chr20 484382 485152 -71668730 - L2 LINE L2 -1480 1834 994 445 292 17 17 chr20 485148 485268 -71668614 - MIR SINE MIR -129 133 14 * 182 88 0 29 chr20 485393 485427 -71668455 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 417 275 116 91 chr20 485540 486047 -71667835 - L2 LINE L2 -9 3304 2743 1323 151 50 107 chr20 486047 486169 -71667713 + AluJb SINE Alu 1 128 -184 2097 74 3 61 chr20 486169 486481 -71667401 + AluY SINE Alu 1 294 -17 1323 151 50 107 chr20 486481 486675 -71667207 + AluJb SINE Alu 128 299 -13 417 275 116 91 chr20 486675 486910 -71666972 - L2 LINE L2 -570 2743 2515 218 280 87 0 chr20 487161 487234 -71666648 + MIR SINE MIR 85 149 -59 1816 168 3 0 chr20 487271 487575 -71666307 + AluJb SINE Alu 1 305 -7 367 305 62 8 chr20 487612 487740 -71666142 - MIR3 SINE MIR -71 137 3 270 283 264 13 chr20 487826 487985 -71665897 + MIR SINE MIR 7 205 -57 924 245 138 47 chr20 488075 488178 -71665704 - MER20B DNA MER1_type -2 781 689 2255 79 0 3 chr20 488178 488470 -71665412 - AluSc SINE Alu -18 291 1 924 245 138 47 chr20 488470 488757 -71665125 - MER20B DNA MER1_type -94 689 342 2202 146 22 0 chr20 488757 489113 -71664769 + MLT1A1 LTR MaLR 2 365 0 924 245 138 47 chr20 489113 489170 -71664712 - MER20B DNA MER1_type -441 342 292 1874 134 22 116 chr20 489173 489355 -71664527 + L1MC2 LINE L1 5928 6125 -219 2031 77 0 71 chr20 489355 489691 -71664191 + AluSx SINE Alu 1 312 0 1874 134 22 116 chr20 489691 489902 -71663980 + L1MC2 LINE L1 6125 6277 -67 1494 183 33 36 chr20 489902 490203 -71663679 - AluJo SINE Alu -12 300 1 1874 134 22 116 chr20 490203 490256 -71663626 + L1MC2 LINE L1 6277 6333 -11 508 211 0 0 chr20 490282 490386 -71663496 - MER20B DNA MER1_type -494 289 186 287 325 25 42 chr20 490643 490768 -71663114 + MIR SINE MIR 41 163 -56 1269 256 153 9 chr20 490801 491246 -71662636 - L2 LINE L2 0 3313 2805 183 67 0 67 chr20 491531 491561 -71662321 - MER5A DNA MER1_type -35 154 127 320 155 17 17 chr20 491561 491619 -71662263 - AluJ/FLAM SINE Alu -244 58 1 255 238 95 29 chr20 491697 491802 -71662080 - MIR SINE MIR -67 141 30 319 288 85 72 chr20 491826 491979 -71661903 - MIR SINE MIR -29 233 79 226 321 205 9 chr20 491986 492098 -71661784 + MIR SINE MIR 16 149 -113 198 329 14 14 chr20 492446 492519 -71661363 + MIR SINE MIR 111 183 -79 550 269 45 6 chr20 492849 493005 -71660877 - MIR SINE MIR -38 224 63 925 214 78 79 chr20 493612 494145 -71659737 - L2 LINE L2 -1 3312 2771 2034 105 3 7 chr20 494145 494459 -71659423 - AluSx SINE Alu 0 312 5 925 214 78 79 chr20 494459 494609 -71659273 - L2 LINE L2 -542 2771 2622 228 274 57 47 chr20 494669 494775 -71659107 - MIR SINE MIR -10 252 146 783 184 13 13 chr20 494806 494964 -71658918 - L1MB5 LINE L1 0 6174 6017 418 267 0 9 chr20 494964 495069 -71658813 - MIR SINE MIR -98 164 61 2013 128 10 3 chr20 495159 495463 -71658419 - AluSq SINE Alu -7 306 1 2095 108 6 10 chr20 495490 495804 -71658078 + AluSp SINE Alu 1 313 0 248 220 121 26 chr20 495937 496111 -71657771 + MIR SINE MIR 9 248 -14 2130 105 0 0 chr20 496279 496594 -71657288 - AluSx SINE Alu 0 312 1 260 287 20 53 chr20 496870 497001 -71656881 + MIR SINE MIR 39 166 -62 454 138 0 0 chr20 497722 497787 -71656095 - AluSq/x SINE Alu -194 119 55 373 217 54 0 chr20 498245 498337 -71655545 + MIR SINE MIR 80 176 -86 2206 119 0 0 chr20 499048 499359 -71654523 - AluSx SINE Alu -1 311 1 2194 96 10 0 chr20 499814 500115 -71653767 - AluSg SINE Alu -6 304 1 1961 127 0 7 chr20 500217 500536 -71653346 + AluSx SINE Alu 1 317 0 1520 200 95 77 chr20 500559 500652 -71653230 - Charlie4a DNA MER1_type -1456 505 415 744 172 0 22 chr20 500652 500786 -71653096 - FLAM_C SINE Alu 0 133 3 1520 200 95 77 chr20 500786 501188 -71652694 - Charlie4a DNA MER1_type -1546 415 1 263 307 137 13 chr20 501247 501400 -71652482 - MIR3 SINE MIR -36 172 1 184 286 0 29 chr20 501925 501995 -71651887 + MIR SINE MIR 80 147 -115 181 311 40 0 chr20 502230 502304 -71651578 - L2 LINE L2 -131 3182 3106 184 242 326 5 chr20 502364 502554 -71651328 - L2 LINE L2 -351 2963 2713 261 296 74 9 chr20 502599 502707 -71651175 + MIR SINE MIR 31 145 -63 574 233 123 110 chr20 503435 503882 -71650000 + L2 LINE L2 2819 3271 -1 401 218 89 10 chr20 503889 503990 -71649892 - MIR SINE MIR -77 185 77 290 197 30 0 chr20 504474 504540 -71649342 + L3 LINE CR1 1405 1472 -105 232 174 22 0 chr20 504657 504703 -71649179 - Charlie8 DNA MER1_type -1003 1414 1368 783 245 180 11 chr20 505035 505313 -71648569 + LTR16C LTR ERVL 167 491 0 367 221 74 32 chr20 505931 506026 -71647856 - L2 LINE L2 -6 3266 3168 243 309 64 21 chr20 506098 506192 -71647690 - L2 LINE L2 -248 3065 2968 1724 170 3 19 chr20 506228 506545 -71647337 - AluJb SINE Alu 0 312 1 1244 238 31 48 chr20 506813 507221 -71646661 + MLT1J LTR MaLR 1 437 -74 2078 111 3 10 chr20 507280 507586 -71646296 + AluSx SINE Alu 9 312 0 474 340 0 13 chr20 507994 508153 -71645729 + MIR3 SINE MIR 45 201 -7 315 71 0 0 chr20 508244 508286 -71645596 + (CA)n Simple_repeat Simple_repeat 1 42 0 7301 31 0 0 chr20 508411 509713 -71644169 - L1PA5 LINE L1 -3 6151 4848 580 311 36 0 chr20 509716 509912 -71643970 + MIR SINE MIR 57 259 -3 344 335 55 0 chr20 510140 510304 -71643578 + MIR SINE MIR 90 262 0 954 80 7 0 chr20 510346 510484 -71643398 + L1MA2 LINE L1 6166 6304 0 242 274 59 13 chr20 510614 510767 -71643115 + (TTCA)n Simple_repeat Simple_repeat 4 163 0 * 439 220 27 65 chr20 510735 510921 -71642961 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 312 293 35 23 chr20 510868 511042 -71642840 + (TTCA)n Simple_repeat Simple_repeat 4 179 0 * 262 344 53 64 chr20 511304 511586 -71642296 - L2 LINE L2 0 3272 2994 2226 87 0 78 chr20 511594 511927 -71641955 - AluSx SINE Alu -5 307 1 234 279 58 19 chr20 511944 512048 -71641834 - MIR SINE MIR -67 141 34 1576 152 93 24 chr20 512305 512595 -71641287 + AluJo SINE Alu 1 310 -2 2058 146 7 0 chr20 512657 512952 -71640930 + AluSx SINE Alu 6 302 -10 483 291 0 33 chr20 512978 513129 -71640753 - MIR SINE MIR -14 248 103 2208 98 3 29 chr20 513487 513794 -71640088 - AluSx SINE Alu -11 301 3 1004 182 0 0 chr20 513855 514020 -71639862 + FRAM SINE Alu 1 165 -11 856 266 47 7 chr20 514026 514363 -71639519 - MLT1J LTR MaLR -135 376 6 224 284 68 34 chr20 514427 514515 -71639367 + L2 LINE L2 3133 3223 -49 267 219 24 37 chr20 514940 515022 -71638860 + CT-rich Low_complexity Low_complexity 4 84 0 248 270 11 0 chr20 515036 515125 -71638757 + L1MC4 LINE L1 6614 6703 -1339 313 203 17 0 chr20 515271 515330 -71638552 + L1MC4 LINE L1 6644 6703 -1339 210 143 0 0 chr20 515330 515365 -71638517 + (TG)n Simple_repeat Simple_repeat 1 35 0 464 317 10 63 chr20 515365 515570 -71638312 - L2 LINE L2 -18 3295 3102 2361 102 3 0 chr20 515639 515943 -71637939 - AluSg SINE Alu -5 305 1 1153 218 17 59 chr20 515947 516181 -71637701 - LTR37A LTR ERV1 -8 418 207 1798 140 13 39 chr20 516181 516488 -71637394 - AluJb SINE Alu -13 299 1 1153 218 17 59 chr20 516488 516657 -71637225 - LTR37A LTR ERV1 -219 207 32 243 312 26 0 chr20 516727 516804 -71637078 - L2 LINE L2 -31 3241 3163 5411 137 30 16 chr20 516884 517882 -71636000 - Tigger3b DNA MER2_type 0 1231 220 1518 94 5 0 chr20 517882 518074 -71635808 - AluSp SINE Alu -12 301 109 1664 169 55 48 chr20 518081 518501 -71635381 - MER113 DNA MER1_type? -74 447 25 266 214 14 0 chr20 518541 518611 -71635271 - MIR3 SINE MIR -54 154 84 1356 276 45 17 chr20 519013 519433 -71634449 + MLT1K LTR MaLR 61 492 -96 1268 204 6 100 chr20 519468 519481 -71634401 - AluSp SINE Alu -6 307 294 216 0 0 0 chr20 519481 519505 -71634377 + (TTAAA)n Simple_repeat Simple_repeat 4 27 0 1268 204 6 100 chr20 519505 519830 -71634052 - AluSp SINE Alu -19 294 1 284 98 98 0 chr20 519832 519883 -71633999 - FLAM_A SINE Alu -4 129 74 258 32 0 0 chr20 519900 519931 -71633951 + (CA)n Simple_repeat Simple_repeat 2 32 0 302 145 0 16 chr20 519933 519995 -71633887 + MLT1K LTR MaLR 525 585 -3 546 274 30 38 chr20 520358 520595 -71633287 - L2 LINE L2 -1 3312 3078 443 121 50 177 chr20 520604 520745 -71633137 + L1MB4 LINE L1 6058 6180 0 724 256 75 10 chr20 520752 521108 -71632774 - L2 LINE L2 -228 3085 2704 2134 129 7 0 chr20 521243 521537 -71632345 - AluSx SINE Alu -14 298 3 211 264 0 94 chr20 522010 522116 -71631766 + L2 LINE L2 3218 3313 0 549 330 24 5 chr20 522181 522387 -71631495 - MIR SINE MIR 0 262 53 1721 158 7 52 chr20 522543 522853 -71631029 - AluJo SINE Alu -16 296 1 2397 103 0 0 chr20 522865 523166 -71630716 - AluSx SINE Alu -11 301 1 446 281 39 59 chr20 523310 523513 -71630369 + L1MC4a LINE L1 5691 5889 -1919 1664 156 11 35 chr20 523515 523798 -71630084 - AluJb SINE Alu -36 276 1 321 281 39 55 chr20 523799 523927 -71629955 + L1MC4a LINE L1 5856 5981 -1827 426 221 0 10 chr20 523965 524069 -71629813 + MIR SINE MIR 158 260 -2 1349 57 0 0 chr20 524081 524239 -71629643 + AluY SINE Alu 146 303 -8 2317 108 0 6 chr20 524344 524658 -71629224 - AluSx SINE Alu 0 312 1 2059 152 10 0 chr20 524690 524999 -71628883 + AluJb SINE Alu 1 312 0 180 0 0 0 chr20 525242 525262 -71628620 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2286 116 7 0 chr20 525855 526165 -71627717 + AluSx SINE Alu 1 312 0 249 294 151 0 chr20 526239 526365 -71627517 + MIR SINE MIR 48 192 -70 292 275 90 3 chr20 526464 526653 -71627229 + MIR SINE MIR 2 262 0 308 270 73 36 chr20 526928 527065 -71626817 + L2 LINE L2 3162 3303 -10 488 246 183 6 chr20 527176 527351 -71626531 + MIR SINE MIR 32 237 -25 621 213 54 81 chr20 527400 527579 -71626303 + MIR SINE MIR 12 183 -79 2083 137 0 0 chr20 527579 527872 -71626010 - AluSx SINE Alu -18 294 2 621 213 54 81 chr20 527872 527950 -71625932 + MIR SINE MIR 183 262 0 239 277 50 10 chr20 528048 528149 -71625733 - MIR SINE MIR -76 132 28 902 232 31 105 chr20 528558 528768 -71625114 - L1MC4 LINE L1 0 8042 7881 1914 68 124 11 chr20 528768 529034 -71624848 - AluSg1 SINE Alu -13 296 1 902 232 31 105 chr20 529034 529272 -71624610 - L1MC4 LINE L1 -161 7881 7627 1915 142 28 3 chr20 529464 529753 -71624129 + AluJb SINE Alu 1 296 -16 198 308 33 0 chr20 529876 529967 -71623915 + MIR SINE MIR 34 127 -81 222 289 70 26 chr20 530027 530141 -71623741 + MIR SINE MIR 26 144 -64 364 318 128 5 chr20 530479 530690 -71623192 + L1MC4a LINE L1 5740 5976 -1832 686 200 13 26 chr20 530843 530998 -71622884 + L1ME3A LINE L1 6016 6168 -2 2436 88 3 0 chr20 531001 531297 -71622585 + AluSx SINE Alu 1 297 -15 1849 152 13 23 chr20 531365 531668 -71622214 + AluJo SINE Alu 1 300 -12 196 322 34 8 chr20 532013 532131 -71621751 - MIR3 SINE MIR -86 122 2 195 214 36 18 chr20 532439 532495 -71621387 + MIR SINE MIR 97 153 -55 182 363 99 0 chr20 532473 532564 -71621318 + L2 LINE L2 3163 3262 -10 * 553 91 0 0 chr20 532688 532765 -71621117 + FLAM_A SINE Alu 58 134 -8 313 283 78 6 chr20 533255 533421 -71620461 + L1MC4a LINE L1 5748 5925 -1883 192 135 0 0 chr20 533900 533937 -71619945 + (CA)n Simple_repeat Simple_repeat 1 37 0 335 317 43 6 chr20 534312 534476 -71619406 + L1MC4a LINE L1 5724 5893 -1915 1306 98 0 0 chr20 534602 534766 -71619116 - AluSc SINE Alu -24 285 122 220 265 84 12 chr20 535437 535520 -71618362 - MIR SINE MIR -100 108 20 274 222 0 42 chr20 536001 536073 -71617809 + MIR SINE MIR 104 172 -90 2417 83 0 7 chr20 536132 536434 -71617448 + AluSx SINE Alu 1 300 -12 574 279 131 18 chr20 536494 536723 -71617159 + MIR SINE MIR 8 262 0 290 297 187 7 chr20 537367 537522 -71616360 + MIR SINE MIR 37 219 -43 284 264 138 18 chr20 538839 539006 -71614876 + MIR SINE MIR 73 259 -3 22 70 0 0 chr20 539350 539393 -71614489 + GC_rich Low_complexity Low_complexity 1 43 0 232 205 51 17 chr20 539606 539723 -71614159 + (CCG)n Simple_repeat Simple_repeat 1 121 0 28 71 0 0 chr20 539876 539932 -71613950 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr20 539960 539997 -71613885 + GC_rich Low_complexity Low_complexity 1 37 0 209 170 0 21 chr20 540231 540278 -71613604 + MIR SINE MIR 94 139 -69 352 265 106 41 chr20 540332 540502 -71613380 - MER5A DNA MER1_type -2 187 7 519 266 40 0 chr20 540619 540743 -71613139 - L2 LINE L2 -1 3312 3184 350 242 121 0 chr20 541929 542053 -71611829 + MIR SINE MIR 108 246 -16 419 258 177 43 chr20 542198 542497 -71611385 + L2 LINE L2 2834 3172 -141 * 453 200 0 0 chr20 542486 542566 -71611316 - L2 LINE L2 0 3313 3234 640 256 92 29 chr20 542620 542827 -71611055 - MIR SINE MIR -29 233 14 343 268 10 0 chr20 543625 543737 -71610145 - L1M3 LINE L1 -601 5579 5468 1921 79 12 0 chr20 543806 544047 -71609835 + AluSx SINE Alu 34 277 -35 225 0 0 0 chr20 544048 544073 -71609809 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 777 98 0 0 chr20 544072 544184 -71609698 + (TA)n Simple_repeat Simple_repeat 1 112 0 193 267 0 0 chr20 544352 544397 -71609485 - MIR SINE MIR 0 262 218 1513 199 59 3 chr20 544498 544820 -71609062 + MLT1F LTR MaLR 1 340 -202 241 157 12 108 chr20 544882 544900 -71608982 + MLT1G LTR MaLR 468 486 -104 1927 152 0 23 chr20 544900 545203 -71608679 + AluJo SINE Alu 1 296 -16 241 157 12 108 chr20 545203 545267 -71608615 + MLT1G LTR MaLR 486 590 0 893 259 95 39 chr20 545273 545609 -71608273 - MLT1J LTR MaLR -143 368 14 1053 215 18 0 chr20 545659 545882 -71608000 + MIR SINE MIR 15 241 -21 2024 124 28 0 chr20 545920 546211 -71607671 - AluSq SINE Alu -14 299 1 214 293 17 0 chr20 546327 546385 -71607497 + L2 LINE L2 3255 3313 0 410 257 20 72 chr20 546620 546745 -71607137 - MER103 DNA DNA -10 156 39 1704 192 10 45 chr20 546745 547058 -71606824 - AluJb SINE Alu -10 302 1 410 257 20 72 chr20 547058 547084 -71606798 - MER103 DNA DNA -127 39 13 778 202 96 6 chr20 547420 547598 -71606284 - MIR SINE MIR -3 259 66 1212 234 135 11 chr20 547985 548353 -71605529 + MLT1G LTR MaLR 168 577 -13 3069 191 16 35 chr20 548431 548956 -71604926 + MER82 DNA MER2_type 1 513 -140 2357 93 0 0 chr20 548956 549246 -71604636 - AluSc SINE Alu -19 290 1 3069 191 16 35 chr20 549246 549385 -71604497 + MER82 DNA MER2_type 513 653 0 533 238 41 17 chr20 549570 549760 -71604122 - MIR SINE MIR -44 218 25 193 171 0 0 chr20 549817 549852 -71604030 + L2 LINE L2 3216 3250 -22 1927 161 3 3 chr20 600206 600505 -71553377 - AluJb SINE Alu -13 299 1 286 284 176 6 chr20 600539 600715 -71553167 - L1MC4 LINE L1 -8 8034 7829 280 274 77 30 chr20 600908 601076 -71552806 + MER113 DNA MER1_type? 283 458 -63 471 231 30 22 chr20 601728 601862 -71552020 - MLT1J LTR MaLR -363 148 14 1113 215 18 0 chr20 601912 602135 -71551747 + MIR SINE MIR 15 241 -21 2008 124 28 0 chr20 602173 602463 -71551419 - AluSq SINE Alu -15 298 1 216 318 16 0 chr20 602574 602637 -71551245 + L2 LINE L2 3250 3313 0 375 263 20 72 chr20 602872 602997 -71550885 - MER103 DNA DNA -10 156 39 1711 192 10 45 chr20 602997 603310 -71550572 - AluJb SINE Alu -10 302 1 375 263 20 72 chr20 603310 603336 -71550546 - MER103 DNA DNA -127 39 13 804 219 115 0 chr20 603672 603855 -71550027 - MIR SINE MIR -3 259 56 1157 234 135 11 chr20 604237 604605 -71549277 + MLT1G LTR MaLR 168 577 -13 3268 191 16 35 chr20 604683 605208 -71548674 + MER82 DNA MER2_type 1 513 -140 2344 93 0 0 chr20 605208 605498 -71548384 - AluSc SINE Alu -19 290 1 3268 191 16 35 chr20 605498 605637 -71548245 + MER82 DNA MER2_type 513 653 0 566 238 41 17 chr20 605822 606012 -71547870 - MIR SINE MIR -44 218 25 202 225 0 0 chr20 606064 606104 -71547778 + L2 LINE L2 3211 3250 -22 271 120 245 18 chr20 606748 606830 -71547052 + MIR3 SINE MIR 70 164 -44 365 320 54 0 chr20 606923 607070 -71546812 - MIR SINE MIR -106 156 2 348 330 172 21 chr20 607091 607324 -71546558 + L2 LINE L2 2948 3215 -57 1918 156 0 3 chr20 607415 607698 -71546184 + AluJb SINE Alu 11 292 -20 1363 213 295 2 chr20 607698 608111 -71545771 + MLT1G LTR MaLR 57 590 0 1071 223 116 57 chr20 608112 608801 -71545081 + L2 LINE L2 2570 3313 0 318 276 142 8 chr20 609405 609532 -71544350 + MIR SINE MIR 119 262 0 1873 168 6 22 chr20 609788 610103 -71543779 + AluJo SINE Alu 1 310 -2 625 285 7 0 chr20 610163 610314 -71543568 + MIR SINE MIR 45 196 -66 251 217 84 24 chr20 610322 610405 -71543477 - MIR SINE MIR -85 177 90 276 229 34 30 chr20 610758 610863 -71543019 + L1MC4a LINE L1 5514 5612 -598 * 432 256 30 67 chr20 610825 610989 -71542893 - L2 LINE L2 -9 3304 3147 1218 237 104 64 chr20 611162 611693 -71542189 + MLT1H1 LTR MaLR 4 555 0 241 240 0 0 chr20 611696 611746 -71542136 + L1MC4a LINE L1 5611 5660 -510 464 337 30 0 chr20 612129 612331 -71541551 + L1MC4a LINE L1 5714 5921 -1887 2213 112 0 0 chr20 612826 613122 -71540760 - AluSg SINE Alu -14 296 1 1285 244 71 92 chr20 613152 613726 -71540156 + MLT1F1 LTR MaLR 6 567 0 762 95 0 63 chr20 613859 613985 -71539897 - AluSp/q SINE Alu -4 309 192 358 318 36 41 chr20 614042 614237 -71539645 - L1ME3A LINE L1 -284 5886 5693 367 294 76 46 chr20 614378 614575 -71539307 + L2 LINE L2 3108 3310 -3 201 276 86 0 chr20 614587 614645 -71539237 + MIR3 SINE MIR 104 166 -42 662 259 71 13 chr20 614780 615004 -71538878 - MIR SINE MIR 0 262 26 1634 148 7 14 chr20 615222 615500 -71538382 - AluJo SINE Alu -36 276 1 847 257 21 22 chr20 615503 615752 -71538130 - MIR SINE MIR -13 249 3 222 171 49 0 chr20 615911 615952 -71537930 + polypurine Low_complexity Low_complexity 5 47 0 543 335 144 17 chr20 615993 616161 -71537721 + L2 LINE L2 2791 2936 -336 2218 110 0 7 chr20 616161 616471 -71537411 + AluSx SINE Alu 2 309 -3 543 335 144 17 chr20 616471 616713 -71537169 + L2 LINE L2 2936 3251 -21 187 274 20 0 chr20 616744 616795 -71537087 + L2 LINE L2 3221 3272 0 530 303 7 7 chr20 616979 617134 -71536748 + MIR SINE MIR 77 231 -31 2723 185 27 119 chr20 617182 617644 -71536238 - L1MC4 LINE L1 0 8042 7539 1918 123 32 0 chr20 617644 617928 -71535954 - AluSx SINE Alu -18 294 2 2723 185 27 119 chr20 617928 617985 -71535897 - L1MC4 LINE L1 -503 7539 7478 183 42 0 0 chr20 617985 618009 -71535873 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2157 89 3 3 chr20 618013 618295 -71535587 - AluSq SINE Alu -31 282 1 2723 185 27 119 chr20 618295 618717 -71535165 - L1MC4 LINE L1 -567 7475 7182 317 328 61 22 chr20 618775 619004 -71534878 - L1MC4a LINE L1 -1741 6067 5830 256 247 0 27 chr20 619058 619131 -71534751 - MIR3 SINE MIR -51 157 87 211 217 132 38 chr20 619655 619761 -71534121 + MIR SINE MIR 16 131 -77 581 205 214 3 chr20 620984 621156 -71532726 - MIR SINE MIR -32 230 25 434 245 31 44 chr20 621493 621652 -71532230 + MIR3 SINE MIR 20 176 -32 230 263 0 18 chr20 621642 621699 -71532183 + L2 LINE L2 3008 3063 -209 * 218 264 0 0 chr20 621769 621822 -71532060 - L2 LINE L2 -4 3268 3216 192 220 40 0 chr20 621858 621908 -71531974 + L2 LINE L2 3262 3313 0 859 219 36 101 chr20 621944 622332 -71531550 - MER113 DNA MER1_type? 0 521 159 855 198 6 6 chr20 622393 622565 -71531317 + L1ME1 LINE L1 5986 6157 -9 1689 146 47 7 chr20 622590 622864 -71531018 + AluSx SINE Alu 1 285 -27 405 54 0 0 chr20 622864 622920 -71530962 + (CCA)n Simple_repeat Simple_repeat 3 58 0 313 179 0 0 chr20 622929 622985 -71530897 - MER113 DNA MER1_type? -432 89 34 252 310 0 0 chr20 623013 623084 -71530798 + (TGAA)n Simple_repeat Simple_repeat 3 73 0 393 306 135 39 chr20 623093 623322 -71530560 - L3 LINE CR1 -74 1503 1253 523 297 160 20 chr20 623383 623689 -71530193 - L2 LINE L2 -92 3221 2873 1555 168 3 46 chr20 623891 624040 -71529842 + AluJo SINE Alu 1 132 -180 2203 100 7 7 chr20 624040 624340 -71529542 + AluSg SINE Alu 1 300 -10 1555 168 3 46 chr20 624340 624493 -71529389 + AluJo SINE Alu 132 290 -22 745 292 50 0 chr20 624523 624742 -71529140 + MIR SINE MIR 12 241 -21 2002 116 14 0 chr20 624956 625249 -71528633 - AluSx SINE Alu -15 297 1 2208 106 0 0 chr20 625435 625737 -71528145 - AluSg SINE Alu -8 302 1 870 235 53 62 chr20 625907 626453 -71527429 + L2 LINE L2 2710 3267 -46 334 154 31 0 chr20 626834 626899 -71526983 - MIR SINE MIR -92 170 104 598 188 56 42 chr20 626920 627064 -71526818 + MIR SINE MIR 117 262 0 292 241 24 12 chr20 627072 627155 -71526727 - MIR SINE MIR -149 113 30 1527 177 33 20 chr20 627167 627467 -71526415 + AluJo SINE Alu 5 308 -4 203 170 21 0 chr20 627480 627527 -71526355 + (CAA)n Simple_repeat Simple_repeat 3 50 0 247 293 15 21 chr20 627937 628272 -71525610 + (GGGTG)n Simple_repeat Simple_repeat 1 332 0 192 361 0 50 chr20 628611 628730 -71525152 + MIR SINE MIR 76 188 -74 180 125 0 0 chr20 629165 629197 -71524685 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 309 318 19 34 chr20 629389 629569 -71524313 + L1ME LINE L1 5483 5646 -524 749 251 138 10 chr20 629715 629830 -71524052 - L2 LINE L2 0 3313 3214 1768 157 7 20 chr20 629830 630135 -71523747 + AluJo SINE Alu 1 301 -11 749 251 138 10 chr20 630135 630310 -71523572 - L2 LINE L2 -99 3214 2986 31 44 0 0 chr20 630534 630579 -71523303 + AT_rich Low_complexity Low_complexity 1 45 0 1516 170 20 30 chr20 630596 630896 -71522986 + AluJo SINE Alu 1 297 -15 877 150 0 0 chr20 630939 631072 -71522810 + AluSq/x SINE Alu 1 133 -179 188 229 66 33 chr20 631238 631299 -71522583 - L2 LINE L2 -202 3070 3008 198 296 83 22 chr20 631795 631913 -71521969 - MIR SINE MIR -65 143 60 708 185 7 46 chr20 631989 632102 -71521780 + MER5A DNA MER1_type 2 109 -80 1617 147 65 4 chr20 632102 632381 -71521501 + AluJb SINE Alu 1 296 -16 708 185 7 46 chr20 632381 632418 -71521464 + MER5A DNA MER1_type 109 146 -43 1476 136 36 0 chr20 632480 632731 -71521151 - L1MD3 LINE L1 -3 7992 7733 1831 234 29 39 chr20 633216 633699 -71520183 + MLT1H LTR MaLR 72 549 0 528 305 105 42 chr20 633701 634226 -71519656 + MLT1J LTR MaLR 36 500 -11 446 139 222 9 chr20 634924 635032 -71518850 - MER63 DNA MER1_type -77 759 3 260 283 121 46 chr20 635038 635211 -71518671 - L2 LINE L2 -34 3279 3094 2245 108 0 0 chr20 635271 635576 -71518306 + AluSx SINE Alu 1 305 -7 889 226 51 23 chr20 635595 635812 -71518070 + MIR SINE MIR 36 258 -4 705 328 128 18 chr20 635817 636362 -71517520 - L2 LINE L2 -337 2977 2373 326 331 143 11 chr20 636458 636633 -71517249 + MIR SINE MIR 2 199 -63 2176 192 90 13 chr20 636709 637177 -71516705 + MLT1D LTR MaLR 2 505 0 2105 83 0 0 chr20 637275 637552 -71516330 + AluSx SINE Alu 23 299 -13 396 279 168 37 chr20 637768 638066 -71515816 - L2 LINE L2 -41 3272 2936 432 312 81 6 chr20 638380 638553 -71515329 + MIR SINE MIR 7 192 -70 433 214 70 14 chr20 638612 638748 -71515134 - MIR3 SINE MIR -36 172 34 34 65 0 0 chr20 638944 639006 -71514876 + GC_rich Low_complexity Low_complexity 1 62 0 25 0 0 0 chr20 639101 639126 -71514756 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr20 639386 639409 -71514473 + GC_rich Low_complexity Low_complexity 1 23 0 945 253 17 11 chr20 639540 639767 -71514115 - MIR SINE MIR -32 230 3 805 252 75 52 chr20 640621 640745 -71513137 - MLT1L LTR MaLR -40 575 455 2020 127 7 0 chr20 640745 641037 -71512845 + AluSx SINE Alu 1 294 -18 805 252 75 52 chr20 641037 641218 -71512664 - MLT1L LTR MaLR -160 455 263 486 298 0 0 chr20 641234 641385 -71512497 + L2 LINE L2 2830 2980 -333 467 233 47 23 chr20 641390 641519 -71512363 - MIR SINE MIR -4 258 127 375 174 92 18 chr20 641721 641830 -71512052 + LTR16C LTR ERVL 375 491 0 686 244 80 10 chr20 641874 642075 -71511807 + MIR SINE MIR 45 259 -3 338 185 43 33 chr20 642143 642235 -71511647 - MLT1K LTR MaLR 0 588 496 1340 274 40 44 chr20 642340 642841 -71511041 - MLT1J LTR MaLR -12 499 1 359 275 63 58 chr20 643008 643197 -71510685 - L2 LINE L2 -5 3308 3119 647 173 18 0 chr20 643218 643328 -71510554 - MLT1A1 LTR MaLR 0 365 254 673 122 15 76 chr20 643330 643461 -71510421 + MLT1A1 LTR MaLR 17 139 -226 423 107 0 0 chr20 643461 643517 -71510365 - Alu SINE Alu -16 296 241 2046 196 25 27 chr20 643517 643957 -71509925 + MLT1-int LTR MaLR 180 618 -1117 233 250 16 0 chr20 644001 644065 -71509817 + MLT1-int LTR MaLR 821 885 -486 392 148 0 0 chr20 644111 644172 -71509710 + MLT-int LTR MaLR 681 741 -994 2284 145 25 27 chr20 644385 644793 -71509089 + MLT1A2-int LTR MaLR 1317 1723 -12 605 110 33 0 chr20 644812 644903 -71508979 + MLT1A2 LTR MaLR 1 94 -280 401 214 36 0 chr20 645005 645089 -71508793 - MLT1L LTR MaLR -337 278 192 1812 112 0 12 chr20 645940 646028 -71507854 + AluSx SINE Alu 48 136 -176 2080 109 16 0 chr20 646028 646331 -71507551 + AluSc SINE Alu 1 308 -1 1812 112 0 12 chr20 646331 646501 -71507381 + AluSx SINE Alu 136 303 -9 252 304 205 9 chr20 646874 646986 -71506896 - L3 LINE CR1 -117 1460 1327 261 128 0 0 chr20 648465 648512 -71505370 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 266 168 50 40 chr20 649990 650091 -71503791 + C-rich Low_complexity Low_complexity 5 106 0 308 286 150 29 chr20 650566 650741 -71503141 - MIR SINE MIR -66 196 3 337 233 0 92 chr20 650753 650873 -71503009 + MIR SINE MIR 105 213 -49 * 465 261 72 0 chr20 650848 650986 -71502896 - MIR SINE MIR -4 258 111 262 229 16 0 chr20 651103 651164 -71502718 + L2 LINE L2 3252 3313 0 226 288 72 27 chr20 651887 651998 -71501884 + L2 LINE L2 3155 3270 -2 502 236 241 11 chr20 652286 652460 -71501422 - MIR SINE MIR 0 262 49 298 259 170 0 chr20 652471 652583 -71501299 + L2 LINE L2 3140 3270 -2 443 254 44 0 chr20 652838 652952 -71500930 + MIR SINE MIR 3 121 -141 631 284 91 0 chr20 652995 653192 -71500690 - MIR SINE MIR 0 262 48 260 255 122 10 chr20 653679 653777 -71500105 + MIR3 SINE MIR 74 182 -26 416 214 255 0 chr20 653874 654019 -71499863 + MIR SINE MIR 81 262 0 292 116 0 0 chr20 654104 654147 -71499735 + MIR SINE MIR 81 123 -85 285 266 45 103 chr20 654303 654487 -71499395 + MIR SINE MIR 18 182 -49 189 222 48 32 chr20 654793 654856 -71499026 - MIR SINE MIR -86 122 59 285 380 83 8 chr20 655077 655315 -71498567 - MIR SINE MIR 0 262 1 240 200 46 15 chr20 656420 656485 -71497397 + MIR SINE MIR 84 150 -112 316 316 98 0 chr20 656789 656922 -71496960 - MIR3 SINE MIR -14 194 49 408 88 0 0 chr20 658240 658297 -71495585 + (TG)n Simple_repeat Simple_repeat 1 57 0 332 89 0 63 chr20 658568 658647 -71495235 + (TCCC)n Simple_repeat Simple_repeat 2 75 0 465 262 93 27 chr20 659179 659362 -71494520 - MIR3 SINE MIR -3 205 11 294 182 0 0 chr20 660185 660251 -71493631 + CT-rich Low_complexity Low_complexity 2 67 0 378 0 0 0 chr20 660251 660293 -71493589 + (CA)n Simple_repeat Simple_repeat 1 42 0 429 20 0 0 chr20 660540 660590 -71493292 + (TG)n Simple_repeat Simple_repeat 2 51 0 202 138 69 35 chr20 661444 661502 -71492380 + (CGCGG)n Simple_repeat Simple_repeat 2 61 0 413 306 6 30 chr20 661816 662038 -71491844 + GA-rich Low_complexity Low_complexity 4 211 0 209 176 0 0 chr20 662620 662654 -71491228 + G-rich Low_complexity Low_complexity 3 36 0 1818 149 0 35 chr20 663146 663457 -71490425 + AluJo SINE Alu 8 308 0 1555 97 5 5 chr20 663744 663951 -71489931 - AluSq SINE Alu -16 297 91 389 256 99 19 chr20 664014 664276 -71489606 + L2 LINE L2 2856 3200 -72 883 232 11 0 chr20 664301 664486 -71489396 + MIR SINE MIR 59 245 -17 638 270 110 30 chr20 664610 664910 -71488972 - L2 LINE L2 -103 3210 2887 207 69 0 0 chr20 664971 665000 -71488882 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 356 288 181 51 chr20 665681 665973 -71487909 + L1ME4a LINE L1 5624 5953 -168 2368 92 0 0 chr20 666061 666353 -71487529 + AluSc SINE Alu 1 292 -17 789 217 118 28 chr20 666620 666832 -71487050 + MIR SINE MIR 32 262 0 205 300 0 17 chr20 666830 666890 -71486992 - MIR SINE MIR -56 206 148 * 328 239 216 8 chr20 667237 667371 -71486511 + MIR3 SINE MIR 20 181 -27 923 281 109 12 chr20 667646 668069 -71485813 - LTR16B LTR ERVL 0 464 1 945 266 20 4 chr20 668087 668339 -71485543 - MIR SINE MIR -5 257 2 237 235 147 29 chr20 668492 668594 -71485288 + L2 LINE L2 2889 3002 -270 920 244 33 8 chr20 668660 668902 -71484980 - MIR SINE MIR -5 257 10 371 259 36 36 chr20 669000 669112 -71484770 + L2 LINE L2 3201 3312 -1 2401 109 0 0 chr20 669281 669592 -71484290 + AluSx SINE Alu 1 311 -1 1881 173 7 3 chr20 669865 670171 -71483711 - AluJo SINE Alu -5 307 1 402 283 17 0 chr20 670171 670300 -71483582 + MIR SINE MIR 43 175 -62 181 276 19 67 chr20 670344 670449 -71483433 - MIR3 SINE MIR -27 181 82 345 324 150 19 chr20 670866 671079 -71482803 + MIR SINE MIR 22 262 0 291 279 45 9 chr20 671301 671412 -71482470 - MIR SINE MIR -58 204 90 1914 155 13 10 chr20 671413 671548 -71482334 + AluSx SINE Alu 1 134 -178 441 0 0 0 chr20 671548 671597 -71482285 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1914 155 13 10 chr20 671597 671795 -71482087 + AluSx SINE Alu 134 312 0 802 280 85 0 chr20 671824 672010 -71481872 - L2 LINE L2 -14 3299 3081 2719 30 0 0 chr20 672010 672308 -71481574 + AluY SINE Alu 1 298 -13 802 280 85 0 chr20 672308 672392 -71481490 - L2 LINE L2 -232 3081 3006 334 250 52 59 chr20 672575 672711 -71481171 + MIR SINE MIR 93 227 -35 466 320 31 35 chr20 672888 673116 -71480766 + LTR67 LTR ERVL 236 462 -95 284 293 71 0 chr20 673292 673391 -71480491 + L2 LINE L2 3208 3313 0 588 341 14 9 chr20 673397 673611 -71480271 - L3 LINE CR1 -398 1179 965 476 281 43 7 chr20 673753 673892 -71479990 + MER117 DNA MER1_type 1 144 -53 1308 172 15 11 chr20 673931 674198 -71479684 + Charlie4 DNA MER1_type 8 275 -1686 264 282 128 40 chr20 674383 674532 -71479350 - L2 LINE L2 -196 3076 2915 390 316 11 17 chr20 675407 675584 -71478298 + MIR SINE MIR 9 184 -78 467 208 87 54 chr20 675658 675807 -71478075 - L2 LINE L2 0 3313 3160 495 253 139 21 chr20 675822 676016 -71477866 + L1MC4 LINE L1 5620 5836 -1972 357 150 0 0 chr20 676026 676086 -71477796 - FLAM_A SINE Alu 0 133 74 5802 217 70 33 chr20 676486 676671 -71477211 + L1MC4 LINE L1 6459 6636 -1406 423 0 0 0 chr20 676671 676718 -71477164 + (TG)n Simple_repeat Simple_repeat 1 47 0 5802 217 70 33 chr20 676718 678058 -71475824 + L1MC4 LINE L1 6636 8040 -2 613 283 62 0 chr20 678076 678316 -71475566 - L2 LINE L2 -152 3161 2907 953 211 29 5 chr20 678316 678525 -71475357 - MLT1E2 LTR MaLR 0 626 413 240 111 0 0 chr20 678525 678561 -71475321 + (T)n Simple_repeat Simple_repeat 1 36 0 1428 206 45 13 chr20 678571 678950 -71474932 - HUERS-P3 LTR ERV1 -8453 466 1 617 157 35 76 chr20 678950 679122 -71474760 - LTR19C LTR ERV1 0 779 615 * 780 207 181 50 chr20 679097 679362 -71474520 - MLT1E2 LTR MaLR -178 448 138 2508 131 33 17 chr20 679362 679590 -71474292 - MSTB LTR MaLR 0 426 186 2131 142 0 6 chr20 679590 679901 -71473981 - AluSx SINE Alu -3 309 1 2508 131 33 17 chr20 679901 680091 -71473791 - MSTB LTR MaLR -240 186 1 780 207 181 50 chr20 680091 680124 -71473758 - MLT1E2 LTR MaLR -488 138 111 451 156 142 78 chr20 680123 680264 -71473618 - MLT1E2 LTR MaLR -504 150 1 * 236 203 51 0 chr20 680266 680345 -71473537 - L2 LINE L2 -360 2912 2830 320 283 22 22 chr20 681046 681184 -71472698 - L1MC4a LINE L1 -1910 5898 5761 949 268 92 9 chr20 681422 681993 -71471889 - L1MC4a LINE L1 -461 5701 5067 768 219 128 45 chr20 682001 682026 -71471856 - L1ME4a LINE L1 -153 5968 5946 2429 73 0 7 chr20 682026 682329 -71471553 - AluY SINE Alu -9 302 2 768 219 128 45 chr20 682329 682677 -71471205 - L1ME4a LINE L1 -175 5946 5564 1714 128 23 79 chr20 683120 683425 -71470457 - AluJb SINE Alu -20 292 5 324 249 76 49 chr20 683612 683797 -71470085 - MER113 DNA MER1_type? -331 190 1 330 258 23 62 chr20 684018 684146 -71469736 - MIR SINE MIR -71 191 69 208 301 49 65 chr20 684264 684387 -71469495 - MIR SINE MIR 0 262 142 374 287 19 83 chr20 684422 684638 -71469244 - L2 LINE L2 -93 3220 3019 2519 81 0 3 chr20 684783 685090 -71468792 + AluSx SINE Alu 1 306 -6 370 253 44 0 chr20 685378 685469 -71468413 + MER91A DNA MER1_type 102 196 0 200 283 33 0 chr20 686234 686294 -71467588 - MIR SINE MIR -122 140 79 1725 138 18 25 chr20 686492 686774 -71467108 - AluJo SINE Alu -2 310 31 262 260 26 13 chr20 686911 686988 -71466894 + GA-rich Low_complexity Low_complexity 4 81 0 1790 89 133 0 chr20 687014 687262 -71466620 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr20 687262 687285 -71466597 + (CAAT)n Simple_repeat Simple_repeat 4 26 0 185 91 0 30 chr20 687300 687333 -71466549 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 654 270 11 0 chr20 687880 688065 -71465817 + MIR SINE MIR 43 229 -33 873 264 231 19 chr20 688301 688412 -71465470 + MLT1G LTR MaLR 10 96 -494 2176 75 24 27 chr20 688412 688725 -71465157 + AluSx SINE Alu 1 312 0 873 264 231 19 chr20 688725 689065 -71464817 + MLT1G LTR MaLR 96 588 -2 561 284 27 0 chr20 689069 689217 -71464665 - MIR SINE MIR -62 200 49 1482 255 56 33 chr20 689730 690158 -71463724 - MLT1J LTR MaLR 0 511 74 284 340 78 5 chr20 690234 690425 -71463457 + L2 LINE L2 2684 2888 -426 2236 119 3 0 chr20 690924 691217 -71462665 - AluSp SINE Alu -19 294 1 274 246 111 18 chr20 691218 691335 -71462547 - MIR SINE MIR -67 141 25 363 246 97 15 chr20 691409 691543 -71462339 - MIR3 SINE MIR -41 167 23 555 199 7 59 chr20 691555 691691 -71462191 - L2 LINE L2 -2 3311 3183 733 275 83 29 chr20 691785 692170 -71461712 - L2 LINE L2 -79 3234 2829 278 241 89 0 chr20 692702 692781 -71461101 + MIR3 SINE MIR 81 166 -42 838 244 43 26 chr20 692789 693019 -71460863 + MIR SINE MIR 29 262 0 363 295 108 23 chr20 693234 693363 -71460519 - MIR3 SINE MIR -27 181 42 1847 157 0 32 chr20 694102 694414 -71459468 - AluJo SINE Alu -10 302 1 282 227 213 57 chr20 694422 694563 -71459319 - MIR SINE MIR -17 245 83 2162 206 23 59 chr20 694699 695272 -71458610 + MER92C LTR ERV1 1 552 -2 185 318 94 57 chr20 695303 695495 -71458387 + MIR SINE MIR 63 261 -1 30 27 0 0 chr20 695881 695918 -71457964 + GC_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 696000 696022 -71457860 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 696972 696996 -71456886 + (TG)n Simple_repeat Simple_repeat 2 25 0 209 59 59 0 chr20 698306 698340 -71455542 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6365 234 82 48 chr20 698415 698563 -71455319 - L1MEc LINE L1 -3573 2642 2501 2361 94 0 7 chr20 698563 698860 -71455022 - AluSg SINE Alu -15 295 1 6365 234 82 48 chr20 698860 699391 -71454491 - L1MEc LINE L1 -3714 2501 1990 2161 113 25 0 chr20 699391 699674 -71454208 + AluSx SINE Alu 3 292 -20 6365 234 82 48 chr20 699674 701516 -71452366 - L1MEc LINE L1 -4225 1990 40 768 245 57 74 chr20 701518 701960 -71451922 - L2 LINE L2 -275 3038 2583 359 266 22 36 chr20 701981 702120 -71451762 + L1ME3A LINE L1 5991 6127 -43 631 279 11 0 chr20 702197 702380 -71451502 - L2 LINE L2 -710 2604 2420 275 296 99 0 chr20 702374 702455 -71451427 - MIR SINE MIR -17 245 157 * 803 290 120 3 chr20 702471 702771 -71451111 + MLT1K LTR MaLR 254 588 0 1900 170 3 0 chr20 702855 703143 -71450739 - AluJo SINE Alu -23 289 1 293 355 29 6 chr20 703494 703666 -71450216 + L2 LINE L2 2917 3092 -180 316 258 45 38 chr20 703845 703977 -71449905 + MIR3 SINE MIR 15 147 -61 726 228 151 15 chr20 703977 704183 -71449699 + MIR SINE MIR 2 235 -27 466 223 17 0 chr20 704291 704414 -71449468 + MIR3 SINE MIR 31 158 -50 2376 67 3 3 chr20 704527 704856 -71449026 + AluSq SINE Alu 1 329 0 221 327 44 0 chr20 705269 705382 -71448500 + MIR SINE MIR 34 151 -57 278 313 133 5 chr20 705434 705630 -71448252 - LTR16B LTR ERVL -228 222 3 205 273 0 0 chr20 706127 706171 -71447711 + (CA)n Simple_repeat Simple_repeat 2 45 0 528 239 159 0 chr20 706218 706381 -71447501 - MER5A DNA MER1_type 0 189 1 456 324 96 7 chr20 706460 706769 -71447113 - LTR16B LTR ERVL -136 328 31 323 299 95 7 chr20 706795 706932 -71446950 - MIR SINE MIR -22 240 92 266 214 135 0 chr20 707006 707095 -71446787 - MIR SINE MIR -112 150 50 194 196 0 43 chr20 707185 707231 -71446651 - MIR SINE MIR -59 149 106 1420 226 164 5 chr20 707827 708216 -71445666 + MLT1F1 LTR MaLR 109 559 -8 482 274 38 0 chr20 709164 709365 -71444517 + CT-rich Low_complexity Low_complexity 1 208 0 710 253 6 0 chr20 709370 709532 -71444350 + MIR SINE MIR 10 172 -90 520 223 122 0 chr20 710085 710224 -71443658 - MIR SINE MIR -19 243 88 189 0 0 0 chr20 710224 710245 -71443637 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 213 261 0 31 chr20 710282 710347 -71443535 - MIR SINE MIR -103 105 43 2419 96 0 0 chr20 710506 710808 -71443074 - AluSx SINE Alu -10 302 1 401 210 0 0 chr20 710827 710908 -71442974 - MIR SINE MIR -111 151 71 200 139 0 23 chr20 711167 711210 -71442672 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 403 58 0 0 chr20 711248 711300 -71442582 + Alu SINE Alu 1 52 -258 2532 84 3 0 chr20 711580 711891 -71441991 + AluSp SINE Alu 1 312 -1 264 307 58 2 chr20 712040 712168 -71441714 - MIR SINE MIR -55 153 50 221 271 32 47 chr20 712223 712335 -71441547 - MIR SINE MIR -85 123 13 805 190 226 0 chr20 712403 712624 -71441258 - LTR37B LTR ERV1 -1 467 197 387 236 0 11 chr20 712687 712776 -71441106 - LTR37B LTR ERV1 -377 91 4 302 60 100 0 chr20 713350 713450 -71440432 + (TA)n Simple_repeat Simple_repeat 2 111 0 315 49 0 0 chr20 713450 713491 -71440391 + (GA)n Simple_repeat Simple_repeat 2 42 0 2333 38 0 45 chr20 713491 713782 -71440100 - AluSp SINE Alu -34 279 2 212 236 121 73 chr20 715039 715204 -71438678 + L2 LINE L2 2569 2741 -573 2071 120 33 10 chr20 715270 715570 -71438312 + AluSx SINE Alu 1 307 -5 291 28 0 0 chr20 715597 715633 -71438249 + (TCC)n Simple_repeat Simple_repeat 1 36 0 1676 117 140 0 chr20 715633 715898 -71437984 - AluSx SINE Alu 0 302 1 1251 246 35 85 chr20 715899 716092 -71437790 - MLT1J LTR MaLR -67 444 282 2220 106 3 0 chr20 716092 716385 -71437497 - AluY SINE Alu -17 294 1 1251 246 35 85 chr20 716385 716614 -71437268 - MLT1J LTR MaLR -229 282 43 2317 110 0 0 chr20 716624 716916 -71436966 + AluSx SINE Alu 1 292 -20 929 270 25 0 chr20 716970 717211 -71436671 + L1MC4a LINE L1 5619 5865 -1943 1893 224 49 29 chr20 717213 717723 -71436159 + L1ME2 LINE L1 5564 6083 -81 288 296 107 34 chr20 718556 718606 -71435276 - L2 LINE L2 -79 3234 3189 1356 216 82 44 chr20 718606 719019 -71434863 + MLT1C LTR MaLR 1 434 -33 2062 159 0 9 chr20 719019 719334 -71434548 - AluSx SINE Alu 0 312 1 1356 216 82 44 chr20 719334 719370 -71434512 + MLT1C LTR MaLR 434 467 0 288 296 107 34 chr20 719370 719425 -71434457 - L2 LINE L2 -124 3189 3139 279 0 0 0 chr20 719425 719456 -71434426 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 288 296 107 34 chr20 719456 719555 -71434327 - L2 LINE L2 -174 3139 3014 252 0 0 0 chr20 720462 720490 -71433392 + (TG)n Simple_repeat Simple_repeat 2 29 0 523 182 0 0 chr20 720496 720584 -71433298 - FLAM_A SINE Alu -25 117 30 615 171 17 0 chr20 720604 720721 -71433161 - L1ME1 LINE L1 -56 6110 5992 2144 138 7 0 chr20 720775 721079 -71432803 + AluSx SINE Alu 1 306 -6 289 197 30 0 chr20 721086 721152 -71432730 + MLT1C LTR MaLR 40 107 -398 767 273 66 9 chr20 721152 721379 -71432503 + MLT1C LTR MaLR 228 467 0 1834 210 18 13 chr20 721379 721775 -71432107 - L1ME1 LINE L1 -187 5979 5582 1171 140 0 17 chr20 721775 721953 -71431929 + AluSg/x SINE Alu 133 307 -5 1845 161 0 13 chr20 721969 722267 -71431615 + AluJb SINE Alu 12 305 -7 317 137 0 0 chr20 722267 722318 -71431564 - L1ME1 LINE L1 -773 5586 5536 1141 130 243 45 chr20 722356 722603 -71431279 + AluYa5 SINE Alu 1 296 -15 244 160 160 40 chr20 722613 722688 -71431194 + MIR SINE MIR 150 233 -29 344 289 84 22 chr20 722833 723116 -71430766 - LTR16A LTR ERVL -2 448 123 375 273 62 45 chr20 723146 723322 -71430560 - Charlie8 DNA MER1_type -2226 191 13 2323 100 10 3 chr20 723345 723476 -71430406 + AluSq SINE Alu 1 130 -183 324 0 0 0 chr20 723476 723512 -71430370 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2323 100 10 3 chr20 723512 723691 -71430191 + AluSq SINE Alu 130 313 0 198 309 37 12 chr20 723764 723845 -71430037 + L2 LINE L2 3189 3271 -42 916 157 28 15 chr20 723933 724132 -71429750 + L1M4 LINE L1 5290 5492 -686 2554 72 3 0 chr20 724154 724461 -71429421 + AluSp SINE Alu 1 308 -5 724 254 11 37 chr20 724469 724658 -71429224 + MIR SINE MIR 77 260 -2 494 281 33 0 chr20 724674 724827 -71429055 + MIR SINE MIR 51 208 -54 802 177 10 62 chr20 725920 726112 -71427770 - MIR SINE MIR 0 262 81 1022 201 7 126 chr20 726142 726436 -71427446 - LTR8 LTR ERV1 -272 419 161 269 111 44 0 chr20 726428 726473 -71427409 - LTR8A LTR ERV1 -680 47 1 * 253 338 0 0 chr20 726473 726550 -71427332 - MIR SINE MIR -178 84 8 2370 99 0 0 chr20 726788 727090 -71426792 + AluSg SINE Alu 1 302 -8 2095 142 3 3 chr20 727168 727471 -71426411 + AluSx SINE Alu 1 303 -9 2008 122 165 8 chr20 727474 727844 -71426038 + MSTA LTR MaLR 1 428 0 787 213 77 0 chr20 727913 728082 -71425800 - MER63A DNA MER1_type -18 192 11 567 272 7 0 chr20 728119 728255 -71425627 + MIR SINE MIR 2 138 -124 396 0 0 0 chr20 728973 729017 -71424865 + (TC)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr20 729016 729047 -71424835 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 431 282 127 12 chr20 729214 729466 -71424416 + L2 LINE L2 2695 2975 -339 432 265 116 7 chr20 729524 729671 -71424211 + MIR SINE MIR 35 197 -65 325 268 187 28 chr20 729683 729831 -71424051 + MLT1G1 LTR MaLR 3 216 -379 3752 244 21 14 chr20 729831 730648 -71423234 + L1M4b LINE L1 3 825 -6034 3140 235 41 91 chr20 730653 730876 -71423006 + L1M4b LINE L1 1330 1563 -5394 2380 108 0 0 chr20 730876 731181 -71422701 + AluSx SINE Alu 1 305 -7 3140 235 41 91 chr20 731181 732433 -71421449 + L1M4b LINE L1 1563 2876 -4081 1614 161 19 58 chr20 732433 732744 -71421138 + AluSx SINE Alu 3 301 -11 3140 235 41 91 chr20 732744 732893 -71420989 + L1M4b LINE L1 2876 3031 -3926 2345 121 0 3 chr20 732893 733206 -71420676 + AluSx SINE Alu 1 312 0 3140 235 41 91 chr20 733206 733816 -71420066 + L1M4b LINE L1 3031 3670 -3287 2531 80 3 0 chr20 733816 734128 -71419754 + AluSp SINE Alu 1 313 0 3140 235 41 91 chr20 734128 734289 -71419593 + L1M4b LINE L1 3670 3565 -3392 2132 141 3 0 chr20 734289 734594 -71419288 - AluSx SINE Alu -4 308 3 3140 235 41 91 chr20 734594 734870 -71419012 + L1M4b LINE L1 3564 3852 -3105 2341 114 3 0 chr20 734871 735178 -71418704 + AluSx SINE Alu 1 308 -4 1265 117 11 0 chr20 735242 735450 -71418432 + AluY SINE Alu 119 311 0 1368 214 79 66 chr20 735452 735553 -71418329 + L1M4b LINE L1 3904 4002 -2955 2165 145 0 0 chr20 735553 735864 -71418018 + AluSx SINE Alu 1 311 -1 1368 214 79 66 chr20 735864 736066 -71417816 + L1M4b LINE L1 4002 4200 -2757 2229 125 0 3 chr20 736066 736378 -71417504 + AluY SINE Alu 1 311 0 1368 214 79 66 chr20 736378 736591 -71417291 + L1M4b LINE L1 4200 4428 -2529 875 225 51 63 chr20 736595 736966 -71416916 - MLT1H LTR MaLR -194 348 15 1992 115 62 42 chr20 737011 737325 -71416557 + THE1B LTR MaLR 1 325 -39 2122 108 7 0 chr20 737325 737657 -71416225 - AluSg SINE Alu 0 334 1 1992 115 62 42 chr20 737657 737698 -71416184 + THE1B LTR MaLR 325 364 0 223 238 0 32 chr20 737846 737909 -71415973 + MIR SINE MIR 161 221 -41 219 302 0 0 chr20 737957 738010 -71415872 + MIR SINE MIR 210 262 0 * 403 367 11 6 chr20 737966 738146 -71415736 - MIR SINE MIR -33 229 49 340 344 32 11 chr20 738217 738403 -71415479 + L1MC4a LINE L1 5696 5885 -1923 2303 107 7 13 chr20 738625 739040 -71414842 + AluSq SINE Alu 1 313 0 275 311 11 0 chr20 739054 739144 -71414738 - L1ME4a LINE L1 -96 6025 5935 1181 253 49 10 chr20 739146 739454 -71414428 - MLT1J LTR MaLR -181 330 11 1073 133 0 0 chr20 739564 739714 -71414168 - AluSg/x SINE Alu -23 289 140 1389 117 4 46 chr20 739714 739953 -71413929 - MER41B LTR ERV1 -277 358 130 1919 124 37 4 chr20 740394 740704 -71413178 + AluSx SINE Alu 1 319 0 4513 95 32 25 chr20 741079 741121 -71412761 + LTR8 LTR ERV1 2 42 -649 2321 84 14 7 chr20 741121 741418 -71412464 - AluSp SINE Alu -14 299 1 4513 95 32 25 chr20 741418 742060 -71411822 + LTR8 LTR ERV1 42 691 0 2319 114 3 0 chr20 742427 742724 -71411158 - AluSp SINE Alu -15 298 1 2156 144 0 10 chr20 742724 743029 -71410853 - AluJo SINE Alu -10 302 1 465 273 39 0 chr20 743211 743339 -71410543 - MIR SINE MIR -11 251 119 2996 158 74 31 chr20 743635 744093 -71409789 + MER67C LTR ERV1 1 497 -213 2187 124 14 0 chr20 744093 744384 -71409498 - AluSx SINE Alu -17 295 1 2996 158 74 31 chr20 744384 744572 -71409310 + MER67C LTR ERV1 497 675 -35 286 287 248 6 chr20 744599 744756 -71409126 + L1MC4a LINE L1 5741 5935 -1873 306 0 0 0 chr20 744824 744858 -71409024 + (TG)n Simple_repeat Simple_repeat 2 35 0 1932 155 3 10 chr20 745031 745328 -71408554 + AluSx SINE Alu 1 295 -17 1252 112 0 0 chr20 745328 745489 -71408393 + AluSg/x SINE Alu 134 294 -18 1994 138 24 14 chr20 745599 745895 -71407987 - AluSx SINE Alu -8 304 6 390 209 29 38 chr20 746458 746563 -71407319 - MIR SINE MIR -92 170 67 229 286 36 0 chr20 747906 747962 -71405920 + MIR SINE MIR 26 83 -179 728 287 63 4 chr20 749021 749258 -71404624 - MIR SINE MIR 0 262 12 289 346 76 11 chr20 750031 750216 -71403666 - MIR SINE MIR -52 210 14 1125 221 86 93 chr20 750432 751011 -71402871 + MER34C LTR ERV1 11 585 0 2064 128 14 0 chr20 751789 752085 -71401797 - AluSp SINE Alu -13 300 1 2168 75 78 8 chr20 752279 752647 -71401235 + LTR7 LTR ERV1 1 450 0 329 257 107 59 chr20 752647 753181 -71400701 + L1MC4a LINE L1 5260 6006 -1802 2241 108 3 0 chr20 753211 753506 -71400376 - AluY SINE Alu -15 296 1 703 281 31 4 chr20 753799 754027 -71399855 + MIR SINE MIR 29 262 0 218 329 162 9 chr20 754712 754928 -71398954 + L2 LINE L2 2933 3181 -91 589 233 135 10 chr20 755210 755403 -71398479 + MIR SINE MIR 32 248 -14 2339 109 0 0 chr20 755466 755770 -71398112 + AluSx SINE Alu 1 304 -8 775 228 112 94 chr20 755777 755903 -71397979 + MLT1J LTR MaLR 71 193 -318 2708 116 76 48 chr20 755903 756007 -71397875 - MER75 DNA T2_type 0 514 414 2085 123 3 7 chr20 756007 756309 -71397573 - AluSx SINE Alu -11 301 1 2708 116 76 48 chr20 756309 756704 -71397178 - MER75 DNA T2_type -100 414 1 775 228 112 94 chr20 756704 756971 -71396911 + MLT1J LTR MaLR 193 471 -40 1978 156 0 25 chr20 756989 757309 -71396573 + AluSx SINE Alu 1 312 0 209 196 0 0 chr20 758433 758479 -71395403 + T-rich Low_complexity Low_complexity 3 48 0 207 244 77 48 chr20 758499 758656 -71395226 - L2 LINE L2 0 3313 3111 447 224 105 107 chr20 758690 759067 -71394815 - L2 LINE L2 -298 3015 2616 639 224 88 43 chr20 759129 759325 -71394557 - MIR SINE MIR -32 230 30 219 264 61 74 chr20 759779 759927 -71393955 + L2 LINE L2 3077 3222 -91 241 277 8 46 chr20 760330 760460 -71393422 + GA-rich Low_complexity Low_complexity 2 126 0 248 284 12 25 chr20 760606 760687 -71393195 - MIR3 SINE MIR -37 171 92 287 296 0 0 chr20 760736 760807 -71393075 + MIR SINE MIR 73 143 -119 1926 155 3 19 chr20 761119 761429 -71392453 - AluJb SINE Alu -6 306 2 234 218 18 0 chr20 762174 762229 -71391653 + MIR SINE MIR 115 170 -92 611 279 53 0 chr20 762239 762429 -71391453 - MIR SINE MIR -2 260 61 2061 165 93 89 chr20 762463 762804 -71391078 - LTR8A LTR ERV1 0 727 381 2238 113 0 0 chr20 762804 763096 -71390786 + AluSx SINE Alu 1 292 -20 234 29 29 0 chr20 763096 763130 -71390752 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 2061 165 93 89 chr20 763130 763326 -71390556 - LTR8A LTR ERV1 -346 381 187 201 333 0 0 chr20 763396 763453 -71390429 + MIR SINE MIR 200 256 -6 1216 221 129 52 chr20 763621 763860 -71390022 + MER34C LTR ERV1 1 220 -365 2031 109 3 3 chr20 763860 764154 -71389728 - AluSq SINE Alu -8 305 12 1216 221 129 52 chr20 764154 764457 -71389425 + MER34C LTR ERV1 220 585 0 379 111 32 0 chr20 764479 764542 -71389340 + LTR24B LTR ERV1 8 72 -504 782 188 78 0 chr20 764575 764729 -71389153 - FRAM SINE Alu 0 166 1 1308 52 6 0 chr20 764731 764903 -71388979 + LTR19-int LTR ERV1 2085 2257 -3329 301 233 186 0 chr20 764903 764989 -71388893 - LTR8 LTR ERV1 -434 257 156 3137 53 30 30 chr20 764989 765190 -71388692 + LTR19-int LTR ERV1 2346 2546 -3040 2007 105 14 3 chr20 765190 765486 -71388396 + AluSq SINE Alu 1 299 -14 3137 53 30 30 chr20 765486 765720 -71388162 + LTR19-int LTR ERV1 2545 2781 -2805 * 10991 52 40 13 chr20 765718 766211 -71387671 - LTR19-int LTR ERV1 -1329 4257 3779 2209 91 3 10 chr20 766211 766519 -71387363 + AluSp SINE Alu 1 306 -7 10991 52 40 13 chr20 766519 767146 -71386736 - LTR19-int LTR ERV1 -1807 3779 3085 2095 96 7 7 chr20 767146 767439 -71386443 - AluY SINE Alu -18 293 1 10991 52 40 13 chr20 767439 767778 -71386104 - LTR19-int LTR ERV1 -2501 3085 2757 2036 107 4 0 chr20 767812 768093 -71385789 + AluSq SINE Alu 1 282 -31 8914 78 27 16 chr20 768102 768458 -71385424 + LTR19A-int LTR ERV1 4380 4731 -855 2106 121 3 7 chr20 768458 768765 -71385117 + AluSx SINE Alu 1 306 -6 8914 78 27 16 chr20 768765 769602 -71384280 + LTR19A-int LTR ERV1 4731 5586 0 3571 86 15 0 chr20 769602 770081 -71383801 + LTR19A LTR ERV1 1 486 0 3571 137 7 6 chr20 770102 770648 -71383234 - LTR10A LTR ERV1 -62 547 1 6843 182 23 21 chr20 770693 773089 -71380793 - LTR10A-int LTR ERV1 0 6649 4190 2161 69 0 0 chr20 773090 773364 -71380518 - AluSg SINE Alu -4 306 33 810 63 18 0 chr20 773364 773475 -71380407 - AluY SINE Alu -14 297 185 2430 253 54 12 chr20 773479 774073 -71379809 - HERVI LTR ERV1 -2456 5329 4711 * 5025 80 27 0 chr20 774040 774778 -71379104 - HERVI LTR ERV1 -4320 2576 1819 393 216 159 0 chr20 774783 774871 -71379011 + LTR8 LTR ERV1 156 257 -434 567 54 0 0 chr20 774871 774945 -71378937 - Harlequin LTR ERV1 -5178 1718 1645 * 1991 153 3 0 chr20 774944 775244 -71378638 - Harlequin LTR ERV1 -3205 4580 4280 249 204 102 46 chr20 775293 775401 -71378481 + LTR24B LTR ERV1 260 373 -203 2418 135 70 0 chr20 775401 775786 -71378096 - MER84 LTR ERVI 0 507 96 4953 99 34 57 chr20 775786 776583 -71377299 - MER4E LTR ERV1 0 779 1 1130 103 130 5 chr20 776583 776758 -71377124 + MER41B LTR ERV1 434 634 -1 513 66 66 13 chr20 776763 776839 -71377043 - MER84 LTR ERVI -427 80 1 1360 93 15 34 chr20 776896 777100 -71376782 + MER84 LTR ERVI 1 200 -307 1256 140 53 5 chr20 777101 777308 -71376574 + MER4E LTR ERV1 249 465 -314 817 106 0 0 chr20 777365 777469 -71376413 + MER84-int LTR ERV1 2030 2133 -2821 999 185 11 11 chr20 777469 777647 -71376235 + LTR1 LTR ERV1 1 178 -607 1823 167 149 46 chr20 777648 778145 -71375737 + LTR10A LTR ERV1 1 548 -61 772 226 88 33 chr20 778154 778428 -71375454 + LTR10A-int LTR ERV1 1 289 -6360 18573 219 11 28 chr20 778490 785002 -71368880 + LTR10A-int LTR ERV1 501 5708 -941 2250 74 0 35 chr20 785002 785312 -71368570 + AluY SINE Alu 1 299 -12 18573 219 11 28 chr20 785312 786239 -71367643 + LTR10A-int LTR ERV1 5708 6649 0 1850 188 77 70 chr20 786239 786783 -71367099 + LTR10A LTR ERV1 1 548 -61 371 127 0 0 chr20 786796 786851 -71367031 + LTR1 LTR ERV1 176 230 -555 764 170 17 21 chr20 786941 787236 -71366646 + LTR1B LTR ERV1 401 826 0 3961 124 23 20 chr20 787237 787420 -71366462 + MER4A-int LTR ERV1 2131 2312 -2642 1897 120 3 11 chr20 787420 787755 -71366127 + AluSx SINE Alu 1 333 0 3961 124 23 20 chr20 787755 788174 -71365708 + MER4A-int LTR ERV1 2312 2736 -2218 2159 112 0 0 chr20 788174 788470 -71365412 + AluSq SINE Alu 1 296 -17 17067 137 99 79 chr20 788579 789162 -71364720 + MER4A-int LTR ERV1 189 759 -5839 4668 122 19 59 chr20 789162 789451 -71364431 - MER4E LTR ERV1 0 779 480 1844 134 0 7 chr20 789451 789762 -71364120 - AluSx SINE Alu 0 309 1 4668 122 19 59 chr20 789762 790282 -71363600 - MER4E LTR ERV1 -299 480 2 17067 137 99 79 chr20 790282 790490 -71363392 + MER4A-int LTR ERV1 759 961 -5637 1201 170 14 0 chr20 790490 790702 -71363180 - AluSg/x SINE Alu -13 299 85 17067 137 99 79 chr20 790702 793078 -71360804 + MER4A-int LTR ERV1 961 3288 -3310 1997 120 3 0 chr20 793078 793384 -71360498 - AluSx SINE Alu 0 307 1 17067 137 99 79 chr20 793384 793402 -71360480 + MER4A-int LTR ERV1 3288 3304 -3294 2000 116 0 52 chr20 793402 793730 -71360152 - AluSx SINE Alu -1 311 1 17067 137 99 79 chr20 793730 794389 -71359493 + MER4A-int LTR ERV1 3304 3948 -2650 189 0 0 0 chr20 794389 794410 -71359472 + (TTA)n Simple_repeat Simple_repeat 1 21 0 17067 137 99 79 chr20 794410 795666 -71358216 + MER4A-int LTR ERV1 3948 6598 0 3154 130 121 47 chr20 795667 796286 -71357596 + MER4A LTR ERV1 1 465 0 2368 138 0 22 chr20 796286 796585 -71357297 + MER84 LTR ERVI 146 437 -70 2158 125 3 0 chr20 796585 796890 -71356992 - AluSq SINE Alu -6 307 2 2368 138 0 22 chr20 796890 796960 -71356922 + MER84 LTR ERVI 437 507 0 181 238 0 0 chr20 797128 797170 -71356712 - L3b LINE CR1 -198 1385 1344 212 145 0 48 chr20 797211 797246 -71356636 + (TTTAA)n Simple_repeat Simple_repeat 1 33 -26 2115 116 0 0 chr20 797246 797540 -71356342 - AluSq SINE Alu -19 294 1 212 145 0 48 chr20 797540 797566 -71356316 + (TTTAA)n Simple_repeat Simple_repeat 33 59 0 3784 177 39 58 chr20 797698 798671 -71355211 - LTR5 LTR ERVK -14 955 1 2090 132 3 0 chr20 798683 798994 -71354888 - AluSx SINE Alu 0 312 1 4032 134 3 23 chr20 799050 799698 -71354184 + MER41B LTR ERV1 1 635 0 231 369 18 18 chr20 799740 799851 -71354031 + L2 LINE L2 2941 3051 -221 2268 106 0 0 chr20 799992 800304 -71353578 - AluSp SINE Alu -1 312 1 1551 182 0 24 chr20 800356 800678 -71353204 - AluSx SINE Alu 0 315 1 636 232 55 76 chr20 800840 801129 -71352753 - L2 LINE L2 0 3313 3031 249 264 98 52 chr20 801276 801368 -71352514 - L1MC/D LINE L1 -2003 5805 5719 1903 125 14 0 chr20 801368 801665 -71352217 + AluSx SINE Alu 1 301 -11 249 264 98 52 chr20 801665 801746 -71352136 - L1MC/D LINE L1 -2089 5719 5624 287 218 117 5 chr20 802386 802495 -71351387 + AluJ/monomer SINE Alu 1 51 -251 324 48 0 0 chr20 802574 802616 -71351266 + (TG)n Simple_repeat Simple_repeat 1 42 0 1814 84 0 0 chr20 802616 802854 -71351028 - AluSg SINE Alu -33 277 40 1722 82 0 41 chr20 803050 803295 -71350587 - AluSq SINE Alu -78 235 1 222 86 0 0 chr20 803387 803417 -71350465 + (A)n Simple_repeat Simple_repeat 1 31 0 2121 123 0 0 chr20 803417 803727 -71350155 + AluSg SINE Alu 1 310 0 457 340 39 0 chr20 803748 803904 -71349978 + L3 LINE CR1 967 1128 -449 2169 60 39 0 chr20 804339 804623 -71349259 - AluSp SINE Alu -14 299 5 1894 55 65 31 chr20 804640 804932 -71348950 - AluY SINE Alu -9 302 1 742 190 17 0 chr20 805089 805263 -71348619 + CT-rich Low_complexity Low_complexity 4 180 0 1899 76 8 4 chr20 805268 805519 -71348363 - AluSx SINE Alu -23 289 38 187 228 139 0 chr20 805576 805677 -71348205 - L2 LINE L2 -814 2500 2386 619 138 36 7 chr20 806285 806423 -71347459 + CT-rich Low_complexity Low_complexity 3 144 0 1839 164 3 3 chr20 806425 806737 -71347145 - AluJb SINE Alu 0 312 1 334 267 176 6 chr20 806771 806947 -71346935 - L1MC4 LINE L1 -8 8034 7829 330 272 215 21 chr20 807030 807309 -71346573 + MER113 DNA MER1_type? 126 458 -63 685 303 56 19 chr20 807641 807908 -71345974 + L2 LINE L2 2994 3270 -2 2449 65 0 7 chr20 808004 808311 -71345571 - AluSq SINE Alu -8 305 1 532 266 89 87 chr20 808311 808750 -71345132 - L2 LINE L2 -3 3269 2830 220 279 25 0 chr20 809492 809571 -71344311 + MIR SINE MIR 67 147 -61 549 237 18 18 chr20 809626 809795 -71344087 + MER113 DNA MER1_type? 81 249 -272 1041 212 108 7 chr20 809798 810067 -71343815 + L1ME1 LINE L1 5871 6166 0 2083 115 10 10 chr20 810150 810462 -71343420 + AluSx SINE Alu 1 312 0 825 233 11 5 chr20 810513 810713 -71343169 + MLT1A2 LTR MaLR 188 389 -1 2042 132 0 19 chr20 811121 811432 -71342450 - AluSx SINE Alu -7 305 1 398 241 28 0 chr20 811483 811591 -71342291 + MER103 DNA DNA 2 112 -54 619 256 38 76 chr20 811734 811972 -71341910 - L2 LINE L2 -250 3063 2835 294 264 11 44 chr20 812151 812179 -71341703 - MIR SINE MIR -80 182 155 2271 120 22 27 chr20 812179 812545 -71341337 + THE1B LTR MaLR 1 364 0 294 264 11 44 chr20 812545 812607 -71341275 - MIR SINE MIR -107 155 95 225 98 0 73 chr20 812688 812729 -71341153 - MER5B DNA MER1_type -3 175 138 1002 208 162 8 chr20 812729 813051 -71340831 + MLT1F LTR MaLR 2 415 -127 1463 125 30 106 chr20 813155 813484 -71340398 + AluYb8 SINE Alu 1 304 -14 2324 81 37 0 chr20 813633 813930 -71339952 + AluSp SINE Alu 1 308 -5 1744 171 27 10 chr20 813939 814237 -71339645 + AluJb SINE Alu 1 303 -9 2363 107 0 0 chr20 814433 814733 -71339149 - AluSq SINE Alu -13 300 1 1644 227 117 24 chr20 815591 816053 -71337829 + MER69 DNA AcHobo 77 581 -645 328 191 55 22 chr20 816035 816113 -71337769 + MER69 DNA AcHobo 2279 2353 -173 * 1868 135 3 45 chr20 816113 816288 -71337594 - AluJo SINE Alu -3 309 151 2183 138 6 3 chr20 816288 816599 -71337283 - AluSx SINE Alu 0 312 1 1868 135 3 45 chr20 816599 816735 -71337147 - AluJo SINE Alu -161 151 11 328 191 55 22 chr20 816735 816824 -71337058 + MER69 DNA AcHobo 2353 2482 -44 2427 103 3 3 chr20 816825 817136 -71336746 + AluSq SINE Alu 1 311 -2 338 314 20 0 chr20 817296 817398 -71336484 + MIR SINE MIR 118 221 -41 1383 182 121 4 chr20 817907 818171 -71335711 + AluJo SINE Alu 5 299 -13 2037 131 28 0 chr20 818228 818518 -71335364 - AluSx SINE Alu -12 300 3 2065 161 3 0 chr20 818576 818887 -71334995 + AluJo SINE Alu 1 312 0 356 242 167 0 chr20 819023 819155 -71334727 - L1ME LINE L1 -347 5774 5621 253 279 0 0 chr20 819202 819270 -71334612 - MIR SINE MIR -92 116 49 245 119 24 0 chr20 819898 819940 -71333942 - MIR SINE MIR -64 144 102 255 325 75 8 chr20 820484 820604 -71333278 - MIR SINE MIR -101 161 34 252 147 250 0 chr20 820863 820931 -71332951 + MER96B DNA MER1_type? 1 85 -332 333 0 0 0 chr20 821015 821052 -71332830 + (TC)n Simple_repeat Simple_repeat 2 38 0 230 217 0 61 chr20 821052 821167 -71332715 - L1MC4 LINE L1 -1339 6703 6596 196 241 19 0 chr20 821168 821222 -71332660 + MIR SINE MIR 65 119 -89 657 231 136 36 chr20 821875 822096 -71331786 - MIR SINE MIR 0 262 20 3603 125 23 33 chr20 822130 822884 -71330998 - L1MB3 LINE L1 -15 6168 5333 2296 98 3 7 chr20 822893 823200 -71330682 - AluSg1 SINE Alu -3 306 1 476 293 75 0 chr20 823385 823518 -71330364 - MIR SINE MIR -97 165 23 183 300 0 0 chr20 823532 823592 -71330290 - L2 LINE L2 -280 2992 2933 874 219 25 15 chr20 823771 823899 -71329983 + L1MC4 LINE L1 7282 7414 -628 749 204 59 0 chr20 823899 824051 -71329831 + FRAM SINE Alu 4 164 -2 874 219 25 15 chr20 824051 824123 -71329759 + L1MC4 LINE L1 7414 7484 -558 239 79 26 0 chr20 824129 824167 -71329715 + (TTTC)n Simple_repeat Simple_repeat 3 41 0 522 249 175 46 chr20 824317 824667 -71329215 - L2 LINE L2 -107 3165 2776 583 95 0 0 chr20 824668 824752 -71329130 - AluY SINE Alu -10 301 218 235 194 14 68 chr20 824833 824907 -71328975 - MIR SINE MIR -61 147 89 982 175 26 5 chr20 825038 825232 -71328650 + MIR SINE MIR 46 243 -19 503 195 27 47 chr20 826643 826792 -71327090 + MIR SINE MIR 85 230 -32 297 274 20 10 chr20 827954 828056 -71325826 - MIR SINE MIR -98 164 62 21 0 0 0 chr20 828058 828079 -71325803 + GC_rich Low_complexity Low_complexity 1 21 0 324 218 40 142 chr20 828743 828968 -71324914 - L2 LINE L2 -5 3308 3107 235 202 108 0 chr20 829022 829088 -71324794 + MIR SINE MIR 72 144 -64 896 207 5 19 chr20 829197 829405 -71324477 + MER3 DNA MER1_type 5 209 0 365 264 11 0 chr20 830109 830200 -71323682 + MIR SINE MIR 69 160 -102 203 160 13 80 chr20 831122 831197 -71322685 + (CCCCG)n Simple_repeat Simple_repeat 3 72 0 221 200 150 80 chr20 833817 833917 -71319965 - L2 LINE L2 -61 3252 3146 2219 125 0 0 chr20 834827 835124 -71318758 + AluSx SINE Alu 1 297 -15 591 136 0 59 chr20 835154 835272 -71318610 + L1PA10 LINE L1 6058 6168 0 341 268 79 8 chr20 835318 835451 -71318431 - L1MC4 LINE L1 -1 8041 7783 553 258 50 13 chr20 835598 835757 -71318125 - L1ME2 LINE L1 -13 6151 5987 537 152 62 41 chr20 835797 835942 -71317940 - HAL1 LINE L1 -71 2436 2289 375 23 0 0 chr20 835942 835986 -71317896 + (CA)n Simple_repeat Simple_repeat 1 44 0 2224 128 0 0 chr20 835992 836288 -71317594 - AluSx SINE Alu -16 296 1 777 265 50 14 chr20 836328 836547 -71317335 + MIR SINE MIR 18 244 -18 539 228 21 26 chr20 836617 836806 -71317076 - HAL1 LINE L1 -327 2180 1993 267 276 92 20 chr20 836950 837048 -71316834 - L2 LINE L2 -12 3301 3197 712 268 104 0 chr20 837385 837605 -71316277 - MIR SINE MIR -19 243 1 251 276 0 40 chr20 837720 837796 -71316086 - L2 LINE L2 0 3272 3200 195 42 0 0 chr20 837903 837927 -71315955 + (TG)n Simple_repeat Simple_repeat 1 24 0 485 273 166 49 chr20 838047 838457 -71315425 - MLT1H LTR MaLR 0 549 92 2064 108 4 0 chr20 838504 838773 -71315109 - AluSg SINE Alu -40 270 1 257 275 14 0 chr20 838788 838857 -71315025 - MLT1H LTR MaLR -476 73 4 283 305 86 31 chr20 838896 839024 -71314858 + MIR3 SINE MIR 34 168 -40 554 308 106 46 chr20 839058 839425 -71314457 - L2 LINE L2 -11 3261 2873 920 257 94 37 chr20 839501 840020 -71313862 + L2 LINE L2 2763 3313 0 187 229 0 0 chr20 840060 840095 -71313787 + MIR SINE MIR 33 67 -141 217 273 30 0 chr20 840577 840643 -71313239 - MIR SINE MIR -66 142 75 321 47 0 0 chr20 840691 840734 -71313148 + (TG)n Simple_repeat Simple_repeat 1 43 0 299 197 84 14 chr20 840794 840865 -71313017 + MIR SINE MIR 12 87 -175 2178 112 3 0 chr20 840988 841275 -71312607 + AluSg SINE Alu 1 288 -22 290 336 121 27 chr20 841824 842047 -71311835 + L1MC4a LINE L1 5690 5933 -1875 720 179 163 5 chr20 842671 842861 -71311021 - L2 LINE L2 0 3313 3094 1918 238 74 24 chr20 842881 843423 -71310459 - L1ME1 LINE L1 -1 6165 5597 882 249 128 46 chr20 843442 843704 -71310178 - L2 LINE L2 -244 3069 2830 1910 143 28 0 chr20 843704 843990 -71309892 - AluSx SINE Alu -18 294 1 882 249 128 46 chr20 843990 844295 -71309587 - L2 LINE L2 -483 2830 2456 1451 209 27 3 chr20 844304 844605 -71309277 + MLT1E3 LTR MaLR 316 623 -1 385 267 9 0 chr20 844613 844718 -71309164 - MIR3 SINE MIR -6 202 97 394 309 112 0 chr20 845026 845178 -71308704 + MIR SINE MIR 46 214 -48 190 261 54 33 chr20 845209 845301 -71308581 + MIR3 SINE MIR 104 197 -11 606 221 0 8 chr20 845301 845423 -71308459 + MIR SINE MIR 50 170 -92 265 188 206 31 chr20 846310 846407 -71307475 + MIR SINE MIR 4 116 -92 254 325 0 0 chr20 846438 846515 -71307367 - MIR SINE MIR -72 136 60 293 244 35 12 chr20 846706 846792 -71307090 - MIR SINE MIR -76 132 45 641 221 10 72 chr20 846998 847193 -71306689 - MIR SINE MIR -3 259 77 412 310 25 19 chr20 847528 847686 -71306196 + MIR SINE MIR 2 160 -102 623 278 83 81 chr20 847689 848099 -71305783 + MLT1J LTR MaLR 9 419 -92 2676 147 47 81 chr20 848114 848232 -71305650 - L1MC3 LINE L1 0 7785 7665 1752 168 9 32 chr20 848232 848547 -71305335 + AluJo SINE Alu 1 308 -4 2676 147 47 81 chr20 848547 849047 -71304835 - L1MC3 LINE L1 -120 7665 7188 290 247 78 0 chr20 849049 849126 -71304756 - MLT1F1 LTR MaLR -440 127 45 2021 160 0 0 chr20 849367 849660 -71304222 + AluJb SINE Alu 1 293 -19 35 41 0 0 chr20 849665 849714 -71304168 + AT_rich Low_complexity Low_complexity 1 49 0 2529 211 30 13 chr20 849827 850430 -71303452 - MER90 LTR ERV1 -1 613 1 204 125 83 0 chr20 850735 850783 -71303099 - MIR3 SINE MIR -53 155 104 283 211 53 13 chr20 851300 851376 -71302506 + MIR SINE MIR 65 143 -119 280 238 38 0 chr20 851431 851511 -71302371 - MLT1L LTR MaLR 0 615 533 2242 141 0 0 chr20 851698 852010 -71301872 - AluSx SINE Alu 0 312 1 258 257 57 0 chr20 852809 852879 -71301003 - MIR SINE MIR 0 262 189 880 205 118 0 chr20 853014 853243 -71300639 + Charlie4a DNA MER1_type 100 355 -153 426 39 0 0 chr20 853269 853321 -71300561 + (TG)n Simple_repeat Simple_repeat 1 52 0 526 186 0 0 chr20 853321 853407 -71300475 - FLAM_A SINE Alu -30 112 27 2435 62 0 10 chr20 853442 853732 -71300150 - AluY SINE Alu -24 287 1 627 154 15 44 chr20 853733 853869 -71300013 + Charlie4a DNA MER1_type 363 494 -14 411 221 66 41 chr20 853872 853994 -71299888 - MIR SINE MIR -68 194 70 181 300 0 0 chr20 854740 854790 -71299092 + MIR SINE MIR 81 130 -78 2112 142 3 3 chr20 854795 855105 -71298777 - AluSx SINE Alu 0 312 3 913 306 146 3 chr20 855640 856003 -71297879 + MLT1K LTR MaLR 108 522 -66 2191 121 7 0 chr20 856097 856394 -71297488 + AluSx SINE Alu 1 299 -13 554 279 73 45 chr20 856679 856926 -71296956 - MIR SINE MIR -7 255 2 449 252 15 15 chr20 857916 858047 -71295835 - MER103 DNA DNA -12 154 24 201 111 56 0 chr20 859097 859133 -71294749 + G-rich Low_complexity Low_complexity 4 41 0 236 311 13 20 chr20 859321 859472 -71294410 + (TCTCTG)n Simple_repeat Simple_repeat 2 151 0 214 133 0 133 chr20 859617 859700 -71294182 + (TCTCTG)n Simple_repeat Simple_repeat 3 74 0 1870 167 3 23 chr20 860570 860869 -71293013 - AluJb SINE Alu -18 294 2 430 265 124 49 chr20 860916 861101 -71292781 - MIR SINE MIR -44 218 20 599 276 55 55 chr20 861316 861570 -71292312 + MIR SINE MIR 9 262 0 2087 122 3 50 chr20 861698 862019 -71291863 + AluJb SINE Alu 1 306 -6 561 286 93 6 chr20 862361 862543 -71291339 - MIR SINE MIR -14 248 51 1399 142 0 43 chr20 862701 862912 -71290970 + AluJb SINE Alu 87 288 -24 236 305 183 0 chr20 863042 863173 -71290709 + L3 LINE CR1 1419 1573 -4 557 227 188 0 chr20 863280 863456 -71290426 + MIR SINE MIR 48 256 -6 283 369 38 19 chr20 863510 863670 -71290212 - MIR3 SINE MIR -35 173 11 754 240 104 5 chr20 864410 864631 -71289251 + L1ME3 LINE L1 5918 6160 -2 29 70 0 0 chr20 865325 865382 -71288500 + AT_rich Low_complexity Low_complexity 1 57 0 196 216 98 0 chr20 865883 865934 -71287948 + MIR SINE MIR 92 147 -115 389 167 313 0 chr20 865940 866036 -71287846 + MIR SINE MIR 103 228 -34 1787 140 4 11 chr20 866178 866449 -71287433 + AluJo SINE Alu 25 293 -19 769 284 53 25 chr20 866484 866769 -71287113 + MLT1J1 LTR MaLR 153 445 -1 548 271 40 0 chr20 867270 867421 -71286461 - L2 LINE L2 -222 3050 2894 215 342 17 0 chr20 867646 867763 -71286119 - L2 LINE L2 -613 2701 2583 342 185 37 0 chr20 867775 867856 -71286026 - MIR SINE MIR -60 148 65 180 179 0 0 chr20 868637 868676 -71285206 + (CAA)n Simple_repeat Simple_repeat 3 41 0 652 254 42 69 chr20 868867 869084 -71284798 - MIR SINE MIR -32 230 20 532 220 42 8 chr20 870203 870321 -71283561 + L2 LINE L2 3149 3270 -2 250 240 10 94 chr20 870496 870592 -71283290 - MIR3 SINE MIR -30 178 91 237 259 0 12 chr20 870674 870755 -71283127 - MIR SINE MIR -75 133 54 624 294 60 27 chr20 872017 872346 -71281536 + L1MC4a LINE L1 5612 5956 -1852 2080 173 3 0 chr20 872346 872711 -71281171 - MER47A DNA MER2_type 0 366 1 624 294 60 27 chr20 872711 872748 -71281134 + L1MC4a LINE L1 5956 5990 -1818 561 221 8 8 chr20 872758 872880 -71281002 + L2 LINE L2 3192 3313 0 21 36 0 0 chr20 873487 873515 -71280367 + AT_rich Low_complexity Low_complexity 1 28 0 273 125 0 0 chr20 873667 873715 -71280167 + L1MB8 LINE L1 6129 6176 -2 247 64 21 43 chr20 873730 873777 -71280105 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 210 352 9 37 chr20 873862 873970 -71279912 + (CCCCAG)n Simple_repeat Simple_repeat 2 106 0 392 307 6 24 chr20 873980 874146 -71279736 + (CCCTAG)n Simple_repeat Simple_repeat 2 164 0 835 249 194 31 chr20 874457 875110 -71278772 + L2 LINE L2 2378 3178 -135 1756 198 21 0 chr20 875110 875449 -71278433 - MER7A DNA MER2_type 0 346 3 835 249 194 31 chr20 875449 875566 -71278316 + L2 LINE L2 3178 3275 -38 184 233 107 107 chr20 875729 875832 -71278050 + L2 LINE L2 3172 3274 -39 * 201 349 72 46 chr20 875809 876004 -71277878 - L2 LINE L2 -39 3233 3034 698 263 86 74 chr20 876344 876763 -71277119 + L2 LINE L2 2579 2991 -322 643 276 28 37 chr20 876766 876983 -71276899 + L2 LINE L2 3099 3313 0 265 265 36 24 chr20 877136 877219 -71276663 + MIR3 SINE MIR 119 202 -6 576 225 95 12 chr20 877695 877864 -71276018 + MER5A DNA MER1_type 3 185 -4 2107 138 3 0 chr20 878164 878460 -71275422 + AluJb SINE Alu 1 297 -15 680 168 61 0 chr20 878551 878682 -71275200 - FRAM SINE Alu -38 138 1 241 281 245 0 chr20 878747 878943 -71274939 + L2 LINE L2 1940 2183 -1131 967 228 109 16 chr20 878943 879351 -71274531 + Charlie4a DNA MER1_type 1 476 -32 353 294 112 61 chr20 879442 879738 -71274144 + L2 LINE L2 2244 2554 -760 2407 52 28 31 chr20 879841 880168 -71273714 - LTR17 LTR ERV1 -454 326 1 1607 71 5 0 chr20 880170 880381 -71273501 - HERV17 LTR ERV1 -3 8623 8412 220 186 129 43 chr20 880579 880649 -71273233 - MIR3 SINE MIR -47 161 86 243 310 23 0 chr20 881228 881315 -71272567 + MIR SINE MIR 47 135 -127 1422 253 75 10 chr20 881518 881917 -71271965 + L1ME1 LINE L1 5740 6164 -2 738 309 163 3 chr20 882025 882388 -71271494 - L2 LINE L2 -5 3308 2888 351 247 93 16 chr20 882492 882651 -71271231 + MIR SINE MIR 17 185 -62 1605 120 110 6 chr20 882727 883080 -71270802 + LTR7 LTR ERV1 1 450 0 1114 211 14 12 chr20 883080 883488 -71270394 + HERVH LTR ERV1 1 446 -7267 8945 141 10 39 chr20 883575 885102 -71268780 + HERVH LTR ERV1 808 2288 -5425 2435 66 0 20 chr20 885102 885403 -71268479 - AluY SINE Alu -16 295 1 8945 141 10 39 chr20 885403 885482 -71268400 + HERVH LTR ERV1 2288 2368 -5345 2064 119 0 12 chr20 885482 885809 -71268073 + HERVH LTR ERV1 2697 3019 -4694 1220 128 0 0 chr20 885798 885993 -71267889 + HERVH LTR ERV1 4335 4529 -3184 * 3289 88 7 0 chr20 885993 886450 -71267432 + HERVH LTR ERV1 6489 6948 -765 3330 107 5 59 chr20 886504 887076 -71266806 + HERVH LTR ERV1 7173 7713 0 2027 102 47 6 chr20 887076 887450 -71266432 + LTR7 LTR ERV1 1 450 0 1807 179 10 7 chr20 887481 887789 -71266093 + AluJb SINE Alu 1 309 -3 1638 254 37 22 chr20 888146 888634 -71265248 + Charlie4a DNA MER1_type 14 508 0 180 298 0 0 chr20 888668 888715 -71265167 + L2 LINE L2 3145 3191 -81 234 273 83 19 chr20 888744 888863 -71265019 - MIR SINE MIR -69 139 38 683 287 93 20 chr20 889105 889460 -71264422 + L2 LINE L2 2410 2790 -524 297 264 73 27 chr20 889756 889866 -71264016 - MIR3 SINE MIR -32 176 62 525 354 29 26 chr20 890182 890473 -71263409 - L1MC4a LINE L1 -1910 5898 5604 1686 144 0 36 chr20 890473 890750 -71263132 - AluJo SINE Alu -8 304 38 525 354 29 26 chr20 890750 890803 -71263079 - L1MC4a LINE L1 -2204 5604 5553 647 295 118 14 chr20 890945 891233 -71262649 + L2 LINE L2 2996 3313 0 211 283 120 0 chr20 891553 891645 -71262237 - L2 LINE L2 -1 3312 3210 510 276 205 0 chr20 891681 891866 -71262016 - MIR SINE MIR -27 235 13 2037 223 61 21 chr20 891878 892399 -71261483 + MLT1F LTR MaLR 1 542 0 251 185 148 56 chr20 892975 893083 -71260799 + L2 LINE L2 3188 3305 -8 546 229 127 13 chr20 893389 893546 -71260336 - MIR SINE MIR -9 253 79 525 358 63 36 chr20 894104 894551 -71259331 + L2 LINE L2 2812 3270 -2 312 305 29 0 chr20 894761 894866 -71259016 + MIR SINE MIR 33 140 -68 636 256 128 0 chr20 894889 895092 -71258790 + MIR SINE MIR 9 237 -25 320 276 114 0 chr20 895206 895311 -71258571 - MIR SINE MIR -72 190 74 811 316 9 0 chr20 895409 895637 -71258245 - MIR SINE MIR -11 251 22 769 254 94 5 chr20 895954 896167 -71257715 + MIR SINE MIR 19 250 -12 200 250 18 45 chr20 897407 897519 -71256363 + (CAGAGA)n Simple_repeat Simple_repeat 3 111 0 849 194 0 0 chr20 897525 897664 -71256218 + FRAM SINE Alu 7 145 -31 504 156 0 0 chr20 897668 897777 -71256105 + GA-rich Low_complexity Low_complexity 1 109 0 361 267 33 8 chr20 898445 898565 -71255317 + GA-rich Low_complexity Low_complexity 5 127 0 281 210 48 97 chr20 898731 898855 -71255027 + MIR3 SINE MIR 37 154 -54 201 121 0 0 chr20 898976 899009 -71254873 + (ATG)n Simple_repeat Simple_repeat 1 33 0 660 304 113 12 chr20 899948 900274 -71253608 - L2 LINE L2 0 3313 2955 215 297 115 11 chr20 900273 900455 -71253427 - L2 LINE L2 -526 2788 2588 * 860 283 121 42 chr20 900756 901552 -71252330 + L2 LINE L2 2437 3312 -1 255 239 0 0 chr20 902450 902538 -71251344 + (CA)n Simple_repeat Simple_repeat 1 88 0 209 373 32 0 chr20 903031 903157 -71250725 + MIR SINE MIR 16 145 -63 757 209 158 0 chr20 903225 903402 -71250480 + MIR SINE MIR 48 252 -10 682 252 7 0 chr20 904002 904149 -71249733 + MER45A DNA AcHobo 31 178 0 407 332 146 5 chr20 904270 904475 -71249407 + MIR SINE MIR 28 261 -1 1728 196 25 3 chr20 904485 904842 -71249040 + MLT1A1 LTR MaLR 1 365 0 300 111 0 0 chr20 904949 904994 -71248888 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 2127 143 7 0 chr20 904999 905306 -71248576 - AluSx SINE Alu -3 309 1 211 288 157 65 chr20 905306 905459 -71248423 + L2 LINE L2 2687 2853 -461 1016 298 99 47 chr20 906080 906574 -71247308 - MLT1K LTR MaLR -45 543 24 278 144 45 117 chr20 906641 906752 -71247130 - MIR3 SINE MIR -21 187 85 219 149 0 0 chr20 907419 907459 -71246423 + MIR SINE MIR 115 153 -109 1365 262 139 43 chr20 907490 907993 -71245889 - MLT1G1 LTR MaLR -2 593 32 2104 130 0 0 chr20 907993 908327 -71245555 - AluSx SINE Alu 0 334 1 1365 262 139 43 chr20 908327 908361 -71245521 - MLT1G1 LTR MaLR -563 32 3 391 292 25 40 chr20 908983 909185 -71244697 - L1ME4a LINE L1 -1 6120 5922 888 118 0 0 chr20 909281 909408 -71244474 + FLAM_C SINE Alu 2 128 -5 2143 133 3 0 chr20 909445 909745 -71244137 + AluSx SINE Alu 1 301 -11 285 318 76 47 chr20 910070 910598 -71243284 - L1ME4a LINE L1 -202 5919 5379 1053 216 206 64 chr20 910612 911093 -71242789 + MLT1H LTR MaLR 1 549 0 399 275 107 0 chr20 911109 911240 -71242642 + MIR SINE MIR 59 203 -59 1911 145 22 19 chr20 911489 911800 -71242082 + AluSx SINE Alu 1 312 0 2905 195 20 4 chr20 911801 912339 -71241543 - MER41D LTR ERV1 -10 547 1 338 167 33 89 chr20 912342 912432 -71241450 - MER41D-int LTR ERV1 -10 7195 7111 2726 294 29 23 chr20 912572 913346 -71240536 - MER41D-int LTR ERV1 -260 7496 6714 5112 98 17 22 chr20 913346 914129 -71239753 - MER4E LTR ERV1 0 779 1 2726 294 29 23 chr20 914129 914278 -71239604 - MER41D-int LTR ERV1 -1042 6714 6567 971 283 16 35 chr20 914394 914761 -71239121 - MER41D-int LTR ERV1 -1401 6355 5996 607 124 72 0 chr20 914765 914862 -71239020 - MER49 LTR ERV1 -204 719 616 * 1048 190 27 81 chr20 914855 915150 -71238732 - MER49 LTR ERV1 -642 281 3 * 1584 156 36 22 chr20 915150 915523 -71238359 - MER41D-int LTR ERV1 -35 6723 6363 507 179 219 0 chr20 915512 915635 -71238247 - MER41D-int LTR ERV1 -625 6133 5984 * 735 159 0 138 chr20 915841 915955 -71237927 - MER41D-int LTR ERV1 -4167 3953 3875 1978 162 0 14 chr20 915955 916252 -71237630 - AluSx SINE Alu -18 294 2 735 159 0 138 chr20 916252 916332 -71237550 - MER41D-int LTR ERV1 -4245 3875 3786 2656 155 51 88 chr20 916514 917784 -71236098 - MER41D-int LTR ERV1 -2148 4183 1720 800 162 8 1 chr20 918282 918424 -71235458 - MER41D-int LTR ERV1 -3015 3661 1506 378 125 0 16 chr20 918414 918478 -71235404 - MER41D-int LTR ERV1 -568 1218 1156 * 25 65 0 0 chr20 918478 918524 -71235358 + AT_rich Low_complexity Low_complexity 1 46 0 2002 166 0 3 chr20 918528 918841 -71235041 + AluJo SINE Alu 1 312 0 1173 169 4 30 chr20 918851 919087 -71234795 - LTR57-int LTR ERVL -4658 685 456 313 176 67 28 chr20 919446 919547 -71234335 - MER41D-int LTR ERV1 -5851 95 1 2855 197 16 2 chr20 919547 920096 -71233786 - MER41D LTR ERV1 0 557 1 293 236 16 110 chr20 920740 920867 -71233015 + MIR SINE MIR 112 226 -36 184 323 0 15 chr20 920999 921064 -71232818 - MIR SINE MIR -63 145 82 451 286 82 15 chr20 921212 921418 -71232464 + MIR SINE MIR 28 247 -15 921 280 89 32 chr20 921672 921921 -71231961 + L2 LINE L2 2922 3200 -113 1745 193 22 16 chr20 921921 921991 -71231891 - MLT1A1 LTR MaLR 0 365 297 1968 123 41 10 chr20 921991 922284 -71231598 + AluSx SINE Alu 1 302 -10 1745 193 22 16 chr20 922284 922576 -71231306 - MLT1A1 LTR MaLR -68 297 1 921 280 89 32 chr20 922576 922697 -71231185 + L2 LINE L2 3200 3313 0 270 237 0 0 chr20 922718 922777 -71231105 - L2 LINE L2 -14 3258 3200 595 165 0 0 chr20 922875 922984 -71230898 + MSTA LTR MaLR 1 109 -319 364 227 114 8 chr20 922992 923124 -71230758 + L1M4 LINE L1 3804 3949 -2197 4980 58 0 0 chr20 923124 923762 -71230120 - L1PA7 LINE L1 -4 6150 5513 1941 148 34 0 chr20 923762 924086 -71229796 + MSTA LTR MaLR 94 428 0 362 298 69 23 chr20 924214 924345 -71229537 - MIR3 SINE MIR -63 145 9 313 242 88 0 chr20 924449 924540 -71229342 - MLT1K LTR MaLR -81 507 409 544 270 130 36 chr20 924709 925084 -71228798 + MLT1J LTR MaLR 59 511 0 226 269 39 39 chr20 925547 925651 -71228231 + MIR SINE MIR 24 127 -135 379 283 41 62 chr20 925847 926154 -71227728 + MLT1J2 LTR MaLR 31 408 -38 274 303 42 49 chr20 926436 926578 -71227304 - MIR SINE MIR -8 254 114 876 260 70 57 chr20 926666 927123 -71226759 - L2 LINE L2 -31 3282 2820 204 200 0 0 chr20 927299 927344 -71226538 + CT-rich Low_complexity Low_complexity 1 45 0 1037 240 80 96 chr20 927473 927681 -71226201 - MER41C LTR ERV1 -9 545 335 1946 135 17 3 chr20 927681 927969 -71225913 + AluJb SINE Alu 14 305 -7 1037 240 80 96 chr20 927969 928098 -71225784 - MER41C LTR ERV1 -219 335 205 2279 94 0 7 chr20 928098 928417 -71225465 - AluY SINE Alu 0 311 1 1037 240 80 96 chr20 928417 928629 -71225253 - MER41C LTR ERV1 -349 205 4 290 274 77 0 chr20 928632 928749 -71225133 + MIR3 SINE MIR 33 158 -50 * 479 264 74 0 chr20 928745 928866 -71225016 + MIR SINE MIR 61 190 -72 1428 145 137 24 chr20 928973 929228 -71224654 + AluJb SINE Alu 1 284 -28 4970 117 50 25 chr20 929228 929880 -71224002 - MER4D LTR ERV1 -38 865 186 2001 101 59 7 chr20 929880 930168 -71223714 - AluSx SINE Alu -9 303 1 4970 117 50 25 chr20 930168 930359 -71223523 - MER4D LTR ERV1 -717 186 1 427 273 97 3 chr20 931174 931354 -71222528 + MIR SINE MIR 11 249 -13 381 384 69 16 chr20 931707 932085 -71221797 - L1MC4a LINE L1 -1901 5907 5510 629 328 64 0 chr20 932317 932552 -71221330 + MIR SINE MIR 13 262 0 215 223 38 2 chr20 933073 933134 -71220748 + MIR SINE MIR 85 141 -67 343 333 8 25 chr20 933441 933561 -71220321 - L1MC4a LINE L1 -1878 5930 5813 869 138 31 25 chr20 933724 933884 -71219998 - THE1C LTR MaLR -45 330 170 338 256 124 16 chr20 933884 934013 -71219869 - L1MC4a LINE L1 -2043 5765 5623 1912 216 77 17 chr20 934018 934762 -71219120 + L1MC/D LINE L1 4930 5740 -743 1816 162 17 45 chr20 934765 935123 -71218759 - THE1C LTR MaLR 0 375 28 709 128 17 0 chr20 935123 935240 -71218642 + AluSc SINE Alu 178 296 -13 765 238 31 9 chr20 935243 935470 -71218412 - L2 LINE L2 -144 3169 2938 190 169 67 112 chr20 936044 936133 -71217749 + MIR SINE MIR 59 143 -65 369 316 117 23 chr20 936134 936400 -71217482 + L1ME LINE L1 5370 5660 -510 2142 141 3 0 chr20 936542 936912 -71216970 + AluSx SINE Alu 5 375 0 2461 99 0 0 chr20 936987 937299 -71216583 - AluSx SINE Alu 0 312 1 227 364 0 0 chr20 937579 937678 -71216204 + MIR SINE MIR 139 237 -25 322 333 72 9 chr20 938094 938317 -71215565 - MIR SINE MIR -15 247 5 654 312 48 82 chr20 938769 939178 -71214704 - L1MC4a LINE L1 -1748 6060 5682 2304 77 0 7 chr20 939178 939485 -71214397 - AluY SINE Alu 0 305 1 654 312 48 82 chr20 939485 939766 -71214116 - L1MC4a LINE L1 -2126 5682 5393 532 244 19 19 chr20 939962 940118 -71213764 + MIR SINE MIR 101 256 -6 517 200 86 100 chr20 940139 940265 -71213617 - MIR SINE MIR -1 261 138 2585 43 13 3 chr20 940265 940569 -71213313 + AluY SINE Alu 1 307 -4 517 200 86 100 chr20 940569 940652 -71213230 - MIR SINE MIR -124 138 55 588 223 104 75 chr20 940727 940982 -71212900 - MLT1G LTR MaLR -2 588 286 350 233 0 0 chr20 941378 941451 -71212431 + L2 LINE L2 3241 3313 0 185 328 31 0 chr20 941628 941692 -71212190 + MIR SINE MIR 186 251 -11 1733 209 0 0 chr20 941800 942111 -71211771 + AluJo SINE Alu 1 311 -1 313 198 22 77 chr20 943118 943209 -71210673 + L1MCa LINE L1 1979 2064 -4362 2161 129 10 3 chr20 943213 943515 -71210367 + AluJo SINE Alu 1 304 -8 183 80 0 0 chr20 943518 943543 -71210339 + (CA)n Simple_repeat Simple_repeat 2 26 0 297 253 21 32 chr20 943691 943786 -71210096 - MER5A DNA MER1_type -69 120 27 308 282 23 46 chr20 943824 943955 -71209927 - MIR SINE MIR -59 149 22 431 217 12 42 chr20 944917 945083 -71208799 + G-rich Low_complexity Low_complexity 5 165 0 184 149 85 0 chr20 945218 945265 -71208617 + MIR SINE MIR 82 132 -76 292 234 8 23 chr20 945866 945999 -71207883 + GA-rich Low_complexity Low_complexity 1 130 0 252 271 24 0 chr20 946015 946100 -71207782 + GA-rich Low_complexity Low_complexity 1 87 0 215 133 22 0 chr20 946115 946160 -71207722 + GA-rich Low_complexity Low_complexity 2 47 0 252 306 102 10 chr20 946754 946852 -71207030 - MIR SINE MIR 0 262 156 312 229 0 0 chr20 947613 947696 -71206186 + (CCCA)n Simple_repeat Simple_repeat 4 86 0 581 228 6 0 chr20 947709 947871 -71206011 + (CCCA)n Simple_repeat Simple_repeat 4 166 0 644 274 110 48 chr20 947888 948242 -71205640 - L2 LINE L2 0 3313 2938 182 273 0 0 chr20 948556 948600 -71205282 + MIR SINE MIR 47 90 -172 748 263 0 22 chr20 948669 948848 -71205034 + MIR SINE MIR 52 226 -36 434 328 149 13 chr20 948934 949309 -71204573 + MER20B DNA MER1_type 27 452 -331 605 254 12 12 chr20 949391 949564 -71204318 + MER20B DNA MER1_type 611 783 0 198 0 0 0 chr20 949988 950010 -71203872 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 221 317 156 10 chr20 950201 950406 -71203476 - L2 LINE L2 -221 3051 2817 382 311 0 0 chr20 950522 950612 -71203270 - L1MC4 LINE L1 -1339 6703 6614 321 242 0 0 chr20 950644 950706 -71203176 - L1MC4 LINE L1 -1339 6703 6642 191 256 122 0 chr20 950739 950821 -71203061 - MIR SINE MIR -94 168 77 350 336 0 16 chr20 950878 951003 -71202879 - L2 LINE L2 0 3313 3191 656 270 20 15 chr20 951577 951781 -71202101 + L2 LINE L2 3109 3313 0 731 264 8 72 chr20 952181 952431 -71201451 - MIR SINE MIR -7 255 22 1675 158 44 11 chr20 952431 952746 -71201136 + AluJo SINE Alu 1 324 0 187 328 16 0 chr20 953368 953432 -71200450 - MIR SINE MIR -86 122 58 1931 244 16 5 chr20 954082 954508 -71199374 + MLT1J LTR MaLR 74 504 -7 1938 167 20 0 chr20 954884 955184 -71198698 + AluJo SINE Alu 1 306 -6 215 208 0 21 chr20 956096 956144 -71197738 + CT-rich Low_complexity Low_complexity 4 50 0 1827 160 10 10 chr20 956686 956992 -71196890 - AluJo SINE Alu -6 306 1 896 209 68 0 chr20 957042 957219 -71196663 - MER5A DNA MER1_type 0 189 1 437 255 47 63 chr20 957220 957518 -71196364 + L1ME3 LINE L1 5650 5948 -214 21 0 0 0 chr20 957612 957633 -71196249 + AT_rich Low_complexity Low_complexity 1 21 0 470 256 70 58 chr20 957870 957916 -71195966 + MLT1J LTR MaLR 19 63 -448 2061 133 0 3 chr20 957916 958216 -71195666 - AluJb SINE Alu -13 299 1 470 256 70 58 chr20 958216 958341 -71195541 + MLT1J LTR MaLR 63 192 -319 298 225 62 12 chr20 958857 958937 -71194945 - MIR SINE MIR -63 145 62 294 283 71 10 chr20 959152 959251 -71194631 - MIR3 SINE MIR -28 180 76 1653 99 5 14 chr20 959290 959561 -71194321 - AluSg/x SINE Alu 0 334 66 564 269 78 42 chr20 960387 960776 -71193106 + MLT1K LTR MaLR 150 588 0 233 192 77 0 chr20 961555 961607 -71192275 - L2 LINE L2 -3 3269 3214 578 244 75 12 chr20 961632 961792 -71192090 + MIR SINE MIR 79 248 -14 270 298 230 12 chr20 961878 962039 -71191843 + MIR SINE MIR 47 242 -20 576 253 101 17 chr20 962676 962854 -71191028 + Charlie8 DNA MER1_type 84 276 -2141 1084 144 11 11 chr20 962967 963155 -71190727 - MER5A DNA MER1_type 0 189 2 594 245 14 14 chr20 963173 963320 -71190562 + MIR SINE MIR 36 182 -80 668 296 5 23 chr20 964027 964247 -71189635 + MIR SINE MIR 41 256 -6 574 274 121 18 chr20 964805 965028 -71188854 + L2 LINE L2 2341 2586 -728 444 308 100 23 chr20 965031 965203 -71188679 + L2 LINE L2 2842 2999 -314 1410 281 7 26 chr20 965203 965655 -71188227 + LTR47B LTR ERVL 1 443 0 444 308 100 23 chr20 965655 965833 -71188049 + L2 LINE L2 2999 3219 -94 509 243 62 8 chr20 965946 966100 -71187782 - MIR SINE MIR -79 129 4 251 224 30 69 chr20 966585 966704 -71187178 - MER5A DNA MER1_type 0 189 63 213 273 0 18 chr20 966891 966946 -71186936 - MIR SINE MIR -99 163 110 2125 120 3 0 chr20 967093 967385 -71186497 + AluSx SINE Alu 1 293 -19 212 0 0 35 chr20 967388 967417 -71186465 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 232 239 0 0 chr20 968394 968440 -71185442 + L2 LINE L2 3261 3306 -7 240 313 24 12 chr20 969023 969106 -71184776 + MIR SINE MIR 23 106 -102 232 197 167 15 chr20 969477 969543 -71184339 + MIR SINE MIR 105 180 -82 549 232 96 0 chr20 969664 969789 -71184093 - MIR SINE MIR -85 177 41 2194 115 0 10 chr20 969906 970202 -71183680 + AluSg SINE Alu 1 293 -17 387 250 22 0 chr20 970592 970684 -71183198 + MIR3 SINE MIR 82 175 -33 1081 144 7 7 chr20 970693 971200 -71182682 + (TCCA)n Simple_repeat Simple_repeat 1 685 0 241 234 0 0 chr20 971200 971247 -71182635 - L2 LINE L2 0 3313 3267 273 278 0 56 chr20 971351 971441 -71182441 + L2 LINE L2 3188 3272 0 306 281 25 46 chr20 972604 972800 -71181082 + L1M3 LINE L1 5258 5449 -731 258 327 30 0 chr20 972898 972999 -71180883 - MIR SINE MIR -65 143 40 250 236 236 11 chr20 973257 973346 -71180536 + MIR SINE MIR 32 140 -122 1990 151 0 16 chr20 973356 973661 -71180221 + AluJo SINE Alu 3 302 -10 709 257 229 12 chr20 973690 974320 -71179562 - L2 LINE L2 -2 3270 2497 189 244 183 37 chr20 974310 974392 -71179490 + MIR SINE MIR 163 256 -6 * 2271 123 0 0 chr20 974393 974701 -71179181 - AluSx SINE Alu -4 308 1 470 282 93 39 chr20 975077 975294 -71178588 + MIR SINE MIR 16 243 -19 182 273 23 0 chr20 975322 975366 -71178516 + L2 LINE L2 3250 3294 -19 206 280 0 0 chr20 975571 975621 -71178261 + MIR SINE MIR 114 163 -99 418 297 30 13 chr20 975771 975974 -71177908 - MIR SINE MIR -19 243 38 555 165 31 0 chr20 976282 976409 -71177473 + CT-rich Low_complexity Low_complexity 2 132 0 219 129 0 0 chr20 976413 976444 -71177438 + (TC)n Simple_repeat Simple_repeat 2 32 0 732 203 0 0 chr20 976957 977090 -71176792 - FLAM_A SINE Alu 0 133 1 463 300 150 40 chr20 977338 977791 -71176091 + L1M2 LINE L1 1737 4247 -2601 365 0 0 0 chr20 978114 978165 -71175717 - AluSp/q SINE Alu 0 303 253 229 229 16 16 chr20 978176 978237 -71175645 - MIR SINE MIR -122 140 80 366 280 134 25 chr20 978428 978585 -71175297 - MIR SINE MIR -42 220 47 421 217 0 0 chr20 978692 978775 -71175107 - MIR SINE MIR -117 145 63 343 277 21 43 chr20 979325 979466 -71174416 + MIR SINE MIR 47 184 -78 245 209 23 105 chr20 979482 979568 -71174314 + MIR SINE MIR 7 85 -177 346 171 29 0 chr20 979569 979639 -71174243 + MER116 DNA Mariner 4 75 -5 355 173 62 12 chr20 979647 979728 -71174154 + MIR SINE MIR 108 192 -70 722 238 132 5 chr20 979748 979937 -71173945 + MIR SINE MIR 13 225 -37 2183 118 0 24 chr20 980417 980714 -71173168 - AluSx SINE Alu -22 290 1 218 293 94 12 chr20 980887 981016 -71172866 + MIR3 SINE MIR 56 202 -6 275 369 15 0 chr20 981174 981304 -71172578 + MIR SINE MIR 60 191 -71 251 343 157 0 chr20 981484 981618 -71172264 + MIR SINE MIR 28 182 -80 231 323 0 0 chr20 981723 981785 -71172097 + (CA)n Simple_repeat Simple_repeat 2 63 0 258 143 77 55 chr20 981787 981878 -71172004 + MER112 DNA MER1_type 60 152 -108 448 228 43 0 chr20 981945 982037 -71171845 + MER58C DNA MER1_type 118 213 -2 356 102 0 17 chr20 982057 982116 -71171766 + (CATTC)n Simple_repeat Simple_repeat 2 59 0 272 220 34 0 chr20 982395 982454 -71171428 - MER58 DNA MER1_type -25 2395 130 236 309 0 15 chr20 982519 982587 -71171295 + L2 LINE L2 3235 3301 -12 379 262 82 33 chr20 982858 982980 -71170902 + MIR SINE MIR 24 151 -111 180 188 0 0 chr20 983244 983276 -71170606 - L2 LINE L2 -19 3294 3263 247 328 35 34 chr20 983604 983782 -71170100 - MIR3 SINE MIR -64 144 12 347 316 85 24 chr20 983813 984031 -71169851 - MIR SINE MIR -15 247 13 231 287 66 33 chr20 984543 984665 -71169217 + L2 LINE L2 3146 3271 -1 1915 116 3 89 chr20 984836 985163 -71168719 - AluJb SINE Alu -11 301 3 267 147 191 0 chr20 985194 985262 -71168620 - MER103 DNA DNA -85 81 1 277 196 22 141 chr20 985676 985717 -71168165 - MIR3 SINE MIR -24 184 157 2223 107 0 0 chr20 985717 986019 -71167863 - AluSx SINE Alu 0 302 1 277 196 22 141 chr20 986019 986068 -71167814 - MIR3 SINE MIR -51 157 104 504 236 19 9 chr20 986104 986210 -71167672 + MIR SINE MIR 39 145 -63 578 283 16 2 chr20 986417 986582 -71167300 - MIR SINE MIR -21 187 12 236 320 75 34 chr20 986908 987055 -71166827 + MIR SINE MIR 76 228 -34 22 35 0 0 chr20 988076 988105 -71165777 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr20 988207 988230 -71165652 + GC_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr20 988240 988276 -71165606 + GC_rich Low_complexity Low_complexity 1 36 0 534 279 78 22 chr20 989075 989254 -71164628 - MIR SINE MIR -5 257 69 2463 96 0 3 chr20 989382 989695 -71164187 - AluSx SINE Alu 0 312 1 273 385 7 7 chr20 989907 990050 -71163832 - MIR3 SINE MIR -23 185 43 482 292 172 43 chr20 990057 990486 -71163396 + L2 LINE L2 2781 3272 0 441 274 280 26 chr20 990684 991110 -71162772 + L2 LINE L2 2787 3313 0 203 355 36 36 chr20 991124 991262 -71162620 + MIR3 SINE MIR 71 208 0 658 138 24 67 chr20 991641 991790 -71162092 - MLT1J2 LTR MaLR -311 139 14 214 256 198 0 chr20 991806 991892 -71161990 + L2 LINE L2 2589 2691 -623 278 157 20 0 chr20 991978 992029 -71161853 + MER81 DNA DNA 1 52 -62 4397 223 49 36 chr20 992054 992214 -71161668 - L1MD1 LINE L1 -122 6120 5964 1960 136 25 0 chr20 992214 992500 -71161382 - AluJb SINE Alu -19 293 1 4397 223 49 36 chr20 992500 994308 -71159574 - L1MD1 LINE L1 -278 5964 3639 1162 204 225 43 chr20 994287 994357 -71159525 + L1MDb LINE L1 732 788 -5621 * 2325 108 3 3 chr20 994357 994662 -71159220 + AluSx SINE Alu 1 305 -7 1162 204 225 43 chr20 994662 995031 -71158851 + L1MDb LINE L1 788 1251 -5158 713 228 35 93 chr20 995038 995328 -71158554 + LTR16C LTR ERVL 218 490 -1 1026 209 48 4 chr20 996003 996233 -71157649 + MIR SINE MIR 23 262 0 376 235 96 0 chr20 996425 996540 -71157342 - MIR3 SINE MIR -24 184 59 298 301 98 21 chr20 997646 997789 -71156093 + MIR SINE MIR 103 256 -6 982 254 98 0 chr20 997836 998072 -71155810 + MIR SINE MIR 4 262 0 743 280 177 24 chr20 998341 998759 -71155123 - L2 LINE L2 0 3313 2832 322 192 36 34 chr20 999103 999242 -71154640 - MIR SINE MIR -63 145 3 498 239 155 0 chr20 999591 999746 -71154136 + LTR16C LTR ERVL 149 327 -164 743 252 98 28 chr20 1000117 1000403 -71153479 + L2 LINE L2 2867 3172 -141 1705 126 0 8 chr20 1000654 1000936 -71152946 + AluSq SINE Alu 47 326 0 478 270 44 19 chr20 1001064 1001223 -71152659 - MLT1J LTR MaLR -348 163 1 220 244 0 0 chr20 1001740 1001797 -71152085 + MIR SINE MIR 97 143 -65 2195 144 0 0 chr20 1002100 1002413 -71151469 - AluSq SINE Alu 0 313 1 297 289 118 0 chr20 1002417 1002552 -71151330 + L2 LINE L2 2231 2381 -933 201 206 0 82 chr20 1002602 1002675 -71151207 + C-rich Low_complexity Low_complexity 3 69 0 658 209 58 62 chr20 1002820 1003045 -71150837 + LTR16C LTR ERVL 160 383 -108 383 267 17 17 chr20 1003210 1003326 -71150556 + L2 LINE L2 2934 3049 -223 249 227 83 83 chr20 1003414 1003546 -71150336 - L2 LINE L2 -1 3271 3140 656 224 75 0 chr20 1003681 1003842 -71150040 + MER58A DNA MER1_type 34 206 -18 603 133 11 51 chr20 1003854 1003990 -71149892 - MLT1F LTR MaLR -46 547 389 286 167 0 0 chr20 1003965 1004013 -71149869 - MLT1F LTR MaLR -293 249 202 * 570 298 81 10 chr20 1004029 1004227 -71149655 - MIR SINE MIR -48 214 3 243 282 51 54 chr20 1004744 1004879 -71149003 + MIR SINE MIR 20 154 -54 356 279 81 22 chr20 1005099 1005235 -71148647 - MIR SINE MIR -71 191 48 196 200 31 0 chr20 1005291 1005356 -71148526 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 224 266 9 0 chr20 1005394 1005503 -71148379 + (TCCA)n Simple_repeat Simple_repeat 3 112 0 383 230 28 0 chr20 1005555 1005812 -71148070 + (TCCA)n Simple_repeat Simple_repeat 1 264 0 1013 280 134 27 chr20 1005818 1006307 -71147575 - L2 LINE L2 -3 3310 2755 340 251 102 58 chr20 1006540 1006735 -71147147 - MIR SINE MIR -49 213 13 228 340 87 13 chr20 1006818 1006968 -71146914 - MIR3 SINE MIR -20 188 28 528 263 40 17 chr20 1007521 1007722 -71146160 + MIR SINE MIR 41 252 -10 288 279 141 66 chr20 1008450 1008755 -71145127 + MLT1K LTR MaLR 261 588 0 327 362 14 14 chr20 1008801 1008942 -71144940 + MIR3 SINE MIR 5 145 -63 438 267 20 62 chr20 1009325 1009354 -71144528 + L1MC4a LINE L1 5178 5207 -939 1799 166 82 0 chr20 1009354 1009685 -71144197 - MER46B DNA MER2_type 0 236 4 438 267 20 62 chr20 1009685 1009850 -71144032 + L1MC4a LINE L1 5207 5364 -782 230 232 12 73 chr20 1009851 1009933 -71143949 + L1MC4a LINE L1 5456 5532 -589 551 305 30 30 chr20 1009934 1010134 -71143748 + L2 LINE L2 3114 3313 0 431 308 91 18 chr20 1010185 1010526 -71143356 + L1MC4a LINE L1 5564 5929 -1879 2111 105 4 4 chr20 1010539 1010867 -71143015 + AluSg SINE Alu 3 330 0 198 103 0 0 chr20 1010893 1010922 -71142960 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 586 279 78 7 chr20 1011061 1011344 -71142538 - L1ME3A LINE L1 -12 6158 5856 1881 191 71 28 chr20 1011410 1011903 -71141979 - L1MC4 LINE L1 -285 7757 7244 6477 77 44 3 chr20 1011925 1012405 -71141477 - L1PA13 LINE L1 -11 6152 5693 2285 130 0 0 chr20 1012405 1012713 -71141169 - AluSx SINE Alu -4 308 1 6477 77 44 3 chr20 1012713 1013340 -71140542 - L1PA13 LINE L1 -470 5693 5024 451 280 25 65 chr20 1015193 1015393 -71138489 + MIR SINE MIR 48 239 -23 323 332 151 11 chr20 1015497 1015762 -71138120 + L2 LINE L2 2955 3256 -16 400 211 189 11 chr20 1015958 1016053 -71137829 - MER81 DNA DNA -2 112 1 227 295 21 53 chr20 1016149 1016186 -71137696 + LTR67 LTR ERVL 81 169 -385 328 146 0 0 chr20 1016186 1016241 -71137641 + MLT1J2 LTR MaLR 72 126 -324 * 739 238 155 0 chr20 1016208 1016460 -71137422 + MLT1L LTR MaLR 196 486 -129 2233 197 65 121 chr20 1016468 1016752 -71137130 + L1ME3 LINE L1 5142 5441 -721 2256 107 3 0 chr20 1016752 1017043 -71136839 + AluSp SINE Alu 3 294 -19 2233 197 65 121 chr20 1017043 1017829 -71136053 + L1ME3 LINE L1 5441 6160 -2 408 320 20 70 chr20 1018008 1018127 -71135755 - MIR SINE MIR -65 197 90 2073 111 10 0 chr20 1018127 1018425 -71135457 - AluSx SINE Alu -11 301 1 408 320 20 70 chr20 1018425 1018505 -71135377 - MIR SINE MIR -172 90 8 255 213 150 0 chr20 1018703 1018783 -71135099 + Charlie7 DNA MER1_type 14 105 -2507 * 262 216 32 48 chr20 1018776 1018901 -71134981 + Charlie7 DNA MER1_type 2440 2562 -50 800 203 6 0 chr20 1018994 1019152 -71134730 - FRAM SINE Alu -12 164 6 595 173 0 38 chr20 1019193 1019326 -71134556 + L1MA4 LINE L1 6173 6300 0 229 250 91 91 chr20 1019365 1019585 -71134297 - HAL1 LINE L1 -473 2034 1815 514 271 121 53 chr20 1019669 1020098 -71133784 + MLT1H LTR MaLR 35 539 -10 284 135 19 0 chr20 1020103 1020155 -71133727 - HAL1 LINE L1 -762 1745 1693 1593 246 127 14 chr20 1020162 1020651 -71133231 + MLT1H1 LTR MaLR 10 552 -3 381 222 174 107 chr20 1020746 1021223 -71132659 - HAL1 LINE L1 -1425 1082 574 312 344 99 18 chr20 1021230 1021451 -71132431 - HAL1 LINE L1 -2001 506 268 460 283 213 22 chr20 1022038 1022310 -71131572 + L2 LINE L2 2990 3313 0 528 254 148 0 chr20 1023480 1023649 -71130233 - MIR SINE MIR 0 262 69 438 256 17 26 chr20 1023699 1023816 -71130066 + L2 LINE L2 3197 3312 -1 633 203 105 7 chr20 1024411 1024564 -71129318 - MIR SINE MIR -10 252 85 274 244 146 12 chr20 1024811 1024893 -71128989 - MIR3 SINE MIR -10 198 106 235 247 173 80 chr20 1025346 1025508 -71128374 + L3 LINE CR1 996 1172 -405 1804 140 56 0 chr20 1025682 1025968 -71127914 + AluSx SINE Alu 1 302 -10 715 283 123 49 chr20 1025969 1026456 -71127426 + Charlie1b DNA MER1_type 1 523 0 249 380 10 0 chr20 1026456 1026556 -71127326 + L3 LINE CR1 1366 1466 -111 984 320 78 12 chr20 1026645 1027205 -71126677 + L2 LINE L2 2714 3312 -1 201 121 0 0 chr20 1027215 1027248 -71126634 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 407 283 108 0 chr20 1027959 1028079 -71125803 + L2 LINE L2 3180 3312 -1 649 239 78 58 chr20 1028093 1028298 -71125584 - MIR SINE MIR -50 212 4 370 245 129 52 chr20 1028307 1028462 -71125420 + MIR SINE MIR 70 236 -26 365 283 51 0 chr20 1028779 1028918 -71124964 - MIR SINE MIR -55 153 5 903 283 100 6 chr20 1029116 1029466 -71124416 - LTR16A LTR ERVL -8 442 60 404 239 127 14 chr20 1029613 1029755 -71124127 - MIR SINE MIR -62 200 43 231 309 84 46 chr20 1029829 1030091 -71123791 - L2 LINE L2 -86 3186 2915 425 254 179 17 chr20 1031162 1031335 -71122547 - MLT1K LTR MaLR -12 576 376 307 226 98 53 chr20 1031552 1031685 -71122197 - MIR SINE MIR -93 169 31 282 283 0 0 chr20 1031824 1031983 -71121899 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 188 289 105 53 chr20 1032438 1032590 -71121292 - MIR3 SINE MIR -21 187 28 730 262 109 23 chr20 1032767 1033023 -71120859 - L2 LINE L2 -8 3305 3028 1066 226 131 27 chr20 1033039 1033397 -71120485 + MLT1J2 LTR MaLR 16 381 -69 737 291 216 12 chr20 1033432 1033844 -71120038 - L2 LINE L2 -343 2971 2476 1468 245 134 31 chr20 1034514 1035053 -71118829 + MLT1G1 LTR MaLR 1 594 -1 293 292 50 50 chr20 1035467 1035587 -71118295 - L2 LINE L2 -1 3312 3193 635 278 87 57 chr20 1035587 1035736 -71118146 + L2 LINE L2 2920 3063 -250 1893 145 10 3 chr20 1035736 1036039 -71117843 - AluSx SINE Alu -7 305 1 635 278 87 57 chr20 1036039 1036256 -71117626 + L2 LINE L2 3063 3297 -16 776 235 107 21 chr20 1036764 1036998 -71116884 + MIR SINE MIR 4 257 -5 892 186 27 27 chr20 1037102 1037285 -71116597 + L2 LINE L2 3127 3309 -4 26 30 0 0 chr20 1037819 1037852 -71116030 + AT_rich Low_complexity Low_complexity 1 33 0 544 289 57 0 chr20 1038193 1038352 -71115530 + MIR SINE MIR 20 187 -75 189 260 40 0 chr20 1038369 1038419 -71115463 - L2 LINE L2 -11 3261 3210 375 290 99 0 chr20 1039145 1039276 -71114606 - MIR SINE MIR -23 239 96 210 269 170 35 chr20 1039471 1039642 -71114240 + MIR SINE MIR 39 232 -30 1624 134 6 113 chr20 1039642 1039977 -71113905 + AluSx SINE Alu 2 300 -2 374 240 33 16 chr20 1040101 1040222 -71113660 + L1ME4a LINE L1 5960 6082 -39 1939 122 3 3 chr20 1040496 1040783 -71113099 - AluSx SINE Alu -25 287 1 285 246 52 44 chr20 1040854 1040976 -71112906 + MER5A DNA MER1_type 9 141 -48 196 313 0 45 chr20 1041012 1041079 -71112803 - MIR3 SINE MIR -43 165 102 217 284 25 12 chr20 1041417 1041498 -71112384 + MIR SINE MIR 111 192 -70 274 347 113 16 chr20 1041708 1041956 -71111926 + L2 LINE L2 2636 2907 -407 1643 170 87 32 chr20 1042774 1043144 -71110738 + MLT1B LTR MaLR 1 390 0 705 214 49 86 chr20 1043170 1043413 -71110469 - MER106A DNA MER1_type 0 236 3 470 281 87 56 chr20 1043438 1043656 -71110226 + MLT1L LTR MaLR 200 470 -145 1940 117 14 0 chr20 1043656 1043938 -71109944 - AluSq SINE Alu -27 286 1 470 281 87 56 chr20 1043938 1044085 -71109797 + MLT1L LTR MaLR 470 611 -4 453 275 155 40 chr20 1044091 1044342 -71109540 - MLT1K LTR MaLR -302 286 7 289 286 109 54 chr20 1044547 1044694 -71109188 - L2 LINE L2 0 3272 3118 764 299 48 81 chr20 1045104 1045295 -71108587 - LTR16A LTR ERVL 0 450 277 748 97 0 18 chr20 1045295 1045409 -71108473 + L1MA2 LINE L1 6193 6304 0 764 299 48 81 chr20 1045409 1045611 -71108271 - LTR16A LTR ERVL -173 277 70 325 299 37 0 chr20 1045938 1046045 -71107837 - MIR SINE MIR -3 259 149 579 232 222 40 chr20 1046820 1047162 -71106720 - MLT1H LTR MaLR -25 384 30 240 250 0 0 chr20 1047336 1047384 -71106498 + L2 LINE L2 2995 3042 -271 278 326 33 0 chr20 1047473 1047565 -71106317 + MIR SINE MIR 60 154 -108 454 189 189 8 chr20 1047573 1047705 -71106177 - MLT1L LTR MaLR -2 613 458 436 20 0 0 chr20 1047758 1047809 -71106073 + MADE1 DNA Mariner 2 52 -28 557 57 0 0 chr20 1047812 1047882 -71106000 + MADE1 DNA Mariner 7 76 -4 270 77 0 96 chr20 1047862 1047914 -71105968 + MADE1 DNA Mariner 32 78 -2 * 457 316 163 3 chr20 1048418 1048706 -71105176 + L2 LINE L2 1873 2206 -1108 * 1001 204 6 0 chr20 1048704 1048885 -71104997 - MER5A DNA MER1_type -6 183 2 * 1779 322 93 16 chr20 1048885 1048917 -71104965 + L2 LINE L2 2172 2200 -1113 728 225 23 17 chr20 1048917 1049090 -71104792 - MER5B DNA MER1_type -3 175 2 1779 322 93 16 chr20 1049090 1050114 -71103768 + L2 LINE L2 2200 3298 -15 212 313 0 0 chr20 1050114 1050162 -71103720 + polypurine Low_complexity Low_complexity 5 52 0 274 321 64 9 chr20 1050330 1050439 -71103443 + L2 LINE L2 3158 3272 0 327 233 381 0 chr20 1050974 1051163 -71102719 + L2 LINE L2 2905 3165 -148 21 95 0 0 chr20 1051178 1051241 -71102641 + AT_rich Low_complexity Low_complexity 1 63 0 2295 100 0 0 chr20 1051500 1051801 -71102081 - AluSc SINE Alu -8 301 1 1493 265 47 22 chr20 1051884 1052630 -71101252 - L1MEc LINE L1 -4714 1880 934 1540 271 149 17 chr20 1053199 1053842 -71100040 + L2 LINE L2 1252 1979 -1335 391 264 11 0 chr20 1053844 1053935 -71099947 + L2 LINE L2 2081 2172 -1142 969 181 65 138 chr20 1053965 1054335 -71099547 - MLT1A1 LTR MaLR -22 343 1 320 277 71 9 chr20 1054339 1054451 -71099431 + L2 LINE L2 2186 2304 -1010 513 296 90 17 chr20 1054708 1055052 -71098830 - L1ME LINE L1 -533 5629 5261 257 284 61 41 chr20 1055169 1055366 -71098516 - L1ME3A LINE L1 -5 6165 5965 2531 245 49 50 chr20 1055450 1055863 -71098019 - L1MC5 LINE L1 -429 7532 7120 1649 177 32 62 chr20 1055863 1056264 -71097618 + MLT1B LTR MaLR 1 389 -1 2531 245 49 50 chr20 1056264 1056920 -71096962 - L1MC5 LINE L1 -841 7120 6471 229 278 67 100 chr20 1057156 1057323 -71096559 - HAL1b LINE L1 -690 658 487 2161 106 0 0 chr20 1057323 1057616 -71096266 + AluSx SINE Alu 1 293 -19 229 278 67 100 chr20 1057616 1057787 -71096095 - HAL1b LINE L1 -861 487 312 2257 89 3 0 chr20 1057787 1058091 -71095791 + AluSg SINE Alu 1 305 -5 229 278 67 100 chr20 1058091 1058363 -71095519 - HAL1b LINE L1 -1036 312 67 1316 178 50 23 chr20 1058846 1059105 -71094777 - MLT1C LTR MaLR -201 266 1 2091 136 120 26 chr20 1059450 1059690 -71094192 - MSTA LTR MaLR 0 428 135 2052 132 0 0 chr20 1059690 1059993 -71093889 + AluSx SINE Alu 1 303 -9 2091 136 120 26 chr20 1059993 1060143 -71093739 - MSTA LTR MaLR -293 135 1 229 263 32 0 chr20 1060438 1060533 -71093349 + MER113 DNA MER1_type? 39 136 -385 26 50 0 0 chr20 1060533 1060573 -71093309 + AT_rich Low_complexity Low_complexity 1 40 0 1216 263 22 19 chr20 1060927 1061084 -71092798 + MER113 DNA MER1_type? 156 311 -210 919 127 0 15 chr20 1061084 1061218 -71092664 + FLAM_C SINE Alu 1 132 -1 1216 263 22 19 chr20 1061218 1061425 -71092457 + MER113 DNA MER1_type? 311 521 0 351 204 57 34 chr20 1061505 1061593 -71092289 - MLT1H LTR MaLR -6 543 454 494 253 71 45 chr20 1061680 1061834 -71092048 - MLT1H LTR MaLR -226 323 166 266 213 82 16 chr20 1061848 1061909 -71091973 - MLT1H LTR MaLR -484 65 1 1968 122 3 7 chr20 1062457 1062752 -71091130 + AluSx SINE Alu 1 294 -18 1962 216 61 49 chr20 1062812 1063711 -71090171 - L1MDa LINE L1 -3413 3127 2205 249 260 52 10 chr20 1063711 1063807 -71090075 + MER69 DNA AcHobo 2412 2511 -15 1802 134 30 23 chr20 1063817 1064116 -71089766 + AluSx SINE Alu 3 303 -9 1851 114 0 0 chr20 1064597 1064851 -71089031 - AluSx SINE Alu -58 254 1 704 230 29 113 chr20 1064855 1065199 -71088683 + L2 LINE L2 2988 3302 -11 198 0 0 0 chr20 1065199 1065221 -71088661 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 798 264 55 78 chr20 1065843 1066104 -71087778 - MER102b DNA MER1_type -1102 326 72 2128 204 131 17 chr20 1066104 1066632 -71087250 - MLT1G LTR MaLR -2 588 1 798 264 55 78 chr20 1066632 1066677 -71087205 - MER102b DNA MER1_type -1356 72 27 1924 155 82 12 chr20 1067072 1067413 -71086469 + MLT1A1 LTR MaLR 1 365 0 272 271 113 40 chr20 1067560 1067711 -71086171 - MIR SINE MIR -71 191 30 191 305 126 46 chr20 1067729 1067903 -71085979 - L2 LINE L2 -421 2893 2706 339 293 91 47 chr20 1068263 1068516 -71085366 + MLT1K LTR MaLR 210 473 -115 190 225 7 176 chr20 1068607 1068659 -71085223 + MIR SINE MIR 102 117 -145 2270 122 0 0 chr20 1068659 1068963 -71084919 + AluSx SINE Alu 1 304 -8 190 225 7 176 chr20 1068963 1069052 -71084830 + MIR SINE MIR 117 219 -43 248 227 0 0 chr20 1069077 1069143 -71084739 + L1M4 LINE L1 4489 4554 -1592 1390 195 38 30 chr20 1069259 1069629 -71084253 + MER93b LTR ERV1 1 373 0 925 272 66 12 chr20 1069662 1069997 -71083885 + MLT1I LTR MaLR 39 391 -18 22 0 0 0 chr20 1070161 1070183 -71083699 + AT_rich Low_complexity Low_complexity 1 22 0 456 214 90 28 chr20 1070197 1070342 -71083540 - MER103 DNA DNA -12 154 1 335 260 49 123 chr20 1070435 1070639 -71083243 - MIR SINE MIR -58 204 16 600 238 8 16 chr20 1070968 1071094 -71082788 + MER5A DNA MER1_type 62 186 -3 311 290 39 19 chr20 1071096 1071251 -71082631 + MLT1L LTR MaLR 145 302 -313 290 301 171 22 chr20 1071280 1071596 -71082286 - MLT1J LTR MaLR -27 484 122 534 258 6 30 chr20 1072000 1072167 -71081715 + MIR SINE MIR 86 248 -14 252 59 0 0 chr20 1072872 1072906 -71080976 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 180 290 58 14 chr20 1072955 1073024 -71080858 - L2 LINE L2 0 3272 3201 189 262 16 16 chr20 1073128 1073189 -71080693 - L2 LINE L2 -227 3086 3026 548 268 167 35 chr20 1073315 1073662 -71080220 - MLT1I LTR MaLR 0 409 17 220 289 0 67 chr20 1073684 1073774 -71080108 - L2 LINE L2 -289 2983 2900 416 315 219 0 chr20 1073819 1073965 -71079917 - MIR SINE MIR -83 179 2 424 298 160 45 chr20 1074056 1074505 -71079377 - Charlie8 DNA MER1_type -1891 526 26 2067 234 14 14 chr20 1074540 1075028 -71078854 + MLT1F LTR MaLR 1 488 -54 775 191 78 0 chr20 1075084 1075225 -71078657 - MER58A DNA MER1_type 0 157 6 211 260 41 14 chr20 1075920 1075993 -71077889 + GA-rich Low_complexity Low_complexity 1 75 0 243 297 93 25 chr20 1076183 1076301 -71077581 - MLT1K LTR MaLR -317 271 146 225 224 9 75 chr20 1076287 1076394 -71077488 - MLT1L LTR MaLR -402 213 114 * 487 283 121 56 chr20 1076798 1077120 -71076762 - L2 LINE L2 -94 3178 2836 2239 96 24 0 chr20 1077145 1077438 -71076444 - AluSg SINE Alu -10 300 1 349 230 20 79 chr20 1077785 1077937 -71075945 + L1ME LINE L1 5619 5761 -360 186 294 59 15 chr20 1078027 1078095 -71075787 + MER5C DNA MER1_type 20 90 -234 297 229 14 0 chr20 1078452 1078522 -71075360 - MLT1J LTR MaLR -332 179 109 3584 156 55 35 chr20 1078957 1078991 -71074891 - MER44D DNA MER2_type -1882 605 573 2419 97 0 0 chr20 1078991 1079299 -71074583 - AluSc SINE Alu -1 308 1 3584 156 55 35 chr20 1079299 1079957 -71073925 - MER44D DNA MER2_type -1914 573 27 327 235 0 0 chr20 1079965 1080063 -71073819 + (TA)n Simple_repeat Simple_repeat 1 98 0 22 0 0 0 chr20 1080225 1080247 -71073635 + AT_rich Low_complexity Low_complexity 1 22 0 225 182 73 0 chr20 1080285 1080340 -71073542 + Charlie8 DNA MER1_type 2356 2414 -3 377 263 46 66 chr20 1081029 1081181 -71072701 - MIR3 SINE MIR -29 179 31 224 343 0 57 chr20 1081293 1081363 -71072519 - MIR SINE MIR -111 97 32 221 298 115 0 chr20 1081495 1081599 -71072283 + MIR SINE MIR 77 192 -70 300 27 0 0 chr20 1081680 1081717 -71072165 + (TG)n Simple_repeat Simple_repeat 2 38 0 286 286 12 0 chr20 1081738 1081822 -71072060 + CT-rich Low_complexity Low_complexity 2 86 0 243 0 0 0 chr20 1081990 1082017 -71071865 + (A)n Simple_repeat Simple_repeat 1 27 0 2535 259 67 10 chr20 1082359 1083494 -71070388 - L1ME3A LINE L1 -9 6161 4960 1343 178 39 70 chr20 1083497 1083852 -71070030 - MLT1A2 LTR MaLR 0 374 31 532 271 122 7 chr20 1083914 1084202 -71069680 - L1ME3A LINE L1 -1194 4952 4632 185 260 40 0 chr20 1084769 1084819 -71069063 - MIR SINE MIR 0 262 211 4417 170 49 53 chr20 1084822 1084954 -71068928 - L1ME1 LINE L1 -2 6663 6532 1401 113 19 0 chr20 1084954 1085166 -71068716 + L1MC1 LINE L1 6118 6333 0 4417 170 49 53 chr20 1085166 1085929 -71067953 - L1ME1 LINE L1 -133 6532 5767 1992 91 0 36 chr20 1085929 1086205 -71067677 - AluSq SINE Alu -7 306 41 4417 170 49 53 chr20 1086205 1086606 -71067276 - L1ME1 LINE L1 -898 5767 5366 2286 118 0 10 chr20 1086606 1086919 -71066963 + AluSg SINE Alu 1 310 0 4417 170 49 53 chr20 1086919 1087647 -71066235 - L1ME1 LINE L1 -1299 5366 4654 24 0 0 0 chr20 1087746 1087770 -71066112 + AT_rich Low_complexity Low_complexity 1 24 0 5483 191 63 88 chr20 1087794 1088818 -71065064 - L1ME1 LINE L1 -4574 2072 1137 1797 148 22 11 chr20 1088818 1089096 -71064786 - AluJo SINE Alu -13 299 19 5483 191 63 88 chr20 1089096 1090206 -71063676 - L1ME1 LINE L1 -5509 1137 1 894 169 40 58 chr20 1090207 1090415 -71063467 - MIR SINE MIR -43 219 18 478 261 51 14 chr20 1090445 1090583 -71063299 + MIR3 SINE MIR 24 166 -42 703 191 190 13 chr20 1091061 1091363 -71062519 + L2 LINE L2 2780 3132 -181 226 231 66 33 chr20 1092285 1092376 -71061506 - MIR SINE MIR -41 221 128 779 143 102 168 chr20 1092436 1092848 -71061034 + LTR37A LTR ERV1 42 426 0 320 259 0 25 chr20 1092969 1093050 -71060832 - MIR SINE MIR -60 148 81 222 37 0 0 chr20 1093061 1093088 -71060794 + (TG)n Simple_repeat Simple_repeat 2 28 0 413 209 0 23 chr20 1093353 1093439 -71060443 - MIR SINE MIR -156 106 23 371 234 298 13 chr20 1093452 1093610 -71060272 + MIR SINE MIR 47 249 -13 199 225 0 0 chr20 1093578 1093618 -71060264 + L2 LINE L2 3263 3302 -11 * 446 283 129 39 chr20 1093641 1093874 -71060008 - MIR SINE MIR 0 262 9 685 185 0 30 chr20 1093886 1094021 -71059861 - L2 LINE L2 0 3313 3183 505 293 155 0 chr20 1094712 1094893 -71058989 + MIR SINE MIR 4 212 -50 1353 213 67 6 chr20 1095336 1095697 -71058185 + L1ME1 LINE L1 5503 5885 -281 228 185 19 19 chr20 1096068 1096122 -71057760 + LTR16A LTR ERVL 381 434 -16 812 199 43 78 chr20 1096123 1096216 -71057666 + L1ME1 LINE L1 5903 5998 -336 2222 155 75 10 chr20 1096216 1096616 -71057266 + MSTB LTR MaLR 1 426 0 812 199 43 78 chr20 1096616 1096807 -71057075 + L1ME1 LINE L1 5998 6332 -2 313 213 38 0 chr20 1096838 1096918 -71056964 + L1ME1 LINE L1 6068 6150 -16 2355 96 0 0 chr20 1096924 1097215 -71056667 + AluSx SINE Alu 1 291 -21 373 171 38 38 chr20 1097231 1097336 -71056546 + MER97a DNA MER1_type? 759 863 -31 3076 189 16 0 chr20 1097347 1098071 -71055811 + L1M3 LINE L1 4717 5448 -732 851 137 8 15 chr20 1098072 1098203 -71055679 + FLAM_C SINE Alu 1 130 -13 794 115 21 103 chr20 1098203 1098365 -71055517 + L1MC/D LINE L1 5441 5575 -596 374 193 12 0 chr20 1098365 1098443 -71055439 + L1MB4 LINE L1 6097 6180 0 794 115 21 103 chr20 1098443 1098469 -71055413 + L1MC/D LINE L1 5575 5602 -569 879 95 0 0 chr20 1098478 1098594 -71055288 - AluY SINE Alu -11 300 185 229 260 26 13 chr20 1098733 1098810 -71055072 + L1MB7 LINE L1 2983 3060 -3086 * 250 253 25 13 chr20 1098794 1098873 -71055009 + L1MB7 LINE L1 2981 3060 -3086 238 234 26 13 chr20 1098974 1099051 -71054831 + L1MB7 LINE L1 2972 3049 -3097 229 260 26 13 chr20 1099170 1099247 -71054635 + L1MB7 LINE L1 2983 3060 -3086 * 236 253 25 13 chr20 1099231 1099310 -71054572 + L1MB7 LINE L1 2981 3060 -3086 225 212 30 15 chr20 1099296 1099362 -71054520 + L1MB7 LINE L1 2983 3049 -3097 * 229 260 26 13 chr20 1099359 1099436 -71054446 + L1MB7 LINE L1 2983 3060 -3086 250 253 25 13 chr20 1099546 1099625 -71054257 + L1MB7 LINE L1 2981 3060 -3086 242 253 25 13 chr20 1099672 1099751 -71054131 + L1MB7 LINE L1 2981 3060 -3086 243 247 26 13 chr20 1099863 1099940 -71053942 + L1MB7 LINE L1 2983 3060 -3086 250 253 25 13 chr20 1099987 1100066 -71053816 + L1MB7 LINE L1 2981 3060 -3086 226 194 32 16 chr20 1100115 1100177 -71053705 + L1MB7 LINE L1 2983 3045 -3101 1952 213 92 14 chr20 1100178 1100895 -71052987 + L1MB7 LINE L1 2983 3755 -2391 2785 154 36 11 chr20 1100899 1101410 -71052472 + L1MB7 LINE L1 4256 4753 -1417 1959 115 0 11 chr20 1101410 1101680 -71052202 + AluSq SINE Alu 2 268 -45 2785 154 36 11 chr20 1101680 1101796 -71052086 + L1MB7 LINE L1 4753 5975 -195 2025 154 68 0 chr20 1101796 1102178 -71051704 + L1MD2 LINE L1 5938 6345 -14 2369 215 44 8 chr20 1102190 1102803 -71051079 + L1ME1 LINE L1 5514 6148 -18 808 173 8 8 chr20 1103592 1103725 -71050157 + FLAM_A SINE Alu 1 133 0 2163 122 7 0 chr20 1104793 1105096 -71048786 + AluSx SINE Alu 1 305 -7 460 235 203 45 chr20 1105415 1105726 -71048156 + HAL1 LINE L1 12 371 -2136 857 316 47 26 chr20 1105729 1106195 -71047687 + HAL1 LINE L1 410 885 -1622 560 199 44 82 chr20 1106310 1106545 -71047337 + L1MA10 LINE L1 5949 6332 -2 22 0 0 0 chr20 1106553 1106575 -71047307 + AT_rich Low_complexity Low_complexity 1 22 0 980 253 63 127 chr20 1106575 1106829 -71047053 + HAL1 LINE L1 1024 1293 -1214 337 216 0 14 chr20 1106829 1106903 -71046979 + AluJo SINE Alu 66 138 -164 980 253 63 127 chr20 1106903 1107553 -71046329 + HAL1 LINE L1 1293 1939 -568 3488 37 103 0 chr20 1107680 1108136 -71045746 + L1PA5 LINE L1 5652 6154 0 3205 34 0 0 chr20 1108149 1108532 -71045350 + L1PA5 LINE L1 5770 6152 -2 624 226 167 0 chr20 1108627 1108813 -71045069 + MLT1J LTR MaLR 1 217 -294 576 169 136 32 chr20 1108870 1109024 -71044858 + MLT1J LTR MaLR 342 511 0 536 289 59 33 chr20 1109070 1109343 -71044539 + HAL1 LINE L1 2225 2504 -3 213 39 0 0 chr20 1110318 1110344 -71043538 + (T)n Simple_repeat Simple_repeat 1 26 0 182 323 31 0 chr20 1110875 1110940 -71042942 - L3b LINE CR1 -223 1360 1294 28 61 0 0 chr20 1113704 1113753 -71040129 + AT_rich Low_complexity Low_complexity 1 49 0 212 0 36 0 chr20 1115475 1115503 -71038379 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1855 174 0 0 chr20 1115857 1116155 -71037727 + AluJb SINE Alu 1 298 -14 1745 187 81 49 chr20 1117319 1117789 -71036093 - MER66B LTR ERV1 -1 485 1 2052 121 0 13 chr20 1119263 1119571 -71034311 + AluSx SINE Alu 1 285 -27 30 0 0 0 chr20 1119771 1119801 -71034081 + AT_rich Low_complexity Low_complexity 1 30 0 273 254 21 113 chr20 1120375 1120517 -71033365 - MIR3 SINE MIR -3 205 77 568 247 6 25 chr20 1120938 1121100 -71032782 - MIR SINE MIR -102 160 2 421 265 45 8 chr20 1121694 1121826 -71032056 - MIR SINE MIR -86 176 40 198 0 0 0 chr20 1122252 1122274 -71031608 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2196 122 0 0 chr20 1122322 1122617 -71031265 + AluSx SINE Alu 1 295 -17 798 174 192 25 chr20 1122750 1123026 -71030856 + MER5C DNA MER1_type 1 322 -2 1715 145 40 27 chr20 1123347 1123644 -71030238 + AluJo SINE Alu 1 301 -11 257 238 111 63 chr20 1123870 1123996 -71029886 + L2 LINE L2 3169 3300 -13 2185 253 114 39 chr20 1124456 1124548 -71029334 + L2 LINE L2 1899 1983 -1330 2114 163 14 17 chr20 1124548 1124910 -71028972 + MLT1A1 LTR MaLR 1 361 -4 2185 253 114 39 chr20 1124910 1125227 -71028655 + L2 LINE L2 1983 2275 -1038 1621 141 14 186 chr20 1125227 1125668 -71028214 - MLT1A1 LTR MaLR 0 365 1 2185 253 114 39 chr20 1125668 1126557 -71027325 + L2 LINE L2 2275 3313 0 843 318 110 15 chr20 1126939 1127576 -71026306 + L2 LINE L2 2599 3305 -8 268 307 24 24 chr20 1127690 1127817 -71026065 - L2 LINE L2 -8 3305 3179 187 291 244 0 chr20 1128743 1128829 -71025053 + MIR SINE MIR 20 126 -136 1055 68 0 0 chr20 1128850 1128982 -71024900 - AluSg/x SINE Alu -5 307 176 430 250 192 0 chr20 1128986 1129142 -71024740 - MIR SINE MIR -13 249 64 317 279 23 0 chr20 1129208 1129294 -71024588 + MIR SINE MIR 158 245 -17 2158 93 0 3 chr20 1131179 1131469 -71022413 + AluSx SINE Alu 1 289 -23 234 252 0 73 chr20 1131738 1131861 -71022021 + (CGGGG)n Simple_repeat Simple_repeat 5 118 0 344 136 6 62 chr20 1132360 1132537 -71021345 + (CGGGG)n Simple_repeat Simple_repeat 5 171 0 368 224 14 41 chr20 1132562 1132709 -71021173 + (CGGGG)n Simple_repeat Simple_repeat 2 144 0 180 0 0 0 chr20 1132730 1132750 -71021132 + (CGG)n Simple_repeat Simple_repeat 3 22 0 458 285 86 5 chr20 1133031 1133217 -71020665 + MIR SINE MIR 54 254 -8 186 43 0 0 chr20 1133218 1133241 -71020641 + (TTA)n Simple_repeat Simple_repeat 1 23 0 291 303 62 51 chr20 1133469 1133647 -71020235 - MIR SINE MIR -48 214 35 339 257 89 14 chr20 1133697 1133911 -71019971 + L2 LINE L2 2451 2680 -634 1141 117 6 0 chr20 1133931 1134102 -71019780 + MER1B DNA MER1_type 51 222 -75 499 128 0 26 chr20 1134103 1134181 -71019701 + MER1B DNA MER1_type 254 329 0 2173 99 7 0 chr20 1134224 1134508 -71019374 + AluSx SINE Alu 1 286 -26 1401 124 13 13 chr20 1134532 1134758 -71019124 - LTR13 LTR ERVK 0 1007 782 42006 62 9 6 chr20 1134758 1134888 -71018994 - L1PA5 LINE L1 -1 6153 6025 2274 81 0 17 chr20 1134888 1135185 -71018697 - AluSp SINE Alu -21 292 1 42006 62 9 6 chr20 1135185 1136614 -71017268 - L1PA5 LINE L1 -129 6025 4602 2400 68 0 0 chr20 1136614 1136893 -71016989 + AluY SINE Alu 1 279 -32 983 59 46 0 chr20 1136893 1137046 -71016836 + GA-rich Low_complexity Low_complexity 2 161 0 42006 62 9 6 chr20 1137046 1141615 -71012267 - L1PA5 LINE L1 -1551 4603 4 1562 191 41 61 chr20 1141620 1142384 -71011498 - LTR13 LTR ERVK -207 800 1 190 288 63 54 chr20 1142401 1142512 -71011370 + L2 LINE L2 2734 2845 -469 3331 249 66 16 chr20 1142517 1143382 -71010500 + MER69 DNA AcHobo 5 912 -1614 2503 210 121 21 chr20 1143378 1143435 -71010447 + MER69 DNA AcHobo 1707 1757 -769 * 3008 162 19 47 chr20 1143435 1144008 -71009874 + MER41D LTR ERV1 1 557 0 2503 210 121 21 chr20 1144008 1144694 -71009188 + MER69 DNA AcHobo 1757 2524 -2 418 303 8 8 chr20 1144828 1144947 -71008935 + L2 LINE L2 3191 3309 -4 190 265 174 15 chr20 1145026 1145158 -71008724 - MIR SINE MIR -78 184 32 1128 191 131 72 chr20 1145623 1145978 -71007904 + MLT1D LTR MaLR 34 504 -106 338 355 44 15 chr20 1146295 1146498 -71007384 + MIR SINE MIR 2 210 -52 952 241 31 0 chr20 1146568 1146796 -71007086 - MIR SINE MIR -26 236 2 2307 89 3 0 chr20 1146817 1147110 -71006772 + AluSp SINE Alu 1 294 -19 3299 93 2 23 chr20 1147116 1147599 -71006283 + L1PA8 LINE L1 5696 6168 -4 801 264 81 4 chr20 1147619 1147854 -71006028 - MIR SINE MIR 0 262 10 192 97 0 0 chr20 1147855 1147886 -71005996 + (ATG)n Simple_repeat Simple_repeat 3 33 0 243 266 0 16 chr20 1147886 1147950 -71005932 + GA-rich Low_complexity Low_complexity 3 65 0 357 223 83 68 chr20 1148128 1148417 -71005465 + MLT1F1 LTR MaLR 185 554 -13 2080 207 154 24 chr20 1149269 1149930 -71003952 - LTR50 LTR ERVL 0 795 49 336 256 107 135 chr20 1150339 1150807 -71003075 - MLT1K LTR MaLR -2 586 132 286 318 9 0 chr20 1151100 1151207 -71002675 - MIR SINE MIR -71 137 30 210 329 40 0 chr20 1151656 1151732 -71002150 + MIR SINE MIR 116 194 -68 2509 173 17 4 chr20 1151743 1152216 -71001666 + Charlie1b DNA MER1_type 45 523 0 1573 149 38 8 chr20 1152291 1152574 -71001308 - AluJo SINE Alu 0 312 36 2338 98 0 7 chr20 1152982 1153288 -71000594 + AluSx SINE Alu 1 304 -8 264 239 14 14 chr20 1154203 1154274 -70999608 + LTR16C LTR ERVL 421 491 0 466 260 27 7 chr20 1154325 1154471 -70999411 - MIR SINE MIR -33 229 81 384 251 64 98 chr20 1155305 1155540 -70998342 + MLT1L LTR MaLR 189 415 -200 4194 90 15 0 chr20 1155664 1156210 -70997672 - MER41A LTR ERV1 0 554 1 484 261 39 20 chr20 1156236 1156389 -70997493 - L2 LINE L2 0 3313 3158 26 23 0 23 chr20 1156429 1156449 -70997433 + AT_rich Low_complexity Low_complexity 1 20 -23 1897 88 0 4 chr20 1156449 1156689 -70997193 + AluSq SINE Alu 1 239 -74 26 23 0 23 chr20 1156689 1156712 -70997170 + AT_rich Low_complexity Low_complexity 20 43 0 415 269 97 7 chr20 1156781 1156926 -70996956 + L1MEd LINE L1 597 754 -5365 1678 148 0 19 chr20 1156980 1157243 -70996639 + AluJo SINE Alu 1 258 -54 2330 122 0 0 chr20 1157315 1157618 -70996264 - AluSq SINE Alu -10 303 1 2017 191 13 64 chr20 1157831 1158301 -70995581 + MER41B LTR ERV1 157 602 -33 314 173 49 12 chr20 1158590 1158671 -70995211 + MIR SINE MIR 36 119 -89 604 247 66 52 chr20 1159143 1159434 -70994448 - MLT1H LTR MaLR -33 376 64 220 283 43 0 chr20 1159709 1159801 -70994081 - MIR SINE MIR -3 259 164 495 278 63 0 chr20 1159801 1159927 -70993955 + MER119 DNA MER1_type 1 134 -449 544 191 63 32 chr20 1159927 1160053 -70993829 + MER119 DNA MER1_type 454 583 0 326 252 36 18 chr20 1160102 1160213 -70993669 - MIR SINE MIR -101 161 49 181 128 43 0 chr20 1160847 1160894 -70992988 + (TA)n Simple_repeat Simple_repeat 2 50 0 42 47 0 24 chr20 1160910 1160953 -70992929 + AT_rich Low_complexity Low_complexity 1 43 -40 1853 153 43 0 chr20 1160953 1161235 -70992647 + AluSx SINE Alu 1 294 -18 42 47 0 24 chr20 1161235 1161276 -70992606 + AT_rich Low_complexity Low_complexity 43 83 0 1101 227 196 44 chr20 1161299 1161708 -70992174 + MLT1J LTR MaLR 1 471 -40 899 268 197 29 chr20 1162432 1162843 -70991039 + LTR16C LTR ERVL 3 482 -9 1191 220 91 49 chr20 1162856 1163143 -70990739 + MLT1A1 LTR MaLR 1 307 -58 1671 194 17 3 chr20 1163143 1163442 -70990440 - AluJo SINE Alu -9 303 1 1191 220 91 49 chr20 1163442 1163504 -70990378 + MLT1A1 LTR MaLR 307 365 0 634 238 94 30 chr20 1164750 1164985 -70988897 + MIR SINE MIR 8 257 -5 2376 107 0 0 chr20 1165265 1165574 -70988308 - AluSq SINE Alu -4 309 1 1561 259 63 11 chr20 1165596 1166059 -70987823 - MLT1J LTR MaLR -18 493 7 2475 60 0 7 chr20 1166149 1166448 -70987434 - AluY SINE Alu -14 297 1 893 245 176 31 chr20 1166568 1167072 -70986810 + MLT1G LTR MaLR 13 590 0 430 111 0 0 chr20 1167783 1167846 -70986036 - L1MC3 LINE L1 -21 7764 7702 269 105 0 0 chr20 1167848 1167886 -70985996 - MSTB LTR MaLR 0 432 395 1671 171 11 7 chr20 1167887 1168162 -70985720 + AluJo SINE Alu 1 276 -36 1164 111 0 0 chr20 1168172 1168245 -70985637 + (GAA)n Simple_repeat Simple_repeat 1 253 0 1164 111 0 0 chr20 1168245 1168425 -70985457 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2186 159 20 30 chr20 1168491 1168894 -70984988 - MSTB LTR MaLR -27 399 1 4008 181 55 49 chr20 1168894 1169714 -70984168 - L1MC3 LINE L1 -81 7909 7095 617 57 52 38 chr20 1169714 1169930 -70983952 + (TG)n Simple_repeat Simple_repeat 1 219 0 4008 181 55 49 chr20 1169930 1170206 -70983676 - L1MC3 LINE L1 -895 7095 6822 252 0 0 0 chr20 1170206 1170234 -70983648 + (TG)n Simple_repeat Simple_repeat 2 29 0 4008 181 55 49 chr20 1170234 1170356 -70983526 - L1MC3 LINE L1 -1168 6822 6496 600 346 42 34 chr20 1170467 1170960 -70982922 + L2 LINE L2 2714 3205 -67 1222 257 81 28 chr20 1170984 1171381 -70982501 - L2 LINE L2 -5 3308 2891 313 287 166 0 chr20 1171377 1171534 -70982348 - MIR SINE MIR -49 213 31 * 286 319 0 0 chr20 1171981 1172053 -70981829 - MER96 DNA MER1_type? -103 72 1 214 284 37 102 chr20 1172125 1172340 -70981542 - L2 LINE L2 -85 3187 2987 207 135 39 58 chr20 1172556 1172608 -70981274 + G-rich Low_complexity Low_complexity 3 53 0 21 36 0 0 chr20 1172668 1172696 -70981186 + GC_rich Low_complexity Low_complexity 1 28 0 247 218 0 39 chr20 1172896 1172974 -70980908 + C-rich Low_complexity Low_complexity 5 79 0 23 0 0 0 chr20 1173187 1173210 -70980672 + GC_rich Low_complexity Low_complexity 1 23 0 363 96 0 0 chr20 1173733 1173785 -70980097 + (TG)n Simple_repeat Simple_repeat 1 52 0 185 0 0 39 chr20 1175005 1175031 -70978851 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 372 22 0 0 chr20 1175054 1175099 -70978783 + (CA)n Simple_repeat Simple_repeat 2 46 0 563 254 75 79 chr20 1175336 1175615 -70978267 - MER102b DNA MER1_type -51 290 13 577 236 93 25 chr20 1176243 1176404 -70977478 - MIR SINE MIR -40 222 51 408 301 68 17 chr20 1176450 1176626 -70977256 - MIR SINE MIR -23 239 55 331 213 27 0 chr20 1178075 1178150 -70975732 + MIR3 SINE MIR 109 185 -23 680 220 38 25 chr20 1180004 1180163 -70973719 + MIR SINE MIR 26 186 -76 1483 291 76 17 chr20 1180215 1180566 -70973316 + L2 LINE L2 2396 2725 -588 445 277 136 0 chr20 1180566 1180721 -70973161 + MER69A DNA AcHobo 1 176 -1 1483 291 76 17 chr20 1180721 1181235 -70972647 + L2 LINE L2 2725 3313 0 206 349 0 0 chr20 1181799 1181862 -70972020 + (CA)n Simple_repeat Simple_repeat 2 64 0 274 256 73 0 chr20 1182148 1182230 -70971652 + MIR SINE MIR 30 117 -91 202 225 303 0 chr20 1182502 1182591 -70971291 + L3 LINE CR1 1347 1462 -115 617 254 57 17 chr20 1183025 1183202 -70970680 + MIR SINE MIR 76 259 -3 230 227 0 15 chr20 1183563 1183629 -70970253 + G-rich Low_complexity Low_complexity 5 69 0 336 254 183 24 chr20 1183675 1183801 -70970081 + MIR SINE MIR 116 261 -1 520 251 133 5 chr20 1184377 1184572 -70969310 - MER102b DNA MER1_type 0 341 122 273 138 292 0 chr20 1184797 1184862 -70969020 - L2 LINE L2 0 3313 3230 201 39 0 0 chr20 1185328 1185354 -70968528 + (CAAAC)n Simple_repeat Simple_repeat 1 26 0 671 202 0 0 chr20 1185391 1185505 -70968377 + FLAM_A SINE Alu 1 114 -19 661 145 34 17 chr20 1185506 1185623 -70968259 + AluJo/FRAM SINE Alu 191 309 -3 758 257 16 5 chr20 1185952 1186139 -70967743 - MIR SINE MIR -21 241 53 234 192 270 11 chr20 1186328 1186425 -70967457 - MIR SINE MIR -9 199 85 262 232 103 3 chr20 1186857 1186957 -70966925 + MIR3 SINE MIR 47 161 -47 182 94 0 31 chr20 1187389 1187421 -70966461 + MIR SINE MIR 43 73 -189 245 301 97 29 chr20 1187794 1187897 -70965985 + MIR SINE MIR 81 190 -72 184 259 74 19 chr20 1188096 1188150 -70965732 + L2 LINE L2 1183 1239 -2075 * 531 169 208 8 chr20 1188120 1188250 -70965632 - MER5A DNA MER1_type -6 183 28 207 268 141 78 chr20 1188291 1188433 -70965449 - MER5A DNA MER1_type -5 184 34 3525 159 70 32 chr20 1190317 1191057 -70962825 + L1MB7 LINE L1 5417 6184 0 201 342 34 43 chr20 1191995 1192112 -70961770 - MIR3 SINE MIR -78 130 15 334 336 60 0 chr20 1192397 1192546 -70961336 - MIR3 SINE MIR -9 199 42 428 257 142 0 chr20 1193479 1193592 -70960290 + MIR SINE MIR 18 146 -116 180 243 0 0 chr20 1193840 1193877 -70960005 + L2 LINE L2 2562 2598 -716 33 25 0 0 chr20 1195471 1195511 -70958371 + AT_rich Low_complexity Low_complexity 1 40 0 588 199 156 7 chr20 1195718 1195859 -70958023 - MER106A DNA MER1_type -74 162 1 24 32 0 0 chr20 1197933 1197964 -70955918 + AT_rich Low_complexity Low_complexity 1 31 0 280 145 24 145 chr20 1198042 1198125 -70955757 + L1ME LINE L1 5805 5877 -244 991 201 72 5 chr20 1198928 1199137 -70954745 + AluJo SINE Alu 1 223 -89 24 0 0 0 chr20 1199177 1199201 -70954681 + AT_rich Low_complexity Low_complexity 1 24 0 1332 106 0 0 chr20 1199312 1199492 -70954390 - AluSg/x SINE Alu -8 304 125 202 211 0 0 chr20 1200114 1200152 -70953730 - L2 LINE L2 -19 3253 3216 6934 47 12 11 chr20 1200196 1201051 -70952831 + HERVL-A1 LTR ERVL 4798 5653 -1 3031 78 34 25 chr20 1201052 1201490 -70952392 + MLT2A1 LTR ERVL 1 442 -2 2903 240 102 26 chr20 1201491 1202693 -70951189 - L1ME LINE L1 -4393 1687 396 447 266 175 7 chr20 1203638 1203781 -70950101 - MER5A DNA MER1_type -1 188 22 413 232 86 78 chr20 1204490 1204721 -70949161 + MLT1E3-int LTR MaLR 1107 1705 -30 631 255 155 33 chr20 1204734 1205173 -70948709 + MLT1E3 LTR MaLR 1 479 -26 514 306 60 28 chr20 1205298 1205546 -70948336 + L1ME LINE L1 5490 5745 -376 695 294 81 20 chr20 1205547 1205843 -70948039 + L2 LINE L2 2445 2758 -556 511 306 48 34 chr20 1206057 1206263 -70947619 + MIR SINE MIR 50 258 -4 560 307 78 10 chr20 1206827 1207035 -70946847 + MIR SINE MIR 41 261 -1 435 307 108 11 chr20 1207044 1207220 -70946662 + MIR SINE MIR 66 258 -4 1249 246 55 37 chr20 1207365 1207853 -70946029 + L1M4 LINE L1 4884 5380 -766 1269 217 84 10 chr20 1207896 1208195 -70945687 + Charlie1a DNA MER1_type 62 382 -1073 1094 155 0 0 chr20 1208195 1208363 -70945519 - AluJb SINE Alu -14 298 131 1561 184 41 0 chr20 1208366 1208637 -70945245 - AluJb SINE Alu -30 282 1 1162 190 55 51 chr20 1208639 1208913 -70944969 + Charlie1a DNA MER1_type 372 646 -809 3224 143 67 24 chr20 1208916 1209586 -70944296 + Charlie1a DNA MER1_type 749 1447 -8 327 340 37 37 chr20 1210953 1211141 -70942741 + MIR SINE MIR 13 200 -62 393 22 0 0 chr20 1211209 1211255 -70942627 + (ATG)n Simple_repeat Simple_repeat 2 47 0 367 308 109 0 chr20 1211555 1211711 -70942171 - MIR SINE MIR -72 190 18 242 341 64 58 chr20 1212839 1213012 -70940870 + L2 LINE L2 2925 3098 -174 260 193 44 114 chr20 1213161 1213207 -70940675 - L1MD2 LINE L1 -3 6356 6308 1762 148 39 0 chr20 1213207 1213491 -70940391 + AluSq SINE Alu 3 297 -16 260 193 44 114 chr20 1213491 1213558 -70940324 - L1MD2 LINE L1 -51 6308 6251 4082 204 54 33 chr20 1213561 1214276 -70939606 - L1MD1 LINE L1 -183 6059 5361 2000 111 10 13 chr20 1214276 1214582 -70939300 - AluSx SINE Alu -7 305 1 4082 204 54 33 chr20 1214582 1215462 -70938420 - L1MD1 LINE L1 -881 5361 4501 5755 30 0 0 chr20 1215462 1216121 -70937761 + L1PA4 LINE L1 5497 6155 0 4082 204 54 33 chr20 1216121 1216145 -70937737 - L1MD1 LINE L1 -1741 4501 4479 180 0 0 0 chr20 1216145 1216165 -70937717 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2074 73 3 31 chr20 1216166 1216454 -70937428 - AluSx SINE Alu -32 280 1 4082 204 54 33 chr20 1216454 1216800 -70937082 - L1MD1 LINE L1 -1762 4480 4050 1972 167 75 29 chr20 1217039 1217493 -70936389 - L1MB8 LINE L1 -1 6177 5703 5144 211 42 42 chr20 1217496 1218624 -70935258 - L1MB8 LINE L1 -740 5434 4307 1741 73 0 0 chr20 1218624 1218843 -70935039 - AluY SINE Alu -8 303 85 5144 211 42 42 chr20 1218843 1219180 -70934702 - L1MB8 LINE L1 -1867 4307 3972 1939 128 16 19 chr20 1219184 1219497 -70934385 - AluSx SINE Alu 0 312 1 1227 186 0 5 chr20 1219542 1219763 -70934119 - AluJb SINE Alu -6 306 87 340 259 47 0 chr20 1219766 1219851 -70934031 - L1MB8 LINE L1 -2185 3961 3873 958 118 31 12 chr20 1219854 1220015 -70933867 - AluSg/x SINE Alu -12 300 137 1370 215 43 7 chr20 1220015 1220317 -70933565 - L1MB8 LINE L1 -2264 3882 3570 1145 235 65 65 chr20 1220332 1220916 -70932966 - L1MC5 LINE L1 -47 7914 7331 307 259 3 3 chr20 1221048 1221152 -70932730 - L1MC5 LINE L1 -644 7228 7061 2057 253 71 25 chr20 1221194 1221940 -70931942 + MER20B DNA MER1_type 4 783 -1 291 306 118 35 chr20 1222045 1222215 -70931667 + MIR3 SINE MIR 18 201 -7 6168 224 69 45 chr20 1223892 1224820 -70929062 + L1MC4a LINE L1 2716 3620 -2526 183 80 0 0 chr20 1224820 1224845 -70929037 + (TA)n Simple_repeat Simple_repeat 1 25 0 6168 224 69 45 chr20 1224845 1225816 -70928066 + L1MC4a LINE L1 3620 4676 -1470 2107 110 0 31 chr20 1225816 1226135 -70927747 + AluSc SINE Alu 1 309 0 6168 224 69 45 chr20 1226135 1226414 -70927468 + L1MC4a LINE L1 4676 4947 -1199 330 217 122 26 chr20 1226903 1227018 -70926864 - MIR SINE MIR -14 248 123 905 149 19 88 chr20 1227538 1227753 -70926129 + AluJo SINE Alu 92 291 -21 446 303 141 43 chr20 1227782 1228044 -70925838 - L2 LINE L2 -209 3063 2739 4074 130 50 14 chr20 1228044 1228758 -70925124 - L1MB3 LINE L1 -3 6180 5441 446 303 141 43 chr20 1228758 1228854 -70925028 - L2 LINE L2 -533 2739 2654 1240 130 236 12 chr20 1229106 1229212 -70924670 + AluSx SINE Alu 1 82 -230 2325 64 6 19 chr20 1229212 1229524 -70924358 + AluY SINE Alu 1 308 -3 1240 130 236 12 chr20 1229524 1229671 -70924211 + AluSx SINE Alu 82 311 -1 1064 278 79 31 chr20 1229682 1230139 -70923743 + L1MC4a LINE L1 6175 6653 -1155 * 1886 176 73 38 chr20 1230120 1230546 -70923336 + L1MC1 LINE L1 5891 6331 -2 588 280 138 53 chr20 1231110 1231493 -70922389 + LTR67 LTR ERVL 45 478 -79 1871 127 0 14 chr20 1231493 1231796 -70922086 - AluSx SINE Alu 0 301 3 588 280 138 53 chr20 1231796 1231883 -70921999 + LTR67 LTR ERVL 478 556 -1 238 316 62 28 chr20 1231886 1232063 -70921819 + L1MC/D LINE L1 5737 5919 -1889 369 312 77 72 chr20 1232093 1232455 -70921427 - L2 LINE L2 -74 3239 2876 325 326 136 13 chr20 1232481 1232717 -70921165 - L1ME LINE L1 -325 5796 5532 553 260 107 17 chr20 1232922 1233099 -70920783 - MIR3 SINE MIR -2 206 14 833 270 167 16 chr20 1233577 1234007 -70919875 - L1ME3A LINE L1 -230 5940 5446 257 237 79 0 chr20 1234231 1234307 -70919575 + L1MC4a LINE L1 5150 5231 -915 375 298 203 27 chr20 1234387 1234826 -70919056 + L1MC4a LINE L1 5317 5832 -1976 1897 127 10 16 chr20 1235791 1236105 -70917777 + AluSx SINE Alu 1 312 0 299 257 37 37 chr20 1236111 1236220 -70917662 - MIR SINE MIR -73 135 27 22 35 0 0 chr20 1237243 1237272 -70916610 + AT_rich Low_complexity Low_complexity 1 29 0 771 224 42 63 chr20 1240057 1240294 -70913588 - MIR SINE MIR 0 262 31 564 265 113 11 chr20 1240296 1240481 -70913401 - MIR SINE MIR -10 252 49 673 274 140 31 chr20 1240550 1240747 -70913135 + L2 LINE L2 2503 2677 -637 2211 102 0 19 chr20 1240747 1241062 -70912820 + AluSx SINE Alu 1 309 -3 673 274 140 31 chr20 1241062 1241215 -70912667 + L2 LINE L2 2677 2891 -423 831 254 5 0 chr20 1241239 1241424 -70912458 + L2 LINE L2 2462 2647 -667 758 256 98 61 chr20 1241429 1241808 -70912074 + L2 LINE L2 2921 3313 0 255 368 52 15 chr20 1241917 1242053 -70911829 - MER5A DNA MER1_type -48 141 1 193 312 75 32 chr20 1242245 1242338 -70911544 - L2 LINE L2 -28 3244 3148 2296 75 7 0 chr20 1242360 1242653 -70911229 + AluSg SINE Alu 1 295 -15 223 282 118 0 chr20 1242668 1242753 -70911129 - L2 LINE L2 -302 2970 2876 725 247 11 11 chr20 1242875 1243053 -70910829 - MER97c DNA MER1_type? -912 178 1 1021 218 37 25 chr20 1243963 1244206 -70909676 - LTR16C LTR ERVL 0 491 246 2486 45 3 6 chr20 1244400 1244711 -70909171 + AluY SINE Alu 1 310 -1 220 262 0 82 chr20 1244784 1244845 -70909037 + L2 LINE L2 3137 3192 -80 432 0 0 0 chr20 1244897 1244945 -70908937 + (TG)n Simple_repeat Simple_repeat 2 49 0 209 260 65 39 chr20 1245255 1245332 -70908550 + L2 LINE L2 2977 3055 -217 253 139 0 0 chr20 1245400 1245436 -70908446 - MER97c DNA MER1_type? -2 1088 1053 1710 82 26 4 chr20 1245468 1245699 -70908183 + AluY SINE Alu 1 236 -75 1824 203 7 59 chr20 1295699 1296138 -70857744 - MER41B LTR ERV1 -63 572 157 1303 231 0 0 chr20 1296355 1296654 -70857228 + AluSq SINE Alu 5 303 -10 1568 148 0 19 chr20 1296726 1296989 -70856893 - AluJo SINE Alu -54 258 1 417 269 97 7 chr20 1297043 1297188 -70856694 - L1MEd LINE L1 -5365 754 597 26 23 0 23 chr20 1297257 1297280 -70856602 + AT_rich Low_complexity Low_complexity 1 24 -19 1803 88 0 4 chr20 1297280 1297520 -70856362 - AluSq SINE Alu -74 239 1 26 23 0 23 chr20 1297520 1297540 -70856342 + AT_rich Low_complexity Low_complexity 24 43 0 551 261 39 20 chr20 1297580 1297733 -70856149 + L2 LINE L2 3158 3313 0 4194 90 15 0 chr20 1297759 1298305 -70855577 + MER41A LTR ERV1 1 554 0 384 251 64 98 chr20 1298429 1298664 -70855218 - MLT1L LTR MaLR -200 415 189 532 260 27 7 chr20 1299498 1299644 -70854238 + MIR SINE MIR 81 229 -33 266 239 14 14 chr20 1299695 1299766 -70854116 - LTR16C LTR ERVL 0 491 421 2190 101 0 7 chr20 1300681 1300987 -70852895 - AluSx SINE Alu -8 304 1 1458 153 38 8 chr20 1301395 1301678 -70852204 + AluJo SINE Alu 36 312 0 2483 173 17 4 chr20 1301753 1302226 -70851656 - Charlie1b DNA MER1_type 0 523 45 244 329 40 0 chr20 1302237 1302313 -70851569 - MIR SINE MIR -68 194 116 320 318 9 0 chr20 1302762 1302869 -70851013 + MIR SINE MIR 30 137 -71 358 259 107 135 chr20 1303162 1303630 -70850252 + MLT1K LTR MaLR 132 586 -2 2111 201 157 27 chr20 1304039 1304700 -70849182 + LTR50 LTR ERVL 49 795 0 364 223 83 68 chr20 1305552 1305841 -70848041 - MLT1G3 LTR MaLR -13 554 185 194 217 0 17 chr20 1306025 1306085 -70847797 + CT-rich Low_complexity Low_complexity 1 59 0 192 97 0 0 chr20 1306083 1306114 -70847768 + (CAT)n Simple_repeat Simple_repeat 3 33 0 * 900 264 81 4 chr20 1306115 1306350 -70847532 + MIR SINE MIR 10 262 0 3273 95 2 23 chr20 1306370 1306853 -70847029 - L1PA8 LINE L1 -4 6168 5696 2180 89 3 0 chr20 1306859 1307152 -70846730 - AluSp SINE Alu -19 294 1 1054 241 31 0 chr20 1307173 1307401 -70846481 + MIR SINE MIR 2 236 -26 417 355 44 15 chr20 1307471 1307674 -70846208 - MIR SINE MIR -52 210 2 1132 191 131 72 chr20 1307991 1308346 -70845536 - MLT1D LTR MaLR -106 399 34 193 304 0 18 chr20 1308507 1308563 -70845319 - MIR SINE MIR -100 162 108 246 265 174 15 chr20 1308811 1308943 -70844939 + MIR SINE MIR 32 184 -78 462 303 8 8 chr20 1309022 1309141 -70844741 - L2 LINE L2 -4 3309 3191 184 222 69 56 chr20 1309159 1309231 -70844651 - L2 LINE L2 0 3313 3241 2392 212 118 20 chr20 1309275 1309962 -70843920 - MER69 DNA AcHobo -2 2524 1757 2996 164 19 47 chr20 1309962 1310535 -70843347 - MER41D LTR ERV1 0 557 1 2392 212 118 20 chr20 1310535 1310592 -70843290 - MER69 DNA AcHobo -769 1757 1707 * 3354 247 70 16 chr20 1310588 1311450 -70842432 - MER69 DNA AcHobo -1614 912 5 228 288 63 54 chr20 1311455 1311566 -70842316 - L2 LINE L2 -469 2845 2734 1555 195 41 61 chr20 1311583 1312347 -70841535 + LTR13 LTR ERVK 1 800 -207 42011 61 9 6 chr20 1312352 1316921 -70836961 + L1PA4 LINE L1 4 4559 -1596 1056 58 32 0 chr20 1316921 1317076 -70836806 + (TTTC)n Simple_repeat Simple_repeat 2 161 0 2283 65 0 0 chr20 1317076 1317355 -70836527 - AluY SINE Alu -32 279 1 42011 61 9 6 chr20 1317355 1318789 -70835093 + L1PA4 LINE L1 4559 6028 -127 2146 81 0 17 chr20 1318789 1319086 -70834796 + AluSp SINE Alu 1 292 -21 42011 61 9 6 chr20 1319086 1319215 -70834667 + L1PA4 LINE L1 6028 6155 0 1411 124 13 13 chr20 1319216 1319442 -70834440 + LTR13 LTR ERVK 782 1007 0 2050 99 7 0 chr20 1319466 1319750 -70834132 - AluSx SINE Alu -26 286 1 505 128 0 26 chr20 1319793 1319871 -70834011 - MER1B DNA MER1_type 0 329 254 1141 131 6 0 chr20 1319872 1320048 -70833834 - MER1B DNA MER1_type -75 222 46 409 252 89 14 chr20 1320063 1320277 -70833605 - L2 LINE L2 -634 2680 2451 360 303 62 51 chr20 1320327 1320505 -70833377 + MIR SINE MIR 35 214 -48 186 43 0 0 chr20 1320733 1320756 -70833126 + (TAA)n Simple_repeat Simple_repeat 1 23 0 548 280 86 5 chr20 1320757 1320943 -70832939 - MIR SINE MIR -8 254 54 180 0 0 0 chr20 1321224 1321244 -70832638 + (CCG)n Simple_repeat Simple_repeat 3 22 0 461 157 5 76 chr20 1321304 1321692 -70832190 + (CCCCG)n Simple_repeat Simple_repeat 1 360 0 234 252 0 73 chr20 1322205 1322328 -70831554 + (CCCCG)n Simple_repeat Simple_repeat 5 118 0 2107 90 0 3 chr20 1322597 1322887 -70830995 - AluSx SINE Alu -23 289 1 338 290 40 0 chr20 1324772 1324872 -70829010 - MIR SINE MIR -17 245 142 499 250 192 0 chr20 1324924 1325080 -70828802 + MIR SINE MIR 64 249 -13 1038 68 0 0 chr20 1325084 1325216 -70828666 + AluSg/x SINE Alu 176 307 -5 217 291 244 0 chr20 1325237 1325323 -70828559 - MIR SINE MIR -136 126 20 315 307 24 24 chr20 1326249 1326376 -70827506 + L2 LINE L2 3179 3305 -8 994 320 109 15 chr20 1326490 1327127 -70826755 - L2 LINE L2 -8 3305 2599 21 71 0 0 chr20 1327323 1327365 -70826517 + AT_rich Low_complexity Low_complexity 1 42 0 2537 253 114 39 chr20 1327509 1328398 -70825484 - L2 LINE L2 0 3313 2493 1568 136 14 188 chr20 1328398 1328840 -70825042 + MLT1A1 LTR MaLR 1 365 0 2537 253 114 39 chr20 1328840 1329157 -70824725 - L2 LINE L2 -820 2493 2201 2075 160 14 17 chr20 1329157 1329519 -70824363 - MLT1A1 LTR MaLR -4 361 1 2537 253 114 39 chr20 1329519 1329611 -70824271 - L2 LINE L2 -1112 2201 1899 296 238 111 63 chr20 1330071 1330197 -70823685 - L2 LINE L2 -13 3300 3169 1728 145 40 27 chr20 1330423 1330720 -70823162 - AluJo SINE Alu -11 301 1 868 181 192 25 chr20 1331041 1331317 -70822565 - MER5C DNA MER1_type -2 322 1 2162 125 0 0 chr20 1331450 1331745 -70822137 - AluSx SINE Alu -17 295 1 198 0 0 0 chr20 1331793 1331815 -70822067 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 193 288 123 34 chr20 1331888 1332034 -70821848 + L2 LINE L2 2606 2764 -550 449 291 37 10 chr20 1332212 1332373 -70821509 + MIR SINE MIR 17 176 -62 625 247 6 25 chr20 1332967 1333129 -70820753 + MIR SINE MIR 2 160 -102 324 255 27 107 chr20 1333544 1333693 -70820189 + MIR3 SINE MIR 69 205 -3 30 0 0 0 chr20 1334267 1334297 -70819585 + AT_rich Low_complexity Low_complexity 1 30 0 2120 134 0 10 chr20 1334491 1334805 -70819077 - AluSx SINE Alu -1 311 1 1745 187 81 49 chr20 1336279 1336749 -70817133 + MER66B LTR ERV1 1 485 -1 1855 174 0 0 chr20 1337913 1338211 -70815671 - AluJb SINE Alu -14 298 1 212 0 36 0 chr20 1338566 1338594 -70815288 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 28 61 0 0 chr20 1340316 1340365 -70813517 + AT_rich Low_complexity Low_complexity 1 49 0 182 323 31 0 chr20 1343129 1343194 -70810688 + L3b LINE CR1 1294 1360 -223 249 33 0 0 chr20 1343725 1343755 -70810127 + (A)n Simple_repeat Simple_repeat 1 30 0 536 289 59 33 chr20 1344730 1345003 -70808879 - HAL1 LINE L1 -3 2504 2225 576 169 136 32 chr20 1345049 1345203 -70808679 - MLT1J LTR MaLR 0 511 342 624 226 167 0 chr20 1345260 1345446 -70808436 - MLT1J LTR MaLR -294 217 1 3205 34 0 0 chr20 1345541 1345924 -70807958 - L1PA5 LINE L1 -2 6152 5770 3481 37 103 0 chr20 1345937 1346393 -70807489 - L1PA5 LINE L1 0 6154 5652 990 252 62 127 chr20 1346520 1347171 -70806711 - HAL1 LINE L1 -568 1939 1293 337 216 0 14 chr20 1347171 1347245 -70806637 - AluJo SINE Alu -164 138 66 990 252 62 127 chr20 1347245 1347499 -70806383 - HAL1 LINE L1 -1214 1293 1024 22 0 0 0 chr20 1347499 1347521 -70806361 + AT_rich Low_complexity Low_complexity 1 22 0 560 213 24 18 chr20 1347529 1347542 -70806340 - L1MA10 LINE L1 -2 6332 6320 557 198 45 86 chr20 1347542 1347764 -70806118 - L1ME1 LINE L1 -5 6161 5949 857 316 47 26 chr20 1347879 1348345 -70805537 - HAL1 LINE L1 -1622 885 410 460 235 203 45 chr20 1348348 1348659 -70805223 - HAL1 LINE L1 -2136 371 12 2163 122 7 0 chr20 1348978 1349281 -70804601 - AluSx SINE Alu -7 305 1 808 173 8 8 chr20 1350349 1350482 -70803400 - FLAM_A SINE Alu 0 133 1 2323 220 44 8 chr20 1351271 1351884 -70801998 - L1ME1 LINE L1 -18 6542 5908 2025 154 68 0 chr20 1351896 1352278 -70801604 - L1MD2 LINE L1 -14 6345 5938 2785 151 37 11 chr20 1352278 1352394 -70801488 - L1MB7 LINE L1 -195 6369 6257 1959 115 0 11 chr20 1352394 1352664 -70801218 - AluSq SINE Alu -45 268 2 2785 151 37 11 chr20 1352664 1353175 -70800707 - L1MB7 LINE L1 -307 6257 4650 1952 213 92 14 chr20 1353179 1353896 -70799986 - L1MB7 LINE L1 -2391 4149 3377 226 194 32 16 chr20 1353897 1353959 -70799923 - L1MB7 LINE L1 -3101 3439 3377 250 253 25 13 chr20 1354008 1354087 -70799795 - L1MB7 LINE L1 -3086 3454 3375 243 247 26 13 chr20 1354134 1354211 -70799671 - L1MB7 LINE L1 -3086 3454 3377 229 260 26 13 chr20 1354386 1354463 -70799419 - L1MB7 LINE L1 -3086 3454 3377 238 234 26 13 chr20 1354583 1354660 -70799222 - L1MB7 LINE L1 -3097 3443 3366 250 253 25 13 chr20 1354761 1354840 -70799042 - L1MB7 LINE L1 -3086 3454 3375 229 260 26 13 chr20 1354824 1354901 -70798981 - L1MB7 LINE L1 -3086 3454 3377 * 238 234 26 13 chr20 1355020 1355097 -70798785 - L1MB7 LINE L1 -3097 3443 3366 243 247 26 13 chr20 1355198 1355275 -70798607 - L1MB7 LINE L1 -3086 3454 3377 243 247 26 13 chr20 1355261 1355338 -70798544 - L1MB7 LINE L1 -3086 3454 3377 * 244 247 26 13 chr20 1355324 1355401 -70798481 - L1MB7 LINE L1 -3086 3454 3377 227 212 30 15 chr20 1355461 1355527 -70798355 - L1MB7 LINE L1 -3097 3443 3377 227 212 30 15 chr20 1355524 1355590 -70798292 - L1MB7 LINE L1 -3097 3443 3377 * 234 221 29 15 chr20 1355587 1355655 -70798227 - L1MB7 LINE L1 -3097 3443 3375 244 217 29 14 chr20 1355960 1356029 -70797853 - L1MB7 LINE L1 -3096 3444 3375 225 260 26 13 chr20 1356013 1356090 -70797792 - L1MB7 LINE L1 -3086 3454 3377 * 887 232 67 20 chr20 1356087 1356384 -70797498 - L1MB7 LINE L1 -3097 3443 3133 2277 137 15 25 chr20 1356384 1356785 -70797097 - Tigger2a DNA MER2_type -36 398 2 2092 214 55 54 chr20 1356788 1357468 -70796414 - L1MB7 LINE L1 -3467 3073 2395 1765 170 6 46 chr20 1357468 1357791 -70796091 - AluSx SINE Alu -2 310 1 2092 214 55 54 chr20 1357791 1358412 -70795470 - L1MB7 LINE L1 -4145 2395 1773 1947 150 7 13 chr20 1358412 1358712 -70795170 - AluJo SINE Alu -14 298 1 2092 214 55 54 chr20 1358712 1358846 -70795036 - L1MB7 LINE L1 -4767 1773 1641 286 293 20 0 chr20 1359333 1359432 -70794450 - L1ME LINE L1 -5923 147 47 765 137 65 0 chr20 1359819 1359943 -70793939 + FLAM_C SINE Alu 1 132 -11 1616 230 180 5 chr20 1360674 1361190 -70792692 - L2 LINE L2 -2 3311 2711 300 356 34 25 chr20 1361248 1361366 -70792516 - MIR SINE MIR -72 136 18 383 205 0 0 chr20 1361655 1361733 -70792149 - MIR3 SINE MIR -50 158 81 261 301 75 68 chr20 1363175 1363321 -70790561 + MIR3 SINE MIR 17 163 -45 465 215 83 56 chr20 1363527 1363671 -70790211 + MIR SINE MIR 96 243 -19 209 270 101 11 chr20 1364322 1364411 -70789471 + L2 LINE L2 3212 3308 -5 215 288 0 17 chr20 1364518 1364577 -70789305 + (TTG)n Simple_repeat Simple_repeat 1 58 0 658 267 6 6 chr20 1364806 1364967 -70788915 + MIR3 SINE MIR 35 195 -13 336 273 118 0 chr20 1365068 1365178 -70788704 - MIR SINE MIR -112 150 28 388 308 70 27 chr20 1365466 1365651 -70788231 - MIR SINE MIR -11 251 59 252 306 107 8 chr20 1365655 1365776 -70788106 + MIR3 SINE MIR 12 144 -64 208 353 43 58 chr20 1365843 1365982 -70787900 - L2 LINE L2 0 3272 3136 21 0 0 0 chr20 1366152 1366173 -70787709 + AT_rich Low_complexity Low_complexity 1 21 0 218 211 19 39 chr20 1366471 1366523 -70787359 - MIR SINE MIR -77 131 81 546 243 95 6 chr20 1366823 1366992 -70786890 + MIR3 SINE MIR 4 187 -21 1958 137 0 0 chr20 1367014 1367291 -70786591 - AluSx SINE Alu -1 311 35 249 271 49 52 chr20 1367857 1368000 -70785882 + MIR SINE MIR 45 185 -35 578 254 123 17 chr20 1368080 1368316 -70785566 - Charlie8 DNA MER1_type -2154 263 3 181 333 16 16 chr20 1369040 1369103 -70784779 - L2 LINE L2 -5 3308 3246 237 188 0 21 chr20 1369127 1369175 -70784707 - L2 LINE L2 -3 3269 3223 234 293 49 12 chr20 1369319 1369401 -70784481 + MIR SINE MIR 152 236 -26 487 309 13 7 chr20 1369514 1369663 -70784219 - MIR SINE MIR -111 151 2 246 287 43 21 chr20 1369763 1369857 -70784025 - MIR SINE MIR -122 140 45 330 276 113 81 chr20 1369885 1370168 -70783714 + L3 LINE CR1 1236 1527 -50 298 301 98 0 chr20 1370841 1370964 -70782918 + MIR SINE MIR 36 170 -92 312 291 102 33 chr20 1371183 1371315 -70782567 - MIR SINE MIR -65 143 4 410 259 11 137 chr20 1372072 1372350 -70781532 + MIR SINE MIR 13 255 -7 385 294 26 46 chr20 1372425 1372578 -70781304 + L3 LINE CR1 1427 1576 -1 276 254 127 0 chr20 1372841 1372951 -70780931 + L2 LINE L2 3188 3311 -2 782 165 2 5 chr20 1373035 1373765 -70780117 + (TG)n Simple_repeat Simple_repeat 1 728 0 684 141 0 32 chr20 1373780 1373965 -70779917 + (TG)n Simple_repeat Simple_repeat 2 180 0 3049 212 67 28 chr20 1374060 1374359 -70779523 - L1ME1 LINE L1 -5 6161 5875 1692 102 0 4 chr20 1374359 1374594 -70779288 - AluSg/x SINE Alu -4 308 75 3049 212 67 28 chr20 1374594 1375208 -70778674 - L1ME1 LINE L1 -291 5875 5201 668 114 0 70 chr20 1375299 1375413 -70778469 - AluJb SINE Alu -8 304 199 196 300 0 0 chr20 1376081 1376141 -70777741 - L2 LINE L2 -285 2987 2928 360 257 48 53 chr20 1376209 1376377 -70777505 - MIR SINE MIR -62 146 3 253 380 44 19 chr20 1376798 1377069 -70776813 + L2 LINE L2 2444 2721 -593 565 298 133 14 chr20 1377807 1378086 -70775796 + L1ME4a LINE L1 5527 5838 -283 284 326 34 48 chr20 1378944 1379091 -70774791 + MIR3 SINE MIR 30 174 -34 529 259 89 49 chr20 1379151 1379375 -70774507 - Charlie8 DNA MER1_type -2184 233 1 1460 259 127 23 chr20 1380026 1380956 -70772926 - L2 LINE L2 -2 3311 2301 470 291 73 68 chr20 1381170 1381404 -70772478 - MIR SINE MIR 0 262 28 2333 82 16 0 chr20 1381498 1381803 -70772079 + AluSg SINE Alu 1 310 0 396 335 30 0 chr20 1383149 1383316 -70770566 + MIR3 SINE MIR 37 208 0 2138 122 0 3 chr20 1384293 1384605 -70769277 - AluSx SINE Alu -1 311 1 405 0 0 0 chr20 1385196 1385241 -70768641 + (CA)n Simple_repeat Simple_repeat 2 46 0 1320 169 73 15 chr20 1385251 1385523 -70768359 + AluJo SINE Alu 5 292 -20 3948 163 30 34 chr20 1385543 1385605 -70768277 - L1MB7 LINE L1 0 6184 6123 2024 116 0 26 chr20 1385605 1385908 -70767974 + AluSx SINE Alu 1 295 -17 3948 163 30 34 chr20 1385908 1386601 -70767281 - L1MB7 LINE L1 -61 6123 5432 196 195 24 0 chr20 1387584 1387625 -70766257 - MIR SINE MIR -57 151 110 254 246 35 0 chr20 1387684 1387741 -70766141 - MIR3 SINE MIR -6 202 144 310 350 148 7 chr20 1388146 1388429 -70765453 + L2 LINE L2 2540 2862 -452 668 246 24 43 chr20 1388668 1388904 -70764978 - MIR SINE MIR -18 244 15 186 231 15 46 chr20 1389801 1389866 -70764016 + MIR SINE MIR 34 96 -166 625 280 30 0 chr20 1390516 1390716 -70763166 + MIR SINE MIR 47 252 -10 281 256 112 8 chr20 1391684 1391809 -70762073 + MIR3 SINE MIR 65 202 -6 190 311 133 22 chr20 1392174 1392309 -70761573 + MIR SINE MIR 67 216 -46 354 211 26 0 chr20 1393052 1393128 -70760754 + MIR SINE MIR 77 154 -108 425 302 149 34 chr20 1393136 1393457 -70760425 - MLT1J LTR MaLR -32 479 122 260 264 69 0 chr20 1393488 1393560 -70760322 - MLT1L LTR MaLR -536 79 3 369 0 0 0 chr20 1394488 1394529 -70759353 + (TG)n Simple_repeat Simple_repeat 2 42 0 232 290 130 29 chr20 1395841 1395979 -70757903 + MIR SINE MIR 81 232 -30 883 194 5 5 chr20 1397196 1397382 -70756500 - L1MB7 LINE L1 0 6184 5999 286 212 12 12 chr20 1397431 1397516 -70756366 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397498 1397583 -70756299 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397565 1397650 -70756232 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397699 1397784 -70756098 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1397766 1397851 -70756031 - L1MB7 LINE L1 -101 6083 5999 * 299 224 12 12 chr20 1397833 1397918 -70755964 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1397900 1397985 -70755897 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1397967 1398052 -70755830 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1398034 1398119 -70755763 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1398101 1398186 -70755696 - L1MB7 LINE L1 -101 6083 5999 * 286 212 12 12 chr20 1398168 1398253 -70755629 - L1MB7 LINE L1 -101 6083 5999 * 809 160 28 28 chr20 1398235 1398416 -70755466 - L1MB7 LINE L1 -101 6083 5903 365 292 65 13 chr20 1398836 1398990 -70754892 + L2 LINE L2 2866 3027 -245 241 163 0 20 chr20 1406423 1406472 -70747410 + G-rich Low_complexity Low_complexity 2 49 0 325 261 0 109 chr20 1407516 1407582 -70746300 - MIR SINE MIR -3 259 210 1855 147 13 7 chr20 1407582 1407881 -70746001 - AluJb SINE Alu -11 301 1 325 261 0 109 chr20 1407881 1407933 -70745949 - MIR SINE MIR -52 210 154 1124 241 20 3 chr20 1409587 1409890 -70743992 + L1MD2 LINE L1 4076 4383 -1763 1930 139 7 7 chr20 1409890 1410244 -70743638 + AluSx SINE Alu 1 354 0 829 144 0 8 chr20 1410293 1410425 -70743457 + FLAM_C SINE Alu 1 131 -2 2058 232 92 12 chr20 1410447 1410930 -70742952 + L1MD2 LINE L1 4387 4948 -1198 1809 149 3 0 chr20 1410930 1411243 -70742639 + AluSx SINE Alu 1 314 0 2058 232 92 12 chr20 1411243 1411479 -70742403 + L1MD2 LINE L1 4948 5164 -982 300 160 120 0 chr20 1411482 1411557 -70742325 + L1MD2 LINE L1 5204 5287 -859 1261 140 4 68 chr20 1411571 1411807 -70742075 + AluJb SINE Alu 85 305 -7 3849 180 44 21 chr20 1411808 1412081 -70741801 + L1MD2 LINE L1 5311 5576 -783 2052 128 0 0 chr20 1412081 1412370 -70741512 - AluJb SINE Alu -21 291 3 3849 180 44 21 chr20 1412370 1412909 -70740973 + L1MD2 LINE L1 5576 6142 -217 465 277 40 0 chr20 1412907 1413055 -70740827 + L1MD3 LINE L1 7832 7985 -10 * 21 0 0 0 chr20 1413066 1413087 -70740795 + AT_rich Low_complexity Low_complexity 1 21 0 1000 230 0 0 chr20 1414523 1414719 -70739163 + MLT1B LTR MaLR 191 386 -4 246 309 39 1 chr20 1415069 1415174 -70738708 - MIR SINE MIR -87 121 16 622 302 95 59 chr20 1417183 1417407 -70736475 + L2 LINE L2 2583 2798 -474 312 315 129 46 chr20 1417407 1417709 -70736173 + MER102a DNA MER1_type 1 327 -3 622 302 95 59 chr20 1417709 1418112 -70735770 + L2 LINE L2 2798 3234 -38 1876 162 3 0 chr20 1418251 1418553 -70735329 - AluJo SINE Alu -9 303 1 582 268 70 29 chr20 1418556 1418799 -70735083 + MER102a DNA MER1_type 59 311 -19 972 203 143 4 chr20 1419330 1419596 -70734286 + MER2 DNA MER2_type 43 345 0 204 185 148 0 chr20 1419667 1419721 -70734161 - L2 LINE L2 -1 3271 3210 287 293 61 100 chr20 1419754 1420034 -70733848 + L2 LINE L2 3004 3272 0 832 234 107 144 chr20 1420044 1420698 -70733184 + MER20B DNA MER1_type 32 661 -122 210 304 121 29 chr20 1421900 1422107 -70731775 + L2 LINE L2 2344 2569 -745 205 239 0 0 chr20 1422352 1422398 -70731484 - L2 LINE L2 -2 3311 3266 295 269 244 0 chr20 1422434 1422553 -70731329 + L2 LINE L2 3165 3312 -1 378 214 50 94 chr20 1423342 1423501 -70730381 + MIR SINE MIR 108 259 -3 755 300 79 30 chr20 1423502 1424094 -70729788 - L2 LINE L2 0 3313 2614 207 330 82 0 chr20 1424263 1424360 -70729522 - MIR SINE MIR -64 144 40 251 122 61 20 chr20 1425170 1425219 -70728663 + L1ME LINE L1 5599 5649 -472 234 257 171 19 chr20 1425458 1425563 -70728319 + L1ME4a LINE L1 5956 6076 -45 249 263 78 67 chr20 1426120 1426299 -70727583 - MIR SINE MIR -12 250 70 1768 183 0 0 chr20 1427177 1427466 -70726416 - AluJb SINE Alu -23 289 1 318 263 58 7 chr20 1427603 1427740 -70726142 - MER117 DNA MER1_type -49 148 5 334 158 149 79 chr20 1427740 1427825 -70726057 + L2 LINE L2 3151 3247 -25 1519 144 16 84 chr20 1427825 1428145 -70725737 - AluJb SINE Alu -14 298 1 334 158 149 79 chr20 1428145 1428173 -70725709 + L2 LINE L2 3247 3272 0 389 269 170 0 chr20 1428264 1428405 -70725477 + MIR SINE MIR 77 241 -21 213 276 52 0 chr20 1428627 1428685 -70725197 - L2 LINE L2 -16 3256 3196 310 193 0 0 chr20 1428854 1428911 -70724971 - MLT1J LTR MaLR -350 161 105 192 245 151 9 chr20 1428928 1429034 -70724848 + MIR3 SINE MIR 52 172 -36 1003 288 93 11 chr20 1429199 1429577 -70724305 - MLT1I LTR MaLR 0 409 1 736 212 74 5 chr20 1429771 1430057 -70723825 + MLT1A1 LTR MaLR 30 365 0 183 100 0 0 chr20 1430741 1430771 -70723111 + (CATGT)n Simple_repeat Simple_repeat 3 32 0 4335 94 3 24 chr20 1430850 1431236 -70722646 + L1PB2 LINE L1 5539 5909 -242 1919 82 0 16 chr20 1431236 1431491 -70722391 - AluSg SINE Alu 0 310 60 4335 94 3 24 chr20 1431491 1431729 -70722153 + L1PB2 LINE L1 5909 6150 -1 200 244 0 0 chr20 1431929 1431974 -70721908 - MIR SINE MIR -65 143 99 185 308 47 9 chr20 1432274 1432381 -70721501 + MIR3 SINE MIR 50 160 -48 560 228 71 3 chr20 1432966 1433151 -70720731 - MIR SINE MIR -7 255 11 219 296 9 70 chr20 1434070 1434185 -70719697 + MIR SINE MIR 22 129 -79 1079 283 106 31 chr20 1434384 1434896 -70718986 + MLT1K LTR MaLR 33 582 -6 1734 151 33 27 chr20 1434983 1435282 -70718600 - AluSx SINE Alu -11 301 1 700 75 32 0 chr20 1435639 1435733 -70718149 - AluS SINE Alu -214 98 2 1997 157 23 0 chr20 1436122 1436427 -70717455 - AluJo SINE Alu 0 312 1 1246 218 127 6 chr20 1436770 1437101 -70716781 - MER97b DNA MER1_type? -663 390 20 186 191 48 0 chr20 1437226 1437268 -70716614 + MIR SINE MIR 80 123 -139 231 36 0 0 chr20 1437830 1437858 -70716024 + (CA)n Simple_repeat Simple_repeat 1 28 0 190 231 115 0 chr20 1438521 1438573 -70715309 + L2 LINE L2 3189 3246 -67 2322 75 0 3 chr20 1438649 1438941 -70714941 + AluSq SINE Alu 1 291 -22 1978 164 0 0 chr20 1439006 1439310 -70714572 + AluJb SINE Alu 1 304 -8 202 231 0 0 chr20 1439375 1439414 -70714468 + MER91 DNA MER1_type 6 44 -96 3083 57 16 0 chr20 1439429 1439800 -70714082 - MER51B LTR ERV1 0 377 1 502 244 44 19 chr20 1439814 1439974 -70713908 + L1ME LINE L1 5566 5729 -392 30 27 0 0 chr20 1440304 1440341 -70713541 + AT_rich Low_complexity Low_complexity 1 37 0 1433 189 23 8 chr20 1440704 1440969 -70712913 + MLT1F LTR MaLR 1 269 -273 6034 194 40 17 chr20 1441102 1443507 -70710375 - L1MC2 LINE L1 -146 6592 4136 14842 143 43 42 chr20 1443517 1445605 -70708277 - L1MA3 LINE L1 -10 7714 5630 180 0 0 0 chr20 1445605 1445625 -70708257 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 14842 143 43 42 chr20 1445625 1446008 -70707874 - L1MA3 LINE L1 -2094 5630 5249 1454 108 10 20 chr20 1446008 1446212 -70707670 - AluSq SINE Alu -24 289 88 14842 143 43 42 chr20 1446212 1447828 -70706054 - L1MA3 LINE L1 -2475 5249 3636 1196 55 0 22 chr20 1447828 1448010 -70705872 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1908 151 7 10 chr20 1448012 1448311 -70705571 - AluSx SINE Alu -14 298 1 14842 143 43 42 chr20 1448311 1448866 -70705016 - L1MA3 LINE L1 -4088 3636 3083 1646 179 29 0 chr20 1448866 1449146 -70704736 - AluJb SINE Alu -14 298 11 14842 143 43 42 chr20 1449146 1451453 -70702429 - L1MA3 LINE L1 -4641 3083 9 1057 244 7 21 chr20 1451452 1451731 -70702151 - L1MC2 LINE L1 -2391 4149 3875 * 1530 194 27 36 chr20 1451773 1452138 -70701744 - L1MC2 LINE L1 -3333 3207 2846 1088 209 24 91 chr20 1452165 1452539 -70701343 - L1MC2 LINE L1 -4887 1653 1305 1833 165 0 16 chr20 1452539 1452855 -70701027 + AluJb SINE Alu 1 311 -1 765 162 0 0 chr20 1452858 1452975 -70700907 + FLAM_C SINE Alu 2 118 -25 25 31 0 0 chr20 1452975 1453007 -70700875 + AT_rich Low_complexity Low_complexity 1 32 0 976 237 70 40 chr20 1453008 1453020 -70700862 - L1MC2 LINE L1 -5228 1315 1305 2433 90 3 3 chr20 1453020 1453330 -70700552 - AluSp SINE Alu -3 310 1 976 237 70 40 chr20 1453330 1453714 -70700168 - L1MC2 LINE L1 -5238 1305 907 257 269 21 32 chr20 1454140 1454233 -70699649 - L1MC2 LINE L1 -6098 442 351 681 67 0 0 chr20 1454242 1454332 -70699550 + AluSg/x SINE Alu 211 300 -9 990 278 24 7 chr20 1454347 1454642 -70699240 - L1MC2 LINE L1 -6207 333 34 1404 199 36 48 chr20 1454680 1454956 -70698926 - L1ME1 LINE L1 -6 6160 5887 2393 85 0 0 chr20 1454956 1455249 -70698633 + AluSc SINE Alu 1 293 -16 1404 199 36 48 chr20 1455249 1455328 -70698554 - L1ME1 LINE L1 -279 5887 5809 1500 170 8 133 chr20 1455989 1456365 -70697517 + MER7A DNA MER2_type 1 327 -19 688 137 103 57 chr20 1456728 1456903 -70696979 + Charlie1 DNA MER1_type 2382 2564 -197 1037 214 47 85 chr20 1456904 1457269 -70696613 + HAL1 LINE L1 1297 1647 -860 1125 237 21 21 chr20 1457282 1457565 -70696317 + MLT1H LTR MaLR 15 297 -252 201 162 0 0 chr20 1457885 1457922 -70695960 + A-rich Low_complexity Low_complexity 1 37 0 222 262 84 9 chr20 1458105 1458212 -70695670 + L2 LINE L2 2538 2652 -662 544 209 368 19 chr20 1458226 1458585 -70695297 - MLT1H1 LTR MaLR 0 555 72 841 128 8 0 chr20 1458667 1458784 -70695098 + AluJb SINE Alu 169 286 -26 193 296 37 46 chr20 1459034 1459142 -70694740 + L2 LINE L2 3160 3266 -47 4829 38 24 2 chr20 1460078 1460656 -70693226 + LTR10C LTR ERV1 1 591 0 291 218 100 45 chr20 1461034 1461144 -70692738 + MLT1L LTR MaLR 43 158 -457 1810 178 65 31 chr20 1461203 1461586 -70692296 - MSTD LTR MaLR 0 396 1 1170 224 50 37 chr20 1461963 1462346 -70691536 + LTR37A LTR ERV1 39 426 0 2230 99 3 0 chr20 1462654 1462947 -70690935 + AluY SINE Alu 4 297 -14 2231 162 84 41 chr20 1462955 1463418 -70690464 - MLT1D LTR MaLR 0 505 23 444 253 48 42 chr20 1463514 1463680 -70690202 + L1ME2 LINE L1 5897 6063 -101 208 196 22 0 chr20 1463775 1463821 -70690061 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 23 78 0 0 chr20 1465346 1465397 -70688485 + AT_rich Low_complexity Low_complexity 1 51 0 762 198 17 17 chr20 1466054 1466226 -70687656 - MER5B DNA MER1_type 0 178 7 334 304 74 0 chr20 1466982 1467117 -70686765 + MIR3 SINE MIR 35 179 -29 1198 301 40 0 chr20 1470110 1470508 -70683374 + L1MC/D LINE L1 5405 5818 -1990 2162 111 0 0 chr20 1470519 1470798 -70683084 - AluSq SINE Alu -13 300 22 604 90 0 0 chr20 1470798 1470876 -70683006 - AluS SINE Alu -234 79 2 256 93 5 43 chr20 1472314 1472364 -70681518 - MIR SINE MIR -62 146 101 26 64 0 0 chr20 1472377 1472424 -70681458 + AT_rich Low_complexity Low_complexity 1 47 0 297 268 105 65 chr20 1473759 1473912 -70679970 + MLT1L LTR MaLR 240 398 -217 2450 133 13 5 chr20 1474005 1474388 -70679494 + L1MC1 LINE L1 5939 6324 -9 383 239 0 34 chr20 1474675 1474763 -70679119 + MER112 DNA MER1_type 168 252 -8 189 0 0 0 chr20 1475034 1475055 -70678827 + (CTG)n Simple_repeat Simple_repeat 1 21 0 231 272 61 35 chr20 1475785 1475899 -70677983 + L1MEc LINE L1 89 205 -6191 2650 217 43 2 chr20 1475917 1476520 -70677362 + L1MEc LINE L1 297 924 -5472 293 143 0 18 chr20 1476531 1476587 -70677295 + L1MEc LINE L1 1027 1081 -5315 * 2895 205 79 12 chr20 1476579 1477621 -70676261 + L1ME1 LINE L1 4916 6015 -151 1227 143 52 149 chr20 1479207 1479536 -70674346 + AluJo SINE Alu 1 297 -5 2034 113 3 3 chr20 1480790 1481090 -70672792 + AluSx SINE Alu 1 300 -12 1088 286 134 24 chr20 1481187 1481803 -70672079 + L2 LINE L2 2611 3304 -9 283 328 139 46 chr20 1482065 1482431 -70671451 - L2 LINE L2 -3 3269 2870 214 250 0 0 chr20 1482588 1482640 -70671242 + A-rich Low_complexity Low_complexity 4 55 0 273 62 42 0 chr20 1482852 1482900 -70670982 + L1MB8 LINE L1 6124 6173 -5 519 231 127 0 chr20 1482923 1483096 -70670786 + L1MC4 LINE L1 6741 7011 -827 1511 144 41 14 chr20 1483246 1483537 -70670345 + AluJb SINE Alu 1 299 -13 465 258 65 31 chr20 1483573 1483802 -70670080 + L1MC4 LINE L1 7112 7348 -694 304 248 155 8 chr20 1483937 1484066 -70669816 + L1MC4 LINE L1 7492 7639 -403 245 293 57 57 chr20 1484162 1484268 -70669614 - MIR SINE MIR -109 153 48 796 291 117 33 chr20 1484358 1484962 -70668920 + L2 LINE L2 2630 3302 -11 211 176 0 0 chr20 1486029 1486063 -70667819 + G-rich Low_complexity Low_complexity 1 34 0 231 218 0 0 chr20 1487413 1487468 -70666414 + GA-rich Low_complexity Low_complexity 3 57 0 201 283 33 0 chr20 1487768 1487828 -70666054 + MIR SINE MIR 128 189 -73 342 253 0 0 chr20 1488178 1488257 -70665625 + MIR SINE MIR 83 161 -101 604 320 48 69 chr20 1489241 1489259 -70664623 - L2 LINE L2 -13 3300 3283 2063 181 81 12 chr20 1489259 1489690 -70664192 + MER65C LTR ERV1 1 461 0 604 320 48 69 chr20 1489690 1490105 -70663777 - L2 LINE L2 -30 3283 2876 1926 138 37 45 chr20 1490138 1490178 -70663704 - THE1C LTR MaLR 0 375 336 2076 121 3 7 chr20 1490178 1490485 -70663397 + AluSx SINE Alu 1 306 -6 1926 138 37 45 chr20 1490485 1490822 -70663060 - THE1C LTR MaLR -39 336 1 282 181 181 43 chr20 1490827 1490921 -70662961 + MLT1G LTR MaLR 1 107 -483 1450 269 54 14 chr20 1490951 1491393 -70662489 - MLT1J LTR MaLR -30 481 22 1267 193 28 44 chr20 1492163 1492484 -70661398 - L1MDa LINE L1 -4865 1675 1360 2686 134 26 16 chr20 1492484 1492909 -70660973 + LTR3 LTR ERVK 1 429 -3 18221 87 44 16 chr20 1492918 1495506 -70658376 + HERVK3 LTR ERVK 2 2661 -4582 462 156 77 0 chr20 1495505 1495622 -70658260 + HERVK3 LTR ERVK 3536 5364 -581 * 2706 76 0 0 chr20 1495618 1495961 -70657921 + HERVK3 LTR ERVK 3965 4307 -2936 * 4695 109 9 0 chr20 1495960 1496628 -70657254 + HERVK3 LTR ERVK 4685 5358 -1885 * 7178 93 6 23 chr20 1496623 1496683 -70657199 + HERVK3 LTR ERVK 6264 6324 -919 2072 108 0 14 chr20 1496683 1497008 -70656874 - AluY SINE Alu 0 311 2 7178 93 6 23 chr20 1497008 1497942 -70655940 + HERVK3 LTR ERVK 6324 7241 -2 2716 144 7 21 chr20 1497943 1498374 -70655508 + LTR3 LTR ERVK 1 425 -7 280 211 9 37 chr20 1498387 1498496 -70655386 - L1MDa LINE L1 -5173 1367 1262 493 191 0 11 chr20 1498498 1498587 -70655295 + AluJ/FLAM SINE Alu 2 89 -223 354 253 13 0 chr20 1499036 1499115 -70654767 - L3 LINE CR1 -107 1470 1391 465 320 163 7 chr20 1499370 1499523 -70654359 + MLT1K LTR MaLR 45 221 -367 1906 176 19 48 chr20 1499523 1499756 -70654126 - MLT1A1 LTR MaLR 0 365 146 2149 83 14 0 chr20 1499756 1500046 -70653836 + AluSp SINE Alu 2 295 -18 1906 176 19 48 chr20 1500046 1500187 -70653695 - MLT1A1 LTR MaLR -219 146 2 435 178 32 189 chr20 1500231 1500417 -70653465 - MLT1A2 LTR MaLR -103 287 122 2089 110 7 0 chr20 1500417 1500718 -70653164 - AluSp SINE Alu -6 307 5 435 178 32 189 chr20 1500718 1500748 -70653134 - MLT1A2 LTR MaLR -268 122 89 2583 105 17 168 chr20 1500748 1501289 -70652593 - LTR32 LTR ERVL 0 471 13 513 189 33 0 chr20 1501287 1501377 -70652505 - MLT1A2 LTR MaLR -281 93 1 * 407 244 81 16 chr20 1501438 1501561 -70652321 + MLT1K LTR MaLR 456 586 -2 963 220 11 0 chr20 1501651 1501828 -70652054 - MER5A DNA MER1_type -4 185 7 223 254 164 0 chr20 1502057 1502124 -70651758 + L2 LINE L2 2740 2817 -497 359 311 92 0 chr20 1502625 1502744 -70651138 - MIR SINE MIR -49 213 84 1608 215 65 71 chr20 1502744 1503252 -70650630 + MLT1D LTR MaLR 1 505 0 1713 236 83 14 chr20 1503703 1504185 -70649697 - REP3 LTR ERV -47 515 1 324 0 0 0 chr20 1504264 1504300 -70649582 + (TG)n Simple_repeat Simple_repeat 2 37 0 1561 183 7 7 chr20 1504303 1504582 -70649300 - AluJb SINE Alu -33 279 1 1108 120 26 26 chr20 1504582 1504773 -70649109 - L1MB3 LINE L1 -40 6143 5953 444 277 177 17 chr20 1505231 1505550 -70648332 + MLT1J LTR MaLR 59 470 -41 208 219 24 0 chr20 1505584 1505625 -70648257 - MIR SINE MIR -139 69 28 221 380 23 8 chr20 1505746 1505875 -70648007 + L2 LINE L2 2582 2712 -602 882 121 109 6 chr20 1506030 1506195 -70647687 - L1M4 LINE L1 -550 5634 5453 292 319 11 0 chr20 1506195 1506286 -70647596 + MLT1L LTR MaLR 218 309 -306 3977 205 30 13 chr20 1506286 1506637 -70647245 + L1M4 LINE L1 3682 4026 -2120 1699 176 0 0 chr20 1506637 1506952 -70646930 + AluJb SINE Alu 1 315 0 3977 205 30 13 chr20 1506952 1507544 -70646338 + L1M4 LINE L1 4026 4642 -1504 757 315 13 4 chr20 1507544 1507782 -70646100 + MER76 LTR ERV 415 654 -34 6903 236 50 28 chr20 1507797 1509066 -70644816 + L1MD2 LINE L1 2160 3399 -2960 2120 103 14 0 chr20 1509066 1509358 -70644524 + AluSx SINE Alu 1 296 -16 6903 236 50 28 chr20 1509358 1511400 -70642482 + L1MD2 LINE L1 3399 6358 -1 280 250 26 0 chr20 1511483 1511559 -70642323 - L2 LINE L2 -741 2573 2496 356 299 212 11 chr20 1511583 1511956 -70641926 + L2 LINE L2 2622 3069 -203 818 273 82 75 chr20 1512067 1512587 -70641295 + L2 LINE L2 2746 3270 -2 527 285 61 6 chr20 1512702 1512867 -70641015 - MIR SINE MIR -70 192 19 298 295 29 9 chr20 1513026 1513131 -70640751 - MIR SINE MIR -73 135 29 310 264 47 19 chr20 1513620 1513726 -70640156 - MIR SINE MIR -84 124 16 956 216 118 146 chr20 1513937 1514498 -70639384 + MLT1K LTR MaLR 35 579 -9 408 322 159 15 chr20 1514605 1515050 -70638832 - L2 LINE L2 -5 3308 2785 3662 111 26 76 chr20 1515123 1515781 -70638101 - L1PA16 LINE L1 -4 6162 5538 2567 168 13 13 chr20 1515866 1516589 -70637293 - L1PA16 LINE L1 -634 5532 4809 890 269 112 30 chr20 1516589 1516990 -70636892 + MLT1J LTR MaLR 59 492 -19 206 222 22 0 chr20 1516993 1517038 -70636844 - L2 LINE L2 -1092 2222 2177 1841 194 58 47 chr20 1517039 1517554 -70636328 + Charlie1b DNA MER1_type 1 521 -2 658 224 33 13 chr20 1518133 1518285 -70635597 - MIR SINE MIR -57 205 51 473 210 60 0 chr20 1518373 1518473 -70635409 - L2 LINE L2 -11 3302 3197 * 907 285 111 18 chr20 1518450 1518839 -70635043 + L2 LINE L2 2889 3313 0 601 236 155 10 chr20 1518978 1519244 -70634638 - L2 LINE L2 -275 2997 2700 717 191 212 7 chr20 1519595 1519813 -70634069 + MER66A LTR ERV1 97 249 -229 895 152 34 22 chr20 1519830 1520008 -70633874 + L1MA9 LINE L1 6133 6312 0 2547 159 18 8 chr20 1520014 1520615 -70633267 - L1MB7 LINE L1 -35 6149 5417 1125 128 0 0 chr20 1520629 1520793 -70633089 + AluSg/x SINE Alu 132 295 -17 696 309 63 19 chr20 1521013 1521330 -70632552 + L2 LINE L2 2839 3169 -144 663 276 122 5 chr20 1521331 1521449 -70632433 + MER8 DNA MER2_type 1 104 -135 1040 173 0 12 chr20 1521449 1521617 -70632265 - FRAM SINE Alu 0 166 1 663 276 122 5 chr20 1521617 1521712 -70632170 + MER8 DNA MER2_type 104 239 0 421 295 124 0 chr20 1521712 1521841 -70632041 + L2 LINE L2 3169 3313 0 455 223 32 0 chr20 1521845 1521939 -70631943 - MIR SINE MIR -70 138 42 198 303 98 25 chr20 1522199 1522321 -70631561 + L3 LINE CR1 1335 1465 -112 334 269 17 17 chr20 1522777 1522896 -70630986 + L1MC/D LINE L1 5313 5431 -2377 338 314 99 42 chr20 1522914 1523197 -70630685 + L1MDa LINE L1 27 325 -6215 925 261 18 65 chr20 1523720 1524061 -70629821 + L1MDa LINE L1 926 1250 -5293 1415 170 63 7 chr20 1524071 1524087 -70629795 - L1MB5 LINE L1 -4 6170 6156 2169 91 0 3 chr20 1524087 1524383 -70629499 + AluSg SINE Alu 1 295 -15 1415 170 63 7 chr20 1524383 1524666 -70629216 - L1MB5 LINE L1 -18 6156 5854 1186 209 129 112 chr20 1524752 1525204 -70628678 - MER77 LTR ERV1 -7 598 134 1430 157 44 27 chr20 1525348 1525557 -70628325 - L1MB5 LINE L1 -315 5859 5642 2531 219 20 34 chr20 1525557 1526119 -70627763 + MLT2B3 LTR ERVL 1 554 0 1430 157 44 27 chr20 1526119 1526203 -70627679 - L1MB5 LINE L1 -532 5642 5561 6119 194 57 44 chr20 1526868 1528779 -70625103 - L1MB5 LINE L1 -591 5583 3633 3184 219 38 60 chr20 1528834 1528915 -70624967 + L1MD2 LINE L1 5255 5336 -1023 2295 84 0 0 chr20 1528915 1529214 -70624668 - AluY SINE Alu -12 299 1 3184 219 38 60 chr20 1529214 1529557 -70624325 + L1MD2 LINE L1 5336 5685 -674 3535 124 13 19 chr20 1529557 1530087 -70623795 + MER1A DNA MER1_type 1 527 0 3184 219 38 60 chr20 1530087 1530572 -70623310 + L1MD2 LINE L1 5685 6145 -214 895 193 164 81 chr20 1530700 1531147 -70622735 + MER66A LTR ERV1 97 478 0 458 288 8 0 chr20 1531158 1531276 -70622606 - MIR SINE MIR -115 147 29 2165 122 0 3 chr20 1532240 1532551 -70621331 + AluSx SINE Alu 2 311 -1 489 277 79 17 chr20 1532584 1532761 -70621121 + MIR SINE MIR 71 258 -4 2000 124 0 0 chr20 1532762 1533086 -70620796 + AluSx SINE Alu 1 324 0 376 224 103 17 chr20 1533093 1533209 -70620673 + L1MC/D LINE L1 5415 5540 -2268 287 220 202 0 chr20 1533220 1533329 -70620553 + L1MC/D LINE L1 5622 5752 -2056 717 185 151 5 chr20 1533425 1533630 -70620252 - HsTC2 DNA Tc2 -7 1891 1657 296 213 38 25 chr20 1533637 1533717 -70620165 - MER104 DNA Tc2 -89 91 11 182 224 118 40 chr20 1534802 1534878 -70619004 + MIR SINE MIR 34 115 -147 458 224 69 9 chr20 1534939 1535055 -70618827 + MIR SINE MIR 119 241 -21 506 288 114 50 chr20 1535074 1535293 -70618589 - MIR SINE MIR -12 250 18 304 302 236 5 chr20 1535447 1535659 -70618223 + MIR SINE MIR 2 262 0 604 291 64 9 chr20 1535999 1536219 -70617663 - L2 LINE L2 -5 3308 3077 307 327 193 15 chr20 1539679 1540121 -70613761 + L2 LINE L2 2656 3200 -72 270 216 0 0 chr20 1540777 1540828 -70613054 + MIR SINE MIR 99 149 -59 387 289 83 0 chr20 1541090 1541211 -70612671 - MIR3 SINE MIR -52 156 26 309 280 60 10 chr20 1541589 1541689 -70612193 - L2 LINE L2 -21 3251 3147 182 308 0 0 chr20 1541756 1541808 -70612074 + MIR SINE MIR 92 143 -119 183 311 67 37 chr20 1542372 1542507 -70611375 + L2 LINE L2 1295 1433 -1881 1424 113 43 43 chr20 1543007 1543237 -70610645 - MER30 DNA MER1_type 0 230 1 344 252 110 24 chr20 1543478 1543605 -70610277 - MIR SINE MIR -11 251 114 372 259 16 0 chr20 1543764 1543853 -70610029 + MIR SINE MIR 58 148 -62 383 291 50 27 chr20 1543931 1544107 -70609775 + MIR SINE MIR 18 208 -54 746 263 65 35 chr20 1544319 1544551 -70609331 - MIR SINE MIR -13 249 11 180 287 244 43 chr20 1544807 1544922 -70608960 + MIR SINE MIR 107 244 -18 307 122 0 0 chr20 1545663 1545712 -70608170 + U5 snRNA snRNA 1 49 -67 366 277 203 16 chr20 1546328 1546644 -70607238 + L1ME4a LINE L1 5531 5905 -216 292 316 64 0 chr20 1547145 1547266 -70606616 + MIR SINE MIR 25 151 -62 654 230 163 15 chr20 1547835 1548031 -70605851 - MIR SINE MIR -17 245 21 349 322 27 4 chr20 1549006 1549119 -70604763 + MIR SINE MIR 2 109 -103 475 292 63 63 chr20 1550141 1550473 -70603409 - MER102b DNA MER1_type -9 332 1 408 336 112 8 chr20 1550871 1551139 -70602743 - L2 LINE L2 -37 3235 2940 182 250 23 0 chr20 1551140 1551184 -70602698 - L2 LINE L2 -1042 2272 2228 346 258 111 79 chr20 1551283 1551473 -70602409 + MIR3 SINE MIR 48 243 -19 581 227 45 0 chr20 1552391 1552545 -70601337 + L1ME4a LINE L1 5589 5749 -372 275 241 134 36 chr20 1552649 1552761 -70601121 + L1ME4a LINE L1 5953 6075 -46 333 313 20 10 chr20 1552888 1552987 -70600895 + L1ME4a LINE L1 5964 6063 -58 2830 176 50 29 chr20 1552990 1553644 -70600238 - L1MA7 LINE L1 -4 6287 5620 1913 148 172 8 chr20 1554833 1555199 -70598683 + MSTA LTR MaLR 1 426 -2 441 299 72 24 chr20 1555708 1555915 -70597967 + MIR SINE MIR 25 241 -21 755 261 22 0 chr20 1555925 1556109 -70597773 + MER5A DNA MER1_type 2 189 0 747 177 165 6 chr20 1556334 1556498 -70597384 + MER3 DNA MER1_type 19 208 -1 219 324 67 9 chr20 1556704 1556809 -70597073 + MIR SINE MIR 95 205 -57 578 171 85 136 chr20 1557380 1557579 -70596303 + MIR SINE MIR 74 262 0 2324 83 0 6 chr20 1558193 1558506 -70595376 - AluY SINE Alu 0 311 1 905 177 66 25 chr20 1558624 1558822 -70595060 - MIR SINE MIR -44 218 13 703 274 68 13 chr20 1560384 1560621 -70593261 - MIR SINE MIR 0 262 13 235 340 85 39 chr20 1560850 1561003 -70592879 - L2 LINE L2 -13 3259 3100 193 185 123 31 chr20 1561069 1561134 -70592748 + MIR3 SINE MIR 95 165 -43 647 244 93 6 chr20 1561275 1561447 -70592435 + MIR SINE MIR 32 218 -44 610 231 208 46 chr20 1561445 1561661 -70592221 + MIR SINE MIR 10 260 -2 * 472 216 88 0 chr20 1561707 1561809 -70592073 - L2 LINE L2 -4 3309 3199 451 258 50 0 chr20 1562866 1562986 -70590896 - L2 LINE L2 0 3313 3188 499 272 65 22 chr20 1563014 1563314 -70590568 + L2 LINE L2 2727 3039 -274 2045 237 16 19 chr20 1563357 1563843 -70590039 + LTR10B LTR ERV1 21 505 0 290 310 23 0 chr20 1563849 1563936 -70589946 + L2 LINE L2 2959 3047 -225 865 267 85 12 chr20 1563965 1564295 -70589587 - MER20B DNA MER1_type -393 390 37 478 251 75 43 chr20 1564568 1564768 -70589114 - MIR SINE MIR -6 256 1 286 303 20 13 chr20 1564975 1565127 -70588755 + C-rich Low_complexity Low_complexity 1 153 0 200 309 37 44 chr20 1565139 1565275 -70588607 + C-rich Low_complexity Low_complexity 3 137 0 256 119 0 0 chr20 1565572 1565614 -70588268 + Alu SINE Alu 259 300 -2 230 225 56 14 chr20 1565753 1565824 -70588058 + L1ME3A LINE L1 5411 5484 -2324 346 186 14 0 chr20 1565824 1565894 -70587988 + LTR60 LTR ERV1 1 71 -515 960 247 44 76 chr20 1566028 1566108 -70587774 + LTR43 LTR ERV1 131 212 -492 2119 117 0 7 chr20 1566108 1566416 -70587466 + AluSg SINE Alu 1 306 -4 960 247 44 76 chr20 1566416 1566811 -70587071 + LTR43 LTR ERV1 212 684 -20 403 292 100 26 chr20 1566824 1567216 -70586666 + L1ME3A LINE L1 5484 5909 -280 579 286 150 18 chr20 1568248 1568475 -70585407 - MIR SINE MIR 0 262 6 927 290 62 31 chr20 1568531 1568917 -70584965 + L2 LINE L2 2892 3289 -24 245 254 127 0 chr20 1568942 1569013 -70584869 - L2 LINE L2 -65 3248 3169 599 216 6 0 chr20 1569027 1569189 -70584693 + (CA)n Simple_repeat Simple_repeat 2 164 0 439 257 104 50 chr20 1569194 1569442 -70584440 - L2 LINE L2 -167 3146 2794 1478 211 109 93 chr20 1569512 1570006 -70583876 - MLT1D LTR MaLR 0 505 4 191 167 83 67 chr20 1570184 1570244 -70583638 + MIR SINE MIR 190 250 -12 2218 90 3 3 chr20 1570258 1570557 -70583325 - AluSq SINE Alu -14 299 1 533 172 60 26 chr20 1570727 1570843 -70583039 - MER20 DNA MER1_type -99 120 1 807 280 64 15 chr20 1570956 1571220 -70582662 + MLT1J LTR MaLR 1 277 -234 348 306 116 7 chr20 1572266 1572413 -70581469 - MIR SINE MIR -65 197 35 350 268 121 56 chr20 1572514 1572712 -70581170 - MIR SINE MIR -31 231 21 258 242 145 73 chr20 1572756 1572880 -70581002 - L3 LINE CR1 -130 1447 1315 346 297 55 0 chr20 1573262 1573353 -70580529 + L2 LINE L2 3169 3264 -8 1992 115 7 0 chr20 1573370 1573657 -70580225 - AluSq SINE Alu -24 289 1 532 272 54 16 chr20 1573697 1573881 -70580001 - L2 LINE L2 -182 3090 2900 208 304 0 39 chr20 1574320 1574422 -70579460 + CT-rich Low_complexity Low_complexity 3 100 0 306 226 154 81 chr20 1574434 1574655 -70579227 - L2 LINE L2 -1 3271 3035 281 372 26 19 chr20 1574725 1574881 -70579001 - MIR SINE MIR -59 203 47 503 265 126 47 chr20 1574990 1575307 -70578575 + MLT1I LTR MaLR 39 380 -29 525 308 110 22 chr20 1575950 1576105 -70577777 - MIR SINE MIR 0 262 79 2300 160 18 5 chr20 1576105 1576488 -70577394 + MLT1B LTR MaLR 3 390 0 525 308 110 22 chr20 1576488 1576559 -70577323 - MIR SINE MIR -183 79 16 224 319 0 0 chr20 1576769 1576841 -70577041 - MIR SINE MIR -59 203 132 911 111 7 22 chr20 1576864 1576999 -70576883 - AluJo/FLAM SINE Alu -169 133 1 250 273 53 68 chr20 1576999 1577131 -70576751 - MIR SINE MIR -111 151 22 465 236 149 6 chr20 1577587 1577748 -70576134 + L1ME1 LINE L1 506 689 -5707 430 226 0 17 chr20 1577757 1577872 -70576010 + L1ME1 LINE L1 1874 1986 -4410 1653 122 86 16 chr20 1577880 1578183 -70575699 - L1MA4A LINE L1 -102 6903 6580 648 158 0 0 chr20 1578183 1578297 -70575585 + CT-rich Low_complexity Low_complexity 3 116 0 637 108 0 0 chr20 1578298 1578381 -70575501 - AluSg/x SINE Alu -59 251 169 3701 123 19 57 chr20 1578383 1578792 -70575090 - L1MA4A LINE L1 -417 6588 6165 2202 121 0 0 chr20 1578792 1579090 -70574792 - AluSx SINE Alu -14 298 1 3701 123 19 57 chr20 1579090 1579656 -70574226 - L1MA4A LINE L1 -840 6165 1728 2984 134 30 44 chr20 1579703 1580565 -70573317 + L1MA4A LINE L1 4795 5643 -660 3254 136 12 4 chr20 1580572 1581078 -70572804 + L1MA4A LINE L1 5794 6303 0 7571 222 65 35 chr20 1581078 1581315 -70572567 + L1ME1 LINE L1 2985 3214 -3021 338 0 24 0 chr20 1581315 1581357 -70572525 + (CA)n Simple_repeat Simple_repeat 2 44 0 7571 222 65 35 chr20 1581357 1581745 -70572137 + L1ME1 LINE L1 3214 3589 -2646 2223 138 0 0 chr20 1581745 1582056 -70571826 - AluSx SINE Alu -1 311 1 7571 222 65 35 chr20 1582056 1583324 -70570558 + L1ME1 LINE L1 3589 4818 -1417 732 178 99 40 chr20 1583324 1583476 -70570406 - FAM SINE Alu -10 165 5 7571 222 65 35 chr20 1583476 1584045 -70569837 + L1ME1 LINE L1 4818 5369 -866 1609 138 0 94 chr20 1584045 1584343 -70569539 + AluJb SINE Alu 25 294 -18 7571 222 65 35 chr20 1584343 1585056 -70568826 + L1ME1 LINE L1 5369 6230 -5 228 250 69 14 chr20 1585418 1585490 -70568392 + MIR SINE MIR 117 192 -70 842 190 80 0 chr20 1585510 1585673 -70568209 - MER45A DNA AcHobo -2 176 1 229 269 19 0 chr20 1585807 1585859 -70568023 + L2 LINE L2 3214 3266 -6 * 234 326 204 8 chr20 1585851 1585983 -70567899 - MIR SINE MIR -28 180 23 421 257 135 14 chr20 1586234 1586382 -70567500 - MIR SINE MIR 0 262 97 868 172 86 6 chr20 1586429 1586592 -70567290 + MER45A DNA AcHobo 1 176 -2 254 300 12 0 chr20 1586616 1586696 -70567186 - MIR SINE MIR -73 189 109 305 333 51 31 chr20 1587329 1587524 -70566358 + MIR SINE MIR 23 221 -41 614 213 16 8 chr20 1587863 1587985 -70565897 + MIR SINE MIR 31 153 -109 1716 234 122 30 chr20 1588554 1589055 -70564827 - MLT1H LTR MaLR 0 549 3 794 175 115 65 chr20 1590639 1590856 -70563026 - L1ME2 LINE L1 -2 6162 5935 * 9231 173 8 3 chr20 1590838 1591948 -70561934 - L1 LINE L1 -1872 5693 4428 2355 94 0 0 chr20 1591948 1592246 -70561636 - AluSx SINE Alu -14 298 1 9231 173 8 3 chr20 1592246 1593051 -70560831 - L1 LINE L1 -3137 4428 3629 1290 117 0 0 chr20 1593051 1593230 -70560652 - AluSg/x SINE Alu 0 310 132 267 158 0 0 chr20 1593230 1593268 -70560614 - Alu SINE Alu -263 39 2 21280 144 27 22 chr20 1593276 1596150 -70557732 - L1 LINE L1 -3933 3632 736 3546 118 28 2 chr20 1596150 1596650 -70557232 + LTR10D LTR ERV1 1 513 0 21280 144 27 22 chr20 1596650 1597370 -70556512 - L1 LINE L1 -6829 736 21 282 206 82 123 chr20 1597368 1597611 -70556271 - L1M4c LINE L1 -3938 2446 2214 * 362 217 60 0 chr20 1597673 1597756 -70556126 - Tigger5 DNA MER2_type -2235 88 1 * 427 210 148 37 chr20 1597756 1597851 -70556031 + Tigger5 DNA MER2_type 2208 2320 -3 1528 230 70 23 chr20 1597854 1598505 -70555377 - L1M4c LINE L1 -4169 2215 1454 790 174 0 0 chr20 1598506 1598621 -70555261 - FRAM SINE Alu -20 156 42 1862 290 25 37 chr20 1598627 1599411 -70554471 - L1M2c LINE L1 -4516 1385 663 314 338 40 18 chr20 1599613 1599814 -70554068 - L1M2c LINE L1 -5189 702 237 207 0 0 0 chr20 1600461 1600484 -70553398 + (TG)n Simple_repeat Simple_repeat 1 23 0 * 303 28 0 0 chr20 1600483 1600519 -70553363 + (GA)n Simple_repeat Simple_repeat 1 36 0 198 320 16 57 chr20 1600586 1600708 -70553174 + MIR3 SINE MIR 15 131 -77 1661 248 84 50 chr20 1601736 1602614 -70551268 - L2 LINE L2 -4 3309 2118 831 273 29 12 chr20 1602560 1602802 -70551080 + MIR SINE MIR 12 257 -5 * 1999 212 111 24 chr20 1602920 1602974 -70550908 - L1MC4 LINE L1 -143 7899 7851 1825 163 18 92 chr20 1602974 1603367 -70550515 + MLT1A1 LTR MaLR 2 365 0 1999 212 111 24 chr20 1603367 1603860 -70550022 - L1MC4 LINE L1 -191 7851 7304 355 254 103 30 chr20 1604314 1604479 -70549403 + MLT1L LTR MaLR 3 179 -436 209 83 28 0 chr20 1604583 1604619 -70549263 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 251 218 0 0 chr20 1604956 1605011 -70548871 - L1MA9 LINE L1 -1 6311 6257 335 95 0 149 chr20 1605932 1606006 -70547876 + L1PA10 LINE L1 6106 6168 0 213 333 8 83 chr20 1606069 1606201 -70547681 + MIR3 SINE MIR 81 202 -6 891 294 74 98 chr20 1606683 1607793 -70546089 + L2 LINE L2 2227 3312 -1 1143 211 28 66 chr20 1608094 1608383 -70545499 - AluJb SINE Alu -25 287 10 425 271 98 0 chr20 1608556 1608587 -70545295 - MER96 DNA MER1_type? -29 146 119 2865 96 11 16 chr20 1608587 1608964 -70544918 - THE1C LTR MaLR 0 375 1 425 271 98 0 chr20 1608964 1609065 -70544817 - MER96 DNA MER1_type? -56 119 1 391 269 221 6 chr20 1609601 1609809 -70544073 + MIR SINE MIR 3 252 -10 202 292 15 15 chr20 1609821 1609886 -70543996 - MIR3 SINE MIR -5 203 139 402 147 0 0 chr20 1610034 1610102 -70543780 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 1332 302 68 0 chr20 1610473 1610956 -70542926 - L1ME3A LINE L1 -295 5875 5350 345 226 69 20 chr20 1611947 1612049 -70541833 + MIR SINE MIR 86 192 -70 435 269 87 13 chr20 1612248 1612397 -70541485 - MIR SINE MIR -97 165 6 401 333 45 50 chr20 1612802 1613024 -70540858 - L2 LINE L2 -42 3230 3010 990 256 190 27 chr20 1613086 1613339 -70540543 + MLT1G1 LTR MaLR 1 212 -378 3131 198 20 0 chr20 1613339 1613885 -70539997 + MER41D LTR ERV1 1 557 0 990 256 190 27 chr20 1613885 1614093 -70539789 + MLT1G1 LTR MaLR 212 521 -69 981 244 92 7 chr20 1614383 1614686 -70539196 + Charlie2 DNA MER1_type 31 359 -2423 1480 216 98 65 chr20 1614692 1615303 -70538579 + Charlie2 DNA MER1_type 2230 2860 -2 655 255 143 50 chr20 1615317 1615701 -70538181 - L2 LINE L2 -526 2788 2369 515 158 42 11 chr20 1615856 1615951 -70537931 + MIR SINE MIR 49 146 -62 1032 315 77 12 chr20 1616545 1617024 -70536858 + L2 LINE L2 2804 3313 0 260 386 31 6 chr20 1617719 1617882 -70536000 + L2 LINE L2 2595 2761 -553 1132 242 52 67 chr20 1617897 1618344 -70535538 - HAL1 LINE L1 -25 2482 2043 1526 122 29 29 chr20 1618357 1618635 -70535247 - L1MA1 LINE L1 0 6302 6025 1669 191 22 38 chr20 1618902 1619268 -70534614 - L1MA9 LINE L1 -38 6274 5915 * 1758 183 3 30 chr20 1619267 1619605 -70534277 + L1MA9 LINE L1 5594 5922 -390 995 242 34 18 chr20 1619565 1619892 -70533990 - L1MC5 LINE L1 -178 7783 7452 * 386 241 23 0 chr20 1619929 1620016 -70533866 + LTR16C LTR ERVL 282 370 -121 23 0 0 0 chr20 1620209 1620232 -70533650 + AT_rich Low_complexity Low_complexity 1 23 0 2499 40 0 10 chr20 1620387 1620683 -70533199 + AluY SINE Alu 1 293 -18 477 0 0 0 chr20 1620683 1620736 -70533146 + (CA)n Simple_repeat Simple_repeat 2 54 0 1804 277 95 8 chr20 1620766 1621395 -70532487 - L1MC4a LINE L1 -1866 6011 5328 740 219 10 86 chr20 1621561 1621853 -70532029 - L1MC4a LINE L1 -1094 5121 4852 25 0 0 0 chr20 1621860 1621885 -70531997 + AT_rich Low_complexity Low_complexity 1 25 0 1336 27 0 0 chr20 1621885 1622033 -70531849 - L1PA4 LINE L1 -3 6152 6005 317 158 18 0 chr20 1622037 1622094 -70531788 - L1MC4a LINE L1 -1353 4862 4805 4500 233 61 45 chr20 1622096 1622837 -70531045 - L1MEc LINE L1 -2426 3789 3061 1895 154 0 3 chr20 1622837 1623122 -70530760 + AluJb SINE Alu 1 284 -28 180 97 0 0 chr20 1623122 1623153 -70530729 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4500 233 61 45 chr20 1623153 1624561 -70529321 - L1MEc LINE L1 -3153 3062 1639 656 108 30 175 chr20 1624571 1624737 -70529145 - L1MB3 LINE L1 -7 6176 6035 575 202 29 0 chr20 1624740 1624844 -70529038 - U6 snRNA snRNA 0 107 1 239 176 39 0 chr20 1624847 1624898 -70528984 + Alu SINE Alu 246 298 -2 3945 251 71 56 chr20 1624901 1625002 -70528880 - L1MEc LINE L1 -1710 4505 4407 2217 123 0 0 chr20 1625002 1625303 -70528579 + AluSq SINE Alu 1 301 -12 3945 251 71 56 chr20 1625303 1625623 -70528259 - L1MEc LINE L1 -1808 4407 4093 2381 70 0 10 chr20 1625623 1625923 -70527959 - AluY SINE Alu -14 297 1 3945 251 71 56 chr20 1625923 1627407 -70526475 - L1MEc LINE L1 -2122 4093 11 283 353 8 16 chr20 1627425 1627547 -70526335 - HAL1 LINE L1 -569 1938 1818 417 287 27 27 chr20 1627656 1627844 -70526038 - HAL1 LINE L1 -900 1607 1420 615 219 7 171 chr20 1628332 1628515 -70525367 - MIR SINE MIR -26 236 111 1907 138 10 17 chr20 1628515 1628811 -70525071 + AluSx SINE Alu 1 294 -18 615 219 7 171 chr20 1628811 1628901 -70524981 - MIR SINE MIR -151 111 8 23 0 0 0 chr20 1630135 1630158 -70523724 + AT_rich Low_complexity Low_complexity 1 23 0 406 277 7 29 chr20 1630185 1630325 -70523557 + L1ME4a LINE L1 5437 5576 -545 522 256 47 33 chr20 1630574 1630789 -70523093 + L1ME4a LINE L1 5609 5826 -295 233 305 44 66 chr20 1630940 1631018 -70522864 + MIR SINE MIR 2 80 -182 2458 142 66 22 chr20 1631018 1631428 -70522454 + MSTC LTR MaLR 1 428 0 233 305 44 66 chr20 1631428 1631575 -70522307 + MIR SINE MIR 80 222 -40 666 280 0 66 chr20 1631889 1632132 -70521750 - MIR SINE MIR -29 233 7 254 28 0 28 chr20 1632355 1632391 -70521491 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1598 247 104 41 chr20 1634113 1634668 -70519214 + MLT1G1 LTR MaLR 3 592 -3 1304 286 46 8 chr20 1634722 1635243 -70518639 - L1M4 LINE L1 -3049 3097 2557 1835 226 85 20 chr20 1635249 1635765 -70518117 + MLT1F1 LTR MaLR 1 567 0 777 250 48 20 chr20 1635795 1636043 -70517839 + MLT1D LTR MaLR 207 461 -44 925 185 20 89 chr20 1636043 1636335 -70517547 - L1MB8 LINE L1 -13 6976 6705 * 31144 101 9 10 chr20 1636329 1642024 -70511858 - L1PA7 LINE L1 -4 6465 748 5495 205 58 34 chr20 1642024 1643111 -70510771 - L1MB8 LINE L1 -276 6719 5660 836 161 0 0 chr20 1643111 1643241 -70510641 - FLAM_C SINE Alu -3 130 1 5495 205 58 34 chr20 1643241 1644541 -70509341 - L1MB8 LINE L1 -1335 5660 4055 1531 229 48 66 chr20 1644560 1645290 -70508592 - L1MB8 LINE L1 -4936 1919 1203 682 246 126 0 chr20 1645291 1645482 -70508400 - L1MB8 LINE L1 -6629 230 16 293 227 0 0 chr20 1645495 1645561 -70508321 + MLT1D LTR MaLR 440 505 0 193 208 56 69 chr20 1645809 1645881 -70508001 + MIR3 SINE MIR 87 157 -51 224 264 240 23 chr20 1646445 1646574 -70507308 + MIR SINE MIR 106 262 0 195 328 153 8 chr20 1647179 1647310 -70506572 + MIR SINE MIR 100 249 -13 26 64 0 0 chr20 1650230 1650277 -70503605 + AT_rich Low_complexity Low_complexity 1 47 0 1099 218 21 0 chr20 1650478 1650712 -70503170 + MER106B DNA MER1_type 1 239 -820 2952 116 50 84 chr20 1650717 1651312 -70502570 + L1MA7 LINE L1 5711 6285 -6 2107 215 151 15 chr20 1651418 1651940 -70501942 - MLT1E LTR MaLR 0 593 1 879 182 27 27 chr20 1651940 1652157 -70501725 + MER106B DNA MER1_type 769 985 -74 1955 201 58 14 chr20 1652158 1652590 -70501292 + MLT1C LTR MaLR 1 451 -16 2100 137 0 9 chr20 1652655 1652970 -70500912 + AluJb SINE Alu 1 312 0 191 354 0 25 chr20 1654692 1654771 -70499111 + MIR SINE MIR 20 96 -166 * 251 314 21 57 chr20 1654770 1654840 -70499042 + L2 LINE L2 2263 2334 -980 2377 99 0 0 chr20 1654840 1655134 -70498748 - AluSq SINE Alu -19 294 1 251 314 21 57 chr20 1655134 1655257 -70498625 + L2 LINE L2 2334 2449 -865 677 160 65 53 chr20 1655290 1655459 -70498423 - LTR45B LTR ERV1 0 489 319 225 282 0 14 chr20 1655529 1655600 -70498282 - MER72 LTR ERV1 -243 479 410 262 337 128 8 chr20 1655814 1656063 -70497819 + L2 LINE L2 2480 2758 -556 1414 267 31 24 chr20 1656162 1656544 -70497338 - LTR16A LTR ERVL 0 450 66 315 98 0 20 chr20 1656951 1657002 -70496880 - L1MC2 LINE L1 -12 6332 6283 4676 153 18 31 chr20 1657002 1657869 -70496013 - L1MC3 LINE L1 -99 7686 6831 262 235 73 0 chr20 1658043 1658111 -70495771 - L2 LINE L2 0 3313 3241 4714 199 47 32 chr20 1658179 1658896 -70494986 + Tigger6a DNA MER2_type 1 706 -891 2317 117 3 0 chr20 1658896 1659204 -70494678 + AluSp SINE Alu 1 309 -4 4714 199 47 32 chr20 1659204 1659228 -70494654 + Tigger6a DNA MER2_type 706 728 -869 1864 131 109 68 chr20 1659228 1659639 -70494243 - MSTA LTR MaLR 0 428 1 4714 199 47 32 chr20 1659639 1659963 -70493919 + Tigger6a DNA MER2_type 728 1083 0 376 288 24 29 chr20 1659986 1660156 -70493726 - L2 LINE L2 -177 3136 2968 256 146 83 0 chr20 1660156 1660204 -70493678 - L2 LINE L2 -580 2734 2683 312 246 14 0 chr20 1660316 1660385 -70493497 - MER63 DNA MER1_type -14 1047 978 534 191 17 26 chr20 1660386 1660501 -70493381 - MER63 DNA MER1_type -311 751 12 183 261 0 0 chr20 1661246 1661292 -70492590 - L2 LINE L2 -6 3266 3221 311 152 139 0 chr20 1662233 1662312 -70491570 - MIR SINE MIR -70 192 103 30 0 0 0 chr20 1662769 1662799 -70491083 + AT_rich Low_complexity Low_complexity 1 30 0 462 313 59 28 chr20 1662860 1663215 -70490667 + LTR16A LTR ERVL 71 436 -14 566 323 98 26 chr20 1663226 1663755 -70490127 + HERV16 LTR ERVL 11 577 -4419 477 276 86 0 chr20 1664167 1664330 -70489552 + L1MDb LINE L1 4 180 -6229 1097 262 34 44 chr20 1664395 1664959 -70488923 + L1M4 LINE L1 3027 3584 -2562 204 283 0 0 chr20 1666982 1667035 -70486847 + MIR SINE MIR 204 256 -6 337 316 59 0 chr20 1667818 1667970 -70485912 - MIR SINE MIR -74 188 28 202 133 0 0 chr20 1669527 1669557 -70484325 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1670109 1670278 -70483604 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1670357 1670589 -70483293 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1670656 1670753 -70483129 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1671538 1671697 -70482185 + MIR3 SINE MIR 12 183 -62 545 245 172 5 chr20 1672058 1672262 -70481620 - MLT1D LTR MaLR -125 380 143 1199 110 18 0 chr20 1672309 1672473 -70481409 + AluSp SINE Alu 1 167 -146 852 244 102 11 chr20 1672491 1672765 -70481117 + L1MC4a LINE L1 5567 5865 -1943 516 242 47 0 chr20 1672991 1673140 -70480742 + MIR3 SINE MIR 45 200 -8 375 278 9 0 chr20 1673523 1673638 -70480244 + L2 LINE L2 3193 3308 -5 367 227 118 0 chr20 1674483 1674593 -70479289 - MIR SINE MIR -38 224 102 1819 176 0 13 chr20 1674630 1674936 -70478946 - AluJb SINE Alu -10 302 1 530 258 111 29 chr20 1675040 1675319 -70478563 + MLT1I LTR MaLR 53 354 -55 538 165 61 0 chr20 1675354 1675469 -70478413 - MLT1D LTR MaLR -6 499 378 745 253 49 67 chr20 1675480 1675824 -70478058 + L1MA9 LINE L1 5939 6276 -36 281 197 154 124 chr20 1675824 1676058 -70477824 - MLT1D LTR MaLR -123 382 142 2888 245 25 27 chr20 1676058 1676955 -70476927 + L1M4c LINE L1 908 1802 -4582 2017 178 93 5 chr20 1676982 1677369 -70476513 - MER88 LTR ERVL -35 429 9 822 201 23 48 chr20 1677599 1677988 -70475894 + HERVL74 LTR ERVL 1997 2450 -3235 507 184 16 48 chr20 1677992 1678117 -70475765 + HERVL74 LTR ERVL 3530 3650 -2035 367 154 26 26 chr20 1678107 1678185 -70475697 + HERVL74 LTR ERVL 3907 3984 -1701 * 990 249 21 7 chr20 1678187 1678468 -70475414 + L1 LINE L1 3724 4008 -2138 323 272 60 60 chr20 1678485 1678669 -70475213 + L2 LINE L2 3130 3313 0 345 273 157 2 chr20 1678925 1679052 -70474830 + MIR SINE MIR 12 156 -52 444 82 0 0 chr20 1679533 1679594 -70474288 + (CTA)n Simple_repeat Simple_repeat 2 62 0 7389 185 27 10 chr20 1679605 1682042 -70471840 + L1MA8 LINE L1 3790 6260 -31 2310 111 0 40 chr20 1682164 1682515 -70471367 + MER1B DNA MER1_type 1 337 0 570 312 34 13 chr20 1682724 1682958 -70470924 + MIR SINE MIR 7 245 -17 2137 158 21 10 chr20 1683258 1683644 -70470238 + MLT1B LTR MaLR 1 390 0 255 281 16 55 chr20 1685558 1685686 -70468196 + MIR SINE MIR 65 187 -75 462 305 0 28 chr20 1686106 1686283 -70467599 - MIR SINE MIR -12 250 79 1810 130 53 56 chr20 1687517 1687850 -70466032 + THE1C LTR MaLR 1 335 -40 2232 99 3 0 chr20 1687850 1688164 -70465718 - AluSx SINE Alu 0 315 1 1810 130 53 56 chr20 1688164 1688205 -70465677 + THE1C LTR MaLR 335 375 0 2206 93 7 0 chr20 1689607 1689911 -70463971 + AluSp SINE Alu 1 306 0 730 274 20 5 chr20 1690317 1690514 -70463368 + MIR SINE MIR 28 227 -35 1683 216 92 0 chr20 1691535 1691924 -70461958 + L1MCa LINE L1 73 497 -5929 1106 229 107 7 chr20 1691924 1692234 -70461648 + Tigger6 DNA MER2_type 1255 1595 -2 185 292 62 0 chr20 1692461 1692574 -70461308 - L2 LINE L2 -661 2653 2534 546 250 48 36 chr20 1692582 1692750 -70461132 - MER63A DNA MER1_type -5 205 36 1933 177 110 3 chr20 1692978 1693368 -70460514 - MSTB1 LTR MaLR 0 432 1 308 200 125 0 chr20 1694897 1694977 -70458905 - MIR SINE MIR -70 192 103 1485 215 122 54 chr20 1695128 1695700 -70458182 + LTR36 LTR ERV1 1 611 0 577 312 60 23 chr20 1696105 1696458 -70457424 + LTR16A LTR ERVL 67 432 -18 462 292 36 18 chr20 1696472 1696640 -70457242 + HERV16 LTR ERVL 11 181 -4815 559 326 52 16 chr20 1696703 1697013 -70456869 + HERV16 LTR ERVL 274 594 -4402 594 241 42 12 chr20 1697405 1697571 -70456311 + L1MDb LINE L1 2 172 -6237 1150 287 24 20 chr20 1697646 1698197 -70455685 + L1M4 LINE L1 3028 3580 -2566 26 74 0 0 chr20 1698273 1698327 -70455555 + AT_rich Low_complexity Low_complexity 1 54 0 223 276 35 0 chr20 1698700 1698758 -70455124 + MER91 DNA MER1_type 131 190 0 202 133 0 0 chr20 1702555 1702585 -70451297 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1703136 1703305 -70450577 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1703384 1703616 -70450266 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1703683 1703780 -70450102 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1704565 1704724 -70449158 + MIR3 SINE MIR 12 183 -62 507 241 177 5 chr20 1705085 1705288 -70448594 - MLT1D LTR MaLR -125 380 143 1100 146 18 0 chr20 1705335 1705499 -70448383 + AluSp SINE Alu 1 167 -146 727 275 99 4 chr20 1705517 1705790 -70448092 + L1MC4a LINE L1 5567 5865 -1943 570 221 47 0 chr20 1706016 1706165 -70447717 + MIR3 SINE MIR 45 200 -8 392 278 9 0 chr20 1706541 1706656 -70447226 + L2 LINE L2 3193 3308 -5 201 203 156 0 chr20 1706718 1706782 -70447100 + MIR3 SINE MIR 85 158 -50 24 32 0 0 chr20 1757607 1757638 -70396244 + AT_rich Low_complexity Low_complexity 1 31 0 396 174 49 125 chr20 1759648 1759792 -70394090 - AluJo SINE Alu -168 134 2 322 161 0 0 chr20 1759868 1759924 -70393958 - Charlie5 DNA MER1_type 0 2624 2569 585 271 181 46 chr20 1760099 1760708 -70393174 + L2 LINE L2 2614 3313 0 300 301 7 44 chr20 1760721 1760857 -70393025 - L2 LINE L2 -3 3310 3180 2181 98 3 0 chr20 1760989 1761286 -70392596 - AluSg SINE Alu -12 298 1 198 176 0 0 chr20 1761735 1761769 -70392113 + L2 LINE L2 3028 3061 -211 399 98 0 0 chr20 1761827 1761888 -70391994 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 291 298 38 38 chr20 1761912 1762043 -70391839 - L2 LINE L2 -68 3245 3115 479 191 9 57 chr20 1762084 1762189 -70391693 + MER3 DNA MER1_type 29 128 -81 230 254 0 18 chr20 1762560 1762615 -70391267 + (TG)n Simple_repeat Simple_repeat 1 54 0 277 291 150 32 chr20 1763221 1763441 -70390441 - L2 LINE L2 -21 3292 3047 201 259 24 59 chr20 1764209 1764294 -70389588 - MIR3 SINE MIR -21 187 106 257 135 19 0 chr20 1764526 1764578 -70389304 + GA-rich Low_complexity Low_complexity 2 54 0 452 259 30 30 chr20 1764619 1764754 -70389128 + MIR SINE MIR 20 154 -108 209 398 31 8 chr20 1764946 1765074 -70388808 + L2 LINE L2 3164 3294 -19 * 264 275 144 64 chr20 1765063 1765299 -70388583 + L3 LINE CR1 1210 1464 -113 1139 276 109 35 chr20 1765395 1766073 -70387809 + L2 LINE L2 2334 3059 -213 728 256 56 40 chr20 1766766 1767016 -70386866 + MIR SINE MIR 9 262 0 475 270 81 0 chr20 1767092 1767203 -70386679 - L2 LINE L2 -2 3311 3192 302 262 47 37 chr20 1767218 1767325 -70386557 - L1MC4 LINE L1 -13 8029 7922 259 167 14 28 chr20 1768295 1768367 -70385515 + CT-rich Low_complexity Low_complexity 6 76 0 352 96 72 36 chr20 1768414 1768497 -70385385 - L1PA13 LINE L1 -4 6159 6074 1486 143 22 0 chr20 1768499 1768817 -70385065 - L1P4 LINE L1 -669 5496 5173 197 295 13 51 chr20 1770006 1770084 -70383798 - MIR SINE MIR -168 94 20 2081 113 7 0 chr20 1770427 1770719 -70383163 - AluSq SINE Alu -19 294 1 366 251 95 56 chr20 1770974 1771140 -70382742 + MIR SINE MIR 16 184 -68 5429 90 5 31 chr20 1771229 1772004 -70381878 + L1PA10 LINE L1 5413 6167 -1 391 244 148 17 chr20 1772147 1772262 -70381620 - MIR SINE MIR -117 145 16 831 208 35 0 chr20 1772357 1772530 -70381352 + MIR SINE MIR 17 195 -67 472 258 12 78 chr20 1773160 1773327 -70380555 + MIR SINE MIR 107 262 0 326 287 139 0 chr20 1773874 1773982 -70379900 - MIR SINE MIR -69 139 17 * 351 301 9 26 chr20 1773947 1774060 -70379822 + MIR SINE MIR 46 156 -106 402 295 59 31 chr20 1774265 1774519 -70379363 - LTR16C LTR ERVL 0 491 231 30 69 0 0 chr20 1775150 1775208 -70378674 + AT_rich Low_complexity Low_complexity 1 58 0 213 314 14 0 chr20 1775325 1775395 -70378487 + MIR SINE MIR 154 224 -38 305 286 11 33 chr20 1775971 1776062 -70377820 - MIR SINE MIR -95 113 25 270 278 100 0 chr20 1776289 1776379 -70377503 + MIR SINE MIR 43 141 -121 1038 88 0 0 chr20 1776554 1776701 -70377181 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 181 313 31 0 chr20 1777293 1777357 -70376525 + L3 LINE CR1 1508 1573 -4 414 273 75 0 chr20 1777645 1777806 -70376076 + MIR SINE MIR 90 262 0 280 262 33 66 chr20 1777847 1777969 -70375913 + MIR SINE MIR 74 191 -71 348 283 106 0 chr20 1778855 1778968 -70374914 + L2 LINE L2 3189 3313 0 302 304 64 21 chr20 1779639 1779919 -70373963 - L1ME3A LINE L1 -214 5956 5665 312 27 0 0 chr20 1780055 1780092 -70373790 + (TA)n Simple_repeat Simple_repeat 1 37 0 227 154 77 0 chr20 1780092 1780144 -70373738 - L1MC4 LINE L1 -1339 6703 6648 5376 184 30 2 chr20 1780634 1782517 -70371365 + L1MA8 LINE L1 4358 6291 0 270 303 0 0 chr20 1782588 1782654 -70371228 + (CATA)n Simple_repeat Simple_repeat 3 68 0 303 180 0 66 chr20 1782659 1782720 -70371162 - L1MC4 LINE L1 -1337 6705 6649 694 261 46 42 chr20 1783005 1783243 -70370639 + MIR SINE MIR 7 245 -17 2225 145 18 8 chr20 1783567 1783953 -70369929 + MLT1B LTR MaLR 1 390 0 221 299 77 8 chr20 1785515 1785632 -70368250 + MIR SINE MIR 91 215 -47 326 343 36 0 chr20 1785861 1786001 -70367881 + MIR SINE MIR 56 200 -62 455 297 84 21 chr20 1786426 1786626 -70367256 - MIR SINE MIR -14 248 36 335 309 44 37 chr20 1786878 1787014 -70366868 + HAL1 LINE L1 881 1017 -1490 2136 161 71 27 chr20 1787138 1787548 -70366334 - MSTA LTR MaLR 0 428 1 8311 172 51 22 chr20 1787566 1788754 -70365128 - MSTA-int LTR MaLR -18 1633 386 1860 130 0 57 chr20 1788754 1789070 -70364812 - AluSg SINE Alu -12 298 1 8311 172 51 22 chr20 1789070 1789467 -70364415 - MSTA-int LTR MaLR -1265 386 2 2379 149 67 5 chr20 1789468 1789871 -70364011 - MSTA LTR MaLR 0 428 1 578 306 78 4 chr20 1790527 1790769 -70363113 + MIR SINE MIR 3 262 0 3308 171 46 5 chr20 1791713 1792322 -70361560 + L1MCa LINE L1 73 706 -5720 3095 236 30 7 chr20 1792329 1793074 -70360808 + Tigger6a DNA MER2_type 322 1083 0 405 296 23 28 chr20 1793091 1793267 -70360615 - L2 LINE L2 -171 3142 2968 261 243 322 0 chr20 1793267 1793419 -70360463 - L2 LINE L2 -580 2734 2534 608 257 50 35 chr20 1793422 1793624 -70360258 - MER63A DNA MER1_type 0 210 6 251 265 112 10 chr20 1795279 1795377 -70358505 - MIR SINE MIR -70 192 85 229 282 39 48 chr20 1795646 1795749 -70358133 - L3 LINE CR1 -4 1573 1472 21 0 0 0 chr20 1795863 1795884 -70357998 + AT_rich Low_complexity Low_complexity 1 21 0 604 307 48 40 chr20 1795931 1796309 -70357573 + LTR16A LTR ERVL 64 444 -6 681 331 96 23 chr20 1796334 1796856 -70357026 + HERV16 LTR ERVL 37 596 -4400 362 290 19 13 chr20 1797294 1797449 -70356433 + L1MDb LINE L1 53 208 -6201 1117 275 38 22 chr20 1797485 1798034 -70355848 + L1M4 LINE L1 3027 3584 -2562 2404 41 7 3 chr20 1798904 1799199 -70354683 - AluY SINE Alu -13 298 3 2528 31 0 0 chr20 1799457 1799751 -70354131 + AluY SINE Alu 2 295 -16 218 171 0 0 chr20 1800460 1800495 -70353387 + L2 LINE L2 3255 3289 -24 197 300 0 0 chr20 1800463 1800513 -70353369 + MIR SINE MIR 213 262 0 * 192 167 0 167 chr20 1800594 1800666 -70353216 + L2 LINE L2 3253 3312 -1 389 292 115 21 chr20 1801260 1801452 -70352430 - MIR SINE MIR -32 230 21 192 281 62 31 chr20 1801675 1801739 -70352143 + MIR SINE MIR 127 192 -70 189 270 0 0 chr20 1803000 1803037 -70350845 + L2 LINE L2 3258 3294 -19 27640 134 14 12 chr20 1803297 1809696 -70344186 - L1PA8 LINE L1 0 6487 4 556 250 24 55 chr20 1809997 1810161 -70343721 + MER5B DNA MER1_type 18 176 -2 772 290 63 8 chr20 1810242 1810480 -70343402 - MIR SINE MIR -4 258 8 303 274 62 26 chr20 1810542 1810655 -70343227 - MIR SINE MIR -78 184 68 247 263 105 44 chr20 1810678 1810792 -70343090 - MIR SINE MIR -44 218 98 2178 86 3 7 chr20 1811328 1811641 -70342241 - AluSp SINE Alu 0 313 1 258 247 27 14 chr20 1811825 1811898 -70341984 + MIR SINE MIR 108 181 -81 687 291 102 4 chr20 1812180 1812445 -70341437 + L1MC4a LINE L1 5567 5857 -1951 444 276 32 73 chr20 1812665 1812829 -70341053 + MIR3 SINE MIR 41 200 -8 402 288 0 9 chr20 1813204 1813315 -70340567 + L2 LINE L2 3193 3302 -11 227 93 23 0 chr20 1813321 1813364 -70340518 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 272 210 129 0 chr20 1813430 1813492 -70340390 + MIR3 SINE MIR 91 160 -48 283 338 29 29 chr20 1813496 1813632 -70340250 + MIR SINE MIR 20 155 -107 381 205 71 18 chr20 1814209 1814321 -70339561 - MIR SINE MIR -37 225 108 1425 214 20 0 chr20 1814321 1814625 -70339257 - AluJb SINE Alu -2 310 1 343 269 86 0 chr20 1814695 1814788 -70339094 - L1MC4 LINE L1 -1342 6700 6600 406 241 151 6 chr20 1814813 1814979 -70338903 - MLT1D LTR MaLR -174 331 142 3042 233 24 31 chr20 1814991 1815880 -70338002 + L1M4c LINE L1 921 1802 -4582 1671 194 19 24 chr20 1815888 1816303 -70337579 - MER88 LTR ERVL -5 459 2 230 254 0 18 chr20 1816464 1816519 -70337363 + (TG)n Simple_repeat Simple_repeat 1 54 0 277 291 150 32 chr20 1817126 1817346 -70336536 - L2 LINE L2 -21 3292 3047 201 259 24 59 chr20 1818114 1818199 -70335683 - MIR3 SINE MIR -21 187 106 257 135 19 0 chr20 1818431 1818483 -70335399 + GA-rich Low_complexity Low_complexity 2 54 0 442 267 30 30 chr20 1818523 1818658 -70335224 + MIR SINE MIR 20 154 -108 209 398 31 8 chr20 1818850 1818978 -70334904 + L2 LINE L2 3164 3294 -19 * 264 275 144 64 chr20 1818967 1819203 -70334679 + L3 LINE CR1 1210 1464 -113 1139 276 109 35 chr20 1819300 1819978 -70333904 + L2 LINE L2 2334 3059 -213 728 256 56 40 chr20 1820671 1820921 -70332961 + MIR SINE MIR 9 262 0 475 270 81 0 chr20 1820997 1821108 -70332774 - L2 LINE L2 -2 3311 3192 302 262 47 37 chr20 1821123 1821230 -70332652 - L1MC4 LINE L1 -13 8029 7922 259 167 14 28 chr20 1822200 1822272 -70331610 + CT-rich Low_complexity Low_complexity 6 76 0 352 96 72 36 chr20 1822319 1822402 -70331480 - L1PA13 LINE L1 -4 6159 6074 1486 143 22 0 chr20 1822404 1822722 -70331160 - L1P4 LINE L1 -669 5496 5173 197 295 13 51 chr20 1823874 1823952 -70329930 - MIR SINE MIR -168 94 20 2081 113 7 0 chr20 1824295 1824587 -70329295 - AluSq SINE Alu -19 294 1 366 251 95 56 chr20 1824842 1825008 -70328874 + MIR SINE MIR 16 184 -68 5429 90 5 31 chr20 1825097 1825872 -70328010 + L1PA10 LINE L1 5413 6167 -1 391 244 148 17 chr20 1826015 1826130 -70327752 - MIR SINE MIR -117 145 16 831 208 35 0 chr20 1826225 1826398 -70327484 + MIR SINE MIR 17 195 -67 472 258 12 78 chr20 1827028 1827195 -70326687 + MIR SINE MIR 107 262 0 326 287 139 0 chr20 1827742 1827850 -70326032 - MIR SINE MIR -69 139 17 * 351 301 9 26 chr20 1827815 1827928 -70325954 + MIR SINE MIR 46 156 -106 439 298 55 31 chr20 1828133 1828388 -70325494 - LTR16C LTR ERVL 0 491 231 30 69 0 0 chr20 1829019 1829077 -70324805 + AT_rich Low_complexity Low_complexity 1 58 0 213 314 14 0 chr20 1829194 1829264 -70324618 + MIR SINE MIR 154 224 -38 305 286 11 33 chr20 1829840 1829931 -70323951 - MIR SINE MIR -95 113 25 270 278 100 0 chr20 1830158 1830248 -70323634 + MIR SINE MIR 43 141 -121 1038 88 0 0 chr20 1830423 1830570 -70323312 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 181 313 31 0 chr20 1831162 1831226 -70322656 + L3 LINE CR1 1508 1573 -4 416 246 26 0 chr20 1831514 1831628 -70322254 + MIR SINE MIR 90 206 -56 261 262 33 66 chr20 1831716 1831838 -70322044 + MIR SINE MIR 74 191 -71 329 303 40 0 chr20 1832738 1832837 -70321045 + L2 LINE L2 3211 3313 0 327 301 60 23 chr20 1833508 1833774 -70320108 - L1ME3A LINE L1 -214 5956 5681 1038 148 0 0 chr20 1833924 1834100 -70319782 + (TA)n Simple_repeat Simple_repeat 1 176 0 349 231 0 22 chr20 1834100 1834206 -70319676 - L1MCa LINE L1 -1339 6983 1996 311 169 46 0 chr20 1834188 1834253 -70319629 - L1MCa LINE L1 -4363 2063 1996 * 861 256 60 34 chr20 1834360 1834711 -70319171 + L1MEc LINE L1 1650 2009 -4387 302 149 95 25 chr20 1834834 1834913 -70318969 + L1 LINE L1 5000 5083 -1063 1049 142 0 7 chr20 1834913 1835068 -70318814 - AluSg/x SINE Alu -30 282 129 4142 139 38 17 chr20 1835301 1835993 -70317889 + Tigger1 DNA MER2_type 18 723 -1695 613 269 114 35 chr20 1836030 1836520 -70317362 - L1M4 LINE L1 -1393 4753 4225 1987 121 80 0 chr20 1836525 1836814 -70317068 - AluSx SINE Alu 0 312 1 781 261 65 50 chr20 1836860 1837243 -70316639 - HAL1 LINE L1 -1 2506 2118 2287 118 0 0 chr20 1837245 1837550 -70316332 - AluSx SINE Alu -7 305 1 3474 194 45 30 chr20 1837611 1838388 -70315494 - L1MD2 LINE L1 -249 6905 6117 3126 192 79 5 chr20 1838388 1839119 -70314763 + MER21B LTR ERV1 1 863 0 3813 216 56 53 chr20 1839119 1839932 -70313950 - L1MD2 LINE L1 -814 6127 5317 3512 138 0 77 chr20 1839932 1840532 -70313350 + MLT2B3 LTR ERVL 1 554 0 3813 216 56 53 chr20 1840532 1840714 -70313168 - L1MD2 LINE L1 -1624 5317 5137 2090 133 0 0 chr20 1840714 1841007 -70312875 + AluSx SINE Alu 1 293 -19 3813 216 56 53 chr20 1841007 1841244 -70312638 - L1MD2 LINE L1 -1804 5137 4891 2445 74 0 7 chr20 1843484 1843783 -70310099 + AluY SINE Alu 1 297 -14 205 237 34 17 chr20 1844184 1844243 -70309639 - MIR3 SINE MIR -19 189 130 448 184 46 55 chr20 1844767 1844876 -70309006 - L1MD2 LINE L1 -2040 4901 4794 11040 151 26 12 chr20 1844887 1846749 -70307133 - L1MA5 LINE L1 -6 6294 4367 234 0 0 0 chr20 1846749 1846775 -70307107 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 11040 151 26 12 chr20 1846775 1847868 -70306014 - L1MA5 LINE L1 -1933 4367 3291 923 213 0 10 chr20 1847870 1848072 -70305810 - L1 LINE L1 -1185 6023 5824 * 1603 176 13 3 chr20 1848062 1848561 -70305321 - L1 LINE L1 -3750 3458 2955 2070 221 5 0 chr20 1848563 1848956 -70304926 - L1 LINE L1 -6814 395 1 612 263 16 10 chr20 1848977 1849171 -70304711 - L1MD2 LINE L1 -2135 4806 4612 550 210 25 68 chr20 1849171 1849217 -70304665 - L1MD2 LINE L1 -3023 3918 3872 2066 138 21 0 chr20 1849217 1849508 -70304374 - AluSx SINE Alu -15 297 1 550 210 25 68 chr20 1849508 1849623 -70304259 - L1MD2 LINE L1 -3069 3872 3764 231 36 0 0 chr20 1849640 1849668 -70304214 + (TG)n Simple_repeat Simple_repeat 2 29 0 783 203 131 16 chr20 1849718 1850029 -70303853 - L1MC/D LINE L1 -492 5686 5412 427 33 33 0 chr20 1850029 1850090 -70303792 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 783 203 131 16 chr20 1850090 1850490 -70303392 - L1MC/D LINE L1 -766 5412 4735 * 2478 161 13 12 chr20 1850486 1851225 -70302657 - L1P4 LINE L1 -505 5660 4924 1029 243 82 57 chr20 1851230 1851633 -70302249 - L1MD2 LINE L1 -5190 1233 821 967 345 50 23 chr20 1851725 1852291 -70301591 - L1MD2 LINE L1 -5826 597 17 718 282 50 0 chr20 1852294 1852496 -70301386 - L2 LINE L2 -772 2542 2331 485 190 0 0 chr20 1853704 1853783 -70300099 + AluJ/FRAM SINE Alu 218 296 -16 1549 231 61 20 chr20 1853987 1854428 -70299454 - L1ME2 LINE L1 -8 6156 5698 22 0 0 0 chr20 1855156 1855178 -70298704 + AT_rich Low_complexity Low_complexity 1 22 0 17925 28 2 0 chr20 1855178 1857942 -70295940 - L1PA2 LINE L1 0 6155 3387 765 183 13 12 chr20 1858457 1858696 -70295186 + GA-rich Low_complexity Low_complexity 1 239 0 246 191 0 0 chr20 1860421 1860468 -70293414 + MER94 DNA DNA 77 123 -11 306 314 39 0 chr20 1860752 1860854 -70293028 - MIR SINE MIR -66 196 91 2095 118 41 54 chr20 1861217 1861553 -70292329 - MSTB1 LTR MaLR -47 385 53 2627 115 25 3 chr20 1861553 1861909 -70291973 - THE1B LTR MaLR 0 364 1 2095 118 41 54 chr20 1861909 1861962 -70291920 - MSTB1 LTR MaLR -379 53 1 343 286 62 36 chr20 1861981 1862173 -70291709 + L1ME LINE L1 5367 5563 -599 2228 106 7 0 chr20 1862332 1862616 -70291266 - AluSx SINE Alu -21 291 6 1246 192 5 5 chr20 1862977 1863201 -70290681 - AluJo SINE Alu -37 275 52 2191 105 9 22 chr20 1863241 1863556 -70290326 + AluY SINE Alu 1 311 0 305 290 140 0 chr20 1863659 1863759 -70290123 - L2 LINE L2 -6 3307 3194 195 333 25 25 chr20 1864117 1864198 -70289684 + L2 LINE L2 3211 3291 -22 734 213 0 0 chr20 1864547 1864674 -70289208 - FLAM_A SINE Alu -5 128 2 216 0 0 0 chr20 1864689 1864713 -70289169 + (CA)n Simple_repeat Simple_repeat 2 25 0 566 116 23 0 chr20 1864717 1864803 -70289079 - L1MC2 LINE L1 -5 6339 6252 663 90 117 9 chr20 1864803 1864914 -70288968 - L1MC1 LINE L1 -217 6116 5994 2163 136 0 0 chr20 1864940 1865250 -70288632 - AluSx SINE Alu -2 310 1 592 68 0 0 chr20 1865251 1865325 -70288557 + MSTA LTR MaLR 355 428 0 266 265 12 36 chr20 1865453 1865536 -70288346 - MER4B-int LTR ERV1 -6064 694 614 1480 217 51 58 chr20 1866091 1866525 -70287357 - LTR56 LTR ERV1 -2 443 13 2530 134 53 14 chr20 1866641 1867074 -70286808 + LTR7 LTR ERV1 1 450 0 9636 184 26 35 chr20 1867074 1870153 -70283729 + HERVH LTR ERV1 1 3245 -3409 2741 166 0 0 chr20 1870132 1870579 -70283303 + HERVH LTR ERV1 3140 3586 -4127 * 6298 131 7 3 chr20 1870578 1871739 -70282143 + HERVH LTR ERV1 3811 4910 -2287 1652 149 8 0 chr20 1871739 1872007 -70281875 + HERVH LTR ERV1 5747 6016 -1697 * 3807 100 11 16 chr20 1872000 1872560 -70281322 + HERVH LTR ERV1 7157 7713 0 2299 121 114 24 chr20 1872560 1872973 -70280909 + LTR7 LTR ERV1 1 450 0 255 61 0 0 chr20 1873075 1873108 -70280774 + (T)n Simple_repeat Simple_repeat 1 33 0 1180 181 0 35 chr20 1873283 1873509 -70280373 - AluJb SINE Alu -9 303 86 2232 157 28 0 chr20 1873899 1874255 -70279627 + MER47A DNA MER2_type 1 366 0 2354 217 22 0 chr20 1874757 1875204 -70278678 + MER88 LTR ERVL 1 457 -7 3634 213 23 36 chr20 1875216 1876077 -70277805 - L1M4c LINE L1 -4583 1801 951 2166 114 0 3 chr20 1876077 1876366 -70277516 - AluSq SINE Alu -25 288 1 3634 213 23 36 chr20 1876366 1876410 -70277472 - L1M4c LINE L1 -5433 951 908 509 235 141 6 chr20 1876410 1876580 -70277302 + MLT1D LTR MaLR 142 334 -171 886 270 55 21 chr20 1876614 1876944 -70276938 - L1MA9 LINE L1 -36 6276 5936 400 264 8 8 chr20 1876952 1877077 -70276805 + MLT1D LTR MaLR 378 502 -3 732 289 88 19 chr20 1877102 1877420 -70276462 - MLT1I LTR MaLR -49 360 21 322 313 97 0 chr20 1877486 1877630 -70276252 + MIR SINE MIR 102 259 -3 223 280 133 0 chr20 1878290 1878365 -70275517 - MIR3 SINE MIR -46 162 78 369 336 0 0 chr20 1878421 1878537 -70275345 - L2 LINE L2 -5 3308 3193 407 296 57 28 chr20 1878910 1879086 -70274796 - MIR3 SINE MIR -10 198 18 188 238 0 0 chr20 1879109 1879151 -70274731 + L2 LINE L2 3263 3304 -9 1958 134 0 0 chr20 1879254 1879565 -70274317 - AluSx SINE Alu 0 319 9 620 261 109 39 chr20 1879592 1879849 -70274033 - L1MC4a LINE L1 -1957 5851 5577 211 287 164 14 chr20 1880131 1880319 -70273563 - MIR SINE MIR -39 223 17 5251 90 24 1 chr20 1880629 1881305 -70272577 + LTR8 LTR ERV1 1 691 0 241 311 67 0 chr20 1881675 1881794 -70272088 + MIR SINE MIR 103 229 -33 260 330 50 0 chr20 1881820 1881920 -70271962 + MIR SINE MIR 80 184 -78 264 245 69 29 chr20 1881974 1882076 -70271806 + MIR SINE MIR 80 185 -77 368 289 22 15 chr20 1882136 1882271 -70271611 + MIR SINE MIR 7 142 -120 14301 192 30 14 chr20 1882280 1886714 -70267168 - L1PBb LINE L1 -913 5949 1446 4281 256 27 20 chr20 1886715 1888925 -70264957 - L1PBa LINE L1 -5219 1644 3 2592 112 16 0 chr20 1889559 1889926 -70263956 + THE1C LTR MaLR 1 373 -2 563 315 68 5 chr20 1889964 1890186 -70263696 + MIR SINE MIR 18 253 -9 23 0 0 0 chr20 1890250 1890273 -70263609 + AT_rich Low_complexity Low_complexity 1 23 0 280 319 43 0 chr20 1890607 1890745 -70263137 - MIR SINE MIR -62 200 57 182 218 127 0 chr20 1891073 1891128 -70262754 - MIR SINE MIR -110 152 91 1773 147 55 50 chr20 1892705 1892806 -70261076 - MLT1B LTR MaLR -8 382 283 2186 103 7 3 chr20 1892806 1893137 -70260745 - AluSx SINE Alu 0 312 1 1773 147 55 50 chr20 1893137 1893415 -70260467 - MLT1B LTR MaLR -107 283 1 331 320 66 17 chr20 1893723 1893904 -70259978 - MIR SINE MIR -17 245 56 1924 143 7 30 chr20 1894109 1894410 -70259472 + AluSx SINE Alu 1 294 -18 240 302 0 0 chr20 1894472 1894535 -70259347 + (TG)n Simple_repeat Simple_repeat 2 64 0 28 71 0 0 chr20 1894554 1894610 -70259272 + AT_rich Low_complexity Low_complexity 1 56 0 6852 190 42 4 chr20 1894632 1897025 -70256857 - L1MA8 LINE L1 -22 6269 3785 486 301 91 32 chr20 1897419 1897638 -70256244 - MIR SINE MIR 0 262 31 375 280 6 57 chr20 1897915 1898090 -70255792 - L2 LINE L2 0 3313 3148 975 209 45 8 chr20 1898106 1898374 -70255508 - L1M4 LINE L1 -2145 4237 3960 367 154 92 0 chr20 1898382 1898447 -70255435 - HERVL74 LTR ERVL -1714 3971 3901 565 149 18 26 chr20 1898448 1898562 -70255320 - HERVL74 LTR ERVL -2044 3641 3529 996 221 8 41 chr20 1898564 1898973 -70254909 - HERVL74 LTR ERVL -1564 1992 1906 2372 195 31 7 chr20 1899185 1899632 -70254250 + MER88 LTR ERVL 2 459 -5 766 81 0 0 chr20 1899643 1899742 -70254140 - AluSc SINE Alu -15 294 196 1787 110 0 4 chr20 1899747 1899983 -70253899 - AluSc SINE Alu -74 235 1 2985 241 43 30 chr20 1899985 1900870 -70253012 - L1M4 LINE L1 -4582 1802 907 968 271 69 10 chr20 1901024 1901124 -70252758 - L1MA9 LINE L1 -46 6266 6173 396 0 0 0 chr20 1901124 1901168 -70252714 + (TG)n Simple_repeat Simple_repeat 2 45 0 968 271 69 10 chr20 1901168 1901373 -70252509 - L1MA9 LINE L1 -139 6173 5943 616 180 25 0 chr20 1901383 1901505 -70252377 + MLT1D LTR MaLR 377 501 -4 676 262 110 38 chr20 1901532 1901799 -70252083 - MLT1I LTR MaLR -49 360 65 2500 75 3 0 chr20 1901799 1902105 -70251777 + AluSp SINE Alu 1 307 -6 676 262 110 38 chr20 1902105 1902154 -70251728 - MLT1I LTR MaLR -344 65 21 381 261 108 0 chr20 1902220 1902350 -70251532 + MIR SINE MIR 102 245 -17 196 368 30 54 chr20 1902893 1903059 -70250823 - MIR3 SINE MIR -45 163 2 279 342 0 33 chr20 1903163 1903283 -70250599 - L2 LINE L2 -5 3308 3193 498 214 91 6 chr20 1903671 1903838 -70250044 - MIR3 SINE MIR -8 200 34 687 297 82 0 chr20 1904043 1904312 -70249570 - L1MC4a LINE L1 -1951 5857 5567 252 253 24 24 chr20 1904611 1904694 -70249188 - MIR SINE MIR -72 190 108 195 197 15 61 chr20 1906274 1906340 -70247542 + L2 LINE L2 2439 2501 -813 597 224 104 27 chr20 1906376 1906559 -70247323 + MER63A DNA MER1_type 14 210 0 1799 200 63 0 chr20 1906895 1907290 -70246592 - Tigger6 DNA MER2_type 0 1597 1178 7210 53 7 0 chr20 1907299 1908628 -70245254 - L1PA7 LINE L1 0 6154 4820 6587 114 48 0 chr20 1908628 1909577 -70244305 - L1P3 LINE L1 -5444 1017 23 451 232 8 16 chr20 1909577 1909702 -70244180 - Tigger6 DNA MER2_type -384 1213 1090 556 296 54 10 chr20 1910028 1910231 -70243651 - MIR SINE MIR -43 219 8 2499 137 62 5 chr20 1910896 1911299 -70242583 + MSTA LTR MaLR 1 426 -2 349 333 14 7 chr20 1911857 1912004 -70241878 + MIR SINE MIR 79 226 -36 297 262 10 10 chr20 1912486 1912582 -70241300 - MIR SINE MIR -62 146 66 2125 164 19 5 chr20 1914581 1914958 -70238924 - MLT1B LTR MaLR -8 382 1 553 283 33 53 chr20 1915283 1915527 -70238355 - MIR SINE MIR -17 245 7 207 232 0 0 chr20 1915763 1915819 -70238063 + (TA)n Simple_repeat Simple_repeat 1 56 0 5548 154 34 13 chr20 1915909 1916227 -70237655 - L1MA8 LINE L1 0 6291 5981 2176 93 0 4 chr20 1916227 1916506 -70237376 - AluSq SINE Alu -15 298 21 5548 154 34 13 chr20 1916506 1917289 -70236593 - L1MA8 LINE L1 -310 5981 5167 1607 204 42 0 chr20 1917330 1917663 -70236219 - L1MA8 LINE L1 -976 5170 4824 1008 229 0 8 chr20 1917662 1917898 -70235984 - L1MA8 LINE L1 -2123 4023 3790 * 1860 162 3 16 chr20 1918348 1918662 -70235220 - AluSx SINE Alu -2 310 1 374 279 90 69 chr20 1918671 1918904 -70234978 - MIR SINE MIR -13 249 12 371 285 16 59 chr20 1919166 1919352 -70234530 - L2 LINE L2 0 3313 3136 826 239 40 0 chr20 1919392 1919668 -70234214 - L1M4 LINE L1 -2135 4247 3961 355 156 26 26 chr20 1919671 1919748 -70234134 - HERVL74 LTR ERVL -1701 3984 3908 437 208 48 32 chr20 1919749 1919874 -70234008 - HERVL74 LTR ERVL -2042 3643 3517 * 750 223 11 17 chr20 1919865 1920040 -70233842 - HERVL74 LTR ERVL -3233 2452 2279 733 213 26 0 chr20 1920097 1920252 -70233630 - HERVL74 LTR ERVL -3530 2155 1997 2291 196 26 18 chr20 1920480 1920934 -70232948 + MER88 LTR ERVL 2 459 -5 450 259 18 0 chr20 1920942 1921054 -70232828 - L1M4 LINE L1 -4582 1802 1689 2413 243 34 32 chr20 1921178 1921948 -70231934 - L1M4 LINE L1 -4706 1678 908 471 228 192 31 chr20 1921949 1922142 -70231740 + MLT1D LTR MaLR 143 366 -139 1037 267 20 26 chr20 1922152 1922497 -70231385 - L1MA9 LINE L1 -34 6278 5936 481 232 16 0 chr20 1922498 1922623 -70231259 + MLT1D LTR MaLR 378 504 -1 737 306 79 6 chr20 1922634 1922951 -70230931 - MLT1I LTR MaLR -49 360 21 339 283 55 28 chr20 1923102 1923247 -70230635 + MIR SINE MIR 102 250 -12 686 284 108 22 chr20 1923719 1923987 -70229895 - L1MC4a LINE L1 -1951 5857 5567 1826 72 0 24 chr20 1924308 1924557 -70229325 - MER75B DNA T2_type 0 243 1 258 108 0 0 chr20 1925312 1925360 -70228522 + MIR SINE MIR 103 143 -65 242 208 50 50 chr20 1925453 1925554 -70228328 + MIR SINE MIR 84 184 -78 518 322 52 4 chr20 1925616 1925849 -70228033 + MIR SINE MIR 8 251 -11 435 278 18 77 chr20 1925937 1926106 -70227776 - MER5B DNA MER1_type -2 176 18 195 216 0 0 chr20 1926731 1926768 -70227114 - L2 LINE L2 -19 3294 3258 207 0 0 0 chr20 1927447 1927470 -70226412 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3584 112 8 4 chr20 1928184 1928693 -70225189 + MER9 LTR ERVK 1 511 0 192 149 0 0 chr20 1929537 1929584 -70224298 + (CTAG)n Simple_repeat Simple_repeat 3 49 0 271 279 15 0 chr20 1931024 1931092 -70222790 - MER91 DNA MER1_type 0 190 122 2098 118 0 4 chr20 1931630 1931909 -70221973 + AluSg SINE Alu 1 278 -32 1005 122 6 17 chr20 1931913 1932095 -70221787 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1282 157 16 48 chr20 1932173 1932224 -70221658 - Tigger3(Golem) DNA MER2_type -3 3035 2984 4078 109 22 12 chr20 1932224 1932820 -70221062 + LTR43 LTR ERV1 1 602 0 1282 157 16 48 chr20 1932820 1933016 -70220866 - Tigger3(Golem) DNA MER2_type -54 2984 2796 1433 183 56 0 chr20 1933026 1933294 -70220588 + AluJb SINE Alu 12 294 -18 3208 125 29 91 chr20 1933303 1933548 -70220334 - Tigger3(Golem) DNA MER2_type -231 2798 2539 1507 181 63 13 chr20 1933548 1933851 -70220031 - 7SLRNA srpRNA srpRNA -1 319 2 3208 125 29 91 chr20 1933851 1934300 -70219582 - Tigger3(Golem) DNA MER2_type -490 2539 2147 321 223 27 18 chr20 1934382 1934494 -70219388 + L1MC/D LINE L1 5319 5431 -2377 383 82 0 0 chr20 1934499 1934548 -70219334 - Tigger3(Golem) DNA MER2_type -870 2159 2111 2385 165 48 10 chr20 1935930 1936342 -70217540 + MSTB1 LTR MaLR 5 432 0 358 289 117 22 chr20 1936466 1936548 -70217334 + L2 LINE L2 2439 2512 -802 580 303 24 14 chr20 1936548 1936756 -70217126 + MER63A DNA MER1_type 1 210 0 358 289 117 22 chr20 1936756 1936853 -70217029 + L2 LINE L2 2512 2635 -679 2362 49 0 23 chr20 1936876 1937180 -70216702 - AluY SINE Alu -14 297 1 281 328 6 71 chr20 1937226 1937409 -70216473 + L2 LINE L2 2968 3138 -175 1331 189 98 7 chr20 1937435 1937742 -70216140 - Tigger6 DNA MER2_type -6 1591 1257 1882 223 47 0 chr20 1937744 1938148 -70215734 - L1MCa LINE L1 -5929 497 75 679 295 29 19 chr20 1939156 1939363 -70214519 - MIR SINE MIR -35 227 19 362 241 58 135 chr20 1939875 1940149 -70213733 - L1MEd LINE L1 -5069 1050 798 654 322 57 12 chr20 1940471 1940716 -70213166 + MIR SINE MIR 6 261 -1 272 346 46 0 chr20 1941138 1941268 -70212614 - MIR SINE MIR -70 192 57 234 277 69 10 chr20 1941517 1941618 -70212264 - MIR SINE MIR -65 197 91 2011 174 23 23 chr20 1942931 1943226 -70210656 - MLT1B LTR MaLR 0 390 93 911 69 76 15 chr20 1943226 1943357 -70210525 - MER85 DNA T2_type 0 139 1 2011 174 23 23 chr20 1943357 1943451 -70210431 - MLT1B LTR MaLR -296 94 1 558 298 56 36 chr20 1943760 1944012 -70209870 - MIR SINE MIR 0 262 6 218 231 15 0 chr20 1944264 1944329 -70209553 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 5661 162 25 6 chr20 1944401 1945951 -70207931 - L1MA8 LINE L1 0 6291 4711 2118 119 0 3 chr20 1945951 1946254 -70207628 - AluSc SINE Alu -7 302 1 5661 162 25 6 chr20 1946254 1946287 -70207595 - L1MA8 LINE L1 -1580 4711 4680 384 259 0 0 chr20 1946284 1946369 -70207513 - L1MA8 LINE L1 -2277 3869 3785 * 686 298 97 9 chr20 1946791 1947019 -70206863 - MIR SINE MIR -3 259 12 408 270 24 66 chr20 1947272 1947483 -70206399 - L2 LINE L2 0 3313 3112 746 236 27 41 chr20 1947488 1947780 -70206102 - L1M4 LINE L1 -2135 4011 3724 378 121 17 0 chr20 1947787 1947845 -70206037 - HERVL74 LTR ERVL -1705 3980 3922 645 232 35 84 chr20 1947973 1948374 -70205508 - HERVL74 LTR ERVL -3233 2452 1997 227 319 0 0 chr20 1948648 1948739 -70205143 - L2 LINE L2 -300 2972 2882 325 211 19 10 chr20 1948766 1948870 -70205012 + (TG)n Simple_repeat Simple_repeat 1 105 0 205 279 16 16 chr20 1948990 1949051 -70204831 - L2 LINE L2 -50 3263 3203 298 74 37 0 chr20 1949367 1949421 -70204461 + (TG)n Simple_repeat Simple_repeat 2 57 0 230 243 14 14 chr20 1949661 1949731 -70204151 - MIR SINE MIR -129 133 64 312 192 100 0 chr20 1950182 1950264 -70203618 - MIR SINE MIR -65 197 105 383 222 69 106 chr20 1950264 1950453 -70203429 + MER5A DNA MER1_type 1 182 -7 480 225 219 25 chr20 1950732 1950892 -70202990 - MIR SINE MIR -70 192 2 517 284 158 2 chr20 1950896 1951115 -70202767 + MIR SINE MIR 13 260 -2 1856 185 95 19 chr20 1951209 1951577 -70202305 - MSTD LTR MaLR 0 396 1 348 257 18 28 chr20 1951950 1952059 -70201823 - MIR SINE MIR -118 144 37 233 245 0 20 chr20 1952073 1952122 -70201760 - L2 LINE L2 -9 3263 3216 319 155 0 17 chr20 1952593 1952651 -70201231 - MIR SINE MIR -105 157 101 1151 243 108 49 chr20 1952956 1953535 -70200347 + L2 LINE L2 2701 3312 -1 290 286 109 8 chr20 1953545 1953664 -70200218 - MIR SINE MIR -65 197 67 491 237 153 6 chr20 1953664 1953841 -70200041 + LTR16A LTR ERVL 16 218 -232 2221 102 8 72 chr20 1953937 1954299 -70199583 + MLT1B LTR MaLR 4 342 -48 306 284 0 0 chr20 1954308 1954389 -70199493 + L2 LINE L2 2743 2823 -491 * 435 305 23 8 chr20 1954376 1954504 -70199378 + L2 LINE L2 3180 3309 -4 608 126 0 0 chr20 1954570 1954660 -70199222 - MLT1C LTR MaLR -46 459 333 2077 131 0 0 chr20 1954692 1955004 -70198878 - AluSx SINE Alu 0 312 1 273 128 0 0 chr20 1955007 1955046 -70198836 + MLT1B LTR MaLR 352 390 0 405 282 43 0 chr20 1955047 1955164 -70198718 - MIR SINE MIR -62 200 79 664 121 17 26 chr20 1955615 1955731 -70198151 - Charlie1 DNA MER1_type -16 2745 2631 1916 139 19 10 chr20 1955738 1956047 -70197835 + AluSx SINE Alu 1 312 0 717 89 32 8 chr20 1956051 1956174 -70197708 + GA-rich Low_complexity Low_complexity 2 127 0 772 242 34 6 chr20 1956201 1956379 -70197503 - MIR SINE MIR -78 184 2 352 313 30 30 chr20 1956960 1957091 -70196791 - L2 LINE L2 -4 3268 3138 180 171 0 73 chr20 1957155 1957196 -70196686 + L2 LINE L2 3271 3308 -5 858 194 191 12 chr20 1957246 1957498 -70196384 - MLT1J2 LTR MaLR 0 450 154 632 207 72 33 chr20 1957701 1957951 -70195931 - MLT1K LTR MaLR -1 587 295 204 168 12 62 chr20 1958018 1958179 -70195703 + (TA)n Simple_repeat Simple_repeat 1 153 0 335 293 130 40 chr20 1959058 1959311 -70194571 - L1ME4a LINE L1 -2 6119 5844 215 294 15 0 chr20 1959311 1959379 -70194503 + L2 LINE L2 3148 3216 -56 332 320 39 8 chr20 1959451 1959579 -70194303 - MIR SINE MIR -46 216 85 802 150 0 0 chr20 1959788 1959921 -70193961 - FRAM SINE Alu -3 173 41 1186 237 49 23 chr20 1960250 1960558 -70193324 + LTR16C LTR ERVL 169 484 -7 629 286 37 86 chr20 1960836 1961185 -70192697 + L2 LINE L2 2922 3253 -19 354 277 34 0 chr20 1962068 1962187 -70191695 + MIR3 SINE MIR 9 131 -77 725 302 35 58 chr20 1962351 1962778 -70191104 + L2 LINE L2 2897 3313 0 191 215 253 0 chr20 1963100 1963179 -70190703 - MIR SINE MIR -1 261 163 * 425 186 144 0 chr20 1963170 1963267 -70190615 + L2 LINE L2 3203 3313 0 * 455 211 79 9 chr20 1963265 1963379 -70190503 - MIR SINE MIR -115 147 26 270 175 68 42 chr20 1964142 1964249 -70189633 + MLT1L LTR MaLR 200 391 -202 356 231 161 46 chr20 1964325 1964455 -70189427 + L2 LINE L2 3163 3307 -6 577 268 95 85 chr20 1964825 1965236 -70188646 - MLT1J LTR MaLR -6 505 91 260 197 66 16 chr20 1965182 1965243 -70188639 - LTR67 LTR ERVL -403 154 91 * 806 285 38 13 chr20 1965399 1965634 -70188248 + MIR SINE MIR 8 248 -14 2628 124 12 19 chr20 1965648 1966074 -70187808 + L1PA13 LINE L1 5737 6159 -4 261 258 124 0 chr20 1966218 1966307 -70187575 + MIR SINE MIR 48 147 -61 311 206 137 0 chr20 1966886 1966959 -70186923 + MIR SINE MIR 64 146 -62 987 205 60 5 chr20 1967233 1967448 -70186434 - MIR SINE MIR 0 262 36 402 308 83 6 chr20 1967507 1967663 -70186219 - L3 LINE CR1 -56 1521 1354 432 232 113 26 chr20 1967852 1968003 -70185879 + MIR SINE MIR 98 261 -1 314 284 71 31 chr20 1968093 1968220 -70185662 - MIR3 SINE MIR -10 198 67 324 253 241 44 chr20 1968551 1968709 -70185173 + MIR3 SINE MIR 2 152 -56 641 169 0 4 chr20 1969469 1969604 -70184278 - MER5A DNA MER1_type 0 189 1 271 259 0 0 chr20 1969639 1969693 -70184189 - L2 LINE L2 -51 3221 3168 504 347 31 5 chr20 1969715 1969911 -70183971 + MIR SINE MIR 4 204 -58 1558 159 14 27 chr20 1969926 1970222 -70183660 + AluJo SINE Alu 1 292 -20 791 296 106 40 chr20 1970346 1970724 -70183158 - L2 LINE L2 0 3313 2911 339 330 35 25 chr20 1970908 1971108 -70182774 + MIR SINE MIR 61 262 0 361 269 82 15 chr20 1971521 1971655 -70182227 - L1ME4a LINE L1 -2 6119 5977 273 252 71 31 chr20 1971728 1971855 -70182027 - L1ME4a LINE L1 -266 5855 5724 915 295 58 42 chr20 1972417 1972899 -70180983 - MLT1L LTR MaLR -79 536 47 324 321 123 43 chr20 1973016 1973365 -70180517 + MLT1K LTR MaLR 179 555 -33 413 267 33 13 chr20 1973421 1973571 -70180311 + MER103 DNA DNA 1 153 -13 470 17 17 0 chr20 1973917 1973976 -70179906 + (CA)n Simple_repeat Simple_repeat 2 61 0 255 283 75 19 chr20 1973979 1974085 -70179797 + L2 LINE L2 3142 3253 -19 313 300 31 31 chr20 1974109 1974239 -70179643 - MIR3 SINE MIR -27 181 52 218 248 9 53 chr20 1974245 1974358 -70179524 + C-rich Low_complexity Low_complexity 4 111 0 823 107 0 50 chr20 1974366 1974487 -70179395 + AluSq SINE Alu 69 183 -130 1911 111 7 28 chr20 1974493 1974831 -70179051 - AluSx SINE Alu 0 332 1 384 219 110 0 chr20 1974852 1974934 -70178948 + MER117 DNA MER1_type 60 150 -47 288 282 154 44 chr20 1975129 1975512 -70178370 - L2 LINE L2 -340 2974 2550 1418 272 40 45 chr20 1975955 1976575 -70177307 + L2 LINE L2 2525 3139 -174 2794 88 6 0 chr20 1976575 1976937 -70176945 + THE1B LTR MaLR 1 364 0 1418 272 40 45 chr20 1976937 1977111 -70176771 + L2 LINE L2 3139 3312 -1 481 268 45 66 chr20 1977189 1977476 -70176406 - L1MCa LINE L1 -5232 1194 914 587 301 28 38 chr20 1978002 1978215 -70175667 + MIR SINE MIR 52 262 0 1137 217 13 4 chr20 1978725 1978955 -70174927 - MIR SINE MIR -22 240 9 183 227 23 45 chr20 1979465 1979509 -70174373 + L2 LINE L2 3205 3247 -25 796 288 151 24 chr20 1979642 1979753 -70174129 + L2 LINE L2 2844 2940 -373 1929 174 7 64 chr20 1979753 1980001 -70173881 - MSTD LTR MaLR 0 396 180 1905 142 30 3 chr20 1980001 1980303 -70173579 - AluSx SINE Alu -2 310 1 1929 174 7 64 chr20 1980303 1980474 -70173408 - MSTD LTR MaLR -216 180 1 796 288 151 24 chr20 1980474 1980779 -70173103 + L2 LINE L2 2940 3313 0 1050 261 103 40 chr20 1981131 1981609 -70172273 - L2 LINE L2 -1 3312 2803 3192 157 38 7 chr20 1981713 1982273 -70171609 - L1MB3 LINE L1 0 6183 5607 1159 287 80 22 chr20 1983272 1983735 -70170147 + L2 LINE L2 2817 3306 -7 973 294 89 12 chr20 1983759 1984341 -70169541 + L2 LINE L2 2566 3186 -127 368 290 75 32 chr20 1984677 1984863 -70169019 + L2 LINE L2 3119 3312 -1 238 342 63 0 chr20 1984894 1985005 -70168877 - MIR SINE MIR -75 187 70 270 318 0 13 chr20 1985005 1985159 -70168723 + (TG)n Simple_repeat Simple_repeat 1 152 0 509 256 143 30 chr20 1985964 1986167 -70167715 + MIR SINE MIR 8 233 -29 589 276 158 13 chr20 1986186 1986414 -70167468 - MIR SINE MIR 0 262 2 441 277 22 36 chr20 1986578 1986715 -70167167 - MIR3 SINE MIR -32 176 42 451 254 127 78 chr20 1986833 1987038 -70166844 - MIR SINE MIR -17 245 31 1525 240 113 15 chr20 1987190 1988024 -70165858 - L2 LINE L2 -5 3308 2380 808 209 12 6 chr20 1988076 1988239 -70165643 - MER5A DNA MER1_type -23 166 3 857 289 29 26 chr20 1988643 1988987 -70164895 + MLT1I LTR MaLR 5 349 -60 726 213 202 0 chr20 1988987 1989170 -70164712 - MER58A DNA MER1_type 0 224 5 280 151 19 0 chr20 1989170 1989223 -70164659 + MLT1I LTR MaLR 340 393 -16 908 297 82 25 chr20 1989330 1989815 -70164067 + LTR33 LTR ERVL 4 516 -5 182 286 117 39 chr20 1989847 1989924 -70163958 + MIR SINE MIR 64 146 -62 422 208 140 1 chr20 1990213 1990336 -70163546 + MIR SINE MIR 32 166 -85 364 311 48 0 chr20 1990350 1990453 -70163429 + L2 LINE L2 3206 3313 0 366 333 135 0 chr20 1990498 1990639 -70163243 + MIR SINE MIR 44 203 -59 466 191 198 0 chr20 1990777 1990903 -70162979 - MIR SINE MIR -74 188 38 215 342 36 63 chr20 1990951 1991062 -70162820 + MIR3 SINE MIR 76 183 -25 386 316 21 21 chr20 1991818 1992005 -70161877 + MIR3 SINE MIR 1 187 -21 1569 268 123 2 chr20 1992446 1992860 -70161022 + LTR16B LTR ERVL 1 464 0 432 255 179 0 chr20 1992914 1993059 -70160823 - MIR SINE MIR -3 259 89 254 343 6 90 chr20 1993090 1993256 -70160626 + L2 LINE L2 3121 3272 0 258 241 52 0 chr20 1993516 1993574 -70160308 + MIR SINE MIR 112 172 -90 508 243 7 49 chr20 1993991 1994135 -70159747 - MIR3 SINE MIR -26 182 45 * 758 315 121 30 chr20 1994126 1994149 -70159733 + L2 LINE L2 2488 2507 -806 234 0 0 0 chr20 1994149 1994175 -70159707 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 758 315 121 30 chr20 1994175 1994880 -70159002 + L2 LINE L2 2507 3297 -16 180 0 0 0 chr20 1994974 1994994 -70158888 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1778 152 0 31 chr20 1994994 1995283 -70158599 - AluJo SINE Alu -32 280 1 730 167 0 38 chr20 1995315 1995501 -70158381 + GA-rich Low_complexity Low_complexity 2 180 0 446 281 113 0 chr20 1996470 1996659 -70157223 + MIR SINE MIR 34 244 -18 221 333 0 0 chr20 1996940 1997003 -70156879 + L2 LINE L2 2913 2975 -338 363 283 100 33 chr20 1997153 1997273 -70156609 - L2 LINE L2 -1 3271 3144 * 514 231 29 0 chr20 1997271 1997375 -70156507 - MER5B DNA MER1_type -4 174 68 2028 138 0 25 chr20 1997378 1997743 -70156139 - AluJb SINE Alu 0 357 1 189 311 16 0 chr20 1997751 1997812 -70156070 - MER5B DNA MER1_type -113 65 4 457 300 64 53 chr20 1997819 1998176 -70155706 - L2 LINE L2 -127 3186 2826 300 270 101 20 chr20 1999063 1999211 -70154671 + MIR3 SINE MIR 46 205 -3 203 227 45 45 chr20 1999931 1999997 -70153885 + MIR SINE MIR 86 151 -57 271 301 112 36 chr20 2000345 2000511 -70153371 + MIR SINE MIR 15 192 -62 340 311 9 0 chr20 2000713 2000819 -70153063 + MIR3 SINE MIR 63 169 -39 235 333 48 12 chr20 2001094 2001178 -70152704 - L2 LINE L2 -23 3290 3204 941 229 86 25 chr20 2001215 2001569 -70152313 - L1M4 LINE L1 -3676 3172 2795 * 1268 211 215 39 chr20 2001548 2001873 -70152009 - L1M4 LINE L1 -5239 1611 1345 188 35 35 0 chr20 2001873 2001902 -70151980 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1268 211 215 39 chr20 2001902 2002093 -70151789 - L1M4 LINE L1 -5505 1345 1004 342 288 59 31 chr20 2002353 2002575 -70151307 - L1M4 LINE L1 -6301 445 218 268 305 228 18 chr20 2002676 2003063 -70150819 - L2 LINE L2 -190 3082 2596 669 319 31 4 chr20 2003513 2003742 -70150140 + MIR SINE MIR 16 250 -12 210 365 137 32 chr20 2004066 2004729 -70149153 - L2 LINE L2 -347 2967 2235 642 264 3 6 chr20 2005342 2005666 -70148216 + GA-rich Low_complexity Low_complexity 1 322 0 282 257 20 20 chr20 2005377 2005478 -70148404 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 * 294 231 19 28 chr20 2005694 2005802 -70148080 + GA-rich Low_complexity Low_complexity 2 108 0 381 86 0 0 chr20 2005888 2005946 -70147936 + (GA)n Simple_repeat Simple_repeat 1 58 0 224 325 8 8 chr20 2005960 2006132 -70147750 + GA-rich Low_complexity Low_complexity 1 172 0 431 349 32 32 chr20 2006362 2006580 -70147302 + MIR SINE MIR 8 225 -37 359 316 70 13 chr20 2007613 2007771 -70146111 - MER117 DNA MER1_type -27 170 4 570 273 42 70 chr20 2007846 2008132 -70145750 - L2 LINE L2 -20 3293 3016 818 281 142 8 chr20 2008708 2009160 -70144722 - L2 LINE L2 -235 3078 2566 1143 123 0 0 chr20 2009201 2009421 -70144461 + (TCCA)n Simple_repeat Simple_repeat 1 220 0 462 284 89 98 chr20 2009431 2009868 -70144014 - L2 LINE L2 -3 3269 2837 1304 235 94 27 chr20 2010429 2010801 -70143081 + L2 LINE L2 2880 3283 -30 1934 137 3 51 chr20 2010801 2011114 -70142768 - AluSx SINE Alu -14 298 1 1304 235 94 27 chr20 2011114 2011145 -70142737 + L2 LINE L2 3283 3310 -3 305 305 21 21 chr20 2011191 2011286 -70142596 - MIR SINE MIR -148 114 20 820 180 19 66 chr20 2011297 2011338 -70142544 + L2 LINE L2 3112 3153 -160 2133 89 30 43 chr20 2011338 2011641 -70142241 - AluSx SINE Alu -13 299 1 820 180 19 66 chr20 2011641 2011810 -70142072 + L2 LINE L2 3153 3312 -1 623 189 101 63 chr20 2011931 2012090 -70141792 - MIR SINE MIR -70 192 28 296 285 26 80 chr20 2012788 2012939 -70140943 + MER5B DNA MER1_type 3 145 -33 1724 290 92 15 chr20 2013653 2014640 -70139242 - L2 LINE L2 -1 3312 2246 539 278 101 44 chr20 2015407 2015655 -70138227 + MIR SINE MIR 1 262 0 544 276 78 43 chr20 2015664 2015896 -70137986 - MIR SINE MIR -13 249 10 206 246 35 35 chr20 2016174 2016231 -70137651 - MIR SINE MIR -98 164 108 606 266 106 19 chr20 2016706 2016913 -70136969 + MIR SINE MIR 14 238 -24 183 42 0 0 chr20 2017112 2017136 -70136746 + (CAA)n Simple_repeat Simple_repeat 1 24 0 890 255 65 47 chr20 2017148 2017436 -70136446 + MLT1J LTR MaLR 3 299 -212 1859 235 88 32 chr20 2017436 2017960 -70135922 + MLT1H1 LTR MaLR 1 553 -2 890 255 65 47 chr20 2017960 2017993 -70135889 + MLT1J LTR MaLR 299 330 -181 243 182 13 91 chr20 2018005 2018082 -70135800 + MLT1J LTR MaLR 386 456 -55 391 280 48 71 chr20 2018326 2018494 -70135388 + MIR SINE MIR 26 189 -73 1309 242 120 54 chr20 2018599 2019133 -70134749 - MER115 DNA AcHobo -66 627 59 216 318 0 30 chr20 2019152 2019218 -70134664 - L2 LINE L2 -37 3235 3172 185 158 0 79 chr20 2019253 2019291 -70134591 + MIR SINE MIR 113 147 -61 417 257 155 30 chr20 2019500 2019839 -70134043 + L2 LINE L2 2751 3132 -181 249 257 95 0 chr20 2020102 2020176 -70133706 + MIR SINE MIR 177 257 -5 23 54 0 0 chr20 2020906 2020943 -70132939 + GC_rich Low_complexity Low_complexity 1 37 0 187 54 54 0 chr20 2020948 2020985 -70132897 + (CGGAG)n Simple_repeat Simple_repeat 5 43 0 537 299 14 14 chr20 2021237 2021381 -70132501 + MIR3 SINE MIR 3 146 -62 274 256 91 33 chr20 2022073 2022194 -70131688 - L1MC4a LINE L1 -1631 6177 6050 673 284 21 17 chr20 2022274 2022513 -70131369 - L1MC4a LINE L1 -1893 5915 5676 334 225 132 79 chr20 2022535 2022762 -70131120 - MLT1H LTR MaLR -9 540 332 582 249 74 21 chr20 2022803 2022992 -70130890 - MLT1H LTR MaLR -331 218 20 577 199 41 53 chr20 2023165 2023336 -70130546 + L1MC3 LINE L1 7221 7389 -396 7890 166 51 73 chr20 2023342 2024317 -70129565 - L1MC3 LINE L1 -620 7583 6671 2285 83 20 0 chr20 2024317 2024618 -70129264 - AluSp SINE Alu -6 307 1 7890 166 51 73 chr20 2024618 2025593 -70128289 - L1MC3 LINE L1 -1532 6671 5676 1703 172 42 20 chr20 2025600 2025954 -70127928 + MLT2B1 LTR ERVL 1 362 -158 7906 247 68 24 chr20 2025985 2026044 -70127838 - L1MC3 LINE L1 -886 5678 5623 1536 185 35 0 chr20 2026044 2026304 -70127578 - AluJo SINE Alu -2 310 42 1720 136 0 19 chr20 2026306 2026564 -70127318 - AluSx SINE Alu -59 253 1 7906 247 68 24 chr20 2026564 2027047 -70126835 - L1MC3 LINE L1 -941 5623 5162 1494 138 0 9 chr20 2027047 2027272 -70126610 - AluSg/x SINE Alu -3 307 85 7906 247 68 24 chr20 2027272 2029568 -70124314 - L1MC3 LINE L1 -1402 5162 2713 1532 163 15 45 chr20 2029583 2029674 -70124208 - L1MB7 LINE L1 -19 6165 6073 2009 113 63 14 chr20 2029674 2029958 -70123924 + AluSx SINE Alu 2 299 -13 1532 163 15 45 chr20 2029958 2030198 -70123684 - L1MB7 LINE L1 -111 6073 5844 345 191 0 0 chr20 2030202 2030265 -70123617 - FRAM/FAM SINE Alu -100 66 4 1394 170 10 35 chr20 2030265 2030554 -70123328 - L1MB7 LINE L1 -346 5838 5557 2738 185 50 35 chr20 2030561 2031775 -70122107 - L1MB4 LINE L1 -250 5930 4693 1080 184 108 54 chr20 2031782 2032098 -70121784 + MLT1D LTR MaLR 173 505 0 * 1091 155 11 0 chr20 2032096 2032283 -70121599 - MER46B DNA MER2_type 0 236 48 2307 106 48 34 chr20 2032284 2032642 -70121240 + THE1B LTR MaLR 1 363 -1 315 0 0 0 chr20 2032711 2032746 -70121136 + (TG)n Simple_repeat Simple_repeat 2 36 0 719 170 0 0 chr20 2032756 2032862 -70121020 - FLAM_A SINE Alu -25 117 12 1125 135 6 0 chr20 2032873 2033051 -70120831 - MER46B DNA MER2_type -181 55 2 1970 244 89 78 chr20 2033054 2034008 -70119874 - L1MC3 LINE L1 -5080 965 1 246 297 28 83 chr20 2034317 2034462 -70119420 + L2 LINE L2 3177 3313 0 725 270 42 0 chr20 2034507 2034696 -70119186 - MIR SINE MIR 0 262 66 372 371 7 0 chr20 2034790 2034930 -70118952 - MIR SINE MIR -109 153 13 232 278 56 0 chr20 2034964 2035054 -70118828 + L2 LINE L2 2963 3057 -215 234 315 105 49 chr20 2035134 2035277 -70118605 + MIR SINE MIR 2 152 -110 229 365 149 14 chr20 2035343 2035491 -70118391 + L2 LINE L2 3104 3271 -1 230 253 0 58 chr20 2035611 2035698 -70118184 + MER112 DNA MER1_type 13 94 -166 237 319 43 0 chr20 2035701 2035795 -70118087 + MER112 DNA MER1_type 69 166 -94 334 272 26 26 chr20 2035854 2035968 -70117914 + MER112 DNA MER1_type 147 260 0 420 275 99 22 chr20 2035977 2036159 -70117723 - L3 LINE CR1 -74 1503 1308 778 248 53 46 chr20 2036787 2037069 -70116813 - L2 LINE L2 0 3272 2989 431 237 21 0 chr20 2037637 2037734 -70116148 - MER45 DNA AcHobo -56 122 24 426 331 69 0 chr20 2037820 2037995 -70115887 - MIR3 SINE MIR -16 192 6 549 293 214 8 chr20 2038351 2038743 -70115139 + L2 LINE L2 2841 3313 0 288 314 7 51 chr20 2038756 2038893 -70114989 - L2 LINE L2 -3 3310 3180 2204 97 3 0 chr20 2039025 2039323 -70114559 - AluSg SINE Alu -11 299 1 188 176 0 0 chr20 2039772 2039806 -70114076 + L2 LINE L2 3028 3061 -211 399 98 0 0 chr20 2039864 2039925 -70113957 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 269 238 63 0 chr20 2039949 2040012 -70113870 - L2 LINE L2 -68 3204 3138 467 194 7 57 chr20 2040121 2040255 -70113627 + MER3 DNA MER1_type 29 151 -58 251 224 26 53 chr20 2040458 2040534 -70113348 - MIR SINE MIR -90 118 45 197 306 266 8 chr20 2040610 2040734 -70113148 - L2 LINE L2 -1 3271 3116 283 212 204 9 chr20 2041051 2041164 -70112718 - MIR SINE MIR -96 166 32 407 179 36 0 chr20 2041372 2041456 -70112426 + MIR SINE MIR 70 156 -106 562 266 113 8 chr20 2041473 2041729 -70112153 + L2 LINE L2 2830 3112 -201 205 185 130 0 chr20 2041988 2042042 -70111840 + L2 LINE L2 3193 3253 -60 211 173 192 0 chr20 2042963 2043015 -70110867 - MIR SINE MIR -196 66 5 199 139 0 56 chr20 2043213 2043249 -70110633 + MER5A DNA MER1_type 156 189 0 561 231 51 19 chr20 2043344 2043500 -70110382 - MIR SINE MIR 0 262 102 258 306 102 27 chr20 2044642 2044789 -70109093 + MIR SINE MIR 1 158 -104 573 282 151 17 chr20 2044812 2045569 -70108313 - L2 LINE L2 -2 3311 2444 185 182 23 0 chr20 2045839 2045883 -70107999 - MIR SINE MIR -104 104 60 220 136 23 0 chr20 2045974 2046018 -70107864 + L2 LINE L2 2922 2966 -348 291 353 98 27 chr20 2046878 2047102 -70106780 - L2 LINE L2 -17 3255 3016 277 286 107 9 chr20 2047111 2047223 -70106659 - L2 LINE L2 -2 3311 3189 285 89 0 0 chr20 2047366 2047411 -70106471 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 2313 79 0 28 chr20 2047554 2047871 -70106011 - AluSx SINE Alu -4 308 1 327 259 5 54 chr20 2048897 2049082 -70104800 + (CA)n Simple_repeat Simple_repeat 1 176 0 221 314 12 0 chr20 2049138 2049224 -70104658 + (CA)n Simple_repeat Simple_repeat 2 88 0 368 275 169 0 chr20 2049535 2049695 -70104187 + L3 LINE CR1 1391 1577 0 429 247 31 21 chr20 2049715 2049909 -70103973 - Charlie7 DNA MER1_type 0 2612 2417 563 304 72 36 chr20 2049931 2050181 -70103701 - MIR SINE MIR 0 262 4 490 220 10 0 chr20 2050363 2050463 -70103419 + MER5A DNA MER1_type 9 109 -80 548 265 309 8 chr20 2050674 2051124 -70102758 + L2 LINE L2 2725 3307 -6 246 213 118 88 chr20 2051514 2051650 -70102232 + MIR SINE MIR 53 192 -70 198 322 157 9 chr20 2051741 2051856 -70102026 + MIR3 SINE MIR 14 145 -63 1302 250 152 11 chr20 2052296 2053096 -70100786 - L2 LINE L2 -1 3312 2394 188 33 0 33 chr20 2053137 2053167 -70100715 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 277 219 287 1 chr20 2053186 2053310 -70100572 - MIR SINE MIR -51 157 1 637 309 36 5 chr20 2053537 2053760 -70100122 + MIR SINE MIR 13 242 -20 1032 215 0 0 chr20 2054244 2054430 -70099452 + MER5A DNA MER1_type 1 186 -3 972 191 0 5 chr20 2054591 2054780 -70099102 - AluJo SINE Alu -2 310 123 318 217 191 9 chr20 2054861 2054976 -70098906 - MIR SINE MIR -51 211 76 408 266 62 23 chr20 2055023 2055200 -70098682 - L2 LINE L2 -119 3194 3011 221 286 36 0 chr20 2055197 2055253 -70098629 + MIR3 SINE MIR 109 166 -42 * 183 270 234 27 chr20 2055760 2055871 -70098011 + MIR SINE MIR 85 218 -44 218 258 93 31 chr20 2055980 2056077 -70097805 - MIR SINE MIR -110 152 50 503 279 156 8 chr20 2056121 2056358 -70097524 - L2 LINE L2 -580 2734 2463 719 237 98 44 chr20 2056394 2056668 -70097214 + L2 LINE L2 3025 3313 0 363 268 102 13 chr20 2057256 2057413 -70096469 + L2 LINE L2 2618 2788 -526 297 274 244 17 chr20 2057503 2057733 -70096149 + L2 LINE L2 2944 3225 -88 550 266 136 14 chr20 2057832 2058046 -70095836 - MIR SINE MIR -5 257 18 300 279 117 9 chr20 2058152 2058263 -70095619 + MIR3 SINE MIR 33 155 -53 32 0 0 0 chr20 2058943 2058975 -70094907 + GC_rich Low_complexity Low_complexity 1 32 0 237 219 0 16 chr20 2059201 2059265 -70094617 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr20 2059333 2059361 -70094521 + GC_rich Low_complexity Low_complexity 1 28 0 28 71 0 0 chr20 2059375 2059431 -70094451 + GC_rich Low_complexity Low_complexity 1 56 0 23 78 0 0 chr20 2059646 2059697 -70094185 + GC_rich Low_complexity Low_complexity 1 51 0 275 283 7 36 chr20 2059768 2059945 -70093937 + CT-rich Low_complexity Low_complexity 6 268 0 22 0 0 0 chr20 2059976 2059998 -70093884 + GC_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr20 2060147 2060182 -70093700 + GC_rich Low_complexity Low_complexity 1 35 0 365 146 195 0 chr20 2060347 2060429 -70093453 - MIR SINE MIR -69 139 42 193 269 0 19 chr20 2063232 2063284 -70090598 - MIR SINE MIR -60 148 98 257 296 0 0 chr20 2063838 2063909 -70089973 + L2 LINE L2 2704 2774 -540 233 345 0 23 chr20 2064062 2064149 -70089733 - MER103 DNA DNA -67 99 15 241 292 17 50 chr20 2064244 2064364 -70089518 + L2 LINE L2 2920 3035 -237 501 297 139 5 chr20 2064421 2064623 -70089259 + MIR SINE MIR 34 262 0 2233 65 41 0 chr20 2064786 2065078 -70088804 - AluSp SINE Alu -4 309 6 372 333 58 24 chr20 2065529 2065736 -70088146 - MIR SINE MIR -43 219 6 2386 90 0 0 chr20 2065854 2066165 -70087717 - AluSx SINE Alu -1 311 1 317 304 37 30 chr20 2066965 2067100 -70086782 - MIR SINE MIR -71 191 56 1095 253 104 23 chr20 2067160 2067424 -70086458 - L2 LINE L2 -4 3309 2993 2411 87 0 0 chr20 2067424 2067736 -70086146 + AluSx SINE Alu 1 312 0 1095 253 104 23 chr20 2067736 2067914 -70085968 - L2 LINE L2 -320 2993 2831 616 217 53 16 chr20 2067929 2068132 -70085750 - MIR SINE MIR -15 247 40 186 286 60 0 chr20 2068127 2068211 -70085671 + L2 LINE L2 2606 2694 -620 * 830 310 111 18 chr20 2068265 2068723 -70085159 + L2 LINE L2 2812 3312 -1 243 390 8 8 chr20 2069170 2069293 -70084589 + MIR SINE MIR 70 192 -70 210 321 30 30 chr20 2069384 2069515 -70084367 + MIR3 SINE MIR 64 194 -14 517 255 22 33 chr20 2069593 2069777 -70084105 + MIR SINE MIR 31 212 -50 257 206 221 59 chr20 2070029 2070165 -70083717 + MIR SINE MIR 34 191 -71 243 158 0 0 chr20 2070302 2070340 -70083542 + MIR SINE MIR 112 149 -59 392 285 162 39 chr20 2070766 2070945 -70082937 - MIR SINE MIR -17 245 45 585 297 151 34 chr20 2070957 2071593 -70082289 - L2 LINE L2 -39 3274 2461 235 273 191 0 chr20 2071659 2071769 -70082113 - MIR SINE MIR -115 147 17 440 328 119 25 chr20 2072181 2072501 -70081381 + L2 LINE L2 2923 3272 0 240 269 27 20 chr20 2072989 2073138 -70080744 + (CA)n Simple_repeat Simple_repeat 1 150 0 2298 94 0 0 chr20 2074194 2074491 -70079391 + AluSq SINE Alu 1 297 -16 375 226 0 12 chr20 2074590 2074674 -70079208 + L2 LINE L2 1912 1994 -1320 233 262 135 48 chr20 2074786 2074912 -70078970 + L2 LINE L2 3146 3282 -31 428 178 33 0 chr20 2075229 2075319 -70078563 - L2 LINE L2 -7 3306 3214 310 327 115 62 chr20 2075400 2075626 -70078256 - L1ME4a LINE L1 -11 6110 5873 352 303 101 0 chr20 2076017 2076136 -70077746 + L1ME4a LINE L1 5985 6115 -6 233 331 46 13 chr20 2076138 2076289 -70077593 - L1ME4a LINE L1 -242 5879 5724 259 333 0 0 chr20 2076378 2076456 -70077426 - L1ME4a LINE L1 -2214 5594 5517 351 322 68 11 chr20 2078855 2079032 -70074850 - MIR SINE MIR -48 214 28 262 278 26 0 chr20 2079062 2079152 -70074730 - MIR SINE MIR -66 142 104 354 273 133 0 chr20 2079418 2079546 -70074336 + L2 LINE L2 2899 3043 -229 299 284 147 0 chr20 2079574 2079669 -70074213 + MIR SINE MIR 96 204 -58 292 309 0 12 chr20 2080271 2080352 -70073530 - MIR SINE MIR -116 146 67 268 173 158 0 chr20 2080404 2080475 -70073407 - MIR3 SINE MIR -50 158 77 193 304 0 0 chr20 2080525 2080571 -70073311 - L2 LINE L2 -2 3270 3225 413 308 64 6 chr20 2080959 2081115 -70072767 - MIR3 SINE MIR -8 200 36 684 304 84 0 chr20 2081331 2081594 -70072288 - L1MC4a LINE L1 -1957 5851 5567 253 299 73 36 chr20 2081670 2081807 -70072075 - MIR3 SINE MIR -66 142 1 348 274 110 24 chr20 2081899 2082063 -70071819 - MIR SINE MIR -82 180 3 808 131 8 0 chr20 2082131 2082253 -70071629 + AluSg/x SINE Alu 177 299 -11 303 330 61 0 chr20 2082738 2082853 -70071029 + MIR SINE MIR 98 219 -43 2013 96 12 52 chr20 2082882 2083206 -70070676 - AluSq SINE Alu -2 311 1 408 261 27 0 chr20 2083223 2083334 -70070548 + MIR SINE MIR 79 192 -70 316 240 108 39 chr20 2083383 2083512 -70070370 + MIR SINE MIR 84 221 -41 686 295 59 25 chr20 2083548 2083785 -70070097 + MIR SINE MIR 14 258 -4 532 274 65 18 chr20 2083866 2084034 -70069848 - MER5B DNA MER1_type -2 176 1 227 211 0 0 chr20 2084689 2084727 -70069155 - L2 LINE L2 -18 3254 3217 199 256 132 23 chr20 2084785 2084914 -70068968 + MIR SINE MIR 108 250 -12 222 286 57 14 chr20 2085536 2085606 -70068276 - MIR SINE MIR -64 198 126 222 341 85 0 chr20 2085835 2085964 -70067918 + MIR SINE MIR 28 167 -95 182 356 0 0 chr20 2086789 2086848 -70067034 - MIR SINE MIR 0 262 204 350 294 27 76 chr20 2087404 2087588 -70066294 - HAL1b LINE L1 -5 1343 1169 301 342 76 30 chr20 2087609 2087846 -70066036 - L1MC4a LINE L1 -1911 5897 5650 399 281 89 20 chr20 2088407 2088553 -70065329 + MIR3 SINE MIR 32 187 -21 344 254 136 9 chr20 2088539 2088649 -70065233 + L2 LINE L2 3147 3270 -2 * 474 18 0 0 chr20 2088663 2088718 -70065164 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 406 256 78 67 chr20 2088721 2088901 -70064981 - MIR SINE MIR -76 186 5 254 226 122 43 chr20 2089980 2090095 -70063787 + MIR SINE MIR 139 262 0 208 171 24 0 chr20 2090223 2090264 -70063618 + (TG)n Simple_repeat Simple_repeat 1 42 0 347 315 162 25 chr20 2090306 2090503 -70063379 + MIR SINE MIR 29 252 -10 779 259 37 5 chr20 2091282 2091471 -70062411 - MIR SINE MIR -21 241 47 277 281 16 0 chr20 2091585 2091649 -70062233 + MIR SINE MIR 53 117 -91 263 286 25 67 chr20 2092090 2092209 -70061673 - MIR3 SINE MIR -86 122 9 266 311 151 8 chr20 2092952 2093071 -70060811 - L2 LINE L2 -1 3271 3136 426 293 141 39 chr20 2093139 2093395 -70060487 - L2 LINE L2 -24 3289 3008 631 264 71 0 chr20 2093601 2093798 -70060084 - MER46C DNA MER2_type -109 229 19 928 239 137 0 chr20 2093818 2094102 -70059780 - L2 LINE L2 -506 2808 2486 229 129 0 0 chr20 2094811 2094842 -70059040 - MER91 DNA MER1_type -77 63 33 269 383 31 25 chr20 2094933 2095129 -70058753 + L2 LINE L2 3076 3272 0 2420 89 3 13 chr20 2095268 2095584 -70058298 - AluSp SINE Alu 0 313 1 608 251 18 127 chr20 2095672 2095803 -70058079 - MIR SINE MIR 0 262 177 853 158 152 0 chr20 2095803 2095967 -70057915 - MER5A DNA MER1_type 0 189 1 608 251 18 127 chr20 2095967 2096118 -70057764 - MIR SINE MIR -85 177 11 196 359 111 0 chr20 2096631 2096748 -70057134 - L2 LINE L2 -1 3271 3142 297 0 0 0 chr20 2096748 2096781 -70057101 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 905 290 112 22 chr20 2096782 2097630 -70056252 - L2 LINE L2 -14 3299 2364 495 301 58 52 chr20 2098970 2099315 -70054567 - L1MC/D LINE L1 -2141 5667 5321 213 197 127 28 chr20 2099661 2099732 -70054150 + MER91C DNA MER1_type 33 110 -30 207 250 220 10 chr20 2100414 2100514 -70053368 - L2 LINE L2 -4 3309 3189 345 306 147 17 chr20 2100602 2100786 -70053096 + MIR SINE MIR 3 205 -41 1072 195 49 26 chr20 2101001 2101227 -70052655 - MIR SINE MIR 0 262 32 193 320 0 0 chr20 2101381 2101431 -70052451 + L2 LINE L2 3223 3272 0 426 53 0 0 chr20 2102662 2102719 -70051163 + (CCA)n Simple_repeat Simple_repeat 2 58 0 232 162 0 0 chr20 2103475 2103512 -70050370 + MIR SINE MIR 116 152 -110 21 0 0 0 chr20 2104306 2104327 -70049555 + AT_rich Low_complexity Low_complexity 1 21 0 371 313 114 0 chr20 2104816 2104992 -70048890 + MIR SINE MIR 48 243 -19 205 333 164 24 chr20 2105045 2105210 -70048672 + MIR SINE MIR 69 256 -6 278 330 210 10 chr20 2105287 2105487 -70048395 - MIR SINE MIR -16 246 7 512 279 134 0 chr20 2105552 2105724 -70048158 - MIR SINE MIR -32 230 36 337 331 70 7 chr20 2105743 2105885 -70047997 - MIR SINE MIR -64 198 48 604 247 22 60 chr20 2106604 2106786 -70047096 - MIR SINE MIR -19 243 69 671 221 137 5 chr20 2107124 2107328 -70046554 + L1ME3 LINE L1 5926 6156 -6 416 325 35 6 chr20 2107685 2107854 -70046028 + MIR SINE MIR 77 250 -12 207 175 0 0 chr20 2107854 2107894 -70045988 + (CA)n Simple_repeat Simple_repeat 1 40 0 286 325 104 32 chr20 2108293 2108447 -70045435 - MIR SINE MIR -24 238 74 242 339 64 0 chr20 2108432 2108541 -70045341 - L2 LINE L2 -2 3311 3196 * 1008 244 60 52 chr20 2108628 2109010 -70044872 - LTR37B LTR ERV1 -78 390 6 229 336 27 55 chr20 2109030 2109176 -70044706 - L2 LINE L2 -200 3072 2931 * 256 333 113 0 chr20 2109155 2109332 -70044550 + L2 LINE L2 2774 2970 -344 194 369 77 18 chr20 2109417 2109585 -70044297 + L2 LINE L2 3120 3297 -16 210 222 17 8 chr20 2109589 2109706 -70044176 + (TGGA)n Simple_repeat Simple_repeat 2 119 0 227 200 36 18 chr20 2109706 2109761 -70044121 + GA-rich Low_complexity Low_complexity 2 57 0 1514 131 120 29 chr20 2110795 2111069 -70042813 - AluJo SINE Alu -11 301 3 758 165 139 34 chr20 2111078 2111287 -70042595 + L1ME1 LINE L1 5928 6161 -5 769 259 47 14 chr20 2111309 2111521 -70042361 - MIR SINE MIR 0 262 44 186 320 20 0 chr20 2111548 2111598 -70042284 - MIR SINE MIR -111 97 47 218 305 38 30 chr20 2112405 2112519 -70041363 - MIR SINE MIR -87 121 8 828 264 9 27 chr20 2112564 2112784 -70041098 + MIR SINE MIR 32 247 -15 261 0 0 0 chr20 2112925 2112954 -70040928 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 443 256 128 95 chr20 2112994 2113116 -70040766 - L2 LINE L2 -74 3239 3122 1656 176 6 61 chr20 2113116 2113446 -70040436 + AluSx SINE Alu 1 312 0 443 256 128 95 chr20 2113446 2113628 -70040254 - L2 LINE L2 -191 3122 2925 226 278 0 14 chr20 2113997 2114069 -70039813 - L1MC/D LINE L1 -2031 5777 5707 2279 129 0 0 chr20 2115060 2115370 -70038512 - AluSx SINE Alu -2 310 1 380 332 94 47 chr20 2115441 2115676 -70038206 - MIR SINE MIR -2 260 15 613 165 112 41 chr20 2115984 2116154 -70037728 + MER53 DNA DNA 8 189 0 246 172 86 0 chr20 2116573 2116631 -70037251 + L2 LINE L2 2992 3054 -218 199 122 41 0 chr20 2116742 2116791 -70037091 + GA-rich Low_complexity Low_complexity 2 52 0 916 263 4 18 chr20 2116952 2117180 -70036702 + MIR SINE MIR 8 232 -30 361 259 184 49 chr20 2117417 2117602 -70036280 + MIR SINE MIR 37 246 -16 937 136 6 6 chr20 2117794 2117963 -70035919 + (GGAA)n Simple_repeat Simple_repeat 4 172 0 264 160 20 0 chr20 2117969 2118019 -70035863 + GA-rich Low_complexity Low_complexity 2 52 0 204 314 221 0 chr20 2118663 2118749 -70035133 - L2 LINE L2 -18 3295 3191 443 273 99 17 chr20 2118779 2118892 -70034990 + MER5A DNA MER1_type 4 137 -52 2492 37 40 3 chr20 2118892 2119191 -70034691 - AluY SINE Alu -1 310 1 443 273 99 17 chr20 2119191 2119249 -70034633 + MER5A DNA MER1_type 137 189 0 2127 133 7 7 chr20 2119342 2119644 -70034238 - AluSx SINE Alu -10 302 1 243 254 87 14 chr20 2119707 2119845 -70034037 - L1ME4a LINE L1 -29 6092 5945 2877 163 160 26 chr20 2119883 2120467 -70033415 + LTR48 LTR ERV1 1 694 -93 1690 193 3 25 chr20 2120467 2120783 -70033099 - AluJo SINE Alu -3 309 1 2877 163 160 26 chr20 2120783 2120892 -70032990 + LTR48 LTR ERV1 694 787 0 1018 166 44 0 chr20 2120898 2121079 -70032803 - MER5A DNA MER1_type 0 189 1 371 265 122 41 chr20 2121113 2121260 -70032622 + MIR SINE MIR 52 210 -52 763 281 83 17 chr20 2121389 2121730 -70032152 - L1ME4a LINE L1 -405 5716 5391 204 371 0 0 chr20 2121997 2122067 -70031815 - L2 LINE L2 -2 3270 3201 204 263 0 35 chr20 2122188 2122245 -70031637 + MIR SINE MIR 31 85 -177 3283 240 41 32 chr20 2122524 2122799 -70031083 + L1MEc LINE L1 247 518 -6089 1281 177 14 140 chr20 2122799 2122844 -70031038 + MLT1A1 LTR MaLR 1 50 -315 1719 182 10 23 chr20 2122844 2123146 -70030736 + AluJo SINE Alu 1 298 -14 1281 177 14 140 chr20 2123146 2123513 -70030369 + MLT1A1 LTR MaLR 50 361 -4 3283 240 41 32 chr20 2123513 2124355 -70029527 + L1MEc LINE L1 518 1455 -5152 236 230 27 0 chr20 2124392 2124466 -70029416 + L1MC4 LINE L1 6617 6692 -1350 180 0 0 0 chr20 2124474 2124494 -70029388 + (TA)n Simple_repeat Simple_repeat 2 21 0 302 200 75 0 chr20 2124507 2124587 -70029295 + L1MEc LINE L1 1455 1540 -4886 507 286 8 28 chr20 2124681 2124929 -70028953 + L1MEc LINE L1 1417 1659 -4767 1365 146 4 40 chr20 2124929 2125155 -70028727 + AluJb SINE Alu 87 304 -8 2770 192 25 27 chr20 2125156 2125829 -70028053 + L1MEc LINE L1 1849 2520 -4087 201 228 152 25 chr20 2126233 2126312 -70027570 - L3 LINE CR1 -1044 533 445 449 332 40 65 chr20 2126397 2126644 -70027238 - L2 LINE L2 0 3272 3032 360 279 89 32 chr20 2127460 2127650 -70026232 + L2 LINE L2 2840 3040 -232 246 231 0 0 chr20 2127899 2127964 -70025918 + GA-rich Low_complexity Low_complexity 1 65 0 285 247 12 0 chr20 2127974 2128055 -70025827 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 314 284 6 0 chr20 2128073 2128249 -70025633 + (TGAA)n Simple_repeat Simple_repeat 4 180 0 23 0 0 0 chr20 2128269 2128292 -70025590 + AT_rich Low_complexity Low_complexity 1 23 0 415 216 0 0 chr20 2128409 2128483 -70025399 + L2 LINE L2 3240 3313 0 300 330 46 9 chr20 2128543 2128652 -70025230 + MIR SINE MIR 40 152 -56 3665 147 41 35 chr20 2128686 2129317 -70024565 - MER41B LTR ERV1 0 635 1 1570 177 126 49 chr20 2129533 2129963 -70023919 + MER31B LTR ERV1 2 464 -2 357 209 11 33 chr20 2130953 2131044 -70022838 - LTR16A1 LTR ERVL -128 329 241 950 290 21 39 chr20 2132352 2132622 -70021260 + MLT1J LTR MaLR 1 263 -248 2652 140 11 32 chr20 2132622 2133057 -70020825 + MSTB LTR MaLR 1 426 0 950 290 21 39 chr20 2133057 2133172 -70020710 + MLT1J LTR MaLR 263 379 -132 346 133 72 36 chr20 2133212 2133295 -70020587 + MLT1H LTR MaLR 38 123 -426 326 215 193 7 chr20 2133494 2133629 -70020253 + MLT1J LTR MaLR 382 541 -8 368 185 62 0 chr20 2133636 2133717 -70020165 + MLT1J LTR MaLR 389 474 -37 280 254 56 0 chr20 2134219 2134290 -70019592 + MIR SINE MIR 108 182 -80 522 276 45 49 chr20 2134396 2134581 -70019301 + L2 LINE L2 2830 3015 -298 2033 128 26 10 chr20 2134581 2134887 -70018995 - AluY SINE Alu 0 311 1 522 276 45 49 chr20 2134887 2134947 -70018935 + L2 LINE L2 3015 3074 -239 2193 146 39 3 chr20 2135010 2135402 -70018480 + L1MC2 LINE L1 5657 6088 -243 24 53 0 0 chr20 2135402 2135440 -70018442 + AT_rich Low_complexity Low_complexity 1 38 0 1107 191 103 39 chr20 2135459 2135714 -70018168 + L1MC2 LINE L1 6045 6282 -62 2144 108 21 0 chr20 2135714 2136000 -70017882 + AluSx SINE Alu 1 292 -20 1107 191 103 39 chr20 2136000 2136012 -70017870 + L1MC2 LINE L1 6282 6292 -52 2385 90 0 10 chr20 2136012 2136327 -70017555 - AluSq SINE Alu -1 312 6 1107 191 103 39 chr20 2136327 2136340 -70017542 + L1MC2 LINE L1 6292 6344 0 884 234 141 41 chr20 2136663 2137031 -70016851 - MER113 DNA MER1_type? -114 407 3 415 236 66 0 chr20 2137170 2137276 -70016606 + MER94 DNA DNA 2 114 -20 581 231 48 14 chr20 2138546 2138693 -70015189 + L2 LINE L2 2650 2801 -513 657 302 74 55 chr20 2138813 2139287 -70014595 + L2 LINE L2 2831 3313 0 186 125 62 0 chr20 2139390 2139422 -70014460 - MIR SINE MIR -112 150 117 455 285 44 7 chr20 2140421 2140558 -70013324 + L1ME3 LINE L1 6021 6162 0 555 268 91 25 chr20 2140693 2140891 -70012991 + MLT1K LTR MaLR 317 527 -61 345 265 140 7 chr20 2140986 2141122 -70012760 - MIR SINE MIR -89 173 20 292 259 70 49 chr20 2141303 2141446 -70012436 + Charlie8 DNA MER1_type 39 184 -2233 632 298 55 38 chr20 2141608 2141843 -70012039 + MLT1K LTR MaLR 25 263 -325 618 250 97 20 chr20 2141869 2142065 -70011817 + MLT1K LTR MaLR 320 530 -58 403 321 121 38 chr20 2142160 2142400 -70011482 + L3 LINE CR1 1311 1570 -7 602 283 86 54 chr20 2142408 2142687 -70011195 + L2 LINE L2 3024 3311 -2 658 269 90 0 chr20 2143076 2143232 -70010650 - MIR SINE MIR -12 250 81 279 0 0 0 chr20 2143315 2143346 -70010536 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 33 0 0 chr20 2144733 2144763 -70009119 + (CTG)n Simple_repeat Simple_repeat 1 30 0 211 291 100 27 chr20 2145833 2145943 -70007939 - MIR3 SINE MIR -77 131 14 1918 146 0 0 chr20 2146339 2146660 -70007222 + AluSx SINE Alu 2 322 0 1868 154 0 0 chr20 2146673 2146966 -70006916 + AluSx SINE Alu 5 297 -15 348 308 110 14 chr20 2146985 2147131 -70006751 - MIR3 SINE MIR -45 163 4 199 224 35 17 chr20 2147914 2147972 -70005910 - MIR SINE MIR -63 145 87 333 314 152 21 chr20 2147989 2148180 -70005702 - MIR SINE MIR -19 243 28 675 281 62 31 chr20 2148506 2148766 -70005116 + L2 LINE L2 2828 3095 -177 834 275 83 54 chr20 2148870 2149277 -70004605 + L2 LINE L2 2895 3313 0 1922 151 0 0 chr20 2149312 2149604 -70004278 + AluSx SINE Alu 2 293 -19 398 272 49 22 chr20 2150216 2150362 -70003520 - MIR SINE MIR -50 212 64 722 278 58 0 chr20 2150802 2151007 -70002875 - MIR SINE MIR -44 218 2 190 297 119 0 chr20 2151084 2151185 -70002697 + L2 LINE L2 2643 2755 -559 503 311 42 32 chr20 2151234 2151424 -70002458 - MIR SINE MIR -3 259 68 426 232 101 116 chr20 2151489 2151696 -70002186 + L2 LINE L2 2902 3105 -167 258 322 91 10 chr20 2151738 2151937 -70001945 - L2 LINE L2 -367 2947 2733 279 0 0 0 chr20 2151943 2151974 -70001908 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 414 248 0 44 chr20 2152047 2152160 -70001722 + Charlie8 DNA MER1_type 87 194 -2223 655 275 66 37 chr20 2152355 2152572 -70001310 + MIR SINE MIR 16 241 -21 482 306 35 30 chr20 2152780 2152979 -70000903 - MIR SINE MIR -3 259 60 497 196 9 54 chr20 2153505 2153617 -70000265 + MLT2D LTR ERVL 307 413 -1 704 222 7 7 chr20 2153618 2153762 -70000120 + MER58B DNA MER1_type 194 337 -4 257 322 30 26 chr20 2154375 2154511 -69999371 - MIR SINE MIR -61 147 19 205 266 119 46 chr20 2154621 2154730 -69999152 - MIR SINE MIR -90 172 56 283 343 56 11 chr20 2154777 2154955 -69998927 - MIR SINE MIR -37 225 40 303 322 0 0 chr20 2155435 2155628 -69998254 + GA-rich Low_complexity Low_complexity 1 193 0 341 272 20 20 chr20 2155642 2155789 -69998093 + GA-rich Low_complexity Low_complexity 1 147 0 653 266 99 21 chr20 2156753 2156945 -69996937 - MIR SINE MIR -8 254 48 203 272 49 37 chr20 2156939 2157020 -69996862 - L2 LINE L2 -41 3272 3191 * 189 0 0 0 chr20 2157747 2157768 -69996114 + (T)n Simple_repeat Simple_repeat 1 21 0 263 272 52 35 chr20 2159060 2159089 -69994793 + (CAGAGA)n Simple_repeat Simple_repeat 4 31 -148 204 40 0 0 chr20 2159089 2159114 -69994768 + (GA)n Simple_repeat Simple_repeat 2 26 0 263 272 52 35 chr20 2159114 2159257 -69994625 + (CAGAGA)n Simple_repeat Simple_repeat 31 179 0 * 327 330 0 0 chr20 2159157 2159340 -69994542 + GA-rich Low_complexity Low_complexity 1 183 0 459 303 52 7 chr20 2159917 2160072 -69993810 - MIR SINE MIR -73 189 28 448 313 49 0 chr20 2160328 2160491 -69993391 + MIR SINE MIR 49 219 -43 333 0 0 0 chr20 2161460 2161497 -69992385 + (CA)n Simple_repeat Simple_repeat 2 38 0 188 268 61 61 chr20 2161633 2161715 -69992167 + MIR SINE MIR 37 118 -144 649 309 36 0 chr20 2161959 2162211 -69991671 - MIR SINE MIR 0 262 2 183 205 0 0 chr20 2162513 2162552 -69991330 + CT-rich Low_complexity Low_complexity 2 40 0 681 293 40 63 chr20 2162556 2162935 -69990947 - L2 LINE L2 -5 3267 2898 996 263 186 21 chr20 2162975 2163115 -69990767 + L2 LINE L2 2553 2669 -644 2217 120 0 0 chr20 2163115 2163424 -69990458 + AluSq SINE Alu 1 309 -4 996 263 186 21 chr20 2163424 2163924 -69989958 + L2 LINE L2 2669 3311 -2 214 304 59 29 chr20 2163930 2164032 -69989850 - L2 LINE L2 -413 2901 2797 242 333 128 55 chr20 2164148 2164367 -69989515 - L2 LINE L2 -51 3221 2987 1939 207 30 62 chr20 2164403 2164607 -69989275 + L1MB4 LINE L1 5495 5704 -476 201 74 0 0 chr20 2164607 2164634 -69989248 + (CAT)n Simple_repeat Simple_repeat 1 27 0 390 227 0 0 chr20 2164637 2164703 -69989179 - AluJ/FRAM SINE Alu -16 286 221 716 188 8 0 chr20 2164710 2164857 -69989025 - FLAM_C SINE Alu 0 148 1 1939 207 30 62 chr20 2164857 2165267 -69988615 + L1MB4 LINE L1 5712 6096 -84 673 301 55 17 chr20 2165341 2165577 -69988305 - MIR SINE MIR -6 256 12 509 281 69 31 chr20 2165628 2165870 -69988012 - MIR SINE MIR -13 249 3 685 262 109 9 chr20 2166169 2166390 -69987492 - MIR SINE MIR 0 262 20 398 335 51 51 chr20 2166695 2166970 -69986912 - L2 LINE L2 -4 3268 2994 254 383 17 0 chr20 2167410 2167525 -69986357 - LTR67 LTR ERVL -361 196 80 297 259 177 13 chr20 2167742 2167900 -69985982 - MIR3 SINE MIR -19 189 6 543 280 64 13 chr20 2167985 2168142 -69985740 + MIR SINE MIR 20 184 -78 202 369 6 0 chr20 2168471 2168631 -69985251 + (CA)n Simple_repeat Simple_repeat 2 162 0 207 0 0 0 chr20 2168895 2168918 -69984964 + (TC)n Simple_repeat Simple_repeat 2 24 0 194 289 18 97 chr20 2169256 2169350 -69984532 + MIR SINE MIR 49 133 -75 975 227 80 17 chr20 2169350 2169588 -69984294 + MIR SINE MIR 2 254 -8 1232 288 107 11 chr20 2169663 2170101 -69983781 + L2 LINE L2 2834 3313 0 189 204 20 20 chr20 2170757 2170806 -69983076 - L2 LINE L2 0 3272 3224 411 317 10 0 chr20 2171048 2171152 -69982730 + L2 LINE L2 3168 3272 0 370 291 101 19 chr20 2171157 2171315 -69982567 - MIR SINE MIR -77 185 15 283 287 82 66 chr20 2171377 2171499 -69982383 + MIR3 SINE MIR 56 179 -29 393 341 36 0 chr20 2172413 2172551 -69981331 + MIR3 SINE MIR 21 163 -45 1141 223 125 19 chr20 2172561 2173037 -69980845 - MLT1G LTR MaLR -2 593 1 420 299 105 83 chr20 2173119 2173629 -69980253 + L2 LINE L2 2750 3267 -5 705 322 110 45 chr20 2174039 2174945 -69978937 - L2 LINE L2 -35 3237 2268 223 368 128 16 chr20 2175176 2175301 -69978581 + L3 LINE CR1 1422 1560 -17 236 203 68 0 chr20 2175369 2175428 -69978454 + MIR3 SINE MIR 119 181 -27 355 313 201 0 chr20 2175435 2175713 -69978169 + L2 LINE L2 1872 2205 -1109 438 20 0 0 chr20 2175921 2175972 -69977910 + (TC)n Simple_repeat Simple_repeat 2 52 0 4583 226 55 55 chr20 2176171 2176999 -69976883 + L1ME1 LINE L1 785 1612 -4794 1616 204 0 0 chr20 2176999 2177288 -69976594 + AluJo SINE Alu 1 289 -23 4583 226 55 55 chr20 2177288 2177677 -69976205 + L1ME1 LINE L1 1612 2000 -4406 2021 129 0 16 chr20 2177677 2177994 -69975888 + AluSx SINE Alu 1 312 0 4583 226 55 55 chr20 2177994 2179816 -69974066 + L1ME1 LINE L1 2000 3798 -2608 6450 159 35 9 chr20 2179839 2180182 -69973700 + Tigger3b DNA MER2_type 1 334 -2694 2348 35 3 7 chr20 2180182 2180523 -69973359 + AluY SINE Alu 1 311 0 6450 159 35 9 chr20 2180523 2180873 -69973009 + Tigger3b DNA MER2_type 334 673 -2355 2212 91 10 3 chr20 2180873 2181182 -69972700 + AluSp SINE Alu 1 311 -2 6450 159 35 9 chr20 2181182 2181687 -69972195 + Tigger3b DNA MER2_type 673 1231 0 261 167 0 0 chr20 2181708 2181762 -69972120 + (CA)n Simple_repeat Simple_repeat 1 54 0 5274 226 81 12 chr20 2181774 2183452 -69970430 + L1ME1 LINE L1 4052 5827 -599 859 286 71 15 chr20 2183461 2183800 -69970082 + L1ME1 LINE L1 6019 6376 -50 1048 209 136 33 chr20 2183840 2184171 -69969711 + HAL1b LINE L1 438 802 -546 1076 157 0 40 chr20 2184172 2184370 -69969512 + AluJo SINE Alu 84 273 -39 584 250 56 10 chr20 2184393 2184589 -69969293 + HAL1b LINE L1 792 996 -352 * 1240 194 17 35 chr20 2184580 2184868 -69969014 - L1MD3 LINE L1 -1 7994 7712 319 250 93 58 chr20 2184926 2185098 -69968784 - MLT1J LTR MaLR -331 180 3 208 385 16 0 chr20 2185140 2185262 -69968620 - L2 LINE L2 -747 2567 2444 374 175 10 97 chr20 2185379 2185482 -69968400 - MIR SINE MIR 0 262 169 340 291 0 0 chr20 2185487 2185566 -69968316 + L2 LINE L2 3219 3297 -16 265 200 0 18 chr20 2185591 2185646 -69968236 - MIR SINE MIR -112 150 97 574 286 127 55 chr20 2185804 2186098 -69967784 + L2 LINE L2 2776 3121 -192 2310 55 0 0 chr20 2186098 2186414 -69967468 - AluY SINE Alu 0 311 1 574 286 127 55 chr20 2186414 2186623 -69967259 + L2 LINE L2 3121 3313 0 191 258 0 31 chr20 2186629 2186757 -69967125 + (TGGA)n Simple_repeat Simple_repeat 4 127 0 271 287 22 44 chr20 2187355 2187491 -69966391 - L2 LINE L2 -4 3268 3136 532 239 71 92 chr20 2187508 2187747 -69966135 + MIR SINE MIR 14 247 -15 705 238 26 43 chr20 2187766 2187997 -69965885 - MIR SINE MIR -4 258 32 652 255 22 11 chr20 2188411 2188595 -69965287 - MIR SINE MIR -67 195 10 254 287 66 30 chr20 2188594 2188761 -69965121 - MIR SINE MIR -39 223 51 * 209 263 53 0 chr20 2189625 2189701 -69964181 + MER5B DNA MER1_type 52 131 -47 250 267 0 81 chr20 2189778 2189864 -69964018 + L2 LINE L2 3026 3104 -168 256 241 0 0 chr20 2190328 2190386 -69963496 + MLT1K LTR MaLR 196 253 -335 401 87 43 0 chr20 2190403 2190472 -69963410 - L1MA8 LINE L1 -2 6289 6218 462 168 32 0 chr20 2190584 2190678 -69963204 - MER2 DNA MER2_type -139 206 110 7904 158 101 20 chr20 2190678 2192223 -69961659 - MER52A LTR ERV1 0 1755 1 517 214 8 26 chr20 2192221 2192241 -69961641 - MER2 DNA MER2_type -230 115 96 * 1391 177 79 37 chr20 2192241 2192569 -69961313 + MER2 DNA MER2_type 2 343 -1 517 214 8 26 chr20 2192569 2192665 -69961217 - MER2 DNA MER2_type -249 96 1 3318 142 25 30 chr20 2192665 2193258 -69960624 - L1MA8 LINE L1 -70 6221 5632 487 297 38 71 chr20 2193334 2193600 -69960282 + MLT1K LTR MaLR 329 585 -3 1812 247 77 38 chr20 2193963 2194522 -69959360 - MLT1G LTR MaLR 0 590 10 1226 250 56 22 chr20 2194657 2195017 -69958865 - MLT1K LTR MaLR -1 587 216 813 276 99 38 chr20 2195068 2195535 -69958347 - L1ME4a LINE L1 -204 5917 5417 2330 96 0 7 chr20 2195535 2195838 -69958044 - AluSc SINE Alu -8 301 1 813 276 99 38 chr20 2195838 2195867 -69958015 - L1ME4a LINE L1 -704 5417 5391 279 198 49 49 chr20 2196590 2196671 -69957211 - MIR SINE MIR -95 167 87 270 0 0 0 chr20 2196895 2196925 -69956957 + (CA)n Simple_repeat Simple_repeat 1 30 0 601 274 87 10 chr20 2197350 2197558 -69956324 + MLT1K LTR MaLR 363 586 -2 715 312 64 11 chr20 2197706 2197988 -69955894 + HAL1 LINE L1 32 328 -2179 373 202 65 40 chr20 2198090 2198214 -69955668 + HAL1 LINE L1 615 741 -1766 880 248 103 78 chr20 2198402 2199031 -69954851 + L1MC4 LINE L1 7168 7808 0 539 248 35 0 chr20 2199080 2199221 -69954661 + MIR SINE MIR 91 236 -26 234 264 178 61 chr20 2199460 2199657 -69954225 + MLT1K LTR MaLR 62 281 -307 714 241 92 11 chr20 2200193 2200438 -69953444 + MIR SINE MIR 6 262 0 194 304 98 0 chr20 2200467 2200579 -69953303 - L2 LINE L2 -13 3259 3137 311 269 46 8 chr20 2201018 2201148 -69952734 + (TGGA)n Simple_repeat Simple_repeat 4 138 0 408 223 62 0 chr20 2201164 2201482 -69952400 + (TGGA)n Simple_repeat Simple_repeat 1 337 0 414 300 132 14 chr20 2201608 2201828 -69952054 - MIR SINE MIR 0 262 17 181 278 256 0 chr20 2201890 2201980 -69951902 - L2 LINE L2 -215 3057 2945 748 227 20 10 chr20 2202127 2202330 -69951552 - MIR SINE MIR -56 206 2 362 292 18 9 chr20 2202612 2202725 -69951157 + MIR3 SINE MIR 81 194 -14 787 255 123 13 chr20 2203294 2203529 -69950353 + MIR SINE MIR 2 262 0 589 198 16 0 chr20 2203620 2203741 -69950141 + MER5A DNA MER1_type 44 166 -23 214 224 168 37 chr20 2203813 2203920 -69949962 + MIR SINE MIR 76 196 -66 230 238 167 0 chr20 2204139 2204223 -69949659 + MIR SINE MIR 94 191 -71 334 264 66 0 chr20 2204244 2204350 -69949532 - L2 LINE L2 -21 3251 3139 1886 143 7 32 chr20 2204572 2204880 -69949002 - AluSx SINE Alu -12 300 1 185 338 38 12 chr20 2204913 2204993 -69948889 - L2 LINE L2 -544 2770 2689 2247 103 0 3 chr20 2205000 2205292 -69948590 + AluSx SINE Alu 5 295 -17 877 236 41 5 chr20 2205301 2205496 -69948386 + L1ME1 LINE L1 5471 5672 -494 1645 145 44 29 chr20 2205496 2206037 -69947845 + LTR36 LTR ERV1 1 611 0 1755 206 7 119 chr20 2206041 2206586 -69947296 + L1ME1 LINE L1 5671 6154 -12 252 241 80 9 chr20 2206633 2206745 -69947137 - L2 LINE L2 -674 2640 2521 368 316 129 0 chr20 2207296 2207451 -69946431 + MIR3 SINE MIR 13 187 -21 937 205 0 11 chr20 2207715 2207900 -69945982 + MER3 DNA MER1_type 2 184 -25 1064 247 11 127 chr20 2207942 2208469 -69945413 + LTR41 LTR ERVL 1 466 -307 1104 206 24 69 chr20 2208512 2208834 -69945048 + LTR41 LTR ERVL 468 795 0 683 317 63 59 chr20 2209158 2210086 -69943796 + ERVL LTR ERVL 412 1344 -4310 * 1585 273 16 16 chr20 2210084 2210522 -69943360 + ERVL LTR ERVL 4883 5321 -438 1705 178 7 7 chr20 2210522 2210803 -69943079 + AluJb SINE Alu 1 281 -31 1569 248 79 60 chr20 2211229 2211761 -69942121 + MLT1E LTR MaLR 1 542 -51 3783 194 49 11 chr20 2211793 2212587 -69941295 - L1MB7 LINE L1 -54 6130 5267 2234 127 3 0 chr20 2212587 2212894 -69940988 - AluSq SINE Alu -5 308 1 3783 194 49 11 chr20 2212894 2213449 -69940433 - L1MB7 LINE L1 -917 5267 4734 1003 194 60 187 chr20 2213518 2214272 -69939610 + LTR41 LTR ERVL 6 663 -110 1685 162 20 37 chr20 2214464 2214760 -69939122 - AluJo SINE Alu -21 291 1 2332 106 6 0 chr20 2214771 2215082 -69938800 - AluSq SINE Alu 0 313 1 1390 250 142 7 chr20 2215168 2215584 -69938298 - LTR16C LTR ERVL 0 491 20 244 182 45 45 chr20 2215593 2215659 -69938223 + MIR SINE MIR 112 177 -85 272 265 154 0 chr20 2215858 2215994 -69937888 - MIR SINE MIR -102 160 4 620 179 9 0 chr20 2216684 2216787 -69937095 + MLT1J1 LTR MaLR 13 116 -330 620 240 137 6 chr20 2216787 2216970 -69936912 + MER63B DNA MER1_type 1 207 -229 1014 303 17 7 chr20 2217038 2217332 -69936550 - LTR16A LTR ERVL -32 418 122 342 282 9 9 chr20 2217398 2217508 -69936374 - MIR SINE MIR -85 177 68 364 232 9 27 chr20 2217655 2217767 -69936115 - MARNA DNA Mariner -170 416 307 295 240 44 12 chr20 2217933 2218024 -69935858 + MIR SINE MIR 61 152 -61 685 282 70 25 chr20 2218041 2218282 -69935600 + MIR SINE MIR 8 259 -3 1870 259 57 18 chr20 2218392 2218887 -69934995 - MLT1G1 LTR MaLR -9 586 73 378 260 30 0 chr20 2219240 2219340 -69934542 + MIR SINE MIR 90 192 -70 416 165 89 101 chr20 2219566 2219724 -69934158 + L1ME4a LINE L1 5955 6110 -11 324 70 0 0 chr20 2219726 2219769 -69934113 + (CA)n Simple_repeat Simple_repeat 2 44 0 316 269 112 14 chr20 2219842 2219994 -69933888 - MER20B DNA MER1_type 0 219 53 295 283 173 37 chr20 2219996 2220187 -69933695 + L1MC4 LINE L1 7800 8016 -26 2404 65 0 14 chr20 2220864 2221156 -69932726 + AluY SINE Alu 1 288 -23 252 185 0 19 chr20 2221160 2221214 -69932668 - L2 LINE L2 -13 3259 3207 1972 232 23 0 chr20 2221449 2221876 -69932006 + MER110 LTR ERV1 46 482 -9 301 276 163 0 chr20 2221890 2222013 -69931869 - MIR SINE MIR -23 239 97 5874 101 3 27 chr20 2222013 2222160 -69931722 + L1PA11 LINE L1 5329 5478 -696 1459 214 3 35 chr20 2222160 2222478 -69931404 + AluJb SINE Alu 1 308 -4 5874 101 3 27 chr20 2222478 2223189 -69930693 + L1PA11 LINE L1 5478 6167 -7 328 250 0 0 chr20 2223189 2223273 -69930609 - MIR SINE MIR -163 99 16 1690 251 135 15 chr20 2223295 2223820 -69930062 - MLT1G1 LTR MaLR -7 588 1 580 296 97 8 chr20 2224026 2224448 -69929434 + LTR33 LTR ERVL 19 521 0 251 346 0 12 chr20 2224539 2224620 -69929262 - L2 LINE L2 -211 3061 2982 356 175 32 0 chr20 2224647 2224710 -69929172 - MIR SINE MIR -67 141 77 1213 209 106 9 chr20 2224915 2225236 -69928646 + L1ME3 LINE L1 4497 4848 -1298 1720 158 17 31 chr20 2225355 2225647 -69928235 + AluJo SINE Alu 12 299 -13 478 247 67 3 chr20 2225648 2225843 -69928039 + L1ME3 LINE L1 5771 5979 -183 2940 147 33 0 chr20 2225847 2226338 -69927544 + L1MB2 LINE L1 5319 5825 -346 5189 53 0 3 chr20 2226340 2226979 -69926903 + L1PA8 LINE L1 5536 6172 0 1890 161 14 11 chr20 2226979 2227326 -69926556 + L1MB2 LINE L1 5821 6169 -2 823 176 12 18 chr20 2227368 2227533 -69926349 + L1ME3 LINE L1 5998 6161 -1 670 277 106 25 chr20 2227546 2227828 -69926054 - MLT1L LTR MaLR -153 462 158 2085 113 7 0 chr20 2227885 2228215 -69925667 - AluSx SINE Alu 0 332 1 2305 88 3 3 chr20 2228715 2229010 -69924872 - AluSc SINE Alu -14 295 1 332 259 75 58 chr20 2229015 2229189 -69924693 - MER5B DNA MER1_type -1 177 1 2126 99 8 74 chr20 2229414 2229767 -69924115 + MER1B DNA MER1_type 1 330 -9 621 241 128 5 chr20 2229768 2229955 -69923927 + MLT1L LTR MaLR 400 609 -6 1310 191 40 20 chr20 2229959 2230211 -69923671 - AluJo SINE Alu -54 258 2 23 54 0 0 chr20 2230270 2230307 -69923575 + AT_rich Low_complexity Low_complexity 1 37 0 2136 139 0 0 chr20 2230385 2230680 -69923202 + AluSx SINE Alu 1 295 -17 888 245 64 19 chr20 2231303 2231568 -69922314 - L1ME4a LINE L1 -296 5825 5549 1074 149 11 0 chr20 2232121 2232302 -69921580 + L1MB3 LINE L1 6001 6183 0 11684 176 46 56 chr20 2232316 2234552 -69919330 + L1MC1 LINE L1 19 2276 -4150 2254 165 41 10 chr20 2234552 2234965 -69918917 - MSTA LTR MaLR 0 428 3 11684 176 46 56 chr20 2234965 2235185 -69918697 + L1MC1 LINE L1 2276 2497 -3929 2316 97 3 3 chr20 2235185 2235485 -69918397 + AluSg SINE Alu 2 301 -9 11684 176 46 56 chr20 2235485 2235635 -69918247 + L1MC1 LINE L1 2497 2647 -3779 2215 118 0 3 chr20 2235635 2235932 -69917950 + AluSc SINE Alu 1 296 -13 11684 176 46 56 chr20 2235932 2236124 -69917758 + L1MC1 LINE L1 2647 2839 -3587 2011 155 7 0 chr20 2236124 2236434 -69917448 + AluJo SINE Alu 1 312 0 11684 176 46 56 chr20 2236434 2236705 -69917177 + L1MC1 LINE L1 2839 3111 -3315 2304 104 3 0 chr20 2236705 2237002 -69916880 + AluSp SINE Alu 1 298 -15 11684 176 46 56 chr20 2237002 2237276 -69916606 + L1MC1 LINE L1 3111 3386 -3040 2162 137 0 3 chr20 2237276 2237583 -69916299 + AluSx SINE Alu 1 306 -6 11684 176 46 56 chr20 2237583 2237786 -69916096 + L1MC1 LINE L1 3386 3590 -2836 2216 112 0 7 chr20 2237786 2238089 -69915793 + AluSg SINE Alu 1 301 -9 11684 176 46 56 chr20 2238089 2238430 -69915452 + L1MC1 LINE L1 3590 3853 -2573 1714 168 0 30 chr20 2238440 2238920 -69914962 + AluJo SINE Alu 7 477 0 1637 223 216 59 chr20 2238955 2239367 -69914515 + L1MC1 LINE L1 3843 4189 -2237 816 161 23 0 chr20 2239367 2239497 -69914385 + FLAM_A SINE Alu 1 133 0 1637 223 216 59 chr20 2239497 2240072 -69913810 + L1MC1 LINE L1 4189 4985 -1441 235 229 16 0 chr20 2240085 2240146 -69913736 + L1MC1 LINE L1 4961 5022 -1404 542 138 0 0 chr20 2240163 2240243 -69913639 + FRAM SINE Alu 35 114 -62 315 0 0 0 chr20 2240592 2240627 -69913255 + (CA)n Simple_repeat Simple_repeat 2 36 0 6442 171 16 28 chr20 2240630 2242235 -69911647 + L1MC1 LINE L1 5023 6613 0 561 30 0 0 chr20 2242275 2242342 -69911540 + (TA)n Simple_repeat Simple_repeat 1 67 0 1287 107 6 0 chr20 2242342 2242520 -69911362 - AluSq SINE Alu -1 312 134 2271 48 25 67 chr20 2242520 2242835 -69911047 - AluY SINE Alu -9 302 1 2296 111 0 0 chr20 2242974 2243280 -69910602 + AluSg SINE Alu 1 306 -4 342 307 24 8 chr20 2243596 2243723 -69910159 - LTR67 LTR ERVL -2 555 427 248 291 45 55 chr20 2243825 2243935 -69909947 + LTR16C LTR ERVL 87 195 -296 598 267 46 20 chr20 2243977 2244172 -69909710 + LTR16C LTR ERVL 284 483 -8 526 292 36 105 chr20 2244174 2244612 -69909270 - LTR67 LTR ERVL -126 431 24 336 368 23 18 chr20 2245129 2245300 -69908582 - L2 LINE L2 -214 3058 2887 589 292 103 80 chr20 2245554 2246263 -69907619 - HAL1 LINE L1 -1606 901 177 319 137 0 95 chr20 2246424 2246519 -69907363 + L1MB2 LINE L1 6082 6167 -4 819 201 0 0 chr20 2246706 2246850 -69907032 + MER5A DNA MER1_type 9 152 -37 462 303 31 6 chr20 2247021 2247183 -69906699 - MIR SINE MIR -5 257 92 2352 98 0 0 chr20 2247252 2247547 -69906335 - AluSc SINE Alu -14 295 1 211 296 31 31 chr20 2247619 2247717 -69906165 + L2 LINE L2 2979 3076 -196 4998 180 67 22 chr20 2247805 2247917 -69905965 + L1MD2 LINE L1 4921 5027 -1332 1734 173 3 26 chr20 2247917 2248224 -69905658 - AluJo SINE Alu -12 300 1 4998 180 67 22 chr20 2248224 2248666 -69905216 + L1MD2 LINE L1 5027 5448 -911 2350 99 0 0 chr20 2248666 2248959 -69904923 + AluSx SINE Alu 1 293 -19 4998 180 67 22 chr20 2248959 2249679 -69904203 + L1MD2 LINE L1 5448 6252 -107 401 113 32 0 chr20 2249718 2249780 -69904102 + L1MC/D LINE L1 5504 5567 -675 521 105 47 0 chr20 2249785 2249871 -69904011 + L1MD2 LINE L1 6266 6355 -4 1688 168 67 101 chr20 2249872 2250186 -69903696 - Charlie1b DNA MER1_type -2289 472 178 1334 184 21 0 chr20 2250186 2250420 -69903462 - MER8 DNA MER2_type 0 239 1 1688 168 67 101 chr20 2250420 2250581 -69903301 - Charlie1b DNA MER1_type -2583 178 13 210 178 22 0 chr20 2250640 2250685 -69903197 + L2 LINE L2 3188 3233 -39 213 132 0 0 chr20 2250687 2250725 -69903157 + (GA)n Simple_repeat Simple_repeat 2 39 0 727 313 144 18 chr20 2251543 2251882 -69902000 - MLT1J LTR MaLR -31 480 99 802 144 83 72 chr20 2252091 2252215 -69901667 - MER5A DNA MER1_type 0 189 61 2251 105 13 3 chr20 2252215 2252521 -69901361 - AluSc SINE Alu 0 309 1 802 144 83 72 chr20 2252521 2252577 -69901305 - MER5A DNA MER1_type -128 61 7 807 269 96 15 chr20 2252975 2253310 -69900572 + L1MC4a LINE L1 5455 5816 -1992 250 241 0 72 chr20 2253397 2253480 -69900402 + L1MC4a LINE L1 6057 6133 -1675 282 255 217 0 chr20 2253522 2253628 -69900254 - MIR SINE MIR -37 225 97 749 232 24 6 chr20 2253648 2253812 -69900070 + MER63A DNA MER1_type 39 205 -5 368 254 55 9 chr20 2254257 2254367 -69899515 + MIR SINE MIR 36 150 -112 2152 116 30 3 chr20 2254420 2254721 -69899161 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr20 2255369 2255391 -69898491 + AT_rich Low_complexity Low_complexity 1 22 0 2470 78 0 13 chr20 2255712 2256021 -69897861 - AluSx SINE Alu -7 305 1 569 223 157 6 chr20 2256022 2256188 -69897694 + MIR SINE MIR 72 262 0 270 328 141 8 chr20 2256205 2256333 -69897549 + L2 LINE L2 3119 3263 -9 204 271 0 0 chr20 2256597 2256645 -69897237 + L2 LINE L2 3266 3313 0 603 272 59 25 chr20 2256895 2257134 -69896748 + MIR SINE MIR 15 261 -1 443 244 80 63 chr20 2257292 2257341 -69896541 - L1ME LINE L1 -352 5769 5722 189 0 0 0 chr20 2257341 2257362 -69896520 + (TA)n Simple_repeat Simple_repeat 2 22 0 443 244 80 63 chr20 2257362 2257550 -69896332 - L1ME LINE L1 -399 5722 5528 237 269 15 0 chr20 2257971 2258038 -69895844 - MER113 DNA MER1_type? 0 521 454 1051 200 130 82 chr20 2258139 2258639 -69895243 - HAL1 LINE L1 -4 2503 1980 787 211 5 52 chr20 2258708 2258902 -69894980 + MER5A DNA MER1_type 2 186 -3 324 357 23 29 chr20 2258908 2259018 -69894864 + MIR SINE MIR 12 122 -140 1909 153 7 0 chr20 2259018 2259312 -69894570 - AluSx SINE Alu -16 296 1 324 357 23 29 chr20 2259312 2259372 -69894510 + MIR SINE MIR 122 181 -81 211 133 0 0 chr20 2260043 2260073 -69893809 + L2 LINE L2 3222 3251 -21 585 273 134 34 chr20 2260081 2260374 -69893508 + L2 LINE L2 2782 3044 -269 2394 95 3 0 chr20 2260374 2260678 -69893204 - AluSp SINE Alu -8 305 1 585 273 134 34 chr20 2260678 2260879 -69893003 + L2 LINE L2 3044 3311 -2 1974 136 3 32 chr20 2261053 2261361 -69892521 + AluSx SINE Alu 1 299 -13 361 212 195 0 chr20 2261601 2261719 -69892163 + MIR SINE MIR 120 260 -2 1716 119 50 26 chr20 2261905 2262207 -69891675 + L1PA16 LINE L1 5849 6157 -9 1475 128 144 4 chr20 2262223 2262473 -69891409 + AluJb SINE Alu 1 285 -17 22 35 0 0 chr20 2262710 2262739 -69891143 + AT_rich Low_complexity Low_complexity 1 29 0 481 245 98 0 chr20 2262768 2262911 -69890971 - L1ME2 LINE L1 -114 6050 5894 1777 220 89 55 chr20 2262927 2263532 -69890350 - L1ME1 LINE L1 -5 6161 5536 291 346 55 0 chr20 2263546 2263673 -69890209 + L2 LINE L2 2912 3045 -268 737 112 16 48 chr20 2263673 2263798 -69890084 + MLT1B LTR MaLR 1 121 -269 4723 108 21 16 chr20 2263802 2264565 -69889317 + L1 LINE L1 3870 4636 -1510 1314 210 45 13 chr20 2264589 2264899 -69888983 + L1MC4 LINE L1 7165 7484 -558 1806 169 51 30 chr20 2264944 2265377 -69888505 + L1MC4 LINE L1 7470 7911 -131 246 105 18 73 chr20 2265378 2265443 -69888439 - L1M1 LINE L1 -603 5702 5641 231 250 70 23 chr20 2265477 2265605 -69888277 + L1MC4 LINE L1 7903 8036 -6 230 241 17 0 chr20 2265796 2265854 -69888028 - MIR SINE MIR -122 140 82 369 300 50 8 chr20 2265860 2265980 -69887902 + L2 LINE L2 3179 3303 -10 253 278 2 64 chr20 2266148 2266279 -69887603 - MIR SINE MIR -52 156 33 23 0 0 0 chr20 2267661 2267684 -69886198 + GC_rich Low_complexity Low_complexity 1 23 0 1828 156 0 13 chr20 2269565 2269867 -69884015 + AluJb SINE Alu 1 298 -14 248 305 130 19 chr20 2270182 2270336 -69883546 + MIR SINE MIR 2 172 -90 272 254 0 0 chr20 2270931 2270990 -69882892 - MIR3 SINE MIR -17 191 133 235 382 76 8 chr20 2271544 2271675 -69882207 - MIR3 SINE MIR -29 179 40 520 296 25 6 chr20 2272669 2272831 -69881051 - MIR SINE MIR -96 166 2 2224 97 7 3 chr20 2272921 2273220 -69880662 + AluSx SINE Alu 1 300 -12 281 349 72 12 chr20 2274150 2274316 -69879566 - MIR SINE MIR -70 192 17 294 306 82 14 chr20 2274404 2274551 -69879331 - MIR SINE MIR -36 226 70 230 222 37 0 chr20 2275621 2275675 -69878207 + MIR SINE MIR 92 147 -115 248 267 151 20 chr20 2275930 2276076 -69877806 + MER104 DNA Tc2 4 168 -12 1640 161 20 26 chr20 2276107 2276412 -69877470 + AluJo SINE Alu 1 303 -9 187 256 36 88 chr20 2277218 2277355 -69876527 + MIR3 SINE MIR 14 143 -65 1419 218 45 16 chr20 2277609 2277917 -69875965 - ERVL LTR ERVL -3552 2212 1896 24 32 0 0 chr20 2278026 2278057 -69875825 + AT_rich Low_complexity Low_complexity 1 31 0 199 239 0 0 chr20 2278562 2278608 -69875274 - MIR SINE MIR -78 130 85 211 365 0 14 chr20 2278662 2278736 -69875146 - MIR SINE MIR -120 88 16 685 181 0 0 chr20 2279029 2279145 -69874737 + FRAM SINE Alu 38 153 -23 2081 129 0 29 chr20 2282130 2282439 -69871443 - AluSx SINE Alu -12 300 1 198 229 0 21 chr20 2282610 2282658 -69871224 - L2 LINE L2 -212 3060 3014 386 250 122 11 chr20 2282832 2283020 -69870862 - L1ME4a LINE L1 -237 5884 5676 2111 56 0 8 chr20 2283039 2283290 -69870592 + AluY SINE Alu 47 295 -16 1561 117 20 137 chr20 2283318 2283712 -69870170 + MER7A DNA MER2_type 1 346 0 186 379 11 11 chr20 2283714 2283801 -69870081 - L2 LINE L2 -50 3222 3136 1662 239 195 31 chr20 2285365 2286626 -69867256 - L2 LINE L2 0 3313 1791 462 216 60 0 chr20 2286626 2286742 -69867140 - Charlie1 DNA MER1_type 0 2761 2639 1939 138 7 7 chr20 2286744 2287041 -69866841 + AluSx SINE Alu 1 297 -15 373 298 21 7 chr20 2287242 2287383 -69866499 + MIR SINE MIR 50 192 -70 310 260 104 0 chr20 2288693 2288789 -69865093 - MIR SINE MIR -155 107 2 659 193 139 6 chr20 2292739 2292905 -69860977 + MER5A DNA MER1_type 1 188 -1 2081 96 59 0 chr20 2293546 2293817 -69860065 - AluSc SINE Alu -22 287 1 196 211 0 0 chr20 2293874 2293912 -69859970 - L2 LINE L2 -9 3263 3226 189 394 56 0 chr20 2293964 2294106 -69859776 + MIR SINE MIR 107 256 -6 304 161 32 0 chr20 2294432 2294494 -69859388 - L2 LINE L2 -252 3061 2998 357 293 160 26 chr20 2294567 2294874 -69859008 - L2 LINE L2 -625 2689 2342 2391 99 108 214 chr20 2295737 2296026 -69857856 - Tigger3(Golem) DNA MER2_type -3 3026 2708 812 153 0 8 chr20 2296026 2296150 -69857732 + FLAM_C SINE Alu 1 123 -20 2391 99 108 214 chr20 2296150 2296430 -69857452 - Tigger3(Golem) DNA MER2_type -321 2708 2433 588 211 75 14 chr20 2296430 2296577 -69857305 - FAM SINE Alu -19 156 1 2391 99 108 214 chr20 2296577 2296709 -69857173 - Tigger3(Golem) DNA MER2_type -596 2433 2289 211 353 0 12 chr20 2296785 2296870 -69857012 - MIR SINE MIR -91 117 34 367 270 70 0 chr20 2297469 2297569 -69856313 + MIR SINE MIR 30 136 -72 1327 92 0 0 chr20 2298808 2298972 -69854910 + AluSg/x SINE Alu 137 300 -12 235 241 69 35 chr20 2299035 2299122 -69854760 - L3 LINE CR1 -189 1388 1299 2506 79 0 0 chr20 2299303 2299606 -69854276 + AluSx SINE Alu 1 303 -9 1887 108 58 0 chr20 2300275 2300535 -69853347 + AluSx SINE Alu 1 275 -37 918 182 45 0 chr20 2300544 2300698 -69853184 + AluJb SINE Alu 132 292 -20 267 298 91 8 chr20 2301087 2301208 -69852674 + MIR SINE MIR 5 135 -127 184 267 67 0 chr20 2301937 2301997 -69851885 - MIR SINE MIR -58 150 87 268 79 0 0 chr20 2302685 2302723 -69851159 + MIR SINE MIR 113 150 -112 342 325 145 5 chr20 2303062 2303262 -69850620 - MIR SINE MIR -15 247 20 1836 146 7 42 chr20 2303429 2303738 -69850144 + AluJo SINE Alu 1 298 -14 584 280 87 34 chr20 2304208 2304415 -69849467 + MIR SINE MIR 17 234 -28 218 274 73 81 chr20 2304683 2304807 -69849075 + MIR SINE MIR 21 141 -67 274 309 178 34 chr20 2306360 2306771 -69847111 - L1ME4a LINE L1 -123 5998 5529 1693 143 0 4 chr20 2307212 2307457 -69846425 + AluJo SINE Alu 45 288 -24 300 271 305 20 chr20 2307681 2307884 -69845998 - MIR SINE MIR 0 262 2 186 250 117 0 chr20 2307983 2308043 -69845839 + MIR SINE MIR 113 179 -83 432 225 101 14 chr20 2308205 2308343 -69845539 + MIR SINE MIR 33 182 -80 240 224 0 0 chr20 2308614 2308681 -69845201 + T-rich Low_complexity Low_complexity 1 67 0 202 322 33 41 chr20 2313406 2313527 -69840355 - MIR SINE MIR -116 146 27 228 281 233 14 chr20 2314038 2314184 -69839698 + MIR SINE MIR 67 244 -18 488 182 71 0 chr20 2314607 2314706 -69839176 - L1MB7 LINE L1 -43 6141 6036 411 167 0 0 chr20 2414708 2414774 -69739108 + AluSp/q SINE Alu 234 299 -14 204 274 43 60 chr20 2415243 2415360 -69738522 + MIR SINE MIR 148 262 0 189 213 0 0 chr20 2416186 2416233 -69737649 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 506 330 132 26 chr20 2416263 2416611 -69737271 - L2 LINE L2 -81 3232 2848 211 336 44 9 chr20 2416660 2416773 -69737109 - MIR3 SINE MIR -54 154 38 2145 123 13 25 chr20 2417144 2417460 -69736422 - AluSx SINE Alu 0 312 1 448 222 21 56 chr20 2417499 2417643 -69736239 + L1MC/D LINE L1 5658 5796 -2012 898 260 22 5 chr20 2417643 2417866 -69736016 + MIR SINE MIR 36 262 0 1549 117 0 14 chr20 2418195 2418409 -69735473 - AluSg/x SINE Alu -17 293 83 827 149 0 0 chr20 2418409 2418523 -69735359 - AluSp SINE Alu -63 250 137 276 276 81 8 chr20 2419363 2419486 -69734396 - MIR3 SINE MIR -26 182 51 392 277 69 75 chr20 2420150 2420338 -69733544 - MIR SINE MIR -4 258 72 1002 221 41 156 chr20 2420648 2421277 -69732605 + MLT1G LTR MaLR 34 590 0 189 214 36 0 chr20 2421701 2421757 -69732125 + L2 LINE L2 2716 2773 -541 661 251 25 6 chr20 2421767 2421930 -69731952 + Charlie8 DNA MER1_type 11 176 -2241 902 165 74 0 chr20 2422357 2422533 -69731349 + MER5A DNA MER1_type 1 189 0 2464 93 3 0 chr20 2423207 2423517 -69730365 - AluSp SINE Alu -2 311 1 477 254 164 0 chr20 2423590 2423755 -69730127 - MIR SINE MIR -57 205 14 1910 146 0 14 chr20 2425096 2425408 -69728474 - AluSx SINE Alu 0 308 1 2485 226 30 41 chr20 2425413 2425593 -69728289 + MER82 DNA MER2_type 23 203 -450 1866 112 35 18 chr20 2425593 2425878 -69728004 + AluSx SINE Alu 5 294 -18 2485 226 30 41 chr20 2425878 2426335 -69727547 + MER82 DNA MER2_type 203 653 0 420 323 125 0 chr20 2426412 2426506 -69727376 + MIR SINE MIR 1 82 -180 1719 165 39 4 chr20 2426506 2426785 -69727097 - AluJb SINE Alu -23 289 1 420 323 125 0 chr20 2426785 2426922 -69726960 + MIR SINE MIR 82 261 -1 297 339 0 35 chr20 2427181 2427296 -69726586 - L2 LINE L2 -37 3276 3166 289 379 16 0 chr20 2427600 2427724 -69726158 - L2 LINE L2 -527 2787 2662 1385 258 79 22 chr20 2428266 2428898 -69724984 + L2 LINE L2 2642 3313 0 314 239 110 9 chr20 2428904 2429013 -69724869 - MIR SINE MIR -130 132 13 250 272 58 10 chr20 2429086 2429186 -69724696 + MER112 DNA MER1_type 56 160 -100 1867 235 17 34 chr20 2429186 2429662 -69724220 - MER90 LTR ERV1 0 614 147 517 241 82 10 chr20 2429653 2429860 -69724022 + MER20B DNA MER1_type 524 745 -38 * 1763 249 72 77 chr20 2429894 2430492 -69723390 - MLT1F LTR MaLR 0 542 1 572 262 30 69 chr20 2430630 2430792 -69723090 - MIR SINE MIR -13 249 95 765 164 0 15 chr20 2430792 2430926 -69722956 - FLAM_C SINE Alu -1 132 1 572 262 30 69 chr20 2430926 2430965 -69722917 - MIR SINE MIR -167 95 56 2072 224 111 9 chr20 2431188 2431728 -69722154 + MLT1G1 LTR MaLR 1 595 0 203 206 87 127 chr20 2432238 2432364 -69721518 - MIR3 SINE MIR -4 204 84 297 323 164 35 chr20 2432723 2432949 -69720933 - L3 LINE CR1 -29 1548 1294 535 319 32 0 chr20 2433454 2433611 -69720271 + L2 LINE L2 3111 3272 0 182 118 59 0 chr20 2433896 2433930 -69719952 + MIR SINE MIR 109 144 -64 185 315 39 55 chr20 2434249 2434376 -69719506 - L3 LINE CR1 -32 1545 1421 576 321 80 13 chr20 2434693 2434930 -69718952 + MIR SINE MIR 9 261 -1 283 293 154 8 chr20 2434988 2435111 -69718771 + MIR SINE MIR 58 198 -64 310 296 10 0 chr20 2435119 2435217 -69718665 + MER94 DNA DNA 1 99 -35 2507 76 0 0 chr20 2435288 2435590 -69718292 - AluY SINE Alu -9 302 1 229 239 104 15 chr20 2435763 2435830 -69718052 - MIR3 SINE MIR -49 159 87 464 274 68 7 chr20 2436490 2436636 -69717246 + MER117 DNA MER1_type 6 160 -37 180 270 243 0 chr20 2436834 2436908 -69716974 - MIR3 SINE MIR -54 154 63 1931 158 0 3 chr20 2437484 2437781 -69716101 - AluJb SINE Alu -16 296 1 400 274 9 0 chr20 2437850 2437963 -69715919 - MIR SINE MIR -70 192 79 364 333 18 0 chr20 2439181 2439295 -69714587 + MIR3 SINE MIR 86 201 -7 2161 112 10 10 chr20 2439974 2440268 -69713614 - AluSx SINE Alu -18 294 1 554 202 118 22 chr20 2440276 2440454 -69713428 + MIR3 SINE MIR 12 206 -2 483 350 101 28 chr20 2440655 2440766 -69713116 - L1ME4a LINE L1 -160 5961 5859 2008 103 11 29 chr20 2440766 2441047 -69712835 - AluY SINE Alu -13 298 23 483 350 101 28 chr20 2441047 2441252 -69712630 - L1ME4a LINE L1 -262 5859 5622 557 268 87 42 chr20 2441270 2441535 -69712347 + L1MC4a LINE L1 5621 5897 -1911 26 0 0 0 chr20 2441628 2441654 -69712228 + AT_rich Low_complexity Low_complexity 1 26 0 716 155 39 16 chr20 2441657 2441786 -69712096 + FLAM_A SINE Alu 1 132 -1 208 230 58 58 chr20 2441859 2441946 -69711936 + L2 LINE L2 2720 2806 -508 2183 104 0 0 chr20 2441956 2442254 -69711628 - AluSq SINE Alu -15 298 1 1036 207 78 0 chr20 2442548 2442765 -69711117 + MIR SINE MIR 29 262 0 335 256 61 0 chr20 2442765 2442847 -69711035 + L1ME4a LINE L1 6035 6121 0 1830 107 52 21 chr20 2443327 2443616 -69710266 - AluSx SINE Alu -14 298 1 30 27 0 0 chr20 2443618 2443655 -69710227 + AT_rich Low_complexity Low_complexity 1 37 0 1768 156 17 61 chr20 2443785 2444195 -69709687 + Charlie1b DNA MER1_type 132 523 0 206 221 11 5 chr20 2444589 2444656 -69709226 + MIR SINE MIR 100 166 -65 1239 179 0 41 chr20 2445552 2445798 -69708084 - AluJo SINE Alu -76 236 1 826 195 40 40 chr20 2445981 2446181 -69707701 + L1ME2 LINE L1 5946 6145 -19 316 248 35 106 chr20 2446233 2446459 -69707423 + L1MC4 LINE L1 7832 8041 -1 849 152 0 8 chr20 2446528 2446660 -69707222 - FLAM_A SINE Alu -2 131 1 318 355 6 6 chr20 2446671 2446837 -69707045 + LTR67 LTR ERVL 36 201 -356 503 312 5 24 chr20 2447701 2447919 -69705963 - MIR SINE MIR -8 254 7 4412 235 56 119 chr20 2448770 2449436 -69704446 + HAL1 LINE L1 120 827 -1680 1541 183 20 7 chr20 2449436 2449742 -69704140 - AluJo SINE Alu -2 310 1 4412 235 56 119 chr20 2449742 2451488 -69702394 + HAL1 LINE L1 827 2379 -128 276 174 0 0 chr20 2451503 2451549 -69702333 - MLT1E3 LTR MaLR -19 605 560 2306 192 50 52 chr20 2451562 2452145 -69701737 + L1MB5 LINE L1 5586 6167 -7 2056 100 28 3 chr20 2452328 2452617 -69701265 - AluSq SINE Alu -17 296 1 1222 230 108 49 chr20 2452829 2453334 -69700548 - MLT1E3 LTR MaLR -51 573 29 1574 211 133 42 chr20 2453334 2453375 -69700507 - MLT2B1 LTR ERVL 0 520 484 234 0 0 0 chr20 2453375 2453401 -69700481 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1574 211 133 42 chr20 2453401 2453834 -69700048 - MLT2B1 LTR ERVL -36 484 3 1222 230 108 49 chr20 2453834 2453862 -69700020 - MLT1E3 LTR MaLR -595 29 4 734 330 48 22 chr20 2453991 2454264 -69699618 + MER115 DNA AcHobo 90 369 -324 2477 176 28 35 chr20 2454264 2454579 -69699303 - L1MD2 LINE L1 0 6359 6048 2312 84 0 0 chr20 2454579 2454878 -69699004 - AluY SINE Alu -12 299 1 2477 176 28 35 chr20 2454878 2455107 -69698775 - L1MD2 LINE L1 -311 6048 5819 1719 214 43 0 chr20 2455107 2455481 -69698401 + L1MD1 LINE L1 5494 5883 -359 207 0 0 0 chr20 2455499 2455522 -69698360 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1161 227 52 0 chr20 2455559 2455810 -69698072 - L1MDb LINE L1 -6138 271 8 652 279 61 39 chr20 2455842 2456122 -69697760 + MER115 DNA AcHobo 407 692 -1 1629 167 13 23 chr20 2456237 2456537 -69697345 + AluJo SINE Alu 1 297 -15 10189 157 71 8 chr20 2456732 2458721 -69695161 + L1M4c LINE L1 2 2211 -4173 1466 177 0 4 chr20 2458723 2458994 -69694888 + L1MB3 LINE L1 5912 6181 -2 524 144 29 93 chr20 2459026 2459102 -69694780 + L1ME3 LINE L1 6030 6095 -67 6473 98 7 2 chr20 2459102 2460719 -69693163 + L1PA15 LINE L1 4528 6165 0 524 144 29 93 chr20 2460719 2460781 -69693101 + L1ME3 LINE L1 6095 6159 -3 512 310 179 14 chr20 2461525 2461877 -69692005 + L2 LINE L2 2140 2549 -765 816 286 97 19 chr20 2462052 2462423 -69691459 - LTR16C LTR ERVL 0 491 92 838 275 36 18 chr20 2462833 2463219 -69690663 - L1M4c LINE L1 -3989 2657 2265 1509 134 14 28 chr20 2463251 2463534 -69690348 - L1MB3 LINE L1 -1 6182 5904 2927 180 82 15 chr20 2463538 2464326 -69689556 - L1MB3 LINE L1 -590 5593 4724 2723 252 98 29 chr20 2464316 2466208 -69687674 - L1M4c LINE L1 -4495 2151 48 * 458 225 1 25 chr20 2466261 2466395 -69687487 - L1MC5 LINE L1 0 8042 7808 2100 106 3 26 chr20 2466514 2466825 -69687057 - AluSx SINE Alu -4 308 5 192 195 0 24 chr20 2467146 2467187 -69686695 - MER5A DNA MER1_type -114 75 36 944 0 0 9 chr20 2467214 2467327 -69686555 - AluY SINE Alu -2 309 198 1043 218 36 18 chr20 2467764 2467984 -69685898 - MIR SINE MIR 0 262 39 244 239 14 42 chr20 2468212 2468283 -69685599 - MER5A DNA MER1_type -84 105 37 * 298 284 0 14 chr20 2468228 2468302 -69685580 + MER5A DNA MER1_type 111 183 -6 278 275 34 98 chr20 2468415 2468651 -69685231 - MLT1J LTR MaLR -24 487 267 362 336 39 0 chr20 2468658 2468786 -69685096 + LTR67 LTR ERVL 110 242 -315 227 289 11 116 chr20 2468849 2469039 -69684843 + LTR67 LTR ERVL 362 531 -26 408 278 156 23 chr20 2469155 2469328 -69684554 + L2 LINE L2 3118 3313 0 1301 270 137 35 chr20 2469749 2470092 -69683790 - MLT1G1 LTR MaLR 0 595 176 531 0 0 0 chr20 2470092 2470151 -69683731 + (GA)n Simple_repeat Simple_repeat 1 59 0 1301 270 137 35 chr20 2470151 2470347 -69683535 - MLT1G1 LTR MaLR -419 176 1 1090 254 194 12 chr20 2470871 2471506 -69682376 + L2 LINE L2 2432 3189 -124 1207 95 0 0 chr20 2471809 2471977 -69681905 + AluY SINE Alu 131 298 -13 234 247 86 12 chr20 2472738 2472819 -69681063 + MIR SINE MIR 111 197 -65 846 229 106 4 chr20 2473188 2473424 -69680458 + MIR SINE MIR 1 260 -2 274 330 26 110 chr20 2473498 2473771 -69680111 - L2 LINE L2 -25 3247 2998 291 247 215 0 chr20 2473821 2473914 -69679968 - MLT1H LTR MaLR -16 533 421 1702 225 85 44 chr20 2473921 2474044 -69679838 - L1MEc LINE L1 -2649 3566 3450 1693 163 48 0 chr20 2474044 2474338 -69679544 - AluJb SINE Alu -4 308 1 1702 225 85 44 chr20 2474338 2474610 -69679272 - L1MEc LINE L1 -2765 3450 3191 2117 111 3 0 chr20 2474610 2474917 -69678965 - AluSp SINE Alu -5 308 1 1702 225 85 44 chr20 2474917 2475250 -69678632 - L1MEc LINE L1 -3024 3191 2807 * 1737 231 66 11 chr20 2475243 2475667 -69678215 - L1MEc LINE L1 -3873 2523 2124 2021 143 0 0 chr20 2475667 2475974 -69677908 - AluSx SINE Alu -5 307 1 1881 166 3 6 chr20 2475977 2476290 -69677592 - AluSx SINE Alu 0 312 1 1737 231 66 11 chr20 2476290 2476485 -69677397 - L1MEc LINE L1 -4273 2123 1866 2471 282 35 27 chr20 2476485 2477254 -69676628 - HERV16 LTR ERVL -3667 1329 555 648 165 0 19 chr20 2477339 2477442 -69676440 - FRAM SINE Alu -16 160 60 414 212 278 10 chr20 2478068 2478266 -69675616 - L3 LINE CR1 -115 1462 1212 817 165 0 0 chr20 2479934 2480061 -69673821 - FLAM_C SINE Alu -16 127 1 192 351 36 0 chr20 2480214 2480325 -69673557 - L3 LINE CR1 -379 1198 1084 259 223 146 29 chr20 2480472 2480575 -69673307 + MIR3 SINE MIR 67 181 -27 212 269 51 13 chr20 2480735 2480813 -69673069 - MIR SINE MIR -119 143 63 2175 85 7 3 chr20 2481684 2481979 -69671903 - AluSx SINE Alu -16 296 1 432 288 85 42 chr20 2482290 2482526 -69671356 - L2 LINE L2 -44 3269 3024 276 338 58 19 chr20 2482523 2482677 -69671205 - MIR SINE MIR -90 172 13 * 245 323 219 0 chr20 2483450 2483605 -69670277 + MIR3 SINE MIR 20 208 0 917 106 8 0 chr20 2484621 2484753 -69669129 - FLAM_C SINE Alu -10 133 1 227 309 111 25 chr20 2485492 2485654 -69668228 - MIR3 SINE MIR -29 179 4 1693 130 41 54 chr20 2485720 2486036 -69667846 + AluJo SINE Alu 1 312 0 311 270 53 112 chr20 2486616 2486768 -69667114 + MIR SINE MIR 1 143 -65 2169 110 0 22 chr20 2488373 2488692 -69665190 - AluSx SINE Alu 0 312 1 553 315 104 14 chr20 2489560 2489782 -69664100 - MIR SINE MIR -13 249 8 252 318 11 11 chr20 2489842 2489930 -69663952 + L2 LINE L2 3184 3271 -1 428 315 103 5 chr20 2490312 2490496 -69663386 + MARNA DNA Mariner 301 502 -84 189 0 0 0 chr20 2491771 2491792 -69662090 + (TAGA)n Simple_repeat Simple_repeat 1 21 0 569 181 66 163 chr20 2491794 2491916 -69661966 + MER112 DNA MER1_type 1 133 -127 184 42 0 0 chr20 2491916 2491940 -69661942 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 2154 59 0 24 chr20 2491940 2492227 -69661655 - AluY SINE Alu -1 303 1 569 181 66 163 chr20 2492227 2492391 -69661491 + MER112 DNA MER1_type 131 260 0 1789 143 7 7 chr20 2492556 2492849 -69661033 - AluSx SINE Alu -19 293 1 207 180 45 112 chr20 2493537 2493626 -69660256 - MIR SINE MIR -57 151 69 505 317 112 18 chr20 2493661 2493885 -69659997 - MIR SINE MIR -9 253 9 1990 261 133 25 chr20 2494456 2495367 -69658515 + L1ME LINE L1 6 1014 -5056 1764 240 71 62 chr20 2495485 2496346 -69657536 + L1PB1 LINE L1 5282 6150 -1 740 206 24 12 chr20 2496650 2496815 -69657067 - MIR SINE MIR -57 205 39 386 169 8 89 chr20 2496883 2497007 -69656875 + L1ME4a LINE L1 5786 5899 -222 25 0 0 0 chr20 2497212 2497237 -69656645 + AT_rich Low_complexity Low_complexity 1 25 0 235 265 29 44 chr20 2497948 2498016 -69655866 + L2 LINE L2 2988 3054 -218 211 383 25 0 chr20 2498856 2498937 -69654945 - MIR3 SINE MIR -42 166 84 550 190 141 68 chr20 2498963 2499126 -69654756 + MIR SINE MIR 82 256 -6 549 257 56 50 chr20 2499436 2499615 -69654267 - MIR3 SINE MIR -7 201 22 182 250 0 0 chr20 2499876 2499908 -69653974 + MIR SINE MIR 38 69 -139 2102 111 3 0 chr20 2501097 2501386 -69652496 + AluSq SINE Alu 1 290 -23 293 0 0 26 chr20 2501455 2501493 -69652389 + (TA)n Simple_repeat Simple_repeat 2 38 0 206 0 42 83 chr20 2502790 2502838 -69651044 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1674 130 67 0 chr20 2502848 2503118 -69650764 - AluSx SINE Alu -24 288 1 195 232 0 0 chr20 2503185 2503241 -69650641 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 549 246 67 58 chr20 2503322 2503546 -69650336 + L1MC5 LINE L1 7706 7931 -30 267 209 42 49 chr20 2503550 2503656 -69650226 + MIR SINE MIR 42 146 -73 207 294 44 0 chr20 2503732 2503800 -69650082 + MIR3 SINE MIR 112 182 -26 1357 192 66 0 chr20 2504685 2504844 -69649038 - AluJo SINE Alu -20 292 106 402 21 0 0 chr20 2504844 2504891 -69648991 + (TG)n Simple_repeat Simple_repeat 2 48 0 1357 192 66 0 chr20 2504891 2505002 -69648880 - AluJo SINE Alu -206 106 4 1553 168 0 59 chr20 2505074 2505229 -69648653 - AluJo SINE Alu -24 288 158 1561 172 35 14 chr20 2505229 2505519 -69648363 - AluJb SINE Alu -13 299 4 1553 168 0 59 chr20 2505519 2505667 -69648215 - AluJo SINE Alu -154 158 3 234 171 0 0 chr20 2505733 2505803 -69648079 + (TG)n Simple_repeat Simple_repeat 2 71 0 277 265 128 0 chr20 2505827 2505929 -69647953 + MIR3 SINE MIR 43 157 -51 427 323 71 9 chr20 2506130 2506356 -69647526 + MIR SINE MIR 14 253 -9 32 0 0 0 chr20 2506781 2506813 -69647069 + AT_rich Low_complexity Low_complexity 1 32 0 272 259 106 12 chr20 2506899 2506984 -69646898 + MIR3 SINE MIR 94 186 -22 2243 102 10 0 chr20 2506994 2507298 -69646584 - AluSx SINE Alu -5 307 1 601 252 48 48 chr20 2507418 2507648 -69646234 + L2 LINE L2 2896 3125 -188 419 333 71 7 chr20 2508028 2508169 -69645713 + L2 LINE L2 3122 3271 -1 259 292 37 14 chr20 2508723 2508856 -69645026 - MIR SINE MIR -62 200 64 368 314 39 13 chr20 2509357 2509513 -69644369 - MIR3 SINE MIR -27 181 22 242 383 33 0 chr20 2509999 2510119 -69643763 + L2 LINE L2 2904 3027 -245 2057 120 0 3 chr20 2510238 2510539 -69643343 + AluSq SINE Alu 2 301 -12 1789 158 0 3 chr20 2511173 2511476 -69642406 - AluJb SINE Alu -10 302 1 213 245 0 0 chr20 2511528 2511577 -69642305 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 186 143 0 0 chr20 2512234 2512269 -69641613 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2119 134 0 6 chr20 2512639 2512953 -69640929 + AluSx SINE Alu 1 312 0 416 346 86 7 chr20 2513494 2513709 -69640173 - MIR SINE MIR -14 248 18 395 223 21 11 chr20 2513891 2513985 -69639897 - MIR SINE MIR -121 141 47 2997 201 95 43 chr20 2513985 2514751 -69639131 + MER21B LTR ERV1 1 806 -57 219 209 99 55 chr20 2515437 2515528 -69638354 - MIR3 SINE MIR -25 183 89 239 277 53 11 chr20 2515735 2515829 -69638053 + MLT1J LTR MaLR 104 201 -310 2378 148 30 70 chr20 2515843 2516086 -69637796 - L1MB5 LINE L1 -6 6168 5917 2199 96 3 6 chr20 2516086 2516398 -69637484 - AluSx SINE Alu -1 311 1 2378 148 30 70 chr20 2516398 2516693 -69637189 - L1MB5 LINE L1 -257 5917 5652 663 231 60 82 chr20 2516739 2517021 -69636861 + MLT1J LTR MaLR 224 499 -12 2159 102 0 0 chr20 2517415 2517708 -69636174 + AluSx SINE Alu 1 293 -19 660 251 96 17 chr20 2517728 2517967 -69635915 + MER112 DNA MER1_type 2 259 -1 193 244 67 84 chr20 2517967 2518086 -69635796 - MIR3 SINE MIR -48 160 44 267 312 0 64 chr20 2518392 2518501 -69635381 + MIR SINE MIR 87 188 -74 564 301 46 20 chr20 2518624 2518820 -69635062 - MIR SINE MIR -16 246 46 329 295 80 18 chr20 2519014 2519126 -69634756 + MER5B DNA MER1_type 1 119 -59 602 136 0 30 chr20 2519126 2519258 -69634624 + (TTTC)n Simple_repeat Simple_repeat 1 128 0 1815 156 6 34 chr20 2519280 2519600 -69634282 - AluSx SINE Alu -1 311 1 280 183 0 50 chr20 2519600 2519660 -69634222 + MER5B DNA MER1_type 121 177 -1 227 180 0 40 chr20 2519766 2519816 -69634066 - MIR SINE MIR -62 146 99 576 276 43 0 chr20 2520211 2520374 -69633508 - MIR SINE MIR -92 170 1 182 295 95 32 chr20 2521541 2521636 -69632246 + L2 LINE L2 3153 3253 -19 269 318 159 8 chr20 2521974 2522100 -69631782 - MIR3 SINE MIR -17 191 47 260 278 146 28 chr20 2522164 2522308 -69631574 + MIR3 SINE MIR 23 183 -25 277 367 93 0 chr20 2524663 2524802 -69629080 + L2 LINE L2 3121 3272 0 644 216 207 19 chr20 2524851 2525059 -69628823 - MIR SINE MIR 0 262 16 263 307 193 9 chr20 2525564 2525678 -69628204 + MIR SINE MIR 96 230 -32 22 0 0 0 chr20 2525697 2525719 -69628163 + AT_rich Low_complexity Low_complexity 1 22 0 2056 106 20 3 chr20 2525723 2526016 -69627866 + AluSx SINE Alu 1 298 -14 456 337 87 0 chr20 2526143 2526315 -69627567 + MIR3 SINE MIR 2 143 -65 2165 104 0 3 chr20 2526844 2527141 -69626741 - AluSq SINE Alu -15 298 3 261 242 17 92 chr20 2527193 2527313 -69626569 + L2 LINE L2 3151 3261 -52 788 172 16 0 chr20 2527340 2527468 -69626414 + FLAM_C SINE Alu 2 131 -12 424 267 44 84 chr20 2527515 2527811 -69626071 - L3 LINE CR1 -193 1384 1101 2206 95 0 0 chr20 2527924 2528220 -69625662 - AluSx SINE Alu -16 296 1 475 232 30 77 chr20 2528462 2528630 -69625252 + MIR SINE MIR 47 206 -56 512 301 107 5 chr20 2528805 2529011 -69624871 - MIR SINE MIR -35 227 1 2173 112 0 0 chr20 2529869 2530174 -69623708 + AluSx SINE Alu 1 305 -7 370 290 28 0 chr20 2530208 2530315 -69623567 - MIR3 SINE MIR -14 194 85 322 286 0 51 chr20 2530310 2530408 -69623474 - MIR3 SINE MIR -3 205 113 * 1751 164 0 4 chr20 2530513 2530794 -69623088 - AluJb SINE Alu -28 284 5 1041 296 25 68 chr20 2532610 2533093 -69620789 - L2 LINE L2 -1 3312 2851 1681 120 0 0 chr20 2533195 2533436 -69620446 + AluSc SINE Alu 63 303 -6 1479 200 62 0 chr20 2533486 2533806 -69620076 - MER58B DNA MER1_type 0 341 2 1509 172 41 7 chr20 2533816 2534145 -69619737 - MER33 DNA MER1_type 0 324 1 243 295 0 0 chr20 2534251 2534329 -69619553 + (ATTTG)n Simple_repeat Simple_repeat 5 82 0 1253 108 0 0 chr20 2534581 2534757 -69619125 + AluSq SINE Alu 135 310 -3 222 62 0 0 chr20 2534771 2534803 -69619079 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 803 160 15 0 chr20 2535195 2535413 -69618469 - FLAM_C SINE Alu 0 220 1 725 313 84 10 chr20 2535546 2535856 -69618026 - MLT1I LTR MaLR -14 395 63 463 280 114 89 chr20 2535988 2536235 -69617647 - L1MC5 LINE L1 -105 7856 7600 1761 146 3 7 chr20 2536235 2536522 -69617360 - AluJb SINE Alu -26 286 1 463 280 114 89 chr20 2536522 2536545 -69617337 - L1MC5 LINE L1 -361 7600 7579 2820 250 120 37 chr20 2536784 2538203 -69615679 + L1MC4a LINE L1 4762 6062 -84 1012 201 106 0 chr20 2538203 2538402 -69615480 + MER58A DNA MER1_type 4 223 -1 2820 250 120 37 chr20 2538402 2538503 -69615379 + L1MC4a LINE L1 6062 5345 -801 2032 108 35 0 chr20 2538503 2538791 -69615091 - AluSp SINE Alu -15 298 1 2820 250 120 37 chr20 2538791 2538857 -69615025 + L1MC4a LINE L1 5344 5403 -743 234 330 11 11 chr20 2540023 2540111 -69613771 + L2 LINE L2 3173 3260 -12 403 217 198 76 chr20 2542602 2542921 -69610961 + LTR16A LTR ERVL 8 364 -93 186 254 0 0 chr20 2543822 2543889 -69609993 + CT-rich Low_complexity Low_complexity 2 68 0 1855 210 28 13 chr20 2544582 2544972 -69608910 - MSTD LTR MaLR 0 396 1 792 134 0 52 chr20 2545948 2546082 -69607800 + FLAM_C SINE Alu 2 128 -5 2123 108 0 0 chr20 2546447 2546716 -69607166 + AluSx SINE Alu 27 295 -17 783 185 7 22 chr20 2547503 2547638 -69606244 - FLAM_C SINE Alu 0 133 1 837 170 79 0 chr20 2548269 2548434 -69605448 + LTR41 LTR ERVL 1 178 -595 680 110 0 0 chr20 2548469 2548569 -69605313 - AluSp/q SINE Alu 0 313 214 225 269 103 26 chr20 2549256 2549334 -69604548 + LTR41 LTR ERVL 510 593 -180 1975 99 18 4 chr20 2549431 2549703 -69604179 - AluSq SINE Alu -36 277 2 898 206 104 28 chr20 2549946 2550284 -69603598 + MER58B DNA MER1_type 1 328 -13 3812 182 68 11 chr20 2550436 2550937 -69602945 + L1MB7 LINE L1 4625 5096 -1088 1814 130 53 33 chr20 2550937 2551236 -69602646 + AluJb SINE Alu 1 305 -7 3812 182 68 11 chr20 2551236 2551801 -69602081 + L1MB7 LINE L1 5096 5789 -395 1848 125 83 3 chr20 2551801 2552113 -69601769 - MER44D DNA MER2_type -2 607 1 3812 182 68 11 chr20 2552113 2552275 -69601607 + L1MB7 LINE L1 5789 5940 -244 538 195 120 25 chr20 2552317 2552517 -69601365 + L2 LINE L2 3008 3226 -87 190 286 143 71 chr20 2552625 2552765 -69601117 + MIR SINE MIR 35 184 -78 1178 264 131 64 chr20 2552766 2553457 -69600425 - L2 LINE L2 -373 2941 2197 2220 93 0 66 chr20 2553457 2553790 -69600092 + AluSx SINE Alu 1 311 -1 1178 264 131 64 chr20 2553790 2553832 -69600050 - L2 LINE L2 -1117 2197 2159 993 244 111 31 chr20 2553813 2554264 -69599618 - L2 LINE L2 -10 3303 2817 * 2294 100 0 3 chr20 2555574 2555875 -69598007 - AluSq SINE Alu -13 300 1 268 265 128 0 chr20 2555875 2555992 -69597890 - L2 LINE L2 -565 2749 2618 673 226 164 0 chr20 2556002 2556210 -69597672 + MIR SINE MIR 15 256 -6 2151 130 0 0 chr20 2556341 2556641 -69597241 - AluSx SINE Alu -12 300 1 842 111 0 15 chr20 2559735 2559870 -69594012 + FLAM_C SINE Alu 1 133 0 347 245 102 10 chr20 2560198 2560296 -69593586 - MIR SINE MIR -115 147 41 1298 91 0 17 chr20 2560389 2560564 -69593318 - AluSc SINE Alu -6 303 132 240 330 38 0 chr20 2560963 2561069 -69592813 - MIR SINE MIR -57 151 42 3329 208 111 50 chr20 2564159 2565859 -69588023 + L1MB5 LINE L1 3841 5647 -533 759 236 89 13 chr20 2565864 2566089 -69587793 + MER21B LTR ERV1 1 242 -621 545 211 0 0 chr20 2566127 2566222 -69587660 + LTR8A LTR ERV1 169 263 -464 351 176 118 0 chr20 2566227 2566295 -69587587 - LTR8 LTR ERV1 -613 78 3 1738 197 92 28 chr20 2566300 2566409 -69587473 + L1MB5 LINE L1 5677 5778 -396 1841 148 99 69 chr20 2566409 2566841 -69587041 - MER65A LTR ERV1 0 445 1 1738 197 92 28 chr20 2566841 2567199 -69586683 + L1MB5 LINE L1 5778 6174 0 2003 125 66 0 chr20 2567479 2567768 -69586114 - AluSx SINE Alu -4 308 1 2096 93 18 7 chr20 2568266 2568546 -69585336 + AluSx SINE Alu 11 293 -19 1124 117 0 19 chr20 2569142 2569304 -69584578 - FRAM SINE Alu -21 155 1 361 156 55 18 chr20 2569345 2569454 -69584428 + CT-rich Low_complexity Low_complexity 2 114 0 249 116 5 68 chr20 2569461 2569520 -69584362 - Alu SINE Alu 0 302 253 2008 46 4 4 chr20 2569968 2570208 -69583674 + AluSp SINE Alu 1 240 -73 189 0 0 0 chr20 2570221 2570242 -69583640 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2064 108 27 17 chr20 2570623 2570919 -69582963 + AluSx SINE Alu 1 299 -13 297 303 113 30 chr20 2570930 2571161 -69582721 - L1MC/D LINE L1 -2215 5593 5344 193 105 0 53 chr20 2571176 2571214 -69582668 + L2 LINE L2 3207 3242 -71 279 0 0 0 chr20 2571236 2571267 -69582615 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 227 209 0 0 chr20 2571271 2571314 -69582568 + MIR SINE MIR 105 147 -115 539 120 102 0 chr20 2571387 2571495 -69582387 - LTR52 LTR ERVL -67 354 236 2119 221 77 22 chr20 2571601 2572148 -69581734 + L1ME3A LINE L1 5594 6170 0 207 171 0 0 chr20 2572150 2572167 -69581715 + A-rich Low_complexity Low_complexity 1 17 -24 626 132 47 0 chr20 2572167 2572273 -69581609 + HY1 scRNA scRNA 1 111 -1 207 171 0 0 chr20 2572273 2572296 -69581586 + A-rich Low_complexity Low_complexity 16 41 0 891 272 59 49 chr20 2572417 2572843 -69581039 - L2 LINE L2 0 3313 2884 1657 230 120 56 chr20 2572846 2573466 -69580416 + LTR41 LTR ERVL 3 696 -99 2283 189 17 13 chr20 2573466 2573925 -69579957 + MER65C LTR ERV1 1 461 0 1657 230 120 56 chr20 2573925 2574032 -69579850 + LTR41 LTR ERVL 696 795 0 1029 285 88 25 chr20 2574038 2574550 -69579332 - L2 LINE L2 -436 2878 2335 1054 219 36 33 chr20 2574745 2574936 -69578946 + L1M4b LINE L1 1212 1401 -5458 212 0 36 0 chr20 2574936 2574964 -69578918 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 270 81 0 0 chr20 2574963 2575000 -69578882 + (CA)n Simple_repeat Simple_repeat 1 37 0 1054 219 36 33 chr20 2574964 2575114 -69578768 + L1M4b LINE L1 1401 1518 -5341 386 191 43 11 chr20 2575145 2575239 -69578643 + L1M4b LINE L1 3475 3571 -3386 873 150 0 0 chr20 2575281 2575408 -69578474 - FLAM_C SINE Alu -6 127 1 4781 154 25 48 chr20 2575415 2576360 -69577522 - L1MD1 LINE L1 0 6740 5817 1570 115 196 8 chr20 2576360 2576620 -69577262 - AluSg1 SINE Alu 0 309 1 4781 154 25 48 chr20 2576620 2576649 -69577233 - L1MD1 LINE L1 -923 5817 5789 399 129 212 0 chr20 2576649 2576734 -69577148 - MER21-int LTR ERV1 -231 3960 3858 1823 214 83 41 chr20 2576734 2577287 -69576595 - L1MD1 LINE L1 -2400 4244 3659 2005 152 0 13 chr20 2577287 2577603 -69576279 - AluSx SINE Alu 0 312 1 1823 214 83 41 chr20 2577603 2577690 -69576192 - L1MD1 LINE L1 -2985 3659 3577 2303 79 7 0 chr20 2577694 2577984 -69575898 - AluSp SINE Alu -21 292 1 1066 176 80 73 chr20 2578007 2578354 -69575528 - MER66A LTR ERV1 -139 340 97 5173 201 58 61 chr20 2578406 2579643 -69574239 - L1MD1 LINE L1 -5108 1434 201 1831 172 7 0 chr20 2579643 2579951 -69573931 + AluJb SINE Alu 1 310 -2 5173 201 58 61 chr20 2579951 2580148 -69573734 - L1MD1 LINE L1 -6341 201 5 874 107 0 137 chr20 2580192 2580419 -69573463 + AluSg/x SINE Alu 136 339 0 2263 142 78 0 chr20 2580419 2580793 -69573089 + MER101 LTR ERV1 72 474 0 586 273 42 24 chr20 2580817 2581150 -69572732 - L1M4 LINE L1 -846 5300 4962 247 179 0 0 chr20 2581150 2581189 -69572693 - LTR47B LTR ERVL 0 443 405 1301 203 0 8 chr20 2581190 2581426 -69572456 - LTR47B LTR ERVL 0 443 210 262 189 0 34 chr20 2581436 2581495 -69572387 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581497 2581556 -69572326 - LTR47B LTR ERVL -185 258 200 247 189 0 34 chr20 2581558 2581617 -69572265 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581619 2581678 -69572204 - LTR47B LTR ERVL -185 258 200 232 171 0 0 chr20 2581680 2581715 -69572167 - LTR47A LTR ERVL -194 258 224 247 189 0 34 chr20 2581741 2581800 -69572082 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581802 2581861 -69572021 - LTR47B LTR ERVL -185 258 200 247 189 0 34 chr20 2581863 2581922 -69571960 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581924 2581983 -69571899 - LTR47B LTR ERVL -185 258 200 258 271 0 0 chr20 2581985 2582044 -69571838 - LTR47A LTR ERVL -194 258 200 262 189 0 34 chr20 2582046 2582105 -69571777 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2582107 2582166 -69571716 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2582168 2582227 -69571655 - LTR47B LTR ERVL -185 258 200 1060 208 4 79 chr20 2582229 2582508 -69571374 - LTR47A LTR ERVL -194 258 1 2163 110 17 0 chr20 2582527 2582826 -69571056 - AluSx SINE Alu -8 304 1 1888 261 119 11 chr20 2582831 2583628 -69570254 - L1M4 LINE L1 -1194 4952 4070 2155 132 0 6 chr20 2583675 2583986 -69569896 + AluSx SINE Alu 1 309 -3 568 252 19 7 chr20 2584644 2584799 -69569083 + MIR SINE MIR 14 170 -92 1884 212 32 63 chr20 2584959 2585496 -69568386 + MLT2B1 LTR ERVL 1 520 0 1610 250 108 43 chr20 2586019 2586507 -69567375 + MLT1G1 LTR MaLR 3 533 -62 2367 98 3 0 chr20 2586507 2586813 -69567069 - AluSp SINE Alu -6 307 1 1610 250 108 43 chr20 2586813 2586881 -69567001 + MLT1G1 LTR MaLR 533 595 0 286 303 8 91 chr20 2587207 2587260 -69566622 + L2 LINE L2 2952 3008 -305 687 261 58 43 chr20 2587260 2587517 -69566365 + MIR SINE MIR 2 262 0 286 303 8 91 chr20 2587517 2587595 -69566287 + L2 LINE L2 3008 3072 -241 1956 141 0 11 chr20 2587604 2587739 -69566143 + AluSx SINE Alu 1 136 -178 225 0 0 0 chr20 2587739 2587764 -69566118 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1956 141 0 11 chr20 2587764 2587945 -69565937 + AluSx SINE Alu 136 314 0 1278 279 58 7 chr20 2588213 2588640 -69565242 + LTR16A LTR ERVL 2 450 0 1253 206 5 0 chr20 2589615 2589834 -69564048 + MER58A DNA MER1_type 5 224 0 5403 129 19 45 chr20 2590411 2590670 -69563212 - HSMAR2 DNA Mariner 0 1302 1038 2351 103 0 0 chr20 2590670 2590971 -69562911 + AluSx SINE Alu 1 301 -11 5403 129 19 45 chr20 2590971 2591285 -69562597 - HSMAR2 DNA Mariner -264 1038 759 2240 103 17 0 chr20 2591285 2591577 -69562305 - AluSx SINE Alu -15 297 1 5403 129 19 45 chr20 2591577 2591908 -69561974 - HSMAR2 DNA Mariner -543 759 421 463 258 30 0 chr20 2592437 2592569 -69561313 - MIR3 SINE MIR -39 169 34 2205 121 3 6 chr20 2592937 2593250 -69560632 + AluSx SINE Alu 1 312 0 180 318 257 6 chr20 2593263 2593442 -69560440 + L2 LINE L2 2831 3054 -218 198 331 63 14 chr20 2593472 2593614 -69560268 + L2 LINE L2 2951 3099 -173 385 229 7 13 chr20 2593779 2593932 -69559950 + (TGAA)n Simple_repeat Simple_repeat 1 152 0 580 159 12 29 chr20 2593948 2594118 -69559764 + (TGAA)n Simple_repeat Simple_repeat 2 168 0 243 286 57 9 chr20 2594941 2595046 -69558836 - MIR SINE MIR -79 183 74 202 103 0 0 chr20 2595204 2595233 -69558649 - L2 LINE L2 -18 3295 3267 2355 93 0 0 chr20 2595503 2595794 -69558088 - AluSc SINE Alu -16 293 3 197 130 0 22 chr20 2596134 2596160 -69557722 + (TAA)n Simple_repeat Simple_repeat 2 28 -18 2143 94 11 14 chr20 2596160 2596447 -69557435 + AluSx SINE Alu 1 286 -26 197 130 0 22 chr20 2596447 2596466 -69557416 + (TAA)n Simple_repeat Simple_repeat 28 46 0 318 271 74 0 chr20 2596467 2596589 -69557293 - MIR SINE MIR -1 261 131 22 70 0 0 chr20 2596591 2596634 -69557248 + AT_rich Low_complexity Low_complexity 1 43 0 193 365 0 0 chr20 2596643 2596728 -69557154 - MIR SINE MIR -2 260 176 527 125 0 0 chr20 2596742 2596822 -69557060 + MER5A DNA MER1_type 5 84 -105 1345 245 3 3 chr20 2597042 2597377 -69556505 + L1MC2 LINE L1 2638 2972 -3174 1046 161 0 0 chr20 2597377 2597538 -69556344 + AluJb SINE Alu 149 309 -3 9209 186 30 46 chr20 2597549 2599271 -69554611 + L1MC2 LINE L1 2954 4703 -1641 1370 161 48 20 chr20 2599271 2599563 -69554319 + L1MA4 LINE L1 5995 6294 -6 9209 186 30 46 chr20 2599563 2599768 -69554114 + L1MC2 LINE L1 4703 4910 -1434 14636 115 37 54 chr20 2599768 2599919 -69553963 + Tigger1 DNA MER2_type 1 153 -2265 1725 159 3 51 chr20 2599919 2600233 -69553649 - AluJo SINE Alu -13 299 1 14636 115 37 54 chr20 2600233 2602318 -69551564 + Tigger1 DNA MER2_type 153 2193 -225 1852 138 6 66 chr20 2602318 2602636 -69551246 - AluJb SINE Alu -13 299 1 14636 115 37 54 chr20 2602636 2602858 -69551024 + Tigger1 DNA MER2_type 2193 2417 -1 9209 186 30 46 chr20 2602858 2603146 -69550736 + L1MC2 LINE L1 4910 5201 -1143 2308 100 0 0 chr20 2603146 2603435 -69550447 - AluSx SINE Alu -23 289 1 9209 186 30 46 chr20 2603435 2604000 -69549882 + L1MC2 LINE L1 5201 5661 -683 2381 98 0 7 chr20 2604000 2604305 -69549577 + AluSc SINE Alu 1 303 -6 9209 186 30 46 chr20 2604305 2604976 -69548906 + L1MC2 LINE L1 5661 6342 -2 2406 69 0 7 chr20 2605018 2605322 -69548560 - AluY SINE Alu -9 302 1 370 253 230 37 chr20 2605445 2605793 -69548089 + L1ME4a LINE L1 5706 6120 -1 253 222 8 8 chr20 2606025 2606151 -69547731 + GA-rich Low_complexity Low_complexity 1 126 0 1784 81 0 9 chr20 2606269 2606490 -69547392 - AluSc SINE Alu -90 219 1 494 320 49 9 chr20 2606754 2606979 -69546903 + MIR SINE MIR 15 248 -14 1951 124 40 13 chr20 2606986 2607284 -69546598 + AluSg SINE Alu 1 306 -4 364 225 79 0 chr20 2607316 2607405 -69546477 - MER46C DNA MER2_type -23 315 220 223 192 0 0 chr20 2607520 2607566 -69546316 + MIR SINE MIR 105 149 -66 359 250 148 39 chr20 2608124 2608252 -69545630 + MER102a DNA MER1_type 10 151 -179 517 206 32 65 chr20 2608347 2608519 -69545363 - MIR SINE MIR -27 181 6 1451 187 74 0 chr20 2608539 2608796 -69545086 + MER66A LTR ERV1 1 276 -202 928 223 5 27 chr20 2608807 2609027 -69544855 - L1M4 LINE L1 -1191 4955 4741 248 173 0 19 chr20 2609031 2609083 -69544799 - Alu SINE Alu 0 302 252 * 1024 162 24 0 chr20 2609073 2609240 -69544642 + MER66A LTR ERV1 278 448 -30 337 293 83 32 chr20 2609233 2609390 -69544492 + MER102a DNA MER1_type 166 330 0 * 313 317 170 7 chr20 2609410 2609710 -69544172 + L2 LINE L2 2248 2596 -718 186 212 0 0 chr20 2609778 2609811 -69544071 + MIR SINE MIR 117 149 -113 222 175 0 0 chr20 2610164 2610204 -69543678 + L2 LINE L2 3024 3063 -250 4516 150 41 18 chr20 2610204 2611055 -69542827 - L1MB8 LINE L1 0 6178 5308 673 170 0 0 chr20 2611056 2611168 -69542714 - FLAM_C SINE Alu -4 139 28 4412 186 22 75 chr20 2611220 2611852 -69542030 - L1MB8 LINE L1 -837 5309 4764 1479 191 33 26 chr20 2611852 2612156 -69541726 - AluJb SINE Alu -6 306 1 4412 186 22 75 chr20 2612156 2612688 -69541194 - L1MB8 LINE L1 -1382 4764 4206 2796 126 20 11 chr20 2612774 2613233 -69540649 - L1MB3 LINE L1 -7 6176 5714 233 143 0 0 chr20 2613234 2613269 -69540613 - 5S rRNA rRNA -85 36 2 932 117 0 0 chr20 2613271 2613408 -69540474 - L1MB3 LINE L1 -455 5728 5592 * 957 222 25 21 chr20 2613403 2613642 -69540240 - L1MB3 LINE L1 -1037 5109 4870 * 3098 209 14 64 chr20 2613610 2614481 -69539401 - L1MB8 LINE L1 -1980 4166 3340 2837 217 68 42 chr20 2614511 2614575 -69539307 - MER21B LTR ERV1 -70 793 732 192 77 0 0 chr20 2614575 2614601 -69539281 + (CAATT)n Simple_repeat Simple_repeat 1 26 0 2837 217 68 42 chr20 2614601 2615291 -69538591 - MER21B LTR ERV1 -131 732 20 2356 225 47 19 chr20 2615313 2615546 -69538336 - L1MB8 LINE L1 -2804 3342 3117 2206 120 7 10 chr20 2615546 2615855 -69538027 - AluSx SINE Alu -4 308 1 2356 225 47 19 chr20 2615855 2616319 -69537563 - L1MB8 LINE L1 -3029 3117 2625 435 253 129 39 chr20 2616360 2616538 -69537344 + L2 LINE L2 3102 3295 -18 522 269 0 44 chr20 2616685 2616845 -69537037 - L2 LINE L2 0 3313 3161 180 316 0 0 chr20 2616933 2616990 -69536892 - L2 LINE L2 -309 2963 2907 188 255 121 64 chr20 2617181 2617322 -69536560 + L2 LINE L2 2949 3097 -175 476 263 60 0 chr20 2617521 2617654 -69536228 + MIR SINE MIR 2 142 -120 2037 137 17 0 chr20 2617655 2617948 -69535934 - AluSx SINE Alu -14 298 1 23 54 0 0 chr20 2617949 2617986 -69535896 + AT_rich Low_complexity Low_complexity 1 37 0 275 286 105 71 chr20 2618122 2618360 -69535522 + MIR SINE MIR 2 247 -15 2325 88 16 0 chr20 2618423 2618731 -69535151 - AluSq SINE Alu 0 313 1 1359 163 0 9 chr20 2618777 2618992 -69534890 - AluJb SINE Alu -15 297 85 432 252 17 17 chr20 2619803 2619918 -69533964 - MER5B DNA MER1_type 0 178 64 879 207 45 41 chr20 2619923 2620294 -69533588 + MLT1H LTR MaLR 1 496 -53 2358 110 0 0 chr20 2620344 2620644 -69533238 + AluSq SINE Alu 1 300 -13 337 274 42 0 chr20 2621223 2621318 -69532564 + MLT1I LTR MaLR 63 161 -248 2353 106 0 3 chr20 2621526 2621837 -69532045 - AluSg SINE Alu 0 310 1 2572 281 97 39 chr20 2621844 2622656 -69531226 - L2 LINE L2 -46 3267 2504 2397 79 3 0 chr20 2622656 2622948 -69530934 + AluSp SINE Alu 1 293 -20 2572 281 97 39 chr20 2622948 2623590 -69530292 - L2 LINE L2 -809 2504 1728 197 253 165 55 chr20 2623818 2623909 -69529973 - L2 LINE L2 -31 3241 3141 2194 108 3 0 chr20 2623932 2624228 -69529654 + AluSp SINE Alu 1 297 -16 729 239 17 60 chr20 2624500 2624734 -69529148 - MIR SINE MIR -11 251 28 1489 170 61 0 chr20 2624735 2624982 -69528900 - AluJb SINE Alu -50 262 1 2898 13 0 0 chr20 2625043 2625352 -69528530 + AluYa5 SINE Alu 3 311 0 618 201 27 85 chr20 2625806 2626030 -69527852 + L1MC5 LINE L1 7639 7849 -112 43988 44 5 2 chr20 2626683 2632816 -69521066 + L1PA4 LINE L1 3 6155 0 2493 63 3 3 chr20 2632839 2633142 -69520740 + AluSp SINE Alu 1 303 -10 187 370 0 0 chr20 2633320 2633393 -69520489 - MIR SINE MIR 0 262 190 382 191 61 69 chr20 2633570 2633701 -69520181 + L1MC5 LINE L1 7800 7929 -32 359 102 0 102 chr20 2635442 2635530 -69518352 + FRAM/FAM SINE Alu 1 78 -88 25 31 0 0 chr20 2635535 2635567 -69518315 + AT_rich Low_complexity Low_complexity 1 32 0 2217 225 86 22 chr20 2635652 2636318 -69517564 + MER67C LTR ERV1 3 710 0 3040 112 38 42 chr20 2636534 2636960 -69516922 - LOR1a LTR ERV1 0 497 72 1976 153 13 3 chr20 2636960 2637267 -69516615 - AluJb SINE Alu -2 310 1 3040 112 38 42 chr20 2637267 2637339 -69516543 - LOR1a LTR ERV1 -425 72 1 398 171 13 0 chr20 2637463 2637539 -69516343 + L1MC1 LINE L1 6257 6333 0 3377 224 62 4 chr20 2637645 2638586 -69515296 + L1MC4a LINE L1 4009 5064 -1082 1548 91 0 0 chr20 2638586 2638773 -69515109 + AluSg/x SINE Alu 111 297 -15 614 212 114 61 chr20 2639174 2639419 -69514463 + MLT1J LTR MaLR 162 419 -92 623 192 64 8 chr20 2639419 2639544 -69514338 - AluJb SINE Alu -179 133 2 405 224 41 0 chr20 2639547 2639645 -69514237 + MLT1J LTR MaLR 410 511 0 721 251 18 0 chr20 2639685 2639848 -69514034 + MER5B DNA MER1_type 1 166 -12 548 310 138 30 chr20 2639855 2640281 -69513601 + MLT1L LTR MaLR 144 615 0 244 226 117 109 chr20 2640338 2640350 -69513532 + L1MC4a LINE L1 5664 5674 -2134 1266 107 107 10 chr20 2640350 2640556 -69513326 - MER30 DNA MER1_type -1 229 4 244 226 117 109 chr20 2640556 2640639 -69513243 + L1MC4a LINE L1 5674 5755 -2053 1714 94 150 4 chr20 2640639 2640893 -69512989 + AluSx SINE Alu 1 291 -11 244 226 117 109 chr20 2640893 2641053 -69512829 + L1MC4a LINE L1 5755 5922 -1886 225 0 0 0 chr20 2641096 2641121 -69512761 + (TG)n Simple_repeat Simple_repeat 2 26 0 36 0 0 0 chr20 2641202 2641238 -69512644 + AT_rich Low_complexity Low_complexity 1 36 0 460 213 9 19 chr20 2642053 2642161 -69511721 + LTR16A1 LTR ERVL 19 125 -332 968 224 40 0 chr20 2642198 2642426 -69511456 + LTR16A1 LTR ERVL 221 457 0 434 198 41 83 chr20 2642619 2642703 -69511179 - Charlie4a DNA MER1_type -1453 508 429 2415 64 10 3 chr20 2642703 2643000 -69510882 + AluY SINE Alu 1 299 -12 434 198 41 83 chr20 2643000 2643036 -69510846 - Charlie4a DNA MER1_type -1532 429 393 1189 191 37 0 chr20 2643050 2643265 -69510617 + AluJo SINE Alu 82 304 -8 1392 208 41 19 chr20 2643271 2643589 -69510293 - Charlie4a DNA MER1_type -167 341 17 1778 81 0 0 chr20 2644213 2644434 -69509448 + AluSx SINE Alu 1 221 -91 428 322 76 12 chr20 2644873 2645044 -69508838 - MER5A DNA MER1_type -1 188 7 2056 40 84 71 chr20 2645121 2645417 -69508465 + AluY SINE Alu 1 300 -11 1322 140 15 0 chr20 2645429 2645629 -69508253 - AluJb SINE Alu -23 289 87 2006 118 9 43 chr20 2647321 2647505 -69506377 - AluSx SINE Alu 0 312 142 2286 99 0 13 chr20 2647505 2647808 -69506074 - AluSg SINE Alu -9 301 3 2006 118 9 43 chr20 2647808 2647946 -69505936 - AluSx SINE Alu -170 142 1 853 218 96 13 chr20 2648268 2648497 -69505385 - MLT1C LTR MaLR 0 467 220 498 163 23 0 chr20 2648557 2648643 -69505239 - MLT1C LTR MaLR -383 122 35 199 363 62 27 chr20 2648729 2648875 -69505007 + L2 LINE L2 3116 3266 -6 1840 100 0 4 chr20 2649028 2649268 -69504614 + AluSx SINE Alu 44 282 -30 285 29 0 0 chr20 2649271 2649305 -69504577 + (CA)n Simple_repeat Simple_repeat 1 34 0 2112 87 24 13 chr20 2656530 2656828 -69497054 + AluSg SINE Alu 1 301 -9 367 207 96 67 chr20 2657280 2657415 -69496467 - MER5B DNA MER1_type -35 143 5 208 139 0 0 chr20 2658459 2658495 -69495387 + (T)n Simple_repeat Simple_repeat 1 36 0 1877 90 94 4 chr20 2659314 2659580 -69494302 + AluSx SINE Alu 23 312 0 245 219 0 16 chr20 2659656 2659720 -69494162 + (TA)n Simple_repeat Simple_repeat 2 64 0 191 186 0 93 chr20 2660009 2660052 -69493830 + L3 LINE CR1 596 634 -943 267 304 163 11 chr20 2660329 2660513 -69493369 + MLT1H1 LTR MaLR 334 545 -10 354 260 106 0 chr20 2660521 2660625 -69493257 + MIR SINE MIR 39 153 -55 246 234 0 0 chr20 2660631 2660678 -69493204 - L2 LINE L2 0 3272 3226 203 189 0 0 chr20 2660690 2660727 -69493155 + L2 LINE L2 3264 3300 -13 1754 160 35 3 chr20 2660853 2661140 -69492742 - AluJo SINE Alu -16 296 1 1085 104 0 0 chr20 2661140 2661275 -69492607 - AluSq/x SINE Alu -177 135 1 358 59 59 0 chr20 2661275 2661326 -69492556 - L1MA2 LINE L1 -473 5831 5778 1749 100 80 12 chr20 2661327 2661478 -69492404 - AluSg SINE Alu -9 301 125 2387 66 0 7 chr20 2661478 2661835 -69492047 - AluY SINE Alu 0 311 1 1749 100 80 12 chr20 2661835 2661933 -69491949 - AluSg SINE Alu -185 125 35 1090 113 7 0 chr20 2661936 2662086 -69491796 - AluSq/x SINE Alu -161 151 1 594 80 0 10 chr20 2662086 2662186 -69491696 - L1MA2 LINE L1 -939 5366 5268 855 111 0 22 chr20 2662187 2662322 -69491560 + MER46A DNA MER2_type 105 236 0 2229 92 7 0 chr20 2663037 2663368 -69490514 + AluSx SINE Alu 1 333 0 282 295 62 16 chr20 2663755 2663884 -69489998 - MIR SINE MIR -1 261 127 1845 145 35 10 chr20 2664156 2664445 -69489437 - AluJb SINE Alu -16 296 1 526 293 98 5 chr20 2664445 2664643 -69489239 - L1MEc LINE L1 -4023 2373 2154 2174 124 7 0 chr20 2664679 2664977 -69488905 - AluSp SINE Alu -13 300 1 21 0 0 0 chr20 2664988 2665009 -69488873 + AT_rich Low_complexity Low_complexity 1 21 0 264 320 32 48 chr20 2665011 2665037 -69488845 - L1MEc LINE L1 -5574 631 606 2616 138 16 36 chr20 2665037 2665480 -69488402 + Tigger2a DNA MER2_type 1 434 0 264 320 32 48 chr20 2665480 2665578 -69488304 - L1MEc LINE L1 -5599 606 509 250 215 25 63 chr20 2665726 2665805 -69488077 + LTR16A1 LTR ERVL 3 78 -379 2541 96 0 0 chr20 2666068 2666380 -69487502 - AluSx SINE Alu 0 312 1 2848 181 29 22 chr20 2666431 2666984 -69486898 + MLT1F1 LTR MaLR 11 567 0 618 171 99 9 chr20 2668271 2668382 -69485500 - FLAM_C SINE Alu -21 122 2 1912 154 25 0 chr20 2668387 2668673 -69485209 - AluJo SINE Alu -19 293 1 188 368 84 0 chr20 2669575 2669670 -69484212 + MIR SINE MIR 86 188 -74 476 230 62 19 chr20 2669939 2670100 -69483782 + MLT1J2 LTR MaLR 269 436 -14 2067 108 3 46 chr20 2670187 2670493 -69483389 + AluSx SINE Alu 1 293 -19 263 61 0 0 chr20 2670711 2670744 -69483138 - U2 snRNA snRNA -155 33 1 7098 118 60 23 chr20 2670844 2671288 -69482594 - Tigger3b DNA MER2_type -1801 1227 801 2319 83 0 3 chr20 2671288 2671577 -69482305 + AluSg SINE Alu 1 288 -22 7098 118 60 23 chr20 2671577 2672114 -69481768 - Tigger3b DNA MER2_type -2227 801 192 2424 52 0 52 chr20 2672114 2672423 -69481459 - AluY SINE Alu -18 293 1 7098 118 60 23 chr20 2672423 2672621 -69481261 - Tigger3b DNA MER2_type -2836 192 3 342 263 224 17 chr20 2672640 2672819 -69481063 - MIR SINE MIR -13 249 34 2303 92 7 3 chr20 2673081 2673376 -69480506 - AluSx SINE Alu -16 296 1 1994 93 56 15 chr20 2673572 2673864 -69480018 + AluSc SINE Alu 1 303 0 357 24 0 0 chr20 2673981 2674023 -69479859 + (TG)n Simple_repeat Simple_repeat 2 43 0 230 343 29 64 chr20 2674878 2675050 -69478832 - MIR SINE MIR -11 251 86 225 275 0 66 chr20 2675739 2675830 -69478052 - MIR SINE MIR -112 150 66 6925 211 48 58 chr20 2676504 2677594 -69476288 + L1ME3A LINE L1 5 1104 -5540 2345 95 10 3 chr20 2677594 2677898 -69475984 + AluSg SINE Alu 1 306 -4 6925 211 48 58 chr20 2677898 2678245 -69475637 + L1ME3A LINE L1 1104 1453 -5191 1590 120 5 0 chr20 2678245 2678461 -69475421 + AluSg/x SINE Alu 82 298 -12 6925 211 48 58 chr20 2678461 2679638 -69474244 + L1ME3A LINE L1 1453 2804 -3840 1723 200 3 7 chr20 2679638 2679943 -69473939 - AluJo SINE Alu -8 304 1 6925 211 48 58 chr20 2679943 2680262 -69473620 + L1ME3A LINE L1 2804 3124 -3520 952 247 9 9 chr20 2680471 2680694 -69473188 - MER58A DNA MER1_type -1 223 1 721 303 17 6 chr20 2680733 2680908 -69472974 + MER91A DNA MER1_type 19 195 -1 2653 34 0 0 chr20 2681368 2681662 -69472220 - AluY SINE Alu -17 294 1 2298 124 27 24 chr20 2681663 2682035 -69471847 - THE1C LTR MaLR -2 373 1 562 307 99 16 chr20 2682041 2682299 -69471583 + L1ME3A LINE L1 4795 5079 -1565 2348 111 0 0 chr20 2682299 2682597 -69471285 - AluSx SINE Alu -14 298 1 562 307 99 16 chr20 2682597 2682643 -69471239 + L1ME3A LINE L1 5079 5120 -1524 483 292 92 41 chr20 2682695 2683086 -69470796 + L1ME LINE L1 863 1273 -5658 2421 139 37 49 chr20 2683259 2683691 -69470191 + LTR3 LTR ERVK 3 429 0 1319 236 275 13 chr20 2683850 2684312 -69469570 + MLT1G1 LTR MaLR 13 595 0 271 260 113 40 chr20 2684364 2684593 -69469289 + L1ME LINE L1 1264 1479 -4944 564 306 71 3 chr20 2684646 2684943 -69468939 + L1ME3A LINE L1 6056 6372 -296 324 297 65 36 chr20 2684979 2685117 -69468765 + HAL1 LINE L1 2292 2433 -74 283 268 14 0 chr20 2685384 2685455 -69468427 - L2 LINE L2 -5 3267 3196 563 195 371 0 chr20 2685789 2685999 -69467883 + LTR16C LTR ERVL 202 489 -2 2196 109 10 3 chr20 2686933 2687227 -69466655 - AluSx SINE Alu -16 296 1 634 186 83 0 chr20 2687297 2687453 -69466429 - MER3 DNA MER1_type -79 130 9 306 195 25 200 chr20 2687480 2687680 -69466202 + MIR SINE MIR 89 253 -9 2246 105 0 40 chr20 2687774 2688097 -69465785 - AluSx SINE Alu -2 310 1 1709 222 68 44 chr20 2688098 2688557 -69465325 + Cheshire DNA MER1_type 42 511 -1909 542 154 94 8 chr20 2688557 2688674 -69465208 - MLT1D LTR MaLR 0 505 379 349 252 8 76 chr20 2688676 2688795 -69465087 - MLT1-int LTR MaLR -247 1124 1014 1515 108 10 0 chr20 2688797 2689001 -69464881 - AluSq SINE Alu -12 301 96 434 192 69 23 chr20 2689046 2689097 -69464785 - MLT1D LTR MaLR -259 246 199 2430 88 0 3 chr20 2689097 2689402 -69464480 - AluSg SINE Alu -6 304 1 434 192 69 23 chr20 2689402 2689480 -69464402 - MLT1D LTR MaLR -306 199 111 843 209 5 56 chr20 2689481 2689696 -69464186 - MLT1D-int LTR MaLR -207 1164 961 850 273 5 0 chr20 2689838 2690047 -69463835 - MLT1D-int LTR MaLR -488 883 674 1079 174 4 85 chr20 2690106 2690365 -69463517 - MLT1D-int LTR MaLR -711 660 423 1147 181 0 0 chr20 2690375 2690552 -69463330 - AluJb SINE Alu -1 311 135 1187 253 57 38 chr20 2690980 2691403 -69462479 + LTR47B LTR ERVL 13 443 0 345 214 34 0 chr20 2691424 2691513 -69462369 + MER96 DNA MER1_type? 1 92 -83 283 272 0 72 chr20 2691606 2691731 -69462151 + MER103 DNA DNA 50 165 -1 728 213 64 50 chr20 2692076 2692131 -69461751 - MER3 DNA MER1_type 0 209 156 2803 99 60 26 chr20 2692131 2692472 -69461410 + L1MA4 LINE L1 5818 6181 -119 2112 147 0 0 chr20 2692472 2692772 -69461110 + AluSx SINE Alu 1 300 -12 2803 99 60 26 chr20 2692772 2692893 -69460989 + L1MA4 LINE L1 6181 6296 -4 728 213 64 50 chr20 2692893 2693039 -69460843 - MER3 DNA MER1_type -53 156 5 333 221 19 32 chr20 2693882 2694036 -69459846 + CT-rich Low_complexity Low_complexity 3 154 0 306 314 66 16 chr20 2694119 2694240 -69459642 - MIR3 SINE MIR -46 162 36 201 121 0 0 chr20 2694348 2694381 -69459501 + (GA)n Simple_repeat Simple_repeat 2 34 0 2202 108 7 0 chr20 2695152 2695438 -69458444 - AluSx SINE Alu -20 292 5 29 28 0 0 chr20 2695446 2695482 -69458400 + AT_rich Low_complexity Low_complexity 1 36 0 374 258 122 52 chr20 2695497 2695875 -69458007 - L1M4 LINE L1 -1038 5108 4701 1704 162 88 0 chr20 2695875 2696159 -69457723 - AluJo SINE Alu -3 309 1 374 258 122 52 chr20 2696159 2696229 -69457653 - L1M4 LINE L1 -1445 4701 4637 1029 140 0 0 chr20 2698518 2698696 -69455186 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 197 381 69 38 chr20 2698704 2698995 -69454887 - L2 LINE L2 -2 3270 2971 54 49 0 0 chr20 2699746 2699828 -69454054 + AT_rich Low_complexity Low_complexity 1 82 0 2246 94 10 19 chr20 2700334 2700641 -69453241 + AluSg SINE Alu 1 304 -6 254 269 148 34 chr20 2701310 2701459 -69452423 + MIR SINE MIR 26 191 -71 287 281 31 31 chr20 2701525 2701621 -69452261 - L2 LINE L2 -19 3294 3199 2188 124 0 0 chr20 2701855 2702192 -69451690 + AluSx SINE Alu 1 337 0 2382 88 13 3 chr20 2702334 2702640 -69451242 - AluSq SINE Alu -4 309 1 23 0 0 0 chr20 2702693 2702716 -69451166 + AT_rich Low_complexity Low_complexity 1 23 0 228 67 0 0 chr20 2703572 2703602 -69450280 + (A)n Simple_repeat Simple_repeat 1 30 0 363 260 32 76 chr20 2703701 2703923 -69449959 + HAL1b LINE L1 59 263 -1085 2295 106 0 0 chr20 2703923 2704232 -69449650 + AluSx SINE Alu 1 309 0 363 260 32 76 chr20 2704232 2704350 -69449532 + HAL1b LINE L1 263 385 -963 249 286 66 22 chr20 2704419 2704510 -69449372 - L1MEd LINE L1 -5448 671 577 1788 126 74 95 chr20 2704809 2705189 -69448693 + MLT1B LTR MaLR 3 374 -16 2766 197 134 41 chr20 2705265 2706001 -69447881 - MER21B LTR ERV1 -58 805 1 363 310 57 7 chr20 2706907 2707135 -69446747 - L1MEc LINE L1 -3860 2394 2152 737 248 142 77 chr20 2707212 2707655 -69446227 - MLT1H LTR MaLR -64 485 14 352 322 76 9 chr20 2707746 2707957 -69445925 + L1M4 LINE L1 4712 4936 -1210 212 307 60 53 chr20 2708582 2708637 -69445245 - MIR SINE MIR -13 249 196 2184 98 35 0 chr20 2708637 2708924 -69444958 - AluSp SINE Alu -16 297 1 212 307 60 53 chr20 2708924 2709018 -69444864 - MIR SINE MIR -66 196 99 731 186 69 72 chr20 2709018 2709092 -69444790 - L1M4 LINE L1 -1546 4600 4527 1165 208 23 0 chr20 2709092 2709308 -69444574 - MER58A DNA MER1_type -3 221 1 731 186 69 72 chr20 2709308 2709468 -69444414 - L1M4 LINE L1 -1619 4527 4365 2264 99 6 43 chr20 2709468 2709646 -69444236 - AluSx SINE Alu 0 312 150 2424 74 0 7 chr20 2709646 2709942 -69443940 - AluY SINE Alu -17 294 1 2264 99 6 43 chr20 2709942 2710087 -69443795 - AluSx SINE Alu -162 150 1 731 186 69 72 chr20 2710087 2710157 -69443725 - L1M4 LINE L1 -1781 4365 4296 272 121 40 20 chr20 2710741 2710939 -69442943 + AluJo SINE Alu 1 302 0 180 0 0 0 chr20 2711167 2711187 -69442695 + (T)n Simple_repeat Simple_repeat 1 20 0 849 158 0 8 chr20 2711211 2711344 -69442538 - AluSg/x SINE Alu -26 284 153 559 86 0 0 chr20 2711344 2711414 -69442468 + AluSq/x SINE Alu 59 128 -185 201 39 0 0 chr20 2711601 2711627 -69442255 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2008 109 33 7 chr20 2711775 2712088 -69441794 + AluSx SINE Alu 1 320 0 719 73 0 0 chr20 2712279 2712375 -69441507 - L1PB1 LINE L1 0 6151 6056 655 236 43 0 chr20 2712410 2712571 -69441311 + MER5B DNA MER1_type 5 172 -6 2031 135 0 32 chr20 2712685 2712997 -69440885 + AluSq SINE Alu 1 302 -11 348 24 0 0 chr20 2713724 2713765 -69440117 + (CA)n Simple_repeat Simple_repeat 2 42 0 2320 96 0 3 chr20 2713832 2714133 -69439749 - AluSx SINE Alu -12 300 1 231 152 0 0 chr20 2714137 2714183 -69439699 + MADE1 DNA Mariner 35 80 0 419 289 14 7 chr20 2715166 2715308 -69438574 + L2 LINE L2 2869 3011 -302 2177 139 0 0 chr20 2715955 2716257 -69437625 + AluSx SINE Alu 1 302 -10 280 322 100 31 chr20 2716457 2716848 -69437034 - L2 LINE L2 -337 2977 2560 1682 146 90 36 chr20 2717126 2717482 -69436400 + THE1C LTR MaLR 1 375 0 2236 116 7 0 chr20 2718317 2718611 -69435271 - AluSq SINE Alu -17 296 1 277 186 0 17 chr20 2718641 2718700 -69435182 - L1ME4a LINE L1 -4 6117 6060 1919 154 3 13 chr20 2718703 2719060 -69434822 - AluJb SINE Alu 0 354 1 281 296 52 28 chr20 2719072 2719389 -69434493 - L1ME4a LINE L1 -80 6041 5659 283 294 110 41 chr20 2719396 2719985 -69433897 - L1ME4a LINE L1 -1548 4598 3969 846 248 24 16 chr20 2720267 2720513 -69433369 - L1ME3A LINE L1 -219 5951 5704 314 302 8 31 chr20 2720399 2720514 -69433368 - L1PA8A LINE L1 -313 5818 5705 * 2431 69 0 0 chr20 2720514 2720804 -69433078 + AluY SINE Alu 1 290 -21 314 302 8 31 chr20 2720804 2720817 -69433065 - L1PA8A LINE L1 -426 5705 5693 531 139 0 0 chr20 2721079 2721158 -69432724 + AluJb SINE Alu 38 116 -196 486 0 0 0 chr20 2721158 2721212 -69432670 + (CA)n Simple_repeat Simple_repeat 1 54 0 377 267 52 33 chr20 2721406 2721731 -69432151 + L1MEd LINE L1 1011 1347 -5025 285 51 0 0 chr20 2721760 2721799 -69432083 + (CA)n Simple_repeat Simple_repeat 2 40 0 335 250 38 50 chr20 2721808 2721951 -69431931 + L1MEd LINE L1 1251 1510 -4862 2295 180 90 14 chr20 2721960 2722524 -69431358 - MLT1E2 LTR MaLR -4 622 1 1986 101 3 20 chr20 2722570 2722876 -69431006 + L1MA8 LINE L1 5988 6288 -3 827 231 61 4 chr20 2722913 2723190 -69430692 + L1M4 LINE L1 3579 3871 -2275 306 263 100 50 chr20 2723344 2723664 -69430218 + L1MEd LINE L1 2910 3245 -3137 2586 140 34 5 chr20 2723681 2724095 -69429787 + MSTB LTR MaLR 1 426 0 679 251 40 87 chr20 2724095 2724441 -69429441 + MLT1E-int LTR MaLR 1037 1366 -5 1166 239 50 119 chr20 2724446 2725083 -69428799 + MLT1E LTR MaLR 1 593 0 1866 209 33 72 chr20 2725140 2725688 -69428194 + L1ME1 LINE L1 5652 6334 0 2817 13 0 0 chr20 2726017 2726320 -69427562 - AluYa5 SINE Alu -8 303 1 504 262 36 42 chr20 2726455 2726499 -69427383 - MER5B DNA MER1_type -1 177 134 1574 240 110 41 chr20 2726499 2726723 -69427159 - MLT1E LTR MaLR 0 593 386 2264 112 3 0 chr20 2726723 2727019 -69426863 + AluSg SINE Alu 1 297 -13 1574 240 110 41 chr20 2727019 2727349 -69426533 - MLT1E LTR MaLR -207 386 1 504 262 36 42 chr20 2727349 2727472 -69426410 - MER5B DNA MER1_type -44 134 11 2001 145 0 0 chr20 2727707 2727989 -69425893 + AluSx SINE Alu 1 282 -30 29 0 0 0 chr20 2727995 2728024 -69425858 + AT_rich Low_complexity Low_complexity 1 29 0 852 226 0 0 chr20 2729736 2729891 -69423991 + FRAM SINE Alu 1 155 -21 322 113 81 0 chr20 2730163 2730225 -69423657 + MADE1 DNA Mariner 2 68 -12 255 24 122 0 chr20 2730269 2730310 -69423572 + MADE1 DNA Mariner 35 80 0 267 348 56 17 chr20 2730582 2730760 -69423122 - MIR SINE MIR -39 223 39 2185 110 0 7 chr20 2730763 2731106 -69422776 + AluSx SINE Alu 5 345 0 2195 109 3 0 chr20 2732159 2732444 -69421438 - AluSx SINE Alu -26 286 1 1647 122 76 11 chr20 2732580 2732843 -69421039 - AluJb SINE Alu -22 290 11 982 112 0 0 chr20 2733142 2733267 -69420615 + AluSq/x SINE Alu 1 125 -187 2313 104 3 0 chr20 2733275 2733582 -69420300 + AluSx SINE Alu 1 308 -4 507 206 71 0 chr20 2734838 2734964 -69418918 + L1MB1 LINE L1 6034 6168 0 305 346 66 50 chr20 2734971 2735289 -69418593 + L1MC/D LINE L1 5415 5737 -2071 344 294 85 103 chr20 2735367 2735459 -69418423 + L1M4 LINE L1 3211 3303 -2843 2130 104 49 0 chr20 2735459 2735746 -69418136 + AluSx SINE Alu 3 303 -9 344 294 85 103 chr20 2735746 2736276 -69417606 + L1M4 LINE L1 3303 3822 -2324 537 345 96 26 chr20 2736295 2736623 -69417259 + L1M4 LINE L1 3913 4217 -1929 2699 45 0 0 chr20 2736623 2736934 -69416948 + AluY SINE Alu 1 311 0 537 345 96 26 chr20 2736934 2737333 -69416549 + L1M4 LINE L1 4217 4691 -1455 646 166 0 146 chr20 2737360 2737565 -69416317 + FAM SINE Alu 1 42 -7 356 280 0 11 chr20 2738418 2738511 -69415371 + L2 LINE L2 3192 3283 -30 513 158 0 192 chr20 2738559 2738635 -69415247 + MLT1E3 LTR MaLR 51 75 -551 833 147 8 0 chr20 2738635 2738764 -69415118 - FLAM_C SINE Alu -3 130 1 513 158 0 192 chr20 2738764 2738864 -69415018 + MLT1E3 LTR MaLR 75 193 -433 6642 182 20 11 chr20 2738864 2738931 -69414951 - L1P4 LINE L1 -573 5593 5528 212 0 36 0 chr20 2738931 2738959 -69414923 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6642 182 20 11 chr20 2738959 2740052 -69413830 - L1P4 LINE L1 -638 5528 4411 189 0 0 0 chr20 2740052 2740073 -69413809 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 6642 182 20 11 chr20 2740073 2740570 -69413312 - L1P4 LINE L1 -1755 4411 3920 1115 209 26 9 chr20 2740638 2740868 -69413014 + MLT1E3 LTR MaLR 391 624 0 529 172 11 11 chr20 2740866 2740959 -69412923 - Tigger5 DNA MER2_type 0 2323 2231 * 297 197 42 14 chr20 2741002 2741073 -69412809 - Tigger5 DNA MER2_type 0 2323 2251 * 298 231 0 0 chr20 2741042 2741094 -69412788 - Tigger5 DNA MER2_type -2268 55 4 483 238 89 55 chr20 2741201 2741403 -69412479 - MER63A DNA MER1_type 0 210 2 5386 175 160 110 chr20 2742173 2742785 -69411097 - L1MDa LINE L1 -4715 1825 1245 820 163 7 14 chr20 2742785 2742926 -69410956 + FLAM_C SINE Alu 2 141 -2 5386 175 160 110 chr20 2742926 2743894 -69409988 - L1MDa LINE L1 -5295 1245 18 350 239 148 21 chr20 2744165 2744307 -69409575 - MIR SINE MIR 0 262 103 2097 139 7 0 chr20 2744423 2744724 -69409158 - AluSx SINE Alu -8 304 2 777 122 0 16 chr20 2744962 2745085 -69408797 + FLAM_C SINE Alu 23 143 0 718 237 137 19 chr20 2745086 2745297 -69408585 + MIR SINE MIR 23 258 -4 190 273 62 62 chr20 2745441 2745569 -69408313 - L2 LINE L2 -229 3043 2916 2499 67 0 0 chr20 2746033 2746332 -69407550 + AluY SINE Alu 1 299 -12 684 215 14 96 chr20 2746373 2746433 -69407449 - MER3 DNA MER1_type -8 201 138 1071 150 45 0 chr20 2746433 2746455 -69407427 - L1MA8 LINE L1 0 6291 6271 1634 178 3 3 chr20 2746455 2746748 -69407134 + AluJo SINE Alu 1 293 -19 1071 150 45 0 chr20 2746748 2746945 -69406937 - L1MA8 LINE L1 -20 6271 6062 684 215 14 96 chr20 2746945 2747103 -69406779 - MER3 DNA MER1_type -71 138 1 2121 104 0 0 chr20 2747509 2747806 -69406076 - AluSx SINE Alu -2 310 14 2149 213 31 9 chr20 2748862 2749412 -69404470 - Charlie5 DNA MER1_type 0 2624 2063 645 195 42 0 chr20 2749408 2749526 -69404356 - MER3 DNA MER1_type -55 154 32 * 2384 70 0 0 chr20 2749629 2749927 -69403955 - AluY SINE Alu -13 298 1 246 247 52 0 chr20 2751172 2751249 -69402633 - MIR3 SINE MIR -15 193 113 658 153 105 8 chr20 2752142 2752266 -69401616 + MER39 LTR ERV1 5 140 -567 1364 193 96 12 chr20 2752284 2752606 -69401276 + MER39 LTR ERV1 357 705 -2 275 176 78 0 chr20 2752664 2752715 -69401167 + L1MC2 LINE L1 351 405 -6021 1608 120 0 4 chr20 2752717 2752958 -69400924 + AluSg/x SINE Alu 66 305 -7 9248 201 90 43 chr20 2752962 2753728 -69400154 + L1MC2 LINE L1 937 1666 -4958 1315 177 135 0 chr20 2753728 2753994 -69399888 - AluJo SINE Alu 0 302 1 9248 201 90 43 chr20 2753994 2754104 -69399778 + L1MC2 LINE L1 1666 1769 -4855 2113 107 27 0 chr20 2754104 2754404 -69399478 + AluSg SINE Alu 1 308 -2 9248 201 90 43 chr20 2754404 2755102 -69398780 + L1MC2 LINE L1 1769 2433 -4191 2163 113 0 0 chr20 2755102 2755411 -69398471 + AluSx SINE Alu 1 309 -3 9248 201 90 43 chr20 2755411 2756176 -69397706 + L1MC2 LINE L1 2433 3161 -3463 289 116 0 0 chr20 2756176 2756219 -69397663 - Alu SINE Alu -11 291 249 9248 201 90 43 chr20 2756219 2756296 -69397586 + L1MC2 LINE L1 3161 3233 -3391 2231 85 3 10 chr20 2756296 2756602 -69397280 + AluSq SINE Alu 1 304 -9 9248 201 90 43 chr20 2756602 2757667 -69396215 + L1MC2 LINE L1 3233 4247 -2377 1807 154 17 0 chr20 2757667 2757965 -69395917 + AluSx SINE Alu 1 303 -9 9248 201 90 43 chr20 2757965 2758209 -69395673 + L1MC2 LINE L1 4247 4478 -2146 1479 182 27 24 chr20 2758209 2758506 -69395376 - AluJo SINE Alu -14 298 1 9248 201 90 43 chr20 2758506 2760106 -69393776 + L1MC2 LINE L1 4478 6556 -68 938 167 0 0 chr20 2760108 2760270 -69393612 - AluJb SINE Alu -4 308 147 2052 117 0 7 chr20 2760283 2760582 -69393300 - AluSx SINE Alu -15 297 1 353 129 71 0 chr20 2760586 2760656 -69393226 + L1MC2 LINE L1 6550 6624 0 1858 113 0 0 chr20 2760766 2761022 -69392860 - AluSx SINE Alu -56 256 1 1246 195 75 10 chr20 2761127 2761419 -69392463 + AluJo SINE Alu 1 311 -1 375 232 66 13 chr20 2761429 2761580 -69392302 + MER110A-int LTR ERV1 1308 1466 -3470 2260 96 3 0 chr20 2761814 2762126 -69391756 - AluSp SINE Alu 0 313 1 446 178 89 32 chr20 2762491 2762648 -69391234 + MER110A-int LTR ERV1 2208 2373 -2563 547 256 63 63 chr20 2762846 2763116 -69390766 + MER110A-int LTR ERV1 2797 3066 -1870 232 271 24 38 chr20 2763255 2763347 -69390535 + MER5A DNA MER1_type 1 102 -87 759 218 68 34 chr20 2763778 2763984 -69389898 + MER110A-int LTR ERV1 2754 2966 -1681 1715 218 95 18 chr20 2764075 2764516 -69389366 + MER110A-int LTR ERV1 3124 3598 -1049 322 242 67 25 chr20 2764516 2764636 -69389246 - L1M4 LINE L1 -2949 3197 3073 816 94 0 35 chr20 2764643 2764813 -69389069 + (TTC)n Simple_repeat Simple_repeat 2 165 0 1534 206 87 30 chr20 2764816 2765209 -69388673 + MER110A-int LTR ERV1 3611 4025 -622 207 114 0 0 chr20 2765229 2765264 -69388618 + (TATG)n Simple_repeat Simple_repeat 2 36 0 850 237 0 0 chr20 2765271 2765427 -69388455 - AluJo/FRAM SINE Alu -25 287 132 1421 160 113 7 chr20 2765430 2765705 -69388177 - AluJo SINE Alu -8 304 1 2530 207 25 30 chr20 2765735 2766267 -69387615 + MER110A-int LTR ERV1 4051 4581 -66 2163 87 3 45 chr20 2766267 2766579 -69387303 + AluSx SINE Alu 1 299 -13 2530 207 25 30 chr20 2766579 2766615 -69387267 + MER110A-int LTR ERV1 4581 4616 -31 980 223 168 59 chr20 2766744 2767166 -69386716 + MER110A LTR ERV1 1 468 0 2187 120 0 0 chr20 2767220 2767528 -69386354 - AluSx SINE Alu -4 308 1 1307 73 23 0 chr20 2767607 2767784 -69386098 + AluSg/x SINE Alu 117 297 -15 633 211 121 115 chr20 2767886 2768425 -69385457 + MER34 LTR ERV1 1 542 0 340 281 143 70 chr20 2768537 2768810 -69385072 + L1ME LINE L1 5335 5656 -465 2095 127 0 6 chr20 2768810 2769124 -69384758 - AluSx SINE Alu 0 312 1 340 281 143 70 chr20 2769124 2769306 -69384576 + L1ME LINE L1 5656 5823 -298 2020 122 14 0 chr20 2769809 2770104 -69383778 - AluSx SINE Alu -13 299 1 2202 101 3 3 chr20 2770194 2770502 -69383380 + AluSg SINE Alu 1 308 -2 209 312 64 16 chr20 2772864 2772989 -69380893 + L2 LINE L2 2956 3086 -186 324 297 102 0 chr20 2773598 2773726 -69380156 - MIR SINE MIR -74 188 48 812 170 0 0 chr20 2774359 2774494 -69379388 + FLAM_C SINE Alu 9 143 0 1219 213 100 68 chr20 2774759 2775185 -69378697 + Charlie4a DNA MER1_type 3 448 -1513 1982 124 24 0 chr20 2775185 2775483 -69378399 + AluSx SINE Alu 1 305 -7 1219 213 100 68 chr20 2775483 2775545 -69378337 + Charlie4a DNA MER1_type 448 507 -1 771 103 0 0 chr20 2776035 2776152 -69377730 - AluY SINE Alu -4 307 191 261 277 60 0 chr20 2776298 2776381 -69377501 - L2 LINE L2 -25 3288 3201 282 353 67 0 chr20 2776696 2776815 -69377067 - MIR SINE MIR -16 246 120 768 270 140 32 chr20 2776990 2777398 -69376484 + LTR16A1 LTR ERVL 2 453 -4 3710 209 32 2 chr20 2777742 2778573 -69375309 - MER45B DNA AcHobo 0 1040 142 327 66 16 33 chr20 2778577 2778638 -69375244 + (TTCTCC)n Simple_repeat Simple_repeat 3 62 0 1101 227 4 34 chr20 2778644 2778772 -69375110 - AluJb SINE Alu -51 261 131 2098 134 3 0 chr20 2778772 2779077 -69374805 - AluSx SINE Alu -6 306 1 2128 118 0 13 chr20 2779081 2779395 -69374487 - AluSx SINE Alu -2 310 1 1101 227 4 34 chr20 2779395 2779530 -69374352 - AluJb SINE Alu -184 128 1 424 212 0 117 chr20 2779532 2779562 -69374320 - MER45B DNA AcHobo -918 122 90 2161 86 20 0 chr20 2779562 2779854 -69374028 + AluSx SINE Alu 1 298 -14 424 212 0 117 chr20 2779854 2779960 -69373922 - MER45B DNA AcHobo -950 90 2 427 275 150 15 chr20 2780001 2780201 -69373681 - MIR SINE MIR -34 228 2 273 379 86 8 chr20 2780216 2780578 -69373304 + L2 LINE L2 2579 2968 -346 317 306 18 18 chr20 2782112 2782223 -69371659 + MIR SINE MIR 88 198 -64 369 295 0 9 chr20 2783055 2783167 -69370715 - HAL1 LINE L1 -1649 858 748 795 259 0 11 chr20 2783168 2783353 -69370529 - MER20 DNA MER1_type 0 219 37 654 309 74 8 chr20 2783405 2783661 -69370221 - HAL1 LINE L1 -1753 754 482 490 149 0 0 chr20 2783748 2783835 -69370047 - L1MB7 LINE L1 -7 6177 6091 3558 122 22 76 chr20 2783928 2784072 -69369810 + MER41B LTR ERV1 1 151 -484 2186 88 27 0 chr20 2784072 2784368 -69369514 + AluSx SINE Alu 9 312 0 3558 122 22 76 chr20 2784368 2784894 -69368988 + MER41B LTR ERV1 151 635 0 523 93 289 0 chr20 2785592 2785689 -69368193 + FLAM_C SINE Alu 4 128 -5 1518 148 38 4 chr20 2786171 2786434 -69367448 - AluJb SINE Alu -29 283 12 611 51 51 0 chr20 2786484 2786563 -69367319 - AluSg/x SINE Alu -11 298 216 459 92 15 0 chr20 2786563 2786628 -69367254 - MER41A LTR ERV1 0 554 489 1095 135 0 0 chr20 2786635 2786805 -69367077 + AluSg/x SINE Alu 134 303 -9 3802 121 28 2 chr20 2787029 2787592 -69366290 - MER41B LTR ERV1 -57 578 1 1408 147 0 9 chr20 2787592 2787816 -69366066 - AluJb SINE Alu -90 222 1 207 0 0 0 chr20 2789861 2789884 -69363998 + (TAAAA)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr20 2789982 2790003 -69363879 + AT_rich Low_complexity Low_complexity 1 21 0 828 148 0 16 chr20 2790003 2790131 -69363751 - FLAM_C SINE Alu -6 127 2 652 153 144 144 chr20 2790821 2791043 -69362839 - MLT2D LTR ERVL 0 414 193 231 345 0 0 chr20 2791084 2791197 -69362685 + (TTAGGG)n Simple_repeat Simple_repeat 6 118 0 1843 126 74 44 chr20 2791342 2791706 -69362176 - THE1C LTR MaLR 0 375 1 1948 146 0 9 chr20 2792166 2792481 -69361401 + AluSx SINE Alu 1 312 0 22 0 0 0 chr20 2792609 2792631 -69361251 + AT_rich Low_complexity Low_complexity 1 22 0 1797 144 0 38 chr20 2792676 2792989 -69360893 + AluJo SINE Alu 1 301 -11 246 167 50 33 chr20 2792993 2793053 -69360829 + MLT2D LTR ERVL 217 277 -137 189 171 0 0 chr20 2793053 2793088 -69360794 + (TA)n Simple_repeat Simple_repeat 2 36 0 342 250 17 108 chr20 2793095 2793215 -69360667 - L1MC4 LINE L1 -1339 6703 6595 323 322 20 0 chr20 2793579 2793728 -69360154 + (CCCTAA)n Simple_repeat Simple_repeat 3 154 0 271 305 23 15 chr20 2794005 2794136 -69359746 + (CCCTAA)n Simple_repeat Simple_repeat 1 132 0 598 184 68 0 chr20 2794152 2794255 -69359627 - FLAM_A SINE Alu -21 121 12 319 351 6 6 chr20 2794354 2794528 -69359354 + (CCCTAA)n Simple_repeat Simple_repeat 1 174 0 1765 145 0 63 chr20 2795389 2795783 -69358099 - AluSx SINE Alu 0 373 1 23 33 0 0 chr20 2795826 2795856 -69358026 + AT_rich Low_complexity Low_complexity 1 30 0 428 130 74 37 chr20 2796241 2796258 -69357624 - L1MB5 LINE L1 -16 6158 6047 437 121 55 0 chr20 2796258 2796349 -69357533 - L1MB4 LINE L1 -39 6141 6046 4012 182 24 35 chr20 2796438 2797373 -69356509 - L1MB5 LINE L1 -109 6065 5138 1821 134 13 59 chr20 2797373 2797679 -69356203 - AluJo SINE Alu -20 292 1 4012 182 24 35 chr20 2797679 2797730 -69356152 - L1MB5 LINE L1 -1036 5138 5088 4903 38 0 0 chr20 2797751 2798622 -69355260 - L1P2 LINE L1 -507 5647 4777 * 7543 28 5 0 chr20 2798620 2799560 -69354322 + L1P2 LINE L1 3840 4784 -1362 584 238 50 19 chr20 2799570 2799730 -69354152 + MER63A DNA MER1_type 46 210 0 1380 62 0 0 chr20 2799827 2800006 -69353876 + (TTC)n Simple_repeat Simple_repeat 2 180 0 525 169 0 23 chr20 2800006 2800136 -69353746 + CT-rich Low_complexity Low_complexity 3 129 0 1695 163 3 68 chr20 2800139 2800334 -69353548 - AluJb SINE Alu -7 305 138 2125 118 14 7 chr20 2800334 2800630 -69353252 + AluSq SINE Alu 1 298 -15 1695 163 3 68 chr20 2800630 2800760 -69353122 - AluJb SINE Alu -174 138 1 21 0 0 0 chr20 2800842 2800863 -69353019 + AT_rich Low_complexity Low_complexity 1 21 0 1142 267 29 22 chr20 2800866 2801252 -69352630 - L1ME3 LINE L1 -1 6161 5773 2384 83 3 0 chr20 2801256 2801558 -69352324 - AluY SINE Alu -8 303 1 824 200 85 0 chr20 2801741 2801906 -69351976 + AluJb SINE Alu 9 187 -125 213 352 7 55 chr20 2801942 2802024 -69351858 + L2 LINE L2 291 365 -2949 1299 195 48 72 chr20 2802024 2802115 -69351767 + MLT1B LTR MaLR 1 93 -297 2514 75 10 0 chr20 2802115 2802423 -69351459 + AluY SINE Alu 1 311 0 1299 195 48 72 chr20 2802423 2802731 -69351151 + MLT1B LTR MaLR 93 390 0 213 352 7 55 chr20 2802731 2802793 -69351089 + L2 LINE L2 365 428 -2886 1760 219 30 10 chr20 2802821 2803227 -69350655 - LTR40c LTR ERVL -13 452 39 9353 241 65 57 chr20 2803275 2805268 -69348614 - HERVL40 LTR ERVL -16 5514 3538 2042 126 61 0 chr20 2805268 2805562 -69348320 - AluSq SINE Alu -1 312 1 9353 241 65 57 chr20 2805562 2805967 -69347915 - HERVL40 LTR ERVL -1992 3538 3138 2440 93 0 10 chr20 2805967 2806278 -69347604 - AluSx SINE Alu -4 308 1 9353 241 65 57 chr20 2806278 2806687 -69347195 - HERVL40 LTR ERVL -2392 3138 2684 1895 114 7 61 chr20 2806693 2807048 -69346834 + AluSx SINE Alu 1 339 0 1535 152 45 38 chr20 2807060 2807350 -69346532 + AluJo SINE Alu 1 292 -20 925 210 58 15 chr20 2807388 2807593 -69346289 + AluJo SINE Alu 54 267 -45 2250 113 7 0 chr20 2807615 2807907 -69345975 - AluSx SINE Alu -18 294 1 2296 104 0 0 chr20 2808039 2808337 -69345545 - AluSg SINE Alu -12 298 1 624 261 68 31 chr20 2808392 2808614 -69345268 - HERVL40 LTR ERVL -3924 1606 1377 411 245 20 10 chr20 2808873 2808975 -69344907 - HERVL40 LTR ERVL -4149 1381 1279 2005 149 26 0 chr20 2808996 2809298 -69344584 + AluJb SINE Alu 1 310 -2 497 263 77 13 chr20 2809398 2809554 -69344328 - HERVL40 LTR ERVL -4448 1082 917 399 220 70 10 chr20 2809728 2809828 -69344054 - HERVL40 LTR ERVL -5424 106 1 1217 198 93 28 chr20 2809849 2810173 -69343709 - LTR40c LTR ERVL -13 452 108 842 120 0 0 chr20 2810201 2810309 -69343573 + AluSq/x SINE Alu 1 108 -204 3977 36 14 2 chr20 2810312 2810815 -69343067 + L1PA5 LINE L1 5646 6154 0 2108 112 49 3 chr20 2811117 2811404 -69342478 - AluSx SINE Alu -12 300 1 497 143 74 175 chr20 2811707 2811896 -69341986 - MER69A DNA AcHobo -7 170 1 572 139 35 26 chr20 2812071 2812186 -69341696 - AluSg/x SINE Alu -12 298 183 240 219 319 8 chr20 2812415 2812534 -69341348 - MIR SINE MIR -60 202 47 2320 91 0 3 chr20 2812558 2812856 -69341026 + AluSx SINE Alu 4 300 -12 364 208 0 0 chr20 2813080 2813152 -69340730 - AluJb SINE Alu -114 188 117 915 121 0 8 chr20 2813171 2813303 -69340579 - AluSq/x SINE Alu -182 131 1 206 244 0 0 chr20 2813344 2813385 -69340497 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 1905 137 13 19 chr20 2814787 2815101 -69338781 + AluJo SINE Alu 1 312 0 244 85 43 0 chr20 2816549 2816596 -69337286 - LTR66 LTR ERVL -171 439 391 537 191 9 0 chr20 2817229 2817334 -69336548 - MER5A DNA MER1_type -80 109 4 248 239 11 67 chr20 2818476 2818656 -69335226 + C-rich Low_complexity Low_complexity 2 171 0 252 0 0 0 chr20 2818662 2818690 -69335192 + (CGG)n Simple_repeat Simple_repeat 3 30 0 206 233 44 25 chr20 2818722 2818881 -69335001 + (CGG)n Simple_repeat Simple_repeat 3 164 0 222 118 0 0 chr20 2818939 2818973 -69334909 + (CCG)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr20 2819031 2819052 -69334830 + (CGGG)n Simple_repeat Simple_repeat 4 24 0 25 0 0 0 chr20 2819075 2819100 -69334782 + GC_rich Low_complexity Low_complexity 1 25 0 280 216 45 23 chr20 2820822 2820910 -69332972 - L1ME4a LINE L1 -67 6054 5965 2117 141 0 0 chr20 2822047 2822369 -69331513 + AluSx SINE Alu 1 322 0 2792 33 0 0 chr20 2823121 2823427 -69330455 + AluY SINE Alu 1 306 -5 1587 214 78 13 chr20 2825813 2826200 -69327682 + LTR16C LTR ERVL 80 491 0 2101 128 21 0 chr20 2828009 2828299 -69325583 + AluJo SINE Alu 1 296 -16 1737 161 70 3 chr20 2828851 2829137 -69324745 + AluJb SINE Alu 1 305 -7 1163 142 0 0 chr20 2829146 2829301 -69324581 + FRAM SINE Alu 1 154 -22 876 190 9 3 chr20 2829309 2829531 -69324351 + AluJb SINE Alu 1 293 -19 2556 196 22 12 chr20 2829591 2830096 -69323786 - MLT1F LTR MaLR -32 510 1 477 0 0 0 chr20 2831643 2831696 -69322186 + (CA)n Simple_repeat Simple_repeat 1 53 0 543 259 86 81 chr20 2832333 2832730 -69321152 - LTR16A1 LTR ERVL -3 488 1 992 146 0 19 chr20 2834448 2834606 -69319276 + FRAM SINE Alu 18 172 -4 380 281 89 0 chr20 2834614 2834760 -69319122 + L1ME3A LINE L1 5945 6103 -67 2206 130 0 3 chr20 2834761 2835060 -69318822 + AluSx SINE Alu 1 298 -14 209 170 0 43 chr20 2835382 2835429 -69318453 + CT-rich Low_complexity Low_complexity 2 46 0 244 220 0 17 chr20 2835733 2835792 -69318090 + GA-rich Low_complexity Low_complexity 3 60 0 1798 178 0 4 chr20 2836032 2836307 -69317575 - AluJb SINE Alu -38 274 1 1173 258 79 65 chr20 2836477 2836717 -69317165 - L1MC4a LINE L1 -1633 6175 5940 1943 150 0 21 chr20 2836717 2837038 -69316844 + AluJb SINE Alu 1 315 0 1173 258 79 65 chr20 2837038 2837475 -69316407 - L1MC4a LINE L1 -1868 5940 5485 5803 253 131 25 chr20 2837477 2839960 -69313922 - L2 LINE L2 -1 3312 566 455 240 73 27 chr20 2839980 2840130 -69313752 - L1MC4a LINE L1 -2337 5471 5315 384 152 0 0 chr20 2840134 2840200 -69313682 + CT-rich Low_complexity Low_complexity 2 67 0 2063 141 10 0 chr20 2840200 2840505 -69313377 - AluJo SINE Alu 0 312 5 22 56 0 0 chr20 2840846 2840882 -69313000 + AT_rich Low_complexity Low_complexity 1 36 0 1030 276 158 14 chr20 2841089 2841600 -69312282 - L1ME2 LINE L1 -209 6024 5440 2222 106 0 0 chr20 2841600 2841906 -69311976 - AluSx SINE Alu 0 306 1 976 191 12 6 chr20 2841925 2842098 -69311784 + AluJb SINE Alu 129 302 -10 2495 70 0 7 chr20 2842103 2842404 -69311478 + AluSp SINE Alu 2 300 -13 4010 270 67 59 chr20 2842420 2843668 -69310214 - L1ME2 LINE L1 -1074 5141 3904 2499 87 0 0 chr20 2843668 2843966 -69309916 - AluSg SINE Alu -12 298 1 4010 270 67 59 chr20 2843966 2844943 -69308939 - L1ME2 LINE L1 -2311 3904 2889 1978 169 0 0 chr20 2844943 2845117 -69308765 - AluJb SINE Alu -5 307 131 2284 112 6 10 chr20 2845117 2845430 -69308452 - AluSx SINE Alu 0 312 1 1978 169 0 0 chr20 2845430 2845562 -69308320 - AluJb SINE Alu -180 132 1 4010 270 67 59 chr20 2845562 2845983 -69307899 - L1ME2 LINE L1 -3326 2889 2473 1802 83 9 4 chr20 2846024 2846253 -69307629 - AluSq SINE Alu -83 230 1 2752 257 132 17 chr20 2846259 2847318 -69306564 - L1ME2 LINE L1 -4205 2191 939 2388 95 0 0 chr20 2847318 2847612 -69306270 - AluSx SINE Alu -18 294 1 2752 257 132 17 chr20 2847612 2847914 -69305968 - L1ME2 LINE L1 -5457 939 673 716 178 0 15 chr20 2847915 2848050 -69305832 - FLAM_A SINE Alu -2 140 8 2139 269 52 16 chr20 2848055 2848629 -69305253 - L1ME2 LINE L1 -5709 687 87 189 0 0 0 chr20 2848629 2848650 -69305232 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2139 269 52 16 chr20 2848650 2848703 -69305179 - L1ME2 LINE L1 -6309 87 37 254 233 14 0 chr20 2848697 2848770 -69305112 - L1MEd LINE L1 -3267 2862 2789 * 430 285 88 45 chr20 2848778 2849196 -69304686 - L1MEd LINE L1 -3475 2654 2209 2723 35 3 0 chr20 2849196 2849506 -69304376 - AluY SINE Alu 0 311 1 430 285 88 45 chr20 2849506 2849600 -69304282 - L1MEd LINE L1 -3920 2209 2120 227 194 42 0 chr20 2849602 2849674 -69304208 - L1MA9 LINE L1 0 6312 6238 373 288 42 102 chr20 2849680 2849916 -69303966 - L1MEd LINE L1 -4170 2140 1919 781 240 43 34 chr20 2849924 2850132 -69303750 - MER63A DNA MER1_type 0 210 1 24 32 0 0 chr20 2850191 2850222 -69303660 + AT_rich Low_complexity Low_complexity 1 31 0 1100 277 64 48 chr20 2850278 2850481 -69303401 - L1MEd LINE L1 -4652 1658 1460 1917 172 3 0 chr20 2850481 2850778 -69303104 + AluJo SINE Alu 2 299 -13 1100 277 64 48 chr20 2850778 2851608 -69302274 - L1MEd LINE L1 -4850 1460 557 343 358 33 33 chr20 2851877 2852092 -69301790 - L1M4 LINE L1 -1146 5000 4786 387 136 0 0 chr20 2852112 2852171 -69301711 + AluJ/FLAM SINE Alu 1 59 -243 1371 217 4 14 chr20 2852176 2852453 -69301429 + AluJo SINE Alu 24 297 -15 4131 146 50 80 chr20 2852627 2853195 -69300687 - L1MB2 LINE L1 0 6171 5645 1084 187 20 49 chr20 2853195 2853441 -69300441 + MER8 DNA MER2_type 1 239 0 4131 146 50 80 chr20 2853441 2853899 -69299983 - L1MB2 LINE L1 -526 5645 5175 1288 200 118 52 chr20 2854601 2855066 -69298816 + Charlie4a DNA MER1_type 13 508 0 424 232 216 48 chr20 2855666 2855916 -69297966 - LTR16A1 LTR ERVL -16 441 150 1244 234 106 14 chr20 2855982 2856405 -69297477 - MLT1C LTR MaLR 0 467 6 2337 110 0 0 chr20 2856753 2857054 -69296828 - AluSc SINE Alu -8 301 1 321 228 179 14 chr20 2857076 2857221 -69296661 - MLT1J2 LTR MaLR 0 450 282 385 254 29 29 chr20 2857361 2857499 -69296383 - MLT1J LTR MaLR -369 142 5 1530 195 48 65 chr20 2857840 2857959 -69295923 - L1M4 LINE L1 -3565 3079 2959 1745 167 0 63 chr20 2857959 2858277 -69295605 - AluJb SINE Alu -12 300 3 1530 195 48 65 chr20 2858277 2858690 -69295192 - L1M4 LINE L1 -3685 2959 2596 261 182 18 18 chr20 2858688 2858743 -69295139 - L1MC1 LINE L1 -49 6284 6230 * 6419 211 29 53 chr20 2858733 2859575 -69294307 - L1M4 LINE L1 -4478 2168 1308 1266 108 80 0 chr20 2859575 2859788 -69294094 + MER30 DNA MER1_type 1 230 0 6419 211 29 53 chr20 2859788 2859984 -69293898 - L1M4 LINE L1 -5338 1308 1109 1973 152 3 3 chr20 2859984 2860274 -69293608 + AluJb SINE Alu 2 291 -21 6419 211 29 53 chr20 2860274 2861433 -69292449 - L1M4 LINE L1 -5537 1109 16 180 254 16 32 chr20 2861489 2861552 -69292330 - L3 LINE CR1 -780 797 736 261 318 47 0 chr20 2861561 2861668 -69292214 - L2 LINE L2 -27 3245 3134 731 202 101 5 chr20 2861793 2861981 -69291901 + MER3 DNA MER1_type 4 209 0 2677 45 0 6 chr20 2862825 2863136 -69290746 + AluY SINE Alu 1 309 -2 275 279 42 85 chr20 2863297 2863462 -69290420 + MIR SINE MIR 77 234 -28 2176 103 24 3 chr20 2863546 2863838 -69290044 + AluSx SINE Alu 1 298 -14 207 255 20 0 chr20 2865416 2865467 -69288415 + L2 LINE L2 3262 3313 0 754 160 0 89 chr20 2865824 2865888 -69287994 - MER3 DNA MER1_type 0 209 141 2359 92 0 0 chr20 2865888 2866180 -69287702 + AluSx SINE Alu 1 292 -20 754 160 0 89 chr20 2866180 2866284 -69287598 - MER3 DNA MER1_type -68 141 56 973 170 251 12 chr20 2866498 2866821 -69287061 - LTR16A1 LTR ERVL -2 455 56 1956 150 3 7 chr20 2866886 2867179 -69286703 + AluJb SINE Alu 1 292 -20 214 294 78 20 chr20 2868030 2868132 -69285750 + MIR SINE MIR 45 152 -56 195 250 0 0 chr20 2869006 2869050 -69284832 + L2 LINE L2 3044 3087 -185 606 212 16 171 chr20 2869288 2869609 -69284273 - LTR37B LTR ERV1 0 468 198 286 227 147 0 chr20 2869669 2869744 -69284138 - L1MA4A LINE L1 -28 6275 6190 657 167 39 78 chr20 2869749 2869925 -69283957 - L1MA4A LINE L1 -181 6122 5954 1549 74 0 0 chr20 2869925 2870114 -69283768 - AluSq SINE Alu 0 313 125 657 167 39 78 chr20 2870114 2870141 -69283741 - L1MA4A LINE L1 -349 5954 5927 242 133 173 40 chr20 2870171 2870246 -69283636 - LTR37B LTR ERV1 -270 198 114 2082 164 0 0 chr20 2870337 2870649 -69283233 - AluSx SINE Alu 0 312 1 1391 158 75 7 chr20 2870650 2870929 -69282953 - MER33 DNA MER1_type -26 298 1 625 207 124 0 chr20 2870937 2871082 -69282800 - MER5A DNA MER1_type 0 189 27 1785 111 51 63 chr20 2872868 2873184 -69280698 + AluSx SINE Alu 1 312 0 24 32 0 0 chr20 2875383 2875414 -69278468 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 2876880 2876907 -69276975 + (GGAGAA)n Simple_repeat Simple_repeat 6 32 0 188 194 129 32 chr20 2877298 2877360 -69276522 + L2 LINE L2 3245 3312 -1 180 0 0 0 chr20 2877655 2877675 -69276207 + (CGGGG)n Simple_repeat Simple_repeat 5 24 0 27 81 0 0 chr20 2877867 2877929 -69275953 + GC_rich Low_complexity Low_complexity 1 62 0 24 103 0 0 chr20 2878103 2878190 -69275692 + GC_rich Low_complexity Low_complexity 1 87 0 185 314 0 0 chr20 2879315 2879366 -69274516 - L2 LINE L2 -8 3264 3214 186 195 13 143 chr20 2882104 2882181 -69271701 - MIR3 SINE MIR -28 180 114 184 266 0 78 chr20 2882461 2882525 -69271357 + L2 LINE L2 3255 3313 0 279 256 156 0 chr20 2882697 2882787 -69271095 + MER103 DNA DNA 61 164 -2 983 204 107 89 chr20 2883498 2883522 -69270360 - LTR37B LTR ERV1 -15 453 431 1863 151 0 31 chr20 2883522 2883838 -69270044 + AluJb SINE Alu 1 307 0 983 204 107 89 chr20 2883838 2884251 -69269631 - LTR37B LTR ERV1 -37 431 6 1506 212 35 32 chr20 2887196 2887569 -69266313 + MLT1A2 LTR MaLR 1 374 0 1494 263 26 35 chr20 2888335 2888799 -69265083 - LTR16C LTR ERVL 0 491 32 628 112 10 10 chr20 2889425 2889523 -69264359 + FLAM_A SINE Alu 31 128 -14 526 240 16 0 chr20 2889523 2889648 -69264234 + L1M4 LINE L1 4912 5038 -1108 270 0 0 0 chr20 2890158 2890188 -69263694 + (TG)n Simple_repeat Simple_repeat 2 31 0 1575 122 110 28 chr20 2890188 2890442 -69263440 - AluJo SINE Alu -34 278 4 2111 131 10 13 chr20 2890468 2890781 -69263101 - AluJb SINE Alu 0 312 1 2080 107 28 31 chr20 2890934 2891223 -69262659 + AluSx SINE Alu 2 289 -23 28 29 0 0 chr20 2891230 2891265 -69262617 + AT_rich Low_complexity Low_complexity 1 35 0 1116 254 43 15 chr20 2891265 2891659 -69262223 - L1M4 LINE L1 -1056 5090 4686 875 175 0 0 chr20 2891659 2891802 -69262080 - FLAM_C SINE Alu 0 143 1 2007 242 104 19 chr20 2891804 2891901 -69261981 - L1M4 LINE L1 -1433 4713 4626 1727 134 4 4 chr20 2891901 2892154 -69261728 + AluSx SINE Alu 51 303 -9 2007 242 104 19 chr20 2892154 2892875 -69261007 - L1M4 LINE L1 -1520 4626 3826 1863 120 4 0 chr20 2892936 2893186 -69260696 - AluSx SINE Alu -61 251 1 2047 137 10 3 chr20 2894809 2895102 -69258780 - AluJo SINE Alu -17 295 1 973 252 114 26 chr20 2895139 2895559 -69258323 - LTR16A1 LTR ERVL 0 457 1 2229 88 0 7 chr20 2896095 2896425 -69257457 + AluSx SINE Alu 1 328 0 2658 219 91 87 chr20 2896736 2896823 -69257059 + L1MD2 LINE L1 5 90 -6450 1680 140 63 14 chr20 2896823 2897109 -69256773 + AluJo SINE Alu 11 310 -2 2658 219 91 87 chr20 2897109 2898028 -69255854 + L1MD2 LINE L1 90 1015 -5525 1122 129 0 35 chr20 2898041 2898211 -69255671 - FRAM SINE Alu -15 161 1 1902 200 45 42 chr20 2898211 2898272 -69255610 + L1MD2 LINE L1 1000 1059 -5481 2503 70 3 0 chr20 2898272 2898571 -69255311 + AluSp SINE Alu 1 300 -13 1902 200 45 42 chr20 2898571 2899061 -69254821 + L1MD2 LINE L1 1059 1556 -4984 1990 181 3 0 chr20 2899061 2899370 -69254512 + AluJb SINE Alu 1 310 -2 1902 200 45 42 chr20 2899370 2899411 -69254471 + L1MD2 LINE L1 1556 1595 -4945 2377 95 7 0 chr20 2899481 2899786 -69254096 - AluSc SINE Alu -2 307 1 1956 164 7 0 chr20 2899790 2900089 -69253793 - AluJo SINE Alu -11 301 1 1734 129 126 0 chr20 2900323 2900609 -69253273 - AluSx SINE Alu 0 318 1 241 220 40 0 chr20 2900740 2900790 -69253092 - MER91 DNA MER1_type -12 178 127 1703 309 40 6 chr20 2900870 2901375 -69252507 - HERV16 LTR ERVL -1925 3071 2550 1628 230 25 77 chr20 2901387 2901872 -69252010 + L1MD2 LINE L1 4250 4759 -1781 1775 167 10 10 chr20 2901872 2902172 -69251710 + AluJo SINE Alu 1 300 -12 1628 230 25 77 chr20 2902172 2902292 -69251590 + L1MD2 LINE L1 4759 4884 -1656 1775 171 42 36 chr20 2902292 2902512 -69251370 - MLT1B LTR MaLR 0 390 166 2223 109 7 0 chr20 2902512 2902806 -69251076 - AluSx SINE Alu -11 301 6 1775 171 42 36 chr20 2902806 2902971 -69250911 - MLT1B LTR MaLR -224 166 3 1628 230 25 77 chr20 2902971 2903140 -69250742 + L1MD2 LINE L1 4884 4928 -1612 2176 109 7 0 chr20 2903140 2903455 -69250427 - AluSg SINE Alu 0 317 1 1628 230 25 77 chr20 2903455 2903640 -69250242 + L1MD2 LINE L1 4928 5121 -1419 2366 109 0 0 chr20 2903679 2903981 -69249901 - AluSx SINE Alu -10 302 1 4683 159 28 57 chr20 2903991 2904036 -69249846 - L1MB4 LINE L1 -2 6178 6133 701 200 0 15 chr20 2904036 2904171 -69249711 - FLAM_A SINE Alu 0 133 1 4683 159 28 57 chr20 2904171 2904811 -69249071 - L1MB4 LINE L1 -47 6133 5476 2119 140 7 0 chr20 2904811 2905119 -69248763 - AluSx SINE Alu -2 310 1 4683 159 28 57 chr20 2905119 2905298 -69248584 - L1MB4 LINE L1 -704 5476 5293 2432 35 35 7 chr20 2905298 2905585 -69248297 + AluY SINE Alu 1 295 -16 4683 159 28 57 chr20 2905585 2905985 -69247897 - L1MB4 LINE L1 -887 5293 4924 1860 212 32 4 chr20 2905971 2906438 -69247444 + L1MD2 LINE L1 5113 5592 -948 * 3651 188 61 42 chr20 2907095 2908089 -69245793 + L1MD2 LINE L1 5583 6545 -208 237 292 0 0 chr20 2908138 2908203 -69245679 + L1MD3 LINE L1 7798 7862 -133 1214 129 40 49 chr20 2908206 2908280 -69245602 - MLT1B LTR MaLR 0 390 317 2205 125 0 0 chr20 2908280 2908575 -69245307 + AluSx SINE Alu 2 296 -16 1214 129 40 49 chr20 2908575 2908725 -69245157 - MLT1B LTR MaLR -73 317 168 707 185 37 0 chr20 2908726 2908861 -69245021 - FLAM_C SINE Alu -2 141 2 852 148 56 0 chr20 2908861 2909023 -69244859 - MLT1B LTR MaLR -216 174 4 411 207 86 9 chr20 2909024 2909140 -69244742 + L1MD2 LINE L1 6616 6740 -13 2177 121 14 3 chr20 2909140 2909437 -69244445 + AluSx SINE Alu 1 300 -12 2528 70 3 0 chr20 2909439 2909739 -69244143 + AluSp SINE Alu 3 303 -10 2433 210 85 2 chr20 2909740 2910330 -69243552 + L1ME1 LINE L1 5312 5950 -216 869 233 65 71 chr20 2910325 2910451 -69243431 - L1M4c LINE L1 -3921 2463 2338 * 2272 125 0 0 chr20 2910451 2910762 -69243120 - AluJb SINE Alu -1 311 1 869 233 65 71 chr20 2910762 2910823 -69243059 - L1M4c LINE L1 -4046 2338 2278 2413 68 0 0 chr20 2910823 2911143 -69242739 - AluSc SINE Alu 0 320 1 869 233 65 71 chr20 2911143 2911519 -69242363 - L1M4c LINE L1 -4106 2278 2025 486 151 41 27 chr20 2911530 2911676 -69242206 - L1MB8 LINE L1 0 6178 6031 601 226 0 0 chr20 2911686 2911801 -69242081 + AluJo SINE Alu 1 115 -187 931 129 57 0 chr20 2911801 2911941 -69241941 + AluJo SINE Alu 162 309 -3 922 175 5 47 chr20 2911949 2912160 -69241722 - L1MB5 LINE L1 -154 6020 5819 2203 133 0 16 chr20 2912161 2912477 -69241405 - AluSx SINE Alu -1 311 1 1164 197 21 45 chr20 2912477 2912766 -69241116 - L1M4c LINE L1 -4728 1656 1375 571 209 67 52 chr20 2912766 2912870 -69241012 + L1ME1 LINE L1 5936 6037 -129 2416 78 0 0 chr20 2912870 2913166 -69240716 - AluY SINE Alu -15 296 1 571 209 67 52 chr20 2913166 2913271 -69240611 + L1ME1 LINE L1 6037 6148 -18 1976 91 65 18 chr20 2913301 2913577 -69240305 - AluSc SINE Alu -20 289 1 1902 133 16 42 chr20 2913632 2913940 -69239942 - AluSp SINE Alu -12 301 2 574 262 47 92 chr20 2913956 2914111 -69239771 - L1ME3A LINE L1 -80 6090 5930 1783 182 0 19 chr20 2914111 2914429 -69239453 - AluJo SINE Alu 0 312 1 574 262 47 92 chr20 2914429 2914615 -69239267 - L1ME3A LINE L1 -240 5930 5773 1843 173 7 10 chr20 2914615 2914922 -69238960 - AluJb SINE Alu -6 306 1 574 262 47 92 chr20 2914922 2915048 -69238834 - L1ME3A LINE L1 -397 5773 5643 246 211 32 32 chr20 2915476 2915571 -69238311 - L1ME3A LINE L1 -914 5386 5292 * 519 279 50 84 chr20 2915560 2915659 -69238223 - L1MEd LINE L1 -4862 1257 1156 2024 157 0 13 chr20 2915659 2915964 -69237918 + AluJb SINE Alu 1 301 -11 519 279 50 84 chr20 2915964 2915979 -69237903 - L1MEd LINE L1 -4963 1156 1142 1888 137 42 0 chr20 2915979 2916264 -69237618 + AluJo SINE Alu 9 305 -7 519 279 50 84 chr20 2916264 2916516 -69237366 - L1MEd LINE L1 -4977 1142 883 183 114 0 0 chr20 2916516 2916551 -69237331 + (TA)n Simple_repeat Simple_repeat 1 35 0 1884 107 95 4 chr20 2916551 2916814 -69237068 - AluSx SINE Alu -25 287 1 519 279 50 84 chr20 2916814 2916979 -69236903 - L1MEd LINE L1 -5234 885 741 1997 102 65 0 chr20 2917217 2917492 -69236390 + AluSx SINE Alu 1 293 -19 180 0 0 0 chr20 2917492 2917512 -69236370 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 476 232 21 49 chr20 2917920 2918062 -69235820 + LTR67 LTR ERVL 410 547 -10 769 244 34 21 chr20 2918141 2918375 -69235507 + L1ME3A LINE L1 5934 6170 0 313 291 30 61 chr20 2918574 2918739 -69235143 + LTR33A LTR ERVL 1 160 -363 1421 135 54 58 chr20 2918932 2919192 -69234690 - AluJb SINE Alu -53 259 1 365 235 20 10 chr20 2919197 2919299 -69234583 + LTR33A LTR ERVL 421 523 0 221 321 55 41 chr20 2925053 2925271 -69228611 + L2 LINE L2 2909 3129 -143 439 257 0 11 chr20 2925930 2926109 -69227773 + (TG)n Simple_repeat Simple_repeat 1 177 0 224 265 0 15 chr20 2926110 2926178 -69227704 + (CGTG)n Simple_repeat Simple_repeat 1 67 0 2364 157 105 0 chr20 2926733 2927192 -69226690 + MER84 LTR ERV1 1 507 0 2445 110 44 10 chr20 2927192 2927582 -69226300 + MER84-int LTR ERV1 1 403 -4551 906 141 17 57 chr20 2927554 2927731 -69226151 + MER84-int LTR ERV1 598 767 -4187 * 557 153 207 0 chr20 2927732 2927843 -69226039 + AluSp SINE Alu 2 135 -178 2063 107 0 61 chr20 2927843 2928171 -69225711 + AluSx SINE Alu 1 308 -4 6033 116 15 31 chr20 2928177 2929075 -69224807 + MER84-int LTR ERV1 755 1638 -3316 2101 106 29 0 chr20 2929075 2929376 -69224506 + AluSp SINE Alu 1 309 0 6033 116 15 31 chr20 2929376 2929467 -69224415 + MER84-int LTR ERV1 1638 1729 -3225 1099 138 6 29 chr20 2929470 2929644 -69224238 + AluSx SINE Alu 1 170 -142 2430 79 50 6 chr20 2929647 2929989 -69223893 + MER84-int LTR ERV1 4598 4954 0 2221 139 153 14 chr20 2929989 2930434 -69223448 + MER84 LTR ERV1 1 507 0 247 261 15 0 chr20 2930536 2930601 -69223281 - MIR SINE MIR -62 146 81 210 178 0 22 chr20 2930845 2930890 -69222992 + CT-rich Low_complexity Low_complexity 5 48 0 422 293 137 32 chr20 2931991 2932428 -69221454 + L2 LINE L2 2827 3309 -4 2427 88 3 0 chr20 2932605 2932911 -69220971 - AluY SINE Alu -4 307 1 448 262 54 30 chr20 2933371 2933539 -69220343 + MIR SINE MIR 29 200 -62 385 173 83 149 chr20 2933909 2933979 -69219903 + MER5A DNA MER1_type 4 77 -112 2199 91 9 61 chr20 2933979 2934308 -69219574 + AluSx SINE Alu 1 312 0 385 173 83 149 chr20 2934308 2934368 -69219514 + MER5A DNA MER1_type 77 123 -66 1792 95 13 0 chr20 2934368 2934600 -69219282 - AluSg/x SINE Alu -9 301 67 385 173 83 149 chr20 2934600 2934636 -69219246 + MER5A DNA MER1_type 123 160 -29 1020 171 40 72 chr20 2934865 2934910 -69218972 - AluJo SINE Alu -11 301 256 4467 54 3 17 chr20 2934910 2935245 -69218637 - LTR14C LTR ERVK 0 587 262 2508 59 0 7 chr20 2935245 2935551 -69218331 + AluY SINE Alu 1 304 -7 4467 54 3 17 chr20 2935551 2935810 -69218072 - LTR14C LTR ERVK -325 262 1 1020 171 40 72 chr20 2935810 2935937 -69217945 - AluJo SINE Alu -56 256 135 2426 84 3 7 chr20 2935937 2936246 -69217636 - AluSc SINE Alu -1 308 1 1020 171 40 72 chr20 2936246 2936294 -69217588 - AluJo SINE Alu -177 135 87 3529 120 22 25 chr20 2936309 2936535 -69217347 - L1PB3 LINE L1 -2 6152 5927 2439 74 7 7 chr20 2936535 2936845 -69217037 - AluY SINE Alu -1 310 1 3529 120 22 25 chr20 2936845 2936978 -69216904 - L1PB3 LINE L1 -227 5927 5795 369 0 0 0 chr20 2936978 2937019 -69216863 + (TG)n Simple_repeat Simple_repeat 1 41 0 3529 120 22 25 chr20 2937019 2937251 -69216631 - L1PB3 LINE L1 -359 5795 5562 2148 253 125 38 chr20 2937310 2937414 -69216468 - HAL1 LINE L1 -100 2407 2313 1960 155 16 7 chr20 2937414 2937718 -69216164 - AluSq SINE Alu 0 313 7 2148 253 125 38 chr20 2937718 2938661 -69215221 - HAL1 LINE L1 -194 2313 1269 2557 89 0 0 chr20 2938662 2938975 -69214907 + AluSq SINE Alu 1 313 0 404 183 0 0 chr20 2938980 2939051 -69214831 + LTR16A1 LTR ERVL 372 442 -15 1917 132 146 13 chr20 2939062 2939440 -69214442 + MSTA LTR MaLR 1 428 0 291 203 0 58 chr20 2939440 2939509 -69214373 + L2 LINE L2 3207 3271 -1 196 308 208 8 chr20 2943568 2943698 -69210184 + MIR SINE MIR 57 212 -50 310 330 0 9 chr20 2944551 2944657 -69209225 + MIR SINE MIR 48 152 -110 542 253 108 0 chr20 2945332 2945434 -69208448 + MER5A DNA MER1_type 9 135 -54 2339 104 7 0 chr20 2945434 2945733 -69208149 - AluSx SINE Alu -11 301 1 542 253 108 0 chr20 2945733 2945788 -69208094 + MER5A DNA MER1_type 135 183 -6 1250 43 10 34 chr20 2948287 2948494 -69205388 + SVA Other Other 665 866 -520 6637 79 13 47 chr20 2948518 2949717 -69204165 + SVA Other Other 431 1386 0 646 289 36 27 chr20 2949942 2950243 -69203639 - L1M4 LINE L1 -1993 4153 3850 * 936 234 98 8 chr20 2950212 2950273 -69203609 - L1MC2 LINE L1 -344 5818 5764 1833 160 0 45 chr20 2950273 2950585 -69203297 - AluSx SINE Alu -14 298 1 936 234 98 8 chr20 2950585 2950849 -69203033 - L1MC2 LINE L1 -398 5764 5547 5883 217 38 33 chr20 2951031 2951955 -69201927 + L1PA8 LINE L1 3811 4729 -1443 2387 92 0 16 chr20 2951955 2952259 -69201623 + AluSq SINE Alu 1 299 -14 5883 217 38 33 chr20 2952259 2953703 -69200179 + L1PA8 LINE L1 4729 6172 0 354 274 102 80 chr20 2953691 2953965 -69199917 + L1ME1 LINE L1 5885 6164 -2 * 1555 183 3 74 chr20 2953967 2954290 -69199592 - AluJo SINE Alu -12 300 1 2249 80 3 14 chr20 2954296 2954612 -69199270 - AluY SINE Alu 0 313 1 2200 119 0 0 chr20 2954788 2955107 -69198775 - AluSq SINE Alu 0 319 1 1303 126 0 88 chr20 2955110 2955349 -69198533 - AluSg/x SINE Alu -10 302 85 749 179 14 7 chr20 2955351 2955468 -69198414 - AluSg/x SINE Alu -59 253 133 1997 120 62 3 chr20 2955468 2955760 -69198122 - AluSq SINE Alu -4 309 1 749 179 14 7 chr20 2955760 2955782 -69198100 - AluSg/x SINE Alu -179 133 113 2524 69 3 3 chr20 2956275 2956580 -69197302 - AluY SINE Alu -6 305 1 1626 173 14 21 chr20 2956768 2957052 -69196830 + AluJb SINE Alu 1 282 -30 359 281 37 55 chr20 2957082 2957246 -69196636 + L1MCa LINE L1 1938 2098 -4328 652 222 0 28 chr20 2957627 2957771 -69196111 + FLAM_C SINE Alu 2 141 -2 1971 108 79 0 chr20 2958550 2958827 -69195055 + AluSc SINE Alu 1 299 -10 219 235 39 0 chr20 2958868 2958919 -69194963 - L2 LINE L2 -5 3267 3215 210 364 10 10 chr20 2960090 2960189 -69193693 + G-rich Low_complexity Low_complexity 3 101 0 198 183 83 83 chr20 2961327 2961387 -69192495 - L2 LINE L2 -7 3306 3247 181 362 121 17 chr20 2965285 2965459 -69188423 + L2 LINE L2 2693 2884 -430 2047 120 21 3 chr20 2965722 2966013 -69187869 - AluSx SINE Alu -16 296 1 795 196 18 0 chr20 2966114 2966282 -69187600 + FAM SINE Alu 1 171 -4 2031 125 33 0 chr20 2966292 2966564 -69187318 + AluSx SINE Alu 1 281 -31 345 326 0 0 chr20 2966580 2966669 -69187213 + L1MC4 LINE L1 6614 6702 -1340 314 346 0 9 chr20 2966603 2966710 -69187172 - L1MC4 LINE L1 -1323 6719 6614 * 294 231 0 0 chr20 2966720 2966863 -69187019 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 2447 102 0 0 chr20 2967110 2967415 -69186467 + AluSg SINE Alu 1 305 -5 764 222 111 34 chr20 2967862 2968069 -69185813 - MIR SINE MIR -8 254 32 492 335 119 36 chr20 2968640 2968966 -69184916 - L2 LINE L2 -216 3056 2759 324 0 0 0 chr20 2968966 2969002 -69184880 + (TG)n Simple_repeat Simple_repeat 2 37 0 492 335 119 36 chr20 2969002 2969352 -69184530 - L2 LINE L2 -513 2759 2315 321 217 0 0 chr20 2969489 2969556 -69184326 + FRAM/FAM SINE Alu 1 49 -117 3323 136 45 41 chr20 2969569 2970071 -69183811 - L1MB2 LINE L1 -7 6164 5657 2541 82 0 0 chr20 2970071 2970375 -69183507 - AluSx SINE Alu -8 304 1 3323 136 45 41 chr20 2970375 2970512 -69183370 - L1MB2 LINE L1 -514 5657 5522 229 367 64 56 chr20 2971302 2971440 -69182442 + L2 LINE L2 719 854 -2460 2411 95 0 0 chr20 2971440 2971735 -69182147 - AluSc SINE Alu -14 295 1 229 367 64 56 chr20 2971735 2972171 -69181711 + L2 LINE L2 854 1298 -2016 960 190 0 46 chr20 2972189 2972384 -69181498 - AluJb SINE Alu -1 311 126 1715 290 78 6 chr20 2972389 2972927 -69180955 - ERVL LTR ERVL -926 4838 4262 557 342 56 8 chr20 2972989 2973255 -69180627 - ERVL LTR ERVL -5042 722 444 2235 120 7 0 chr20 2973256 2973555 -69180327 - AluSp SINE Alu -10 303 3 257 226 215 57 chr20 2973938 2973998 -69179884 - LTR41 LTR ERVL 0 795 746 2172 117 0 7 chr20 2973998 2974305 -69179577 + AluSq SINE Alu 1 305 -8 2291 124 3 0 chr20 2974305 2974612 -69179270 + AluSc SINE Alu 1 308 -1 257 226 215 57 chr20 2974612 2974644 -69179238 - LTR41 LTR ERVL -49 746 720 1832 156 23 16 chr20 2974644 2974951 -69178931 + AluJb SINE Alu 1 309 -3 257 226 215 57 chr20 2974951 2975100 -69178782 - LTR41 LTR ERVL -75 720 510 1044 94 0 0 chr20 2975285 2975413 -69178469 + AluSp SINE Alu 1 128 -185 1806 88 4 0 chr20 2975414 2975640 -69178242 + AluSq SINE Alu 76 302 -11 2322 76 3 7 chr20 2975646 2975934 -69177948 + AluY SINE Alu 1 287 -24 745 177 37 18 chr20 2976216 2976380 -69177502 - LTR41 LTR ERVL -604 169 3 13676 110 40 41 chr20 2976500 2977067 -69176815 - Tigger1 DNA MER2_type 0 2418 1852 2229 129 7 0 chr20 2977067 2977377 -69176505 + AluSx SINE Alu 1 312 0 13676 110 40 41 chr20 2977377 2977623 -69176259 - Tigger1 DNA MER2_type -566 1852 1607 2427 104 0 0 chr20 2977623 2977931 -69175951 - AluSx SINE Alu -4 308 1 13676 110 40 41 chr20 2977931 2978085 -69175797 - Tigger1 DNA MER2_type -811 1607 1454 1356 189 47 47 chr20 2978085 2978197 -69175685 + AluJo SINE Alu 1 112 -200 243 0 0 0 chr20 2978197 2978224 -69175658 + (CA)n Simple_repeat Simple_repeat 2 28 0 1356 189 47 47 chr20 2978224 2978440 -69175442 + AluJo SINE Alu 111 312 0 13676 110 40 41 chr20 2978440 2978470 -69175412 - Tigger1 DNA MER2_type -964 1454 1425 2401 112 0 6 chr20 2978470 2978784 -69175098 + AluSx SINE Alu 1 312 0 13676 110 40 41 chr20 2978784 2978919 -69174963 - Tigger1 DNA MER2_type -993 1425 1291 2356 98 3 0 chr20 2978919 2979216 -69174666 - AluSg SINE Alu -12 298 1 13676 110 40 41 chr20 2979216 2980499 -69173383 - Tigger1 DNA MER2_type -1127 1291 1 327 287 97 100 chr20 2980715 2980924 -69172958 - L1M4 LINE L1 -1290 4856 4647 2371 106 3 0 chr20 2980924 2981235 -69172647 - AluSx SINE Alu 0 312 1 327 287 97 100 chr20 2981235 2981426 -69172456 - L1M4 LINE L1 -1499 4647 4457 1305 103 0 17 chr20 2981461 2981635 -69172247 - AluSg/x SINE Alu -8 304 134 1840 134 4 15 chr20 2981635 2981933 -69171949 - AluSq SINE Alu 0 313 36 266 261 77 70 chr20 2981976 2982059 -69171823 - L1P LINE L1 -1809 4337 4256 1857 152 0 40 chr20 2982059 2982355 -69171527 - AluJb SINE Alu -18 294 11 266 261 77 70 chr20 2982355 2982517 -69171365 - L1P LINE L1 -1890 4256 4089 1651 197 33 0 chr20 2982975 2983275 -69170607 + AluJo SINE Alu 1 310 -2 203 220 68 0 chr20 2983773 2983832 -69170050 + L2 LINE L2 64 126 -3188 2370 98 3 0 chr20 2987440 2987736 -69166146 + AluSx SINE Alu 2 298 -14 241 169 34 0 chr20 2987763 2987822 -69166060 + GA-rich Low_complexity Low_complexity 4 64 0 338 236 185 38 chr20 2990971 2991128 -69162754 - MIR SINE MIR -37 225 46 878 236 152 26 chr20 2991823 2992225 -69161657 - MLT1G3 LTR MaLR -51 539 16 697 136 7 102 chr20 2992228 2992375 -69161507 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 2992531 2992561 -69161321 + (T)n Simple_repeat Simple_repeat 1 30 0 294 241 60 65 chr20 2992996 2993212 -69160670 - L1MC4 LINE L1 -2 8040 7826 322 225 25 0 chr20 2993254 2993334 -69160548 - L1ME2 LINE L1 -10 6154 6073 2146 88 10 34 chr20 2993596 2993891 -69159991 + AluSq SINE Alu 1 288 -25 2505 70 3 3 chr20 2993999 2994301 -69159581 + AluSq SINE Alu 1 302 -11 404 273 148 34 chr20 2994338 2994547 -69159335 + L2 LINE L2 3079 3311 -2 202 196 20 15 chr20 2994548 2994615 -69159267 - MIR SINE MIR -68 140 84 195 152 0 0 chr20 2997076 2997109 -69156773 + MIR SINE MIR 117 149 -113 22 0 0 0 chr20 2997296 2997318 -69156564 + GC_rich Low_complexity Low_complexity 1 22 0 36 40 0 0 chr20 2997533 2997583 -69156299 + GC_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr20 2998250 2998279 -69155603 + AT_rich Low_complexity Low_complexity 1 29 0 198 314 26 84 chr20 2998601 2998792 -69155090 + L2 LINE L2 2695 2874 -440 191 296 163 10 chr20 2999399 2999497 -69154385 - L2 LINE L2 -17 3255 3143 195 305 203 0 chr20 2999542 2999670 -69154212 - MIR SINE MIR 0 262 109 254 314 91 54 chr20 2999741 2999983 -69153899 - L2 LINE L2 -193 3079 2829 441 265 134 87 chr20 3000370 3000721 -69153161 - L1MC4a LINE L1 -273 5889 5527 218 298 36 36 chr20 3000815 3000899 -69152983 - MIR3 SINE MIR -36 172 89 2137 106 7 0 chr20 3001155 3001469 -69152413 - AluSp SINE Alu 0 318 3 2534 70 0 0 chr20 3001783 3002081 -69151801 + AluSc SINE Alu 1 298 -11 1955 131 20 16 chr20 3002116 3002422 -69151460 - AluJb SINE Alu -5 307 1 259 265 211 31 chr20 3002439 3002662 -69151220 - L1ME LINE L1 -356 5765 5503 280 392 21 0 chr20 3002923 3003020 -69150862 - L2 LINE L2 -40 3232 3134 556 239 148 7 chr20 3003164 3003319 -69150563 - MER5A DNA MER1_type 0 189 13 712 203 16 60 chr20 3003409 3003535 -69150347 - MER5B DNA MER1_type -1 177 60 2060 168 24 0 chr20 3003535 3003875 -69150007 + MER7A DNA MER2_type 1 346 0 712 203 16 60 chr20 3003875 3003930 -69149952 - MER5B DNA MER1_type -118 60 4 384 261 50 37 chr20 3003947 3004108 -69149774 - L2 LINE L2 -473 2841 2679 2595 220 132 81 chr20 3004133 3004657 -69149225 + Charlie7 DNA MER1_type 38 534 -2078 1691 127 54 14 chr20 3004657 3004933 -69148949 + AluJo SINE Alu 7 293 -19 2096 114 0 17 chr20 3004939 3005236 -69148646 + AluSc SINE Alu 1 292 -17 2595 220 132 81 chr20 3005236 3005432 -69148450 + Charlie7 DNA MER1_type 538 723 -1889 986 163 12 25 chr20 3005432 3005592 -69148290 - FRAM SINE Alu -8 158 1 2595 220 132 81 chr20 3005592 3005631 -69148251 + Charlie7 DNA MER1_type 723 759 -1853 2196 120 10 0 chr20 3005631 3005939 -69147943 + AluSx SINE Alu 1 311 -1 2595 220 132 81 chr20 3005939 3006192 -69147690 + Charlie7 DNA MER1_type 759 998 -1614 1718 159 23 29 chr20 3006192 3006501 -69147381 - AluJb SINE Alu 0 312 6 2595 220 132 81 chr20 3006501 3006701 -69147181 + Charlie7 DNA MER1_type 998 1322 -1290 1258 117 0 22 chr20 3006888 3007068 -69146814 - AluJb SINE Alu -7 305 130 655 121 0 0 chr20 3007069 3007168 -69146714 + MER46A DNA MER2_type 138 236 0 431 139 28 65 chr20 3007169 3007277 -69146605 + Charlie7 DNA MER1_type 1695 1798 -814 2890 6 0 0 chr20 3007283 3007594 -69146288 + AluY SINE Alu 1 311 0 4594 147 42 50 chr20 3007653 3008633 -69145249 - L1MB7 LINE L1 -21 6163 5195 1188 175 79 32 chr20 3008626 3008708 -69145174 - L1M4 LINE L1 -486 5692 5615 * 2458 66 27 0 chr20 3008708 3009009 -69144873 - AluY SINE Alu 0 311 3 1188 175 79 32 chr20 3009009 3009206 -69144676 - L1M4 LINE L1 -563 5615 5400 273 118 79 13 chr20 3009224 3009300 -69144582 + Charlie7 DNA MER1_type 1890 1970 -642 266 200 0 0 chr20 3009326 3009376 -69144506 + L1MC5 LINE L1 7184 7233 -728 1279 226 52 65 chr20 3009575 3009694 -69144188 + L1MC5 LINE L1 7397 7516 -445 2264 93 17 0 chr20 3009694 3009984 -69143898 + AluSg SINE Alu 1 295 -15 1279 226 52 65 chr20 3009984 3010400 -69143482 + L1MC5 LINE L1 7516 7925 -36 679 232 255 50 chr20 3010424 3010473 -69143409 + Charlie7 DNA MER1_type 1970 2008 -604 2362 80 3 37 chr20 3010473 3010797 -69143085 + AluSp SINE Alu 1 313 0 679 232 255 50 chr20 3010797 3011272 -69142610 + Charlie7 DNA MER1_type 2008 2602 -10 1846 145 26 23 chr20 3012188 3012492 -69141390 + AluJo SINE Alu 1 305 -7 1665 162 3 46 chr20 3013805 3014107 -69139775 - AluJo SINE Alu -23 289 1 509 299 72 5 chr20 3014219 3014426 -69139456 + MIR SINE MIR 34 254 -8 315 343 204 20 chr20 3014604 3015213 -69138669 + L2 LINE L2 1983 2703 -611 1146 155 23 50 chr20 3015619 3015838 -69138044 + MER2 DNA MER2_type 1 213 -132 2274 118 0 0 chr20 3015918 3016224 -69137658 + AluSx SINE Alu 1 306 -6 2468 173 9 24 chr20 3016271 3016693 -69137189 + MER47B DNA MER2_type 2 417 -1 297 239 28 73 chr20 3017025 3017134 -69136748 + L2 LINE L2 3179 3282 -31 239 333 9 26 chr20 3018259 3018373 -69135509 - MER102b DNA MER1_type 0 341 230 834 182 8 0 chr20 3018385 3018517 -69135365 - FLAM_C SINE Alu 0 133 1 2437 60 0 10 chr20 3018615 3018916 -69134966 + AluY SINE Alu 1 298 -13 2008 122 3 28 chr20 3018983 3019294 -69134588 - AluSx SINE Alu 0 304 1 1845 129 3 44 chr20 3019420 3019739 -69134143 - AluSx SINE Alu 0 307 1 259 241 85 14 chr20 3019862 3020003 -69133879 - L1M4 LINE L1 -3219 2927 2777 2364 86 0 13 chr20 3020003 3020317 -69133565 + AluSx SINE Alu 1 310 -2 4415 177 50 111 chr20 3020397 3021291 -69132591 - L1MC4 LINE L1 -70 7972 7025 2275 114 0 0 chr20 3021291 3021598 -69132284 - AluSx SINE Alu -5 307 1 4415 177 50 111 chr20 3021598 3021814 -69132068 - L1MC4 LINE L1 -1017 7025 6797 2256 107 0 35 chr20 3021814 3021997 -69131885 - AluSq SINE Alu -5 308 139 2318 52 58 3 chr20 3021997 3022288 -69131594 - AluY SINE Alu -3 308 2 2256 107 0 35 chr20 3022288 3022423 -69131459 - AluSq SINE Alu -174 139 1 4415 177 50 111 chr20 3022423 3022485 -69131397 - L1MC4 LINE L1 -1245 6797 6888 2342 92 0 0 chr20 3022485 3022779 -69131103 + AluSx SINE Alu 1 294 -18 4415 177 50 111 chr20 3022779 3022959 -69130923 - L1MC4 LINE L1 -1153 6889 6700 979 120 0 63 chr20 3022977 3023135 -69130747 + AluSx SINE Alu 25 172 -140 562 239 90 21 chr20 3023181 3023369 -69130513 - MER74A LTR ERVL -5 553 353 355 318 0 16 chr20 3023587 3023716 -69130166 - L1MC4 LINE L1 -1378 6664 6538 2035 126 0 11 chr20 3023734 3024044 -69129838 + AluSx SINE Alu 1 307 0 752 165 85 73 chr20 3024057 3024221 -69129661 - FRAM SINE Alu 0 166 1 415 256 0 0 chr20 3024354 3024440 -69129442 + Tigger6 DNA MER2_type 1 86 -1511 2409 78 0 3 chr20 3024489 3024784 -69129098 + AluSq SINE Alu 5 298 -15 2150 97 4 0 chr20 3024873 3025180 -69128702 - AluSg SINE Alu 0 308 1 2194 120 3 0 chr20 3025795 3026096 -69127786 - AluSx SINE Alu -10 302 1 984 228 53 22 chr20 3026825 3026953 -69126929 + MIR SINE MIR 25 165 -97 1488 119 38 38 chr20 3026953 3027189 -69126693 + MER46A DNA MER2_type 1 236 0 984 228 53 22 chr20 3027189 3027288 -69126594 + MIR SINE MIR 165 259 -3 1702 191 3 7 chr20 3027316 3027614 -69126268 + AluJo SINE Alu 1 297 -15 1544 167 20 40 chr20 3027824 3028124 -69125758 - AluJo SINE Alu -18 294 1 2224 100 7 3 chr20 3028300 3028600 -69125282 + AluSc SINE Alu 1 301 -8 1953 158 42 36 chr20 3028859 3029194 -69124688 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr20 3029407 3029428 -69124454 + AT_rich Low_complexity Low_complexity 1 21 0 2160 108 30 3 chr20 3029599 3029896 -69123986 - AluSp SINE Alu -8 305 1 7886 178 69 69 chr20 3030329 3032186 -69121696 - Cheshire DNA MER1_type -18 2402 542 694 177 123 140 chr20 3032186 3032429 -69121453 - MER8 DNA MER2_type 0 239 1 7886 178 69 69 chr20 3032429 3032520 -69121362 - Cheshire DNA MER1_type -1878 542 453 909 124 0 36 chr20 3032521 3032658 -69121224 + FLAM_C SINE Alu 1 132 -11 260 213 148 0 chr20 3032670 3032731 -69121151 - Cheshire DNA MER1_type -1953 467 398 572 221 8 30 chr20 3032787 3032918 -69120964 - Cheshire DNA MER1_type -2002 418 291 691 209 9 0 chr20 3033091 3033222 -69120660 + AluJb SINE Alu 174 305 0 1981 117 50 3 chr20 3033222 3033520 -69120362 + AluSx SINE Alu 1 312 0 465 202 71 0 chr20 3033536 3033635 -69120247 - Cheshire DNA MER1_type -2184 236 131 512 108 54 6 chr20 3033639 3033806 -69120076 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 22 80 0 0 chr20 3033817 3033867 -69120015 + AT_rich Low_complexity Low_complexity 1 50 0 412 44 44 81 chr20 3033867 3034169 -69119713 + (TA)n Simple_repeat Simple_repeat 1 290 0 289 79 110 12 chr20 3034191 3034355 -69119527 + (TA)n Simple_repeat Simple_repeat 1 180 0 28 0 0 0 chr20 3034362 3034390 -69119492 + AT_rich Low_complexity Low_complexity 1 28 0 905 136 268 132 chr20 3034391 3034505 -69119377 - AluJo SINE Alu 0 302 205 2494 68 10 7 chr20 3034505 3034815 -69119067 - AluY SINE Alu 0 311 1 905 136 268 132 chr20 3034815 3034965 -69118917 - AluJo SINE Alu -97 205 2 25 51 0 0 chr20 3035005 3035044 -69118838 + AT_rich Low_complexity Low_complexity 1 39 0 1893 155 0 14 chr20 3035871 3036167 -69117715 + AluJb SINE Alu 1 292 -20 2004 136 0 13 chr20 3036248 3036556 -69117326 + AluJb SINE Alu 1 304 -8 256 220 20 0 chr20 3036609 3036659 -69117223 + MER3 DNA MER1_type 41 91 -118 * 391 174 47 23 chr20 3036633 3036719 -69117163 - MER3 DNA MER1_type -120 89 2 4243 217 100 26 chr20 3036873 3037004 -69116878 - L1MC4 LINE L1 0 7808 7688 2173 125 0 7 chr20 3037004 3037308 -69116574 + AluSx SINE Alu 1 302 -10 4243 217 100 26 chr20 3037308 3038356 -69115526 - L1MC4 LINE L1 -120 7688 6588 315 0 0 0 chr20 3038356 3038391 -69115491 + (TG)n Simple_repeat Simple_repeat 2 36 0 4243 217 100 26 chr20 3038391 3038550 -69115332 - L1MC4 LINE L1 -1220 6588 6442 1108 268 7 30 chr20 3038649 3038918 -69114964 - MER82 DNA MER2_type 0 653 391 949 122 6 72 chr20 3038918 3038989 -69114893 - L1MB5 LINE L1 -287 5887 5813 997 188 11 23 chr20 3038989 3039165 -69114717 - FAM SINE Alu 0 175 2 949 122 6 72 chr20 3039165 3039274 -69114608 - L1MB5 LINE L1 -361 5813 5719 1938 152 104 89 chr20 3039277 3039616 -69114266 - L1MB5 LINE L1 -748 5398 5065 1637 156 54 4 chr20 3039616 3039892 -69113990 + AluSx SINE Alu 1 290 -22 1938 152 104 89 chr20 3039892 3039944 -69113938 - L1MB5 LINE L1 -1081 5065 5015 1984 126 3 13 chr20 3039944 3040245 -69113637 - AluJb SINE Alu -6 306 9 1938 152 104 89 chr20 3040245 3040400 -69113482 - L1MB5 LINE L1 -1131 5015 4843 417 279 0 0 chr20 3040400 3040486 -69113396 + AluJ/FLAM SINE Alu 5 90 -222 * 844 175 91 0 chr20 3040482 3040636 -69113246 + AluJo/FRAM SINE Alu 136 303 -9 1198 177 12 36 chr20 3040636 3040858 -69113024 - L1MB5 LINE L1 -1291 4855 4638 2270 92 3 3 chr20 3040858 3041152 -69112730 - AluSx SINE Alu -2 310 17 1198 177 12 36 chr20 3041152 3041178 -69112704 - L1MB5 LINE L1 -1508 4638 4613 468 304 112 25 chr20 3041221 3041586 -69112296 - L1MEd LINE L1 -5710 409 13 814 164 25 0 chr20 3041601 3041723 -69112159 + FLAM_A SINE Alu 1 125 -8 2105 101 0 0 chr20 3041742 3042019 -69111863 + AluSg1 SINE Alu 24 300 -9 571 177 113 40 chr20 3042101 3042225 -69111657 - FLAM_A SINE Alu 0 133 1 558 267 53 65 chr20 3042699 3042961 -69110921 + MIR SINE MIR 4 262 0 280 257 135 0 chr20 3043379 3043453 -69110429 - L2 LINE L2 -26 3246 3163 595 159 62 9 chr20 3043455 3043568 -69110314 - FRAM SINE Alu -13 163 45 1441 209 95 0 chr20 3043714 3044020 -69109862 + MER58B DNA MER1_type 4 338 -3 422 189 32 162 chr20 3044242 3044427 -69109455 - MER5B DNA MER1_type -1 177 17 180 0 0 0 chr20 3045233 3045253 -69108629 + (T)n Simple_repeat Simple_repeat 1 20 0 327 329 89 0 chr20 3045560 3045718 -69108164 - LTR16A LTR ERVL -3 447 276 986 196 16 21 chr20 3045819 3046008 -69107874 - MER20 DNA MER1_type -1 218 31 225 0 0 0 chr20 3046245 3046270 -69107612 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2203 89 0 7 chr20 3046270 3046552 -69107330 - AluSx SINE Alu -32 280 1 2104 124 10 0 chr20 3046555 3046845 -69107037 - AluSx SINE Alu -19 293 1 1121 207 50 0 chr20 3046846 3047068 -69106814 - AluJo SINE Alu -21 291 59 21 0 0 0 chr20 3047313 3047334 -69106548 + AT_rich Low_complexity Low_complexity 1 21 0 194 262 24 0 chr20 3047358 3047400 -69106482 + MER5B DNA MER1_type 7 49 -129 2244 106 3 3 chr20 3047427 3047729 -69106153 + AluSq SINE Alu 1 302 -11 1447 223 58 81 chr20 3047804 3048047 -69105835 + L1ME3 LINE L1 5541 5788 -374 1681 144 53 14 chr20 3048047 3048331 -69105551 + AluSg SINE Alu 1 295 -15 1447 223 58 81 chr20 3048331 3048594 -69105288 + L1ME3 LINE L1 5788 6037 -125 2311 102 0 0 chr20 3048594 3048889 -69104993 - AluSc SINE Alu -14 295 1 1447 223 58 81 chr20 3048889 3048914 -69104968 + L1ME3 LINE L1 6037 6061 -101 3759 131 20 70 chr20 3048935 3049442 -69104440 - L1MB3 LINE L1 -12 6171 5707 2202 115 6 13 chr20 3049442 3049756 -69104126 + AluSx SINE Alu 1 312 0 3759 131 20 70 chr20 3049756 3049950 -69103932 - L1MB3 LINE L1 -476 5707 5505 1475 168 185 45 chr20 3050124 3050526 -69103356 - MLT1C LTR MaLR -2 465 8 259 218 0 0 chr20 3050516 3050571 -69103311 + AluJ/monomer SINE Alu 247 301 -1 * 192 152 0 0 chr20 3050644 3050677 -69103205 + CT-rich Low_complexity Low_complexity 2 34 0 2308 108 0 6 chr20 3050687 3051001 -69102881 - AluSx SINE Alu 0 312 1 760 71 152 0 chr20 3051001 3051113 -69102769 - AluSc SINE Alu -176 133 5 2093 116 0 0 chr20 3051642 3051918 -69101964 + AluSx SINE Alu 5 280 -32 195 100 0 0 chr20 3051918 3051948 -69101934 + (CAAT)n Simple_repeat Simple_repeat 4 33 0 602 238 106 58 chr20 3051954 3052030 -69101852 - HAL1 LINE L1 -796 1711 1640 207 0 0 0 chr20 3052030 3052053 -69101829 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1983 84 103 0 chr20 3052055 3052318 -69101564 - AluY SINE Alu -21 290 1 602 238 106 58 chr20 3052318 3052549 -69101333 - HAL1 LINE L1 -867 1640 1386 326 259 26 0 chr20 3052613 3052729 -69101153 - HAL1 LINE L1 -1279 1228 1110 1786 161 47 3 chr20 3052729 3053027 -69100855 - AluJb SINE Alu -1 311 1 1048 82 7 7 chr20 3053027 3053162 -69100720 - AluJb SINE Alu -177 135 1 1646 158 18 52 chr20 3053430 3053453 -69100429 + MLT1B LTR MaLR 74 96 -294 1915 180 0 0 chr20 3053453 3053753 -69100129 + AluJo SINE Alu 1 300 -12 1646 158 18 52 chr20 3053753 3054057 -69099825 + MLT1B LTR MaLR 96 390 0 2186 154 103 19 chr20 3054357 3054786 -69099096 - MLT1C LTR MaLR -2 465 1 194 284 32 42 chr20 3054991 3055086 -69098796 + MER5A DNA MER1_type 57 150 -39 261 0 0 0 chr20 3055629 3055658 -69098224 + (TG)n Simple_repeat Simple_repeat 2 30 0 688 159 130 22 chr20 3055660 3055798 -69098084 - FRAM SINE Alu -30 146 1 212 226 189 0 chr20 3055803 3055856 -69098026 + L2 LINE L2 3208 3270 -2 276 317 30 10 chr20 3055891 3055992 -69097890 + L2 LINE L2 3208 3310 -3 389 209 129 25 chr20 3057073 3057236 -69096646 - L1MC/D LINE L1 -2322 5486 5307 1914 147 3 22 chr20 3057327 3057346 -69096536 - AluSx SINE Alu -5 307 289 288 0 0 0 chr20 3057346 3057378 -69096504 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 1914 147 3 22 chr20 3057378 3057671 -69096211 - AluSx SINE Alu -23 289 1 1511 165 8 12 chr20 3058051 3058306 -69095576 - AluJb SINE Alu -49 263 10 289 148 136 34 chr20 3058482 3058570 -69095312 - L1MD3 LINE L1 0 7995 7899 2222 116 3 0 chr20 3058580 3058882 -69095000 - AluSx SINE Alu -9 303 1 3520 117 10 54 chr20 3058954 3059480 -69094402 - L1MA8 LINE L1 -181 6110 5612 1254 189 96 62 chr20 3059480 3059645 -69094237 - AluJo SINE Alu -1 301 120 2090 120 0 13 chr20 3059645 3059944 -69093938 + AluSq SINE Alu 3 297 -16 1254 189 96 62 chr20 3059944 3060069 -69093813 - AluJo SINE Alu -182 120 1 3520 117 10 54 chr20 3060069 3060139 -69093743 - L1MA8 LINE L1 -679 5612 5540 2806 185 125 146 chr20 3060193 3060238 -69093644 - L1ME LINE L1 -3890 2650 2606 901 148 0 15 chr20 3060238 3060373 -69093509 - FLAM_C SINE Alu 0 133 1 1805 137 3 45 chr20 3060379 3060671 -69093211 - AluJb SINE Alu -20 292 13 2806 185 125 146 chr20 3060671 3061028 -69092854 - L1ME LINE L1 -3939 2601 2238 2329 105 0 3 chr20 3061028 3061332 -69092550 - AluSc SINE Alu -5 304 2 2806 185 125 146 chr20 3061332 3061948 -69091934 - L1ME LINE L1 -4302 2238 1610 833 183 0 0 chr20 3061948 3062068 -69091814 + FLAM_C SINE Alu 2 121 -22 2806 185 125 146 chr20 3062068 3062087 -69091795 - L1ME LINE L1 -4930 1610 1592 2209 117 0 3 chr20 3062087 3062394 -69091488 - AluSx SINE Alu -4 308 3 2806 185 125 146 chr20 3062394 3063262 -69090620 - L1ME LINE L1 -4948 1592 730 953 244 29 77 chr20 3063432 3063735 -69090147 - L1ME LINE L1 -6181 359 76 2375 84 0 10 chr20 3063735 3064046 -69089836 + AluSq SINE Alu 1 308 -5 953 244 29 77 chr20 3064046 3064119 -69089763 - L1ME LINE L1 -6464 76 1 765 200 0 15 chr20 3064230 3064365 -69089517 - FLAM_A SINE Alu 0 133 1 291 346 0 0 chr20 3064396 3064474 -69089408 + MER58 DNA MER1_type 1 78 -263 719 165 9 0 chr20 3064475 3064590 -69089292 - AluJb SINE Alu -15 297 182 683 183 107 0 chr20 3064616 3064747 -69089135 + MER58 DNA MER1_type 142 2365 -55 2281 83 6 22 chr20 3064924 3065236 -69088646 - AluSx SINE Alu 0 312 6 550 308 125 76 chr20 3065429 3066000 -69087882 + L2 LINE L2 2654 3251 -21 215 204 45 0 chr20 3065966 3066010 -69087872 + MIR SINE MIR 214 259 -3 * 337 351 32 5 chr20 3066054 3066239 -69087643 - L1MEc LINE L1 -2235 4191 4002 344 305 17 17 chr20 3066291 3066468 -69087414 - L1MEc LINE L1 -3835 2591 2415 490 193 274 0 chr20 3066495 3066630 -69087252 + MLT2D LTR ERVL 189 360 -54 29 0 0 0 chr20 3066635 3066664 -69087218 + AT_rich Low_complexity Low_complexity 1 29 0 1063 119 134 20 chr20 3066719 3066920 -69086962 - MER44D DNA MER2_type 0 605 327 606 149 0 91 chr20 3067032 3067153 -69086729 + Tigger7 DNA MER2_type 2378 2487 0 27 92 0 0 chr20 3067153 3067229 -69086653 + AT_rich Low_complexity Low_complexity 1 76 0 1243 222 52 10 chr20 3067246 3067534 -69086348 - MLT2D LTR ERVL -114 300 1 1194 208 12 8 chr20 3067534 3067775 -69086107 - ERVL-D LTR ERVL -7 5757 5516 1342 255 85 51 chr20 3067817 3067950 -69085932 - MLT1H LTR MaLR -1 548 421 2244 119 0 3 chr20 3067950 3068252 -69085630 - AluSx SINE Alu -11 301 1 1342 255 85 51 chr20 3068252 3068648 -69085234 - MLT1H LTR MaLR -128 421 1 633 266 50 54 chr20 3068654 3069105 -69084777 - L1MEc LINE L1 -4928 1648 1114 270 0 0 0 chr20 3069493 3069523 -69084359 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr20 3069534 3069554 -69084328 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1971 151 0 0 chr20 3069557 3069841 -69084041 + AluSx SINE Alu 1 284 -28 185 197 16 0 chr20 3069841 3069902 -69083980 + (TA)n Simple_repeat Simple_repeat 1 62 0 2521 75 0 0 chr20 3070478 3070786 -69083096 + AluSg SINE Alu 1 308 -2 2465 71 0 3 chr20 3072582 3072891 -69080991 + AluY SINE Alu 3 310 -1 206 121 0 0 chr20 3073213 3073246 -69080636 + (T)n Simple_repeat Simple_repeat 1 33 0 818 136 24 16 chr20 3073377 3073502 -69080380 - FLAM_C SINE Alu -17 126 1 839 276 120 27 chr20 3073504 3074267 -69079615 - L1 LINE L1 -1983 4163 3277 2462 53 0 17 chr20 3074267 3074567 -69079315 + AluY SINE Alu 1 295 -16 839 276 120 27 chr20 3074567 3074605 -69079277 - L1 LINE L1 -2869 3277 3244 633 269 19 54 chr20 3074712 3074972 -69078910 - L1ME1 LINE L1 -15 6151 5901 2267 93 3 7 chr20 3074999 3075309 -69078573 - AluY SINE Alu -1 310 2 1830 221 93 14 chr20 3075326 3075769 -69078113 + MER74A LTR ERVL 77 554 -4 2068 93 68 0 chr20 3075769 3076049 -69077833 + AluSc SINE Alu 1 299 -10 1352 211 34 10 chr20 3076049 3076453 -69077429 - L1ME1 LINE L1 -583 5583 5170 4399 130 24 42 chr20 3076454 3077153 -69076729 - L1MB3 LINE L1 -7 6176 5489 2265 113 3 0 chr20 3077153 3077463 -69076419 - AluY SINE Alu 0 311 1 4399 130 24 42 chr20 3077463 3077508 -69076374 - L1MB3 LINE L1 -694 5489 5445 1846 147 51 0 chr20 3077509 3077801 -69076081 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 3077804 3077824 -69076058 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1702 138 33 53 chr20 3077829 3077988 -69075894 - AluJo SINE Alu -14 298 146 2389 76 13 3 chr20 3077988 3078289 -69075593 - AluSq SINE Alu -9 304 1 1702 138 33 53 chr20 3078289 3078433 -69075449 - AluJo SINE Alu -166 146 1 2274 227 52 5 chr20 3078433 3079053 -69074829 - L1MB3 LINE L1 -814 5332 4684 193 345 171 29 chr20 3079848 3080329 -69073553 + L2 LINE L2 2342 2890 -424 326 173 0 0 chr20 3080512 3080608 -69073274 + AluJ/FRAM SINE Alu 232 327 0 1271 244 128 28 chr20 3080611 3080914 -69072968 - L1MC/D LINE L1 -2029 5779 5419 2433 70 0 0 chr20 3080914 3081212 -69072670 + AluY SINE Alu 1 298 -13 1271 244 128 28 chr20 3081212 3081338 -69072544 - L1MC/D LINE L1 -2389 5419 5307 218 289 70 23 chr20 3081348 3081476 -69072406 - L2 LINE L2 -1476 1838 1705 652 320 114 47 chr20 3081615 3082386 -69071496 - L2 LINE L2 -1856 1458 636 2236 82 6 79 chr20 3082449 3082779 -69071103 + AluSx SINE Alu 1 306 -6 4885 180 66 29 chr20 3083510 3083581 -69070301 - L1MC1 LINE L1 -2 6331 6264 2064 150 0 0 chr20 3083581 3083881 -69070001 + AluSg SINE Alu 1 300 -10 4885 180 66 29 chr20 3083881 3084160 -69069722 - L1MC1 LINE L1 -69 6264 5997 2464 55 7 0 chr20 3084160 3084453 -69069429 - AluY SINE Alu -12 299 5 1717 186 7 7 chr20 3084457 3084747 -69069135 - AluJo SINE Alu -22 290 1 4885 180 66 29 chr20 3084747 3086136 -69067746 - L1MC1 LINE L1 -338 5995 4518 237 282 107 23 chr20 3086272 3086403 -69067479 - L1MC/D LINE L1 -1096 5050 4909 248 345 12 12 chr20 3086867 3086951 -69066931 + L2 LINE L2 3151 3234 -38 271 234 0 0 chr20 3087125 3087189 -69066693 - MER5B DNA MER1_type -18 160 97 2028 122 28 0 chr20 3087232 3087520 -69066362 + AluSx SINE Alu 3 298 -14 743 148 74 0 chr20 3087545 3087667 -69066215 + MER46A DNA MER2_type 1 131 -105 1674 184 3 14 chr20 3087667 3087960 -69065922 + AluJo SINE Alu 1 290 -22 309 258 72 0 chr20 3089771 3089868 -69064014 + MIR SINE MIR 94 197 -65 834 216 45 61 chr20 3090107 3090352 -69063530 + MIR SINE MIR 1 241 -21 1823 264 169 22 chr20 3091285 3091489 -69062393 - HAL1 LINE L1 -271 2236 2063 2062 139 0 0 chr20 3091489 3091777 -69062105 + AluJb SINE Alu 1 288 -24 1823 264 169 22 chr20 3091777 3092522 -69061360 - HAL1 LINE L1 -444 2063 1147 1634 181 10 14 chr20 3092542 3092834 -69061048 + AluJo SINE Alu 1 291 -21 1775 151 20 37 chr20 3092836 3093135 -69060747 + AluSx SINE Alu 1 294 -18 2072 116 10 0 chr20 3093163 3093455 -69060427 - AluSg SINE Alu -15 295 1 826 69 0 0 chr20 3093483 3093585 -69060297 + AluY SINE Alu 1 102 -209 2266 70 0 14 chr20 3093595 3093906 -69059976 + AluY SINE Alu 1 307 0 937 289 152 38 chr20 3094047 3094716 -69059166 - L1MC/D LINE L1 -743 5403 4812 180 0 0 0 chr20 3094716 3094736 -69059146 + (TG)n Simple_repeat Simple_repeat 2 21 0 937 289 152 38 chr20 3094736 3095740 -69058142 - L1MC/D LINE L1 -1334 4812 3850 1899 89 44 4 chr20 3095745 3096039 -69057843 - AluSg SINE Alu 0 305 1 1366 197 16 4 chr20 3096152 3096401 -69057481 - AluJo SINE Alu -48 264 13 1887 152 0 10 chr20 3096634 3096930 -69056952 - AluJb SINE Alu -19 293 1 436 293 146 40 chr20 3096930 3097333 -69056549 - L1MC/D LINE L1 -2751 3395 2950 800 267 105 83 chr20 3097346 3097802 -69056080 - MLT1J LTR MaLR -21 429 1 2294 89 3 19 chr20 3097848 3098164 -69055718 - AluY SINE Alu 0 311 1 877 211 6 6 chr20 3098174 3098335 -69055547 - AluSg/x SINE Alu -25 285 125 1922 93 4 16 chr20 3098340 3098598 -69055284 - AluSx SINE Alu -15 297 43 2377 73 0 51 chr20 3100906 3101219 -69052663 + AluSg SINE Alu 1 297 -13 1747 151 4 0 chr20 3101307 3101566 -69052316 + AluJb SINE Alu 34 293 -19 194 136 23 0 chr20 3101685 3101729 -69052153 + (TA)n Simple_repeat Simple_repeat 1 45 0 921 211 51 0 chr20 3102622 3102797 -69051085 - MER58A DNA MER1_type -39 185 2 270 310 164 41 chr20 3102897 3103068 -69050814 - MIR SINE MIR -50 212 21 446 267 58 58 chr20 3103219 3103432 -69050450 - L1MEd LINE L1 -1218 1272 963 1660 124 0 87 chr20 3103432 3103754 -69050128 - AluJo SINE Alu -18 294 1 2134 110 3 0 chr20 3103802 3104122 -69049760 - AluSp SINE Alu 0 313 1 1731 132 64 0 chr20 3104196 3104477 -69049405 + AluSx SINE Alu 1 299 -13 669 160 15 61 chr20 3104486 3104617 -69049265 + FLAM_C SINE Alu 9 133 -10 529 273 49 23 chr20 3104991 3105255 -69048627 + L1MC5 LINE L1 7513 7783 -178 969 228 39 0 chr20 3105277 3105483 -69048399 + MER20 DNA MER1_type 1 214 -5 2030 92 7 0 chr20 3105989 3106270 -69047612 - AluSg SINE Alu 0 310 28 433 272 67 56 chr20 3106386 3106566 -69047316 - L2 LINE L2 -18 3295 3114 2244 97 0 10 chr20 3106609 3106908 -69046974 - AluSg SINE Alu -14 296 1 246 284 265 0 chr20 3106920 3107022 -69046860 - MIR SINE MIR -17 245 117 1482 298 155 34 chr20 3107029 3108013 -69045869 - L2 LINE L2 -200 3072 1977 998 266 63 39 chr20 3108067 3108480 -69045402 + L2 LINE L2 1656 2078 -1236 942 284 135 31 chr20 3108487 3109044 -69044838 + L2 LINE L2 2697 3310 -3 515 296 45 38 chr20 3109040 3109304 -69044578 - L2 LINE L2 -1345 1969 1704 * 545 151 35 0 chr20 3109703 3109789 -69044093 - AluJ/FLAM SINE Alu -223 89 1 1498 185 11 0 chr20 3109795 3110113 -69043769 - AluJb SINE Alu 0 325 5 454 257 136 7 chr20 3110305 3110445 -69043437 - L2 LINE L2 -14 3299 3142 474 333 26 19 chr20 3112616 3112772 -69041110 - L2 LINE L2 -1 3271 3115 2181 88 0 0 chr20 3113069 3113352 -69040530 + AluSc SINE Alu 7 289 -20 209 361 52 0 chr20 3113354 3113451 -69040431 - L2 LINE L2 -228 3044 2943 239 368 39 45 chr20 3113621 3113646 -69040236 - L2 LINE L2 -601 2713 2689 2237 88 0 0 chr20 3113646 3113942 -69039940 + AluY SINE Alu 1 296 -15 239 368 39 45 chr20 3113942 3114071 -69039811 - L2 LINE L2 -625 2689 2560 378 252 160 28 chr20 3114094 3114342 -69039540 - MLT1L LTR MaLR -107 508 126 1547 174 3 46 chr20 3114346 3114650 -69039232 + AluJb SINE Alu 1 291 -21 270 273 153 40 chr20 3114762 3114912 -69038970 - L2 LINE L2 -566 2748 2582 2112 100 0 35 chr20 3114983 3115294 -69038588 + AluSq SINE Alu 2 301 -12 315 206 279 29 chr20 3115622 3115758 -69038124 - MER70-int LTR ERVL -1517 4137 3968 406 251 21 112 chr20 3116059 3116150 -69037732 - MER70-int LTR ERVL -2183 3471 3404 2230 99 0 0 chr20 3116150 3116452 -69037430 + AluSq SINE Alu 6 307 -6 406 251 21 112 chr20 3116452 3116547 -69037335 - MER70-int LTR ERVL -2250 3404 3302 1501 169 37 4 chr20 3116721 3116994 -69036888 + AluJo SINE Alu 1 282 -30 264 254 48 0 chr20 3117074 3117137 -69036745 - MER70-int LTR ERVL -3260 1763 1698 252 122 0 0 chr20 3117822 3117863 -69036019 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 668 312 59 30 chr20 3117888 3118225 -69035657 - MER70-int LTR ERVL -3574 2080 1734 2238 98 0 0 chr20 3118758 3119055 -69034827 + AluSx SINE Alu 1 297 -15 814 142 0 0 chr20 3119208 3119328 -69034554 - FLAM_C SINE Alu -23 120 1 253 219 29 109 chr20 3120011 3120148 -69033734 - LTR67 LTR ERVL -3 554 429 498 254 202 21 chr20 3120490 3121045 -69032837 + L1MC4a LINE L1 5213 5399 -747 257 295 129 20 chr20 3121285 3121512 -69032370 + L3 LINE CR1 966 1269 -308 1335 132 26 161 chr20 3121759 3122107 -69031775 + AluJo SINE Alu 1 301 -1 278 311 146 0 chr20 3122531 3122634 -69031248 + L3 LINE CR1 1388 1505 -72 330 183 44 29 chr20 3122778 3122915 -69030967 + (TATAA)n Simple_repeat Simple_repeat 5 143 0 2484 260 121 17 chr20 3122935 3123914 -69029968 + L1ME2 LINE L1 4283 5484 -680 1978 113 0 14 chr20 3123914 3124206 -69029676 + AluSg SINE Alu 1 288 -22 2484 260 121 17 chr20 3124206 3124697 -69029185 + L1ME2 LINE L1 5484 5922 -242 21 82 0 0 chr20 3124876 3124925 -69028957 + AT_rich Low_complexity Low_complexity 1 49 0 1377 108 5 27 chr20 3125847 3126070 -69027812 + AluJo SINE Alu 85 302 -10 2226 95 3 3 chr20 3126233 3126537 -69027345 - AluSp SINE Alu -9 304 1 555 293 163 49 chr20 3126600 3127204 -69026678 + L2 LINE L2 2636 3313 0 327 307 78 42 chr20 3127219 3127411 -69026471 - L1ME LINE L1 -353 5768 5570 1555 168 32 36 chr20 3127447 3127756 -69026126 - AluJo SINE Alu -4 308 1 267 228 14 44 chr20 3127889 3127926 -69025956 - MIR SINE MIR -66 142 143 2232 99 0 0 chr20 3127926 3128228 -69025654 - AluSx SINE Alu -10 302 1 267 228 14 44 chr20 3128228 3128290 -69025592 - MIR SINE MIR -64 144 82 1744 161 3 10 chr20 3129186 3129491 -69024391 + AluJo SINE Alu 10 312 0 717 186 23 0 chr20 3129938 3130067 -69023815 - FLAM_C SINE Alu -10 133 2 1287 198 72 0 chr20 3130103 3130381 -69023501 - AluJo SINE Alu -6 306 9 309 246 64 9 chr20 3130412 3130522 -69023360 + Charlie7 DNA MER1_type 2496 2611 -1 1842 121 37 14 chr20 3130543 3130840 -69023042 - AluSx SINE Alu -8 304 1 213 189 0 0 chr20 3130879 3130916 -69022966 + (TG)n Simple_repeat Simple_repeat 2 38 0 391 187 81 80 chr20 3130955 3131164 -69022718 - L1MC4a LINE L1 -312 5809 5669 288 111 0 0 chr20 3131705 3131750 -69022132 + (TG)n Simple_repeat Simple_repeat 2 46 0 2672 108 52 70 chr20 3132081 3132522 -69021360 + L1MB3 LINE L1 5694 6126 -57 1902 77 19 71 chr20 3132522 3132832 -69021050 + AluSx SINE Alu 1 294 -18 2672 108 52 70 chr20 3132832 3132889 -69020993 + L1MB3 LINE L1 6126 6183 0 990 286 95 40 chr20 3133701 3133764 -69020118 - MLT1L LTR MaLR -4 611 553 1828 149 7 3 chr20 3133764 3134060 -69019822 - AluSx SINE Alu -15 297 1 990 286 95 40 chr20 3134060 3134257 -69019625 - MLT1L LTR MaLR -62 553 368 2578 45 0 0 chr20 3134257 3134568 -69019314 + AluY SINE Alu 1 311 0 990 286 95 40 chr20 3134568 3134884 -69018998 - MLT1L LTR MaLR -247 368 2 316 250 0 25 chr20 3135214 3135294 -69018588 - L2 LINE L2 -1 3271 3194 209 346 39 0 chr20 3135424 3135528 -69018354 - L2 LINE L2 -251 3021 2914 428 255 46 72 chr20 3135603 3135756 -69018126 - LTR67 LTR ERVL 0 557 409 392 300 61 33 chr20 3135798 3135978 -69017904 - LTR67 LTR ERVL -259 298 114 510 198 9 9 chr20 3136714 3136830 -69017052 - L1MB8 LINE L1 -15 6163 6048 614 185 62 19 chr20 3136830 3136992 -69016890 - L1MB8 LINE L1 -5 6173 6005 2122 89 24 0 chr20 3137330 3137621 -69016261 - AluSp SINE Alu -15 298 1 2038 112 0 20 chr20 3138266 3138569 -69015313 + AluSx SINE Alu 1 297 -15 1979 118 13 22 chr20 3139201 3139516 -69014366 - AluSx SINE Alu 0 312 1 1830 142 28 0 chr20 3140376 3140658 -69013224 + AluSx SINE Alu 1 290 -22 1149 243 165 27 chr20 3140749 3141300 -69012582 - HAL1 LINE L1 -221 2286 1660 271 0 25 25 chr20 3142111 3142151 -69011731 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6318 62 21 26 chr20 3142151 3144018 -69009864 - SVA Other Other -520 1369 13 2109 63 45 11 chr20 3144021 3144308 -69009574 - AluY SINE Alu -14 297 1 282 284 63 63 chr20 3145741 3145868 -69008014 + MIR3 SINE MIR 3 129 -79 4202 171 50 37 chr20 3146850 3147806 -69006076 + LTR5 LTR ERVK 1 969 0 986 215 25 10 chr20 3148801 3149001 -69004881 - MER58A DNA MER1_type -15 209 7 2265 97 0 0 chr20 3149083 3149382 -69004500 + AluSg SINE Alu 1 299 -11 2178 107 3 0 chr20 3149499 3149797 -69004085 + AluSx SINE Alu 2 300 -12 351 176 51 95 chr20 3149803 3149847 -69004035 - MER5A DNA MER1_type -80 109 65 2004 117 30 0 chr20 3149847 3150147 -69003735 - AluSq SINE Alu -4 309 1 351 176 51 95 chr20 3150147 3150214 -69003668 - MER5A DNA MER1_type -124 65 4 332 316 33 61 chr20 3152326 3152538 -69001344 - L3 LINE CR1 -10 1567 1362 201 303 248 41 chr20 3152549 3152839 -69001043 - L2 LINE L2 -416 2898 2549 356 263 157 67 chr20 3152860 3153027 -69000855 - L3 LINE CR1 -611 966 815 2019 133 3 13 chr20 3153027 3153046 -69000836 - AluJb SINE Alu -14 298 280 217 0 0 0 chr20 3153046 3153070 -69000812 + (TTTG)n Simple_repeat Simple_repeat 1 176 0 2019 133 3 13 chr20 3153070 3153350 -69000532 - AluJb SINE Alu -32 280 2 356 263 157 67 chr20 3153350 3153451 -69000431 - L3 LINE CR1 -762 815 666 2022 116 46 0 chr20 3153451 3153736 -69000146 - AluSx SINE Alu -12 300 3 356 263 157 67 chr20 3153736 3153766 -69000116 - L3 LINE CR1 -911 666 640 2230 129 20 0 chr20 3154587 3154890 -68998992 - AluSx SINE Alu -3 309 1 2148 295 171 47 chr20 3155326 3156396 -68997486 + L2 LINE L2 605 1542 -1772 2374 98 0 0 chr20 3156396 3156691 -68997191 + AluSc SINE Alu 1 295 -14 2148 295 171 47 chr20 3156691 3157524 -68996358 + L2 LINE L2 1542 2743 -571 2497 70 7 0 chr20 3157530 3157831 -68996051 + AluSp SINE Alu 1 303 -10 2192 122 7 7 chr20 3157900 3158196 -68995686 + AluSx SINE Alu 4 299 -13 408 198 79 0 chr20 3158822 3158923 -68994959 - L2 LINE L2 -4 3268 3160 193 196 87 0 chr20 3160540 3160586 -68993296 + L2 LINE L2 3219 3268 -4 184 321 99 30 chr20 3163656 3163787 -68990095 - L2 LINE L2 -228 3044 2905 2106 125 7 3 chr20 3164799 3165095 -68988787 + AluJb SINE Alu 1 297 -15 2392 92 13 0 chr20 3165097 3165403 -68988479 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3165403 3165424 -68988458 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 3170436 3170476 -68983406 + GC_rich Low_complexity Low_complexity 1 40 0 2008 78 52 0 chr20 3171029 3171325 -68982557 + AluSx SINE Alu 1 310 0 772 221 121 5 chr20 3172084 3172283 -68981599 + MER58A DNA MER1_type 2 223 -1 2575 66 3 0 chr20 3172923 3173227 -68980655 - AluY SINE Alu -6 305 1 349 273 76 0 chr20 3174526 3174658 -68979224 - HERVL LTR ERVL -2987 2667 2526 1752 97 112 4 chr20 3175210 3175477 -68978405 + AluSx SINE Alu 1 296 -16 2254 104 3 0 chr20 3175902 3176191 -68977691 + AluSx SINE Alu 1 290 -22 1781 115 87 52 chr20 3176201 3176487 -68977395 + AluSx SINE Alu 1 296 -16 1893 166 6 29 chr20 3176625 3176939 -68976943 + AluJb SINE Alu 1 307 -5 678 235 18 54 chr20 3177255 3177476 -68976406 + MIR SINE MIR 40 252 -10 2234 79 32 7 chr20 3177481 3177792 -68976090 - AluSp SINE Alu 0 318 1 213 39 0 0 chr20 3177795 3177821 -68976061 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2478 68 3 0 chr20 3178022 3178317 -68975565 - AluSp SINE Alu -15 298 3 2441 93 0 6 chr20 3178350 3178662 -68975220 + AluSx SINE Alu 1 310 -2 328 279 18 0 chr20 3178662 3178773 -68975109 - L1MC4 LINE L1 -164 7878 7766 839 129 0 43 chr20 3178834 3178973 -68974909 - FLAM_C SINE Alu 0 133 1 1819 145 29 17 chr20 3178973 3179311 -68974571 - L1MB2 LINE L1 -346 7244 6902 1977 115 7 46 chr20 3179311 3179615 -68974267 - AluSx SINE Alu -3 309 18 248 122 41 41 chr20 3179699 3179748 -68974134 - L1MB2 LINE L1 -3400 4165 4117 2421 99 0 0 chr20 3179789 3180102 -68973780 - AluSp SINE Alu 0 313 1 405 290 21 11 chr20 3180103 3180289 -68973593 - L1MB2 LINE L1 -4345 3220 3033 916 184 72 28 chr20 3180301 3180366 -68973516 - L1MB2 LINE L1 -4903 2662 2601 1567 180 6 54 chr20 3180366 3180683 -68973199 - AluJo SINE Alu -5 307 6 916 184 72 28 chr20 3180683 3180867 -68973015 - L1MB2 LINE L1 -4964 2601 2402 925 143 0 0 chr20 3180868 3181001 -68972881 + AluSq/x SINE Alu 1 133 -180 1995 137 7 23 chr20 3181005 3181143 -68972739 + AluSq SINE Alu 1 140 -173 2908 3 0 3 chr20 3181143 3181451 -68972431 + AluYa5 SINE Alu 5 311 0 1995 137 7 23 chr20 3181451 3181619 -68972263 + AluSq SINE Alu 140 302 -11 2271 119 3 3 chr20 3181798 3182109 -68971773 - AluJb SINE Alu 0 312 2 454 344 69 20 chr20 3182128 3182426 -68971456 + ERVL LTR ERVL 2908 3253 -1927 2279 102 3 0 chr20 3182480 3182774 -68971108 - AluSx SINE Alu -2 310 16 2203 104 14 0 chr20 3182785 3183087 -68970795 - AluSq SINE Alu 0 306 1 275 75 0 57 chr20 3183088 3183141 -68970741 + L1MA9 LINE L1 6263 6312 0 1426 261 80 56 chr20 3183254 3183864 -68970018 + L1 LINE L1 1110 1734 -5475 402 223 10 0 chr20 3183895 3183998 -68969884 + L1 LINE L1 3264 3367 -3841 1614 94 163 12 chr20 3184053 3184321 -68969561 - AluSg1 SINE Alu 0 305 1 3013 159 31 64 chr20 3184388 3185155 -68968727 + L1 LINE L1 4068 4809 -2399 513 238 0 0 chr20 3185155 3185256 -68968626 - Tigger2 DNA MER2_type -10 2708 2608 4558 158 32 23 chr20 3185259 3185315 -68968567 + L1 LINE L1 5498 5552 -1656 2492 65 3 10 chr20 3185315 3185621 -68968261 + AluSg SINE Alu 3 306 -4 4558 158 32 23 chr20 3185621 3186246 -68967636 + L1 LINE L1 5552 6169 -1039 189 0 0 0 chr20 3186246 3186267 -68967615 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4558 158 32 23 chr20 3186267 3186462 -68967420 + L1 LINE L1 6169 6387 -821 2509 73 7 3 chr20 3186462 3186765 -68967117 + AluSg SINE Alu 1 304 -6 4558 158 32 23 chr20 3186765 3186808 -68967074 + L1 LINE L1 6387 6428 -780 661 147 0 0 chr20 3186809 3186911 -68966971 + FRAM SINE Alu 62 163 -13 2389 80 0 10 chr20 3186911 3187213 -68966669 + AluY SINE Alu 1 299 -12 4587 63 4 0 chr20 3187217 3187756 -68966126 + SVA Other Other 839 1379 -7 500 111 9 10 chr20 3187760 3187883 -68965999 + L1M1 LINE L1 5315 5440 -851 1887 144 14 7 chr20 3187883 3188175 -68965707 + AluSx SINE Alu 1 294 -18 1047 140 67 0 chr20 3188176 3188340 -68965542 + AluJb SINE Alu 133 307 -5 799 248 124 28 chr20 3188340 3188365 -68965517 + L1ME1 LINE L1 5804 5825 -341 4069 117 21 44 chr20 3188365 3189072 -68964810 - LTR8 LTR ERV1 0 691 1 799 248 124 28 chr20 3189072 3189368 -68964514 + L1ME1 LINE L1 5825 6156 -10 771 233 96 27 chr20 3189504 3189577 -68964305 + L2 LINE L2 2140 2207 -1107 2274 109 10 0 chr20 3189577 3189880 -68964002 + AluSp SINE Alu 1 306 -7 771 233 96 27 chr20 3189880 3190098 -68963784 + L2 LINE L2 2207 2451 -863 2269 114 0 3 chr20 3190098 3190406 -68963476 - AluSx SINE Alu -5 307 1 1020 151 13 0 chr20 3190414 3190566 -68963316 - AluSg/x SINE Alu -22 288 135 1057 221 223 7 chr20 3190567 3190757 -68963125 + L2 LINE L2 2439 2587 -727 2386 75 3 3 chr20 3190757 3191052 -68962830 - AluY SINE Alu -14 297 3 1057 221 223 7 chr20 3191052 3191287 -68962595 + L2 LINE L2 2587 2956 -358 237 217 0 22 chr20 3191298 3191344 -68962538 + MLT1E1 LTR MaLR 7 51 -573 1754 95 95 39 chr20 3191414 3191697 -68962185 - AluSx SINE Alu -13 299 1 287 161 0 0 chr20 3191698 3191754 -68962128 + Alu SINE Alu 243 298 -4 700 203 203 42 chr20 3191825 3192200 -68961682 + MLT1E1 LTR MaLR 123 562 -31 2016 153 0 10 chr20 3192200 3192508 -68961374 - AluJo SINE Alu -7 305 1 700 203 203 42 chr20 3192508 3192543 -68961339 + MLT1E1 LTR MaLR 562 590 -3 317 230 59 134 chr20 3192574 3192813 -68961069 + L2 LINE L2 3028 3248 -65 1164 249 143 5 chr20 3193310 3193687 -68960195 - LTR16A LTR ERVL -3 447 19 1578 96 5 36 chr20 3193796 3194016 -68959866 - AluSg/x SINE Alu -17 295 83 1099 232 51 40 chr20 3194041 3194092 -68959790 - Charlie4a DNA MER1_type -1534 427 378 2269 94 0 17 chr20 3194092 3194389 -68959493 + AluSx SINE Alu 1 292 -20 1099 232 51 40 chr20 3194389 3194428 -68959454 - Charlie4a DNA MER1_type -1583 378 341 2067 129 0 26 chr20 3194428 3194731 -68959151 - AluJo SINE Alu -17 295 1 1099 232 51 40 chr20 3194731 3195014 -68958868 - Charlie4a DNA MER1_type -1620 341 49 2758 107 76 127 chr20 3197158 3197200 -68956682 - MER4A LTR ERV1 -1 663 620 2217 125 0 0 chr20 3197200 3197495 -68956387 - AluSq SINE Alu -18 295 1 2758 107 76 127 chr20 3197495 3197527 -68956355 - MER4A LTR ERV1 -44 620 588 2078 134 3 7 chr20 3197527 3197832 -68956050 + AluSq SINE Alu 1 304 -9 2758 107 76 127 chr20 3197832 3197886 -68955996 - MER4A LTR ERV1 -76 588 533 2324 94 0 27 chr20 3197886 3198184 -68955698 - AluSg SINE Alu -20 290 1 2758 107 76 127 chr20 3198184 3198752 -68955130 - MER4A LTR ERV1 -131 533 1 509 257 42 0 chr20 3199056 3199200 -68954682 + L1ME3A LINE L1 5994 6143 -27 737 211 51 6 chr20 3199206 3199381 -68954501 - MER2 DNA MER2_type 0 345 163 1959 141 10 16 chr20 3199381 3199685 -68954197 - AluSx SINE Alu -10 302 1 1751 147 26 46 chr20 3200290 3200596 -68953286 + AluSx SINE Alu 1 300 -12 237 289 72 77 chr20 3200669 3200863 -68953019 - MLT1J2 LTR MaLR -4 446 254 1100 150 0 0 chr20 3200972 3201132 -68952750 + AluSp SINE Alu 137 296 -17 266 311 14 0 chr20 3201152 3201226 -68952656 - MLT1J2 LTR MaLR -309 141 67 2236 77 0 119 chr20 3201232 3201584 -68952298 - AluSx SINE Alu -1 311 2 1133 224 148 84 chr20 3201610 3202110 -68951772 + MLT1H LTR MaLR 1 532 -17 2433 84 0 6 chr20 3202692 3203003 -68950879 - AluY SINE Alu -2 309 1 335 326 158 9 chr20 3203098 3203319 -68950563 + L1MEc LINE L1 38 291 -6105 1804 219 60 9 chr20 3203370 3203922 -68949960 + L1M4 LINE L1 4216 4795 -1351 820 210 0 56 chr20 3203903 3204098 -68949784 + AluJo SINE Alu 117 300 -12 * 240 200 0 0 chr20 3204098 3204143 -68949739 + L1M4 LINE L1 4800 4844 -1302 1361 127 104 0 chr20 3204143 3204363 -68949519 - AluSx SINE Alu -69 243 1 32 0 0 0 chr20 3204412 3204444 -68949438 + AT_rich Low_complexity Low_complexity 1 32 0 283 324 6 40 chr20 3205317 3205490 -68948392 + G-rich Low_complexity Low_complexity 3 169 0 233 243 66 22 chr20 3206058 3206194 -68947688 + (TCTCTG)n Simple_repeat Simple_repeat 2 143 0 22 56 0 0 chr20 3206849 3206885 -68946997 + GC_rich Low_complexity Low_complexity 1 36 0 257 111 0 0 chr20 3207784 3207820 -68946062 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 489 321 21 26 chr20 3209978 3210171 -68943711 + MIR SINE MIR 24 215 -47 484 194 194 0 chr20 3210171 3210269 -68943613 + AluJo/FLAM SINE Alu 2 118 -184 2312 90 0 3 chr20 3210269 3210570 -68943312 - AluSx SINE Alu -12 300 1 28 35 0 35 chr20 3210577 3210602 -68943280 + AT_rich Low_complexity Low_complexity 1 25 -30 2004 114 7 7 chr20 3210602 3210891 -68942991 - AluSg SINE Alu -21 289 1 28 35 0 35 chr20 3210891 3210922 -68942960 + AT_rich Low_complexity Low_complexity 25 55 0 1651 155 54 0 chr20 3210934 3211211 -68942671 + AluJb SINE Alu 1 292 -20 2356 56 0 30 chr20 3211237 3211541 -68942341 + AluY SINE Alu 1 295 -16 2280 101 0 0 chr20 3211595 3211901 -68941981 - AluSq SINE Alu -7 306 1 187 355 91 21 chr20 3212298 3212484 -68941398 + L2 LINE L2 1175 1373 -1941 399 300 108 31 chr20 3212498 3212721 -68941161 - HAL1 LINE L1 -245 2262 2023 297 0 0 0 chr20 3212735 3212768 -68941114 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1539 271 72 35 chr20 3212811 3212914 -68940968 + L2 LINE L2 1824 1922 -1392 2414 74 0 6 chr20 3212914 3213226 -68940656 + AluSg SINE Alu 1 310 0 1539 271 72 35 chr20 3213226 3213295 -68940587 + L2 LINE L2 1922 1987 -1327 2487 53 0 0 chr20 3213295 3213598 -68940284 - AluY SINE Alu -8 303 1 1539 271 72 35 chr20 3213598 3214062 -68939820 + L2 LINE L2 1987 2485 -829 383 320 138 52 chr20 3214101 3214463 -68939419 + L2 LINE L2 2920 3312 -1 214 250 33 0 chr20 3214465 3214525 -68939357 + MIR SINE MIR 43 104 -104 892 149 0 8 chr20 3214849 3215023 -68938859 - FLAM_C SINE Alu 0 173 1 1880 135 36 7 chr20 3215059 3215362 -68938520 - AluJb SINE Alu 0 312 1 1714 92 0 0 chr20 3215424 3215652 -68938230 - AluSq SINE Alu -80 233 6 2245 75 0 14 chr20 3215956 3216249 -68937633 + AluSg SINE Alu 1 289 -21 2454 62 0 0 chr20 3217532 3217837 -68936045 + AluSq SINE Alu 1 305 -8 806 204 63 45 chr20 3217841 3218062 -68935820 - MIR SINE MIR -30 232 8 1644 143 6 117 chr20 3218081 3218439 -68935443 + 7SLRNA srpRNA srpRNA 1 318 -2 858 215 0 0 chr20 3218441 3218604 -68935278 + AluJo/FRAM SINE Alu 140 302 0 223 304 24 56 chr20 3219079 3219204 -68934678 - MIR SINE MIR -64 144 24 193 244 171 0 chr20 3219301 3219424 -68934458 + L2 LINE L2 2715 2858 -456 2018 136 3 3 chr20 3219512 3219813 -68934069 - AluSx SINE Alu -11 301 1 1809 151 3 10 chr20 3219907 3220205 -68933677 - AluSx SINE Alu -1 311 16 1610 173 21 21 chr20 3220211 3220500 -68933382 - AluJo SINE Alu -22 290 2 861 142 122 146 chr20 3220613 3220756 -68933126 - AluJo SINE Alu -6 306 161 2168 82 27 0 chr20 3220756 3221048 -68932834 - AluSp SINE Alu -13 300 1 2151 85 44 0 chr20 3221056 3221350 -68932532 - AluSg SINE Alu -3 307 1 2346 73 0 7 chr20 3221359 3221659 -68932223 - AluY SINE Alu -13 298 1 861 142 122 146 chr20 3221659 3221743 -68932139 - AluJo SINE Alu -166 146 66 2029 147 0 0 chr20 3221931 3222238 -68931644 + AluSx SINE Alu 2 308 -4 408 293 78 29 chr20 3222393 3222598 -68931284 - ERVL LTR ERVL -3157 2607 2393 1665 147 43 14 chr20 3222686 3222809 -68931073 + AluSq SINE Alu 14 132 -181 1947 123 45 0 chr20 3222809 3223101 -68930781 + AluY SINE Alu 1 305 -6 1665 147 43 14 chr20 3223101 3223256 -68930626 + AluSq SINE Alu 132 300 -13 2167 118 3 0 chr20 3223290 3223595 -68930287 - AluSx SINE Alu -6 306 1 962 159 0 25 chr20 3223595 3223758 -68930124 - AluJb SINE Alu -12 300 142 2074 91 0 14 chr20 3223765 3224051 -68929831 - AluSp SINE Alu -14 299 18 331 332 61 37 chr20 3224062 3224276 -68929606 - LTR16A1 LTR ERVL -235 222 4 1574 150 117 0 chr20 3224511 3224777 -68929105 - AluJo SINE Alu -15 297 1 1280 262 138 27 chr20 3225174 3225458 -68928424 - MLT1G LTR MaLR 0 590 339 2008 99 58 0 chr20 3225458 3225750 -68928132 - AluSq SINE Alu -4 309 1 1280 262 138 27 chr20 3225750 3225988 -68927894 - MLT1G LTR MaLR -251 339 10 216 250 73 0 chr20 3227386 3227454 -68926428 + MIR SINE MIR 177 249 -13 1108 246 62 0 chr20 3227695 3228004 -68925878 - L1MC/D LINE L1 -2153 5655 5328 237 119 0 0 chr20 3228112 3228154 -68925728 - AluJb SINE Alu -5 297 256 713 58 11 0 chr20 3228154 3228241 -68925641 - AluSq/x SINE Alu -193 119 32 1640 151 0 0 chr20 3228241 3228493 -68925389 - AluJb SINE Alu -60 252 1 2156 100 3 0 chr20 3228566 3228866 -68925016 - AluSx SINE Alu -11 301 1 248 308 105 15 chr20 3228961 3229094 -68924788 - L1MC/D LINE L1 -1217 4929 4785 2126 88 13 29 chr20 3229178 3229485 -68924397 - AluSq SINE Alu -11 302 1 424 181 0 0 chr20 3230021 3230093 -68923789 + MER3 DNA MER1_type 1 72 -137 538 184 18 0 chr20 3230100 3230214 -68923668 + Ricksha DNA DNA 8 123 -3123 354 155 0 48 chr20 3230198 3230282 -68923600 - Ricksha DNA DNA -1463 1783 1704 * 686 120 0 26 chr20 3230261 3230378 -68923504 - Ricksha DNA DNA -3131 115 2 653 193 89 0 chr20 3230378 3230513 -68923369 + MER3 DNA MER1_type 63 209 0 2227 101 0 0 chr20 3232022 3232318 -68921564 - AluSx SINE Alu -16 296 1 218 232 0 36 chr20 3232499 3232555 -68921327 + L3 LINE CR1 441 494 -1083 1838 144 45 0 chr20 3232574 3232865 -68921017 + AluJo SINE Alu 1 304 -8 919 114 0 0 chr20 3234636 3234767 -68919115 + FLAM_C SINE Alu 11 141 -2 239 327 215 5 chr20 3235271 3235795 -68918087 + L2 LINE L2 2624 3267 -5 243 217 0 0 chr20 3236034 3236094 -68917788 + GA-rich Low_complexity Low_complexity 1 60 0 2116 96 0 39 chr20 3236582 3236894 -68916988 + AluSx SINE Alu 1 300 -12 1958 110 0 73 chr20 3236902 3237230 -68916652 + AluSx SINE Alu 1 304 -8 249 349 146 29 chr20 3237249 3237764 -68916118 - L2 LINE L2 -470 2844 2208 2190 120 0 0 chr20 3237764 3238065 -68915817 + AluSq SINE Alu 3 303 -10 249 349 146 29 chr20 3238065 3238315 -68915567 - L2 LINE L2 -1106 2208 1989 2233 87 3 3 chr20 3238578 3238888 -68914994 + AluSg SINE Alu 1 310 0 2077 80 27 23 chr20 3239664 3239965 -68913917 - AluSc SINE Alu -7 302 1 2180 121 0 0 chr20 3240724 3241022 -68912860 + AluSx SINE Alu 1 298 -14 369 0 0 0 chr20 3241198 3241239 -68912643 + (CA)n Simple_repeat Simple_repeat 1 41 0 1828 148 3 3 chr20 3241312 3241617 -68912265 + AluSx SINE Alu 1 305 -7 2294 97 0 0 chr20 3241620 3241929 -68911953 + AluSx SINE Alu 1 309 -3 823 178 74 18 chr20 3241929 3242092 -68911790 + AluSg/x SINE Alu 132 303 -7 1923 149 3 0 chr20 3242101 3242397 -68911485 + AluSx SINE Alu 1 297 -15 2366 66 0 7 chr20 3242399 3242700 -68911182 + AluY SINE Alu 1 299 -12 1022 184 0 0 chr20 3242700 3242874 -68911008 + AluSg/x SINE Alu 132 305 -5 1387 211 88 76 chr20 3243007 3243452 -68910430 + MLT1E LTR MaLR 117 592 -1 2084 117 3 3 chr20 3243482 3243780 -68910102 + AluSx SINE Alu 1 298 -14 2096 101 20 3 chr20 3243982 3244278 -68909604 + AluSc SINE Alu 1 301 -8 2231 94 7 0 chr20 3244278 3244574 -68909308 + AluY SINE Alu 1 299 -12 681 162 15 66 chr20 3246713 3246849 -68907033 + FLAM_A SINE Alu 1 129 -4 1588 155 23 58 chr20 3247816 3248125 -68905757 + AluJo SINE Alu 1 298 -14 6076 105 74 35 chr20 3248126 3250439 -68903443 + SVA Other Other 30 1386 0 433 209 0 18 chr20 3250443 3250613 -68903269 + GA-rich Low_complexity Low_complexity 1 166 0 2356 91 0 0 chr20 3250664 3250973 -68902909 + AluSq SINE Alu 1 309 -4 1302 229 85 21 chr20 3251227 3251691 -68902191 + MER20B DNA MER1_type 111 648 -135 1809 173 7 3 chr20 3252490 3252797 -68901085 + AluJo SINE Alu 1 308 -4 22 0 0 0 chr20 3253780 3253802 -68900080 + AT_rich Low_complexity Low_complexity 1 22 0 1679 151 47 25 chr20 3253859 3254137 -68899745 + AluJo SINE Alu 2 336 0 418 39 0 0 chr20 3254137 3254188 -68899694 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1037 201 6 0 chr20 3254245 3254419 -68899463 - FAM SINE Alu 0 175 1 909 296 132 46 chr20 3254543 3254860 -68899022 - L1M4 LINE L1 -1751 4395 4107 2295 111 3 0 chr20 3254860 3255157 -68898725 + AluSg SINE Alu 1 298 -12 909 296 132 46 chr20 3255157 3255444 -68898438 - L1M4 LINE L1 -2039 4107 3739 190 278 167 0 chr20 3255463 3255517 -68898365 - L2 LINE L2 -17 3255 3193 644 93 70 195 chr20 3255525 3255637 -68898245 + L1MC2 LINE L1 6036 6160 -184 2336 99 3 0 chr20 3255637 3255940 -68897942 + AluSx SINE Alu 1 304 -8 2077 125 0 3 chr20 3255940 3256254 -68897628 + AluSx SINE Alu 3 312 0 644 93 70 195 chr20 3256254 3256355 -68897527 + L1MC2 LINE L1 6158 6223 -121 226 154 19 0 chr20 3256365 3256417 -68897465 + L1MC2 LINE L1 6282 6334 -10 2158 115 7 3 chr20 3256452 3256748 -68897134 + AluSx SINE Alu 6 302 -10 826 157 22 8 chr20 3256749 3256883 -68896999 + AluJo SINE Alu 1 136 -176 252 235 73 0 chr20 3257486 3257554 -68896328 - L1MC4 LINE L1 -41 8001 7929 1810 140 0 56 chr20 3257646 3257967 -68895915 - AluJb SINE Alu -9 303 1 567 276 104 37 chr20 3258018 3258286 -68895596 - L1ME4a LINE L1 -158 5963 5678 770 114 0 0 chr20 3258383 3258488 -68895394 + AluSg/x SINE Alu 198 302 -10 2371 76 3 20 chr20 3258488 3258790 -68895092 + AluSq SINE Alu 1 297 -16 24 0 0 0 chr20 3259048 3259072 -68894810 + AT_rich Low_complexity Low_complexity 1 24 0 671 195 98 102 chr20 3259467 3259723 -68894159 - MER112 DNA MER1_type -1 255 1 263 224 0 40 chr20 3259729 3259805 -68894077 + L1MD2 LINE L1 6180 6252 -107 481 111 0 0 chr20 3259805 3259868 -68894014 + AluS SINE Alu 1 63 -255 225 204 0 0 chr20 3260117 3260161 -68893721 + T-rich Low_complexity Low_complexity 1 44 0 2296 122 0 3 chr20 3260254 3260565 -68893317 - AluSx SINE Alu -2 310 1 2289 104 0 0 chr20 3260577 3260865 -68893017 - AluY SINE Alu -23 288 1 1980 143 11 0 chr20 3260869 3261155 -68892727 - AluSx SINE Alu -23 289 1 999 224 102 14 chr20 3261181 3261260 -68892622 - L1MD2 LINE L1 -8 6351 6280 1748 82 55 0 chr20 3261260 3261479 -68892403 - AluSq SINE Alu -82 231 1 999 224 102 14 chr20 3261479 3261694 -68892188 - L1MD2 LINE L1 -79 6280 6031 2140 120 7 13 chr20 3261901 3262201 -68891681 + AluSx SINE Alu 1 298 -14 442 267 99 0 chr20 3262499 3262600 -68891282 + MER81 DNA DNA 3 113 -1 2102 103 0 75 chr20 3263272 3263624 -68890258 - AluSq SINE Alu 0 313 1 2140 134 0 0 chr20 3263626 3263918 -68889964 - AluSg SINE Alu -18 292 1 2426 97 0 22 chr20 3263918 3264237 -68889645 - AluSx SINE Alu 0 312 1 1094 143 6 6 chr20 3264621 3264796 -68889086 - L1PA16 LINE L1 -1 6165 5991 2430 99 0 0 chr20 3264827 3265129 -68888753 - AluSx SINE Alu -10 302 1 241 178 22 144 chr20 3265245 3265279 -68888603 + L1M4 LINE L1 3959 3996 -2150 2286 101 13 7 chr20 3265279 3265585 -68888297 + AluSp SINE Alu 4 311 -2 241 178 22 144 chr20 3265585 3265640 -68888242 + L1M4 LINE L1 3996 4037 -2109 1732 166 7 7 chr20 3265641 3265918 -68887964 + AluJo SINE Alu 1 277 -35 240 35 0 0 chr20 3265918 3265947 -68887935 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 840 143 14 14 chr20 3265950 3266090 -68887792 + AluJb SINE Alu 165 304 -8 2166 105 0 23 chr20 3266100 3266229 -68887653 + AluSx SINE Alu 11 141 -171 2246 118 0 10 chr20 3266229 3266534 -68887348 + AluSx SINE Alu 1 302 -10 2166 105 0 23 chr20 3266534 3266708 -68887174 + AluSx SINE Alu 141 307 -5 2948 171 85 154 chr20 3266718 3267008 -68886874 + L1M4 LINE L1 4033 4341 -1805 2000 136 27 13 chr20 3267008 3267309 -68886573 - AluSx SINE Alu -4 308 4 2948 171 85 154 chr20 3267309 3267428 -68886454 + L1M4 LINE L1 4341 4467 -1679 2302 82 7 3 chr20 3267428 3267720 -68886162 + AluSg1 SINE Alu 5 297 -12 1168 153 6 0 chr20 3267720 3267897 -68885985 + AluJo/FRAM SINE Alu 134 311 -1 2948 171 85 154 chr20 3267897 3268609 -68885273 + L1M4 LINE L1 4465 5242 -904 1505 176 85 4 chr20 3269071 3269343 -68884539 - AluJb SINE Alu -18 294 1 1835 179 13 0 chr20 3269343 3269645 -68884237 - AluJb SINE Alu -5 307 2 2156 125 0 0 chr20 3269674 3269970 -68883912 + AluSx SINE Alu 1 296 -16 2284 110 3 25 chr20 3269970 3270289 -68883593 + AluSx SINE Alu 1 312 0 2223 113 0 7 chr20 3273645 3273945 -68879937 + AluSx SINE Alu 1 298 -14 1373 183 97 25 chr20 3274796 3274958 -68878924 - AluJb SINE Alu -13 299 150 285 51 0 0 chr20 3274958 3274997 -68878885 + (TG)n Simple_repeat Simple_repeat 1 39 0 1373 183 97 25 chr20 3274997 3275113 -68878769 - AluJb SINE Alu -162 150 1 929 246 42 0 chr20 3275159 3275374 -68878508 + MER58A DNA MER1_type 1 224 0 668 137 11 0 chr20 3275429 3275524 -68878358 + FLAM_C SINE Alu 13 108 -35 196 51 26 26 chr20 3275531 3275570 -68878312 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2290 107 13 7 chr20 3275733 3276043 -68877839 + AluSx SINE Alu 1 312 0 2067 98 0 73 chr20 3276109 3276424 -68877458 + AluSg SINE Alu 1 292 -18 2137 123 14 0 chr20 3276536 3276828 -68877054 + AluSx SINE Alu 1 296 -16 28 48 0 0 chr20 3277029 3277071 -68876811 + AT_rich Low_complexity Low_complexity 1 42 0 477 260 81 60 chr20 3277233 3277468 -68876414 - MIR SINE MIR -3 259 20 322 200 0 17 chr20 3277580 3277640 -68876242 + MIR3 SINE MIR 145 203 -5 1387 151 17 25 chr20 3277657 3277895 -68875987 - MER46A DNA MER2_type 0 236 1 758 236 149 65 chr20 3278022 3278310 -68875572 + HAL1 LINE L1 1745 2008 -499 1538 221 30 3 chr20 3278310 3278608 -68875274 + AluJb SINE Alu 1 306 -6 758 236 149 65 chr20 3278608 3278810 -68875072 + HAL1 LINE L1 2008 2276 -231 1211 144 0 0 chr20 3278812 3278993 -68874889 + AluSg/x SINE Alu 130 310 0 967 112 0 0 chr20 3279033 3279158 -68874724 + AluSq/x SINE Alu 12 136 -177 2165 112 3 3 chr20 3279158 3279452 -68874430 + AluSq SINE Alu 1 294 -19 319 235 0 0 chr20 3279482 3279550 -68874332 + HAL1 LINE L1 2440 2507 0 2194 116 7 10 chr20 3280084 3280387 -68873495 - AluSx SINE Alu -10 302 1 740 173 16 0 chr20 3280891 3281018 -68872864 + FLAM_C SINE Alu 1 129 -4 1509 104 5 205 chr20 3281806 3282181 -68871701 - AluJb SINE Alu -12 300 1 2319 60 0 3 chr20 3282363 3282684 -68871198 - AluY SINE Alu 0 320 1 451 252 0 9 chr20 3283210 3283317 -68870565 + MER5A DNA MER1_type 9 114 -75 323 296 42 49 chr20 3283371 3283513 -68870369 - MIR SINE MIR -78 184 44 2302 64 3 74 chr20 3283976 3284302 -68869580 + AluSx SINE Alu 3 305 -7 816 138 0 62 chr20 3284392 3284537 -68869345 - FLAM_C SINE Alu -7 136 1 1200 156 0 0 chr20 3284579 3284746 -68869136 - AluJb SINE Alu -16 296 130 1509 105 9 19 chr20 3284790 3285000 -68868882 + AluSg/x SINE Alu 72 279 -31 353 147 118 20 chr20 3285704 3285806 -68868076 + MLT1L LTR MaLR 168 279 -336 31 0 0 0 chr20 3286604 3286635 -68867247 + AT_rich Low_complexity Low_complexity 1 31 0 301 227 184 120 chr20 3289598 3289972 -68863910 + L1M2 LINE L1 654 1051 -5798 288 0 0 0 chr20 3291341 3291373 -68862509 + (CAGCT)n Simple_repeat Simple_repeat 3 34 0 239 322 20 26 chr20 3291761 3291913 -68861969 + MIR SINE MIR 24 174 -88 378 217 217 0 chr20 3293009 3293152 -68860730 - MER96 DNA MER1_type? -1 174 1 2120 136 3 7 chr20 3293507 3293815 -68860067 + AluSx SINE Alu 1 307 -5 2306 87 13 3 chr20 3294119 3294417 -68859465 + AluSx SINE Alu 2 302 -10 2149 126 0 10 chr20 3294423 3294732 -68859150 + AluSx SINE Alu 6 311 -1 1161 97 30 18 chr20 3295427 3295592 -68858290 + AluSg/x SINE Alu 135 301 -11 216 365 0 0 chr20 3296014 3296110 -68857772 + L2 LINE L2 2651 2746 -568 215 326 90 0 chr20 3296127 3296216 -68857666 + MIR SINE MIR 16 112 -96 25 65 0 0 chr20 3297440 3297486 -68856396 + GC_rich Low_complexity Low_complexity 1 46 0 326 249 216 25 chr20 3298868 3299109 -68854773 - HAL1b LINE L1 -626 722 436 2074 91 43 11 chr20 3299787 3300063 -68853819 - AluSg SINE Alu 0 310 26 189 0 0 0 chr20 3300108 3300129 -68853753 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 2039 121 17 3 chr20 3300174 3300464 -68853418 - AluSx SINE Alu -18 294 1 1794 171 3 20 chr20 3300569 3300705 -68853177 + AluJb SINE Alu 1 138 -174 2303 125 0 6 chr20 3300705 3301018 -68852864 + AluSx SINE Alu 1 311 -1 1794 171 3 20 chr20 3301018 3301186 -68852696 + AluJb SINE Alu 138 300 -12 250 320 0 0 chr20 3301284 3301381 -68852501 + L1 LINE L1 3609 3705 -2441 2028 150 3 7 chr20 3301603 3301910 -68851972 + AluSx SINE Alu 1 306 -6 244 258 0 0 chr20 3301920 3301982 -68851900 - L1MC/D LINE L1 -2254 5531 5470 2236 194 48 7 chr20 3301982 3302445 -68851437 - LTR53 LTR ERVL 0 519 38 1902 151 3 22 chr20 3302455 3302773 -68851109 - AluSq SINE Alu -1 312 1 548 263 74 47 chr20 3302786 3303122 -68850760 + L1MC4a LINE L1 5539 5816 -305 23 33 0 0 chr20 3303162 3303192 -68850690 + AT_rich Low_complexity Low_complexity 1 30 0 2302 110 0 19 chr20 3303225 3303534 -68850348 - AluSx SINE Alu -9 303 1 1266 157 52 30 chr20 3303686 3303916 -68849966 - AluJo SINE Alu -69 243 9 35 0 0 0 chr20 3304017 3304052 -68849830 + AT_rich Low_complexity Low_complexity 1 35 0 1788 192 57 65 chr20 3304073 3304578 -68849304 + MLT1D LTR MaLR 5 505 0 2275 94 11 0 chr20 3304676 3304962 -68848920 + AluSx SINE Alu 1 289 -23 606 28 0 0 chr20 3304963 3305035 -68848847 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 21 36 0 0 chr20 3305035 3305063 -68848819 + AT_rich Low_complexity Low_complexity 1 28 0 2233 102 3 0 chr20 3305492 3305795 -68848087 - AluSx SINE Alu -8 304 1 2172 97 0 34 chr20 3305850 3306198 -68847684 + AluSx SINE Alu 1 312 0 1939 123 10 10 chr20 3306486 3306778 -68847104 - AluJb SINE Alu -17 295 4 1242 118 14 59 chr20 3306790 3306827 -68847055 + AluSg/x SINE Alu 98 135 -177 2138 110 0 7 chr20 3306827 3307126 -68846756 + AluSp SINE Alu 1 297 -16 1242 118 14 59 chr20 3307126 3307309 -68846573 + AluSg/x SINE Alu 135 308 -4 485 304 149 0 chr20 3307914 3308128 -68845754 - MER112 DNA MER1_type -9 251 6 2419 50 0 3 chr20 3308635 3308932 -68844950 + AluY SINE Alu 1 296 -15 1719 151 7 43 chr20 3309104 3309409 -68844473 + AluJo SINE Alu 1 294 -18 1799 162 3 3 chr20 3309632 3309928 -68843954 + AluJb SINE Alu 1 296 -16 2337 89 0 6 chr20 3309928 3310241 -68843641 + AluY SINE Alu 1 311 0 304 114 0 0 chr20 3310576 3310620 -68843262 + Alu SINE Alu 1 44 -255 1543 76 22 31 chr20 3310620 3310843 -68843039 + AluSg/x SINE Alu 90 310 0 2245 88 7 3 chr20 3310891 3311198 -68842684 + AluSg SINE Alu 1 308 -2 2396 61 0 0 chr20 3311200 3311532 -68842350 + AluY SINE Alu 1 311 0 1938 134 0 3 chr20 3311662 3311952 -68841930 + AluSx SINE Alu 1 289 -23 1944 123 14 0 chr20 3311984 3312277 -68841605 + AluSx SINE Alu 1 297 -15 2103 81 42 0 chr20 3312364 3312648 -68841234 + AluSx SINE Alu 1 296 -16 533 186 143 56 chr20 3313107 3313268 -68840614 - MER5B DNA MER1_type -3 175 1 255 31 0 0 chr20 3315883 3315915 -68837967 + (CA)n Simple_repeat Simple_repeat 2 33 0 321 283 83 0 chr20 3316189 3316309 -68837573 - L2 LINE L2 -21 3251 3122 482 188 0 0 chr20 3316981 3317061 -68836821 + FRAM/FAM SINE Alu 1 73 -103 2267 97 0 0 chr20 3317281 3317579 -68836303 - AluSx SINE Alu -12 300 3 210 280 236 43 chr20 3319534 3320191 -68833691 + L2 LINE L2 1706 2489 -825 2408 50 0 13 chr20 3320306 3320608 -68833274 + AluY SINE Alu 1 298 -13 1860 174 144 104 chr20 3320616 3320851 -68833031 + L1MC3 LINE L1 6784 7008 -777 2369 88 0 0 chr20 3320851 3321159 -68832723 + AluSx SINE Alu 1 308 -4 1860 174 144 104 chr20 3321159 3321236 -68832646 + L1MC3 LINE L1 7008 7081 -704 246 241 0 0 chr20 3321236 3321290 -68832592 + MLT1F1 LTR MaLR 62 115 -452 1860 174 144 104 chr20 3321290 3321558 -68832324 + L1MC3 LINE L1 7081 7447 -338 1949 134 27 0 chr20 3321558 3321850 -68832032 + AluSx SINE Alu 1 300 -12 1860 174 144 104 chr20 3321850 3321874 -68832008 + L1MC3 LINE L1 7447 7469 -316 887 119 119 25 chr20 3321877 3322036 -68831846 + FRAM SINE Alu 1 171 -5 2139 102 7 0 chr20 3322036 3322330 -68831552 + AluSc SINE Alu 1 296 -13 2329 96 3 0 chr20 3322330 3322641 -68831241 + AluSp SINE Alu 1 313 0 863 202 37 49 chr20 3322642 3322770 -68831112 + L1MC3 LINE L1 6144 6272 -1513 1624 178 0 41 chr20 3322770 3323085 -68830797 + AluJb SINE Alu 1 302 -10 863 202 37 49 chr20 3323085 3323208 -68830674 + L1MC3 LINE L1 6272 7703 -82 188 214 71 102 chr20 3323536 3323634 -68830248 + L2 LINE L2 2763 2857 -457 263 228 89 40 chr20 3323637 3323738 -68830144 + LTR16A1 LTR ERVL 332 437 -20 2325 65 0 19 chr20 3324606 3324739 -68829143 + AluY SINE Alu 1 135 -176 2209 114 0 0 chr20 3324739 3325045 -68828837 + AluY SINE Alu 1 306 -5 2325 65 0 19 chr20 3325045 3325220 -68828662 + AluY SINE Alu 135 303 -8 1002 112 0 106 chr20 3325220 3325408 -68828474 + AluY SINE Alu 133 300 -11 2291 77 0 16 chr20 3325560 3325872 -68828010 - AluY SINE Alu -4 307 1 2053 74 88 0 chr20 3325881 3326164 -68827718 - AluY SINE Alu -3 308 1 2322 45 14 3 chr20 3328771 3329058 -68824824 - AluSg SINE Alu -18 292 3 207 0 0 0 chr20 3329227 3329250 -68824632 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr20 3329254 3329277 -68824605 + (GGGGA)n Simple_repeat Simple_repeat 1 23 0 1682 158 37 3 chr20 3329339 3329637 -68824245 + AluJb SINE Alu 1 308 -4 2092 134 0 3 chr20 3329683 3329996 -68823886 + AluSx SINE Alu 1 312 0 2230 102 3 0 chr20 3330017 3330322 -68823560 + AluSx SINE Alu 1 306 -6 1856 151 0 43 chr20 3330322 3330459 -68823423 + AluSx SINE Alu 2 143 -169 2370 71 7 3 chr20 3330459 3330767 -68823115 + AluY SINE Alu 1 309 -2 1856 151 0 43 chr20 3330767 3330954 -68822928 + AluSx SINE Alu 143 312 0 1451 154 8 8 chr20 3330997 3331244 -68822638 - AluJb SINE Alu -8 304 58 2020 112 0 3 chr20 3331322 3331630 -68822252 + AluSx SINE Alu 1 307 0 2092 116 0 3 chr20 3331632 3331934 -68821948 + AluSg SINE Alu 8 308 -2 1850 127 14 14 chr20 3332289 3332580 -68821302 - AluSp SINE Alu -16 297 7 230 263 0 18 chr20 3332581 3332638 -68821244 - MER5A DNA MER1_type -6 183 128 186 315 22 43 chr20 3333989 3334081 -68819801 + MIR SINE MIR 118 207 -55 193 191 0 0 chr20 3388289 3388331 -68765551 - MIR SINE MIR -89 119 78 358 152 16 64 chr20 3388490 3388584 -68765298 - MIR SINE MIR -74 188 102 220 301 187 28 chr20 3389257 3389546 -68764336 - L2 LINE L2 -719 2595 2261 2275 53 3 0 chr20 3389849 3390155 -68763727 + AluY SINE Alu 1 307 0 2167 92 3 3 chr20 3390174 3390477 -68763405 + AluSg SINE Alu 1 303 -7 234 205 181 24 chr20 3390735 3390818 -68763064 - MIR SINE MIR -15 247 152 1752 165 0 3 chr20 3391289 3391592 -68762290 + AluJb SINE Alu 5 306 -6 426 278 105 23 chr20 3391651 3391784 -68762098 - MIR SINE MIR -113 149 6 2245 94 0 3 chr20 3392001 3392300 -68761582 + AluSq SINE Alu 3 300 -13 224 233 0 0 chr20 3392417 3392460 -68761422 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392494 3392537 -68761345 + L2 LINE L2 3180 3222 -91 221 219 0 0 chr20 3392571 3392612 -68761270 + L2 LINE L2 3180 3220 -93 240 209 0 0 chr20 3392648 3392691 -68761191 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3392725 3392768 -68761114 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392802 3392845 -68761037 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3392879 3392922 -68760960 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392956 3392999 -68760883 + L2 LINE L2 3180 3222 -91 307 181 25 188 chr20 3393033 3393193 -68760689 + L2 LINE L2 3180 3313 0 185 319 104 39 chr20 3393211 3393471 -68760411 + L2 LINE L2 2196 2472 -842 3266 72 54 39 chr20 3393636 3394119 -68759763 + L1PA7 LINE L1 5664 6153 -1 1381 175 130 0 chr20 3394344 3394613 -68759269 - AluJo SINE Alu -8 304 1 391 354 52 68 chr20 3394647 3395011 -68758871 - L2 LINE L2 -4 3268 2911 1800 212 67 25 chr20 3395011 3395459 -68758423 - MLT1C LTR MaLR 0 467 1 391 354 52 68 chr20 3395459 3395535 -68758347 - L2 LINE L2 -361 2911 2835 419 301 93 82 chr20 3395598 3396027 -68757855 + MLT1K LTR MaLR 155 588 0 242 128 0 0 chr20 3396058 3396097 -68757785 - MLT1A2 LTR MaLR -4 370 332 1459 181 14 31 chr20 3396778 3397066 -68756816 - AluJo SINE Alu -27 285 3 201 74 0 0 chr20 3397209 3397236 -68756646 + (T)n Simple_repeat Simple_repeat 1 27 0 25 112 0 0 chr20 3397481 3397597 -68756285 + AT_rich Low_complexity Low_complexity 1 116 0 308 224 58 71 chr20 3398629 3398775 -68755107 - L1ME LINE L1 -311 5842 5684 1614 187 3 3 chr20 3398775 3399069 -68754813 - AluJb SINE Alu -18 294 1 308 224 58 71 chr20 3399069 3399126 -68754756 - L1ME LINE L1 -469 5684 5628 245 239 65 84 chr20 3399126 3399389 -68754493 - Charlie2 DNA MER1_type -1 2861 2604 1739 182 3 3 chr20 3399389 3399696 -68754186 + AluJo SINE Alu 1 307 -5 560 329 32 16 chr20 3399719 3399968 -68753914 - L1ME LINE L1 -1008 5121 4869 390 280 51 81 chr20 3400050 3400286 -68753596 - L1ME LINE L1 -1517 4612 4384 351 0 0 0 chr20 3400332 3400371 -68753511 + (TTA)n Simple_repeat Simple_repeat 2 40 0 460 269 117 59 chr20 3400577 3400833 -68753049 - L1ME LINE L1 -1820 4309 4039 370 260 26 52 chr20 3400867 3401033 -68752849 - L1ME LINE L1 -2248 3881 3719 2298 97 0 0 chr20 3401033 3401342 -68752540 - AluSg SINE Alu -1 309 1 370 260 26 52 chr20 3401342 3401367 -68752515 - L1ME LINE L1 -2410 3719 3695 324 291 66 18 chr20 3401384 3401601 -68752281 - L1ME LINE L1 -875 1615 1412 384 196 49 125 chr20 3401601 3401785 -68752097 - L1MC5 LINE L1 -48 7913 7744 1457 164 92 0 chr20 3401818 3402099 -68751783 - AluSx SINE Alu 0 312 6 1333 281 107 60 chr20 3402235 3402670 -68751212 - L1ME LINE L1 -4862 1257 844 1794 101 8 0 chr20 3402670 3402918 -68750964 - AluSg1 SINE Alu -24 285 36 1333 281 107 60 chr20 3402918 3403605 -68750277 - L1ME LINE L1 -5275 844 82 1475 260 62 61 chr20 3403620 3404369 -68749513 - L1M4 LINE L1 -984 5162 4409 2091 91 0 0 chr20 3404369 3404672 -68749210 - AluSx SINE Alu 0 314 12 1475 260 62 61 chr20 3404672 3404725 -68749157 - L1M4 LINE L1 -1737 4409 4358 697 271 160 46 chr20 3406575 3407074 -68746808 + L2 LINE L2 1698 2253 -1061 219 304 108 10 chr20 3407113 3407215 -68746667 + L2 LINE L2 2437 2548 -766 324 0 0 0 chr20 3407591 3407627 -68746255 + (TG)n Simple_repeat Simple_repeat 2 37 0 282 95 0 0 chr20 3408235 3408277 -68745605 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3408294 3408320 -68745562 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3408326 3408502 -68745380 + (TA)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr20 3408502 3408525 -68745357 + AT_rich Low_complexity Low_complexity 1 23 0 246 32 0 0 chr20 3408541 3408572 -68745310 + (TG)n Simple_repeat Simple_repeat 2 32 0 1622 179 3 27 chr20 3408586 3408883 -68744999 - AluJo SINE Alu -22 290 1 880 116 8 0 chr20 3408884 3409005 -68744877 - AluJo SINE Alu -178 134 13 184 330 135 69 chr20 3409364 3409743 -68744139 - L2 LINE L2 -50 3222 2819 192 322 58 58 chr20 3409784 3409958 -68743924 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3410127 3410233 -68743649 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3410482 3410505 -68743377 + AT_rich Low_complexity Low_complexity 1 23 0 284 286 150 41 chr20 3410726 3410873 -68743009 - MER5B DNA MER1_type -15 163 1 559 249 128 48 chr20 3411071 3411484 -68742398 + L1MC4a LINE L1 5749 6194 -1614 14504 23 0 5 chr20 3411507 3413336 -68740546 - L1PA3 LINE L1 -2928 3218 1399 18095 28 1 2 chr20 3413336 3416268 -68737614 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3416268 3416303 -68737579 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3416613 3416929 -68736953 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3416943 3417194 -68736688 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3417682 3419817 -68734065 + L1MDb LINE L1 7 2009 -4397 1976 123 3 31 chr20 3419817 3420162 -68733720 + AluSq SINE Alu 1 337 0 3363 211 73 70 chr20 3420162 3420436 -68733446 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3420436 3420965 -68732917 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3420966 3421318 -68732564 + L1MDb LINE L1 2273 2672 -3734 1352 191 21 82 chr20 3421331 3421722 -68732160 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3421721 3421764 -68732118 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3421764 3422070 -68731812 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3422070 3422126 -68731756 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3422126 3422149 -68731733 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3422151 3422431 -68731451 + L1MEd LINE L1 1084 1366 -5050 495 53 0 160 chr20 3422432 3422526 -68731356 + MADE1 DNA Mariner 2 80 0 2277 81 7 17 chr20 3422547 3422845 -68731037 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3422857 3422886 -68730996 - MADE1 DNA Mariner -43 37 9 263 292 44 15 chr20 3422922 3423059 -68730823 + L1MEd LINE L1 1252 1392 -5034 2136 62 52 72 chr20 3423117 3423423 -68730459 - AluSc SINE Alu -7 302 3 766 129 9 9 chr20 3423489 3423605 -68730277 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3423607 3423636 -68730246 + AT_rich Low_complexity Low_complexity 1 29 0 764 257 119 63 chr20 3423636 3423755 -68730127 + L1MEd LINE L1 1511 1622 -4804 923 199 92 10 chr20 3423755 3423961 -68729921 - MER58A DNA MER1_type 0 224 2 764 257 119 63 chr20 3423961 3424905 -68728977 + L1MEd LINE L1 1622 2781 -3645 2119 114 0 23 chr20 3424920 3425226 -68728656 - AluSx SINE Alu -13 299 1 1303 245 62 90 chr20 3425232 3425685 -68728197 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3425685 3425909 -68727973 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3425909 3426312 -68727570 - L1MC4 LINE L1 -419 7623 7210 700 224 122 25 chr20 3426416 3426777 -68727105 + L1MEd LINE L1 3151 3546 -2880 207 0 0 0 chr20 3427508 3427531 -68726351 + (TA)n Simple_repeat Simple_repeat 2 24 0 9502 32 14 0 chr20 3427531 3429458 -68724424 - L1PA4 LINE L1 -2 6153 4211 915 74 0 0 chr20 3429463 3429584 -68724298 - L1P LINE L1 -6025 121 1 1061 259 91 37 chr20 3429639 3430100 -68723782 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3430100 3430399 -68723483 + AluJb SINE Alu 1 302 -10 1061 259 91 37 chr20 3430399 3430640 -68723242 + L1MEd LINE L1 4277 4504 -1922 827 278 140 105 chr20 3430661 3431796 -68722086 - L2 LINE L2 -1039 2275 1101 493 245 66 0 chr20 3431811 3431962 -68721920 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3431965 3432030 -68721852 - MLT1L LTR MaLR -6 609 546 3319 56 9 0 chr20 3432146 3432578 -68721304 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3432624 3432877 -68721005 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3432948 3433210 -68720672 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3433797 3433936 -68719946 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3433940 3434060 -68719822 + L1MB7 LINE L1 6060 6184 0 406 222 202 30 chr20 3434091 3434294 -68719588 - L1MC5 LINE L1 -118 7843 7606 333 280 30 8 chr20 3434298 3434430 -68719452 - L1MC/D LINE L1 -1992 5816 5682 384 325 80 15 chr20 3434826 3435026 -68718856 + HAL1 LINE L1 1055 1267 -1240 736 155 8 23 chr20 3435026 3435180 -68718702 + L1PB2 LINE L1 6013 6164 0 250 275 50 17 chr20 3435246 3435366 -68718516 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3435915 3436219 -68717663 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3436362 3436406 -68717476 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3436407 3436576 -68717306 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3436578 3436636 -68717246 + L1MEc LINE L1 2954 3011 -3204 517 180 90 0 chr20 3436650 3436772 -68717110 + L1PA16 LINE L1 6034 6166 0 2056 251 34 13 chr20 3436779 3437219 -68716663 + L1M4 LINE L1 2346 2808 -3338 1545 160 21 46 chr20 3437219 3437500 -68716382 - AluJo SINE Alu -26 286 13 2056 251 34 13 chr20 3437500 3437767 -68716115 + L1M4 LINE L1 2808 3068 -3078 29644 89 13 16 chr20 3437767 3443504 -68710378 + L1PA7 LINE L1 736 6469 0 1808 242 115 38 chr20 3443471 3443511 -68710371 + L1ME2 LINE L1 5595 5631 -1018 * 2256 93 3 0 chr20 3443511 3443801 -68710081 + AluSg1 SINE Alu 1 291 -18 2090 132 84 3 chr20 3443801 3444156 -68709726 + L1PA15 LINE L1 5777 6160 -5 1808 242 115 38 chr20 3444156 3444234 -68709648 + L1ME2 LINE L1 5631 5702 -947 1846 179 3 7 chr20 3444234 3444536 -68709346 - AluJb SINE Alu -11 301 1 1808 242 115 38 chr20 3444536 3445241 -68708641 + L1ME2 LINE L1 5702 6645 -4 480 298 121 27 chr20 3445268 3445600 -68708282 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 3445640 3445690 -68708192 + (TA)n Simple_repeat Simple_repeat 1 53 0 1963 119 0 58 chr20 3445691 3446002 -68707880 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 3446649 3447070 -68706812 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 3447220 3447246 -68706636 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 3447346 3447572 -68706310 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 3448060 3448192 -68705690 - LTR16A LTR ERVL -103 347 237 2543 51 0 0 chr20 3448192 3448484 -68705398 - AluY SINE Alu -19 292 1 508 250 190 33 chr20 3448484 3448651 -68705231 - LTR16A LTR ERVL -213 237 1 1232 283 50 6 chr20 3448767 3449128 -68704754 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 3449198 3449247 -68704635 + (TA)n Simple_repeat Simple_repeat 1 48 0 568 185 8 46 chr20 3449247 3449377 -68704505 - FLAM_C SINE Alu -16 127 3 245 164 36 0 chr20 3449403 3449458 -68704424 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 3449504 3450066 -68703816 - L2 LINE L2 -2203 1111 468 913 207 143 45 chr20 3450111 3450377 -68703505 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 3450556 3450639 -68703243 + AT_rich Low_complexity Low_complexity 1 83 0 351 0 0 0 chr20 3451011 3451050 -68702832 + (CA)n Simple_repeat Simple_repeat 2 40 0 2220 101 7 0 chr20 3451056 3451352 -68702530 - AluSq SINE Alu -15 298 1 4534 168 54 89 chr20 3451549 3451618 -68702264 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 3451618 3451933 -68701949 - AluSx SINE Alu 0 313 1 4534 168 54 89 chr20 3451933 3452935 -68700947 - Charlie1 DNA MER1_type -70 2691 1656 3150 47 0 0 chr20 3452935 3453319 -68700563 - L1PA5 LINE L1 -1 6153 5770 4534 168 54 89 chr20 3453319 3453377 -68700505 - Charlie1 DNA MER1_type -1105 1656 1598 1391 6 0 12 chr20 3453377 3453540 -68700342 - L1PA2 LINE L1 0 6155 5995 4534 168 54 89 chr20 3453540 3453913 -68699969 - Charlie1 DNA MER1_type -1163 1598 1 411 288 61 58 chr20 3453949 3454244 -68699638 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 3454220 3454528 -68699354 + L2 LINE L2 2809 3180 -133 * 242 292 79 63 chr20 3454589 3454904 -68698978 - L2 LINE L2 -1389 1925 1606 245 342 108 9 chr20 3455410 3455521 -68698361 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 3455902 3456048 -68697834 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 3456191 3456217 -68697665 + (TG)n Simple_repeat Simple_repeat 1 26 0 2775 7 0 0 chr20 3456499 3456799 -68697083 - AluY SINE Alu -11 300 1 2018 171 12 0 chr20 3456816 3457160 -68696722 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 3457696 3457736 -68696146 - MIR SINE MIR -5 257 218 402 176 0 37 chr20 3457963 3458071 -68695811 + C-rich Low_complexity Low_complexity 4 107 0 1719 136 0 43 chr20 3458081 3458361 -68695521 - AluJo SINE Alu -44 268 1 853 247 98 47 chr20 3458479 3458775 -68695107 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 3458862 3459164 -68694718 + AluSx SINE Alu 1 299 -13 1734 159 0 66 chr20 3459173 3459506 -68694376 + AluJb SINE Alu 1 311 -1 330 302 79 7 chr20 3459719 3459858 -68694024 - L1MC/D LINE L1 -2058 5750 5602 243 0 0 0 chr20 3459919 3459946 -68693936 + (TGG)n Simple_repeat Simple_repeat 3 29 0 257 339 59 42 chr20 3459961 3460247 -68693635 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 3460482 3460508 -68693374 + AT_rich Low_complexity Low_complexity 1 26 0 2166 109 17 7 chr20 3460511 3460813 -68693069 + AluSq SINE Alu 5 309 -4 381 297 146 21 chr20 3461377 3461569 -68692313 - MIR SINE MIR 0 262 47 2313 100 0 3 chr20 3461812 3462113 -68691769 - AluSg SINE Alu -10 300 1 1290 199 101 38 chr20 3463653 3463741 -68690141 - MER2 DNA MER2_type -8 337 256 2285 99 3 3 chr20 3463741 3464043 -68689839 + AluSx SINE Alu 1 302 -10 1290 199 101 38 chr20 3464043 3464271 -68689611 - MER2 DNA MER2_type -89 256 1 292 231 56 28 chr20 3464802 3464910 -68688972 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 3465040 3465068 -68688814 + AT_rich Low_complexity Low_complexity 1 28 0 1573 147 0 0 chr20 3465468 3465693 -68688189 + AluSq SINE Alu 1 225 -88 904 173 0 32 chr20 3465693 3465878 -68688004 - L1P LINE L1 -1290 4856 4678 456 266 18 0 chr20 3466310 3466423 -68687459 + L2 LINE L2 769 883 -2431 1349 218 62 87 chr20 3466424 3466631 -68687251 + LTR16A1 LTR ERVL 1 212 -245 487 206 124 0 chr20 3466631 3466728 -68687154 - MER81 DNA DNA -4 110 2 1349 218 62 87 chr20 3466728 3466989 -68686893 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 3466992 3467069 -68686813 + L2 LINE L2 880 962 -2352 550 306 43 14 chr20 3467076 3467285 -68686597 + L2 LINE L2 1290 1504 -1810 575 220 61 0 chr20 3467289 3467421 -68686461 + MER3 DNA MER1_type 1 140 -69 1947 238 97 21 chr20 3467423 3467955 -68685927 + L2 LINE L2 1931 2516 -798 2016 217 127 70 chr20 3467955 3468513 -68685369 - MLT1E LTR MaLR -2 591 2 1947 238 97 21 chr20 3468513 3468586 -68685296 + L2 LINE L2 2516 2582 -732 465 350 132 20 chr20 3468824 3469463 -68684419 + L2 LINE L2 2583 3310 -3 2315 71 4 0 chr20 3469728 3470056 -68683826 - AluY SINE Alu 0 329 1 2683 19 6 10 chr20 3470413 3470725 -68683157 - AluY SINE Alu 0 311 1 1871 213 89 39 chr20 3472703 3473290 -68680592 + HAL1b LINE L1 351 966 -382 327 235 103 65 chr20 3473665 3473864 -68680018 - L1ME1 LINE L1 -276 5886 5684 480 193 67 47 chr20 3474020 3474170 -68679712 + HAL1b LINE L1 1196 1348 0 405 172 32 11 chr20 3475460 3475553 -68678329 - L1MB3 LINE L1 -2 6181 6087 2711 111 31 7 chr20 3475561 3475986 -68677896 - L1MA4 LINE L1 -282 6018 5584 2240 78 0 7 chr20 3476463 3476773 -68677109 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 3476893 3476917 -68676965 + AT_rich Low_complexity Low_complexity 1 24 0 1723 158 14 7 chr20 3477157 3477448 -68676434 - AluJo SINE Alu -19 293 1 1293 202 20 4 chr20 3479279 3479527 -68674355 - L1MB3 LINE L1 0 6183 5932 354 322 40 7 chr20 3479739 3479888 -68673994 - L2 LINE L2 -220 3052 2899 2282 88 0 0 chr20 3480206 3480489 -68673393 + AluY SINE Alu 1 283 -28 1939 100 9 94 chr20 3480908 3481249 -68672633 + AluSx SINE Alu 1 312 0 2163 110 7 10 chr20 3482044 3482353 -68671529 + AluSx SINE Alu 1 308 -4 237 239 90 45 chr20 3482687 3482754 -68671128 + L2 LINE L2 3185 3254 -18 2369 75 7 7 chr20 3483431 3483736 -68670146 + AluY SINE Alu 1 305 -6 1111 126 0 6 chr20 3483784 3483943 -68669939 + FRAM SINE Alu 1 154 -22 3336 203 19 13 chr20 3483957 3484584 -68669298 + MER82 DNA MER2_type 1 631 -22 2747 125 101 9 chr20 3484601 3485056 -68668826 - Tigger3(Golem) DNA MER2_type -2 3027 2531 274 240 0 0 chr20 3485060 3485110 -68668772 - Tigger3(Golem) DNA MER2_type -2969 60 11 2015 158 0 0 chr20 3485211 3485508 -68668374 + AluJo SINE Alu 1 297 -15 976 234 118 17 chr20 3485512 3485867 -68668015 - L1MC5 LINE L1 -311 7650 7260 * 1048 196 27 162 chr20 3485835 3486354 -68667528 - L1MC5 LINE L1 -902 7059 6611 2027 211 41 41 chr20 3486437 3486629 -68667253 - L1MC5 LINE L1 -1907 5901 5710 931 48 112 0 chr20 3486629 3486754 -68667128 - MER85 DNA T2_type 0 139 1 2027 211 41 41 chr20 3486754 3487124 -68666758 - L1MC5 LINE L1 -2097 5711 5339 240 288 81 9 chr20 3487384 3487495 -68666387 - L1 LINE L1 -1141 5005 4887 26 0 0 0 chr20 3487633 3487659 -68666223 + AT_rich Low_complexity Low_complexity 1 26 0 1018 128 0 0 chr20 3487958 3488091 -68665791 + FLAM_A SINE Alu 1 133 0 737 173 8 23 chr20 3488665 3488798 -68665084 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 3488798 3488824 -68665058 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1630 131 123 0 chr20 3489158 3489460 -68664422 - AluSx SINE Alu 0 333 1 1862 144 10 20 chr20 3489652 3489950 -68663932 + AluJb SINE Alu 1 295 -17 2237 102 0 20 chr20 3490379 3490684 -68663198 - AluSg SINE Alu -11 299 1 251 270 0 24 chr20 3491901 3491996 -68661886 - MIR3 SINE MIR -3 205 113 585 76 0 0 chr20 3492092 3492171 -68661711 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 2362 112 0 0 chr20 3494626 3494938 -68658944 + AluSx SINE Alu 1 312 0 1839 140 3 37 chr20 3496382 3496682 -68657200 + AluJo SINE Alu 1 290 -22 1162 150 155 19 chr20 3496911 3497118 -68656764 - MER46A DNA MER2_type -1 235 1 873 154 0 37 chr20 3497380 3497516 -68656366 + FLAM_C SINE Alu 1 131 -2 210 235 0 0 chr20 3498115 3498166 -68655716 + A-rich Low_complexity Low_complexity 4 54 0 255 226 19 0 chr20 3498891 3498944 -68654938 + MER112 DNA MER1_type 195 248 -12 2379 100 0 3 chr20 3498949 3499259 -68654623 + AluSc SINE Alu 1 309 0 303 353 0 0 chr20 3499756 3499872 -68654010 + MIR3 SINE MIR 84 199 -9 314 272 50 56 chr20 3500696 3500876 -68653006 + L1MB8 LINE L1 5181 5359 -787 3238 162 109 50 chr20 3501073 3501868 -68652014 + L1MB7 LINE L1 5195 6033 -151 612 188 187 26 chr20 3501896 3502085 -68651797 + L1MB8 LINE L1 5845 6050 -120 572 171 130 41 chr20 3502085 3502231 -68651651 + L1MB8 LINE L1 5845 6003 -175 3772 199 40 20 chr20 3502244 3503245 -68650637 - L1M4 LINE L1 -609 5575 4549 1843 134 3 11 chr20 3503245 3503570 -68650312 - AluJb SINE Alu 0 323 1 3772 199 40 20 chr20 3503570 3503675 -68650207 - L1M4 LINE L1 -1635 4549 4448 2464 221 54 40 chr20 3503667 3504394 -68649488 - L1M4 LINE L1 -2049 4097 3358 * 2215 86 3 58 chr20 3504394 3504720 -68649162 - AluSc SINE Alu -1 308 1 2464 221 54 40 chr20 3504720 3504738 -68649144 - L1M4 LINE L1 -2788 3358 3342 2273 99 0 3 chr20 3505379 3505673 -68648209 - AluSq SINE Alu -20 293 1 261 196 0 0 chr20 3505854 3505905 -68647977 - MER91B DNA MER1_type -138 52 2 319 281 141 22 chr20 3505977 3506162 -68647720 + L1ME4a LINE L1 5670 5876 -245 318 239 96 0 chr20 3506210 3506335 -68647547 + L1ME4a LINE L1 1200 6040 -7 2342 214 98 26 chr20 3506858 3507499 -68646383 - MER76 LTR ERV -1 687 1 2437 97 0 0 chr20 3507540 3507850 -68646032 + AluSx SINE Alu 1 310 -2 215 203 270 0 chr20 3508477 3508551 -68645331 - MIR SINE MIR -90 118 25 664 280 129 4 chr20 3508781 3509006 -68644876 - MIR SINE MIR -1 261 9 186 286 14 29 chr20 3509031 3509101 -68644781 - MIR SINE MIR -193 69 1 251 197 106 15 chr20 3509538 3509604 -68644278 + L2 LINE L2 3241 3312 -1 1104 218 68 12 chr20 3512493 3512909 -68640973 + L1ME LINE L1 5028 5462 -704 977 190 23 36 chr20 3512916 3513137 -68640745 - Charlie1 DNA MER1_type -284 2477 2260 284 331 11 56 chr20 3513510 3513688 -68640194 + Charlie7 DNA MER1_type 24 193 -2419 2130 278 145 35 chr20 3513882 3514957 -68638925 + Charlie7 DNA MER1_type 483 1676 -936 1322 198 8 4 chr20 3514957 3515194 -68638688 - MER8 DNA MER2_type -1 238 1 1065 223 193 18 chr20 3515194 3515622 -68638260 + Charlie7 DNA MER1_type 1675 2178 -434 711 235 87 32 chr20 3515654 3515999 -68637883 + Charlie7 DNA MER1_type 2221 2584 -28 739 234 46 46 chr20 3516499 3516696 -68637186 + MIR SINE MIR 3 199 -63 1730 185 0 16 chr20 3517003 3517316 -68636566 + AluJo SINE Alu 1 308 -4 493 275 32 50 chr20 3517356 3517469 -68636413 + MIR SINE MIR 49 158 -104 2279 109 0 3 chr20 3517469 3517772 -68636110 + AluSx SINE Alu 1 302 -10 493 275 32 50 chr20 3517772 3517876 -68636006 + MIR SINE MIR 158 262 0 2410 93 10 0 chr20 3518106 3518416 -68635466 + AluSq SINE Alu 1 313 0 2499 75 7 0 chr20 3518902 3519210 -68634672 - AluSp SINE Alu -3 310 1 639 282 110 18 chr20 3519223 3519450 -68634432 + MIR SINE MIR 15 262 0 6169 67 16 2 chr20 3520561 3521348 -68632534 + L1PA11 LINE L1 5375 6172 -2 766 271 74 23 chr20 3522091 3522522 -68631360 - L1M4 LINE L1 -2324 3822 3370 6648 137 39 17 chr20 3522527 3524107 -68629775 - L1MA4 LINE L1 0 6300 4667 2207 135 0 0 chr20 3524107 3524419 -68629463 + AluSq SINE Alu 1 312 -1 6648 137 39 17 chr20 3524419 3524963 -68628919 - L1MA4 LINE L1 -1633 4667 4136 2694 149 43 17 chr20 3525033 3525126 -68628756 + L1MB4 LINE L1 5685 5774 -406 369 62 0 0 chr20 3525126 3525174 -68628708 + (TG)n Simple_repeat Simple_repeat 2 49 0 2694 149 43 17 chr20 3525174 3525563 -68628319 + L1MB4 LINE L1 5774 6180 0 1009 193 16 44 chr20 3525588 3525837 -68628045 + L1MD2 LINE L1 4616 4857 -1289 780 192 8 0 chr20 3525846 3525976 -68627906 - FLAM_A SINE Alu -6 136 6 1914 137 0 70 chr20 3525990 3526318 -68627564 - AluJb SINE Alu -7 305 1 3547 182 18 39 chr20 3526320 3526882 -68627000 + L1MD2 LINE L1 4849 5376 -983 2083 125 10 10 chr20 3526882 3527179 -68626703 + AluSx SINE Alu 1 297 -15 3547 182 18 39 chr20 3527179 3527747 -68626135 + L1MD2 LINE L1 5376 5954 -405 497 137 21 42 chr20 3527775 3527870 -68626012 - MLT1E1 LTR MaLR -341 313 221 394 216 45 0 chr20 3527858 3527946 -68625936 - MLT1E1 LTR MaLR -558 96 5 * 21 0 0 0 chr20 3528128 3528149 -68625733 + AT_rich Low_complexity Low_complexity 1 21 0 2235 161 92 14 chr20 3530048 3530483 -68623399 - L1MB7 LINE L1 -8 6176 5708 1765 145 4 7 chr20 3530591 3530867 -68623015 + AluSx SINE Alu 23 297 -15 1510 122 5 5 chr20 3530966 3531187 -68622695 - AluSg/x SINE Alu 0 310 90 2501 52 7 0 chr20 3531187 3531477 -68622405 + L1PA4 LINE L1 5864 6155 0 541 205 49 44 chr20 3532755 3532960 -68620922 + L1MC5 LINE L1 7723 7928 -33 894 148 0 22 chr20 3532960 3533095 -68620787 + FLAM_C SINE Alu 2 133 0 411 263 73 69 chr20 3533653 3533927 -68619955 + HAL1 LINE L1 2225 2499 -8 191 88 29 0 chr20 3534925 3534959 -68618923 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 202 261 0 0 chr20 3535479 3535525 -68618357 + C-rich Low_complexity Low_complexity 3 48 0 414 0 0 0 chr20 3535642 3535688 -68618194 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 1904 128 11 7 chr20 3535692 3535966 -68617916 - AluSx SINE Alu -37 275 1 1588 63 72 36 chr20 3536300 3536521 -68617361 - MER30 DNA MER1_type 0 230 2 284 246 14 0 chr20 3536788 3536857 -68617025 - MER46C DNA MER2_type 0 338 269 374 243 37 47 chr20 3537346 3537453 -68616429 - L2 LINE L2 0 3313 3208 535 251 38 66 chr20 3539176 3539359 -68614523 + MER104 DNA MER2_type 2 179 -1 1761 237 97 97 chr20 3540463 3541372 -68612510 - HAL1 LINE L1 0 2507 1596 2097 139 0 0 chr20 3541372 3541674 -68612208 + AluJb SINE Alu 1 302 -10 1761 237 97 97 chr20 3541674 3541819 -68612063 - HAL1 LINE L1 -910 1597 1453 321 225 0 25 chr20 3541833 3541913 -68611969 - L1ME3A LINE L1 -12 6158 6081 376 258 33 53 chr20 3542047 3542198 -68611684 - L1ME3A LINE L1 -104 6066 5919 2301 100 0 13 chr20 3542200 3542509 -68611373 - AluSx SINE Alu -7 305 1 1020 241 109 68 chr20 3542524 3542627 -68611255 + L1M4 LINE L1 2902 2999 -3147 889 171 114 0 chr20 3542627 3542785 -68611097 + MER5B DNA MER1_type 3 178 0 1020 241 109 68 chr20 3542785 3543296 -68610586 + L1M4 LINE L1 2999 3541 -2605 2470 65 0 0 chr20 3543313 3543606 -68610276 + AluY SINE Alu 1 293 -18 417 247 72 46 chr20 3543615 3543809 -68610073 + L1M4 LINE L1 3891 4089 -2057 1408 171 57 0 chr20 3543809 3544037 -68609845 + Tigger7 DNA MER2_type 25 265 -468 524 185 11 0 chr20 3544038 3544130 -68609752 + Tigger7 DNA MER2_type 2390 2482 -5 295 267 67 30 chr20 3544750 3544885 -68608997 + L2 LINE L2 2849 2988 -284 2384 221 58 45 chr20 3544905 3545614 -68608268 - MER21B LTR ERV1 -83 780 63 326 305 109 6 chr20 3545655 3545829 -68608053 + L2 LINE L2 3109 3300 -13 1876 146 16 25 chr20 3546357 3546672 -68607210 - AluJo SINE Alu 0 312 1 795 284 75 19 chr20 3547323 3547643 -68606239 + L2 LINE L2 2070 2407 -907 912 273 163 28 chr20 3547643 3548258 -68605624 + L2 LINE L2 2581 3275 -38 1812 110 46 19 chr20 3548302 3548565 -68605317 + AluSx SINE Alu 21 290 -22 2740 94 46 23 chr20 3550392 3550818 -68603064 + L1PB1 LINE L1 5742 6176 0 22 0 0 0 chr20 3551230 3551252 -68602630 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr20 3551334 3551376 -68602506 + AT_rich Low_complexity Low_complexity 1 42 0 630 297 70 18 chr20 3551998 3552227 -68601655 - MIR SINE MIR 0 262 22 439 294 127 8 chr20 3553087 3553295 -68600587 - MIR SINE MIR -23 239 12 3864 81 4 6 chr20 3553540 3554033 -68599849 - L1PA8 LINE L1 -2 6170 5679 2041 122 7 0 chr20 3554669 3554975 -68598907 - AluSx SINE Alu 0 308 1 1231 255 100 59 chr20 3555285 3556058 -68597824 + L1MEd LINE L1 563 1303 -5007 3679 170 28 6 chr20 3556058 3556710 -68597172 + L1MB3 LINE L1 5511 6176 -7 1231 255 100 59 chr20 3556710 3556731 -68597151 + L1MEd LINE L1 1303 1322 -4988 2343 114 0 0 chr20 3556731 3557038 -68596844 + AluSx SINE Alu 1 307 -5 1231 255 100 59 chr20 3557038 3557291 -68596591 + L1MEd LINE L1 1322 1661 -4649 1596 273 137 20 chr20 3557437 3558101 -68595781 + L2 LINE L2 1957 2698 -616 565 188 157 13 chr20 3558150 3558381 -68595501 + MLT1E2 LTR MaLR 1 296 -330 896 187 0 0 chr20 3558386 3558541 -68595341 - FRAM SINE Alu -15 161 7 706 159 4 230 chr20 3558546 3558798 -68595084 + MLT1E2 LTR MaLR 410 604 -22 959 104 0 45 chr20 3558807 3558941 -68594941 + AluJo/FLAM SINE Alu 2 129 -173 458 129 0 71 chr20 3558870 3558955 -68594927 + FLAM_C SINE Alu 65 143 0 309 313 134 22 chr20 3560315 3560449 -68593433 - L1ME4a LINE L1 -199 5922 5774 499 217 130 7 chr20 3561460 3561598 -68592284 - MIR SINE MIR -16 246 92 483 228 168 60 chr20 3561840 3562072 -68591810 + L1MC4a LINE L1 5914 6170 -1638 22 35 0 0 chr20 3562073 3562102 -68591780 + AT_rich Low_complexity Low_complexity 1 29 0 255 175 0 0 chr20 3562964 3563021 -68590861 + CT-rich Low_complexity Low_complexity 3 59 0 195 100 0 0 chr20 3563022 3563052 -68590830 + (CA)n Simple_repeat Simple_repeat 1 30 0 465 229 106 37 chr20 3567412 3567769 -68586113 + MLT1J2 LTR MaLR 1 450 0 180 0 0 0 chr20 3567989 3568009 -68585873 + (CAA)n Simple_repeat Simple_repeat 2 21 0 234 0 0 0 chr20 3568450 3568476 -68585406 + (A)n Simple_repeat Simple_repeat 1 26 0 307 210 0 17 chr20 3569085 3569167 -68584715 + MLT1J LTR MaLR 247 381 -125 783 260 183 12 chr20 3569252 3569591 -68584291 - L2 LINE L2 -6 3307 2911 697 303 34 4 chr20 3569595 3569833 -68584049 + MER20B DNA MER1_type 202 446 -337 1046 209 88 86 chr20 3570834 3571207 -68582675 - MLT1D LTR MaLR -2 503 127 1924 130 38 0 chr20 3571207 3571499 -68582383 + AluJo SINE Alu 1 303 -9 1046 209 88 86 chr20 3571499 3571604 -68582278 - MLT1D LTR MaLR -378 127 24 1648 168 30 13 chr20 3571728 3572032 -68581850 - AluJo SINE Alu -3 309 1 1448 85 0 5 chr20 3572036 3572254 -68581628 - AluSc SINE Alu 0 308 92 581 278 12 0 chr20 3572254 3572423 -68581459 + MER20B DNA MER1_type 276 446 -337 497 121 0 0 chr20 3572536 3572602 -68581280 - AluS SINE Alu -243 66 1 357 313 134 5 chr20 3573001 3573218 -68580664 + MLT1K LTR MaLR 234 478 -110 2168 116 0 0 chr20 3573280 3573573 -68580309 + AluSx SINE Alu 1 293 -19 734 218 67 27 chr20 3573736 3573961 -68579921 - LTR16A1 LTR ERVL 0 457 224 408 228 24 31 chr20 3574016 3574143 -68579739 - LTR16A1 LTR ERVL -331 126 1 753 158 8 0 chr20 3574248 3574368 -68579514 + FRAM SINE Alu 48 168 -8 230 91 23 45 chr20 3574421 3574465 -68579417 - MLT1J LTR MaLR -378 133 91 239 272 112 32 chr20 3574519 3574644 -68579238 - MIR3 SINE MIR -41 167 33 23 0 0 0 chr20 3576338 3576361 -68577521 + GC_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr20 3576410 3576434 -68577448 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 3579163 3579198 -68574684 + AT_rich Low_complexity Low_complexity 1 35 0 832 126 0 16 chr20 3579198 3579325 -68574557 - FLAM_C SINE Alu -18 125 1 1486 199 70 0 chr20 3579330 3579716 -68574166 - L1MD3 LINE L1 -8 7987 7575 245 150 0 0 chr20 3579781 3579821 -68574061 + Alu SINE Alu 250 289 -13 2091 108 0 17 chr20 3579880 3579891 -68573991 - AluSq SINE Alu -22 291 281 207 0 0 0 chr20 3579891 3579914 -68573968 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2091 108 0 17 chr20 3579914 3580198 -68573684 - AluSq SINE Alu -32 281 1 1496 117 24 12 chr20 3580198 3580446 -68573436 - LTR43 LTR ERV1 -351 251 1 3917 89 31 25 chr20 3580599 3580983 -68572899 - MER41A LTR ERV1 0 554 165 2291 84 24 0 chr20 3580983 3581281 -68572601 - AluSx SINE Alu -7 305 1 3917 89 31 25 chr20 3581281 3581447 -68572435 - MER41A LTR ERV1 -389 165 1 1227 238 122 45 chr20 3582122 3582145 -68571737 + MER74B LTR ERVL 56 76 -546 2276 101 0 0 chr20 3582145 3582443 -68571439 - AluSq SINE Alu -15 298 1 1227 238 122 45 chr20 3582443 3582927 -68570955 + MER74B LTR ERVL 76 602 -20 270 143 0 20 chr20 3583025 3583074 -68570808 + MLT1K LTR MaLR 502 549 0 236 59 59 59 chr20 3583231 3583299 -68570583 + (CCA)n Simple_repeat Simple_repeat 2 69 0 1750 158 7 3 chr20 3583385 3583670 -68570212 - AluJo SINE Alu -21 291 6 191 191 0 0 chr20 3588409 3588451 -68565431 - MIR SINE MIR -89 119 78 341 145 26 53 chr20 3588610 3588686 -68565196 - MIR SINE MIR -74 188 115 218 211 96 19 chr20 3591464 3591516 -68562366 + MIR SINE MIR 195 250 -12 1980 86 7 14 chr20 3591831 3592109 -68561773 - AluSx SINE Alu 0 312 37 371 266 28 7 chr20 3594128 3594261 -68559621 + MIR SINE MIR 50 191 -17 338 224 172 0 chr20 3594411 3594527 -68559355 + MER69 DNA AcHobo 1 136 -1090 210 71 0 0 chr20 3597346 3597374 -68556508 + (CAG)n Simple_repeat Simple_repeat 2 29 0 232 118 0 59 chr20 3597522 3597573 -68556309 + (CCCCCG)n Simple_repeat Simple_repeat 5 52 0 2412 67 0 0 chr20 3598207 3598507 -68555375 - AluSc SINE Alu -9 300 1 2392 82 3 0 chr20 3598530 3598836 -68555046 - AluSp SINE Alu -6 307 1 1497 178 0 48 chr20 3599166 3599410 -68554472 - AluJo SINE Alu -5 307 80 2382 97 0 0 chr20 3599410 3599720 -68554162 + AluSq SINE Alu 1 310 -3 1497 178 0 48 chr20 3599720 3599789 -68554093 - AluJo SINE Alu -232 80 9 327 306 45 13 chr20 3599833 3599849 -68554033 - L1MA10 LINE L1 -2 6332 6317 1438 239 38 23 chr20 3599849 3600292 -68553590 - L1ME2 LINE L1 -9 6155 5706 811 163 2 9 chr20 3600301 3600470 -68553412 - MLT2B2 LTR ERVL -19 535 322 303 312 113 39 chr20 3600660 3600891 -68552991 + L2 LINE L2 2979 3226 -46 369 188 12 0 chr20 3601497 3601577 -68552305 - L1ME2 LINE L1 -533 5637 5557 * 758 219 139 0 chr20 3601573 3601811 -68552071 + L1ME3A LINE L1 5900 6170 0 185 280 120 13 chr20 3602133 3602208 -68551674 - L2 LINE L2 -29 3284 3202 795 283 111 6 chr20 3603201 3603554 -68550328 + MLT1J LTR MaLR 91 480 -31 1071 192 264 5 chr20 3605694 3606122 -68547760 + MLT1H LTR MaLR 11 549 0 260 313 173 6 chr20 3606153 3606226 -68547656 - MIR SINE MIR -7 255 196 2074 144 0 0 chr20 3606226 3606532 -68547350 - AluSx SINE Alu -1 311 6 260 313 173 6 chr20 3606532 3606637 -68547245 - MIR SINE MIR -66 196 47 378 0 0 0 chr20 3609581 3609623 -68544259 + (CA)n Simple_repeat Simple_repeat 2 43 0 243 303 126 8 chr20 3610577 3610696 -68543186 + L2 LINE L2 3180 3312 -1 1931 119 61 0 chr20 3611226 3611504 -68542378 - AluSx SINE Alu -17 295 1 309 26 0 0 chr20 3611527 3611536 -68542346 + (CA)n Simple_repeat Simple_repeat 1 47 0 309 26 0 0 chr20 3611536 3611574 -68542308 + (CA)n Simple_repeat Simple_repeat 2 39 0 683 280 37 5 chr20 3613639 3613828 -68540054 + MER91A DNA MER1_type 2 196 0 1753 156 13 36 chr20 3615101 3615223 -68538659 + AluJo SINE Alu 1 124 -188 2063 113 10 0 chr20 3615223 3615514 -68538368 - AluSx SINE Alu -18 294 1 * 2398 97 0 0 chr20 3615513 3615824 -68538058 - AluSx SINE Alu -1 311 1 1753 156 13 36 chr20 3615824 3616008 -68537874 + AluJo SINE Alu 434 300 -12 2334 90 0 6 chr20 3616094 3616405 -68537477 - AluSc SINE Alu 0 309 1 180 370 65 0 chr20 3617211 3617303 -68536579 - MIR SINE MIR -43 219 122 1369 270 107 29 chr20 3617303 3617710 -68536172 + L1MC4 LINE L1 7332 7799 -243 2036 121 3 10 chr20 3617710 3618008 -68535874 + AluSx SINE Alu 1 296 -16 1369 270 107 29 chr20 3618008 3618181 -68535701 + L1MC4 LINE L1 7799 7957 -85 392 228 44 15 chr20 3618284 3618420 -68535462 + L1MC4 LINE L1 7903 8042 0 1960 140 0 23 chr20 3620022 3620330 -68533552 - AluJo SINE Alu -11 301 1 326 247 11 142 chr20 3620330 3620394 -68533488 - MIR SINE MIR -18 244 173 2063 142 3 0 chr20 3620394 3620703 -68533179 - AluSx SINE Alu -2 310 1 326 247 11 142 chr20 3620703 3620828 -68533054 - MIR SINE MIR -89 173 80 242 281 31 0 chr20 3621622 3621686 -68532196 + (CTGGGG)n Simple_repeat Simple_repeat 2 67 0 242 172 78 31 chr20 3623092 3623156 -68530726 + L2 LINE L2 2721 2787 -527 187 263 70 61 chr20 3623528 3623642 -68530240 - L2 LINE L2 -2773 541 427 4048 150 45 42 chr20 3623754 3623890 -68529992 + L1MB4 LINE L1 5022 5156 -1024 1655 142 68 14 chr20 3623890 3624171 -68529711 + AluJo SINE Alu 1 296 -16 2258 93 3 10 chr20 3624172 3624474 -68529408 + AluSc SINE Alu 1 300 -9 4048 150 45 42 chr20 3624474 3625477 -68528405 + L1MB4 LINE L1 5155 6172 -8 21 0 0 0 chr20 3626416 3626437 -68527445 + GC_rich Low_complexity Low_complexity 1 21 0 295 329 32 6 chr20 3627280 3627438 -68526444 + (TTGGGG)n Simple_repeat Simple_repeat 2 163 0 * 298 302 35 18 chr20 3627367 3627536 -68526346 + (TTAGGG)n Simple_repeat Simple_repeat 3 174 0 * 380 249 32 76 chr20 3627487 3627672 -68526210 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 2214 128 0 0 chr20 3628568 3628880 -68525002 - AluSx SINE Alu 0 312 1 1774 149 6 40 chr20 3629061 3629384 -68524498 - AluJo SINE Alu 0 312 1 238 333 94 38 chr20 3629847 3630006 -68523876 + MLT1H LTR MaLR 112 279 -270 2112 115 0 0 chr20 3630332 3630618 -68523264 + AluSx SINE Alu 1 286 -26 1898 130 6 56 chr20 3630680 3631004 -68522878 - AluJb SINE Alu -2 310 3 219 284 75 0 chr20 3631007 3631074 -68522808 - MIR SINE MIR -112 150 79 777 262 68 17 chr20 3631091 3631385 -68522497 - MLT1J LTR MaLR -15 496 188 893 199 0 0 chr20 3631389 3631545 -68522337 + FRAM SINE Alu 8 163 -13 234 303 220 23 chr20 3631556 3631688 -68522194 - MLT1J LTR MaLR -317 194 37 198 347 84 0 chr20 3631958 3632053 -68521829 + MIR SINE MIR 5 107 -155 1267 67 0 0 chr20 3632613 3632777 -68521105 + AluY SINE Alu 136 299 -12 1937 111 44 0 chr20 3632785 3633055 -68520827 + AluSx SINE Alu 3 284 -28 314 273 81 20 chr20 3633481 3633580 -68520302 + HAL1 LINE L1 799 903 -1604 1677 184 0 16 chr20 3633580 3633884 -68519998 + AluJb SINE Alu 1 299 -13 336 279 225 0 chr20 3633895 3634024 -68519858 - MLT1J LTR MaLR -317 194 37 618 180 0 9 chr20 3634041 3634193 -68519689 + AluSg/x SINE Alu 196 310 0 2076 109 0 35 chr20 3634235 3634547 -68519335 - AluSx SINE Alu -7 305 5 741 221 75 42 chr20 3634550 3634763 -68519119 - MIR SINE MIR -41 221 2 297 75 0 0 chr20 3634765 3634805 -68519077 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 718 174 8 15 chr20 3634817 3634917 -68518965 + AluJo/FLAM SINE Alu 2 102 -200 1645 181 0 17 chr20 3634917 3635204 -68518678 - AluJb SINE Alu -30 282 1 718 174 8 15 chr20 3635204 3635235 -68518647 + AluJo/FLAM SINE Alu 102 132 -170 426 250 167 57 chr20 3635238 3635430 -68518452 + HAL1 LINE L1 908 1120 -1387 236 206 134 21 chr20 3635577 3635674 -68518208 + MLT1L LTR MaLR 383 490 -125 247 293 46 63 chr20 3636354 3636417 -68517465 + HAL1b LINE L1 747 810 -538 2028 119 0 0 chr20 3636417 3636724 -68517158 + AluSg SINE Alu 3 309 0 247 293 46 63 chr20 3636724 3636833 -68517049 + HAL1b LINE L1 810 917 -431 304 388 8 15 chr20 3636935 3637069 -68516813 + HAL1 LINE L1 2228 2360 -147 421 142 0 43 chr20 3637069 3637336 -68516546 + AluJb SINE Alu 1 312 0 807 192 36 30 chr20 3637718 3638060 -68515822 + Tigger2 DNA MER2_type 1 2707 -11 267 31 0 0 chr20 3638133 3638165 -68515717 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2154 120 0 0 chr20 3638171 3638471 -68515411 + AluSx SINE Alu 1 300 -12 2094 134 20 64 chr20 3638474 3638629 -68515253 + L1MC2 LINE L1 5182 5342 -1080 1856 122 29 0 chr20 3638629 3638907 -68514975 + AluSx SINE Alu 9 294 -18 2094 134 20 64 chr20 3638907 3639253 -68514629 + L1MC2 LINE L1 5342 5675 -747 1492 171 42 65 chr20 3639254 3639331 -68514551 + AluJo SINE Alu 1 78 -224 2043 130 3 10 chr20 3639331 3639653 -68514229 - AluSx SINE Alu 0 312 1 1492 171 42 65 chr20 3639653 3639884 -68513998 + AluJo SINE Alu 78 302 0 555 141 16 16 chr20 3639893 3640014 -68513868 + GA-rich Low_complexity Low_complexity 4 124 0 2290 143 64 40 chr20 3640029 3640742 -68513140 + L1MC2 LINE L1 5661 6332 -12 812 99 0 0 chr20 3640772 3640883 -68512999 - AluSg/x SINE Alu -14 298 188 1537 111 0 0 chr20 3640883 3641091 -68512791 - AluSx SINE Alu -93 219 12 958 156 6 18 chr20 3641130 3641297 -68512585 + FRAM SINE Alu 1 165 -1 2235 109 3 0 chr20 3641638 3641941 -68511941 + AluSq SINE Alu 1 304 -9 186 43 0 0 chr20 3641970 3641993 -68511889 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 895 192 0 0 chr20 3642005 3642161 -68511721 - AluJb SINE Alu -21 291 136 2296 90 0 0 chr20 3642167 3642466 -68511416 - AluSg SINE Alu -11 299 1 407 265 24 36 chr20 3642833 3642999 -68510883 + L2 LINE L2 2149 2312 -1002 998 307 28 40 chr20 3643009 3643511 -68510371 - MLT1J LTR MaLR -3 508 13 306 329 21 7 chr20 3643933 3644073 -68509809 + L2 LINE L2 2914 3055 -217 317 258 41 10 chr20 3644654 3644751 -68509131 + MIR SINE MIR 92 191 -71 336 234 0 0 chr20 3644884 3644978 -68508904 + (TG)n Simple_repeat Simple_repeat 1 94 0 221 255 94 34 chr20 3645484 3645633 -68508249 - L2 LINE L2 -533 2781 2624 411 290 0 16 chr20 3646363 3646546 -68507336 + (CA)n Simple_repeat Simple_repeat 1 180 0 222 118 0 0 chr20 3646993 3647027 -68506855 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1426 171 15 15 chr20 3647027 3647296 -68506586 - AluJo SINE Alu -32 280 12 217 174 0 22 chr20 3647819 3647865 -68506017 + CT-rich Low_complexity Low_complexity 6 50 0 31 92 0 0 chr20 3647987 3648074 -68505808 + GC_rich Low_complexity Low_complexity 1 87 0 1003 125 0 0 chr20 3649437 3649581 -68504301 + AluJb SINE Alu 146 289 -23 2023 150 7 0 chr20 3650144 3650444 -68503438 - AluJb SINE Alu -10 302 1 207 223 0 0 chr20 3650650 3650703 -68503179 - MIR SINE MIR -63 145 93 2315 102 0 0 chr20 3650868 3651172 -68502710 - AluSq SINE Alu -9 304 1 269 200 67 0 chr20 3651266 3651326 -68502556 + L2 LINE L2 3205 3268 -4 1038 214 19 5 chr20 3651376 3651582 -68502300 + MER63A DNA MER1_type 1 209 -1 759 205 96 12 chr20 3652097 3652147 -68501735 - MER5A DNA MER1_type -6 183 139 1932 88 0 104 chr20 3652147 3652513 -68501369 + AluSx SINE Alu 1 333 0 759 205 96 12 chr20 3652513 3652627 -68501255 - MER5A DNA MER1_type -50 139 4 184 219 38 95 chr20 3652696 3652801 -68501081 + L2 LINE L2 1687 1785 -1529 417 177 0 0 chr20 3652813 3652875 -68501007 + AluJ/FRAM SINE Alu 231 292 -20 2255 103 0 0 chr20 3653127 3653428 -68500454 + AluSx SINE Alu 1 301 -11 384 263 163 37 chr20 3653564 3653754 -68500128 + L2 LINE L2 3085 3298 -15 442 256 88 37 chr20 3653758 3653973 -68499909 + L1MC5 LINE L1 7558 7783 -178 198 118 0 0 chr20 3654239 3654273 -68499609 + (TG)n Simple_repeat Simple_repeat 1 34 0 1986 145 0 3 chr20 3656756 3657053 -68496829 + AluSx SINE Alu 1 296 -16 1314 120 0 0 chr20 3658095 3658278 -68495604 - AluSg/x SINE Alu -3 307 125 2123 91 3 42 chr20 3658282 3658591 -68495291 - AluY SINE Alu -14 297 1 1847 131 13 55 chr20 3658591 3658903 -68494979 - AluJo SINE Alu -13 299 1 435 235 149 60 chr20 3658934 3659249 -68494633 - L1ME4a LINE L1 -162 5959 5617 247 208 0 0 chr20 3659282 3659335 -68494547 + A-rich Low_complexity Low_complexity 1 53 0 420 308 202 22 chr20 3659892 3660259 -68493623 + L2 LINE L2 2532 2964 -350 204 333 9 27 chr20 3660647 3660758 -68493124 + G-rich Low_complexity Low_complexity 5 113 0 1027 193 104 73 chr20 3661662 3661706 -68492176 - LTR16A1 LTR ERVL 0 457 416 2584 33 7 0 chr20 3661706 3662008 -68491874 - AluY SINE Alu -7 304 1 1027 193 104 73 chr20 3662008 3662347 -68491535 - LTR16A1 LTR ERVL -41 416 62 412 317 42 24 chr20 3666489 3666656 -68487226 + MIR SINE MIR 82 251 -11 355 257 22 37 chr20 3668295 3668431 -68485451 + MIR3 SINE MIR 10 143 -65 255 318 145 0 chr20 3672104 3672283 -68481599 + L1ME4a LINE L1 5613 5817 -304 198 0 0 0 chr20 3672433 3672455 -68481427 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2184 88 7 3 chr20 3672475 3672769 -68481113 + AluSc SINE Alu 1 295 -14 308 272 68 0 chr20 3672770 3672873 -68481009 + L1ME4a LINE L1 5974 6083 -38 1480 117 14 0 chr20 3673034 3673248 -68480634 - AluSg/x SINE Alu -9 301 85 343 282 188 0 chr20 3673532 3673681 -68480201 - MIR SINE MIR -57 205 29 180 352 63 19 chr20 3674299 3674458 -68479424 - MIR3 SINE MIR -24 184 19 228 111 0 0 chr20 3675360 3675396 -68478486 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 341 16 8 chr20 3676261 3676390 -68477492 + L1MC4a LINE L1 6873 7002 -806 401 296 63 12 chr20 3676453 3676701 -68477181 + L1MC4a LINE L1 7005 7228 -620 2301 108 0 0 chr20 3676737 3677042 -68476840 - AluSq SINE Alu -8 305 1 439 263 33 19 chr20 3677156 3677352 -68476530 + L1MC5 LINE L1 7268 7492 -522 198 0 0 0 chr20 3677364 3677386 -68476496 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1999 116 48 0 chr20 3677412 3677706 -68476176 + AluSg SINE Alu 1 308 -2 1493 142 124 8 chr20 3677790 3678057 -68475825 - AluJb SINE Alu -13 299 2 633 179 69 58 chr20 3678064 3678237 -68475645 + MER58B DNA MER1_type 167 341 0 2412 80 0 0 chr20 3678381 3678682 -68475200 + AluSx SINE Alu 2 302 -10 2334 63 7 3 chr20 3678682 3678983 -68474899 + AluSp SINE Alu 1 302 -11 328 273 141 16 chr20 3678998 3679119 -68474763 + L1MC5 LINE L1 7609 7744 -217 450 329 136 30 chr20 3679778 3680146 -68473736 + L2 LINE L2 2864 3270 -2 420 279 71 7 chr20 3680764 3680904 -68472978 + MIR SINE MIR 25 173 -89 189 273 0 65 chr20 3682673 3682750 -68471132 - MIR SINE MIR -76 132 61 301 335 47 16 chr20 3684478 3684669 -68469213 + Charlie8 DNA MER1_type 4 200 -2217 1985 105 0 34 chr20 3684868 3685183 -68468699 - AluSx SINE Alu 0 305 1 248 259 111 0 chr20 3685304 3685385 -68468497 - L2 LINE L2 -5 3267 3178 2520 53 0 0 chr20 3685834 3686135 -68467747 + AluY SINE Alu 1 301 -10 804 167 0 36 chr20 3686222 3686360 -68467522 - FLAM_C SINE Alu 0 133 1 1044 168 0 0 chr20 3686458 3686619 -68467263 - FRAM SINE Alu -5 161 1 1391 202 3 63 chr20 3686630 3686947 -68466935 - AluSx SINE Alu -4 298 1 578 231 1 0 chr20 3686949 3687086 -68466796 - L1ME LINE L1 -551 5611 5474 261 0 0 0 chr20 3687224 3687253 -68466629 + (CA)n Simple_repeat Simple_repeat 2 30 0 1463 123 0 5 chr20 3687253 3687473 -68466409 + AluSg/x SINE Alu 93 311 -1 720 223 32 40 chr20 3687476 3687727 -68466155 + L1MC4a LINE L1 5589 5837 -1971 1240 149 0 0 chr20 3687728 3687909 -68465973 - AluSx SINE Alu -131 181 1 928 242 65 87 chr20 3687925 3688360 -68465522 - MLT2B3 LTR ERVL 0 554 128 2280 104 0 0 chr20 3688360 3688668 -68465214 - AluSx SINE Alu -4 308 1 928 242 65 87 chr20 3688668 3688694 -68465188 - MLT2B3 LTR ERVL -426 128 103 1641 171 38 3 chr20 3688695 3688987 -68464895 + AluSx SINE Alu 1 302 -10 232 374 146 0 chr20 3689170 3689293 -68464589 + L2 LINE L2 3132 3272 0 1588 183 0 64 chr20 3689342 3689494 -68464388 + AluJb SINE Alu 1 124 -188 2048 120 10 0 chr20 3689494 3689785 -68464097 + AluSx SINE Alu 3 296 -16 1588 183 0 64 chr20 3689785 3689944 -68463938 + AluJb SINE Alu 124 292 -20 2282 113 0 0 chr20 3689953 3690263 -68463619 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3690263 3690284 -68463598 + AT_rich Low_complexity Low_complexity 1 21 0 701 204 17 28 chr20 3690284 3690467 -68463415 - MLT1E LTR MaLR -381 186 1 25 51 0 0 chr20 3690686 3690725 -68463157 + AT_rich Low_complexity Low_complexity 1 39 0 1269 250 31 34 chr20 3691269 3691621 -68462261 + MLT1E LTR MaLR 243 593 0 2090 133 3 3 chr20 3691664 3691972 -68461910 + AluSx SINE Alu 1 308 -4 246 205 0 162 chr20 3691972 3692089 -68461793 - L1ME LINE L1 -460 5710 5613 2012 119 10 3 chr20 3692090 3692384 -68461498 - AluSq SINE Alu -17 296 1 25 31 0 0 chr20 3693586 3693618 -68460264 + GC_rich Low_complexity Low_complexity 1 32 0 2223 97 13 3 chr20 3695468 3695768 -68458114 + AluSx SINE Alu 7 309 -3 315 0 0 0 chr20 3695823 3695858 -68458024 + (CA)n Simple_repeat Simple_repeat 1 35 0 207 254 68 0 chr20 3697360 3697419 -68456463 + MIR SINE MIR 88 150 -112 2130 111 6 16 chr20 3697492 3697807 -68456075 + AluSx SINE Alu 1 312 0 206 255 235 10 chr20 3697907 3698009 -68455873 + MIR SINE MIR 76 200 -62 243 177 0 0 chr20 3700277 3700339 -68453543 + (CAT)n Simple_repeat Simple_repeat 3 64 0 711 179 0 0 chr20 3700536 3700681 -68453201 + CT-rich Low_complexity Low_complexity 2 146 0 42 0 0 0 chr20 3701890 3701932 -68451950 + GC_rich Low_complexity Low_complexity 1 42 0 1840 154 13 19 chr20 3703306 3703618 -68450264 - AluJb SINE Alu 0 312 3 1914 138 0 40 chr20 3704080 3704405 -68449477 + AluSx SINE Alu 1 312 0 270 0 0 0 chr20 3706943 3706973 -68446909 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 405 0 0 0 chr20 3706972 3707017 -68446865 + (CA)n Simple_repeat Simple_repeat 1 45 0 1875 48 0 52 chr20 3707993 3708244 -68445638 + AluY SINE Alu 37 274 -37 315 0 0 0 chr20 3708244 3708279 -68445603 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 276 109 16 62 chr20 3710498 3710562 -68443320 - MER45 DNA AcHobo -56 122 62 22 0 0 0 chr20 3710984 3711006 -68442876 + GC_rich Low_complexity Low_complexity 1 22 0 1926 160 0 3 chr20 3713103 3713396 -68440486 + AluJb SINE Alu 1 292 -20 324 243 141 40 chr20 3713399 3713425 -68440457 + L2 LINE L2 1689 1711 -1603 2249 92 0 23 chr20 3713425 3713730 -68440152 + AluSc SINE Alu 1 298 -11 324 243 141 40 chr20 3713730 3713880 -68440002 + L2 LINE L2 1711 1883 -1431 722 150 0 30 chr20 3713934 3714067 -68439815 + FLAM_A SINE Alu 2 130 -3 1331 167 36 113 chr20 3714266 3714601 -68439281 - AluJb SINE Alu -3 309 1 2027 80 8 0 chr20 3714603 3714854 -68439028 - AluY SINE Alu -8 303 51 350 103 35 0 chr20 3714854 3714912 -68438970 - AluSq/x SINE Alu -158 145 86 1328 156 5 22 chr20 3714912 3715136 -68438746 - AluJo SINE Alu -92 220 1 812 234 16 5 chr20 3715139 3715327 -68438555 - AluJb SINE Alu 0 312 123 1359 172 0 29 chr20 3715739 3715983 -68437899 - AluJo SINE Alu -17 295 59 25 0 0 0 chr20 3717235 3717260 -68436622 + AT_rich Low_complexity Low_complexity 1 25 0 2460 94 0 0 chr20 3717639 3717947 -68435935 - AluSg SINE Alu -1 309 2 2466 87 0 3 chr20 3717948 3718257 -68435625 - AluSx SINE Alu -4 308 1 1557 170 62 4 chr20 3718391 3718667 -68435215 + AluJb SINE Alu 1 292 -20 1167 152 6 6 chr20 3718673 3718851 -68435031 + FRAM SINE Alu 1 175 -1 1984 139 6 29 chr20 3718851 3719167 -68434715 + AluSx SINE Alu 1 309 -3 341 200 13 27 chr20 3719285 3719360 -68434522 + MLT1K LTR MaLR 156 229 -359 22 0 0 0 chr20 3721053 3721075 -68432807 + AT_rich Low_complexity Low_complexity 1 22 0 748 153 0 0 chr20 3724704 3724822 -68429060 + AluJo/FLAM SINE Alu 1 118 -184 2354 98 3 13 chr20 3724822 3725138 -68428744 + AluSp SINE Alu 1 313 0 2433 105 0 0 chr20 3725735 3726041 -68427841 - AluSx SINE Alu -6 306 1 483 286 8 8 chr20 3726044 3726177 -68427705 + LTR16C LTR ERVL 346 478 -13 984 155 0 0 chr20 3728031 3728173 -68425709 + FRAM SINE Alu 4 145 -31 205 317 72 56 chr20 3728216 3728396 -68425486 - L2 LINE L2 -831 2483 2301 522 211 49 49 chr20 3728548 3728690 -68425192 + FLAM_A SINE Alu 1 142 0 1948 167 3 3 chr20 3728892 3729203 -68424679 + AluJb SINE Alu 1 311 -1 2317 98 0 16 chr20 3729205 3729373 -68424509 - AluSx SINE Alu -11 301 139 2121 104 3 79 chr20 3729373 3729691 -68424191 - AluSq SINE Alu -19 294 1 2317 98 0 16 chr20 3729691 3729828 -68424054 - AluSx SINE Alu -173 139 1 263 366 14 7 chr20 3730258 3730400 -68423482 + MLT1L LTR MaLR 341 483 -132 325 316 70 37 chr20 3730485 3730672 -68423210 + L2 LINE L2 2849 3041 -231 2800 13 0 0 chr20 3731720 3732019 -68421863 + AluYb8 SINE Alu 1 299 -19 2113 142 0 7 chr20 3732291 3732594 -68421288 - AluSx SINE Alu -11 301 1 1756 172 21 3 chr20 3732714 3732999 -68420883 - AluJb SINE Alu -22 290 1 2374 98 3 0 chr20 3733001 3733012 -68420870 - AluSg SINE Alu -3 307 298 198 0 0 0 chr20 3733012 3733034 -68420848 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2374 98 3 0 chr20 3733034 3733328 -68420554 - AluSg SINE Alu -12 298 1 2412 89 7 0 chr20 3733908 3734211 -68419671 - AluSq SINE Alu -8 305 1 2593 78 0 0 chr20 3734628 3734936 -68418946 - AluY SINE Alu -3 308 1 523 279 75 10 chr20 3735135 3735336 -68418546 + MIR SINE MIR 3 216 -46 925 191 36 21 chr20 3735336 3735530 -68418352 + MER3 DNA MER1_type 1 197 -12 2374 95 0 0 chr20 3736236 3736530 -68417352 - AluSc SINE Alu -15 294 1 498 251 21 37 chr20 3736548 3736735 -68417147 - L1MC4 LINE L1 -94 7948 7765 406 188 180 23 chr20 3736742 3736870 -68417012 + MER5A DNA MER1_type 39 186 -3 2466 73 0 32 chr20 3736945 3737260 -68416622 + AluSx SINE Alu 1 305 -7 2421 92 0 7 chr20 3737337 3737642 -68416240 - AluSq SINE Alu -10 303 1 2544 239 48 56 chr20 3737653 3738128 -68415754 - L1MC4 LINE L1 -262 7627 7149 2393 77 0 22 chr20 3738128 3738439 -68415443 - AluY SINE Alu -7 304 1 2544 239 48 56 chr20 3738439 3738518 -68415364 - L1MC4 LINE L1 -740 7149 7071 2366 101 3 0 chr20 3738518 3738814 -68415068 - AluSp SINE Alu -16 297 1 2544 239 48 56 chr20 3738814 3739251 -68414631 - L1MC4 LINE L1 -818 7071 6555 1861 141 0 0 chr20 3739251 3739513 -68414369 + AluSx SINE Alu 37 298 -14 2544 239 48 56 chr20 3739513 3739578 -68414304 - L1MC4 LINE L1 -1334 6555 6491 367 233 133 52 chr20 3739589 3739680 -68414202 - L1MC4a LINE L1 -1476 6332 6250 2354 98 0 19 chr20 3739680 3739997 -68413885 - AluSq SINE Alu -2 311 1 2251 110 3 0 chr20 3739999 3740289 -68413593 - AluSg SINE Alu -19 291 1 367 233 133 52 chr20 3740289 3740404 -68413478 - L1MC4a LINE L1 -1558 6250 6106 2207 97 13 26 chr20 3740560 3740869 -68413013 - AluY SINE Alu -6 305 1 1426 178 55 31 chr20 3740871 3741163 -68412719 - AluJo SINE Alu -13 299 1 2585 40 0 13 chr20 3741335 3741634 -68412248 + AluY SINE Alu 1 295 -16 740 167 24 0 chr20 3741670 3741796 -68412086 - FLAM_C SINE Alu -4 129 1 1019 129 0 29 chr20 3741799 3741969 -68411913 - FRAM SINE Alu -1 165 1 2395 100 0 0 chr20 3742475 3742775 -68411107 - AluSx SINE Alu -12 300 1 2304 110 10 0 chr20 3743271 3743581 -68410301 - AluSp SINE Alu 0 313 1 731 221 136 34 chr20 3743585 3743938 -68409944 - L1MC5 LINE L1 -36 7925 7537 1554 132 0 17 chr20 3743956 3744191 -68409691 - AluJb SINE Alu -81 231 1 360 201 132 14 chr20 3744316 3744460 -68409422 - HAL1b LINE L1 -509 839 679 2259 98 3 29 chr20 3744476 3744791 -68409091 - AluSp SINE Alu -4 309 3 2344 151 34 14 chr20 3745006 3745424 -68408458 - MSTB LTR MaLR 0 426 1 2249 129 0 0 chr20 3745796 3746105 -68407777 - AluSx SINE Alu -3 309 1 371 318 13 33 chr20 3746145 3746296 -68407586 + MIR SINE MIR 7 154 -108 261 350 60 26 chr20 3748749 3748983 -68404899 + L2 LINE L2 1759 2000 -1314 413 315 56 53 chr20 3749045 3749347 -68404535 + L2 LINE L2 2244 2546 -768 2350 108 0 0 chr20 3750101 3750396 -68403486 + AluSg SINE Alu 1 295 -15 220 351 77 50 chr20 3751272 3751494 -68402388 - MIR SINE MIR -4 258 31 394 228 61 61 chr20 3751614 3751728 -68402154 - MARNA DNA Mariner -207 379 266 2236 96 0 7 chr20 3751963 3752245 -68401637 + AluSp SINE Alu 21 300 -13 1735 161 18 7 chr20 3752291 3752577 -68401305 - AluJo SINE Alu -23 289 1 239 204 32 32 chr20 3752587 3752680 -68401202 - HAL1b LINE L1 -575 773 681 2261 108 0 14 chr20 3752695 3752991 -68400891 - AluSx SINE Alu -20 292 1 1427 277 68 15 chr20 3754017 3754674 -68399208 + L2 LINE L2 2521 3202 -111 2166 122 0 3 chr20 3755836 3756132 -68397750 - AluJb SINE Alu -5 307 13 1059 183 95 0 chr20 3756493 3756522 -68397360 - L1MD2 LINE L1 -177 6182 6157 222 37 0 0 chr20 3756522 3756549 -68397333 + (TG)n Simple_repeat Simple_repeat 2 28 0 1059 183 95 0 chr20 3756549 3756760 -68397122 - L1MD2 LINE L1 -202 6157 5919 776 145 8 0 chr20 3756928 3757052 -68396830 + FLAM_C SINE Alu 2 126 -7 2418 94 0 0 chr20 3757061 3757358 -68396524 + AluSx SINE Alu 3 299 -13 2377 115 0 3 chr20 3757359 3757672 -68396210 + AluSx SINE Alu 1 312 0 2332 94 3 3 chr20 3759830 3760128 -68393754 + AluSp SINE Alu 1 298 -15 429 269 117 0 chr20 3760574 3760719 -68393163 + L2 LINE L2 2911 3072 -241 1378 235 7 7 chr20 3760734 3760859 -68393023 + AluJo SINE Alu 7 131 -181 685 82 0 0 chr20 3760859 3760957 -68392925 + L1PA4 LINE L1 6054 6151 -4 1378 235 7 7 chr20 3760957 3761125 -68392757 + AluJo SINE Alu 130 300 -12 1903 161 26 0 chr20 3761170 3761474 -68392408 - AluJb SINE Alu 0 312 1 597 259 78 21 chr20 3761478 3761671 -68392211 + L2 LINE L2 3107 3310 -3 431 308 0 17 chr20 3761935 3762136 -68391746 + MIR SINE MIR 13 260 -2 2474 90 0 0 chr20 3762450 3762751 -68391131 - AluSx SINE Alu -11 301 1 2391 66 3 3 chr20 3763000 3763304 -68390578 - AluSc SINE Alu -5 304 1 2114 105 0 3 chr20 3763665 3763960 -68389922 - AluSx SINE Alu -16 296 3 2151 106 3 0 chr20 3764147 3764447 -68389435 + AluSx SINE Alu 1 301 -11 1795 117 19 62 chr20 3764447 3764754 -68389128 + AluSx SINE Alu 1 294 -18 1718 74 0 4 chr20 3764753 3764982 -68388900 + AluSg/x SINE Alu 82 309 -3 * 2124 87 49 0 chr20 3765065 3765353 -68388529 + AluSx SINE Alu 1 302 -10 2378 54 0 14 chr20 3766536 3766831 -68387051 - AluY SINE Alu -20 291 1 2081 102 3 23 chr20 3766836 3767141 -68386741 - AluSx SINE Alu -13 299 1 564 189 90 0 chr20 3767816 3767927 -68385955 + AluJb SINE Alu 158 278 -34 1654 188 3 13 chr20 3768040 3768343 -68385539 - AluJo SINE Alu -12 300 1 1500 143 91 8 chr20 3770012 3770277 -68383605 - AluJo SINE Alu -20 292 6 3130 220 27 48 chr20 3770330 3770570 -68383312 - L1M4 LINE L1 -884 5262 5018 2036 101 0 0 chr20 3770570 3770846 -68383036 - AluSg SINE Alu -11 299 24 3130 220 27 48 chr20 3770846 3770967 -68382915 - L1M4 LINE L1 -1128 5018 4896 1830 124 10 26 chr20 3770967 3771274 -68382608 - AluSq SINE Alu -11 302 1 3130 220 27 48 chr20 3771274 3771564 -68382318 - L1M4 LINE L1 -1250 4896 4632 1862 159 0 7 chr20 3771564 3771865 -68382017 - AluSx SINE Alu -12 300 2 3130 220 27 48 chr20 3771865 3772114 -68381768 - L1M4 LINE L1 -1514 4632 4379 837 189 6 18 chr20 3772114 3772283 -68381599 - AluJb SINE Alu -15 297 131 317 54 0 0 chr20 3772303 3772392 -68381490 + Alu SINE Alu 243 331 0 716 133 88 0 chr20 3772392 3772505 -68381377 - AluJb SINE Alu -188 124 2 345 179 0 0 chr20 3772507 3772574 -68381308 - L1M4 LINE L1 -1763 4383 4317 970 193 0 0 chr20 3772670 3772841 -68381041 - AluJo/FRAM SINE Alu -5 307 137 2251 107 0 0 chr20 3772841 3773150 -68380732 - AluSq SINE Alu -4 309 1 186 43 0 0 chr20 3773599 3773622 -68380260 + (TA)n Simple_repeat Simple_repeat 1 23 0 1863 129 21 0 chr20 3773622 3773901 -68379981 - AluSx SINE Alu -27 285 1 1359 152 104 11 chr20 3773913 3774182 -68379700 - L1MA6 LINE L1 0 6300 6007 1050 205 40 29 chr20 3774224 3774502 -68379380 + L1ME1 LINE L1 5768 6048 -118 2317 73 0 13 chr20 3774619 3774920 -68378962 + AluY SINE Alu 1 297 -14 31 68 0 0 chr20 3775006 3775065 -68378817 + AT_rich Low_complexity Low_complexity 1 59 0 372 304 67 41 chr20 3778093 3778287 -68375595 - MIR SINE MIR -33 229 31 198 0 0 0 chr20 3779630 3779652 -68374230 + (A)n Simple_repeat Simple_repeat 1 22 0 412 228 41 41 chr20 3779847 3779992 -68373890 - L1ME3A LINE L1 -219 5951 5807 2224 96 0 3 chr20 3780005 3780307 -68373575 - AluSx SINE Alu -11 301 1 937 156 0 12 chr20 3780358 3780518 -68373364 + AluSx SINE Alu 1 158 -154 788 180 49 22 chr20 3780541 3780724 -68373158 - MLT1A2 LTR MaLR -179 195 8 277 269 65 87 chr20 3780732 3781007 -68372875 - L1ME3A LINE L1 -1419 4727 4459 537 152 22 0 chr20 3781007 3781099 -68372783 + MLT1A2 LTR MaLR 281 374 0 711 274 151 12 chr20 3781153 3781576 -68372306 + L1ME3A LINE L1 4801 5282 -864 1961 123 17 0 chr20 3781576 3781869 -68372013 + AluSp SINE Alu 1 298 -15 884 99 12 25 chr20 3781893 3782055 -68371827 + (GAAA)n Simple_repeat Simple_repeat 4 163 0 2209 104 0 0 chr20 3782066 3782364 -68371518 + AluSx SINE Alu 1 298 -14 937 245 95 89 chr20 3782366 3782811 -68371071 + L1ME3A LINE L1 5280 5721 -449 1512 144 59 0 chr20 3782811 3783067 -68370815 - AluJo SINE Alu -19 293 23 937 245 95 89 chr20 3783067 3783087 -68370795 + L1ME3A LINE L1 5721 5739 -431 743 191 0 8 chr20 3783087 3783213 -68370669 - FLAM_A SINE Alu -8 125 1 937 245 95 89 chr20 3783213 3783400 -68370482 + L1ME3A LINE L1 5739 5937 -233 2294 88 7 0 chr20 3783643 3783951 -68369931 - AluSp SINE Alu -3 310 1 495 188 91 91 chr20 3784261 3784437 -68369445 + MER69A DNA AcHobo 2 177 0 521 234 0 9 chr20 3785272 3785383 -68368499 + MLT1-int LTR MaLR 772 881 -490 736 216 102 131 chr20 3785469 3785979 -68367903 + MLT1-int LTR MaLR 877 1371 0 1594 217 73 18 chr20 3786008 3786390 -68367492 + MLT1E2 LTR MaLR 215 617 -9 323 239 35 20 chr20 3787996 3788129 -68365753 + MIR SINE MIR 23 146 -62 1933 139 0 0 chr20 3788551 3788838 -68365044 - AluSx SINE Alu -5 307 21 1345 139 9 5 chr20 3788838 3789045 -68364837 + AluJb SINE Alu 93 303 -9 333 229 24 109 chr20 3789204 3789270 -68364612 - L1MC/D LINE L1 -795 5351 5450 2231 97 0 0 chr20 3789270 3789560 -68364322 - AluSx SINE Alu -22 290 1 333 229 24 109 chr20 3789560 3789750 -68364132 - L1MC/D LINE L1 -695 5451 5246 413 152 0 13 chr20 3789762 3789841 -68364041 - AluJ/FRAM SINE Alu -8 304 227 1650 144 62 17 chr20 3790345 3790458 -68363424 + AluJo SINE Alu 6 112 -200 2219 114 0 13 chr20 3790458 3790774 -68363108 + AluSx SINE Alu 1 312 0 1650 144 62 17 chr20 3790774 3790951 -68362931 + AluJo SINE Alu 112 309 -3 205 373 91 18 chr20 3791739 3791849 -68362033 - L2 LINE L2 -16 3256 3139 2158 153 18 0 chr20 3792863 3793204 -68360678 - MER7A DNA MER2_type -1 345 1 1185 164 17 30 chr20 3793228 3793459 -68360423 - AluJo SINE Alu -10 302 75 2145 124 3 0 chr20 3794936 3795242 -68358640 - AluSx SINE Alu -5 307 1 186 305 73 0 chr20 3795543 3795625 -68358257 - MIR SINE MIR -128 134 47 1687 158 0 51 chr20 3798111 3798427 -68355455 + AluJb SINE Alu 1 300 -12 925 118 71 164 chr20 3798846 3799084 -68354798 - MER20 DNA MER1_type -3 216 1 366 343 87 17 chr20 3799266 3799438 -68354444 - MIR3 SINE MIR -16 192 9 2075 109 0 23 chr20 3799845 3800148 -68353734 - AluSg SINE Alu -14 296 1 263 135 19 0 chr20 3800487 3800525 -68353357 + (CA)n Simple_repeat Simple_repeat 2 43 -11 2231 109 0 0 chr20 3800525 3800829 -68353053 - AluSx SINE Alu -6 306 3 263 135 19 0 chr20 3800829 3800842 -68353040 + (CA)n Simple_repeat Simple_repeat 43 54 0 1505 163 43 4 chr20 3800842 3801118 -68352764 - AluJb SINE Alu -25 287 1 299 323 31 10 chr20 3801247 3801343 -68352539 - MER5A DNA MER1_type -52 137 40 1576 166 34 7 chr20 3801906 3802201 -68351681 - AluJo SINE Alu -8 304 2 2236 97 3 0 chr20 3802453 3802752 -68351130 - AluSx SINE Alu -12 300 1 22 0 0 0 chr20 3802920 3802942 -68350940 + AT_rich Low_complexity Low_complexity 1 22 0 1997 140 0 0 chr20 3803335 3803635 -68350247 - AluSx SINE Alu -12 300 1 1881 145 0 32 chr20 3804115 3804425 -68349457 - AluSx SINE Alu -12 300 1 512 100 12 0 chr20 3804519 3804599 -68349283 + (TG)n Simple_repeat Simple_repeat 1 81 0 435 296 66 38 chr20 3805794 3806007 -68347875 + L2 LINE L2 2181 2399 -915 2285 143 117 29 chr20 3806007 3806453 -68347429 - L1MC1 LINE L1 -434 5899 5415 239 303 192 0 chr20 3806570 3806669 -68347213 + L2 LINE L2 3155 3272 0 3410 161 13 75 chr20 3806841 3807136 -68346746 - L1MDb LINE L1 -4471 2069 1758 2377 82 0 0 chr20 3807136 3807440 -68346442 + AluSq SINE Alu 1 304 -9 3410 161 13 75 chr20 3807440 3807502 -68346380 - L1MDb LINE L1 -4782 1758 1694 2066 130 0 0 chr20 3807502 3807794 -68346088 + AluSx SINE Alu 1 292 -20 3410 161 13 75 chr20 3807794 3808215 -68345667 - L1MDb LINE L1 -4846 1694 1249 1927 111 31 7 chr20 3808215 3808504 -68345378 - AluSq SINE Alu -17 296 1 3410 161 13 75 chr20 3808504 3808532 -68345350 - L1MDb LINE L1 -5291 1249 1314 2370 78 3 0 chr20 3808532 3808840 -68345042 - AluY SINE Alu -2 309 1 3410 161 13 75 chr20 3808840 3808927 -68344955 - L1MDb LINE L1 -5225 1315 1224 1445 113 0 74 chr20 3808927 3809183 -68344699 - AluY SINE Alu -14 297 61 621 147 140 7 chr20 3809187 3809323 -68344559 - L1MDb LINE L1 -5342 1198 1045 * 3863 204 72 45 chr20 3809319 3810310 -68343572 - L1MCb LINE L1 -4196 2368 1307 2341 82 0 3 chr20 3810310 3810615 -68343267 - AluSq SINE Alu -9 304 1 3863 204 72 45 chr20 3810615 3811413 -68342469 - L1MCb LINE L1 -5257 1307 532 1011 161 0 0 chr20 3811415 3811577 -68342305 + AluJb SINE Alu 147 308 -4 183 277 218 0 chr20 3812722 3812823 -68341059 + L2 LINE L2 1397 1519 -1795 378 218 69 90 chr20 3812824 3813012 -68340870 + L2 LINE L2 1812 1995 -1319 634 321 156 27 chr20 3813142 3813450 -68340432 + L2 LINE L2 2362 2629 -685 2186 44 0 0 chr20 3813450 3813699 -68340183 - AluY SINE Alu -23 288 40 634 321 156 27 chr20 3813699 3813910 -68339972 + L2 LINE L2 2629 2948 -366 235 292 82 62 chr20 3813987 3814182 -68339700 + L2 LINE L2 3105 3303 -10 512 243 21 0 chr20 3814627 3814767 -68339115 - L1 LINE L1 -898 5248 5106 2153 95 57 0 chr20 3814825 3815108 -68338774 - AluSp SINE Alu -14 299 1 22 0 0 0 chr20 3815136 3815158 -68338724 + AT_rich Low_complexity Low_complexity 1 22 0 303 93 0 0 chr20 3815502 3815545 -68338337 + (TG)n Simple_repeat Simple_repeat 1 43 0 214 261 0 0 chr20 3815646 3815711 -68338171 + A-rich Low_complexity Low_complexity 1 65 0 627 270 176 32 chr20 3816033 3816242 -68337640 - L1ME4a LINE L1 0 6121 5943 519 17 0 0 chr20 3816242 3816302 -68337580 + (CA)n Simple_repeat Simple_repeat 2 61 0 627 270 176 32 chr20 3816302 3816656 -68337226 - L1ME4a LINE L1 -178 5943 5330 1722 139 4 4 chr20 3816679 3816931 -68336951 - AluSq SINE Alu -12 301 50 561 271 101 0 chr20 3816987 3817186 -68336696 - MIR SINE MIR -1 261 43 261 294 134 35 chr20 3817196 3817509 -68336373 + L1MC4a LINE L1 4943 5286 -860 715 46 0 0 chr20 3817517 3817604 -68336278 + AluSc SINE Alu 202 288 -21 2451 225 73 53 chr20 3817662 3818484 -68335398 + L1MC4a LINE L1 5310 6147 -1661 1389 250 21 114 chr20 3818489 3819152 -68334730 + L1M4 LINE L1 1451 2174 -4651 319 77 0 0 chr20 3819152 3819191 -68334691 - U2 snRNA snRNA -149 39 1 1389 250 21 114 chr20 3819191 3819307 -68334575 + L1M4 LINE L1 2174 2343 -4482 2094 100 21 0 chr20 3819307 3819586 -68334296 + AluSx SINE Alu 1 285 -27 1389 250 21 114 chr20 3819586 3819606 -68334276 + L1M4 LINE L1 2343 2363 -4462 33 25 0 0 chr20 3820108 3820148 -68333734 + AT_rich Low_complexity Low_complexity 1 40 0 1236 199 151 19 chr20 3820417 3820729 -68333153 + L1MB8 LINE L1 5825 6177 -1 1493 165 0 89 chr20 3820733 3821048 -68332834 + AluJb SINE Alu 1 287 -25 182 204 136 0 chr20 3821570 3821614 -68332268 + L2 LINE L2 3212 3261 -11 471 60 0 0 chr20 3821786 3821853 -68332029 + (CA)n Simple_repeat Simple_repeat 2 68 0 907 113 8 0 chr20 3821859 3821983 -68331899 + AluJb SINE Alu 1 125 -187 1200 218 5 101 chr20 3822162 3822548 -68331334 + L1MC5 LINE L1 6615 6963 -998 209 135 27 0 chr20 3822548 3822585 -68331297 + (TA)n Simple_repeat Simple_repeat 1 38 0 871 219 36 86 chr20 3822628 3822872 -68331010 + L1MC5 LINE L1 7185 7407 -554 1849 142 35 3 chr20 3822872 3823161 -68330721 + AluSq SINE Alu 1 298 -15 871 219 36 86 chr20 3823161 3823277 -68330605 + L1MC5 LINE L1 7407 7527 -434 264 224 0 0 chr20 3823496 3823576 -68330306 - AluJ/monomer SINE Alu 0 314 235 1091 104 0 14 chr20 3823576 3823720 -68330162 - AluSq/x SINE Alu -170 142 1 488 265 100 9 chr20 3824211 3824389 -68329493 + MIR SINE MIR 40 230 -32 282 119 0 85 chr20 3824447 3824506 -68329376 + L1MC5 LINE L1 6907 6960 -1001 266 132 19 0 chr20 3824508 3824561 -68329321 + (TA)n Simple_repeat Simple_repeat 1 54 0 219 314 118 0 chr20 3824596 3824698 -68329184 - MIR SINE MIR -56 206 93 365 160 56 0 chr20 3824701 3824826 -68329056 + (TA)n Simple_repeat Simple_repeat 2 133 0 1388 172 76 8 chr20 3825025 3825287 -68328595 + AluJb SINE Alu 1 280 -32 263 322 35 0 chr20 3825751 3825838 -68328044 - MIR SINE MIR -114 148 59 2141 125 10 0 chr20 3826954 3827250 -68326632 + AluSx SINE Alu 1 299 -13 469 286 71 36 chr20 3827260 3827540 -68326342 - L1M4 LINE L1 -2201 3945 3656 2106 101 25 0 chr20 3827689 3827965 -68325917 - AluSx SINE Alu -15 297 15 2117 103 3 3 chr20 3828851 3829158 -68324724 + AluSx SINE Alu 1 307 0 200 148 0 66 chr20 3829292 3829353 -68324529 + (TTTTTA)n Simple_repeat Simple_repeat 2 58 0 604 129 0 69 chr20 3829357 3829458 -68324424 - AluSp/q SINE Alu -17 296 203 1354 157 14 5 chr20 3829458 3829674 -68324208 + AluJo SINE Alu 71 288 -24 29 0 0 0 chr20 3829674 3829703 -68324179 + AT_rich Low_complexity Low_complexity 1 29 0 373 241 88 122 chr20 3829703 3829950 -68323932 - HAL1b LINE L1 -840 508 271 2095 128 0 7 chr20 3829950 3830247 -68323635 - AluSx SINE Alu -17 295 1 373 241 88 122 chr20 3830247 3830294 -68323588 - HAL1b LINE L1 -1077 271 224 611 261 13 7 chr20 3830338 3830491 -68323391 + L1MC4 LINE L1 6701 6854 -1188 839 216 28 0 chr20 3830618 3830794 -68323088 + MER58A DNA MER1_type 42 222 -2 323 254 8 75 chr20 3831561 3831695 -68322187 - HAL1 LINE L1 -4 2503 2379 855 94 0 0 chr20 3831697 3831803 -68322079 + U6 snRNA snRNA 1 106 -1 21 0 0 0 chr20 3831804 3831825 -68322057 + AT_rich Low_complexity Low_complexity 1 21 0 441 248 99 0 chr20 3831825 3831986 -68321896 - HAL1 LINE L1 -115 2392 2216 534 193 0 0 chr20 3831994 3832077 -68321805 - AluJ/FLAM SINE Alu -228 84 2 317 299 84 26 chr20 3834014 3834168 -68319714 - HAL1 LINE L1 -345 2162 2000 740 172 147 73 chr20 3834210 3834414 -68319468 - MER20 DNA MER1_type 0 219 1 333 218 142 81 chr20 3834457 3834608 -68319274 - HAL1 LINE L1 -674 1833 1693 2328 103 0 0 chr20 3834608 3834910 -68318972 + AluSx SINE Alu 1 302 -10 333 218 142 81 chr20 3834910 3834931 -68318951 - HAL1 LINE L1 -814 1693 1675 216 0 0 0 chr20 3834931 3834955 -68318927 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 333 218 142 81 chr20 3834955 3834978 -68318904 - HAL1 LINE L1 -832 1675 1625 1232 126 0 0 chr20 3834979 3835153 -68318729 + AluSg/x SINE Alu 137 310 -2 21 36 0 0 chr20 3835193 3835221 -68318661 + AT_rich Low_complexity Low_complexity 1 28 0 980 109 13 26 chr20 3835232 3835388 -68318494 + BC200 scRNA scRNA 1 154 -46 3321 219 65 70 chr20 3835417 3835632 -68318250 - L1MEc LINE L1 -5217 1179 964 863 154 0 8 chr20 3835632 3835762 -68318120 - FLAM_A SINE Alu -4 129 1 3321 219 65 70 chr20 3835762 3836192 -68317690 - L1MEc LINE L1 -5432 964 533 15521 120 25 53 chr20 3836192 3836593 -68317289 - Tigger1 DNA MER2_type 0 2418 2007 1492 166 18 109 chr20 3836593 3836931 -68316951 - AluJo SINE Alu 0 312 6 15521 120 25 53 chr20 3836931 3837035 -68316847 - Tigger1 DNA MER2_type -411 2007 1902 315 0 0 0 chr20 3837035 3837070 -68316812 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2270 87 0 0 chr20 3837076 3837353 -68316529 - AluSx SINE Alu -35 277 1 15521 120 25 53 chr20 3837353 3838304 -68315578 - Tigger1 DNA MER2_type -521 1897 1050 2070 136 0 13 chr20 3838304 3838620 -68315262 + AluJb SINE Alu 1 312 0 15521 120 25 53 chr20 3838620 3839642 -68314240 - Tigger1 DNA MER2_type -1368 1050 1 3321 219 65 70 chr20 3839642 3840034 -68313848 - L1MEc LINE L1 -5863 533 146 2425 53 3 23 chr20 3840177 3840479 -68313403 - AluY SINE Alu -15 296 1 1915 123 20 3 chr20 3840513 3840805 -68313077 + AluSq SINE Alu 1 297 -16 389 251 105 111 chr20 3840805 3841042 -68312840 - HAL1 LINE L1 -1068 1439 1202 2125 118 3 3 chr20 3841042 3841338 -68312544 - AluSx SINE Alu -16 296 1 389 251 105 111 chr20 3841338 3841749 -68312133 - HAL1 LINE L1 -1305 1202 795 1404 134 79 66 chr20 3841903 3842077 -68311805 - AluJo SINE Alu -3 309 128 2242 106 0 0 chr20 3842077 3842369 -68311513 - AluSc SINE Alu -17 292 1 1404 134 79 66 chr20 3842369 3842499 -68311383 - AluJo SINE Alu -184 128 1 2697 23 0 3 chr20 3842995 3843303 -68310579 - AluY SINE Alu -3 308 2 826 263 62 9 chr20 3844320 3844544 -68309338 + MIR SINE MIR 8 243 -19 34 42 0 0 chr20 3844558 3844606 -68309276 + AT_rich Low_complexity Low_complexity 1 48 0 200 182 0 0 chr20 3845348 3845381 -68308501 + (TGGG)n Simple_repeat Simple_repeat 3 35 0 246 243 14 14 chr20 3846964 3847034 -68306848 + L1M4 LINE L1 4959 5028 -1118 2081 116 42 0 chr20 3847239 3847524 -68306358 + AluSx SINE Alu 1 297 -15 4624 137 52 43 chr20 3848115 3848444 -68305438 - MER4D LTR ERV1 0 865 541 2417 78 0 19 chr20 3848444 3848752 -68305130 + AluSg SINE Alu 1 302 -8 4624 137 52 43 chr20 3848752 3849121 -68304761 - MER4D LTR ERV1 -324 541 194 1825 151 27 7 chr20 3849121 3849419 -68304463 - AluJb SINE Alu -8 304 1 4624 137 52 43 chr20 3849419 3849615 -68304267 - MER4D LTR ERV1 -671 194 1 1758 120 84 4 chr20 3850996 3851270 -68302612 + AluSg SINE Alu 6 301 -9 2158 113 17 0 chr20 3851440 3851741 -68302141 + AluSx SINE Alu 1 306 -6 1474 148 14 0 chr20 3852073 3852289 -68301593 - MER20 DNA MER1_type 0 219 1 333 228 73 32 chr20 3853615 3853738 -68300144 - L2 LINE L2 -41 3272 3145 420 149 138 0 chr20 3854293 3854380 -68299502 - L1M4 LINE L1 -2472 3674 3576 2051 82 78 4 chr20 3854933 3855214 -68298668 - AluSx SINE Alu -10 302 1 2093 118 17 3 chr20 3855460 3855756 -68298126 - AluSx SINE Alu -12 300 1 1130 200 33 9 chr20 3855890 3856100 -68297782 + U3 snRNA snRNA 1 215 -2 914 126 0 30 chr20 3856198 3856333 -68297549 - FLAM_A SINE Alu -1 132 2 4944 228 43 41 chr20 3856352 3857086 -68296796 + L1MC/D LINE L1 3725 4456 -1786 1531 151 4 54 chr20 3857086 3857365 -68296517 - AluJo SINE Alu -19 293 29 4944 228 43 41 chr20 3857365 3857669 -68296213 + L1MC/D LINE L1 4456 4758 -1484 766 202 16 0 chr20 3857669 3857798 -68296084 + FLAM_A SINE Alu 1 131 -2 4944 228 43 41 chr20 3857798 3858669 -68295213 + L1MC/D LINE L1 4758 5548 -694 3036 214 36 0 chr20 3858652 3859368 -68294514 + L1MB2 LINE L1 4468 5209 -937 * 4199 140 39 92 chr20 3859372 3859422 -68294460 + L1MB2 LINE L1 5282 5333 -838 1716 148 6 81 chr20 3859422 3859754 -68294128 + AluJo SINE Alu 1 307 -5 4199 140 39 92 chr20 3859754 3860620 -68293262 + L1MB2 LINE L1 5333 6150 -21 1393 138 0 9 chr20 3860621 3860831 -68293051 - AluSq SINE Alu -4 309 102 1774 151 7 21 chr20 3860832 3861111 -68292771 - AluJb SINE Alu -37 275 1 869 164 0 15 chr20 3861147 3861281 -68292601 + FLAM_C SINE Alu 2 133 0 739 275 55 55 chr20 3861282 3861415 -68292467 + L1MC4 LINE L1 7552 7684 -358 2266 115 0 0 chr20 3861415 3861719 -68292163 + AluSx SINE Alu 1 304 -8 739 275 55 55 chr20 3861719 3862033 -68291849 + L1MC4 LINE L1 7684 8002 -40 2158 109 20 0 chr20 3862033 3862326 -68291556 - AluSx SINE Alu -13 299 1 739 275 55 55 chr20 3862326 3862368 -68291514 + L1MC4 LINE L1 8001 8042 0 291 247 0 21 chr20 3862978 3863075 -68290807 - L1ME4a LINE L1 -49 6072 5978 2385 93 6 0 chr20 3863229 3863540 -68290342 - AluSp SINE Alu 0 313 1 1345 173 112 29 chr20 3863571 3863849 -68290033 + AluJo SINE Alu 1 301 -11 263 303 53 61 chr20 3864083 3864215 -68289667 - MIR3 SINE MIR -73 135 5 313 250 48 32 chr20 3864655 3864779 -68289103 - L1MC4a LINE L1 -1879 5929 5804 244 0 0 0 chr20 3864828 3864855 -68289027 + (TTTA)n Simple_repeat Simple_repeat 2 160 0 714 130 0 0 chr20 3864855 3864955 -68288927 - AluSg/x SINE Alu -1 308 183 1423 161 32 28 chr20 3864955 3865203 -68288679 + AluJb SINE Alu 64 312 0 575 290 20 20 chr20 3865236 3865436 -68288446 - L1MC4a LINE L1 -2035 5773 5574 366 312 92 44 chr20 3865581 3865717 -68288165 - L1MC4a LINE L1 -757 5389 5261 2204 113 3 3 chr20 3865717 3866017 -68287865 + AluSq SINE Alu 1 300 -13 366 312 92 44 chr20 3866017 3866130 -68287752 - L1MC4a LINE L1 -885 5261 5128 2757 29 0 13 chr20 3866617 3866932 -68286950 - AluY SINE Alu 0 311 1 2065 145 10 0 chr20 3866937 3867241 -68286641 - AluSx SINE Alu -5 307 1 254 269 133 23 chr20 3867248 3867504 -68286378 - L1MC4a LINE L1 -1481 4665 4382 2451 114 28 19 chr20 3867516 3867877 -68286005 + THE1B LTR MaLR 1 364 0 595 254 207 65 chr20 3868024 3868626 -68285256 - L2 LINE L2 0 3313 2622 1926 161 0 3 chr20 3868626 3868924 -68284958 + AluJb SINE Alu 1 297 -15 595 254 207 65 chr20 3868924 3868961 -68284921 - L2 LINE L2 -691 2622 2592 2484 90 0 0 chr20 3868968 3869279 -68284603 - AluY SINE Alu 0 311 1 260 309 157 20 chr20 3869414 3869618 -68284264 - L1MC4a LINE L1 -2293 3853 3622 354 234 43 11 chr20 3870010 3870104 -68283778 + MLT1K LTR MaLR 492 588 0 274 284 38 71 chr20 3870117 3870328 -68283554 + L1MC4 LINE L1 7838 8041 -1 2183 113 30 0 chr20 3870868 3871169 -68282713 - AluSg SINE Alu 0 310 1 445 241 65 121 chr20 3871243 3871475 -68282407 + MLT1J LTR MaLR 156 374 -137 1148 157 7 117 chr20 3871891 3872191 -68281691 + L1MD3 LINE L1 7719 7985 -10 2139 108 24 3 chr20 3872865 3873161 -68280721 - AluSx SINE Alu -10 302 1 961 181 101 21 chr20 3873622 3873860 -68280022 - HAL1 LINE L1 -787 1720 1464 1656 148 75 35 chr20 3873919 3874241 -68279641 - L1MA8 LINE L1 0 6291 5951 1575 161 0 23 chr20 3874241 3874501 -68279381 - AluJo SINE Alu -14 298 45 1656 148 75 35 chr20 3874501 3874549 -68279333 - L1MA8 LINE L1 -340 5951 5906 333 256 83 16 chr20 3874539 3874660 -68279222 - HAL1 LINE L1 -1106 1401 1273 * 300 261 89 9 chr20 3874660 3874840 -68279042 + L2 LINE L2 539 793 -2521 1618 225 133 43 chr20 3874845 3875467 -68278415 + L2 LINE L2 1154 1831 -1483 700 127 9 9 chr20 3875485 3875595 -68278287 - FLAM_A SINE Alu -14 128 19 376 205 0 13 chr20 3875618 3875696 -68278186 + L2 LINE L2 1865 1941 -1373 2273 100 0 20 chr20 3875696 3875997 -68277885 - AluSq SINE Alu -18 295 1 328 206 0 15 chr20 3876075 3876143 -68277739 - HAL1 LINE L1 -925 1582 1516 218 128 26 0 chr20 3876156 3876195 -68277687 + L2 LINE L2 2412 2451 -863 202 270 128 40 chr20 3876232 3876380 -68277502 + L2 LINE L2 3119 3279 -34 713 328 136 3 chr20 3876501 3876861 -68277021 - MLT1I LTR MaLR -1 408 1 29 70 0 0 chr20 3879299 3879356 -68274526 + GC_rich Low_complexity Low_complexity 1 57 0 203 61 30 0 chr20 3879356 3879389 -68274493 + (CGGGGG)n Simple_repeat Simple_repeat 5 38 0 185 130 43 0 chr20 3879629 3879675 -68274207 + (CCCCG)n Simple_repeat Simple_repeat 1 48 0 2295 78 7 0 chr20 3880647 3880942 -68272940 - AluSx SINE Alu -15 297 1 2162 114 13 3 chr20 3880942 3881249 -68272633 - AluSx SINE Alu -2 310 1 657 209 0 0 chr20 3881639 3881749 -68272133 + FLAM_A SINE Alu 7 116 -26 267 137 27 27 chr20 3881764 3881837 -68272045 + (TA)n Simple_repeat Simple_repeat 1 73 0 1093 168 0 0 chr20 3881845 3882018 -68271864 + AluJb SINE Alu 127 299 -13 4225 171 31 28 chr20 3882024 3882751 -68271131 - L1MB7 LINE L1 -82 6102 5363 2609 65 3 0 chr20 3882751 3883058 -68270824 - AluSp SINE Alu -5 308 1 4225 171 31 28 chr20 3883058 3883575 -68270307 - L1MB7 LINE L1 -821 5363 4849 2170 122 3 0 chr20 3884561 3884857 -68269025 - AluSq SINE Alu -16 297 1 1595 179 26 29 chr20 3884944 3885257 -68268625 + AluJo SINE Alu 1 312 0 1946 145 20 7 chr20 3885578 3885881 -68268001 - AluSx SINE Alu -5 307 1 330 143 18 0 chr20 3886159 3886215 -68267667 - MSTA LTR MaLR 0 428 372 553 31 0 0 chr20 3886249 3886313 -68267569 - MSTA LTR MaLR -40 388 325 * 2596 99 63 5 chr20 3886292 3886686 -68267196 - MSTA LTR MaLR -11 417 1 6323 159 7 22 chr20 3886691 3887748 -68266134 - MSTA-int LTR MaLR -6 1645 605 1358 157 0 0 chr20 3887748 3887946 -68265936 - AluSq SINE Alu -115 198 1 3592 162 0 0 chr20 3887947 3888542 -68265340 - MSTA-int LTR MaLR -1026 568 1 2608 115 66 5 chr20 3888552 3888944 -68264938 - MSTA LTR MaLR -12 416 1 391 132 146 62 chr20 3889171 3889315 -68264567 - MER53 DNA DNA -33 156 1 2214 117 0 0 chr20 3889383 3889674 -68264208 + AluSg SINE Alu 1 291 -19 2524 198 71 94 chr20 3889688 3889858 -68264024 - L1ME2 LINE L1 0 6164 5992 312 27 0 0 chr20 3889858 3889895 -68263987 + (CA)n Simple_repeat Simple_repeat 2 38 0 2524 198 71 94 chr20 3889895 3889953 -68263929 - L1ME2 LINE L1 -172 5992 5934 1986 157 0 10 chr20 3889953 3890258 -68263624 - AluJo SINE Alu -10 302 1 2524 198 71 94 chr20 3890258 3890678 -68263204 - L1ME2 LINE L1 -230 5934 5506 2312 105 3 3 chr20 3890678 3890983 -68262899 + AluSx SINE Alu 3 307 -5 2524 198 71 94 chr20 3890983 3891324 -68262558 - L1ME2 LINE L1 -658 5506 5201 2244 111 0 3 chr20 3891324 3891621 -68262261 - AluSq SINE Alu -6 307 12 2524 198 71 94 chr20 3891621 3891704 -68262178 - L1ME2 LINE L1 -963 5201 5118 349 224 41 10 chr20 3892011 3892024 -68261858 - MIR SINE MIR -71 191 180 2571 190 43 24 chr20 3892024 3892556 -68261326 + MLT1F LTR MaLR 1 542 0 349 224 41 10 chr20 3892556 3892640 -68261242 - MIR SINE MIR -82 180 91 768 168 0 28 chr20 3892709 3892845 -68261037 + FLAM_C SINE Alu 2 135 -177 2546 65 0 0 chr20 3892845 3893139 -68260743 - AluSq SINE Alu -19 294 1 39 31 0 16 chr20 3893145 3893182 -68260700 + AT_rich Low_complexity Low_complexity 1 38 -25 1652 166 0 18 chr20 3893182 3893459 -68260423 + AluJb SINE Alu 15 286 -26 39 31 0 16 chr20 3893459 3893485 -68260397 + AT_rich Low_complexity Low_complexity 38 63 0 186 291 55 0 chr20 3893667 3893722 -68260160 - MIR SINE MIR -195 67 10 3009 145 8 22 chr20 3894029 3894539 -68259343 + L1PB4 LINE L1 5654 6156 0 355 193 40 40 chr20 3894541 3894717 -68259165 + (TATAA)n Simple_repeat Simple_repeat 1 176 0 218 100 67 0 chr20 3894765 3894825 -68259057 + (TA)n Simple_repeat Simple_repeat 2 65 0 1286 230 65 25 chr20 3894885 3895207 -68258675 + LTR16C LTR ERVL 139 473 -18 2315 103 6 0 chr20 3895383 3895694 -68258188 + AluSp SINE Alu 1 313 0 2278 94 17 0 chr20 3895821 3896118 -68257764 + AluSx SINE Alu 1 302 -10 1497 85 60 0 chr20 3896184 3896383 -68257499 + AluSq SINE Alu 81 291 -22 692 249 16 104 chr20 3896384 3896550 -68257332 + L1MA9 LINE L1 5942 6060 -252 1775 174 7 0 chr20 3896550 3896837 -68257045 - AluJb SINE Alu -23 289 1 692 249 16 104 chr20 3896837 3897035 -68256847 + L1MA9 LINE L1 6060 6274 -38 492 239 107 89 chr20 3897048 3897155 -68256727 + L1ME LINE L1 5328 5432 -689 2300 84 10 7 chr20 3897155 3897451 -68256431 + AluSg SINE Alu 1 297 -13 492 239 107 89 chr20 3897451 3897618 -68256264 + L1ME LINE L1 5432 5595 -526 680 142 0 101 chr20 3897618 3897766 -68256116 + AluJ SINE Alu 1 133 -169 492 239 107 89 chr20 3897766 3897815 -68256067 + L1ME LINE L1 5595 5642 -479 1624 174 50 4 chr20 3897815 3898096 -68255786 + AluJb SINE Alu 1 294 -18 492 239 107 89 chr20 3898096 3898164 -68255718 + L1ME LINE L1 5642 5727 -394 21 0 0 0 chr20 3898353 3898374 -68255508 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr20 3898472 3898504 -68255378 + AT_rich Low_complexity Low_complexity 1 32 0 1818 180 0 7 chr20 3898505 3898794 -68255088 - AluJo SINE Alu -25 287 1 1879 186 95 3 chr20 3899014 3899384 -68254498 - MER41D LTR ERV1 -9 548 145 517 137 147 0 chr20 3899384 3899479 -68254403 + AluJ SINE Alu 120 228 -84 2279 105 0 0 chr20 3899497 3899801 -68254081 - AluSc SINE Alu -5 304 1 291 100 0 0 chr20 3899813 3899853 -68254029 - MER41D LTR ERV1 -417 140 101 537 132 0 0 chr20 3899858 3899934 -68253948 - AluSq SINE Alu -153 160 85 1180 124 0 0 chr20 3899934 3900095 -68253787 - AluSx SINE Alu -133 179 19 499 133 0 0 chr20 3900096 3900171 -68253711 - MER41D LTR ERV1 -482 75 1 314 326 54 45 chr20 3900173 3900300 -68253582 + L1ME LINE L1 5347 5478 -643 1835 106 35 77 chr20 3900300 3900611 -68253271 + AluSx SINE Alu 1 298 -14 314 326 54 45 chr20 3900611 3900725 -68253157 + L1ME LINE L1 5478 5590 -531 656 274 5 53 chr20 3900968 3901176 -68252706 - MLT1J LTR MaLR -228 283 86 1023 118 0 0 chr20 3901221 3901356 -68252526 + AluSq/x SINE Alu 1 135 -178 2106 134 0 7 chr20 3901356 3901661 -68252221 + AluSx SINE Alu 1 303 -9 2919 82 31 11 chr20 3901753 3902212 -68251670 - MER1A DNA MER1_type 0 529 25 963 223 54 132 chr20 3902209 3902693 -68251189 + LTR16A1 LTR ERVL 12 457 0 * 244 286 104 49 chr20 3902801 3903087 -68250795 + MLT1I LTR MaLR 1 334 -215 2445 57 0 0 chr20 3903230 3903536 -68250346 + AluY SINE Alu 1 306 0 559 293 61 26 chr20 3904355 3904636 -68249246 + LTR16A LTR ERVL 1 360 -90 830 149 97 0 chr20 3904675 3904809 -68249073 - AluJb SINE Alu -25 287 141 248 284 84 0 chr20 3904920 3905015 -68248867 + HAL1 LINE L1 17 119 -2388 1768 189 0 10 chr20 3905048 3905344 -68248538 + AluJo SINE Alu 1 293 -19 274 225 0 28 chr20 3905344 3905415 -68248467 + L1MC3 LINE L1 5868 5936 -1872 1122 144 29 0 chr20 3906151 3906325 -68247557 - AluSg/x SINE Alu 0 312 134 1202 271 60 2 chr20 3906326 3906708 -68247174 - L1MC4 LINE L1 -533 7509 7101 2102 145 0 0 chr20 3906708 3907011 -68246871 - AluSx SINE Alu -9 303 1 1202 271 60 2 chr20 3907011 3907030 -68246852 - L1MC4 LINE L1 -941 7101 7085 951 139 0 14 chr20 3907044 3907188 -68246694 + FLAM_C SINE Alu 1 142 -1 815 204 0 0 chr20 3907231 3907368 -68246514 - FRAM SINE Alu -26 150 14 418 216 36 0 chr20 3907386 3907497 -68246385 - L1MC4 LINE L1 -968 7074 6960 855 148 0 8 chr20 3908188 3908316 -68245566 + FLAM_C SINE Alu 1 127 -16 434 261 54 0 chr20 3908334 3908445 -68245437 + HAL1 LINE L1 10 126 -2381 1934 145 0 39 chr20 3908500 3908810 -68245072 + AluJb SINE Alu 1 298 -14 255 231 0 0 chr20 3909185 3909237 -68244645 + LTR37B LTR ERV1 233 284 -184 423 0 0 0 chr20 3909295 3909342 -68244540 + (CA)n Simple_repeat Simple_repeat 2 48 0 2603 40 10 0 chr20 3909345 3909642 -68244240 - AluY SINE Alu -11 300 1 1283 135 60 71 chr20 3909642 3909691 -68244191 - MER41D LTR ERV1 -294 263 215 2281 122 0 0 chr20 3909691 3909995 -68243887 - AluSx SINE Alu -8 304 1 1283 135 60 71 chr20 3909995 3910211 -68243671 - MER41D LTR ERV1 -342 215 1 234 243 27 40 chr20 3910212 3910286 -68243596 + HAL1 LINE L1 1316 1388 -1119 1946 143 3 3 chr20 3910287 3910573 -68243309 + AluJo SINE Alu 1 286 -26 324 70 0 0 chr20 3910574 3910617 -68243265 + (CA)n Simple_repeat Simple_repeat 2 44 0 2933 185 141 121 chr20 3910617 3911198 -68242684 + L1MC3 LINE L1 6542 7110 -675 329 216 52 72 chr20 3911198 3911295 -68242587 + MLT1F1 LTR MaLR 39 133 -434 2933 185 141 121 chr20 3911295 3911798 -68242084 + L1MC3 LINE L1 7110 7745 -40 180 0 0 0 chr20 3911798 3911818 -68242064 + (T)n Simple_repeat Simple_repeat 1 20 0 579 253 0 39 chr20 3911911 3912065 -68241817 - L2 LINE L2 -1 3312 3165 205 363 25 0 chr20 3912035 3912115 -68241767 - L2 LINE L2 -646 2668 2587 * 6428 63 32 76 chr20 3912116 3913542 -68240340 - SVA Other Other -645 1384 342 518 122 0 0 chr20 3913557 3913631 -68240251 - AluJb SINE Alu -187 125 52 1962 138 7 17 chr20 3913640 3913936 -68239946 - AluJo SINE Alu -19 293 1 454 211 45 23 chr20 3913988 3914121 -68239761 + HAL1 LINE L1 1392 1527 -980 330 263 42 94 chr20 3914255 3914468 -68239414 + HAL1 LINE L1 2112 2313 -194 201 200 73 0 chr20 3914548 3914603 -68239279 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 2131 90 72 0 chr20 3914775 3915054 -68238828 + AluSq SINE Alu 1 299 -14 265 256 44 15 chr20 3915486 3915623 -68238259 + L1MEd LINE L1 796 936 -5269 264 159 71 40 chr20 3915790 3915916 -68237966 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 1728 173 3 0 chr20 3916044 3916328 -68237554 + AluJo SINE Alu 12 296 -16 447 331 69 38 chr20 3916335 3916570 -68237312 + L1MEd LINE L1 1663 1889 -4507 2181 112 0 20 chr20 3916570 3916875 -68237007 + AluSc SINE Alu 1 299 -10 447 331 69 38 chr20 3916875 3917157 -68236725 + L1MEd LINE L1 1889 2200 -4196 862 122 0 43 chr20 3917157 3917296 -68236586 + FLAM_C SINE Alu 1 133 0 447 331 69 38 chr20 3917296 3917311 -68236571 + L1MEd LINE L1 2200 2213 -4183 412 285 16 48 chr20 3917323 3917347 -68236535 + L1MEd LINE L1 2467 2490 -3725 1847 156 21 14 chr20 3917347 3917635 -68236247 + AluSx SINE Alu 1 290 -22 412 285 16 48 chr20 3917635 3917796 -68236086 + L1MEd LINE L1 2490 2646 -3569 951 293 81 7 chr20 3918013 3918471 -68235411 + L1MEd LINE L1 3213 3704 -2511 267 258 105 72 chr20 3918496 3918550 -68235332 + L1M4 LINE L1 4704 4755 -1391 1616 175 0 53 chr20 3918550 3918853 -68235029 + AluJb SINE Alu 3 289 -23 267 258 105 72 chr20 3918853 3919007 -68234875 + L1M4 LINE L1 4755 4919 -1227 314 279 137 6 chr20 3919007 3919168 -68234714 - LTR33A LTR ERVL -50 473 292 226 303 90 48 chr20 3919239 3919427 -68234455 - LTR50 LTR ERVL -564 231 36 484 254 88 82 chr20 3919433 3919573 -68234309 + L1M4 LINE L1 4925 5063 -1083 2292 105 0 0 chr20 3919573 3919869 -68234013 - AluSx SINE Alu -16 296 1 484 254 88 82 chr20 3919869 3919949 -68233933 + L1M4 LINE L1 5063 5141 -1005 2044 89 31 21 chr20 3919949 3920240 -68233642 - AluSp SINE Alu -19 294 1 828 139 31 0 chr20 3920246 3920375 -68233507 - FLAM_C SINE Alu 0 133 1 484 254 88 82 chr20 3920375 3920488 -68233394 + L1M4 LINE L1 5145 5268 -878 2360 113 0 0 chr20 3920554 3920863 -68233019 - AluSx SINE Alu -3 309 1 291 161 0 18 chr20 3920896 3920952 -68232930 + AluSp/q SINE Alu 242 296 -7 258 232 0 0 chr20 3920953 3921009 -68232873 + HAL1 LINE L1 2312 2367 -140 242 246 35 0 chr20 3921045 3921102 -68232780 + CT-rich Low_complexity Low_complexity 2 60 0 1098 198 9 9 chr20 3921102 3921314 -68232568 - AluJb SINE Alu -17 295 84 263 280 0 0 chr20 3921314 3921389 -68232493 + HAL1 LINE L1 2432 2506 -1 2034 96 0 32 chr20 3921539 3921819 -68232063 + AluSx SINE Alu 26 296 -16 453 301 29 21 chr20 3921825 3922104 -68231778 + L1M4 LINE L1 4754 5034 -1112 2498 76 3 0 chr20 3922508 3922809 -68231073 - AluSc SINE Alu -7 302 1 1655 145 48 7 chr20 3922819 3923110 -68230772 - AluJo SINE Alu 0 304 3 296 311 47 14 chr20 3923111 3923259 -68230623 + MLT1K LTR MaLR 421 573 -15 1587 185 16 53 chr20 3923420 3923739 -68230143 + AluJb SINE Alu 1 307 -5 483 252 14 84 chr20 3923917 3924131 -68229751 - MLT1K LTR MaLR -66 522 324 607 311 102 68 chr20 3924146 3924635 -68229247 - MLT1K LTR MaLR -8 580 75 1269 244 79 16 chr20 3924860 3925290 -68228592 - LTR16A1 LTR ERVL 0 457 1 1804 174 20 103 chr20 3925362 3925412 -68228470 - L1MA9 LINE L1 -38 6274 6221 1591 99 41 0 chr20 3925412 3925633 -68228249 + MER30 DNA MER1_type 1 230 0 1804 174 20 103 chr20 3925633 3925934 -68227948 - L1MA9 LINE L1 -91 6221 5973 1716 181 4 4 chr20 3925934 3926215 -68227667 - AluJb SINE Alu -31 281 1 1804 174 20 103 chr20 3926215 3926355 -68227527 - L1MA9 LINE L1 -339 5973 5823 701 154 8 0 chr20 3926355 3926472 -68227410 - FLAM_C SINE Alu -2 141 24 1864 234 64 21 chr20 3926606 3927076 -68226806 + LTR16C LTR ERVL 1 490 -1 24 53 0 0 chr20 3927182 3927220 -68226662 + AT_rich Low_complexity Low_complexity 1 38 0 294 154 0 0 chr20 3927302 3927354 -68226528 + U5 snRNA snRNA 1 52 -64 1984 118 4 0 chr20 3927375 3927647 -68226235 + AluSx SINE Alu 1 273 -39 556 219 7 7 chr20 3927647 3927802 -68226080 + GA-rich Low_complexity Low_complexity 2 156 0 2378 91 3 0 chr20 3927930 3928227 -68225655 + AluSx SINE Alu 1 298 -14 570 266 81 9 chr20 3928840 3929062 -68224820 - MIR SINE MIR -6 256 19 213 322 11 33 chr20 3929163 3929253 -68224629 + MIR SINE MIR 33 120 -88 1244 181 109 26 chr20 3929850 3929951 -68223931 + AluJb SINE Alu 1 92 -220 228 67 0 0 chr20 3929951 3929981 -68223901 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1244 181 109 26 chr20 3929981 3930144 -68223738 + AluJb SINE Alu 92 287 -25 188 183 0 33 chr20 3930145 3930205 -68223677 + (CATA)n Simple_repeat Simple_repeat 2 59 0 239 328 0 0 chr20 3930441 3930508 -68223374 + L2 LINE L2 3107 3173 -99 2087 121 0 0 chr20 3930728 3931059 -68222823 - AluSx SINE Alu 0 331 1 456 19 0 0 chr20 3931233 3931286 -68222596 + (TG)n Simple_repeat Simple_repeat 1 53 0 2035 123 0 46 chr20 3932020 3932136 -68221746 - AluSq SINE Alu -2 311 191 2503 60 3 0 chr20 3932136 3932436 -68221446 - AluY SINE Alu -10 301 1 2035 123 0 46 chr20 3932436 3932645 -68221237 - AluSq SINE Alu -122 191 1 1217 261 164 3 chr20 3932910 3933300 -68220582 + LTR16B LTR ERVL 1 453 -11 904 261 20 0 chr20 3933314 3933513 -68220369 - MER63A DNA MER1_type -7 203 1 493 228 35 48 chr20 3933513 3933658 -68220224 + L1ME LINE L1 5642 5784 -386 883 181 44 0 chr20 3933677 3933837 -68220045 - AluJo/FRAM SINE Alu -12 300 134 1613 176 7 29 chr20 3933837 3934143 -68219739 - AluJo SINE Alu -13 299 1 2191 119 3 0 chr20 3934151 3934446 -68219436 - AluSx SINE Alu -16 296 1 2056 152 3 0 chr20 3934446 3934769 -68219113 - L1M3 LINE L1 -374 5797 5474 677 173 8 31 chr20 3934770 3934897 -68218985 - FLAM_A SINE Alu -5 128 5 2281 109 0 10 chr20 3934929 3935233 -68218649 - AluSx SINE Alu -11 301 1 285 265 20 10 chr20 3935300 3935398 -68218484 + L2 LINE L2 3215 3313 0 1209 182 146 77 chr20 3935428 3935534 -68218348 + MLT1D LTR MaLR 1 98 -407 2226 101 7 13 chr20 3935534 3935840 -68218042 + AluSx SINE Alu 2 305 -7 1209 182 146 77 chr20 3935840 3936151 -68217731 + MLT1D LTR MaLR 98 447 -58 1022 179 0 0 chr20 3936373 3936541 -68217341 + FAM SINE Alu 4 171 -4 216 0 0 0 chr20 3936605 3936629 -68217253 + (T)n Simple_repeat Simple_repeat 1 24 0 315 283 10 20 chr20 3936725 3936824 -68217058 + L1M4 LINE L1 2260 2357 -3789 272 222 25 0 chr20 3937126 3937207 -68216675 + CT-rich Low_complexity Low_complexity 4 86 0 413 180 90 0 chr20 3937410 3937499 -68216383 + MLT1D LTR MaLR 407 503 -2 1022 224 57 24 chr20 3938406 3938652 -68215230 + LTR16A1 LTR ERVL 204 457 0 388 265 146 40 chr20 3939244 3939395 -68214487 - MLT1H1 LTR MaLR 0 595 429 * 947 202 80 106 chr20 3939362 3939597 -68214285 - MLT1H1 LTR MaLR -251 304 77 243 0 0 0 chr20 3939597 3939624 -68214258 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 947 202 80 106 chr20 3939624 3939700 -68214182 - MLT1H1 LTR MaLR -478 77 1 2005 148 3 13 chr20 3939767 3940078 -68213804 - AluJo SINE Alu -3 309 2 376 243 73 68 chr20 3940837 3941178 -68212704 - MLT1G1 LTR MaLR 0 595 248 2155 86 46 0 chr20 3941231 3941511 -68212371 - AluSg SINE Alu -17 293 1 184 234 0 21 chr20 3941891 3941938 -68211944 - L2 LINE L2 -1 3271 3226 1923 129 11 3 chr20 3941945 3942231 -68211651 - AluJb SINE Alu -24 288 1 186 143 0 0 chr20 3942587 3942622 -68211260 + (CACG)n Simple_repeat Simple_repeat 3 37 0 202 235 0 49 chr20 3942772 3942853 -68211029 + (CGG)n Simple_repeat Simple_repeat 2 78 0 318 132 0 0 chr20 3942949 3943002 -68210880 + (CTG)n Simple_repeat Simple_repeat 3 55 0 201 143 0 0 chr20 3943009 3943044 -68210838 + (CGG)n Simple_repeat Simple_repeat 2 36 0 469 256 119 74 chr20 3944107 3944419 -68209463 - L2 LINE L2 -62 3251 2926 277 280 196 40 chr20 3944758 3945207 -68208675 - L2 LINE L2 -13 3259 2755 2406 53 3 0 chr20 3946089 3946395 -68207487 + AluY SINE Alu 1 307 0 2294 92 3 3 chr20 3946414 3946717 -68207165 + AluSg SINE Alu 1 303 -7 203 197 158 26 chr20 3946976 3947052 -68206830 - MIR SINE MIR -15 247 162 1863 165 0 3 chr20 3947530 3947833 -68206049 + AluJb SINE Alu 5 306 -6 378 278 105 23 chr20 3947892 3948025 -68205857 - MIR SINE MIR -113 149 6 2370 94 0 3 chr20 3948242 3948541 -68205341 + AluSq SINE Alu 3 300 -13 206 233 0 0 chr20 3948658 3948701 -68205181 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3948735 3948778 -68205104 + L2 LINE L2 3180 3222 -91 204 219 0 0 chr20 3948812 3948853 -68205029 + L2 LINE L2 3180 3220 -93 222 209 0 0 chr20 3948889 3948932 -68204950 + L2 LINE L2 3180 3222 -91 222 209 0 0 chr20 3948966 3949009 -68204873 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3949043 3949086 -68204796 + L2 LINE L2 3180 3222 -91 222 209 0 0 chr20 3949120 3949163 -68204719 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3949197 3949240 -68204642 + L2 LINE L2 3180 3222 -91 219 166 49 190 chr20 3949317 3949480 -68204402 + L2 LINE L2 3174 3313 0 3239 72 54 41 chr20 3949924 3950408 -68203474 + L1PA7 LINE L1 5664 6153 -1 1480 175 130 0 chr20 3950633 3950902 -68202980 - AluJo SINE Alu -8 304 1 347 361 44 47 chr20 3950936 3951274 -68202608 - L2 LINE L2 -4 3268 2932 1794 212 67 25 chr20 3951300 3951748 -68202134 - MLT1C LTR MaLR 0 467 1 406 301 93 82 chr20 3951887 3952316 -68201566 + MLT1K LTR MaLR 155 588 0 244 128 0 0 chr20 3952347 3952386 -68201496 - MLT1A1 LTR MaLR -4 361 323 1569 181 14 31 chr20 3953067 3953355 -68200527 - AluJo SINE Alu -27 285 3 210 71 0 0 chr20 3953500 3953528 -68200354 + (T)n Simple_repeat Simple_repeat 1 28 0 25 112 0 0 chr20 3953773 3953889 -68199993 + AT_rich Low_complexity Low_complexity 1 116 0 314 232 53 70 chr20 3954923 3955069 -68198813 - L1ME3A LINE L1 -311 5842 5687 1724 187 3 3 chr20 3955069 3955363 -68198519 - AluJb SINE Alu -18 294 1 314 232 53 70 chr20 3955363 3955420 -68198462 - L1ME3A LINE L1 -466 5687 5631 267 239 65 84 chr20 3955420 3955683 -68198199 - Charlie2 DNA MER1_type -1 2861 2604 1856 182 3 3 chr20 3955683 3955990 -68197892 + AluJo SINE Alu 1 307 -5 436 343 15 27 chr20 3956013 3956279 -68197603 - L1ME3A LINE L1 -1008 5121 4859 351 0 0 0 chr20 3956626 3956665 -68197217 + (TTA)n Simple_repeat Simple_repeat 2 40 0 229 253 122 61 chr20 3956871 3957116 -68196766 - L1ME3A LINE L1 -1820 4309 4050 386 260 26 52 chr20 3957161 3957327 -68196555 - L1ME3A LINE L1 -2248 3881 3719 2428 97 0 0 chr20 3957327 3957636 -68196246 - AluSg SINE Alu -1 309 1 386 260 26 52 chr20 3957636 3957661 -68196221 - L1ME3A LINE L1 -2410 3719 3695 333 291 66 18 chr20 3957678 3957895 -68195987 - L1ME3A LINE L1 -875 1615 1412 385 171 53 135 chr20 3957895 3958065 -68195817 - L1MC5 LINE L1 -48 7913 7758 1565 164 92 0 chr20 3958112 3958393 -68195489 - AluSx SINE Alu 0 312 6 1345 281 106 59 chr20 3958492 3958965 -68194917 - L1MEd LINE L1 -4840 1289 840 1903 101 8 0 chr20 3958965 3959213 -68194669 - AluSg1 SINE Alu -24 285 36 1345 281 106 59 chr20 3959213 3959900 -68193982 - L1MEd LINE L1 -5289 840 82 1464 261 62 62 chr20 3959915 3960665 -68193217 - L1M4 LINE L1 -984 5162 4409 2214 91 0 0 chr20 3960665 3960968 -68192914 - AluSx SINE Alu 0 314 12 1464 261 62 62 chr20 3960968 3961021 -68192861 - L1M4 LINE L1 -1736 4410 4358 524 274 161 46 chr20 3962877 3963336 -68190546 + L2 LINE L2 1702 2213 -1101 192 305 189 12 chr20 3963339 3963503 -68190379 + L2 LINE L2 2349 2541 -773 360 0 0 0 chr20 3963888 3963928 -68189954 + (TG)n Simple_repeat Simple_repeat 2 41 0 282 95 0 0 chr20 3964536 3964578 -68189304 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3964595 3964621 -68189261 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3964627 3964803 -68189079 + (TA)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr20 3964803 3964826 -68189056 + AT_rich Low_complexity Low_complexity 1 23 0 210 37 0 0 chr20 3964842 3964869 -68189013 + (TG)n Simple_repeat Simple_repeat 2 28 0 1592 182 3 27 chr20 3964883 3965180 -68188702 - AluJo SINE Alu -22 290 1 885 116 8 0 chr20 3965181 3965302 -68188580 - AluJo SINE Alu -178 134 13 272 322 148 75 chr20 3965646 3966031 -68187851 - L2 LINE L2 -12 3260 2848 191 322 58 58 chr20 3966068 3966242 -68187640 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3966450 3966556 -68187326 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3966805 3966828 -68187054 + AT_rich Low_complexity Low_complexity 1 23 0 318 272 150 41 chr20 3967049 3967196 -68186686 - MER5B DNA MER1_type -15 163 1 567 250 131 48 chr20 3967395 3967807 -68186075 + L1MC4a LINE L1 5749 6194 -1614 14474 24 0 5 chr20 3967830 3969659 -68184223 - L1PA3 LINE L1 -2928 3218 1399 18137 27 1 2 chr20 3969659 3972591 -68181291 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3972591 3972626 -68181256 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3972936 3973252 -68180630 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3973266 3973517 -68180365 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3974005 3976140 -68177742 + L1MDb LINE L1 7 2009 -4397 1988 124 3 24 chr20 3976140 3976477 -68177405 + AluSq SINE Alu 1 331 0 3363 211 73 70 chr20 3976477 3976751 -68177131 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3976751 3977280 -68176602 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3977281 3977633 -68176249 + L1MDb LINE L1 2273 2672 -3734 1320 189 21 89 chr20 3977646 3978040 -68175842 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3978039 3978082 -68175800 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3978082 3978388 -68175494 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3978388 3978444 -68175438 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3978444 3978467 -68175415 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3978469 3978749 -68175133 + L1MEd LINE L1 1084 1366 -5050 336 123 49 74 chr20 3978750 3978831 -68175051 + MADE1 DNA Mariner 2 80 0 2288 77 7 17 chr20 3978852 3979150 -68174732 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3979162 3979191 -68174691 + MADE1 DNA Mariner 44 72 -8 263 292 44 15 chr20 3979227 3979364 -68174518 + L1MEd LINE L1 1252 1392 -5034 2127 62 52 72 chr20 3979422 3979727 -68174155 - AluSc SINE Alu -8 301 3 766 129 9 9 chr20 3979793 3979909 -68173973 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3979911 3979940 -68173942 + AT_rich Low_complexity Low_complexity 1 29 0 732 258 118 65 chr20 3979940 3980059 -68173823 + L1MEd LINE L1 1511 1622 -4804 938 194 92 10 chr20 3980059 3980265 -68173617 - MER58A DNA MER1_type 0 224 2 732 258 118 65 chr20 3980265 3981211 -68172671 + L1MEd LINE L1 1622 2781 -3645 2118 117 0 23 chr20 3981226 3981533 -68172349 - AluSx SINE Alu -12 300 1 1303 245 62 90 chr20 3981539 3981992 -68171890 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3981992 3982216 -68171666 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3982216 3982619 -68171263 - L1MC4 LINE L1 -419 7623 7210 684 227 122 25 chr20 3982723 3983084 -68170798 + L1MEd LINE L1 3151 3546 -2880 189 0 0 0 chr20 3983816 3983837 -68170045 + (TA)n Simple_repeat Simple_repeat 1 21 0 9459 34 14 0 chr20 3983838 3985767 -68168115 - L1PA4 LINE L1 0 6155 4211 915 74 0 0 chr20 3985772 3985893 -68167989 - L1P LINE L1 -6025 121 1 1038 260 91 37 chr20 3985948 3986409 -68167473 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3986409 3986708 -68167174 + AluJb SINE Alu 1 302 -10 1038 260 91 37 chr20 3986708 3986949 -68166933 + L1MEd LINE L1 4277 4504 -1922 757 298 121 86 chr20 3986970 3988106 -68165776 - L2 LINE L2 -1039 2275 1101 505 245 66 0 chr20 3988121 3988272 -68165610 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3988275 3988340 -68165542 - MLT1L LTR MaLR -6 609 546 3297 58 9 0 chr20 3988456 3988888 -68164994 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3988934 3989187 -68164695 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3989258 3989520 -68164362 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3990107 3990246 -68163636 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3990250 3990370 -68163512 + L1MB7 LINE L1 6060 6184 0 398 222 202 30 chr20 3990401 3990604 -68163278 - L1MC5 LINE L1 -118 7843 7606 333 284 37 8 chr20 3990608 3990742 -68163140 - L1ME LINE L1 -302 5819 5682 258 32 0 0 chr20 3990742 3990773 -68163109 + (A)n Simple_repeat Simple_repeat 1 31 0 385 319 78 20 chr20 3991147 3991347 -68162535 + HAL1 LINE L1 1055 1267 -1237 719 153 7 44 chr20 3991347 3991508 -68162374 + L1PB2 LINE L1 6013 6151 0 250 275 50 17 chr20 3991567 3991687 -68162195 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3992236 3992540 -68161342 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3992683 3992727 -68161155 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3992728 3992897 -68160985 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3992899 3992957 -68160925 + L1MEc LINE L1 2954 3011 -3204 506 189 90 0 chr20 3992971 3993093 -68160789 + L1PA16 LINE L1 6034 6166 0 2077 250 34 13 chr20 3993100 3993540 -68160342 + L1M4 LINE L1 2346 2808 -3338 1539 160 21 50 chr20 3993540 3993822 -68160060 - AluJo SINE Alu -26 286 13 2077 250 34 13 chr20 3993822 3994089 -68159793 + L1M4 LINE L1 2808 3068 -3078 29630 89 13 16 chr20 3994089 3999826 -68154056 + L1PA7 LINE L1 736 6469 0 1768 243 115 38 chr20 3999793 3999833 -68154049 + L1ME2 LINE L1 5595 5631 -1018 * 2265 93 3 0 chr20 3999833 4000124 -68153758 + AluSg1 SINE Alu 1 292 -17 2002 134 100 3 chr20 4000124 4000474 -68153408 + L1PA15 LINE L1 5777 6160 -5 1768 243 115 38 chr20 4000474 4000552 -68153330 + L1ME2 LINE L1 5631 5702 -947 1861 176 3 7 chr20 4000552 4000854 -68153028 - AluJb SINE Alu -11 301 1 1768 243 115 38 chr20 4000854 4001559 -68152323 + L1ME2 LINE L1 5702 6645 -4 475 301 121 27 chr20 4001586 4001918 -68151964 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 4001958 4002008 -68151874 + (TA)n Simple_repeat Simple_repeat 2 54 0 1963 119 0 58 chr20 4002009 4002320 -68151562 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 4002967 4003388 -68150494 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 4003538 4003564 -68150318 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 4003664 4003890 -68149992 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 4004378 4004510 -68149372 - LTR16A LTR ERVL -103 347 237 2532 52 0 0 chr20 4004510 4004801 -68149081 - AluY SINE Alu -20 291 1 508 250 190 33 chr20 4004801 4004968 -68148914 - LTR16A LTR ERVL -213 237 1 1244 283 50 6 chr20 4005084 4005445 -68148437 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 4005515 4005564 -68148318 + (TA)n Simple_repeat Simple_repeat 1 48 0 582 185 8 39 chr20 4005564 4005694 -68148188 - FLAM_C SINE Alu -15 128 3 245 164 36 0 chr20 4005720 4005775 -68148107 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 4005821 4006383 -68147499 - L2 LINE L2 -2203 1111 468 926 203 143 45 chr20 4006428 4006694 -68147188 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 4006873 4006956 -68146926 + AT_rich Low_complexity Low_complexity 1 83 0 405 0 0 0 chr20 4007328 4007373 -68146509 + (CA)n Simple_repeat Simple_repeat 2 46 0 2246 95 7 0 chr20 4007379 4007675 -68146207 - AluSq SINE Alu -15 298 1 4526 169 54 88 chr20 4007872 4007941 -68145941 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 4007941 4008256 -68145626 - AluSx SINE Alu 0 313 1 4526 169 54 88 chr20 4008256 4009257 -68144625 - Charlie1 DNA MER1_type -70 2691 1658 3171 44 0 0 chr20 4009257 4009642 -68144240 - L1PA5 LINE L1 0 6154 5770 4526 169 54 88 chr20 4009642 4009700 -68144182 - Charlie1 DNA MER1_type -1103 1658 1600 1373 12 0 12 chr20 4009700 4009863 -68144019 - L1PA2 LINE L1 0 6155 5995 4526 169 54 88 chr20 4009863 4010236 -68143646 - Charlie1 DNA MER1_type -1161 1600 1 411 288 61 58 chr20 4010272 4010567 -68143315 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 4010543 4010851 -68143031 + L2 LINE L2 2809 3180 -133 * 261 289 81 62 chr20 4010912 4011234 -68142648 - L2 LINE L2 -1389 1925 1598 198 330 22 60 chr20 4011556 4011738 -68142144 - L2 LINE L2 -2202 1112 938 * 258 333 108 9 chr20 4011721 4011832 -68142050 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 4012213 4012359 -68141523 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 4012502 4012528 -68141354 + (TG)n Simple_repeat Simple_repeat 1 26 0 2773 10 0 0 chr20 4012810 4013111 -68140771 - AluY SINE Alu -10 301 1 2018 171 12 0 chr20 4013128 4013472 -68140410 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 4014008 4014048 -68139834 - MIR SINE MIR -5 257 218 369 176 0 39 chr20 4014274 4014376 -68139506 + C-rich Low_complexity Low_complexity 4 101 0 1707 144 0 36 chr20 4014386 4014664 -68139218 - AluJo SINE Alu -44 268 1 861 250 98 47 chr20 4014782 4015078 -68138804 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 4015165 4015467 -68138415 + AluSx SINE Alu 1 299 -13 1752 159 0 66 chr20 4015476 4015809 -68138073 + AluJb SINE Alu 1 311 -1 275 300 79 14 chr20 4016022 4016162 -68137720 - L1ME LINE L1 -418 5752 5604 243 0 0 0 chr20 4016222 4016249 -68137633 + (TGG)n Simple_repeat Simple_repeat 3 29 0 404 336 59 42 chr20 4016264 4016550 -68137332 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 4016786 4016812 -68137070 + AT_rich Low_complexity Low_complexity 1 26 0 2171 109 17 7 chr20 4016815 4017117 -68136765 + AluSq SINE Alu 5 309 -4 406 286 146 21 chr20 4017681 4017873 -68136009 - MIR SINE MIR 0 262 47 2201 100 0 3 chr20 4018116 4018417 -68135465 - AluSg SINE Alu -10 300 1 1256 199 101 38 chr20 4019957 4020045 -68133837 - MER2 DNA MER2_type -8 337 256 2134 101 3 3 chr20 4020045 4020343 -68133539 + AluSx SINE Alu 1 298 -14 1256 199 101 38 chr20 4020343 4020571 -68133311 - MER2 DNA MER2_type -89 256 1 274 231 56 28 chr20 4021102 4021210 -68132672 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 4021340 4021368 -68132514 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 4021531 4021554 -68132328 + AT_rich Low_complexity Low_complexity 1 23 0 1515 147 0 0 chr20 4021768 4021993 -68131889 + AluSq SINE Alu 1 225 -88 898 178 0 32 chr20 4021993 4022178 -68131704 - L1P LINE L1 -1290 4856 4678 475 230 35 18 chr20 4022597 4022710 -68131172 + L2 LINE L2 754 868 -2446 1386 218 62 87 chr20 4022724 4022931 -68130951 + LTR16A1 LTR ERVL 1 212 -245 457 206 124 0 chr20 4022931 4023028 -68130854 - MER81 DNA DNA -4 110 2 1386 218 62 87 chr20 4023028 4023289 -68130593 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 4023292 4023369 -68130513 + L2 LINE L2 880 962 -2352 555 306 43 14 chr20 4023376 4023585 -68130297 + L2 LINE L2 1290 1504 -1810 563 220 61 0 chr20 4023589 4023721 -68130161 + MER3 DNA MER1_type 1 140 -69 1870 238 88 13 chr20 4023723 4024248 -68129634 + L2 LINE L2 1931 2494 -820 1948 222 126 69 chr20 4024261 4024815 -68129067 - MLT1E LTR MaLR -6 587 2 251 235 0 0 chr20 4024822 4024873 -68129009 + L2 LINE L2 2507 2557 -757 507 345 132 20 chr20 4025126 4025765 -68128117 + L2 LINE L2 2583 3310 -3 2192 75 4 0 chr20 4026030 4026358 -68127524 - AluY SINE Alu 0 329 1 2550 19 7 10 chr20 4026715 4027024 -68126858 - AluY SINE Alu -3 308 1 1830 213 89 39 chr20 4029001 4029588 -68124294 + HAL1b LINE L1 351 966 -382 427 256 81 121 chr20 4029791 4030237 -68123645 - L1ME4a LINE L1 -96 6025 5598 318 259 173 7 chr20 4030163 4030302 -68123580 + HAL1b LINE L1 947 1108 -240 * 461 193 67 47 chr20 4030317 4030467 -68123415 + HAL1b LINE L1 1196 1348 0 373 172 32 11 chr20 4031757 4031850 -68122032 - L1MB3 LINE L1 -2 6181 6087 2693 108 31 7 chr20 4031858 4032283 -68121599 - L1MA4 LINE L1 -282 6018 5584 2138 78 0 7 chr20 4032760 4033070 -68120812 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 4033190 4033214 -68120668 + AT_rich Low_complexity Low_complexity 1 24 0 1621 158 14 7 chr20 4033454 4033745 -68120137 - AluJo SINE Alu -19 293 1 1227 198 20 4 chr20 4035576 4035824 -68118058 - L1MB3 LINE L1 0 6183 5932 362 302 47 13 chr20 4036036 4036185 -68117697 - L2 LINE L2 -220 3052 2899 2162 92 0 0 chr20 4036503 4036786 -68117096 + AluY SINE Alu 1 283 -28 1809 104 9 95 chr20 4037205 4037542 -68116340 + AluSx SINE Alu 1 308 -4 2075 109 6 10 chr20 4038336 4038647 -68115235 + AluSx SINE Alu 1 310 -2 239 239 90 45 chr20 4038981 4039048 -68114834 + L2 LINE L2 3185 3254 -18 2262 75 7 7 chr20 4039725 4040030 -68113852 + AluY SINE Alu 1 305 -6 1024 133 0 6 chr20 4040078 4040236 -68113646 + FRAM SINE Alu 1 153 -23 3249 204 19 13 chr20 4040252 4040879 -68113003 + MER82 DNA MER2_type 1 631 -22 2710 125 101 9 chr20 4040896 4041351 -68112531 - Tigger3(Golem) DNA MER2_type -2 3027 2531 253 260 0 0 chr20 4041355 4041405 -68112477 - Tigger3(Golem) DNA MER2_type -2969 60 11 1935 154 0 0 chr20 4041506 4041804 -68112078 + AluJo SINE Alu 1 298 -14 956 229 122 17 chr20 4041808 4042162 -68111720 - L1MC5 LINE L1 -311 7650 7260 * 1028 196 27 162 chr20 4042130 4042649 -68111233 - L1MC5 LINE L1 -902 7059 6611 1992 212 41 37 chr20 4042732 4042924 -68110958 - L1MC5 LINE L1 -1907 5901 5711 881 48 112 0 chr20 4042924 4043049 -68110833 - MER85 DNA T2_type 0 139 1 1992 212 41 37 chr20 4043049 4043417 -68110465 - L1MC5 LINE L1 -2097 5711 5339 512 358 87 22 chr20 4043428 4043844 -68110038 - L1MC5 LINE L1 -878 5268 4826 26 0 0 0 chr20 4043926 4043952 -68109930 + AT_rich Low_complexity Low_complexity 1 26 0 790 189 0 8 chr20 4044251 4044383 -68109499 + FLAM_A SINE Alu 1 131 -2 733 173 8 23 chr20 4044957 4045090 -68108792 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 4045090 4045116 -68108766 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr20 4045474 4045495 -68108387 + AT_rich Low_complexity Low_complexity 1 21 0 44 20 0 0 chr20 4046015 4046066 -68107816 + GC_rich Low_complexity Low_complexity 1 51 0 232 215 39 39 chr20 4046162 4046292 -68107590 + (CGGG)n Simple_repeat Simple_repeat 3 132 0 591 278 97 38 chr20 4046526 4046896 -68106986 - L1ME4a LINE L1 0 6121 5730 326 254 74 8 chr20 4046955 4047077 -68106805 - L1ME4a LINE L1 -93 6028 5899 572 234 90 27 chr20 4047248 4047344 -68106538 - L2 LINE L2 -1114 2200 2112 2013 115 0 7 chr20 4047344 4047656 -68106226 + AluSx SINE Alu 1 310 0 572 234 90 27 chr20 4047656 4047746 -68106136 - L2 LINE L2 -1202 2112 2001 542 257 137 7 chr20 4047776 4048076 -68105806 - L1ME4a LINE L1 -757 5389 5051 683 183 0 23 chr20 4048202 4048377 -68105505 + CT-rich Low_complexity Low_complexity 2 172 0 180 0 0 0 chr20 4048381 4048401 -68105481 + (TTTCC)n Simple_repeat Simple_repeat 5 24 0 537 183 0 0 chr20 4048726 4048819 -68105063 - AluJo/FRAM SINE Alu -12 300 208 274 146 0 0 chr20 4048820 4048861 -68105021 - AluSp SINE Alu -129 174 134 2047 123 0 3 chr20 4048861 4049162 -68104720 - AluSx SINE Alu -12 300 1 29 0 0 0 chr20 4049162 4049191 -68104691 + AT_rich Low_complexity Low_complexity 1 29 0 2411 52 0 0 chr20 4049203 4049494 -68104388 + AluY SINE Alu 5 295 -16 803 232 34 23 chr20 4049494 4049671 -68104211 + AluJo/FRAM SINE Alu 134 312 0 607 131 0 0 chr20 4049687 4049771 -68104111 + AluSg/x SINE Alu 209 292 -18 395 125 219 31 chr20 4049772 4049868 -68104014 - L1MB8 LINE L1 -10 6168 6055 784 81 16 49 chr20 4049868 4049991 -68103891 - AluSg/x SINE Alu -10 299 181 531 61 0 0 chr20 4050032 4050098 -68103784 + Alu SINE Alu 2 67 -243 1813 129 4 0 chr20 4050098 4050361 -68103521 - AluSq SINE Alu -49 264 1 970 102 0 0 chr20 4050361 4050489 -68103393 - AluJb SINE Alu -176 136 9 1563 188 10 0 chr20 4050894 4051192 -68102690 + AluJb SINE Alu 3 303 -9 2171 121 0 0 chr20 4051394 4051700 -68102182 - AluSx SINE Alu -1 311 6 1286 198 0 54 chr20 4051814 4051952 -68101930 - AluJo SINE Alu -11 301 157 2092 109 0 3 chr20 4051952 4052256 -68101626 - AluSg SINE Alu -6 304 2 1286 198 0 54 chr20 4052256 4052430 -68101452 - AluJo SINE Alu -155 157 6 1004 146 99 4 chr20 4052434 4052667 -68101215 + MER33 DNA MER1_type 39 293 -31 2210 93 3 0 chr20 4052667 4052967 -68100915 + AluSx SINE Alu 1 301 -11 292 40 40 20 chr20 4053064 4053114 -68100768 + (TTTTA)n Simple_repeat Simple_repeat 1 51 0 6821 17 1 0 chr20 4053114 4053876 -68100006 - L1PA3 LINE L1 -24 6131 5369 2102 98 7 3 chr20 4054571 4054878 -68099004 + AluSg SINE Alu 1 308 -2 300 261 45 11 chr20 4055298 4055386 -68098496 + MIR SINE MIR 55 145 -117 338 207 0 45 chr20 4055834 4055945 -68097937 + CT-rich Low_complexity Low_complexity 3 108 0 198 0 0 0 chr20 4057807 4057829 -68096053 + (T)n Simple_repeat Simple_repeat 1 22 0 358 266 117 33 chr20 4058210 4058424 -68095458 - Charlie8 DNA MER1_type -2185 232 1 378 0 0 0 chr20 4058976 4059018 -68094864 + (TG)n Simple_repeat Simple_repeat 1 42 0 204 293 84 89 chr20 4063585 4063978 -68089904 + L2 LINE L2 2379 2769 -545 219 88 0 0 chr20 4065282 4065316 -68088566 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 2160 115 0 0 chr20 4065926 4066222 -68087660 + AluSg SINE Alu 1 296 -14 189 190 0 103 chr20 4066502 4066560 -68087322 - MIR SINE MIR -94 168 117 190 264 23 46 chr20 4066986 4067073 -68086809 - MIR SINE MIR -59 149 65 205 250 21 0 chr20 4067219 4067267 -68086615 - L2 LINE L2 -15 3257 3209 1348 224 103 3 chr20 4067948 4068296 -68085586 - L1ME3 LINE L1 0 6162 5780 1329 114 0 0 chr20 4068305 4068481 -68085401 - AluSq SINE Alu -4 309 134 2271 107 0 3 chr20 4068481 4068772 -68085110 - AluSg SINE Alu -14 296 7 21 0 0 0 chr20 4068790 4068811 -68085071 + AT_rich Low_complexity Low_complexity 1 21 0 1615 118 78 0 chr20 4068811 4069081 -68084801 + AluSp SINE Alu 1 291 -22 216 0 0 0 chr20 4069081 4069105 -68084777 + (TA)n Simple_repeat Simple_repeat 2 25 0 1229 171 18 40 chr20 4069107 4069335 -68084547 - AluJb SINE Alu -4 308 86 1952 161 0 37 chr20 4069342 4069666 -68084216 - AluJo SINE Alu 0 312 1 476 206 10 0 chr20 4069749 4069846 -68084036 - L1ME1 LINE L1 -31 6135 6038 481 262 60 0 chr20 4069884 4070033 -68083849 - L1ME3 LINE L1 -512 5652 5495 2334 108 0 0 chr20 4070043 4070350 -68083532 + AluSx SINE Alu 2 308 -4 2397 76 0 13 chr20 4070350 4070653 -68083229 + AluY SINE Alu 1 299 -12 606 259 7 0 chr20 4071816 4071959 -68081923 + MIR SINE MIR 82 225 -37 654 227 0 0 chr20 4071961 4072089 -68081793 + FLAM_C SINE Alu 1 128 -5 2579 59 0 3 chr20 4072093 4072400 -68081482 + AluY SINE Alu 1 306 -5 1415 162 55 28 chr20 4072601 4072891 -68080991 + AluJo SINE Alu 1 298 -14 2011 148 3 16 chr20 4073247 4073557 -68080325 + AluJb SINE Alu 1 306 -6 805 207 0 55 chr20 4073668 4073832 -68080050 + FAM SINE Alu 1 155 -30 432 0 0 0 chr20 4073836 4073884 -68079998 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1815 166 7 17 chr20 4073937 4074057 -68079825 + AluJb SINE Alu 1 121 -191 2391 46 43 0 chr20 4074057 4074338 -68079544 - AluY SINE Alu -17 294 2 1815 166 7 17 chr20 4074338 4074518 -68079364 + AluJb SINE Alu 121 298 -14 219 36 0 0 chr20 4074816 4074844 -68079038 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2198 122 7 0 chr20 4074972 4075268 -68078614 + AluSx SINE Alu 1 298 -14 208 213 27 107 chr20 4075464 4075539 -68078343 - MIR SINE MIR -9 253 185 203 310 55 41 chr20 4075880 4076025 -68077857 + L2 LINE L2 2913 3059 -213 2435 31 45 3 chr20 4076478 4076766 -68077116 - AluY SINE Alu -11 300 1 1884 246 53 28 chr20 4076846 4077283 -68076599 - L1ME3A LINE L1 -8 6162 5706 2398 94 0 3 chr20 4077283 4077592 -68076290 + AluSq SINE Alu 1 308 -5 1884 246 53 28 chr20 4077592 4077720 -68076162 - L1ME3A LINE L1 -464 5706 5583 1084 186 27 9 chr20 4078660 4078880 -68075002 + AluJb SINE Alu 1 224 -88 216 0 0 0 chr20 4078880 4078904 -68074978 + (A)n Simple_repeat Simple_repeat 1 24 0 189 121 0 0 chr20 4079020 4079053 -68074829 + (TGG)n Simple_repeat Simple_repeat 1 33 0 235 329 13 0 chr20 4079499 4079578 -68074304 + MER5A DNA MER1_type 92 171 -18 22 35 0 0 chr20 4079731 4079760 -68074122 + GC_rich Low_complexity Low_complexity 1 29 0 1021 238 75 79 chr20 4080541 4080848 -68073034 - L1MC4 LINE L1 -55 7987 7681 2170 110 20 3 chr20 4080848 4081149 -68072733 - AluSx SINE Alu -6 306 1 1021 238 75 79 chr20 4081149 4081333 -68072549 - L1MC4 LINE L1 -361 7681 7498 219 125 0 0 chr20 4081336 4081376 -68072506 + (T)n Simple_repeat Simple_repeat 1 40 0 891 242 12 48 chr20 4081984 4082232 -68071650 - MIR SINE MIR -4 258 20 2529 51 0 10 chr20 4082737 4083033 -68070849 - AluY SINE Alu -18 293 1 446 290 15 8 chr20 4083189 4083320 -68070562 + MIR SINE MIR 71 202 -60 2215 118 3 0 chr20 4084133 4084430 -68069452 + AluSx SINE Alu 1 298 -14 348 290 108 6 chr20 4085125 4085301 -68068581 - LTR16C LTR ERVL -144 347 154 183 234 39 65 chr20 4086257 4086334 -68067548 - L2 LINE L2 -4 3309 3235 2078 112 11 0 chr20 4086746 4087043 -68066839 - AluY SINE Alu 0 300 1 2425 115 0 0 chr20 4087232 4087544 -68066338 - AluSx SINE Alu 0 312 1 4845 133 17 35 chr20 4087681 4088570 -68065312 - L1MC1 LINE L1 0 6333 5461 1173 127 6 0 chr20 4088570 4088735 -68065147 - AluSg/x SINE Alu -11 301 136 2257 123 0 0 chr20 4088737 4089038 -68064844 - AluSx SINE Alu -11 301 1 2490 155 26 90 chr20 4089038 4089392 -68064490 - L1MC1 LINE L1 -743 5403 5028 2050 130 17 13 chr20 4089392 4089692 -68064190 + AluJo SINE Alu 1 301 -11 2490 155 26 90 chr20 4089692 4089709 -68064173 - L1MC1 LINE L1 -1118 5028 5011 2475 73 7 0 chr20 4089709 4090010 -68063872 - AluSp SINE Alu -10 303 1 2490 155 26 90 chr20 4090010 4090386 -68063496 - L1MC1 LINE L1 -1135 5011 4612 2087 149 7 0 chr20 4090386 4090687 -68063195 - AluSx SINE Alu -9 303 1 2490 155 26 90 chr20 4090687 4090709 -68063173 - L1MC1 LINE L1 -1534 4612 4772 2575 67 0 13 chr20 4090709 4091022 -68062860 - AluY SINE Alu -2 309 1 2490 155 26 90 chr20 4091022 4091094 -68062788 - L1MC1 LINE L1 -1373 4773 4698 261 54 0 0 chr20 4091094 4091117 -68062765 + (TA)n Simple_repeat Simple_repeat 2 27 -11 248 0 31 0 chr20 4091117 4091149 -68062733 + (TG)n Simple_repeat Simple_repeat 2 34 0 261 54 0 0 chr20 4091149 4091162 -68062720 + (TA)n Simple_repeat Simple_repeat 26 38 0 1388 171 102 4 chr20 4091162 4091408 -68062474 - AluJo SINE Alu -8 304 35 2239 117 10 3 chr20 4091439 4091739 -68062143 + AluSx SINE Alu 1 302 -10 2542 80 0 3 chr20 4091739 4092050 -68061832 + AluY SINE Alu 1 311 0 2122 145 0 3 chr20 4092097 4092393 -68061489 - AluSx SINE Alu -15 297 3 2367 91 0 3 chr20 4092399 4092696 -68061186 - AluSc SINE Alu -13 296 1 640 203 0 43 chr20 4092699 4092837 -68061045 - AluJo/FLAM SINE Alu -169 133 2 1768 224 41 24 chr20 4092840 4093375 -68060507 - L1 LINE L1 -1818 4328 3695 762 81 0 0 chr20 4093375 4093486 -68060396 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 654 123 0 9 chr20 4093487 4093593 -68060289 + AluSg/x SINE Alu 70 174 -138 1963 90 0 8 chr20 4093595 4093839 -68060043 - AluSx SINE Alu -70 242 1 257 301 65 8 chr20 4093843 4093966 -68059916 - L1MC/D LINE L1 -1921 5887 5758 2435 94 7 0 chr20 4094068 4094377 -68059505 + AluSp SINE Alu 1 311 -2 463 335 93 40 chr20 4094385 4094686 -68059196 - L1 LINE L1 -2987 3159 2843 2327 108 0 3 chr20 4094692 4094988 -68058894 + AluSq SINE Alu 1 295 -18 450 297 103 65 chr20 4095006 4095096 -68058786 - HAL1b LINE L1 -964 384 299 2494 65 10 7 chr20 4095096 4095404 -68058478 - AluSp SINE Alu -4 309 1 450 297 103 65 chr20 4095404 4095473 -68058409 - HAL1b LINE L1 -1049 299 234 2051 103 0 0 chr20 4095473 4095735 -68058147 - AluSc SINE Alu -12 297 36 450 297 103 65 chr20 4095735 4095864 -68058018 - HAL1b LINE L1 -1114 234 84 739 163 8 0 chr20 4096544 4096667 -68057215 + FLAM_C SINE Alu 1 124 -9 1786 147 0 99 chr20 4096683 4096870 -68057012 - AluSx SINE Alu -11 301 160 2400 79 33 0 chr20 4096870 4097173 -68056709 - AluSp SINE Alu 0 313 1 1786 147 0 99 chr20 4097173 4097319 -68056563 - AluSx SINE Alu -152 160 1 563 165 43 0 chr20 4097328 4097443 -68056439 - FLAM_A SINE Alu 0 142 23 21 0 0 0 chr20 4097452 4097473 -68056409 + AT_rich Low_complexity Low_complexity 1 21 0 2372 91 0 3 chr20 4097487 4097784 -68056098 + AluSx SINE Alu 1 296 -16 637 223 41 30 chr20 4097793 4097896 -68055986 - L1MB4 LINE L1 0 6180 6080 2421 107 0 0 chr20 4097896 4098205 -68055677 - AluSq SINE Alu -4 309 1 637 223 41 30 chr20 4098205 4098330 -68055552 - L1MB4 LINE L1 -100 6080 5957 226 299 83 42 chr20 4098690 4098834 -68055048 + L2 LINE L2 3163 3312 -1 2077 127 27 7 chr20 4099089 4099434 -68054448 + AluJb SINE Alu 1 351 0 1922 122 4 0 chr20 4099521 4099776 -68054106 + AluSx SINE Alu 1 256 -56 1881 112 37 44 chr20 4099876 4100172 -68053710 + AluSx SINE Alu 1 294 -18 960 194 10 41 chr20 4100209 4100335 -68053547 + AluJo SINE Alu 23 142 -170 2535 57 3 0 chr20 4100335 4100632 -68053250 + AluY SINE Alu 1 298 -13 960 194 10 41 chr20 4100632 4100701 -68053181 + AluJo SINE Alu 142 212 -100 1511 169 4 28 chr20 4100740 4100994 -68052888 - AluJb SINE Alu -64 248 1 337 256 6 106 chr20 4100996 4101084 -68052798 + L1ME3 LINE L1 6019 6114 -48 2223 75 7 55 chr20 4101084 4101391 -68052491 + AluSx SINE Alu 16 307 -5 2499 80 0 0 chr20 4101396 4101695 -68052187 + AluSc SINE Alu 1 299 -10 337 256 6 106 chr20 4101695 4101760 -68052122 + L1ME3 LINE L1 6118 6162 0 1201 129 12 0 chr20 4102545 4102708 -68051174 - AluSg/x SINE Alu -22 290 126 602 214 0 55 chr20 4102852 4102997 -68050885 + FLAM_A SINE Alu 6 142 0 1263 216 176 33 chr20 4103433 4103528 -68050354 - L1MC4a LINE L1 -6 7802 7722 2281 118 0 0 chr20 4103528 4103833 -68050049 - AluSq SINE Alu -8 305 1 1263 216 176 33 chr20 4103833 4104024 -68049858 - L1MC4a LINE L1 -86 7722 7560 679 198 71 85 chr20 4104024 4104072 -68049810 + MER3 DNA MER1_type 1 48 -161 2295 119 3 0 chr20 4104072 4104382 -68049500 + AluSp SINE Alu 1 311 -2 679 198 71 85 chr20 4104382 4104447 -68049435 + MER3 DNA MER1_type 48 112 -97 2533 93 0 0 chr20 4104447 4104759 -68049123 + AluSx SINE Alu 1 312 0 679 198 71 85 chr20 4104759 4104856 -68049026 + MER3 DNA MER1_type 112 209 0 1263 216 176 33 chr20 4104856 4104961 -68048921 - L1MC4a LINE L1 -248 7560 7354 2612 80 0 0 chr20 4105318 4105629 -68048253 + AluSx SINE Alu 1 311 -1 206 176 0 0 chr20 4105919 4105953 -68047929 - MIR SINE MIR -8 254 221 2322 92 3 0 chr20 4107589 4107881 -68046001 - AluSx SINE Alu -19 293 1 1150 261 116 62 chr20 4108193 4108690 -68045192 + L2 LINE L2 2294 2763 -550 2205 108 20 0 chr20 4108690 4108986 -68044896 - AluSq SINE Alu -11 302 1 1150 261 116 62 chr20 4108986 4109360 -68044522 + L2 LINE L2 2763 3250 -63 2649 49 10 0 chr20 4109479 4109786 -68044096 + AluY SINE Alu 1 310 -1 2294 69 31 3 chr20 4109798 4110087 -68043795 + AluSp SINE Alu 2 298 -15 2605 63 0 0 chr20 4110087 4110388 -68043494 + AluY SINE Alu 1 301 -10 1972 103 58 14 chr20 4110400 4110521 -68043361 + AluSx SINE Alu 1 115 -197 2099 142 0 22 chr20 4110521 4110839 -68043043 + AluSx SINE Alu 1 311 -1 1972 103 58 14 chr20 4110839 4111008 -68042874 + AluSx SINE Alu 115 304 -8 196 235 247 0 chr20 4111057 4111142 -68042740 - MIR SINE MIR -65 143 38 2347 106 3 7 chr20 4111156 4111457 -68042425 + AluSp SINE Alu 1 300 -13 2620 56 0 0 chr20 4111473 4111776 -68042106 - AluY SINE Alu -8 303 1 694 128 0 0 chr20 4112173 4112282 -68041600 - FLAM_A SINE Alu -4 138 30 2387 89 0 7 chr20 4112317 4112619 -68041263 - AluSg1 SINE Alu -7 302 3 2498 40 7 3 chr20 4112687 4112985 -68040897 + AluY SINE Alu 1 299 -12 1573 188 18 0 chr20 4112993 4113269 -68040613 + AluJo SINE Alu 1 281 -31 2166 97 7 36 chr20 4113270 4113579 -68040303 - AluSp SINE Alu -13 300 1 195 42 0 0 chr20 4113596 4113620 -68040262 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2202 108 7 13 chr20 4113622 4113927 -68039955 + AluSx SINE Alu 1 303 -9 2529 70 0 0 chr20 4114368 4114666 -68039216 - AluSc SINE Alu -7 302 5 1619 108 4 26 chr20 4115246 4115478 -68038404 - AluSg/x SINE Alu -4 306 80 417 115 0 0 chr20 4115478 4115539 -68038343 - Alu SINE Alu -16 295 235 2591 58 0 0 chr20 4115539 4115834 -68038048 - AluY SINE Alu -15 296 2 2054 111 42 3 chr20 4115835 4116124 -68037758 - AluSg SINE Alu -10 300 1 2494 83 0 6 chr20 4116233 4116547 -68037335 + AluSx SINE Alu 1 312 0 413 287 195 11 chr20 4116724 4116898 -68036984 + MIR SINE MIR 29 234 -28 478 303 0 19 chr20 4117401 4117556 -68036326 + MIR SINE MIR 30 181 -81 255 303 13 0 chr20 4117658 4117734 -68036148 + CT-rich Low_complexity Low_complexity 2 78 0 2175 90 47 13 chr20 4117879 4118179 -68035703 + AluY SINE Alu 1 310 -1 1999 153 33 0 chr20 4118270 4118571 -68035311 - AluJo SINE Alu -1 311 1 298 185 25 12 chr20 4118584 4118665 -68035217 + CT-rich Low_complexity Low_complexity 3 84 0 2425 73 0 16 chr20 4118707 4119010 -68034872 + AluSg SINE Alu 1 298 -12 2512 51 0 3 chr20 4119305 4119597 -68034285 - AluY SINE Alu -20 291 1 862 112 0 0 chr20 4119717 4119833 -68034049 - AluSg/x SINE Alu -21 291 176 2424 90 0 0 chr20 4119854 4120155 -68033727 - AluSp SINE Alu -12 301 1 2274 113 0 0 chr20 4120155 4120455 -68033427 - AluSg SINE Alu -10 300 1 1961 52 12 16 chr20 4120464 4120715 -68033167 - AluY SINE Alu -3 308 59 206 360 137 13 chr20 4122050 4122203 -68031679 - L2 LINE L2 -190 3082 2911 2299 89 7 0 chr20 4122208 4122517 -68031365 + AluSx SINE Alu 1 311 0 2372 69 14 0 chr20 4123087 4123378 -68030504 + AluSp SINE Alu 2 296 -17 2400 94 7 0 chr20 4123378 4123685 -68030197 + AluSx SINE Alu 1 309 -3 195 129 0 0 chr20 4124272 4124303 -68029579 + (A)n Simple_repeat Simple_repeat 1 31 0 2113 89 50 0 chr20 4124359 4124640 -68029242 + AluSq SINE Alu 2 296 -17 705 147 23 0 chr20 4124768 4124897 -68028985 - FLAM_A SINE Alu -1 132 1 257 167 0 0 chr20 4125603 4125645 -68028237 - AluSp SINE Alu -133 170 129 2152 110 7 3 chr20 4126174 4126475 -68027407 - AluSq SINE Alu -11 302 1 605 198 25 0 chr20 4127828 4127949 -68025933 - FLAM_C SINE Alu -8 125 2 1112 171 52 0 chr20 4128101 4128294 -68025588 - AluSq SINE Alu -110 203 1 21 0 0 0 chr20 4128297 4128318 -68025564 + AT_rich Low_complexity Low_complexity 1 21 0 1366 123 31 40 chr20 4128318 4128546 -68025336 - AluSx SINE Alu -86 226 1 1560 167 84 0 chr20 4128549 4128824 -68025058 - AluJb SINE Alu -14 298 1 351 271 76 0 chr20 4128825 4128943 -68024939 - MLT1B LTR MaLR -263 127 1 2387 85 3 0 chr20 4129107 4129401 -68024481 - AluSp SINE Alu -16 297 3 1413 216 35 47 chr20 4129401 4129803 -68024079 + MLT2C1 LTR ERVL 1 397 0 1405 131 0 10 chr20 4129891 4130089 -68023793 + AluSg/x SINE Alu 101 296 -16 1772 237 25 3 chr20 4130089 4130452 -68023430 + ERVL LTR ERVL 347 717 -5047 237 188 62 31 chr20 4130515 4130579 -68023303 - AluS SINE Alu -240 68 3 1078 192 103 48 chr20 4130582 4130873 -68023009 - MLT1A1 LTR MaLR -58 307 1 395 183 0 0 chr20 4130873 4130944 -68022938 + ERVL LTR ERVL 3883 3953 -1811 189 0 0 0 chr20 4131044 4131065 -68022817 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 481 274 107 13 chr20 4131065 4131299 -68022583 + L1ME4a LINE L1 5865 6120 -1 861 143 0 0 chr20 4132047 4132180 -68021702 + FLAM_C SINE Alu 1 133 0 348 259 43 76 chr20 4132344 4132484 -68021398 - L3 LINE CR1 -64 1513 1379 2007 96 70 0 chr20 4132484 4132755 -68021127 + AluY SINE Alu 1 290 -21 348 259 43 76 chr20 4132755 4132799 -68021083 - L3 LINE CR1 -198 1379 1335 23 33 0 0 chr20 4133218 4133248 -68020634 + AT_rich Low_complexity Low_complexity 1 30 0 2320 172 19 28 chr20 4133333 4133798 -68020084 + LOR1b LTR ERV1 1 461 0 2444 80 0 32 chr20 4134404 4134715 -68019167 - AluSg SINE Alu -9 301 1 289 309 44 16 chr20 4134776 4135040 -68018842 - L1ME3A LINE L1 -222 5948 5671 332 220 35 165 chr20 4135050 4135122 -68018760 - MER112 DNA MER1_type -6 254 174 378 0 0 0 chr20 4135122 4135164 -68018718 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 332 220 35 165 chr20 4135164 4135291 -68018591 - MER112 DNA MER1_type -86 174 81 443 313 75 0 chr20 4135331 4135491 -68018391 - L1ME3A LINE L1 -514 5648 5477 278 314 24 0 chr20 4135562 4135686 -68018196 - HAL1 LINE L1 -923 1584 1458 10706 147 28 11 chr20 4135814 4138845 -68015037 + L1MA2 LINE L1 3218 6304 0 21 57 0 0 chr20 4138932 4138967 -68014915 + AT_rich Low_complexity Low_complexity 1 35 0 4502 171 27 32 chr20 4139291 4139626 -68014256 + L1MB5 LINE L1 5149 5484 -690 2354 80 0 29 chr20 4139626 4139961 -68013921 + AluSc SINE Alu 1 309 0 4502 171 27 32 chr20 4139961 4140092 -68013790 + L1MB5 LINE L1 5484 5614 -560 474 56 11 124 chr20 4140092 4140142 -68013740 - MADE1 DNA Mariner 0 80 43 2354 71 3 14 chr20 4140142 4140439 -68013443 + AluY SINE Alu 1 294 -17 474 56 11 124 chr20 4140439 4140477 -68013405 - MADE1 DNA Mariner -37 43 2 4502 171 27 32 chr20 4140477 4141038 -68012844 + L1MB5 LINE L1 5614 6168 -6 1696 149 88 0 chr20 4141042 4141371 -68012511 + L1MB8 LINE L1 5550 5907 -271 804 97 8 32 chr20 4141476 4141600 -68012282 + LTR12 LTR ERV1 153 273 -441 398 224 10 0 chr20 4141603 4141701 -68012181 + LTR30 LTR ERV1 544 642 -80 2495 83 0 0 chr20 4141701 4142028 -68011854 + pTR5 LTR ERV1 66 392 -2046 265 98 115 66 chr20 4142052 4142113 -68011769 - L1MEd LINE L1 -5732 387 324 2829 181 79 140 chr20 4142120 4142824 -68011058 + MER21A LTR ERV1 12 757 -174 1955 163 0 3 chr20 4142824 4143125 -68010757 + AluJo SINE Alu 1 300 -12 2829 181 79 140 chr20 4143125 4143244 -68010638 + MER21A LTR ERV1 757 770 -161 1911 141 20 23 chr20 4143244 4143543 -68010339 + AluSx SINE Alu 1 298 -14 2829 181 79 140 chr20 4143543 4143691 -68010191 + MER21A LTR ERV1 770 925 -6 2110 212 27 93 chr20 4146704 4147078 -68006804 - L1MA5 LINE L1 0 6178 5882 1748 159 0 11 chr20 4147078 4147355 -68006527 - AluSx SINE Alu -36 276 3 2110 212 27 93 chr20 4147355 4147758 -68006124 - L1MA5 LINE L1 -296 5882 5454 * 3247 157 11 3 chr20 4147757 4148323 -68005559 - L1MA5 LINE L1 -1134 5012 4443 638 218 59 63 chr20 4149770 4150009 -68003873 + LTR37A LTR ERV1 67 304 -122 2260 116 3 0 chr20 4150064 4150357 -68003525 - AluSx SINE Alu -18 294 1 2435 71 3 0 chr20 4150462 4150757 -68003125 - AluY SINE Alu -15 296 1 515 250 45 34 chr20 4150767 4150943 -68002939 - MIR SINE MIR -43 219 42 905 138 0 0 chr20 4151500 4151623 -68002259 - FLAM_C SINE Alu -20 123 1 461 106 115 0 chr20 4151852 4151956 -68001926 + AluYb8 SINE Alu 10 125 -193 9111 177 79 23 chr20 4152084 4153811 -68000071 - L1M1 LINE L1 -5719 1846 24 25 0 0 0 chr20 4153816 4153841 -68000041 + AT_rich Low_complexity Low_complexity 1 25 0 647 269 63 86 chr20 4154688 4154844 -67999038 + L1ME4a LINE L1 5408 5566 -555 198 103 0 0 chr20 4154844 4154873 -67999009 + (TG)n Simple_repeat Simple_repeat 2 30 0 647 269 63 86 chr20 4154873 4155158 -67998724 + L1ME4a LINE L1 5566 5839 -282 714 264 83 74 chr20 4156055 4156624 -67997258 - HAL1 LINE L1 -943 1564 991 558 167 0 39 chr20 4156677 4156779 -67997103 - U6 snRNA snRNA 0 107 10 302 313 62 53 chr20 4157055 4157282 -67996600 - L1MEd LINE L1 -5446 673 445 2085 120 38 0 chr20 4157835 4158127 -67995755 - AluSx SINE Alu -7 305 3 21 57 0 0 chr20 4158891 4158926 -67994956 + AT_rich Low_complexity Low_complexity 1 35 0 285 335 73 33 chr20 4159685 4159930 -67993952 - L3 LINE CR1 -12 1565 1311 1444 235 67 45 chr20 4160137 4160600 -67993282 + HsTC2a DNA Tc2 11 483 -261 17007 127 32 120 chr20 4160601 4164557 -67989325 + L1P LINE L1 12 3621 -2525 1829 177 7 0 chr20 4164844 4165143 -67988739 + AluJo SINE Alu 1 301 -11 2422 83 3 3 chr20 4165359 4165661 -67988221 + AluSc SINE Alu 1 302 -7 2339 102 3 3 chr20 4166120 4166433 -67987449 - AluSp SINE Alu 0 313 1 201 255 82 117 chr20 4166567 4166632 -67987250 + L2 LINE L2 1792 1858 -1456 2150 110 14 0 chr20 4166632 4166923 -67986959 - AluSx SINE Alu -17 295 1 201 255 82 117 chr20 4166923 4167053 -67986829 + L2 LINE L2 1858 1980 -1334 191 311 16 0 chr20 4167658 4167719 -67986163 - L2 LINE L2 -1346 1968 1907 523 185 11 0 chr20 4167720 4167812 -67986070 - Tigger7 DNA MER2_type -5 2486 2394 1408 171 57 0 chr20 4167813 4168041 -67985841 - Tigger7 DNA MER2_type -2222 265 25 405 250 61 46 chr20 4168041 4168237 -67985645 - L1M4 LINE L1 -2057 4089 3891 2379 78 0 0 chr20 4168246 4168540 -67985342 - AluSx SINE Alu -18 294 1 2483 132 57 43 chr20 4168666 4169158 -67984724 + LTR8A LTR ERV1 83 581 -146 1303 118 11 21 chr20 4169158 4169345 -67984537 + AluY SINE Alu 1 185 -126 2566 138 37 24 chr20 4169468 4170012 -67983870 + L1 LINE L1 4136 4686 -1460 2430 97 0 0 chr20 4170012 4170322 -67983560 - AluSg SINE Alu 0 310 1 552 200 5 116 chr20 4170322 4170537 -67983345 + L1MD2 LINE L1 6038 6228 -131 * 908 151 104 0 chr20 4170531 4170723 -67983159 + L1PA16 LINE L1 5938 6149 -17 353 246 108 0 chr20 4170737 4170867 -67983015 + L1MD2 LINE L1 6214 6357 -2 212 300 146 27 chr20 4172000 4172110 -67981772 + L3 LINE CR1 1231 1353 -224 244 263 26 9 chr20 4172121 4172235 -67981647 + (TA)n Simple_repeat Simple_repeat 2 117 0 2420 77 0 3 chr20 4172267 4172565 -67981317 - AluSc SINE Alu -11 298 2 22 0 0 0 chr20 4172570 4172592 -67981290 + AT_rich Low_complexity Low_complexity 1 22 0 263 229 36 6 chr20 4172596 4172762 -67981120 + (TA)n Simple_repeat Simple_repeat 2 172 0 2088 124 3 10 chr20 4173204 4173502 -67980380 - AluSx SINE Alu -16 296 1 1056 215 124 43 chr20 4173686 4174058 -67979824 + MER92B LTR ERV1 2 403 -233 436 213 0 0 chr20 4174077 4174171 -67979711 + MER92B LTR ERV1 543 636 0 25 0 0 0 chr20 4174353 4174378 -67979504 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr20 4174818 4174846 -67979036 + AT_rich Low_complexity Low_complexity 1 28 0 534 270 60 75 chr20 4174964 4175216 -67978666 + MER102b DNA MER1_type 79 326 -15 442 236 156 47 chr20 4175492 4175704 -67978178 + MLT1H LTR MaLR 119 353 -196 312 179 40 11 chr20 4175749 4175855 -67978027 + MLT1H LTR MaLR 437 539 -10 189 0 0 0 chr20 4176026 4176047 -67977835 + (TG)n Simple_repeat Simple_repeat 2 22 0 300 290 153 6 chr20 4177342 4177518 -67976364 + MLT1K LTR MaLR 277 478 -110 2291 86 0 3 chr20 4177580 4177870 -67976012 + AluSx SINE Alu 1 289 -23 626 218 67 27 chr20 4178036 4178261 -67975621 - LTR16A1 LTR ERVL 0 457 224 362 228 24 31 chr20 4178316 4178443 -67975439 - LTR16A1 LTR ERVL -331 126 1 686 163 8 8 chr20 4178539 4178668 -67975214 + FRAM SINE Alu 40 168 -8 235 91 23 45 chr20 4178721 4178765 -67975117 - MLT1J LTR MaLR -378 133 91 198 272 112 32 chr20 4178819 4178944 -67974938 - MIR3 SINE MIR -41 167 33 1709 161 67 85 chr20 4180841 4181277 -67972605 + MSTA LTR MaLR 1 428 0 531 234 133 37 chr20 4181496 4181684 -67972198 - MIR SINE MIR -12 250 45 718 289 118 22 chr20 4182025 4182527 -67971355 + Charlie7 DNA MER1_type 12 561 -2051 353 307 125 66 chr20 4182899 4183218 -67970664 - HAL1 LINE L1 -1329 1178 841 2271 87 0 10 chr20 4183684 4183982 -67969900 - AluSq SINE Alu -13 300 6 2055 106 6 48 chr20 4184019 4184330 -67969552 - AluSq SINE Alu -15 298 1 204 67 0 0 chr20 4184584 4184614 -67969268 + (T)n Simple_repeat Simple_repeat 1 30 0 182 340 125 43 chr20 4185365 4185756 -67968126 - L2 LINE L2 -339 2975 2553 295 350 43 21 chr20 4185768 4185954 -67967928 - L2 LINE L2 -1285 2029 1840 216 292 99 109 chr20 4186240 4186432 -67967450 + L2 LINE L2 2632 2821 -493 1687 179 3 27 chr20 4186975 4187271 -67966611 + AluJo SINE Alu 1 289 -23 329 303 126 11 chr20 4187561 4187736 -67966146 - MIR SINE MIR -4 258 64 200 297 90 9 chr20 4188097 4188208 -67965674 + L2 LINE L2 2633 2752 -562 964 202 112 64 chr20 4188221 4188578 -67965304 + MLT1A2 LTR MaLR 1 374 0 2370 98 0 0 chr20 4188730 4189025 -67964857 - AluSq SINE Alu -18 295 1 208 315 18 45 chr20 4189074 4189185 -67964697 + L2 LINE L2 2988 3095 -218 1813 156 0 48 chr20 4189222 4189536 -67964346 - AluSx SINE Alu -13 299 1 1332 203 103 32 chr20 4189540 4189910 -67963972 + MLT1D LTR MaLR 108 503 -2 233 173 62 12 chr20 4192274 4192355 -67961527 + Charlie7 DNA MER1_type 2459 2543 -69 291 216 171 11 chr20 4192539 4192627 -67961255 - MIR SINE MIR -148 114 13 760 192 128 78 chr20 4193587 4194063 -67959819 + MLT1H LTR MaLR 5 545 -4 1862 137 4 11 chr20 4194210 4194481 -67959401 + AluSg SINE Alu 1 269 -41 272 320 109 34 chr20 4195044 4195191 -67958691 - L2 LINE L2 0 3272 3115 22 35 0 0 chr20 4195448 4195477 -67958405 + AT_rich Low_complexity Low_complexity 1 29 0 315 301 48 63 chr20 4196192 4196398 -67957484 + L2 LINE L2 1868 2070 -1244 21 36 0 0 chr20 4196915 4196943 -67956939 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 4197095 4197123 -67956759 + AT_rich Low_complexity Low_complexity 1 28 0 6655 179 34 40 chr20 4247657 4248314 -67905568 + L1MDa LINE L1 644 1303 -5237 2027 116 0 13 chr20 4248314 4248616 -67905266 + AluSx SINE Alu 1 298 -14 6655 179 34 40 chr20 4248616 4249352 -67904530 + L1MDa LINE L1 1303 2030 -4510 2245 100 3 6 chr20 4249352 4249663 -67904219 - AluSg SINE Alu 0 310 1 6655 179 34 40 chr20 4249663 4249757 -67904125 + L1MDa LINE L1 2030 2123 -4417 719 138 15 62 chr20 4249757 4249770 -67904112 - FLAM_C SINE Alu -175 137 125 2060 96 55 0 chr20 4249770 4250062 -67903820 - AluSc SINE Alu -1 308 1 719 138 15 62 chr20 4250062 4250178 -67903704 - FLAM_C SINE Alu -187 125 14 1443 139 60 168 chr20 4250178 4250221 -67903661 + L1MDa LINE L1 2117 2163 -4377 1979 90 0 4 chr20 4250221 4250488 -67903394 + AluSx SINE Alu 34 299 -13 2004 126 0 28 chr20 4250488 4250806 -67903076 + AluSg SINE Alu 1 309 -1 1443 139 60 168 chr20 4250806 4251385 -67902497 + L1MDa LINE L1 2161 2670 -3870 1032 158 0 0 chr20 4251386 4251550 -67902332 + FRAM SINE Alu 1 156 -20 4946 229 45 43 chr20 4251552 4253177 -67900705 + L1MDa LINE L1 2659 4287 -2253 2434 54 0 25 chr20 4253179 4253496 -67900386 + AluY SINE Alu 2 310 -1 2116 207 116 12 chr20 4253499 4253579 -67900303 + L1MB5 LINE L1 5022 5092 -1267 1298 283 59 14 chr20 4253579 4254003 -67899879 - LTR47B LTR ERVL 0 443 1 2116 207 116 12 chr20 4254003 4255111 -67898771 + L1MB5 LINE L1 5092 6356 -3 513 297 17 44 chr20 4255605 4255977 -67897905 - L2 LINE L2 -638 2676 2248 1553 132 4 24 chr20 4256656 4256907 -67896975 + AluJo SINE Alu 31 276 -36 24 0 0 0 chr20 4257019 4257043 -67896839 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr20 4257873 4257913 -67895969 + (TG)n Simple_repeat Simple_repeat 2 41 0 286 257 14 0 chr20 4258651 4258721 -67895161 + LTR16A1 LTR ERVL 1 71 -386 966 235 39 8 chr20 4258733 4258988 -67894894 + LTR16A1 LTR ERVL 181 443 -14 295 315 30 46 chr20 4259277 4259357 -67894525 - MIR SINE MIR -61 201 121 798 170 113 0 chr20 4259357 4259516 -67894366 + MER69A DNA AcHobo 1 177 0 295 315 30 46 chr20 4259516 4259617 -67894265 - MIR SINE MIR -141 121 28 1974 187 113 25 chr20 4259981 4260357 -67893525 - MLT1H LTR MaLR 0 549 122 1928 176 26 57 chr20 4260357 4260782 -67893100 + MLT2D LTR ERVL 3 414 0 1974 187 113 25 chr20 4260782 4260875 -67893007 - MLT1H LTR MaLR -427 122 39 1391 159 40 22 chr20 4261193 4261470 -67892412 + AluJo SINE Alu 1 282 -30 283 266 106 9 chr20 4262152 4262265 -67891617 + MIR SINE MIR 29 152 -110 1408 234 151 19 chr20 4262272 4262704 -67891178 + LTR16C LTR ERVL 3 491 0 474 256 0 17 chr20 4263401 4263518 -67890364 + MER58 DNA MER1_type 5 119 -96 533 261 158 24 chr20 4263911 4264164 -67889718 + LTR33A LTR ERVL 235 521 -2 872 209 70 25 chr20 4264268 4264469 -67889413 + MER58A DNA MER1_type 15 224 0 462 272 154 12 chr20 4264474 4264636 -67889246 + MER5A DNA MER1_type 5 189 0 851 233 221 9 chr20 4264875 4265192 -67888690 + L1MC4a LINE L1 5437 5820 -1988 24 0 0 0 chr20 4265214 4265238 -67888644 + AT_rich Low_complexity Low_complexity 1 24 0 543 186 15 0 chr20 4265632 4265643 -67888239 + MER5A DNA MER1_type 6 18 -171 247 250 225 17 chr20 4265643 4265763 -67888119 - MER5A DNA MER1_type -2 187 43 1051 168 45 27 chr20 4267325 4267545 -67886337 + AluJo SINE Alu 70 293 -19 1771 194 78 99 chr20 4267552 4268089 -67885793 + MLT1H LTR MaLR 24 549 0 316 242 0 0 chr20 4268580 4268646 -67885236 + MER117 DNA MER1_type 93 158 -39 1485 179 96 67 chr20 4268698 4268837 -67885045 - Charlie4a DNA MER1_type -1500 461 328 1507 128 121 11 chr20 4268837 4269102 -67884780 + AluSg1 SINE Alu 1 294 -15 1485 179 96 67 chr20 4269102 4269409 -67884473 - Charlie4a DNA MER1_type -1633 328 2 382 340 55 47 chr20 4270095 4270439 -67883443 + LTR16C LTR ERVL 121 467 -24 286 254 0 0 chr20 4270484 4270543 -67883339 - MIR SINE MIR -78 130 72 23 33 0 0 chr20 4271395 4271425 -67882457 + AT_rich Low_complexity Low_complexity 1 30 0 2694 26 0 7 chr20 4271431 4271735 -67882147 - AluY SINE Alu -9 302 1 29 0 0 0 chr20 4271830 4271859 -67882023 + AT_rich Low_complexity Low_complexity 1 29 0 1152 180 29 130 chr20 4272072 4272318 -67881564 + L1ME3A LINE L1 5743 5926 -244 1672 135 40 72 chr20 4272318 4272622 -67881260 + AluJo SINE Alu 1 294 -18 1152 180 29 130 chr20 4272622 4272820 -67881062 + L1ME3A LINE L1 5926 6142 -28 252 299 14 75 chr20 4273702 4273849 -67880033 + L1MC4a LINE L1 5797 5934 -1874 2345 103 0 3 chr20 4273902 4274214 -67879668 + AluY SINE Alu 1 311 0 232 64 0 128 chr20 4274469 4274516 -67879366 + Alu SINE Alu 256 296 -6 2320 123 0 0 chr20 4274645 4274954 -67878928 - AluSx SINE Alu -3 309 1 1155 188 48 27 chr20 4274978 4275212 -67878670 + Charlie4a DNA MER1_type 42 270 -1691 1684 197 63 21 chr20 4275212 4275424 -67878458 - MSTD LTR MaLR 0 396 160 2059 142 0 26 chr20 4275424 4275623 -67878259 - AluSx SINE Alu -10 302 112 2521 67 3 0 chr20 4275623 4275920 -67877962 + AluY SINE Alu 1 298 -13 2059 142 0 26 chr20 4275920 4276030 -67877852 - AluSx SINE Alu -200 112 1 1684 197 63 21 chr20 4276030 4276197 -67877685 - MSTD LTR MaLR -236 160 1 1155 188 48 27 chr20 4276197 4276255 -67877627 + Charlie4a DNA MER1_type 270 340 -168 1079 135 18 127 chr20 4276268 4276434 -67877448 - AluJb SINE Alu -25 287 151 2358 109 7 0 chr20 4276434 4276738 -67877144 - AluSp SINE Alu -7 306 1 1079 135 18 127 chr20 4276738 4276800 -67877082 - AluJb SINE Alu -161 151 84 434 233 26 0 chr20 4276805 4276921 -67876961 - L1MA8 LINE L1 0 6291 6173 3787 143 40 5 chr20 4276921 4277570 -67876312 - L1MA6 LINE L1 -13 6287 5616 663 231 14 0 chr20 4277579 4277722 -67876160 + Charlie4a DNA MER1_type 354 498 -10 2506 142 33 26 chr20 4278935 4279303 -67874579 - MSTC LTR MaLR -3 425 61 426 20 0 0 chr20 4279303 4279354 -67874528 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 2238 97 0 0 chr20 4279356 4279635 -67874247 - AluSc SINE Alu -30 279 1 2506 142 33 26 chr20 4279635 4279685 -67874197 - MSTC LTR MaLR -367 61 1 1383 242 170 52 chr20 4279836 4280636 -67873246 - L2 LINE L2 -24 3289 2370 2863 65 11 0 chr20 4280636 4280987 -67872895 + THE1A LTR MaLR 1 355 0 1383 242 170 52 chr20 4280987 4281020 -67872862 - L2 LINE L2 -943 2370 2342 2566 59 0 3 chr20 4281146 4281449 -67872433 + AluY SINE Alu 1 302 -9 851 206 16 0 chr20 4281462 4281646 -67872236 + L1ME2 LINE L1 5676 5862 -302 1084 184 0 11 chr20 4281724 4281909 -67871973 + AluJo SINE Alu 121 303 -9 501 294 100 12 chr20 4282758 4282918 -67870964 + LTR16C LTR ERVL 72 245 -246 * 547 184 9 9 chr20 4282917 4283031 -67870851 + LTR16C LTR ERVL 363 476 -15 272 270 0 0 chr20 4283291 4283354 -67870528 + MER117 DNA MER1_type 1 63 -134 378 347 41 14 chr20 4283580 4283727 -67870155 - MIR SINE MIR -84 178 28 1117 251 67 51 chr20 4284692 4285142 -67868740 - LTR16A1 LTR ERVL 0 457 1 2012 172 16 54 chr20 4285307 4285731 -67868151 + MLT2D LTR ERVL 7 414 0 227 298 193 0 chr20 4286680 4286794 -67867088 - MIR SINE MIR -79 183 48 23 0 0 0 chr20 4287052 4287075 -67866807 + AT_rich Low_complexity Low_complexity 1 23 0 943 226 74 36 chr20 4287138 4287475 -67866407 - L1ME3 LINE L1 -190 5972 5623 1777 181 70 79 chr20 4287537 4287855 -67866027 + MLT1C LTR MaLR 1 315 -152 2289 119 0 13 chr20 4287855 4288165 -67865717 + AluSx SINE Alu 1 306 -6 1777 181 70 79 chr20 4288165 4288317 -67865565 + MLT1C LTR MaLR 315 467 0 408 329 4 0 chr20 4288481 4288609 -67865273 - MIR SINE MIR -49 159 28 1479 132 106 0 chr20 4288997 4289232 -67864650 - AluJb SINE Alu -52 260 1 316 297 88 11 chr20 4289658 4289749 -67864133 - L2 LINE L2 -26 3246 3149 297 147 227 13 chr20 4289964 4290039 -67863843 - MIR SINE MIR -21 241 151 339 216 57 69 chr20 4290120 4290422 -67863460 + MLT1H LTR MaLR 151 409 0 569 248 90 0 chr20 4290430 4290563 -67863319 - MIR SINE MIR -116 146 2 336 228 8 16 chr20 4290600 4290727 -67863155 + (TA)n Simple_repeat Simple_repeat 1 126 0 740 268 111 34 chr20 4290735 4290775 -67863107 - L1ME3A LINE L1 -222 5948 5913 2174 109 3 0 chr20 4290775 4291089 -67862793 + AluSx SINE Alu 1 315 0 740 268 111 34 chr20 4291089 4291462 -67862420 - L1ME3A LINE L1 -257 5913 5502 427 279 22 0 chr20 4291462 4291598 -67862284 + LTR16A1 LTR ERVL 1 139 -318 209 213 0 21 chr20 4291754 4291801 -67862081 + GA-rich Low_complexity Low_complexity 3 48 0 228 167 0 0 chr20 4292601 4292649 -67861233 + (CA)n Simple_repeat Simple_repeat 2 49 0 604 213 8 8 chr20 4292807 4292929 -67860953 + MLT1D LTR MaLR 1 122 -383 1918 90 56 8 chr20 4292929 4293197 -67860685 + AluSx SINE Alu 21 301 -11 655 226 145 0 chr20 4293462 4293648 -67860234 - L1MD3 LINE L1 -378 7617 7405 24 0 0 0 chr20 4293657 4293681 -67860201 + AT_rich Low_complexity Low_complexity 1 24 0 722 200 0 36 chr20 4293681 4293821 -67860061 - FLAM_C SINE Alu -7 136 2 325 204 65 28 chr20 4293848 4293956 -67859926 - L1MD3 LINE L1 -792 7203 7092 460 221 159 0 chr20 4293962 4294075 -67859807 + MIR SINE MIR 121 251 -11 1035 135 29 92 chr20 4294422 4294629 -67859253 - AluJb SINE Alu -118 194 1 290 69 0 103 chr20 4294631 4294689 -67859193 + Tigger7 DNA MER2_type 2241 2292 -199 350 209 0 11 chr20 4294690 4294781 -67859101 + L1MD2 LINE L1 3861 3950 -2196 298 167 0 0 chr20 4294856 4294910 -67858972 - U6 snRNA snRNA -53 54 1 234 0 0 0 chr20 4294920 4294946 -67858936 + (T)n Simple_repeat Simple_repeat 1 26 0 288 0 0 0 chr20 4295034 4295066 -67858816 + (CA)n Simple_repeat Simple_repeat 2 33 0 1123 127 0 0 chr20 4295603 4295760 -67858122 - AluSq SINE Alu -13 300 144 2244 117 6 54 chr20 4295763 4296115 -67857767 + SVA Other Other 938 1272 -114 3171 134 49 28 chr20 4296115 4296644 -67857238 + LTR5 LTR ERVK 336 875 -94 6226 88 33 34 chr20 4296645 4298881 -67855001 - SVA Other Other -518 1386 33 5469 200 35 32 chr20 4298883 4299765 -67854117 + L1MD2 LINE L1 3941 4819 -1540 1811 172 3 16 chr20 4299765 4300068 -67853814 - AluJo SINE Alu -11 301 3 5469 200 35 32 chr20 4300068 4301263 -67852619 + L1MD2 LINE L1 4819 6040 -319 2138 105 0 3 chr20 4301263 4301578 -67852304 + AluSg SINE Alu 1 314 0 5469 200 35 32 chr20 4301578 4301899 -67851983 + L1MD2 LINE L1 6040 6359 0 1956 123 39 18 chr20 4302060 4302345 -67851537 + AluSq SINE Alu 1 291 -22 676 165 11 28 chr20 4302345 4302521 -67851361 + GA-rich Low_complexity Low_complexity 1 173 0 262 253 11 11 chr20 4302533 4302628 -67851254 + GA-rich Low_complexity Low_complexity 3 97 0 423 143 78 0 chr20 4303053 4303130 -67850752 + L1PB4 LINE L1 6066 6148 -8 2386 92 0 0 chr20 4303141 4303433 -67850449 + AluSx SINE Alu 2 293 -19 21 0 0 0 chr20 4303434 4303455 -67850427 + AT_rich Low_complexity Low_complexity 1 21 0 1934 128 54 10 chr20 4303514 4303811 -67850071 + AluJb SINE Alu 1 310 -2 1925 246 47 11 chr20 4304208 4304679 -67849203 + LTR16C LTR ERVL 2 489 -2 1011 238 22 11 chr20 4304700 4304969 -67848913 + L1ME1 LINE L1 5845 6116 -50 302 286 19 75 chr20 4305006 4305167 -67848715 - MIR3 SINE MIR -37 171 20 2131 221 128 27 chr20 4305343 4306017 -67847865 - HAL1 LINE L1 -701 1806 1039 219 69 0 0 chr20 4306017 4306046 -67847836 + (TG)n Simple_repeat Simple_repeat 2 30 0 2131 221 128 27 chr20 4306046 4306161 -67847721 - HAL1 LINE L1 -1468 1039 937 240 212 30 0 chr20 4307119 4307185 -67846697 - HAL1 LINE L1 -1593 914 847 1393 254 103 7 chr20 4307196 4307602 -67846280 + LTR16A1 LTR ERVL 4 448 -9 2061 255 98 45 chr20 4307606 4308411 -67845471 - HAL1 LINE L1 -1656 851 4 1706 141 0 12 chr20 4309215 4309488 -67844394 + AluSx SINE Alu 37 306 0 2464 82 0 3 chr20 4309489 4309794 -67844088 + AluSp SINE Alu 1 304 -9 820 314 24 14 chr20 4309795 4310085 -67843797 + LTR16C LTR ERVL 197 489 -2 2276 94 7 0 chr20 4310437 4310724 -67843158 + AluSg SINE Alu 10 298 -12 202 156 0 0 chr20 4311103 4311135 -67842747 - L2 LINE L2 -3 3269 3238 2459 88 3 0 chr20 4311313 4311619 -67842263 + AluSp SINE Alu 1 307 -6 196 224 245 41 chr20 4312488 4312586 -67841296 - L2 LINE L2 -31 3282 3165 1622 147 35 22 chr20 4312703 4313017 -67840865 - L1MC1 LINE L1 0 6333 6016 2322 100 3 0 chr20 4314267 4314566 -67839316 - AluSx SINE Alu -12 300 1 2564 49 0 16 chr20 4314645 4314952 -67838930 - AluY SINE Alu -9 302 1 37 52 0 0 chr20 4315130 4315188 -67838694 + GC_rich Low_complexity Low_complexity 1 58 0 25 31 0 0 chr20 4315324 4315356 -67838526 + GC_rich Low_complexity Low_complexity 1 32 0 342 0 0 0 chr20 4315967 4316005 -67837877 + (TG)n Simple_repeat Simple_repeat 1 38 0 2395 61 0 14 chr20 4316960 4317255 -67836627 + AluSq SINE Alu 1 291 -22 21 57 0 0 chr20 4317641 4317676 -67836206 + AT_rich Low_complexity Low_complexity 1 35 0 2148 122 0 28 chr20 4318293 4318614 -67835268 - AluSx SINE Alu 0 312 1 2561 206 137 48 chr20 4318757 4319690 -67834192 - HAL1 LINE L1 -121 2386 1371 329 154 125 140 chr20 4319701 4319837 -67834045 + MLT1G1 LTR MaLR 1 134 -461 2254 122 0 0 chr20 4320356 4320652 -67833230 - AluSg SINE Alu -14 296 1 396 0 0 0 chr20 4320652 4320696 -67833186 + (TTTG)n Simple_repeat Simple_repeat 4 47 0 1112 107 0 0 chr20 4320696 4320846 -67833036 - AluSg/x SINE Alu -32 280 131 23 0 0 0 chr20 4320880 4320903 -67832979 + AT_rich Low_complexity Low_complexity 1 23 0 685 313 132 38 chr20 4320987 4321540 -67832342 + L2 LINE L2 1214 1818 -1496 455 313 74 0 chr20 4321534 4321697 -67832185 + L2 LINE L2 3120 3294 -19 * 2344 83 3 3 chr20 4321900 4322188 -67831694 + AluSg1 SINE Alu 1 288 -21 665 36 100 0 chr20 4322188 4322437 -67831445 + (TA)n Simple_repeat Simple_repeat 1 273 0 733 222 78 39 chr20 4322447 4322677 -67831205 + MIR SINE MIR 24 262 0 1684 148 10 56 chr20 4322817 4323122 -67830760 - AluJb SINE Alu -21 291 1 2095 122 28 0 chr20 4324362 4324650 -67829232 - AluSx SINE Alu -16 296 1 239 301 240 0 chr20 4325498 4325644 -67828238 - MIR SINE MIR -54 208 28 789 211 95 81 chr20 4325903 4326331 -67827551 - MLT1D LTR MaLR -2 503 6 2391 100 0 6 chr20 4326800 4327111 -67826771 + AluSx SINE Alu 1 309 -3 2157 110 10 7 chr20 4327476 4327785 -67826097 + AluSg SINE Alu 1 310 0 21 36 0 0 chr20 4327943 4327971 -67825911 + AT_rich Low_complexity Low_complexity 1 28 0 2363 57 0 3 chr20 4328319 4328641 -67825241 - AluY SINE Alu 0 321 1 913 120 0 0 chr20 4328641 4328774 -67825108 - AluSg SINE Alu -177 133 1 1607 170 16 45 chr20 4328777 4329089 -67824793 - AluJo SINE Alu -9 303 1 2216 111 3 3 chr20 4329454 4329760 -67824122 - AluSx SINE Alu -6 306 1 2260 105 0 3 chr20 4330208 4330503 -67823379 - AluSq SINE Alu -19 294 1 1269 189 32 44 chr20 4330551 4330890 -67822992 - L1MB8 LINE L1 0 6178 5844 2276 99 3 3 chr20 4330959 4331272 -67822610 - AluSp SINE Alu 0 313 1 2134 136 3 0 chr20 4331636 4331946 -67821936 - AluSx SINE Alu -1 311 1 2296 85 0 32 chr20 4331959 4332140 -67821742 - AluSg SINE Alu -4 306 138 2436 99 0 0 chr20 4332140 4332452 -67821430 - AluSx SINE Alu 0 312 1 2296 85 0 32 chr20 4332452 4332586 -67821296 - AluSg SINE Alu -172 138 1 189 252 0 0 chr20 4332778 4332832 -67821050 + MIR SINE MIR 102 156 -52 1669 201 3 0 chr20 4333021 4333314 -67820568 + AluJb SINE Alu 3 296 -16 594 206 169 94 chr20 4333431 4333489 -67820393 - MLT1J LTR MaLR -19 492 440 2369 66 0 38 chr20 4333489 4333806 -67820076 - AluSc SINE Alu -4 305 1 594 206 169 94 chr20 4333806 4334184 -67819698 - MLT1J LTR MaLR -71 440 23 21 0 0 0 chr20 4334376 4334397 -67819485 + AT_rich Low_complexity Low_complexity 1 21 0 1189 140 144 0 chr20 4336659 4336916 -67816966 + L1MD3 LINE L1 7694 7987 -8 2212 110 3 0 chr20 4337158 4337450 -67816432 + AluSx SINE Alu 1 293 -19 435 274 47 1 chr20 4337450 4337590 -67816292 + MIR SINE MIR 46 191 -60 285 29 0 0 chr20 4338783 4338817 -67815065 + (TG)n Simple_repeat Simple_repeat 2 35 0 27 29 0 0 chr20 4338934 4338968 -67814914 + AT_rich Low_complexity Low_complexity 1 34 0 2182 117 0 3 chr20 4339198 4339497 -67814385 + AluY SINE Alu 6 303 -8 27 0 0 0 chr20 4339501 4339528 -67814354 + AT_rich Low_complexity Low_complexity 1 27 0 700 248 113 72 chr20 4339732 4339850 -67814032 - L1MC4a LINE L1 -1868 5940 5828 1419 191 3 66 chr20 4339850 4340169 -67813713 - AluJo SINE Alu -13 299 1 700 248 113 72 chr20 4340169 4340465 -67813417 - L1MC4a LINE L1 -1980 5828 5509 34 65 0 0 chr20 4340540 4340602 -67813280 + AT_rich Low_complexity Low_complexity 1 62 0 1148 275 42 21 chr20 4340784 4341170 -67812712 - MLT1I LTR MaLR 0 409 16 2616 55 0 0 chr20 4341228 4341535 -67812347 - AluY SINE Alu -4 307 1 313 250 81 32 chr20 4341652 4341776 -67812106 - L1MC4a LINE L1 -1543 4603 4474 1911 166 3 0 chr20 4341986 4342287 -67811595 + AluJo SINE Alu 1 302 -10 1866 190 0 3 chr20 4342394 4342704 -67811178 - AluJb SINE Alu -3 309 1 27 0 0 0 chr20 4342713 4342740 -67811142 + AT_rich Low_complexity Low_complexity 1 27 0 834 193 12 36 chr20 4343673 4343839 -67810043 + FRAM SINE Alu 1 162 -14 1835 113 0 16 chr20 4343839 4344095 -67809787 + AluSc SINE Alu 44 295 -14 1774 146 4 18 chr20 4344189 4344464 -67809418 + AluJb SINE Alu 2 272 -40 313 160 0 27 chr20 4344465 4344540 -67809342 + GA-rich Low_complexity Low_complexity 4 76 0 1606 74 34 176 chr20 4344692 4345045 -67808837 + AluSp SINE Alu 1 303 0 624 220 0 0 chr20 4345361 4345479 -67808403 + FLAM_A SINE Alu 5 122 -11 183 42 0 0 chr20 4345680 4345704 -67808178 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1412 183 102 25 chr20 4346482 4346766 -67807116 - AluJo SINE Alu -4 308 3 2464 94 0 0 chr20 4346779 4347086 -67806796 - AluSx SINE Alu -5 307 1 280 287 65 33 chr20 4347291 4347536 -67806346 + L1M4 LINE L1 4296 4532 -1614 1294 182 81 86 chr20 4347536 4347842 -67806040 - MSTD LTR MaLR -3 393 87 1616 188 3 24 chr20 4347842 4348140 -67805742 - AluJb SINE Alu -20 292 1 2354 86 0 10 chr20 4348148 4348449 -67805433 - AluSg SINE Alu -12 298 1 1294 182 81 86 chr20 4348449 4348528 -67805354 - MSTD LTR MaLR -316 80 1 280 287 65 33 chr20 4348528 4348589 -67805293 + L1M4 LINE L1 4532 4612 -1534 288 0 0 0 chr20 4348609 4348641 -67805241 + (GA)n Simple_repeat Simple_repeat 1 32 0 1622 163 42 0 chr20 4348644 4348908 -67804974 - AluJb SINE Alu -37 275 1 1365 98 0 11 chr20 4349056 4349240 -67804642 + AluSc SINE Alu 118 299 -10 338 317 140 27 chr20 4349269 4349455 -67804427 + L1M4 LINE L1 4882 5088 -1058 575 243 92 23 chr20 4349815 4350033 -67803849 - Charlie8 DNA MER1_type -2184 233 1 1206 201 67 16 chr20 4350129 4350383 -67803499 + Tigger7 DNA MER2_type 1 267 -466 413 198 0 0 chr20 4350390 4350471 -67803411 + Tigger7 DNA MER2_type 2411 2491 0 350 290 81 91 chr20 4350703 4351037 -67802845 - L1M4 LINE L1 -2947 3199 2869 2124 107 3 17 chr20 4351037 4351356 -67802526 - AluSq SINE Alu 0 315 1 350 290 81 91 chr20 4351356 4351561 -67802321 - L1M4 LINE L1 -3277 2869 2664 24 0 0 0 chr20 4351606 4351630 -67802252 + AT_rich Low_complexity Low_complexity 1 24 0 2092 95 50 0 chr20 4351638 4351921 -67801961 - AluSx SINE Alu -15 297 1 446 265 101 39 chr20 4351965 4352222 -67801660 - L1M4 LINE L1 -3706 2440 2168 803 115 79 6 chr20 4352223 4352388 -67801494 - L1MA4 LINE L1 -22 6278 6102 1822 99 122 0 chr20 4352409 4352672 -67801210 + AluSg SINE Alu 1 295 -5 489 200 54 8 chr20 4352679 4352809 -67801073 - L1MA4 LINE L1 -155 6145 6010 2461 57 3 0 chr20 4352863 4353161 -67800721 - AluY SINE Alu -12 299 1 315 237 0 92 chr20 4353597 4353728 -67800154 - HAL1b LINE L1 -819 529 450 1005 177 25 0 chr20 4353731 4353929 -67799953 - L1MD1 LINE L1 0 6636 6434 3285 160 21 5 chr20 4353941 4354548 -67799334 - L1MD1 LINE L1 -318 6318 5702 642 138 0 18 chr20 4354548 4354657 -67799225 - MLT1C LTR MaLR -7 460 354 1371 158 0 0 chr20 4354658 4354860 -67799022 + AluSx SINE Alu 1 202 -110 720 172 71 65 chr20 4354874 4355187 -67798695 - MLT1C LTR MaLR -113 354 2 8277 208 98 76 chr20 4355190 4357515 -67796367 - L1MD1 LINE L1 -841 5699 3428 2260 117 0 0 chr20 4357515 4357824 -67796058 - AluSq SINE Alu -4 309 1 2179 100 0 20 chr20 4357825 4358126 -67795756 - AluSx SINE Alu -17 295 1 8277 208 98 76 chr20 4358126 4359794 -67794088 - L1MD1 LINE L1 -3112 3428 1800 1426 112 0 0 chr20 4359794 4359981 -67793901 - AluSq SINE Alu -126 187 1 8277 208 98 76 chr20 4359981 4360763 -67793119 - L1MD1 LINE L1 -4740 1800 1037 1717 77 0 0 chr20 4360763 4360971 -67792911 + AluSc SINE Alu 88 295 -14 8277 208 98 76 chr20 4360971 4361470 -67792412 - L1MD1 LINE L1 -5503 1037 14 737 248 67 50 chr20 4361536 4361774 -67792108 - MIR SINE MIR 0 262 21 1569 197 7 30 chr20 4362118 4362418 -67791464 - AluJo SINE Alu -19 293 1 2131 96 17 3 chr20 4362430 4362721 -67791161 - AluSg SINE Alu -15 295 1 2178 96 51 0 chr20 4362738 4363030 -67790852 - AluSc SINE Alu -1 308 2 342 0 0 0 chr20 4364237 4364275 -67789607 + (CA)n Simple_repeat Simple_repeat 2 39 0 273 283 44 96 chr20 4364304 4364529 -67789353 - MIR3 SINE MIR -45 217 2 2216 125 3 3 chr20 4364582 4364893 -67788989 - AluSx SINE Alu -1 311 1 197 283 102 58 chr20 4365791 4365927 -67787955 + MIR SINE MIR 2 156 -52 1862 154 27 14 chr20 4365927 4366220 -67787662 + AluJb SINE Alu 1 297 -15 197 283 102 58 chr20 4366220 4366275 -67787607 + MIR SINE MIR 156 207 -1 295 211 53 66 chr20 4366505 4366581 -67787301 + L2 LINE L2 3239 3313 0 2270 115 0 0 chr20 4367252 4367556 -67786326 + AluSx SINE Alu 1 304 -8 2047 108 42 0 chr20 4367746 4368032 -67785850 + AluSq SINE Alu 1 298 -15 1682 180 7 11 chr20 4368367 4368674 -67785208 - AluJb SINE Alu 0 306 1 21 57 0 0 chr20 4369016 4369051 -67784831 + AT_rich Low_complexity Low_complexity 1 35 0 1769 186 17 0 chr20 4369324 4369625 -67784257 - AluJo SINE Alu -6 306 1 1913 104 86 7 chr20 4369652 4369931 -67783951 + AluSx SINE Alu 1 301 -11 2218 90 0 0 chr20 4370054 4370357 -67783525 - AluSc SINE Alu 0 303 1 402 244 33 11 chr20 4370828 4370918 -67782964 + L2 LINE L2 3222 3313 0 524 208 154 41 chr20 4370924 4371145 -67782737 + HAL1 LINE L1 2261 2506 -1 620 136 10 0 chr20 4371156 4371259 -67782623 + L1MA4 LINE L1 6184 6287 -13 499 334 156 53 chr20 4371320 4371803 -67782079 - L2 LINE L2 -715 2599 2167 2220 114 3 0 chr20 4371803 4372092 -67781790 + AluSx SINE Alu 1 290 -22 499 334 156 53 chr20 4372092 4372907 -67780975 - L2 LINE L2 -1147 2167 1167 32 0 0 0 chr20 4373242 4373274 -67780608 + AT_rich Low_complexity Low_complexity 1 32 0 1588 153 55 49 chr20 4373259 4373434 -67780448 - AluJb SINE Alu -2 310 131 2146 97 7 17 chr20 4373434 4373734 -67780148 - AluSx SINE Alu -15 297 1 1588 153 55 49 chr20 4373734 4373866 -67780016 - AluJb SINE Alu -181 131 1 819 210 56 80 chr20 4373994 4374456 -67779426 + L1ME3 LINE L1 2991 3441 -2705 4019 209 24 15 chr20 4374479 4375405 -67778477 + L1MB5 LINE L1 4012 4945 -1201 * 4307 170 56 12 chr20 4375402 4375828 -67778054 + L1MB5 LINE L1 5160 5566 -608 2083 109 17 3 chr20 4375828 4376122 -67777760 - AluSg SINE Alu -12 298 1 4307 170 56 12 chr20 4376122 4376650 -67777232 + L1MB5 LINE L1 5566 6155 -19 2236 98 3 0 chr20 4376689 4376985 -67776897 + AluSx SINE Alu 1 297 -15 1745 109 4 0 chr20 4377037 4377284 -67776598 + AluSg SINE Alu 55 302 -8 2179 83 7 7 chr20 4377293 4377594 -67776288 + AluY SINE Alu 1 301 -10 1857 248 184 55 chr20 4377648 4378734 -67775148 + L1ME3 LINE L1 3552 4777 -1369 2155 169 200 142 chr20 4378734 4379488 -67774394 + L1MC4a LINE L1 6678 7514 -294 2287 80 0 7 chr20 4379488 4379789 -67774093 + AluY SINE Alu 1 299 -12 2155 169 200 142 chr20 4379789 4380102 -67773780 + L1MC4a LINE L1 7514 7807 -1 1686 229 22 22 chr20 4380136 4380542 -67773340 - MLT1C LTR MaLR -3 464 59 1059 253 42 31 chr20 4380589 4380973 -67772909 + L1ME3 LINE L1 4780 5167 -979 1925 130 10 3 chr20 4381048 4381341 -67772541 - AluJb SINE Alu -17 295 1 2094 115 0 0 chr20 4381352 4381647 -67772235 - AluSx SINE Alu -17 295 1 2039 225 50 11 chr20 4381659 4382180 -67771702 + L1ME3 LINE L1 5616 6156 -6 2458 59 3 0 chr20 4382673 4382980 -67770902 - AluSp SINE Alu -5 308 1 2144 90 3 13 chr20 4383534 4383834 -67770048 - AluSc SINE Alu -12 297 1 1211 100 45 68 chr20 4384032 4384252 -67769630 - AluJb SINE Alu -11 301 87 1701 134 48 4 chr20 4384264 4384560 -67769322 - AluJb SINE Alu 0 308 1 2276 97 0 0 chr20 4385012 4385312 -67768570 - AluSq SINE Alu -13 300 1 21 57 0 0 chr20 4386358 4386393 -67767489 + AT_rich Low_complexity Low_complexity 1 35 0 2258 102 0 0 chr20 4386514 4386817 -67767065 - AluSx SINE Alu -9 303 1 1444 240 12 30 chr20 4387155 4387559 -67766323 - L1M4 LINE L1 -1253 5287 4891 * 2972 185 65 131 chr20 4387548 4387630 -67766252 - L1MDa LINE L1 -3660 2880 2794 2046 118 3 0 chr20 4387630 4387926 -67765956 + AluSq SINE Alu 2 298 -15 2972 185 65 131 chr20 4387926 4387972 -67765910 - L1MDa LINE L1 -3746 2794 2747 2375 52 0 3 chr20 4387972 4388260 -67765622 + AluY SINE Alu 1 287 -24 2972 185 65 131 chr20 4388260 4388276 -67765606 - L1MDa LINE L1 -3793 2747 2732 1827 169 0 0 chr20 4388276 4388571 -67765311 + AluJo SINE Alu 1 295 -17 2972 185 65 131 chr20 4388571 4388641 -67765241 - L1MDa LINE L1 -3808 2732 2659 2231 109 3 0 chr20 4388641 4388952 -67764930 - AluSx SINE Alu 0 312 1 2972 185 65 131 chr20 4388952 4389485 -67764397 - L1MDa LINE L1 -3881 2659 2092 1127 189 26 21 chr20 4389485 4389718 -67764164 + AluJb SINE Alu 64 297 -15 2972 185 65 131 chr20 4389718 4390486 -67763396 - L1MDa LINE L1 -4448 2092 1308 1823 161 3 0 chr20 4390487 4390779 -67763103 + AluSp SINE Alu 1 293 -20 3594 201 42 38 chr20 4390785 4391453 -67762429 + L1M4 LINE L1 4379 5043 -1103 760 181 8 0 chr20 4391453 4391580 -67762302 + FLAM_A SINE Alu 1 128 -5 3594 201 42 38 chr20 4391580 4391692 -67762190 + L1M4 LINE L1 5043 5153 -993 1630 132 16 55 chr20 4391692 4392003 -67761879 + AluJo SINE Alu 1 299 -13 3594 201 42 38 chr20 4392003 4392148 -67761734 + L1M4 LINE L1 5153 5309 -837 466 133 133 9 chr20 4392153 4392266 -67761616 - L1M4 LINE L1 -912 5234 5108 424 214 19 10 chr20 4392319 4392422 -67761460 - L1M4 LINE L1 -1199 4947 4844 * 4260 172 66 27 chr20 4392419 4393311 -67760571 + L1MB7 LINE L1 5240 6165 -19 2171 97 0 7 chr20 4393608 4393906 -67759976 + AluSc SINE Alu 1 296 -13 215 254 104 0 chr20 4394088 4394155 -67759727 - MIR SINE MIR -82 180 107 229 277 92 0 chr20 4394371 4394490 -67759392 - MIR SINE MIR -62 146 17 227 260 26 52 chr20 4394703 4394780 -67759102 - L2 LINE L2 -675 2639 2565 334 286 53 30 chr20 4394853 4394986 -67758896 + MIR3 SINE MIR 41 176 -32 209 224 20 0 chr20 4397601 4397650 -67756232 + CT-rich Low_complexity Low_complexity 2 51 0 216 0 0 0 chr20 4397657 4397681 -67756201 + (A)n Simple_repeat Simple_repeat 1 24 0 192 254 119 79 chr20 4400148 4400274 -67753608 + MIR SINE MIR 56 186 -76 1070 149 47 42 chr20 4401337 4401552 -67752330 - AluJo SINE Alu -16 296 81 2064 97 13 26 chr20 4401590 4401900 -67751982 + AluSx SINE Alu 1 306 -6 2332 66 30 0 chr20 4401967 4402269 -67751613 - AluY SINE Alu 0 311 1 2056 89 16 20 chr20 4403783 4404087 -67749795 - AluSx SINE Alu -9 303 1 203 305 49 12 chr20 4405120 4405202 -67748680 - L2 LINE L2 -1349 1965 1881 1963 109 11 0 chr20 4405211 4405495 -67748387 + AluSx SINE Alu 1 287 -25 352 254 71 40 chr20 4405633 4405759 -67748123 + MIR SINE MIR 23 152 -110 1829 137 13 7 chr20 4408736 4409035 -67744847 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr20 4409208 4409231 -67744651 + AT_rich Low_complexity Low_complexity 1 23 0 1734 63 5 0 chr20 4409470 4409692 -67744190 + L1PA5 LINE L1 5931 6153 -1 2220 91 7 0 chr20 4409883 4410180 -67743702 - AluSp SINE Alu -14 299 1 1994 104 19 35 chr20 4410199 4410515 -67743367 - AluSx SINE Alu -1 311 1 1831 149 3 23 chr20 4411536 4411844 -67742038 + AluSx SINE Alu 4 305 -7 255 328 54 32 chr20 4412568 4412754 -67741128 + L1ME LINE L1 5524 5713 -408 804 110 28 0 chr20 4413088 4413197 -67740685 - AluY SINE Alu -198 113 2 234 0 0 0 chr20 4413649 4413675 -67740207 + (TG)n Simple_repeat Simple_repeat 1 26 0 2028 108 0 0 chr20 4413675 4413953 -67739929 - AluSx SINE Alu -33 279 2 1281 211 192 53 chr20 4414466 4414935 -67738947 - MLT1H LTR MaLR 0 549 16 872 251 40 12 chr20 4419040 4419287 -67734595 + MIR SINE MIR 9 262 0 1271 113 35 15 chr20 4419312 4419515 -67734367 + AluJo SINE Alu 90 296 -16 2046 118 3 0 chr20 4420258 4420554 -67733328 + AluSx SINE Alu 1 297 -15 1002 149 0 39 chr20 4420620 4420801 -67733081 + AluSg/x SINE Alu 119 292 -18 1216 176 112 32 chr20 4420912 4421074 -67732808 - AluJo SINE Alu -8 304 156 2391 62 0 3 chr20 4421074 4421378 -67732504 - AluY SINE Alu -8 303 1 1216 176 112 32 chr20 4421378 4421493 -67732389 - AluJo SINE Alu -156 156 5 2124 105 10 0 chr20 4421505 4421809 -67732073 - AluSx SINE Alu -5 307 1 903 150 0 0 chr20 4422423 4422582 -67731300 + FLAM_C SINE Alu 1 159 0 495 214 23 30 chr20 4422655 4422786 -67731096 - L1MC5 LINE L1 -51 7910 7781 2169 102 3 0 chr20 4422792 4423086 -67730796 - AluSq SINE Alu -18 295 1 508 217 19 0 chr20 4423809 4423915 -67729967 - MIR SINE MIR -25 237 130 1640 179 7 0 chr20 4424063 4424342 -67729540 + AluJo SINE Alu 1 281 -31 268 235 141 0 chr20 4424721 4424806 -67729076 - L2 LINE L2 -6 3307 3211 1628 249 70 50 chr20 4424993 4425067 -67728815 + L1ME3A LINE L1 5483 5554 -616 1750 181 27 51 chr20 4425067 4425156 -67728726 + MLT1A1 LTR MaLR 1 91 -274 1965 131 3 7 chr20 4425156 4425453 -67728429 + AluSx SINE Alu 1 296 -16 1750 181 27 51 chr20 4425453 4425734 -67728148 + MLT1A1 LTR MaLR 91 362 -3 1628 249 70 50 chr20 4425734 4426258 -67727624 + L1ME3A LINE L1 5554 6093 -77 1289 195 80 33 chr20 4426279 4426725 -67727157 - MER89 LTR ERV1 0 559 3 183 319 0 0 chr20 4426900 4426947 -67726935 + L2 LINE L2 3001 3047 -225 1549 189 3 7 chr20 4427037 4427338 -67726544 + AluJo SINE Alu 1 300 -12 23 0 0 0 chr20 4427372 4427395 -67726487 + AT_rich Low_complexity Low_complexity 1 23 0 1675 172 7 7 chr20 4428267 4428569 -67725313 - AluJo SINE Alu -6 306 5 1213 253 43 16 chr20 4428652 4429003 -67724879 + L1MC4a LINE L1 5560 5923 -1885 1641 100 21 8 chr20 4429003 4429243 -67724639 + AluSc SINE Alu 1 243 -66 1213 253 43 16 chr20 4429243 4429262 -67724620 + L1MC4a LINE L1 5923 5940 -1868 544 122 55 216 chr20 4429284 4429318 -67724564 + L1MC5 LINE L1 6923 6961 -1000 2101 96 3 26 chr20 4429318 4429453 -67724429 + AluSg SINE Alu 1 138 -172 1968 72 14 51 chr20 4429453 4429770 -67724112 + AluY SINE Alu 3 308 0 2101 96 3 26 chr20 4429770 4429946 -67723936 + AluSg SINE Alu 138 306 -4 1993 122 7 0 chr20 4429948 4430243 -67723639 + AluSx SINE Alu 3 299 -13 544 122 55 216 chr20 4430243 4430460 -67723422 + L1MC5 LINE L1 6962 7136 -825 1846 124 3 14 chr20 4430460 4430742 -67723140 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr20 4430742 4430782 -67723100 + (CA)n Simple_repeat Simple_repeat 1 40 0 1612 151 0 25 chr20 4430960 4431239 -67722643 + AluJo SINE Alu 35 306 -6 2172 104 7 0 chr20 4431297 4431594 -67722288 + AluSp SINE Alu 1 299 -14 462 161 129 0 chr20 4431664 4431757 -67722125 - FLAM_A SINE Alu -18 124 20 2260 75 0 30 chr20 4431896 4432201 -67721681 + AluY SINE Alu 1 296 -15 1968 102 46 0 chr20 4432424 4432707 -67721175 - AluSx SINE Alu -16 296 1 2113 89 0 17 chr20 4432896 4433188 -67720694 - AluSg1 SINE Alu -20 289 3 549 110 12 12 chr20 4433192 4433274 -67720608 - AluSg/x SINE Alu -19 290 209 1776 159 7 0 chr20 4433493 4433789 -67720093 + AluJb SINE Alu 1 298 -14 2415 50 0 10 chr20 4433790 4434090 -67719792 + AluY SINE Alu 1 297 -14 1989 109 30 10 chr20 4434098 4434400 -67719482 + AluSx SINE Alu 1 308 -4 2065 89 0 0 chr20 4434539 4434808 -67719074 + AluSp SINE Alu 34 302 -11 263 351 123 9 chr20 4434907 4434931 -67718951 - L2 LINE L2 -449 2865 2845 2485 61 0 6 chr20 4434931 4435243 -67718639 + AluY SINE Alu 2 311 0 263 351 123 9 chr20 4435243 4435446 -67718436 - L2 LINE L2 -469 2845 2612 2536 46 0 0 chr20 4435497 4435802 -67718080 - AluY SINE Alu -4 307 3 1812 138 14 0 chr20 4435852 4436143 -67717739 - AluJb SINE Alu -17 295 1 1858 120 22 0 chr20 4436172 4436480 -67717402 + AluSx SINE Alu 1 314 0 2047 117 3 0 chr20 4437125 4437424 -67716458 - AluSx SINE Alu -12 300 1 2140 202 90 12 chr20 4437567 4438047 -67715835 + MLT1F LTR MaLR 14 530 -12 2371 70 3 0 chr20 4438292 4438594 -67715288 - AluY SINE Alu -8 303 1 34 24 0 0 chr20 4438596 4438637 -67715245 + AT_rich Low_complexity Low_complexity 1 41 0 414 198 119 8 chr20 4438705 4438831 -67715051 - L1ME3A LINE L1 -9 6161 6022 2134 118 0 3 chr20 4438846 4439151 -67714731 - AluSx SINE Alu -8 304 1 25 0 0 0 chr20 4439151 4439176 -67714706 + AT_rich Low_complexity Low_complexity 1 25 0 2065 96 6 25 chr20 4439206 4439520 -67714362 - AluSg SINE Alu -2 308 1 180 315 0 19 chr20 4439567 4439621 -67714261 + MIR SINE MIR 58 110 -98 904 111 131 0 chr20 4440137 4440290 -67713592 - AluSp SINE Alu -8 305 133 1660 149 6 43 chr20 4442942 4443265 -67710617 - AluJo SINE Alu -1 311 1 420 272 194 11 chr20 4443278 4443458 -67710424 - MIR SINE MIR -48 214 2 2057 101 10 26 chr20 4443959 4444266 -67709616 + AluSx SINE Alu 1 302 -10 1458 75 10 10 chr20 4444397 4444597 -67709285 + AluSg/x SINE Alu 98 297 -12 258 311 40 0 chr20 4444756 4444830 -67709052 + MER5A DNA MER1_type 76 152 -37 685 297 48 9 chr20 4444939 4445168 -67708714 - MIR SINE MIR -5 257 20 226 121 379 0 chr20 4445301 4445367 -67708515 - L1ME1 LINE L1 -4 6162 6072 2046 132 7 0 chr20 4445826 4446136 -67707746 - AluSq SINE Alu -1 312 1 2184 97 10 0 chr20 4446145 4446445 -67707437 - AluSp SINE Alu -10 303 1 1121 148 0 0 chr20 4446478 4446654 -67707228 - AluSg/x SINE Alu -6 306 131 1570 160 19 0 chr20 4446914 4447210 -67706672 + AluSx SINE Alu 13 313 0 835 136 0 102 chr20 4447211 4447388 -67706494 + AluJo SINE Alu 124 282 -30 204 40 0 0 chr20 4447390 4447415 -67706467 + (T)n Simple_repeat Simple_repeat 1 25 0 2156 73 0 54 chr20 4447968 4448283 -67705599 - AluY SINE Alu -13 298 1 3494 191 109 19 chr20 4448312 4449094 -67704788 + MER21B LTR ERV1 1 852 -11 1737 150 29 26 chr20 4449324 4449631 -67704251 + AluJb SINE Alu 1 308 -4 1944 118 14 7 chr20 4449632 4449921 -67703961 + AluSx SINE Alu 3 293 -19 343 273 188 13 chr20 4449941 4450095 -67703787 - L1M4 LINE L1 -2207 3939 3759 2047 122 7 0 chr20 4450098 4450401 -67703481 - AluSx SINE Alu -3 309 5 319 251 166 33 chr20 4450423 4450730 -67703152 - L1M4 LINE L1 -3116 3030 2683 2043 113 7 3 chr20 4450778 4451079 -67702803 - AluSg SINE Alu -8 302 1 1909 139 7 3 chr20 4451082 4451376 -67702506 - AluSx SINE Alu -17 295 1 2291 70 10 0 chr20 4451609 4451909 -67701973 - AluY SINE Alu -8 303 1 28 0 0 0 chr20 4452655 4452683 -67701199 + AT_rich Low_complexity Low_complexity 1 28 0 2013 96 0 4 chr20 4452684 4452955 -67700927 - AluSx SINE Alu -22 290 21 1446 163 48 4 chr20 4452959 4453253 -67700629 - AluJo SINE Alu 0 306 1 533 235 161 23 chr20 4453662 4453922 -67699960 - HAL1 LINE L1 -821 1686 1391 959 181 42 28 chr20 4454069 4454284 -67699598 - AluJo SINE Alu -9 303 86 406 156 16 0 chr20 4454285 4454349 -67699533 - AluSx SINE Alu -52 250 186 397 107 0 0 chr20 4454343 4454399 -67699483 - AluSx SINE Alu -162 141 86 * 1085 198 0 31 chr20 4454399 4454626 -67699256 - AluJo SINE Alu -92 220 1 305 242 0 21 chr20 4454782 4454807 -67699075 - L1MA10 LINE L1 -1 6333 6309 680 265 78 39 chr20 4454807 4454878 -67699004 - L1ME1 LINE L1 -15 6151 6084 414 0 0 0 chr20 4454878 4454924 -67698958 + (CA)n Simple_repeat Simple_repeat 2 47 0 680 265 78 39 chr20 4454924 4455044 -67698838 - L1ME1 LINE L1 -82 6084 5970 2087 123 0 10 chr20 4455044 4455353 -67698529 - AluSx SINE Alu -6 306 1 1473 121 6 118 chr20 4455359 4455537 -67698345 - AluSc SINE Alu 0 309 187 2094 108 0 3 chr20 4455537 4455832 -67698050 - AluSg SINE Alu -16 294 1 1473 121 6 118 chr20 4455832 4456001 -67697881 - AluSc SINE Alu -122 187 1 680 265 78 39 chr20 4456001 4456133 -67697749 - L1ME1 LINE L1 -200 5966 5807 263 203 105 105 chr20 4456153 4456204 -67697678 - L1MD2 LINE L1 -137 6222 6172 1439 186 47 10 chr20 4456204 4456505 -67697377 + AluJo SINE Alu 1 312 0 263 203 105 105 chr20 4456505 4456586 -67697296 - L1MD2 LINE L1 -186 6173 6090 2355 47 14 3 chr20 4457256 4457552 -67696330 - AluY SINE Alu -12 299 1 2162 91 3 3 chr20 4457623 4457921 -67695961 - AluSx SINE Alu -14 298 1 1414 149 45 128 chr20 4457975 4458048 -67695834 - MER47A DNA MER2_type -1957 366 289 1752 171 10 0 chr20 4458048 4458346 -67695536 + AluJb SINE Alu 1 301 -11 1414 149 45 128 chr20 4458346 4458669 -67695213 - MER47A DNA MER2_type -2034 289 3 2031 118 7 0 chr20 4458711 4459000 -67694882 - AluSc SINE Alu -18 291 1 1920 141 20 3 chr20 4459005 4459304 -67694578 - AluSx SINE Alu -8 304 1 2048 96 44 0 chr20 4460992 4461285 -67692597 - AluSp SINE Alu -7 306 1 905 105 0 0 chr20 4461312 4461436 -67692446 - AluSq/x SINE Alu -189 124 1 300 265 68 77 chr20 4461441 4461498 -67692384 - L1MC4a LINE L1 -1927 5881 5825 2121 100 0 13 chr20 4461498 4461797 -67692085 - AluSg SINE Alu -15 295 1 300 265 68 77 chr20 4461797 4461856 -67692026 - L1MC4a LINE L1 -1983 5825 5766 222 62 0 0 chr20 4462201 4462233 -67691649 + (T)n Simple_repeat Simple_repeat 1 32 0 2227 95 0 3 chr20 4463208 4463504 -67690378 + AluSg SINE Alu 1 295 -15 2146 96 7 0 chr20 4463515 4463808 -67690074 + AluSp SINE Alu 1 295 -18 1918 112 67 0 chr20 4464575 4464860 -67689022 + AluSg SINE Alu 1 304 -6 3828 187 88 60 chr20 4464887 4465254 -67688628 - L1MB7 LINE L1 0 6184 5829 1951 98 35 3 chr20 4465254 4465540 -67688342 - AluSp SINE Alu -18 295 1 3828 187 88 60 chr20 4465540 4465696 -67688186 - L1MB7 LINE L1 -355 5829 5679 2238 84 0 3 chr20 4465696 4465994 -67687888 - AluY SINE Alu -14 297 1 3828 187 88 60 chr20 4465994 4466225 -67687657 - L1MB7 LINE L1 -505 5679 5456 1305 186 61 7 chr20 4466225 4466504 -67687378 - AluJo SINE Alu -18 294 1 1730 147 3 36 chr20 4466509 4466815 -67687067 - AluSx SINE Alu -16 296 1 3828 187 88 60 chr20 4466815 4467201 -67686681 - L1MB7 LINE L1 -731 5453 5079 2391 64 3 0 chr20 4467201 4467498 -67686384 - AluSc SINE Alu -8 301 4 3828 187 88 60 chr20 4467498 4468175 -67685707 - L1MB7 LINE L1 -1105 5079 4308 22 35 0 0 chr20 4469555 4469584 -67684298 + AT_rich Low_complexity Low_complexity 1 29 0 4769 187 139 107 chr20 4469710 4469962 -67683920 + L1MDa LINE L1 285 527 -6013 1576 81 0 5 chr20 4469962 4470171 -67683711 - AluSc SINE Alu -14 295 88 4769 187 139 107 chr20 4470171 4470953 -67682929 + L1MDa LINE L1 527 1282 -5258 1352 112 0 0 chr20 4470953 4471140 -67682742 + AluSq SINE Alu 1 187 -126 4769 187 139 107 chr20 4471140 4472807 -67681075 + L1MDa LINE L1 1282 3349 -3191 2062 118 3 0 chr20 4472807 4473096 -67680786 + AluSx SINE Alu 1 290 -22 244 325 148 57 chr20 4473141 4473910 -67679972 - L2 LINE L2 -1309 2005 1167 1636 157 57 23 chr20 4474260 4474427 -67679455 - AluJb SINE Alu -2 310 127 2214 94 7 16 chr20 4474427 4474735 -67679147 - AluSx SINE Alu -7 305 1 1636 157 57 23 chr20 4474735 4474867 -67679015 - AluJb SINE Alu -185 127 1 769 209 62 74 chr20 4474995 4475430 -67678452 + L1MDa LINE L1 3385 3814 -2726 394 257 27 14 chr20 4475494 4475639 -67678243 + L1MDa LINE L1 4420 4560 -1980 2795 205 38 55 chr20 4475822 4476475 -67677407 - L1MDa LINE L1 -5883 657 16 391 331 77 14 chr20 4476933 4477220 -67676662 - L2 LINE L2 -666 2648 2344 531 233 8 8 chr20 4477647 4477767 -67676115 + L2 LINE L2 3193 3312 -1 2580 27 0 3 chr20 4478538 4478839 -67675043 - AluY SINE Alu -11 300 1 1341 199 112 38 chr20 4479452 4479819 -67674063 - MSTD LTR MaLR -2 394 1 2241 113 30 27 chr20 4479854 4480190 -67673692 - MER1B DNA MER1_type 0 337 1 2221 177 18 111 chr20 4480254 4480369 -67673513 + MER44D DNA MER2_type 1 125 -2362 2204 116 3 0 chr20 4480369 4480679 -67673203 + AluSx SINE Alu 1 311 -1 2221 177 18 111 chr20 4480679 4481166 -67672716 + MER44D DNA MER2_type 125 602 -3 201 74 0 0 chr20 4481954 4481981 -67671901 + (TA)n Simple_repeat Simple_repeat 1 27 0 230 192 19 0 chr20 4482000 4482052 -67671830 + LTR66 LTR ERVL 389 441 -169 337 190 0 130 chr20 4482075 4482175 -67671707 - L1MC4 LINE L1 -1342 6700 6614 * 430 267 0 0 chr20 4482171 4482261 -67671621 + L1MC4 LINE L1 6614 6703 -1339 425 221 28 0 chr20 4482265 4482371 -67671511 + L1MC4 LINE L1 1995 6983 -1339 386 311 0 0 chr20 4482291 4482381 -67671501 - L1MC4 LINE L1 -1339 6703 6614 * 308 196 0 0 chr20 4482372 4482423 -67671459 + L1MC4 LINE L1 6933 6983 -1339 * 418 203 32 32 chr20 4482426 4482549 -67671333 - MLT1H LTR MaLR 0 549 427 679 286 6 17 chr20 4482563 4482738 -67671144 - MLT1H LTR MaLR -271 278 106 1039 156 0 0 chr20 4482746 4482913 -67670969 - FRAM SINE Alu -9 167 1 474 172 149 0 chr20 4482918 4483005 -67670877 - MLT1H LTR MaLR -449 100 1 242 303 191 25 chr20 4483009 4483286 -67670596 + L2 LINE L2 2430 2752 -562 325 288 45 18 chr20 4483532 4483643 -67670239 - LTR67 LTR ERVL -288 269 156 385 248 205 24 chr20 4484209 4484463 -67669419 + LTR16A1 LTR ERVL 1 300 -157 1211 129 67 0 chr20 4484851 4485045 -67668837 - AluJo SINE Alu -10 302 96 194 335 181 11 chr20 4485360 4485542 -67668340 + L2 LINE L2 2599 2811 -503 397 136 0 0 chr20 4485542 4485601 -67668281 + AluS SINE Alu 1 59 -249 1428 92 0 5 chr20 4485601 4485796 -67668086 - AluSx SINE Alu -118 194 1 1424 238 24 84 chr20 4485796 4486245 -67667637 + MLT2B1 LTR ERVL 15 511 -43 189 107 0 0 chr20 4486245 4486273 -67667609 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 1424 238 24 84 chr20 4486273 4486308 -67667574 + MLT2B1 LTR ERVL 511 547 -7 1244 182 81 36 chr20 4486340 4486454 -67667428 - MER33 DNA MER1_type -2262 323 216 2153 103 3 0 chr20 4486454 4486746 -67667136 + AluSp SINE Alu 1 293 -20 1244 182 81 36 chr20 4486746 4486939 -67666943 - MER33 DNA MER1_type -2369 216 2 2081 115 10 0 chr20 4486969 4487265 -67666617 + AluSx SINE Alu 1 299 -13 879 213 66 5 chr20 4487514 4487711 -67666171 + L1MC/D LINE L1 47 255 -6141 262 286 13 0 chr20 4487719 4487796 -67666086 + L1MC/D LINE L1 656 733 -5663 2279 274 33 55 chr20 4487797 4488698 -67665184 + L1MC/D LINE L1 808 1681 -4715 1946 128 0 3 chr20 4488698 4489009 -67664873 + AluSg SINE Alu 1 310 0 2279 274 33 55 chr20 4489009 4489254 -67664628 + L1MC/D LINE L1 1681 1930 -4466 4759 208 49 66 chr20 4489289 4489344 -67664538 + L1MC/D LINE L1 3662 3716 -2499 1624 183 0 7 chr20 4489344 4489666 -67664216 - AluJb SINE Alu 0 320 1 4759 208 49 66 chr20 4489666 4489815 -67664067 + L1MC/D LINE L1 3716 3866 -2349 1800 55 0 0 chr20 4489815 4490032 -67663850 + AluY SINE Alu 1 217 -94 4759 208 49 66 chr20 4490032 4490603 -67663279 + L1MC/D LINE L1 3866 4445 -1770 387 0 0 0 chr20 4490603 4490646 -67663236 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2172 82 0 0 chr20 4490648 4490927 -67662955 - AluY SINE Alu -31 280 2 4759 208 49 66 chr20 4490927 4491652 -67662230 + L1MC/D LINE L1 4446 5143 -1072 1432 134 0 0 chr20 4491693 4491902 -67661980 - AluSq SINE Alu -104 209 1 702 209 65 44 chr20 4491904 4492199 -67661683 + L1MC/D LINE L1 5230 5526 -748 2382 73 0 0 chr20 4492205 4492507 -67661375 - AluSx SINE Alu -10 302 1 1931 183 38 60 chr20 4492554 4493023 -67660859 - MLT1C LTR MaLR -8 459 1 486 226 41 81 chr20 4493025 4493282 -67660600 + L1MC5 LINE L1 7238 7493 -519 743 182 38 44 chr20 4493314 4493473 -67660409 + FAM SINE Alu 1 158 -17 335 127 51 136 chr20 4493538 4493632 -67660250 - MER33 DNA MER1_type -2261 363 279 2297 92 3 9 chr20 4493632 4493947 -67659935 + AluSp SINE Alu 1 313 0 335 127 51 136 chr20 4493947 4493970 -67659912 - MER33 DNA MER1_type -2345 279 256 28 29 0 0 chr20 4493976 4494011 -67659871 + AT_rich Low_complexity Low_complexity 1 35 0 2037 217 133 16 chr20 4494058 4494556 -67659326 - MLT1E2 LTR MaLR -64 562 7 831 229 0 10 chr20 4494560 4494765 -67659117 - MER33 DNA MER1_type -121 203 1 371 301 75 49 chr20 4494765 4494991 -67658891 + L1MC4 LINE L1 7604 7835 -207 1659 219 30 30 chr20 4494991 4495398 -67658484 - LTR52 LTR ERVL -2 419 13 2232 89 3 0 chr20 4495401 4495704 -67658178 + AluSp SINE Alu 1 304 -9 873 217 6 0 chr20 4495724 4495881 -67658001 - LTR52-int LTR ERVL -1 3555 3398 554 220 28 44 chr20 4495891 4496073 -67657809 + L1M4 LINE L1 5150 5328 -818 600 191 14 7 chr20 4496079 4496220 -67657662 + L1 LINE L1 5190 5331 -815 2281 86 10 0 chr20 4496220 4496521 -67657361 + AluSx SINE Alu 1 304 -8 6017 233 42 44 chr20 4496524 4497138 -67656744 - LTR52-int LTR ERVL -1895 1661 1047 2104 108 0 0 chr20 4497138 4497433 -67656449 + AluSx SINE Alu 1 295 -17 6017 233 42 44 chr20 4497433 4498481 -67655401 - LTR52-int LTR ERVL -2509 1047 3 2133 108 0 0 chr20 4498584 4498880 -67655002 + AluSx SINE Alu 1 296 -16 1794 143 7 23 chr20 4499152 4499460 -67654422 + AluJo SINE Alu 1 303 -9 1989 116 0 0 chr20 4499482 4499758 -67654124 + AluSg SINE Alu 1 276 -34 198 0 0 0 chr20 4499761 4499783 -67654099 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 600 273 42 0 chr20 4499783 4499948 -67653934 + LTR52-int LTR ERVL 295 466 -3090 495 216 30 82 chr20 4499981 4500036 -67653846 + MIR SINE MIR 92 148 -114 2352 139 21 3 chr20 4500036 4500418 -67653464 - MLT1B LTR MaLR 0 390 2 495 216 30 82 chr20 4500418 4500496 -67653386 + MIR SINE MIR 148 218 -44 834 181 7 0 chr20 4500534 4500683 -67653199 - FRAM SINE Alu -26 150 1 231 146 0 0 chr20 4500693 4500734 -67653148 + (TC)n Simple_repeat Simple_repeat 2 42 0 1988 102 18 0 chr20 4500734 4501008 -67652874 - AluSx SINE Alu -32 280 2 540 158 338 0 chr20 4501276 4501409 -67652473 + MER5A DNA MER1_type 3 180 -9 229 279 79 50 chr20 4501508 4501648 -67652234 + L2 LINE L2 2614 2757 -557 525 335 56 19 chr20 4501727 4501942 -67651940 + MIR SINE MIR 24 246 -16 281 221 65 0 chr20 4502060 4502137 -67651745 + LTR16C LTR ERVL 71 152 -339 301 176 0 0 chr20 4502145 4502196 -67651686 + MIR SINE MIR 132 182 -80 639 210 123 0 chr20 4502884 4503022 -67650860 - MER45A DNA AcHobo -23 155 1 1132 204 133 31 chr20 4503474 4503924 -67649958 + LTR33 LTR ERVL 24 519 -2 265 381 8 0 chr20 4504233 4504351 -67649531 + (CAGG)n Simple_repeat Simple_repeat 1 119 0 484 292 119 0 chr20 4504604 4504789 -67649093 + MLT1K LTR MaLR 376 582 -6 269 308 33 0 chr20 4504889 4504980 -67648902 + MIR SINE MIR 39 132 -76 563 226 178 51 chr20 4505250 4505542 -67648340 + MLT1K LTR MaLR 212 540 -48 985 195 5 5 chr20 4505694 4505879 -67648003 + MER5A DNA MER1_type 3 187 -2 242 212 44 97 chr20 4505928 4506041 -67647841 + LTR16A1 LTR ERVL 20 126 -331 366 240 4 0 chr20 4506648 4506899 -67646983 + (TG)n Simple_repeat Simple_repeat 1 252 0 444 219 32 45 chr20 4507236 4507391 -67646491 + L1ME4a LINE L1 5967 6119 -2 1560 241 138 95 chr20 4507566 4507755 -67646127 - L1MC4 LINE L1 -63 7979 7800 1975 129 0 3 chr20 4507755 4508049 -67645833 - AluSx SINE Alu -19 293 1 1560 241 138 95 chr20 4508049 4509463 -67644419 - L1MC4 LINE L1 -242 7800 6448 787 143 0 30 chr20 4509463 4509596 -67644286 - FLAM_C SINE Alu -4 129 1 1560 241 138 95 chr20 4509596 4510039 -67643843 - L1MC4 LINE L1 -1594 6448 6025 2465 156 21 12 chr20 4510039 4510461 -67643421 - MSTB LTR MaLR 0 426 1 1560 241 138 95 chr20 4510461 4510612 -67643270 - L1MC4 LINE L1 -2017 6025 5593 483 63 0 0 chr20 4511177 4511240 -67642642 + (TTC)n Simple_repeat Simple_repeat 1 63 0 1905 136 33 0 chr20 4511243 4511721 -67642161 - AluSq SINE Alu 0 488 1 645 318 161 35 chr20 4511771 4511887 -67641995 - L2 LINE L2 -605 2709 2609 2005 131 0 0 chr20 4511887 4512192 -67641690 - AluSq SINE Alu -4 309 5 645 318 161 35 chr20 4512192 4512794 -67641088 - L2 LINE L2 -705 2609 1853 2153 68 0 24 chr20 4512794 4513087 -67640795 + AluSc SINE Alu 1 286 -23 645 318 161 35 chr20 4513087 4513269 -67640613 - L2 LINE L2 -1461 1853 1695 1995 125 3 0 chr20 4513281 4513577 -67640305 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 4513837 4513858 -67640024 + AT_rich Low_complexity Low_complexity 1 21 0 1249 96 0 11 chr20 4514668 4514846 -67639036 + FRAM SINE Alu 1 176 0 769 167 48 0 chr20 4514860 4515014 -67638868 + FLAM_C SINE Alu 2 161 0 2195 92 3 3 chr20 4515190 4515484 -67638398 + AluSc SINE Alu 1 294 -15 1564 151 0 89 chr20 4516126 4516450 -67637432 + AluJo SINE Alu 1 295 -17 429 276 58 1 chr20 4516637 4516754 -67637128 + MLT1J LTR MaLR 59 218 -286 836 169 0 0 chr20 4517006 4517148 -67636734 - FLAM_C SINE Alu -1 142 1 1889 123 0 36 chr20 4517197 4517506 -67636376 - AluSx SINE Alu -1 311 14 695 100 9 0 chr20 4517564 4517674 -67636208 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 340 137 0 0 chr20 4517674 4517725 -67636157 + (TTTC)n Simple_repeat Simple_repeat 3 53 0 1562 179 11 0 chr20 4517725 4517998 -67635884 - AluJb SINE Alu -36 276 1 1761 154 3 7 chr20 4518001 4518329 -67635553 - AluSx SINE Alu 0 327 1 1926 104 4 0 chr20 4518340 4518608 -67635274 - AluSc SINE Alu -11 298 30 1050 311 58 22 chr20 4518681 4519444 -67634438 - L1M4 LINE L1 -2007 4139 3350 1667 142 46 0 chr20 4519552 4519834 -67634048 - AluSx SINE Alu -17 295 1 314 333 6 54 chr20 4519835 4520003 -67633879 - L1M4 LINE L1 -2984 3162 3003 1439 249 51 30 chr20 4520019 4520452 -67633430 - LTR16A1 LTR ERVL -15 442 1 574 130 130 26 chr20 4520482 4520597 -67633285 + FLAM_C SINE Alu 10 136 -7 244 294 51 65 chr20 4520647 4520812 -67633070 - L1M4 LINE L1 -3184 2962 2796 2154 92 0 0 chr20 4520812 4521129 -67632753 - AluY SINE Alu 0 317 1 244 294 51 65 chr20 4521129 4521456 -67632426 - L1M4 LINE L1 -3350 2796 2476 453 268 61 37 chr20 4521515 4521761 -67632121 + L1MEc LINE L1 1532 1783 -4613 2241 101 7 0 chr20 4521819 4522126 -67631756 - AluSp SINE Alu -4 309 1 2234 193 56 39 chr20 4522380 4522508 -67631374 + L1ME1 LINE L1 5260 5384 -782 1972 135 0 14 chr20 4522508 4522805 -67631077 + AluSx SINE Alu 1 293 -19 2234 193 56 39 chr20 4522805 4522935 -67630947 + L1ME1 LINE L1 5384 5510 -656 1061 174 12 0 chr20 4522935 4523107 -67630775 + FAM SINE Alu 1 174 -1 2234 193 56 39 chr20 4523107 4523588 -67630294 + L1ME1 LINE L1 5510 6165 -1 26 0 0 0 chr20 4523921 4523947 -67629935 + AT_rich Low_complexity Low_complexity 1 26 0 2003 145 61 112 chr20 4524049 4524539 -67629343 + L1MC2 LINE L1 5871 6335 -9 550 148 59 0 chr20 4524543 4524644 -67629238 + HsTC2 DNA Tc2 1610 1716 -182 1813 166 3 3 chr20 4524683 4524985 -67628897 - AluJb SINE Alu -10 302 1 226 163 0 0 chr20 4525007 4525050 -67628832 + HsTC2 DNA Tc2 1856 1898 0 389 145 66 163 chr20 4525050 4525219 -67628663 + HsTC2 DNA Tc2 1715 1851 -47 2134 99 0 3 chr20 4525219 4525511 -67628371 + AluSg SINE Alu 6 296 -14 389 145 66 163 chr20 4525511 4525556 -67628326 + HsTC2 DNA Tc2 1851 1899 1 955 198 0 0 chr20 4525686 4525863 -67628019 - FRAM SINE Alu -1 175 1 364 221 55 47 chr20 4525865 4525992 -67627890 + L1ME4a LINE L1 5966 6093 -28 854 118 47 16 chr20 4526025 4526152 -67627730 + FLAM_C SINE Alu 1 131 -2 1380 204 28 11 chr20 4526282 4526533 -67627349 + L1MB4 LINE L1 5883 6141 -39 1346 138 142 4 chr20 4526533 4526640 -67627242 + AluJo SINE Alu 1 92 -220 273 57 0 0 chr20 4526640 4526675 -67627207 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1346 138 142 4 chr20 4526675 4526827 -67627055 + AluJo SINE Alu 92 296 -16 1380 204 28 11 chr20 4526827 4526860 -67627022 + L1MB4 LINE L1 6141 6172 -8 654 302 298 1 chr20 4526872 4527564 -67626318 - L2 LINE L2 -932 2382 1486 932 171 74 0 chr20 4527673 4527849 -67626033 + MER5A DNA MER1_type 1 189 0 185 211 19 0 chr20 4529047 4529099 -67624783 + CT-rich Low_complexity Low_complexity 2 54 0 877 134 8 0 chr20 4529897 4530031 -67623851 + AluJo SINE Alu 1 135 -177 2109 123 0 7 chr20 4530031 4530339 -67623543 + AluSp SINE Alu 1 306 -7 1965 126 0 46 chr20 4530370 4530695 -67623187 + AluSq SINE Alu 1 310 -3 357 189 0 14 chr20 4531010 4531084 -67622798 + MER53 DNA DNA 105 177 -12 7729 32 7 17 chr20 4531090 4532234 -67621648 - L1PA5 LINE L1 0 6154 5016 2820 13 0 0 chr20 4532234 4532551 -67621331 - AluYb8 SINE Alu -1 317 1 7729 32 7 17 chr20 4532551 4532749 -67621133 - L1PA5 LINE L1 -1138 5016 4818 2089 90 0 0 chr20 4532972 4533239 -67620643 + AluSq SINE Alu 1 267 -46 26 0 0 0 chr20 4533251 4533277 -67620605 + AT_rich Low_complexity Low_complexity 1 26 0 1649 102 0 8 chr20 4533295 4533531 -67620351 + AluSg/x SINE Alu 74 307 -5 302 214 258 0 chr20 4533531 4533610 -67620272 + MER5A DNA MER1_type 61 167 -22 393 316 58 36 chr20 4534355 4534579 -67619303 - MLT1H LTR MaLR -123 286 63 635 275 81 6 chr20 4534721 4535104 -67618778 + MLT1J2 LTR MaLR 3 450 0 305 280 137 30 chr20 4535282 4535450 -67618432 - MIR SINE MIR 0 262 77 456 179 60 0 chr20 4535776 4535860 -67618022 + MLT1C LTR MaLR 2 90 -377 311 244 16 57 chr20 4535874 4535997 -67617885 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 261 219 16 0 chr20 4536019 4536035 -67617847 + MER39 LTR ERV1 6 20 -911 279 0 0 0 chr20 4536035 4536066 -67617816 + (CA)n Simple_repeat Simple_repeat 2 32 0 261 219 16 0 chr20 4536066 4536113 -67617769 + MER39 LTR ERV1 20 70 -861 1709 170 28 96 chr20 4536217 4536816 -67617066 + MER39 LTR ERV1 71 565 -201 1721 196 45 45 chr20 4536877 4536899 -67616983 + MER21B LTR ERV1 449 470 -393 1947 120 21 0 chr20 4536899 4537190 -67616692 - AluSx SINE Alu -15 297 1 1721 196 45 45 chr20 4537190 4537449 -67616433 + MER21B LTR ERV1 470 734 -129 2114 106 3 0 chr20 4537449 4537763 -67616119 + AluSp SINE Alu 1 315 0 1721 196 45 45 chr20 4537763 4537883 -67615999 + MER21B LTR ERV1 733 852 -11 1301 170 92 60 chr20 4537892 4537985 -67615897 + MLT1C LTR MaLR 86 175 -292 1978 103 33 0 chr20 4537985 4538288 -67615594 + AluSg SINE Alu 1 312 0 2140 79 4 0 chr20 4538297 4538608 -67615274 + AluY SINE Alu 1 312 0 1301 170 92 60 chr20 4538608 4538872 -67615010 + MLT1C LTR MaLR 182 467 0 880 242 82 35 chr20 4538875 4539222 -67614660 + MLT1H LTR MaLR 80 498 -57 1787 87 121 8 chr20 4539222 4539487 -67614395 + AluSx SINE Alu 1 295 -17 880 242 82 35 chr20 4539487 4539547 -67614335 + MLT1H LTR MaLR 498 554 -1 22 0 0 0 chr20 4539685 4539707 -67614175 + AT_rich Low_complexity Low_complexity 1 22 0 564 228 21 35 chr20 4539763 4539908 -67613974 - LTR67 LTR ERVL -379 178 36 286 325 98 8 chr20 4540078 4540201 -67613681 + MLT1K LTR MaLR 138 271 -317 361 212 185 20 chr20 4540442 4540456 -67613426 - MIR SINE MIR -56 206 196 2301 86 3 0 chr20 4540456 4540758 -67613124 - AluSx SINE Alu -9 303 1 361 212 185 20 chr20 4540758 4540894 -67612988 - MIR SINE MIR -66 196 31 262 194 19 68 chr20 4541366 4541469 -67612413 + (CGGGG)n Simple_repeat Simple_repeat 5 102 0 21 95 0 0 chr20 4541736 4541799 -67612083 + GC_rich Low_complexity Low_complexity 1 63 0 23 0 0 0 chr20 4541905 4541928 -67611954 + GC_rich Low_complexity Low_complexity 1 23 0 1137 326 126 35 chr20 4542706 4543469 -67610413 + L2 LINE L2 1603 2295 -1018 2370 88 0 0 chr20 4543469 4543776 -67610106 - AluSq SINE Alu -6 307 1 1137 326 126 35 chr20 4543776 4544555 -67609327 + L2 LINE L2 2295 3297 -16 607 236 188 0 chr20 4545344 4545509 -67608373 - MIR SINE MIR -26 236 41 258 286 11 55 chr20 4545528 4545619 -67608263 - MIR SINE MIR -169 93 7 511 221 105 70 chr20 4546905 4547011 -67606871 - MER5A DNA MER1_type -1 188 71 1699 130 71 22 chr20 4547011 4547307 -67606575 - AluSx SINE Alu 0 309 1 511 221 105 70 chr20 4547307 4547371 -67606511 - MER5A DNA MER1_type -118 71 11 343 232 45 18 chr20 4548053 4548165 -67605717 + MIR SINE MIR 34 148 -60 25 31 0 0 chr20 4548249 4548281 -67605601 + AT_rich Low_complexity Low_complexity 1 32 0 325 200 71 0 chr20 4548758 4548843 -67605039 - MER103 DNA DNA -46 120 30 203 61 0 30 chr20 4549067 4549100 -67604782 + MIR SINE MIR 109 140 -68 2165 114 0 0 chr20 4549388 4549687 -67604195 - AluSx SINE Alu -13 299 1 361 217 33 11 chr20 4549790 4549882 -67604000 + MIR SINE MIR 84 177 -85 188 222 22 0 chr20 4550255 4550300 -67603582 - L2 LINE L2 -557 2757 2712 2441 44 0 0 chr20 4550541 4550839 -67603043 - AluY SINE Alu -8 303 6 2145 91 42 0 chr20 4551770 4552056 -67601826 - AluSq SINE Alu -15 298 1 234 271 0 0 chr20 4552134 4552193 -67601689 + MIR SINE MIR 95 153 -109 393 282 113 15 chr20 4553038 4553263 -67600619 + MIR SINE MIR 11 258 -4 333 155 42 0 chr20 4554409 4554480 -67599402 + L2 LINE L2 3239 3312 -1 191 200 36 0 chr20 4555067 4555122 -67598760 + L2 LINE L2 2924 2980 -292 181 263 0 0 chr20 4555390 4555428 -67598454 - MIR SINE MIR -102 160 123 436 233 68 48 chr20 4555807 4555953 -67597929 - MER5B DNA MER1_type -8 170 22 2679 197 48 10 chr20 4556143 4556661 -67597221 - MLT1F LTR MaLR -4 538 1 343 203 203 72 chr20 4557032 4557170 -67596712 - MIR SINE MIR -82 180 25 1510 190 33 53 chr20 4557538 4557691 -67596191 - AluJo SINE Alu -8 294 148 2407 72 0 3 chr20 4557691 4557998 -67595884 - AluSg SINE Alu -4 306 1 1510 190 33 53 chr20 4557998 4558144 -67595738 - AluJo SINE Alu -154 148 1 311 198 74 12 chr20 4558351 4558432 -67595450 - MIR SINE MIR -112 150 65 916 188 0 0 chr20 4558999 4559153 -67594729 - AluJ SINE Alu -19 293 140 244 262 65 19 chr20 4560238 4560345 -67593537 - MIR3 SINE MIR -82 126 15 2344 87 0 0 chr20 4561191 4561501 -67592381 - AluSx SINE Alu -2 310 1 925 185 0 0 chr20 4561528 4561772 -67592110 - AluJo SINE Alu 0 364 121 795 129 16 8 chr20 4561812 4561936 -67591946 - AluJo SINE Alu -177 135 11 186 189 81 0 chr20 4562665 4562702 -67591180 + L2 LINE L2 3225 3264 -8 515 188 0 0 chr20 4563108 4563193 -67590689 - AluSg/x SINE Alu -9 301 217 180 0 0 0 chr20 4563921 4563941 -67589941 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1563 268 44 24 chr20 4565744 4566285 -67587597 - L1ME3 LINE L1 -21 6141 5590 199 197 0 30 chr20 4567414 4567480 -67586402 + CT-rich Low_complexity Low_complexity 4 67 0 1859 115 0 4 chr20 4568664 4568924 -67584958 - AluSx SINE Alu -11 301 43 447 257 0 18 chr20 4569026 4569139 -67584743 - MLT1H LTR MaLR -438 111 1 28 86 0 0 chr20 4570403 4570473 -67583409 + AT_rich Low_complexity Low_complexity 1 70 0 840 213 66 5 chr20 4570542 4570679 -67583203 + MER3 DNA MER1_type 1 155 -54 2156 106 10 0 chr20 4570679 4570981 -67582901 - AluSg SINE Alu -5 305 1 840 213 66 5 chr20 4570981 4571040 -67582842 + MER3 DNA MER1_type 155 209 0 405 215 58 0 chr20 4571050 4571184 -67582698 - L1M4 LINE L1 -1979 4167 4020 2323 103 3 0 chr20 4571315 4571627 -67582255 - AluSp SINE Alu 0 313 1 553 310 92 50 chr20 4571860 4572241 -67581641 - MARNA DNA Mariner -122 464 68 778 234 49 0 chr20 4572285 4572469 -67581413 + MIR SINE MIR 21 213 -49 270 367 110 4 chr20 4573177 4573414 -67580468 + L2 LINE L2 2715 2976 -338 215 194 235 20 chr20 4573515 4573613 -67580269 + L2 LINE L2 3138 3256 -16 564 176 126 75 chr20 4576545 4576621 -67577261 - MER3 DNA MER1_type 0 209 138 1877 141 3 66 chr20 4576621 4576940 -67576942 - AluJb SINE Alu -13 299 1 564 176 126 75 chr20 4576940 4577062 -67576820 - MER3 DNA MER1_type -71 138 1 843 250 58 43 chr20 4577574 4577850 -67576032 - MLT1J LTR MaLR -199 312 33 443 95 0 0 chr20 4577862 4577925 -67575957 + FRAM/FAM SINE Alu 24 86 -90 287 116 0 0 chr20 4578014 4578057 -67575825 + MER5A DNA MER1_type 33 75 -114 1606 127 5 0 chr20 4578057 4578277 -67575605 + AluSg/x SINE Alu 84 304 -6 21 0 0 0 chr20 4578306 4578327 -67575555 + AT_rich Low_complexity Low_complexity 1 21 0 1606 127 5 0 chr20 4578341 4578561 -67575321 + AluSg/x SINE Alu 84 304 -6 326 237 76 42 chr20 4578610 4578677 -67575205 + MER5A DNA MER1_type 61 135 -54 1792 160 0 20 chr20 4578677 4578970 -67574912 + AluJo SINE Alu 14 300 -12 326 237 76 42 chr20 4578970 4579020 -67574862 + MER5A DNA MER1_type 135 182 -7 307 335 112 61 chr20 4579112 4579488 -67574394 + L2 LINE L2 2870 3264 -8 * 570 245 82 19 chr20 4579485 4579702 -67574180 - MIR SINE MIR 0 262 40 2436 84 3 0 chr20 4580747 4581058 -67572824 - AluSx SINE Alu 0 312 1 927 157 0 0 chr20 4581238 4581372 -67572510 + FRAM SINE Alu 28 161 -15 834 167 0 0 chr20 4581497 4581617 -67572265 + FLAM_C SINE Alu 1 120 -23 332 308 18 18 chr20 4581672 4581841 -67572041 + (CA)n Simple_repeat Simple_repeat 2 170 0 1188 156 35 25 chr20 4582180 4582379 -67571503 - AluJo SINE Alu -28 284 84 250 282 13 0 chr20 4582400 4582478 -67571404 + (CA)n Simple_repeat Simple_repeat 2 80 0 2161 126 7 0 chr20 4582585 4582879 -67571003 - AluSx SINE Alu -16 296 1 229 250 38 0 chr20 4583054 4583134 -67570748 - L1MC4a LINE L1 -1868 5940 5858 2390 103 0 3 chr20 4583136 4583448 -67570434 + AluSq SINE Alu 1 311 -2 221 287 210 7 chr20 4583842 4583985 -67569897 - MIR SINE MIR -10 252 81 1716 248 79 46 chr20 4584087 4584404 -67569478 + L1ME3 LINE L1 5533 5880 -282 1851 168 14 0 chr20 4584404 4584719 -67569163 + AluJb SINE Alu 1 319 0 1716 248 79 46 chr20 4584719 4584968 -67568914 + L1ME3 LINE L1 5880 6119 -43 271 261 57 11 chr20 4586674 4586762 -67567120 + MLT1K LTR MaLR 494 585 -3 998 283 130 41 chr20 4586999 4587828 -67566054 + L2 LINE L2 2336 3311 -2 2460 68 19 3 chr20 4588639 4588947 -67564935 + AluSp SINE Alu 1 313 0 1668 135 8 4 chr20 4589356 4589600 -67564282 + AluSp SINE Alu 1 245 -68 1289 249 63 89 chr20 4589618 4590038 -67563844 - L1ME3A LINE L1 -26 6144 5714 2303 123 0 0 chr20 4590038 4590348 -67563534 + AluSg SINE Alu 1 310 0 1289 249 63 89 chr20 4590348 4590417 -67563465 - L1ME3A LINE L1 -456 5714 5670 2462 97 0 0 chr20 4590417 4590728 -67563154 - AluSx SINE Alu -1 311 1 1289 249 63 89 chr20 4590728 4590807 -67563075 - L1ME3A LINE L1 -500 5670 5590 583 218 177 0 chr20 4591199 4591346 -67562536 + MER5A DNA MER1_type 4 176 -13 474 257 70 23 chr20 4591602 4591707 -67562175 + MER5A DNA MER1_type 4 121 -68 2781 148 4 40 chr20 4591707 4591926 -67561956 - MER66B LTR ERV1 -4 482 257 2622 44 3 0 chr20 4591926 4592223 -67561659 - AluY SINE Alu -13 298 1 2781 148 4 40 chr20 4592223 4592503 -67561379 - MER66B LTR ERV1 -229 257 1 474 257 70 23 chr20 4592503 4592568 -67561314 + MER5A DNA MER1_type 121 182 -7 188 245 102 0 chr20 4592582 4592631 -67561251 - MER5B DNA MER1_type 0 178 125 351 135 58 106 chr20 4592666 4592723 -67561159 - MER5B DNA MER1_type -2 176 125 2236 88 39 20 chr20 4592723 4592860 -67561022 + AluSx SINE Alu 1 134 -178 2278 102 0 13 chr20 4592860 4593165 -67560717 + AluSq SINE Alu 1 301 -12 2236 88 39 20 chr20 4593165 4593333 -67560549 + AluSx SINE Alu 134 312 0 351 135 58 106 chr20 4593333 4593379 -67560503 - MER5B DNA MER1_type -53 125 78 455 323 45 15 chr20 4593438 4593639 -67560243 - ERVL LTR ERVL -3508 2256 2050 1839 125 3 44 chr20 4594019 4594316 -67559566 - AluSx SINE Alu -10 302 18 1795 163 7 17 chr20 4594410 4594710 -67559172 - AluJo SINE Alu -15 297 1 1119 279 70 52 chr20 4594712 4594748 -67559134 - L1ME3A LINE L1 0 6170 6136 3001 127 6 31 chr20 4594748 4594922 -67558960 + MER70A LTR ERVL 1 178 -294 2327 93 7 3 chr20 4594922 4595224 -67558658 + AluSx SINE Alu 3 305 -7 3001 127 6 31 chr20 4595224 4595531 -67558351 + MER70A LTR ERVL 178 470 -2 1119 279 70 52 chr20 4595531 4595882 -67558000 - L1ME3A LINE L1 -34 6136 5793 2343 103 0 6 chr20 4595882 4596193 -67557689 - AluSq SINE Alu -4 309 1 1119 279 70 52 chr20 4596193 4596227 -67557655 - L1ME3A LINE L1 -377 5793 5761 2221 114 0 0 chr20 4596227 4596526 -67557356 - AluSx SINE Alu -6 306 8 1119 279 70 52 chr20 4596526 4596734 -67557148 - L1ME3A LINE L1 -409 5761 5528 520 223 11 0 chr20 4596734 4596828 -67557054 + MER70A LTR ERVL 128 222 -250 314 176 0 0 chr20 4596842 4596893 -67556989 - MER70A LTR ERVL -139 333 283 523 192 0 0 chr20 4596921 4597041 -67556841 - L1M4 LINE L1 -2454 3692 3573 574 101 0 0 chr20 4597044 4597169 -67556713 + AluSp/q SINE Alu 205 329 0 365 238 159 24 chr20 4597169 4597295 -67556587 - L1M4 LINE L1 -2567 3579 3437 628 260 49 4 chr20 4597308 4597554 -67556328 - L1M4 LINE L1 -2932 3214 2958 * 2781 229 23 26 chr20 4597545 4597801 -67556081 - L1M4 LINE L1 -2812 3334 3079 2587 161 23 73 chr20 4597801 4598342 -67555540 - LTR9 LTR ERV1 0 612 107 2334 96 3 0 chr20 4598342 4598635 -67555247 + AluSq SINE Alu 1 294 -19 2587 161 23 73 chr20 4598635 4598737 -67555145 - LTR9 LTR ERV1 -505 107 1 2781 229 23 26 chr20 4598737 4599092 -67554790 - L1M4 LINE L1 -3067 3079 2724 2596 115 74 5 chr20 4599092 4599526 -67554356 + MER4C LTR ERV1 1 464 -1 2781 229 23 26 chr20 4599526 4599754 -67554128 - L1M4 LINE L1 -3422 2724 2497 2759 153 68 10 chr20 4599764 4600013 -67553869 - L1MC3 LINE L1 -8 7777 7544 2707 182 109 78 chr20 4600013 4600321 -67553561 + MER21B LTR ERV1 1 298 -565 1496 201 30 27 chr20 4600321 4600620 -67553262 + AluJo SINE Alu 1 300 -12 2707 182 109 78 chr20 4600620 4600847 -67553035 + MER21B LTR ERV1 298 516 -347 2506 92 0 0 chr20 4600847 4601151 -67552731 + AluSx SINE Alu 1 304 -8 2707 182 109 78 chr20 4601151 4601449 -67552433 + MER21B LTR ERV1 516 861 -2 2759 153 68 10 chr20 4601449 4601546 -67552336 - L1MC3 LINE L1 -241 7544 7454 2375 103 3 7 chr20 4601546 4601856 -67552026 - AluSq SINE Alu 0 313 5 2759 153 68 10 chr20 4601856 4602083 -67551799 - L1MC3 LINE L1 -331 7454 7170 1634 136 0 0 chr20 4602111 4602332 -67551550 - AluSx SINE Alu -91 221 1 263 305 12 0 chr20 4602544 4602626 -67551256 - L1ME LINE L1 -542 5579 5497 2370 84 0 3 chr20 4602659 4602958 -67550924 + AluSg SINE Alu 1 298 -12 397 233 78 3 chr20 4603319 4603434 -67550448 + MLT1I LTR MaLR 65 171 -238 721 121 60 0 chr20 4603984 4604100 -67549782 + FLAM_A SINE Alu 1 123 -10 21 0 0 0 chr20 4604107 4604128 -67549754 + AT_rich Low_complexity Low_complexity 1 21 0 2017 161 3 0 chr20 4604282 4604592 -67549290 + AluJo SINE Alu 1 311 -1 2336 98 16 7 chr20 4605015 4605321 -67548561 + AluSp SINE Alu 1 309 -4 346 239 8 62 chr20 4605413 4605543 -67548339 + L2 LINE L2 2523 2645 -669 * 841 267 160 11 chr20 4605530 4605904 -67547978 + L2 LINE L2 2884 3313 0 2350 97 0 6 chr20 4606724 4607035 -67546847 - AluSc SINE Alu 0 309 1 2150 114 19 10 chr20 4607062 4607370 -67546512 + AluSx SINE Alu 1 311 -1 284 278 14 0 chr20 4607526 4607598 -67546284 + MLT1L LTR MaLR 1 73 -542 498 129 24 0 chr20 4607626 4607711 -67546171 - MER58 DNA MER1_type -3 2417 2331 315 153 42 14 chr20 4607716 4607788 -67546094 - MER58 DNA MER1_type -188 153 80 2448 85 0 28 chr20 4607792 4607926 -67545956 + AluSx SINE Alu 1 137 -175 2507 68 0 10 chr20 4607926 4608236 -67545646 + AluY SINE Alu 1 307 -4 2448 85 0 28 chr20 4608236 4608418 -67545464 + AluSx SINE Alu 137 308 -4 201 74 0 0 chr20 4609293 4609320 -67544562 + (A)n Simple_repeat Simple_repeat 1 27 0 4032 128 2 11 chr20 4611320 4611835 -67542047 + MER41B LTR ERV1 1 510 -125 2361 87 37 3 chr20 4611835 4612133 -67541749 - AluSq SINE Alu -5 308 1 4032 128 2 11 chr20 4612133 4612258 -67541624 + MER41B LTR ERV1 510 635 0 680 155 43 183 chr20 4614883 4615089 -67538793 + Charlie4a DNA MER1_type 2 141 -1820 2393 177 101 18 chr20 4615089 4615604 -67538278 + LTR64 LTR ERVK 1 558 0 680 155 43 183 chr20 4615604 4615746 -67538136 + Charlie4a DNA MER1_type 141 301 -207 396 157 56 111 chr20 4615752 4615860 -67538022 + L1M4 LINE L1 4829 4930 -1216 838 237 23 0 chr20 4615860 4616075 -67537807 + Charlie4a DNA MER1_type 286 505 -3 2232 121 12 3 chr20 4616229 4616575 -67537307 + MER47A DNA MER2_type 2 350 -16 2480 79 3 10 chr20 4617638 4617943 -67535939 - AluSg SINE Alu -7 303 1 1865 154 40 3 chr20 4618059 4618358 -67535524 - AluSx SINE Alu 0 312 3 1191 245 155 19 chr20 4618966 4619398 -67534484 - LTR16C LTR ERVL 0 491 1 192 167 146 0 chr20 4619877 4619925 -67533957 + L2 LINE L2 2920 2974 -298 216 317 80 38 chr20 4620074 4620336 -67533546 + L2 LINE L2 2392 2664 -650 488 144 0 11 chr20 4620337 4620427 -67533455 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 963 54 0 0 chr20 4620440 4620551 -67533331 - AluSq/x SINE Alu -202 111 1 341 276 22 67 chr20 4620552 4620686 -67533196 + L2 LINE L2 2615 2742 -572 184 306 0 0 chr20 4621136 4621185 -67532697 - L2 LINE L2 -14 3299 3251 231 340 57 0 chr20 4621242 4621348 -67532534 + L2 LINE L2 1314 1425 -1889 757 205 227 4 chr20 4621678 4621951 -67531931 + L2 LINE L2 2015 2348 -966 * 964 247 37 72 chr20 4621944 4622345 -67531537 - L2 LINE L2 -96 3217 2831 749 283 148 24 chr20 4622343 4623031 -67530851 + L2 LINE L2 2542 3309 -4 * 516 86 21 21 chr20 4623637 4623730 -67530152 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 1669 173 73 0 chr20 4623742 4623908 -67529974 - AluJo SINE Alu -2 310 157 276 30 0 0 chr20 4623908 4623941 -67529941 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1669 173 73 0 chr20 4623941 4624063 -67529819 - AluJo SINE Alu -155 157 1 213 229 48 60 chr20 4624104 4624187 -67529695 + L2 LINE L2 3191 3272 0 2362 101 3 3 chr20 4624549 4624857 -67529025 - AluSq SINE Alu -4 309 2 969 224 137 25 chr20 4625306 4625664 -67528218 + LTR16A1 LTR ERVL 7 404 -53 728 206 0 0 chr20 4625666 4625797 -67528085 + FLAM_A SINE Alu 2 132 -1 1837 167 0 4 chr20 4625822 4626091 -67527791 + AluJb SINE Alu 1 268 -44 295 175 16 0 chr20 4626199 4626262 -67527620 + LTR16A1 LTR ERVL 394 457 0 852 266 18 9 chr20 4627372 4627601 -67526281 - L2 LINE L2 -250 3063 2833 248 272 12 25 chr20 4628025 4628106 -67525776 + CT-rich Low_complexity Low_complexity 2 81 0 866 209 102 10 chr20 4628781 4628977 -67524905 + MIR SINE MIR 20 233 -29 198 320 78 31 chr20 4629075 4629203 -67524679 - L2 LINE L2 -822 2492 2359 1337 196 220 14 chr20 4629250 4629669 -67524213 + MLT1D LTR MaLR 1 505 0 821 133 0 66 chr20 4629912 4630063 -67523819 + FRAM SINE Alu 23 163 -13 183 80 0 0 chr20 4630104 4630129 -67523753 + (A)n Simple_repeat Simple_repeat 1 25 0 1540 95 30 22 chr20 4630302 4630481 -67523401 - AluSg/x SINE Alu -11 301 118 234 0 0 0 chr20 4630481 4630507 -67523375 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1540 95 30 22 chr20 4630507 4630558 -67523324 - AluSg/x SINE Alu -194 118 69 2222 92 0 16 chr20 4630610 4630924 -67522958 + AluSx SINE Alu 1 309 -3 375 212 118 0 chr20 4631360 4631445 -67522437 - MER63 DNA MER1_type -338 724 4 2083 246 97 69 chr20 4632065 4633156 -67520726 + L1MC5 LINE L1 6698 7777 -184 2165 107 7 0 chr20 4633156 4633456 -67520426 + AluSx SINE Alu 1 302 -10 2083 246 97 69 chr20 4633456 4633612 -67520270 + L1MC5 LINE L1 7777 7927 -34 1435 146 18 98 chr20 4633758 4634093 -67519789 + L1MB1 LINE L1 5860 6167 -1 22 0 0 0 chr20 4634094 4634116 -67519766 + AT_rich Low_complexity Low_complexity 1 22 0 221 208 21 0 chr20 4634184 4634232 -67519650 - L2 LINE L2 -1 3271 3223 1140 249 46 51 chr20 4634595 4634968 -67518914 - L1ME3 LINE L1 -51 6111 5741 225 65 0 0 chr20 4635503 4635534 -67518348 + (TG)n Simple_repeat Simple_repeat 2 32 0 281 278 19 37 chr20 4637885 4637993 -67515889 + L1ME3A LINE L1 5843 5948 -222 447 242 115 73 chr20 4638629 4638794 -67515088 - MIR SINE MIR -83 179 8 449 288 89 67 chr20 4638806 4639223 -67514659 - L2 LINE L2 -35 3237 2812 395 316 32 7 chr20 4639368 4639523 -67514359 - L2 LINE L2 -513 2801 2643 312 180 22 22 chr20 4641555 4641644 -67512238 + L1MB7 LINE L1 6096 6184 0 1474 199 0 7 chr20 4641685 4641989 -67511893 - AluJb SINE Alu 0 303 2 247 301 0 36 chr20 4642051 4642134 -67511748 - L2 LINE L2 -2 3311 3232 708 216 5 90 chr20 4642136 4642358 -67511524 - MLT1D LTR MaLR -302 203 1 529 303 34 6 chr20 4642417 4642595 -67511287 - MIR SINE MIR -55 207 25 211 226 57 0 chr20 4642852 4642905 -67510977 - L2 LINE L2 -2 3311 3256 233 272 12 0 chr20 4643750 4643831 -67510051 - L1ME LINE L1 -269 5852 5771 805 148 51 120 chr20 4644094 4644258 -67509624 + MER3 DNA MER1_type 2 149 -60 677 208 0 0 chr20 4644258 4644383 -67509499 - FLAM_A SINE Alu -8 125 1 805 148 51 120 chr20 4644383 4644434 -67509448 + MER3 DNA MER1_type 149 202 -7 21 57 0 0 chr20 4644503 4644538 -67509344 + AT_rich Low_complexity Low_complexity 1 35 0 1832 155 0 0 chr20 4644600 4644897 -67508985 - AluSg SINE Alu -13 297 1 27 29 0 0 chr20 4644897 4644931 -67508951 + AT_rich Low_complexity Low_complexity 1 34 0 1226 136 11 0 chr20 4644947 4645138 -67508744 - AluJb SINE Alu -119 193 1 233 240 13 40 chr20 4645146 4645221 -67508661 + MER113 DNA MER1_type? 439 511 -10 1299 164 8 4 chr20 4645649 4645887 -67507995 - AluSg SINE Alu -8 302 64 246 189 0 0 chr20 4645987 4646024 -67507858 - Alu SINE Alu -265 37 1 2391 64 0 3 chr20 4646039 4646336 -67507546 - AluSc SINE Alu -13 296 1 248 233 0 27 chr20 4646338 4646411 -67507471 - L1MC4a LINE L1 -1868 5940 5870 545 256 40 74 chr20 4646413 4646589 -67507293 + MIR SINE MIR 61 230 -32 1792 172 3 0 chr20 4646603 4646906 -67506976 - AluJb SINE Alu -8 304 1 1920 95 74 7 chr20 4646919 4647204 -67506678 - AluSx SINE Alu -8 304 1 880 296 57 55 chr20 4647216 4647729 -67506153 - L1MC4a LINE L1 -1993 5815 5302 26 50 0 0 chr20 4648130 4648170 -67505712 + AT_rich Low_complexity Low_complexity 1 40 0 2122 120 0 0 chr20 4648288 4648589 -67505293 + AluSg SINE Alu 1 301 -9 256 130 87 0 chr20 4648750 4648796 -67505086 - L2 LINE L2 -6 3307 3258 2162 233 33 43 chr20 4649399 4649415 -67504467 - L1M4c LINE L1 -4586 2371 2356 2093 94 16 13 chr20 4649415 4649722 -67504160 - AluSc SINE Alu -1 308 1 2162 233 33 43 chr20 4649722 4650443 -67503439 - L1M4c LINE L1 -4601 2356 1606 2034 109 0 0 chr20 4650444 4650720 -67503162 + AluSc SINE Alu 1 276 -33 1963 141 41 69 chr20 4650899 4651245 -67502637 - L1MC1 LINE L1 -143 6190 5855 2176 104 0 16 chr20 4651245 4651553 -67502329 - AluSx SINE Alu -9 303 1 1963 141 41 69 chr20 4651553 4651596 -67502286 - L1MC1 LINE L1 -478 5855 5812 1125 238 34 3 chr20 4651595 4651919 -67501963 + L1ME4a LINE L1 2152 2485 -3661 * 10952 140 95 50 chr20 4651929 4654251 -67499631 - L1MCa LINE L1 -3997 2429 5 239 267 50 25 chr20 4654813 4654933 -67498949 - L1M4 LINE L1 -3161 2985 2863 181 219 0 24 chr20 4655014 4655055 -67498827 + L2 LINE L2 3229 3268 -4 1799 227 59 70 chr20 4655312 4655907 -67497975 - MER77 LTR ERV1 -3 602 54 1592 293 107 20 chr20 4656322 4657595 -67496287 + L1ME4a LINE L1 2877 4260 -1886 249 250 75 66 chr20 4657997 4658134 -67495748 + L1ME4a LINE L1 5858 5999 -122 2065 118 10 0 chr20 4658134 4658431 -67495451 + AluSx SINE Alu 5 304 -8 249 250 75 66 chr20 4658431 4658521 -67495361 + L1ME4a LINE L1 5999 6087 -34 287 224 0 0 chr20 4659810 4659859 -67494023 + MER91B DNA MER1_type 4 52 -138 674 222 25 76 chr20 4660347 4660545 -67493337 - MIR SINE MIR 0 262 75 371 178 204 25 chr20 4660552 4660701 -67493181 + MLT1H LTR MaLR 53 310 -239 403 237 161 79 chr20 4660977 4661306 -67492576 - MER90 LTR ERV1 -219 356 1 272 30 0 0 chr20 4661785 4661818 -67492064 + MADE1 DNA Mariner 6 38 -42 439 293 97 49 chr20 4662309 4662646 -67491236 + HAL1b LINE L1 219 563 -785 382 85 34 0 chr20 4662652 4662711 -67491171 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4662712 4662832 -67491050 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4662878 4663009 -67490873 + (TA)n Simple_repeat Simple_repeat 2 140 0 213 196 0 0 chr20 4663030 4663076 -67490806 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1777 160 66 0 chr20 4663206 4663525 -67490357 - MLT2C1 LTR ERVL -57 340 1 1192 133 0 0 chr20 4663569 4663742 -67490140 + AluSp SINE Alu 134 306 -7 22 0 0 0 chr20 4664112 4664134 -67489748 + AT_rich Low_complexity Low_complexity 1 22 0 915 190 0 22 chr20 4664256 4664435 -67489447 + MER5B DNA MER1_type 4 178 0 239 242 0 16 chr20 4664583 4664645 -67489237 + MER5A DNA MER1_type 9 69 -120 405 369 77 45 chr20 4664661 4664782 -67489100 + L2 LINE L2 2624 2740 -532 3463 154 43 60 chr20 4664782 4665485 -67488397 + LTR8 LTR ERV1 1 691 0 405 369 77 45 chr20 4665485 4665803 -67488079 + L2 LINE L2 2740 3087 -185 5342 76 18 7 chr20 4665803 4666537 -67487345 + L1PA13 LINE L1 5419 6160 -3 405 369 77 45 chr20 4666537 4666685 -67487197 + L2 LINE L2 3087 3229 -43 1288 254 80 15 chr20 4667655 4668132 -67485750 + HAL1 LINE L1 1705 2212 -295 5330 136 12 16 chr20 4668195 4669041 -67484841 + MER4D LTR ERV1 62 903 0 243 286 128 36 chr20 4669041 4669761 -67484121 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4669791 4669882 -67484000 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 532 321 103 26 chr20 4669922 4670271 -67483611 + L1M4 LINE L1 2390 2765 -3381 283 214 18 18 chr20 4670410 4670522 -67483360 + (CCG)n Simple_repeat Simple_repeat 2 113 0 22 56 0 0 chr20 4670770 4670806 -67483076 + GC_rich Low_complexity Low_complexity 1 36 0 476 251 150 24 chr20 4671752 4671959 -67481923 + MIR SINE MIR 7 239 -23 289 340 52 43 chr20 4673241 4673565 -67480317 + L2 LINE L2 2304 2630 -684 276 100 0 0 chr20 4674025 4674065 -67479817 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 893 94 0 24 chr20 4674066 4674193 -67479689 - FLAM_C SINE Alu -19 124 1 2201 87 10 0 chr20 4674373 4674672 -67479210 + AluSc SINE Alu 1 302 -7 254 252 165 52 chr20 4674978 4675093 -67478789 + MIR3 SINE MIR 33 160 -48 1710 159 3 37 chr20 4675148 4675469 -67478413 + AluJb SINE Alu 1 310 -2 245 352 0 0 chr20 4675695 4675766 -67478116 + HAL1 LINE L1 14 84 -2423 482 261 31 15 chr20 4676063 4676133 -67477749 - L2 LINE L2 0 3313 3246 186 43 0 0 chr20 4676133 4676156 -67477726 + (TA)n Simple_repeat Simple_repeat 2 24 0 1628 160 0 42 chr20 4676157 4676469 -67477413 - AluJo SINE Alu -13 299 1 482 261 31 15 chr20 4676469 4676526 -67477356 - L2 LINE L2 -66 3247 3182 704 289 97 62 chr20 4677454 4677886 -67475996 - MLT1J2 LTR MaLR -3 447 1 258 229 16 16 chr20 4678986 4679047 -67474835 + MIR SINE MIR 92 152 -110 471 277 125 64 chr20 4679944 4680287 -67473595 + MLT1I LTR MaLR 46 409 0 434 263 126 11 chr20 4680352 4680527 -67473355 + L1ME LINE L1 5566 5760 -410 220 362 31 6 chr20 4680630 4680793 -67473089 - L2 LINE L2 -1620 1694 1528 1702 230 69 17 chr20 4681195 4681599 -67472283 - MER89-int LTR ERV1 -4582 2219 1795 471 18 0 0 chr20 4681706 4681762 -67472120 + (TA)n Simple_repeat Simple_repeat 1 56 0 1901 143 6 25 chr20 4681787 4682101 -67471781 - MLT2C1 LTR ERVL -59 338 31 4161 244 110 48 chr20 4682102 4683596 -67470286 - MER89-int LTR ERV1 -5212 1589 3 1961 154 63 48 chr20 4683598 4683920 -67469962 - MER89 LTR ERV1 0 559 128 1760 164 43 0 chr20 4683920 4684219 -67469663 + AluJb SINE Alu 1 312 0 1961 154 63 48 chr20 4684219 4684344 -67469538 - MER89 LTR ERV1 -431 128 6 1091 121 86 0 chr20 4685209 4685261 -67468621 - AluSx SINE Alu -123 189 143 290 45 23 0 chr20 4685261 4685305 -67468577 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1091 121 86 0 chr20 4685305 4685426 -67468456 - AluSx SINE Alu -169 143 1 506 347 155 14 chr20 4685440 4685773 -67468109 - L2 LINE L2 0 3313 2902 9211 45 1 0 chr20 4685773 4686843 -67467039 - MER11C LTR ERVK 0 1071 1 506 347 155 14 chr20 4686843 4686947 -67466935 - L2 LINE L2 -411 2902 2814 1116 143 5 69 chr20 4687053 4687269 -67466613 + AluJb SINE Alu 1 202 -110 867 104 0 30 chr20 4687269 4687403 -67466479 - AluSg/x SINE Alu -10 302 173 657 167 9 0 chr20 4687403 4687511 -67466371 + AluJb SINE Alu 190 298 -14 498 278 200 4 chr20 4687708 4687978 -67465904 - L2 LINE L2 0 3313 2991 1145 279 141 39 chr20 4688117 4688414 -67465468 - L2 LINE L2 -706 2608 2342 1609 149 26 48 chr20 4688414 4688723 -67465159 - AluJo SINE Alu -10 302 1 1145 279 141 39 chr20 4688723 4689136 -67464746 - L2 LINE L2 -972 2342 1826 255 315 9 9 chr20 4689144 4689277 -67464605 + L1P4 LINE L1 5351 5483 -671 1511 177 46 87 chr20 4689564 4689793 -67464089 - MLT1A2 LTR MaLR 0 374 166 1993 138 0 0 chr20 4689793 4690089 -67463793 - AluJb SINE Alu -11 301 6 1511 177 46 87 chr20 4690089 4690249 -67463633 - MLT1A2 LTR MaLR -208 166 1 1966 159 8 74 chr20 4690382 4690773 -67463109 - MLT1A1 LTR MaLR 0 365 1 345 145 0 0 chr20 4690793 4690855 -67463027 + (T)n Simple_repeat Simple_repeat 1 62 0 1993 131 0 7 chr20 4690876 4691181 -67462701 - AluSg SINE Alu -7 303 1 325 197 39 55 chr20 4691197 4691324 -67462558 - L1M4 LINE L1 -2123 4521 4397 188 234 62 47 chr20 4691997 4692061 -67461821 + L2 LINE L2 1764 1828 -1486 989 192 12 0 chr20 4692115 4692282 -67461600 - FAM SINE Alu -6 169 1 729 177 0 0 chr20 4692300 4692424 -67461458 - L1ME3A LINE L1 -5 6165 6042 22 0 0 0 chr20 4692813 4692835 -67461047 + AT_rich Low_complexity Low_complexity 1 22 0 2245 67 0 3 chr20 4692844 4693152 -67460730 + AluY SINE Alu 1 307 0 1708 178 57 22 chr20 4693153 4693519 -67460363 - L1MB8 LINE L1 -7 6171 5793 774 164 47 8 chr20 4693539 4693667 -67460215 + FLAM_C SINE Alu 1 133 0 5025 185 22 100 chr20 4693672 4694663 -67459219 - L1M4 LINE L1 -5350 1192 324 1929 129 28 0 chr20 4694663 4694950 -67458932 - AluSx SINE Alu -17 295 1 5025 185 22 100 chr20 4694950 4695251 -67458631 - L1M4 LINE L1 -6218 324 1 1966 66 66 4 chr20 4695254 4695513 -67458369 - THE1C LTR MaLR 0 375 101 949 254 108 20 chr20 4695512 4695854 -67458028 + MLT1L LTR MaLR 243 614 -1 * 2281 81 0 0 chr20 4696578 4696876 -67457006 - AluY SINE Alu -13 298 1 770 128 43 0 chr20 4697014 4697131 -67456751 - AluJo SINE Alu -176 136 15 217 354 66 21 chr20 4697445 4697644 -67456238 + MIR SINE MIR 2 206 -56 1800 247 42 6 chr20 4697672 4698145 -67455737 - LTR16C LTR ERVL 0 491 2 198 279 16 16 chr20 4700239 4700300 -67453582 + L2 LINE L2 3004 3064 -208 200 94 0 31 chr20 4700380 4700412 -67453470 + (TCC)n Simple_repeat Simple_repeat 3 33 0 234 0 0 0 chr20 4702250 4702276 -67451606 + (TC)n Simple_repeat Simple_repeat 1 26 0 549 299 12 46 chr20 4703964 4704205 -67449677 - L1MC4a LINE L1 -1894 5914 5682 637 234 158 85 chr20 4704209 4704670 -67449212 - MLT1J LTR MaLR -5 506 12 883 278 60 3 chr20 4704674 4704958 -67448924 - L1MC4a LINE L1 -2152 5656 5357 421 217 101 22 chr20 4705178 4705316 -67448566 - MIR SINE MIR -96 166 18 200 33 0 33 chr20 4705360 4705390 -67448492 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 45404 35 3 2 chr20 4705390 4711521 -67442361 - L1PA3 LINE L1 -16 6139 1 289 250 57 34 chr20 4711537 4711625 -67442257 - MIR3 SINE MIR -23 185 96 254 188 21 0 chr20 4712201 4712249 -67441633 + MLT1L LTR MaLR 120 168 -447 2400 64 0 0 chr20 4712394 4712691 -67441191 - AluY SINE Alu -14 297 1 347 239 185 8 chr20 4712947 4713077 -67440805 + MLT1L LTR MaLR 446 598 -17 711 300 65 43 chr20 4713149 4713689 -67440193 - L1MC4a LINE L1 -1940 5868 5317 372 345 45 61 chr20 4713720 4713850 -67440032 - L1MC4a LINE L1 -860 5286 5155 15558 32 0 1 chr20 4713850 4716433 -67437449 - L1PA4 LINE L1 -6 6149 3565 372 345 45 61 chr20 4716433 4716661 -67437221 - L1MC4a LINE L1 -991 5155 4934 2287 239 49 42 chr20 4717395 4717768 -67436114 + L1ME3 LINE L1 5466 5835 -327 2275 154 26 8 chr20 4717768 4718151 -67435731 + MLT1B LTR MaLR 1 390 0 2287 239 49 42 chr20 4718151 4718200 -67435682 + L1ME3 LINE L1 5835 5882 -280 1854 122 0 0 chr20 4718200 4718488 -67435394 + AluSx SINE Alu 27 314 0 2287 239 49 42 chr20 4718488 4718752 -67435130 + L1ME3 LINE L1 5882 6159 -3 360 294 27 55 chr20 4719615 4719761 -67434121 - MIR SINE MIR -64 144 3 637 142 67 8 chr20 4719811 4719945 -67433937 + MER96B DNA MER1_type? 80 221 -196 366 374 138 16 chr20 4720799 4721045 -67432837 - L2 LINE L2 -2 3270 2995 318 98 0 0 chr20 4721067 4721118 -67432764 + (ATG)n Simple_repeat Simple_repeat 3 53 0 229 136 182 30 chr20 4722989 4723055 -67430827 + LTR33A LTR ERVL 7 82 -441 461 303 161 8 chr20 4723094 4723348 -67430534 + LTR16C LTR ERVL 169 461 -30 392 245 19 19 chr20 4723538 4723644 -67430238 - MIR3 SINE MIR -6 202 97 210 337 23 0 chr20 4724009 4724095 -67429787 - L2 LINE L2 -220 3052 2965 424 304 88 0 chr20 4724168 4724349 -67429533 + MIR SINE MIR 2 198 -64 1194 281 98 7 chr20 4724604 4725052 -67428830 - LTR16C LTR ERVL -2 489 1 909 256 86 6 chr20 4725632 4725956 -67427926 - LTR16C LTR ERVL -52 439 90 205 204 41 0 chr20 4726082 4726131 -67427751 + L2 LINE L2 2716 2766 -548 333 296 107 15 chr20 4726745 4726941 -67426941 + LTR16C LTR ERVL 1 214 -277 552 228 28 61 chr20 4726985 4727165 -67426717 + LTR16C LTR ERVL 306 479 -12 628 266 88 57 chr20 4728388 4728685 -67425197 + MLT1K LTR MaLR 103 408 -180 306 194 0 0 chr20 4728712 4728774 -67425108 + GA-rich Low_complexity Low_complexity 2 63 0 463 333 145 0 chr20 4728875 4729103 -67424779 + LTR16C LTR ERVL 3 263 -228 609 205 8 0 chr20 4729156 4729273 -67424609 + LTR16C LTR ERVL 370 487 -4 2316 145 19 128 chr20 4729463 4729940 -67423942 - MSTA LTR MaLR -1 425 1 1269 283 82 50 chr20 4730442 4730857 -67423025 + L2 LINE L2 2449 2849 -464 1939 166 0 7 chr20 4730857 4731159 -67422723 - AluSx SINE Alu -12 300 1 1269 283 82 50 chr20 4731159 4731575 -67422307 + L2 LINE L2 2849 3313 0 21 0 0 0 chr20 4731641 4731662 -67422220 + AT_rich Low_complexity Low_complexity 1 21 0 4104 108 0 0 chr20 4731966 4732520 -67421362 - MER41A LTR ERV1 0 554 1 303 253 20 20 chr20 4733069 4733168 -67420714 - MIR SINE MIR -8 254 156 5469 152 46 20 chr20 4733202 4733505 -67420377 - L1MDb LINE L1 -3890 2516 2222 4148 100 32 0 chr20 4733505 4734067 -67419815 + LTR19B LTR ERV1 1 580 0 5469 152 46 20 chr20 4734067 4734931 -67418951 - L1MDb LINE L1 -4184 2222 1316 218 288 43 0 chr20 4734934 4735022 -67418860 + MIR SINE MIR 97 151 -57 2064 104 24 7 chr20 4735593 4735881 -67418001 - AluSc SINE Alu -16 293 1 547 174 174 19 chr20 4736650 4736811 -67417071 - MER5A DNA MER1_type 0 189 4 2582 78 0 0 chr20 4737007 4737316 -67416566 + AluY SINE Alu 3 311 0 243 279 39 34 chr20 4737503 4737684 -67416198 + L1ME4a LINE L1 4880 5060 -1086 21 36 0 0 chr20 4737730 4737758 -67416124 + AT_rich Low_complexity Low_complexity 1 28 0 230 139 0 0 chr20 4737853 4737889 -67415993 + L1MC3 LINE L1 6079 6114 -1671 2231 184 59 36 chr20 4738250 4738313 -67415569 + MLT1D LTR MaLR 1 61 -444 1872 160 39 64 chr20 4738313 4738719 -67415163 - MSTD LTR MaLR 0 396 1 2231 184 59 36 chr20 4738719 4739149 -67414733 + MLT1D LTR MaLR 61 505 0 592 291 73 36 chr20 4739156 4739569 -67414313 + L1ME4a LINE L1 5513 5940 -181 302 342 91 17 chr20 4740317 4740548 -67413334 + MLT1K LTR MaLR 170 417 -171 803 178 127 35 chr20 4740932 4741129 -67412753 - MLT1I LTR MaLR 0 409 195 788 196 18 48 chr20 4741184 4741249 -67412633 + MER45A DNA AcHobo 1 66 -1515 2626 53 0 0 chr20 4741249 4741551 -67412331 - AluY SINE Alu -9 302 1 788 196 18 48 chr20 4741551 4741653 -67412229 + MER45A DNA AcHobo 66 163 -15 1957 157 13 10 chr20 4741763 4742069 -67411813 - AluJb SINE Alu 0 312 6 502 291 6 28 chr20 4742071 4742253 -67411629 - MLT1I LTR MaLR -231 178 1 1015 245 155 31 chr20 4743436 4743824 -67410058 + LTR16A1 LTR ERVL 6 441 -16 187 231 0 0 chr20 4744985 4745024 -67408858 + L2 LINE L2 3201 3239 -33 240 324 171 9 chr20 4745629 4745740 -67408142 - MIR SINE MIR -64 144 16 881 201 140 13 chr20 4745895 4746124 -67407758 + LOR1a LTR ERV1 240 497 0 1672 241 48 31 chr20 4746399 4746877 -67407005 + LTR16C LTR ERVL 6 491 0 181 216 27 0 chr20 4748120 4748157 -67405725 - MIR SINE MIR -117 145 108 1192 253 88 62 chr20 4748266 4748800 -67405082 - MLT1H LTR MaLR 0 549 2 200 273 18 0 chr20 4749649 4749704 -67404178 - MER5C DNA MER1_type -268 56 1 657 267 138 57 chr20 4749739 4750057 -67403825 + MER115 DNA AcHobo 119 462 -231 182 242 15 0 chr20 4750775 4750841 -67403041 + (CA)n Simple_repeat Simple_repeat 2 68 0 2291 145 89 2 chr20 4751923 4752220 -67401662 - MSTC LTR MaLR 0 428 87 2591 59 0 3 chr20 4752220 4752526 -67401356 - AluY SINE Alu -6 305 1 2291 145 89 2 chr20 4752526 4752622 -67401260 - MSTC LTR MaLR -341 87 1 1359 261 77 3 chr20 4754560 4754936 -67398946 - LTR16C LTR ERVL -3 488 85 2274 93 31 3 chr20 4755755 4756045 -67397837 + AluSx SINE Alu 1 298 -14 319 113 141 14 chr20 4756162 4756233 -67397649 + L1MB3 LINE L1 6103 6182 -1 190 188 0 31 chr20 4757407 4757471 -67396411 + CT-rich Low_complexity Low_complexity 3 64 0 312 299 189 0 chr20 4757850 4757977 -67395905 - MER5A DNA MER1_type 0 189 39 529 227 93 7 chr20 4758028 4758178 -67395704 - MER5B DNA MER1_type -15 163 1 280 200 15 0 chr20 4758632 4758697 -67395185 + MER116 DNA Mariner 1 66 -14 308 267 12 23 chr20 4759132 4759218 -67394664 - L2 LINE L2 0 3272 3188 656 212 190 0 chr20 4759278 4759457 -67394425 - LTR16A LTR ERVL 0 450 238 1250 212 60 50 chr20 4759506 4759903 -67393979 - Charlie4a DNA MER1_type -85 423 23 2492 60 16 0 chr20 4760163 4760478 -67393404 - L1PA7 LINE L1 0 6154 5835 758 73 73 0 chr20 4760478 4760588 -67393294 + L1PA7 LINE L1 5728 5845 -327 300 289 87 47 chr20 4761038 4761187 -67392695 + MLT1I LTR MaLR 60 214 -195 275 226 10 126 chr20 4761265 4761392 -67392490 + MLT1I LTR MaLR 290 533 -16 288 280 112 9 chr20 4761683 4761790 -67392092 - L2 LINE L2 -8 3305 3188 930 269 143 36 chr20 4762435 4762646 -67391236 - MLT1J LTR MaLR -36 475 288 1883 148 58 0 chr20 4762646 4762937 -67390945 + AluJb SINE Alu 1 308 -4 930 269 143 36 chr20 4762937 4763133 -67390749 - MLT1J LTR MaLR -223 288 23 463 283 118 48 chr20 4763133 4763448 -67390434 - MLT1I LTR MaLR 0 409 73 220 353 88 20 chr20 4764804 4764906 -67388976 - L2 LINE L2 -9 3263 3155 29 60 0 0 chr20 4764964 4765014 -67388868 + AT_rich Low_complexity Low_complexity 1 50 0 2335 113 0 0 chr20 4765269 4765580 -67388302 - AluSq SINE Alu -2 311 1 21 0 0 0 chr20 4765641 4765662 -67388220 + AT_rich Low_complexity Low_complexity 1 21 0 4460 170 12 35 chr20 4766273 4767151 -67386731 - L1MB8 LINE L1 -11 6447 5590 1093 231 30 36 chr20 4767152 4767489 -67386393 - L1MB8 LINE L1 -962 5464 5130 4284 189 44 43 chr20 4767497 4768365 -67385517 - L1MB8 LINE L1 -2797 3629 2763 2301 92 7 0 chr20 4768365 4768657 -67385225 - AluY SINE Alu -17 294 1 4284 189 44 43 chr20 4768657 4769154 -67384728 - L1MB8 LINE L1 -3663 2763 2268 1065 110 64 0 chr20 4769154 4769327 -67384555 + L1PB1 LINE L1 5968 6151 0 4284 189 44 43 chr20 4769327 4769815 -67384067 - L1MB8 LINE L1 -4158 2268 1770 2151 141 0 0 chr20 4769815 4770112 -67383770 - AluSx SINE Alu -15 297 1 4284 189 44 43 chr20 4770112 4770178 -67383704 - L1MB8 LINE L1 -4656 1770 1706 6830 166 56 44 chr20 4770226 4771693 -67382189 - L1MCa LINE L1 -4935 1491 7 2501 235 60 16 chr20 4771679 4771754 -67382128 - L1M4 LINE L1 -1816 5141 5071 * 438 36 0 0 chr20 4771754 4771810 -67382072 + (TG)n Simple_repeat Simple_repeat 2 57 0 2501 235 60 16 chr20 4771810 4772435 -67381447 - L1M4 LINE L1 -1886 5071 4410 1282 179 20 32 chr20 4772450 4772701 -67381181 - AluJo SINE Alu -11 301 54 2112 242 47 22 chr20 4772723 4773534 -67380348 - L1M4 LINE L1 -2566 4391 3561 2415 77 0 10 chr20 4773541 4773838 -67380044 - AluY SINE Alu -17 294 1 2743 215 26 72 chr20 4773842 4774559 -67379323 - L1M4 LINE L1 -4659 2300 1659 2226 107 7 0 chr20 4774559 4774848 -67379034 + AluSc SINE Alu 1 291 -18 2743 215 26 72 chr20 4774848 4775284 -67378598 - L1M4 LINE L1 -5300 1659 1205 2042 288 32 25 chr20 4775827 4776668 -67377214 - L1M4 LINE L1 -5914 945 29 1051 287 158 25 chr20 4776741 4777006 -67376876 + L2 LINE L2 2460 2688 -625 2209 151 100 5 chr20 4777006 4777397 -67376485 + MSTA LTR MaLR 1 428 0 1051 287 158 25 chr20 4777397 4777899 -67375983 + L2 LINE L2 2688 3313 0 458 219 185 14 chr20 4778888 4779034 -67374848 + MER5A DNA MER1_type 18 188 -1 493 221 106 0 chr20 4779042 4779155 -67374727 + MER58A DNA MER1_type 1 125 0 2234 158 49 30 chr20 4779155 4779677 -67374205 + MLT2A2 LTR ERVL 1 554 0 649 158 0 0 chr20 4779677 4779770 -67374112 + MER58A DNA MER1_type 121 213 -11 228 237 34 17 chr20 4780095 4780154 -67373728 + L2 LINE L2 3205 3264 -8 329 241 85 42 chr20 4780269 4780404 -67373478 - MIR SINE MIR -63 145 19 346 332 71 33 chr20 4781017 4781354 -67372528 + LTR16C LTR ERVL 121 470 -21 396 239 50 111 chr20 4781367 4781727 -67372155 - L1M4 LINE L1 -1907 4239 3902 2225 123 123 3 chr20 4781756 4782137 -67371745 - MSTA LTR MaLR 0 428 2 324 319 51 37 chr20 4782291 4782507 -67371375 - MLT1H LTR MaLR -300 249 31 299 226 52 43 chr20 4782537 4782652 -67371230 - L1M4 LINE L1 -2234 3912 3797 1945 179 40 37 chr20 4782997 4783543 -67370339 + MLT2A2 LTR ERVL 3 554 0 2477 161 38 5 chr20 4783549 4783971 -67369911 + MLT1C LTR MaLR 29 464 -3 217 306 14 0 chr20 4784380 4784452 -67369430 - MIR SINE MIR -109 153 81 2022 159 34 41 chr20 4784484 4784805 -67369077 - L1PB4 LINE L1 -7 6149 5830 1670 173 38 14 chr20 4784805 4785094 -67368788 - AluJb SINE Alu -16 296 1 2022 159 34 41 chr20 4785094 4785186 -67368696 - L1PB4 LINE L1 -326 5830 5739 458 272 89 19 chr20 4785224 4785382 -67368500 + MER117 DNA MER1_type 1 169 -28 271 276 100 119 chr20 4785997 4786131 -67367751 - L2 LINE L2 0 3272 3137 2428 67 0 0 chr20 4786131 4786428 -67367454 - AluY SINE Alu -14 297 1 271 276 100 119 chr20 4786428 4786604 -67367278 - L2 LINE L2 -135 3137 2968 316 260 156 21 chr20 4787193 4787289 -67366593 - L2 LINE L2 -1 3271 3163 1370 238 125 14 chr20 4787746 4788170 -67365712 + MLT1H LTR MaLR 43 513 -36 2020 127 13 22 chr20 4788170 4788485 -67365397 - L1MC1 LINE L1 -1 6332 6021 484 284 71 31 chr20 4789702 4789927 -67363955 + MLT1K LTR MaLR 332 565 -23 267 233 0 44 chr20 4791017 4791107 -67362775 - LTR67 LTR ERVL -4 553 468 1631 301 60 2 chr20 4791107 4791645 -67362237 - MLT2E LTR ERVL 0 628 60 2290 112 3 0 chr20 4792093 4792388 -67361494 - AluSx SINE Alu -16 296 1 260 309 253 19 chr20 4792388 4792653 -67361229 + L3 LINE CR1 733 1059 -518 285 323 16 55 chr20 4793044 4793171 -67360711 + L3 LINE CR1 1397 1518 -59 620 227 116 17 chr20 4793943 4794115 -67359767 + MER5A DNA MER1_type 1 189 0 755 165 23 78 chr20 4794292 4794496 -67359386 + MER39B LTR ERV1 6 246 -461 1834 138 3 46 chr20 4794525 4794850 -67359032 + L1MA7 LINE L1 5398 5708 -583 3375 123 32 28 chr20 4794989 4795556 -67358326 + L1MA7 LINE L1 5720 6288 -3 3083 145 18 16 chr20 4795590 4796087 -67357795 + MER39 LTR ERV1 210 707 0 2211 116 0 3 chr20 4796624 4796926 -67356956 + AluSg SINE Alu 1 301 -9 1414 128 14 28 chr20 4798141 4798359 -67355523 - AluJo SINE Alu -95 217 3 2267 105 0 0 chr20 4798423 4798717 -67355165 - AluSg SINE Alu -14 296 3 1866 98 91 14 chr20 4799130 4799406 -67354476 + AluSx SINE Alu 1 297 -15 821 176 48 53 chr20 4799816 4800004 -67353878 - MER5A DNA MER1_type -2 187 1 849 168 0 142 chr20 4800326 4800457 -67353425 - AluJb SINE Alu -10 302 205 630 60 0 0 chr20 4800457 4800540 -67353342 - L1PB1 LINE L1 0 6151 6069 849 168 0 142 chr20 4800540 4800598 -67353284 - AluJb SINE Alu -107 205 140 1518 246 64 16 chr20 4800617 4801052 -67352830 - MLT1C LTR MaLR -1 466 11 469 204 78 131 chr20 4801196 4801387 -67352495 + MER5A DNA MER1_type 9 189 0 521 306 99 55 chr20 4801391 4802270 -67351612 - L1M4 LINE L1 -1243 4903 3982 388 266 63 67 chr20 4802295 4802802 -67351080 - L1MDa LINE L1 -961 1940 1296 875 180 17 45 chr20 4802934 4803112 -67350770 - MER5B DNA MER1_type -4 174 2 909 287 103 25 chr20 4803829 4804734 -67349148 + L1ME3 LINE L1 4931 5906 -256 2155 186 46 5 chr20 4804770 4805321 -67348561 + L1MC/D LINE L1 5156 5770 -472 311 217 0 29 chr20 4805321 4805390 -67348492 + LTR16C LTR ERVL 425 491 0 258 265 9 104 chr20 4805495 4805725 -67348157 + HAL1 LINE L1 953 1160 -1347 453 325 50 54 chr20 4805833 4806337 -67347545 - L1M4c LINE L1 -3235 3191 2690 4880 229 125 29 chr20 4806384 4807330 -67346552 + L1MD1 LINE L1 16 1155 -5385 2147 94 3 24 chr20 4807330 4807650 -67346232 + AluSq SINE Alu 2 315 0 4880 229 125 29 chr20 4807650 4808162 -67345720 + L1MD1 LINE L1 1155 1617 -4923 10768 25 0 0 chr20 4808172 4810131 -67343751 - L1PA2 LINE L1 0 6155 4196 11030 167 26 69 chr20 4810133 4812987 -67340895 + L1MD1 LINE L1 3338 6013 -623 2473 80 0 0 chr20 4812987 4813298 -67340584 + AluY SINE Alu 1 311 0 11030 167 26 69 chr20 4813298 4813881 -67340001 + L1MD1 LINE L1 6013 6619 -17 302 298 112 22 chr20 4813909 4814087 -67339795 - L1M4c LINE L1 -3959 2467 2274 443 277 162 16 chr20 4814447 4814677 -67339205 - L1M4c LINE L1 -839 1948 1481 406 145 0 0 chr20 4814781 4814843 -67339039 + L1MD2 LINE L1 6068 6129 -230 532 209 86 94 chr20 4814847 4815081 -67338801 + L2 LINE L2 3077 3308 -5 331 257 51 91 chr20 4815152 4815267 -67338615 + HAL1 LINE L1 992 1110 -1397 8067 65 31 2 chr20 4815267 4816246 -67337636 - LTR13 LTR ERVK 0 1007 1 331 257 51 91 chr20 4816246 4816383 -67337499 + HAL1 LINE L1 1110 1234 -1273 290 259 82 13 chr20 4816369 4816527 -67337355 - L1M4 LINE L1 -3126 3020 2852 * 4647 138 72 35 chr20 4817162 4817612 -67336270 - L1MA7 LINE L1 -6 6285 5853 2442 76 0 3 chr20 4817612 4817915 -67335967 - AluY SINE Alu -9 302 1 4647 138 72 35 chr20 4817915 4818356 -67335526 - L1MA7 LINE L1 -438 5853 5361 * 9107 154 43 7 chr20 4818354 4819945 -67333937 + L1 LINE L1 3656 5311 -835 207 0 0 0 chr20 4819945 4819968 -67333914 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9107 154 43 7 chr20 4819968 4820030 -67333852 + L1 LINE L1 5311 5369 -777 342 0 0 0 chr20 4820202 4820240 -67333642 + (TG)n Simple_repeat Simple_repeat 2 39 0 1649 175 51 7 chr20 4820693 4820985 -67332897 - AluJb SINE Alu -7 305 1 317 356 47 13 chr20 4821191 4821340 -67332542 + L1ME LINE L1 4673 4826 -1320 459 237 0 17 chr20 4821816 4821934 -67331948 + L1ME LINE L1 5567 5682 -439 261 163 0 0 chr20 4821956 4822005 -67331877 + (CA)n Simple_repeat Simple_repeat 2 50 0 1327 154 0 5 chr20 4822115 4822316 -67331566 + MER20 DNA MER1_type 20 219 0 222 267 0 0 chr20 4822614 4822674 -67331208 - MIR SINE MIR 0 262 203 264 228 176 29 chr20 4822784 4822920 -67330962 - L1ME4a LINE L1 -96 6025 5870 197 183 17 0 chr20 4823029 4823089 -67330793 + GA-rich Low_complexity Low_complexity 2 62 0 350 230 137 36 chr20 4823094 4823233 -67330649 + L1MC5 LINE L1 6957 7109 -852 181 229 0 42 chr20 4823269 4823317 -67330565 + L2 LINE L2 3227 3272 0 351 260 48 10 chr20 4824101 4824205 -67329677 - MIR3 SINE MIR -54 154 47 396 224 70 29 chr20 4824857 4825007 -67328875 + MIR SINE MIR 16 182 -62 26 0 0 0 chr20 4825915 4825941 -67327941 + AT_rich Low_complexity Low_complexity 1 26 0 247 325 103 0 chr20 4825989 4826106 -67327776 + MLT1J2 LTR MaLR 34 162 -288 333 265 12 12 chr20 4826137 4826220 -67327662 + MLT1I LTR MaLR 196 278 -131 243 339 42 0 chr20 4826347 4826465 -67327417 - MIR3 SINE MIR -53 155 33 245 311 56 0 chr20 4827249 4827339 -67326543 - L2 LINE L2 -18 3295 3201 1074 184 44 73 chr20 4827523 4827937 -67325945 - MLT1A1 LTR MaLR 0 396 1 293 361 28 7 chr20 4828053 4828197 -67325685 - L2 LINE L2 -507 2807 2661 454 328 31 0 chr20 4828634 4828762 -67325120 + MER91C DNA MER1_type 9 140 0 280 175 0 289 chr20 4828796 4828962 -67324920 + MER5B DNA MER1_type 59 176 -2 297 348 170 8 chr20 4828975 4829357 -67324525 + L2 LINE L2 1135 1578 -1736 591 235 184 26 chr20 4829444 4829678 -67324204 - MLT1H1 LTR MaLR 0 555 285 532 286 83 18 chr20 4829773 4829990 -67323892 - MLT1H1 LTR MaLR -244 305 75 1604 188 16 12 chr20 4830745 4831065 -67322817 + MER74C LTR ERVL 155 460 0 1117 303 85 16 chr20 4831899 4832344 -67321538 + LTR16C LTR ERVL 1 476 -15 2064 144 0 0 chr20 4832549 4832847 -67321035 - AluSx SINE Alu -14 298 1 231 114 0 0 chr20 4833377 4833412 -67320470 + (TG)n Simple_repeat Simple_repeat 2 36 0 1261 261 93 3 chr20 4833493 4833880 -67320002 - MLT2E LTR ERVL -206 422 1 307 363 109 11 chr20 4835082 4835459 -67318423 + L1ME4a LINE L1 5531 5944 -226 228 304 0 0 chr20 4835799 4835868 -67318014 + L2 LINE L2 1869 1937 -1377 1656 206 165 15 chr20 4835906 4836386 -67317496 - L1ME1 LINE L1 -34 6132 5581 2276 237 13 27 chr20 4836548 4837097 -67316785 + MER87 LTR ERV1 1 541 0 1887 199 36 117 chr20 4837401 4837789 -67316093 - MLT1E2 LTR MaLR 0 626 208 2846 62 84 77 chr20 4837789 4838243 -67315639 + L1PA7 LINE L1 5698 6154 0 1887 199 36 117 chr20 4838243 4838429 -67315453 - MLT1E2 LTR MaLR -418 208 103 962 236 56 87 chr20 4838429 4838612 -67315270 + MLT1C LTR MaLR 1 188 -279 2316 66 3 17 chr20 4838612 4838900 -67314982 + AluSp SINE Alu 30 313 0 962 236 56 87 chr20 4838900 4839198 -67314684 + MLT1C LTR MaLR 188 467 0 1887 199 36 117 chr20 4839198 4839240 -67314642 - MLT1E2 LTR MaLR -523 103 59 236 258 30 0 chr20 4839282 4839348 -67314534 - MLT1E2 LTR MaLR -434 71 4 419 281 98 38 chr20 4839351 4839586 -67314296 + L2 LINE L2 2478 2726 -588 597 300 34 39 chr20 4839586 4840015 -67313867 - MLT1J LTR MaLR 0 511 71 10539 74 21 0 chr20 4840138 4842294 -67311588 - L1PA7 LINE L1 -8 6146 3960 2201 125 10 3 chr20 4842296 4842601 -67311281 - AluSx SINE Alu -5 307 1 2000 105 3 46 chr20 4842712 4843018 -67310864 - AluSc SINE Alu -16 293 1 260 319 57 110 chr20 4843516 4843833 -67310049 + L2 LINE L2 2956 3255 -17 420 261 49 33 chr20 4843952 4844136 -67309746 + L1ME4a LINE L1 5931 6117 -4 297 75 0 0 chr20 4844176 4844216 -67309666 + (TG)n Simple_repeat Simple_repeat 1 40 0 868 200 65 28 chr20 4845034 4845249 -67308633 - MIR SINE MIR 0 262 40 567 224 133 7 chr20 4845624 4845767 -67308115 - MER5A DNA MER1_type -15 174 14 311 215 0 15 chr20 4846205 4846270 -67307612 + L2 LINE L2 3242 3305 -8 1941 146 73 6 chr20 4846391 4846734 -67307148 - L1MB5 LINE L1 -18 6156 5791 259 241 102 37 chr20 4846824 4846932 -67306950 + MER117 DNA MER1_type 81 195 -2 2461 199 0 0 chr20 4847507 4847925 -67305957 - MER47B DNA MER2_type 0 418 1 1934 151 13 10 chr20 4848945 4849080 -67304802 + AluSx SINE Alu 1 134 -178 2287 92 0 7 chr20 4849080 4849373 -67304509 + AluY SINE Alu 1 291 -20 1934 151 13 10 chr20 4849373 4849548 -67304334 + AluSx SINE Alu 134 312 0 238 309 89 16 chr20 4849957 4850080 -67303802 + MIR3 SINE MIR 12 143 -65 1260 254 40 27 chr20 4850184 4850266 -67303616 + L1MC4a LINE L1 4623 4702 -1444 1719 159 26 26 chr20 4850266 4850568 -67303314 + AluJb SINE Alu 1 302 -10 1260 254 40 27 chr20 4850568 4850841 -67303041 + L1MC4a LINE L1 4702 4986 -1160 2322 208 18 18 chr20 4850841 4851346 -67302536 + L1PA16 LINE L1 5657 6161 -5 1260 254 40 27 chr20 4851346 4851390 -67302492 + L1MC4a LINE L1 4986 5028 -1118 2342 95 7 0 chr20 4851634 4851940 -67301942 + AluSp SINE Alu 1 308 -5 2359 113 0 0 chr20 4852358 4852668 -67301214 - AluSx SINE Alu -2 310 1 234 205 145 24 chr20 4852673 4852756 -67301126 + MIR SINE MIR 61 153 -55 1760 130 23 0 chr20 4853987 4854249 -67299633 - AluSx SINE Alu -13 299 32 2379 106 3 3 chr20 4854749 4855061 -67298821 + AluSq SINE Alu 1 312 -1 184 250 0 0 chr20 4855153 4855197 -67298685 + MIR SINE MIR 61 104 -104 435 320 74 25 chr20 4855528 4855772 -67298110 + L1MC4a LINE L1 5391 5646 -2162 290 235 51 31 chr20 4855827 4855925 -67297957 + L1MC4a LINE L1 5862 5961 -1847 23 0 0 0 chr20 4856075 4856098 -67297784 + AT_rich Low_complexity Low_complexity 1 23 0 345 294 18 29 chr20 4856733 4856903 -67296979 + GA-rich Low_complexity Low_complexity 5 172 0 585 243 28 34 chr20 4858208 4858385 -67295497 + LTR16A1 LTR ERVL 282 457 0 1982 131 14 0 chr20 4858479 4858762 -67295120 - AluSx SINE Alu -25 287 1 198 254 18 0 chr20 4859326 4859381 -67294501 - L2 LINE L2 -1 3271 3216 314 318 170 35 chr20 4860234 4860727 -67293155 - L2 LINE L2 -782 2532 1942 1362 178 100 92 chr20 4860727 4861097 -67292785 + MLT1A2 LTR MaLR 1 373 -1 314 318 170 35 chr20 4861097 4861203 -67292679 - L2 LINE L2 -1372 1942 1852 1754 161 3 40 chr20 4862612 4862911 -67290971 - AluJo SINE Alu -24 288 1 276 262 159 16 chr20 4863358 4863484 -67290398 + MIR SINE MIR 2 145 -117 3686 147 2 2 chr20 4863558 4864131 -67289751 + L1PA16 LINE L1 5585 6157 -9 2242 122 3 6 chr20 4864133 4864444 -67289438 + AluSx SINE Alu 1 310 -2 1887 182 8 32 chr20 4865278 4865652 -67288230 - MLT1A1 LTR MaLR 0 365 1 207 271 0 0 chr20 4866166 4866214 -67287668 + L2 LINE L2 3217 3264 -8 1148 203 206 30 chr20 4866614 4866949 -67286933 + MSTD LTR MaLR 1 394 -2 296 209 0 0 chr20 4868204 4868271 -67285611 - L1MC1 LINE L1 -4 6329 6263 750 253 65 65 chr20 4868285 4868546 -67285336 - MER77 LTR ERV1 -291 314 54 1691 292 107 20 chr20 4868961 4870234 -67283648 + L1ME4a LINE L1 2877 4260 -1886 279 250 75 66 chr20 4870636 4870773 -67283109 + L1ME4a LINE L1 5858 5999 -122 2189 118 10 0 chr20 4870773 4871070 -67282812 + AluSx SINE Alu 5 304 -8 279 250 75 66 chr20 4871070 4871160 -67282722 + L1ME4a LINE L1 5999 6087 -34 270 224 0 0 chr20 4872449 4872498 -67281384 - MER91 DNA MER1_type -3 137 89 589 256 26 6 chr20 4872987 4873143 -67280739 - MIR SINE MIR 0 262 104 369 178 204 25 chr20 4873192 4873341 -67280541 + MLT1H LTR MaLR 53 310 -239 383 226 151 95 chr20 4873617 4873922 -67279960 - MER90 LTR ERV1 -219 356 35 274 30 0 0 chr20 4874425 4874458 -67279424 + MADE1 DNA Mariner 6 38 -42 251 266 32 21 chr20 4875192 4875286 -67278596 + HAL1b LINE L1 469 563 -785 388 85 34 0 chr20 4875292 4875351 -67278531 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4875352 4875472 -67278410 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4875518 4875649 -67278233 + (TA)n Simple_repeat Simple_repeat 2 140 0 222 191 0 0 chr20 4875670 4875717 -67278165 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1776 160 66 0 chr20 4875846 4876165 -67277717 - MLT2C1 LTR ERVL -57 340 1 1253 134 0 0 chr20 4876209 4876381 -67277501 + AluSp SINE Alu 134 305 -8 22 0 0 0 chr20 4876751 4876773 -67277109 + AT_rich Low_complexity Low_complexity 1 22 0 909 190 0 22 chr20 4876895 4877074 -67276808 + MER5B DNA MER1_type 4 178 0 214 242 0 16 chr20 4877222 4877284 -67276598 + MER5A DNA MER1_type 9 69 -120 3459 154 43 60 chr20 4877421 4878124 -67275758 + LTR8 LTR ERV1 1 691 0 322 380 68 30 chr20 4878225 4878442 -67275440 + L2 LINE L2 2850 3088 -184 5366 76 18 7 chr20 4878442 4879176 -67274706 + L1PA13 LINE L1 5419 6160 -3 322 380 68 30 chr20 4879176 4879324 -67274558 + L2 LINE L2 3088 3229 -43 1301 254 80 15 chr20 4880296 4880773 -67273109 + HAL1 LINE L1 1705 2212 -295 5382 136 12 16 chr20 4880836 4881682 -67272200 + MER4D LTR ERV1 62 903 0 377 289 122 31 chr20 4881682 4882402 -67271480 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4882432 4882523 -67271359 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 254 291 108 55 chr20 4882584 4882982 -67270900 + L1 LINE L1 2409 2827 -3319 277 296 49 0 chr20 4883027 4883108 -67270774 + MER5A DNA MER1_type 10 94 -95 928 322 61 70 chr20 4883179 4883311 -67270571 + L1 LINE L1 2932 3064 -3082 2319 75 7 0 chr20 4883311 4883637 -67270245 - AluSp SINE Alu 0 328 1 928 322 61 70 chr20 4883637 4884446 -67269436 + L1 LINE L1 3064 3868 -2278 2108 128 67 22 chr20 4884446 4884805 -67269077 + THE1C LTR MaLR 1 375 0 928 322 61 70 chr20 4884805 4884865 -67269017 + L1 LINE L1 3868 3927 -2219 408 334 52 30 chr20 4884905 4885309 -67268573 + L1 LINE L1 4067 4479 -1667 882 283 111 24 chr20 4885392 4885816 -67268066 + MLT1L LTR MaLR 155 615 0 351 269 155 56 chr20 4886142 4886588 -67267294 - L1M4 LINE L1 -2919 3227 2738 1432 286 46 21 chr20 4887338 4887814 -67266068 + LTR16C LTR ERVL 4 491 0 180 364 81 62 chr20 4888322 4888531 -67265351 + L2 LINE L2 3030 3242 -30 1144 240 86 26 chr20 4888952 4889796 -67264086 + L1MEc LINE L1 1951 2896 -3319 272 293 55 67 chr20 4892220 4892488 -67261394 + MIR3 SINE MIR 3 259 -3 228 259 129 24 chr20 4893549 4893634 -67260248 + L2 LINE L2 2885 2978 -294 189 289 0 0 chr20 4893741 4893793 -67260089 - L3b LINE CR1 -3 1580 1529 360 0 0 0 chr20 4893953 4893993 -67259889 + (CA)n Simple_repeat Simple_repeat 2 41 0 1170 151 16 0 chr20 4895120 4895306 -67258576 + AluSg/x SINE Alu 104 292 -20 818 179 68 6 chr20 4895373 4895535 -67258347 - LTR37B LTR ERV1 -289 179 8 506 317 85 55 chr20 4896133 4896590 -67257292 + L2 LINE L2 2817 3287 -26 184 297 0 68 chr20 4896743 4896817 -67257065 + L2 LINE L2 3204 3272 0 193 204 250 0 chr20 4897039 4897127 -67256755 + MIR3 SINE MIR 3 112 -96 5976 60 23 4 chr20 4897325 4898077 -67255805 - MER4E LTR ERV1 0 766 1 1827 147 18 0 chr20 4898161 4898447 -67255435 - AluJo SINE Alu -21 291 1 22 0 0 0 chr20 4898470 4898492 -67255390 + AT_rich Low_complexity Low_complexity 1 22 0 789 72 0 0 chr20 4898492 4898589 -67255293 - L1PA6 LINE L1 -7 6147 6051 5094 174 38 35 chr20 4899342 4900518 -67253364 + L1MA9 LINE L1 5127 6312 0 22 56 0 0 chr20 4900644 4900680 -67253202 + AT_rich Low_complexity Low_complexity 1 36 0 208 250 19 0 chr20 4900890 4900942 -67252940 + (TG)n Simple_repeat Simple_repeat 2 54 0 584 274 150 0 chr20 4901740 4901893 -67251989 - MER5A DNA MER1_type 0 189 14 255 303 68 68 chr20 4902236 4902398 -67251484 + MIR SINE MIR 31 192 -70 280 252 0 103 chr20 4902829 4902936 -67250946 + MER117 DNA MER1_type 2 97 -100 189 188 0 83 chr20 4903238 4903286 -67250596 - L2 LINE L2 -18 3295 3252 417 109 0 0 chr20 4903747 4903811 -67250071 + (T)n Simple_repeat Simple_repeat 1 64 0 240 335 36 85 chr20 4904240 4904712 -67249170 + L2 LINE L2 2817 3265 -7 1699 251 97 40 chr20 4904764 4905446 -67248436 - MER21B LTR ERV1 -130 733 13 729 252 34 101 chr20 4905526 4905970 -67247912 + L1ME4a LINE L1 5491 5904 -217 329 193 165 0 chr20 4905974 4906083 -67247799 + L1ME4a LINE L1 5993 6119 -2 3503 211 62 16 chr20 4906839 4907693 -67246189 + MER97a DNA MER1_type 2 894 0 378 279 93 31 chr20 4907878 4908039 -67245843 + MIR SINE MIR 16 186 -76 390 326 31 0 chr20 4908788 4908917 -67244965 - MER94 DNA DNA -1 133 1 2115 113 3 35 chr20 4909013 4909323 -67244559 + AluSx SINE Alu 1 300 -12 322 304 45 0 chr20 4909946 4910058 -67243824 - MER103 DNA DNA -47 119 3 558 229 16 100 chr20 4911098 4911222 -67242660 - MLT1H LTR MaLR -25 406 273 243 0 0 0 chr20 4911222 4911249 -67242633 + (CTGGGG)n Simple_repeat Simple_repeat 3 29 0 558 229 16 100 chr20 4911249 4911547 -67242335 - MLT1H LTR MaLR -158 273 1 1149 203 0 5 chr20 4913150 4913357 -67240525 + MER3 DNA MER1_type 2 207 -2 1543 231 73 86 chr20 4914660 4915259 -67238623 - MER77 LTR ERV1 -1 604 41 365 314 123 8 chr20 4915264 4915516 -67238366 + L1ME3 LINE L1 4960 5240 -906 236 186 23 0 chr20 4915605 4915648 -67238234 + L1P5 LINE L1 5529 5572 -584 379 316 204 16 chr20 4915718 4916022 -67237860 + L1MC4a LINE L1 5626 5986 -1822 1707 291 53 17 chr20 4916196 4916797 -67237085 + MLT2E LTR ERVL 6 628 0 231 158 50 0 chr20 4916813 4916926 -67236956 + (TA)n Simple_repeat Simple_repeat 2 123 -4 186 71 0 0 chr20 4916926 4916954 -67236928 + (TG)n Simple_repeat Simple_repeat 1 28 0 231 158 50 0 chr20 4916954 4916960 -67236922 + (TA)n Simple_repeat Simple_repeat 123 127 0 39598 81 6 8 chr20 4917428 4923579 -67230303 - L1PA6 LINE L1 -3 6151 11 302 246 220 34 chr20 4923601 4923719 -67230163 - MIR SINE MIR -70 192 53 314 267 75 54 chr20 4923975 4924223 -67229659 - MLT1H LTR MaLR -137 272 19 2202 241 72 16 chr20 4924390 4924946 -67228936 - MLT1G1 LTR MaLR -8 587 1 469 266 83 52 chr20 4925315 4925507 -67228375 - MIR SINE MIR -6 256 59 723 210 14 0 chr20 4925914 4926052 -67227830 + MER5B DNA MER1_type 39 178 0 314 201 93 50 chr20 4926194 4926333 -67227549 + L2 LINE L2 3076 3220 -93 287 297 54 0 chr20 4926335 4926409 -67227473 - MER91C DNA MER1_type -32 108 31 437 283 38 0 chr20 4926415 4926521 -67227361 + L2 LINE L2 3203 3312 -1 336 119 0 0 chr20 4926606 4926665 -67227217 + (CAT)n Simple_repeat Simple_repeat 3 61 0 291 309 12 12 chr20 4926802 4926883 -67226999 + MIR SINE MIR 29 109 -153 325 173 58 10 chr20 4926948 4927046 -67226836 + L1ME3 LINE L1 5367 5478 -764 802 271 123 17 chr20 4927049 4927482 -67226400 - MLT1J2 LTR MaLR 0 450 1 421 338 82 17 chr20 4927483 4927900 -67225982 + L1ME3 LINE L1 5486 5929 -233 201 231 0 0 chr20 4928002 4928041 -67225841 + GA-rich Low_complexity Low_complexity 3 41 0 2897 179 9 38 chr20 4928113 4928693 -67225189 + L1MB4 LINE L1 5618 6180 0 429 253 126 44 chr20 4929719 4929901 -67223981 + MIR SINE MIR 63 259 -3 1965 208 177 31 chr20 4930066 4930682 -67223200 - MER21B LTR ERV1 -124 739 34 197 284 45 15 chr20 4930818 4930885 -67222997 + MIR3 SINE MIR 114 182 -26 2872 198 109 28 chr20 4931051 4931840 -67222042 - L1ME3 LINE L1 0 6162 5310 212 302 0 31 chr20 4931880 4931976 -67221906 - MIR SINE MIR -70 192 100 1653 236 106 6 chr20 4932794 4933341 -67220541 - L1ME3 LINE L1 -93 6069 5468 310 229 51 76 chr20 4933938 4934056 -67219826 + L2 LINE L2 3158 3272 0 296 265 102 65 chr20 4934262 4934507 -67219375 + L2 LINE L2 2288 2541 -773 230 343 0 0 chr20 4934483 4934553 -67219329 - L2 LINE L2 0 3313 3244 * 205 314 0 0 chr20 4935441 4935492 -67218390 + polypyrimidine Low_complexity Low_complexity 1 51 0 467 255 113 14 chr20 4936618 4936759 -67217123 - MIR SINE MIR -103 159 5 283 219 135 0 chr20 4936791 4936887 -67216995 + MIR SINE MIR 146 254 -8 180 182 0 0 chr20 4936928 4936972 -67216910 + GA-rich Low_complexity Low_complexity 3 46 0 1947 148 3 16 chr20 4937821 4938126 -67215756 - AluJb SINE Alu -11 301 1 407 200 200 21 chr20 4938272 4938412 -67215470 - MIR SINE MIR -14 248 84 2475 74 0 0 chr20 4939306 4939605 -67214277 - AluSg SINE Alu -11 299 1 510 230 146 6 chr20 4939605 4939783 -67214099 - Charlie4a DNA MER1_type -8 500 298 752 242 204 4 chr20 4939783 4940052 -67213830 - MER5C DNA MER1_type 0 324 2 899 231 60 40 chr20 4940054 4940352 -67213530 - Charlie4a DNA MER1_type -204 304 1 270 336 92 0 chr20 4940812 4940931 -67212951 - MIR SINE MIR -15 247 118 2580 228 3 17 chr20 4942067 4942770 -67211112 + L1MB5 LINE L1 4068 4760 -1386 3733 175 64 41 chr20 4942795 4944302 -67209580 + MER52A LTR ERV1 1 1755 0 1810 198 18 11 chr20 4944302 4944751 -67209131 + L1MB5 LINE L1 4773 5224 -922 277 40 60 20 chr20 4944751 4944801 -67209081 + T-rich Low_complexity Low_complexity 1 52 0 2569 43 0 0 chr20 4944801 4945126 -67208756 - L1PA4 LINE L1 -24 6131 5807 2970 205 28 2 chr20 4945129 4946027 -67207855 + L1MB5 LINE L1 5219 6166 -8 745 239 72 5 chr20 4946133 4946342 -67207540 - Charlie4 DNA MER1_type -1666 295 73 1060 228 9 9 chr20 4946490 4946714 -67207168 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr20 4946878 4946903 -67206979 + AT_rich Low_complexity Low_complexity 1 25 0 273 324 30 0 chr20 4946920 4947055 -67206827 + L1MDa LINE L1 34 618 -5912 913 235 71 45 chr20 4947280 4947310 -67206572 - MLT2B3 LTR ERVL -10 544 516 531 0 0 0 chr20 4947310 4947369 -67206513 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 913 235 71 45 chr20 4947369 4947606 -67206276 - MLT2B3 LTR ERVL -38 516 270 546 235 38 0 chr20 4947758 4947890 -67205992 + MLT1A2 LTR MaLR 238 374 0 2543 243 41 28 chr20 4947890 4948691 -67205191 + L1ME1 LINE L1 5338 6149 -17 1779 214 31 31 chr20 4948728 4949182 -67204700 + L1MA9 LINE L1 8 461 -6569 2444 219 5 21 chr20 4949230 4949886 -67203996 + L1MA9 LINE L1 1829 2473 -4564 * 8805 174 57 32 chr20 4949877 4952505 -67201377 + L1MA9 LINE L1 4075 6794 -478 465 66 0 0 chr20 4952505 4952566 -67201316 + (CA)n Simple_repeat Simple_repeat 1 61 0 8805 174 57 32 chr20 4952566 4953043 -67200839 + L1MA9 LINE L1 6794 7258 -14 2007 120 29 0 chr20 4953165 4953474 -67200408 + AluSx SINE Alu 1 317 0 226 366 114 13 chr20 4953609 4953836 -67200046 + L2 LINE L2 2804 3053 -219 3022 92 2 31 chr20 4954372 4954828 -67199054 + L1PA13 LINE L1 5702 6144 -19 277 345 45 0 chr20 4954837 4954947 -67198935 - MIR SINE MIR -57 151 37 193 150 0 50 chr20 4954961 4955021 -67198861 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 257 320 87 0 chr20 4955832 4955935 -67197947 - MIR SINE MIR -32 230 119 2274 190 66 34 chr20 4955966 4956418 -67197464 - L1MB7 LINE L1 -277 5907 5471 1888 181 3 0 chr20 4956418 4956716 -67197166 - AluJo SINE Alu -13 299 1 2274 190 66 34 chr20 4956716 4956842 -67197040 - L1MB7 LINE L1 -713 5471 5351 2157 112 7 0 chr20 4956842 4957137 -67196745 - AluSx SINE Alu -15 297 1 2274 190 66 34 chr20 4957137 4957227 -67196655 - L1MB7 LINE L1 -833 5351 5207 862 196 61 17 chr20 4957224 4957454 -67196428 + L1MB7 LINE L1 5940 6179 -5 * 27 0 0 0 chr20 4957694 4957721 -67196161 + AT_rich Low_complexity Low_complexity 1 27 0 8644 168 19 23 chr20 4957728 4959929 -67193953 + L1MA9 LINE L1 3471 5680 -632 2257 110 0 0 chr20 4959929 4960229 -67193653 + AluSx SINE Alu 1 300 -12 2212 131 0 0 chr20 4960229 4960541 -67193341 + AluSx SINE Alu 1 312 0 8644 168 19 23 chr20 4960541 4960941 -67192941 + L1MA9 LINE L1 5678 6064 -248 264 105 0 0 chr20 4960941 4960979 -67192903 + LTR16C LTR ERVL 454 491 0 250 255 51 31 chr20 4961787 4961885 -67191997 - LTR67 LTR ERVL -47 510 411 1118 288 33 40 chr20 4962410 4962833 -67191049 + LTR16C LTR ERVL 51 470 -21 514 269 35 46 chr20 4963106 4963303 -67190579 - ERVL LTR ERVL -1106 4658 4464 1144 344 44 24 chr20 4963683 4964552 -67189330 - ERVL LTR ERVL -1716 3938 3053 24 53 0 0 chr20 4964720 4964758 -67189124 + AT_rich Low_complexity Low_complexity 1 38 0 447 244 23 54 chr20 4964902 4965123 -67188759 - L1M4 LINE L1 -2593 3553 3340 4312 166 35 14 chr20 4965124 4965292 -67188590 - L1MA10 LINE L1 -2 6332 6169 315 0 0 0 chr20 4965292 4965327 -67188555 + (TG)n Simple_repeat Simple_repeat 1 35 0 4312 166 35 14 chr20 4965327 4966016 -67187866 - L1MA10 LINE L1 -165 6169 5457 6215 211 18 9 chr20 4966016 4967385 -67186497 - L1MA10 LINE L1 -2106 4040 2655 1499 104 45 0 chr20 4967385 4967605 -67186277 + MER30 DNA MER1_type 1 230 0 6215 211 18 9 chr20 4967605 4967702 -67186180 - L1MA10 LINE L1 -3491 2655 2560 1496 221 63 49 chr20 4967709 4967924 -67185958 - MER74A LTR ERVL 0 558 348 420 97 0 0 chr20 4967924 4967986 -67185896 + (TG)n Simple_repeat Simple_repeat 1 62 0 1496 221 63 49 chr20 4967986 4968264 -67185618 - MER74A LTR ERVL -210 348 58 345 198 99 12 chr20 4968280 4968361 -67185521 - MER74A LTR ERVL -470 88 1 265 216 9 54 chr20 4968391 4968502 -67185380 - L1M4 LINE L1 -2846 3300 3195 483 270 69 29 chr20 4968757 4968931 -67184951 + MER5A DNA MER1_type 6 186 -3 624 275 11 11 chr20 4970049 4970227 -67183655 - MIR SINE MIR 0 262 85 1823 231 59 12 chr20 4970227 4970733 -67183149 - MLT1H LTR MaLR 0 549 20 216 0 0 0 chr20 4970736 4970760 -67183122 + (T)n Simple_repeat Simple_repeat 1 24 0 351 366 0 8 chr20 4971719 4971850 -67182032 + MIR3 SINE MIR 64 193 -15 447 218 0 0 chr20 4971850 4971951 -67181931 + CT-rich Low_complexity Low_complexity 1 101 0 1155 81 0 27 chr20 4971951 4972136 -67181746 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1361 159 0 17 chr20 4972185 4972417 -67181465 - AluJb SINE Alu -83 229 2 338 197 26 0 chr20 4972760 4972836 -67181046 + Charlie2 DNA MER1_type 67 144 -2638 21 89 0 0 chr20 4972916 4972972 -67180910 + AT_rich Low_complexity Low_complexity 1 56 0 444 280 188 14 chr20 4972986 4973268 -67180614 + Charlie2 DNA MER1_type 251 581 -2201 359 337 88 0 chr20 4973270 4973451 -67180431 + Charlie2b DNA MER1_type 474 670 -2112 4202 202 53 31 chr20 4973520 4974844 -67179038 + Charlie2a DNA MER1_type 1466 2818 -44 433 291 9 1 chr20 4976262 4976389 -67177493 + MIR SINE MIR 31 157 -69 573 269 164 39 chr20 4977989 4978483 -67175399 + L1MC/D LINE L1 2687 3242 -2904 338 225 11 56 chr20 4978570 4978659 -67175223 + MLT1J LTR MaLR 104 188 -323 262 273 31 37 chr20 4978665 4978826 -67175056 + L1MC/D LINE L1 5327 5486 -2322 632 262 61 0 chr20 4978833 4978997 -67174885 - MIR SINE MIR 0 262 89 472 306 86 4 chr20 4979000 4979232 -67174650 + L1MC/D LINE L1 5487 5737 -2071 5604 206 52 11 chr20 4979352 4981777 -67172105 + L1MC3 LINE L1 4024 5403 -743 339 46 11 218 chr20 4981802 4981863 -67172019 + L1MC3 LINE L1 6882 6922 -863 3803 169 35 3 chr20 4981863 4982579 -67171303 - L1MD1 LINE L1 0 6242 5504 339 46 11 218 chr20 4982579 4982604 -67171278 + L1MC3 LINE L1 6922 6950 -835 379 307 24 0 chr20 4982609 4982736 -67171146 - LTR33 LTR ERVL -391 130 1 1532 259 64 74 chr20 4983165 4983851 -67170031 - MER21B LTR ERV1 -150 713 35 268 270 119 16 chr20 4985300 4985426 -67168456 - L2 LINE L2 0 3272 3134 629 239 103 97 chr20 4985898 4986237 -67167645 - MLT1H LTR MaLR 0 549 209 1500 254 17 0 chr20 4986240 4986595 -67167287 + MLT1E2-int LTR MaLR 246 606 -765 928 233 35 170 chr20 4986828 4987494 -67166388 + MLT1E2-int LTR MaLR 692 1267 -104 690 167 25 0 chr20 4987510 4987630 -67166252 - L1MB1 LINE L1 0 6168 6046 3431 150 43 29 chr20 4987630 4987765 -67166117 + L1MB1 LINE L1 5352 5484 -684 2186 118 0 16 chr20 4987765 4988069 -67165813 + AluSx SINE Alu 1 299 -13 3431 150 43 29 chr20 4988069 4988588 -67165294 + L1MB1 LINE L1 5484 6015 -153 486 236 49 0 chr20 4988593 4988716 -67165166 + MLT1E2-int LTR MaLR 1243 1371 0 2228 210 87 19 chr20 4988798 4989337 -67164545 + MLT1E2 LTR MaLR 51 626 0 717 182 135 0 chr20 4989337 4989485 -67164397 - MLT1H LTR MaLR -341 208 41 2019 165 91 10 chr20 4990688 4991082 -67162800 - MSTB LTR MaLR 0 426 1 1248 117 12 0 chr20 4992005 4992176 -67161706 - AluSg/x SINE Alu -16 296 124 243 237 92 13 chr20 4992232 4992308 -67161574 - MLT1H LTR MaLR -15 580 499 * 584 279 49 102 chr20 4992304 4992607 -67161275 - MLT1H LTR MaLR -195 354 70 2457 177 19 2 chr20 4992607 4993026 -67160856 - MSTB LTR MaLR 0 426 1 584 279 49 102 chr20 4993026 4993066 -67160816 - MLT1H LTR MaLR -479 70 29 276 312 85 38 chr20 4993115 4993434 -67160448 - L2 LINE L2 -251 3062 2719 604 314 108 23 chr20 4993449 4993876 -67160006 - MLT1L LTR MaLR -14 601 139 403 237 69 15 chr20 4993974 4994105 -67159777 - MLT1L LTR MaLR -410 139 2 183 100 0 0 chr20 4994133 4994163 -67159719 + (CA)n Simple_repeat Simple_repeat 2 31 0 1198 283 57 31 chr20 4994257 4994573 -67159309 - MLT1D LTR MaLR 0 505 170 1305 118 62 153 chr20 4994573 4994912 -67158970 - AluYb8 SINE Alu 0 308 1 1198 283 57 31 chr20 4994912 4995083 -67158799 - MLT1D LTR MaLR -335 170 5 199 348 61 17 chr20 4996095 4996210 -67157672 + MIR SINE MIR 34 153 -55 842 243 82 12 chr20 4996219 4996462 -67157420 + Charlie4a DNA MER1_type 4 263 -245 750 150 50 0 chr20 4996470 4996590 -67157292 + FLAM_C SINE Alu 2 127 -16 437 233 61 22 chr20 4996607 4996787 -67157095 + Charlie4a DNA MER1_type 253 439 -69 2294 120 0 0 chr20 4996834 4997143 -67156739 + AluSx SINE Alu 1 309 -3 311 275 44 9 chr20 4997226 4997341 -67156541 - MIR SINE MIR -87 121 2 679 261 124 0 chr20 4997369 4997603 -67156279 + L2 LINE L2 1441 1703 -1611 1674 206 102 80 chr20 4997608 4998077 -67155805 - MLT1F LTR MaLR -2 540 56 2262 119 51 20 chr20 4998077 4998430 -67155452 + THE1B LTR MaLR 1 364 0 1674 206 102 80 chr20 4998430 4998488 -67155394 - MLT1F LTR MaLR -486 56 1 1239 248 65 3 chr20 4998488 4998827 -67155055 + L2 LINE L2 1708 2067 -1247 282 283 91 36 chr20 4998887 4999106 -67154776 + HAL1 LINE L1 2014 2244 -263 416 194 32 0 chr20 4999121 4999214 -67154668 + HAL1 LINE L1 2296 2391 -116 747 277 130 36 chr20 4999736 5000606 -67153276 + L1MEc LINE L1 805 1651 -4564 567 108 0 0 chr20 5001828 5001921 -67151961 + (TTCC)n Simple_repeat Simple_repeat 2 94 0 2097 127 0 10 chr20 5001921 5002221 -67151661 - AluSx SINE Alu -15 297 1 2390 99 0 0 chr20 5002376 5002670 -67151212 + AluY SINE Alu 1 294 -17 286 252 153 0 chr20 5003314 5003445 -67150437 - L2 LINE L2 -2 3311 3161 363 305 163 17 chr20 5003709 5003942 -67149940 + LTR16C LTR ERVL 223 489 -2 585 355 59 20 chr20 5004007 5004060 -67149822 - L2 LINE L2 -199 3073 3024 2284 112 0 0 chr20 5004060 5004365 -67149517 + AluSx SINE Alu 1 305 -7 585 355 59 20 chr20 5004365 5004878 -67149004 - L2 LINE L2 -248 3024 2490 231 218 0 0 chr20 5005153 5005208 -67148674 + (ATG)n Simple_repeat Simple_repeat 2 56 0 2016 93 0 35 chr20 5005318 5005621 -67148261 + L1PA13 LINE L1 5862 6155 -8 2221 116 0 0 chr20 5005621 5005915 -67147967 - AluSx SINE Alu -18 294 1 206 301 19 78 chr20 5005967 5006070 -67147812 - L2 LINE L2 -621 2693 2597 888 267 94 1 chr20 5006076 5006500 -67147382 + LTR16C LTR ERVL 1 491 0 2348 194 67 9 chr20 5006828 5007364 -67146518 - MLT1F1 LTR MaLR 0 567 1 678 190 0 0 chr20 5007448 5007564 -67146318 + FRAM SINE Alu 41 156 -20 416 180 0 11 chr20 5007569 5007658 -67146224 + GA-rich Low_complexity Low_complexity 2 89 0 23 0 0 0 chr20 5008100 5008123 -67145759 + AT_rich Low_complexity Low_complexity 1 23 0 1481 240 63 30 chr20 5009102 5009424 -67144458 + Charlie4a DNA MER1_type 2 347 -1614 2155 116 0 14 chr20 5009424 5009718 -67144164 - AluSx SINE Alu -22 290 1 1481 240 63 30 chr20 5009718 5009886 -67143996 + Charlie4a DNA MER1_type 347 508 0 340 302 98 33 chr20 5010312 5010446 -67143436 - L1ME4a LINE L1 -161 5960 5836 2321 65 27 14 chr20 5010446 5010739 -67143143 + AluY SINE Alu 1 297 -14 340 302 98 33 chr20 5010739 5010849 -67143033 - L1ME4a LINE L1 -285 5836 5700 2296 117 0 0 chr20 5010849 5011147 -67142735 + AluSx SINE Alu 1 298 -14 252 232 87 0 chr20 5011189 5011258 -67142624 - MER116 DNA Mariner 0 80 6 338 310 86 76 chr20 5011275 5011975 -67141907 - L1ME4a LINE L1 -1316 4830 4124 1854 161 22 12 chr20 5012044 5012368 -67141514 + MLT1A1 LTR MaLR 39 365 0 22 35 0 0 chr20 5012577 5012606 -67141276 + AT_rich Low_complexity Low_complexity 1 29 0 305 265 68 0 chr20 5014811 5014928 -67138954 + MIR SINE MIR 100 224 -38 252 290 21 21 chr20 5014997 5015090 -67138792 + LTR16C LTR ERVL 79 171 -320 258 154 0 58 chr20 5015112 5015164 -67138718 - MLT2B1 LTR ERVL -8 512 464 249 246 0 0 chr20 5015166 5015231 -67138651 + (TATG)n Simple_repeat Simple_repeat 4 68 0 1339 206 148 35 chr20 5015237 5015668 -67138214 - MLT2B1 LTR ERVL -40 480 1 265 309 36 0 chr20 5015737 5015847 -67138035 + LTR16C LTR ERVL 349 462 -29 375 271 19 94 chr20 5017268 5017353 -67136529 - L1ME3A LINE L1 -234 5936 5846 2267 92 0 17 chr20 5017353 5017648 -67136234 - AluSx SINE Alu -20 292 3 375 271 19 94 chr20 5017648 5017828 -67136054 - L1ME3A LINE L1 -324 5846 5691 24 0 0 0 chr20 5017977 5018001 -67135881 + AT_rich Low_complexity Low_complexity 1 24 0 292 267 37 84 chr20 5018203 5018394 -67135488 - L1ME4a LINE L1 -3289 2857 2676 5392 119 19 57 chr20 5018400 5019475 -67134407 + L1PA12 LINE L1 5130 6168 0 181 163 41 0 chr20 5019509 5019558 -67134324 + CT-rich Low_complexity Low_complexity 2 52 0 2195 121 16 0 chr20 5019684 5019991 -67133891 - AluSx SINE Alu 0 312 1 370 340 111 17 chr20 5020038 5020335 -67133547 - L1ME4a LINE L1 -3600 2546 2222 5777 63 7 0 chr20 5020569 5021284 -67132598 - L1PA8 LINE L1 -1 6171 5452 267 182 105 127 chr20 5021678 5021859 -67132023 + MER104 DNA Tc2 1 177 -3 535 283 93 20 chr20 5021910 5022304 -67131578 - L1MDa LINE L1 -742 2159 1636 2220 115 7 0 chr20 5022514 5022809 -67131073 - AluSx SINE Alu -15 297 1 1172 188 43 59 chr20 5024398 5024701 -67129181 + AluJo SINE Alu 1 298 -4 276 119 0 0 chr20 5025866 5025908 -67127974 - AluJo SINE Alu -11 291 250 1215 185 4 89 chr20 5025928 5026209 -67127673 - AluJo SINE Alu -53 259 3 256 312 102 62 chr20 5026412 5026863 -67127019 - L1M4 LINE L1 -1003 5143 4712 1176 142 49 0 chr20 5026863 5027068 -67126814 - L1MA7 LINE L1 0 6291 6077 256 312 102 62 chr20 5027068 5027689 -67126193 - L1M4 LINE L1 -1434 4712 4027 824 176 149 5 chr20 5027818 5028006 -67125876 - AluJo SINE Alu -11 301 87 231 321 149 15 chr20 5028101 5028235 -67125647 + MIR SINE MIR 105 256 -6 2225 105 0 0 chr20 5028262 5028591 -67125291 - AluSq SINE Alu 0 329 1 447 104 15 0 chr20 5028633 5028700 -67125182 - MER41A LTR ERV1 -88 466 399 22 70 0 0 chr20 5028796 5028839 -67125043 + AT_rich Low_complexity Low_complexity 1 43 0 1455 101 22 40 chr20 5029217 5029445 -67124437 + AluSx SINE Alu 2 225 -87 689 229 108 54 chr20 5029528 5029825 -67124057 + L2 LINE L2 2995 3307 -6 351 213 0 0 chr20 5030087 5030167 -67123715 + (CA)n Simple_repeat Simple_repeat 1 80 0 637 235 117 5 chr20 5030383 5030596 -67123286 - MER115 DNA AcHobo 0 693 457 754 274 36 15 chr20 5030645 5030919 -67122963 - MER115 DNA AcHobo -322 371 92 699 156 0 0 chr20 5031534 5031643 -67122239 + L1MB5 LINE L1 6065 6173 -1 2234 132 3 0 chr20 5031651 5031961 -67121921 + AluSx SINE Alu 1 311 -1 1133 68 28 6 chr20 5031994 5032170 -67121712 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 211 122 24 0 chr20 5033176 5033217 -67120665 - L2 LINE L2 -556 2758 2717 846 228 53 0 chr20 5033229 5033435 -67120447 + MIR SINE MIR 12 228 -34 225 167 39 26 chr20 5033984 5034062 -67119820 + GA-rich Low_complexity Low_complexity 1 79 0 792 263 24 0 chr20 5034080 5034293 -67119589 + MIR SINE MIR 12 229 -33 2155 77 7 28 chr20 5034599 5034886 -67118996 + AluSx SINE Alu 1 281 -31 450 0 0 0 chr20 5034891 5034941 -67118941 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 271 32 0 0 chr20 5035539 5035570 -67118312 - L1M2 LINE L1 -425 5887 5857 278 149 0 0 chr20 5035571 5035618 -67118264 + L1MA7 LINE L1 6239 6285 -6 180 0 0 0 chr20 5035618 5035638 -67118244 + (CCA)n Simple_repeat Simple_repeat 3 22 0 203 255 0 0 chr20 5036432 5036479 -67117403 + L2 LINE L2 3252 3298 -15 431 192 35 17 chr20 5036880 5036989 -67116893 - MLT1C LTR MaLR -337 130 18 1064 210 70 18 chr20 5037391 5037619 -67116263 - MLT1C LTR MaLR 0 467 228 2934 133 13 49 chr20 5037619 5037937 -67115945 - MER39B LTR ERV1 0 653 360 2781 91 3 5 chr20 5037937 5038310 -67115572 - THE1C LTR MaLR 0 375 4 2934 133 13 49 chr20 5038310 5038524 -67115358 - MER39B LTR ERV1 -293 360 140 1053 166 29 46 chr20 5038562 5038803 -67115079 - MLT1C LTR MaLR -230 237 1 829 254 57 32 chr20 5038925 5039240 -67114642 + L1MDa LINE L1 18 340 -6200 687 233 17 80 chr20 5039368 5039589 -67114293 + L1MDa LINE L1 843 1043 -5500 2085 122 3 25 chr20 5039589 5039909 -67113973 + AluSq SINE Alu 1 313 0 687 233 17 80 chr20 5039909 5039975 -67113907 + L1MDa LINE L1 1043 1112 -5431 1051 151 32 21 chr20 5039976 5040162 -67113720 - MER21B LTR ERV1 -14 849 662 2651 110 75 54 chr20 5040162 5040645 -67113237 - LTR26B LTR ERV1 -1 530 38 33065 103 15 60 chr20 5040662 5044719 -67109163 - L1PA7 LINE L1 0 6154 2498 2549 64 0 10 chr20 5044719 5045030 -67108852 - AluY SINE Alu -3 308 1 33065 103 15 60 chr20 5045030 5047412 -67106470 - L1PA7 LINE L1 -3656 2498 12 477 114 0 14 chr20 5047432 5047502 -67106380 - LTR26E LTR ERV1 -553 69 1 * 2484 216 68 22 chr20 5047502 5048047 -67105835 - MER21B LTR ERV1 -197 666 97 284 198 119 89 chr20 5048157 5048258 -67105624 - MER21B LTR ERV1 -758 105 2 3535 210 94 66 chr20 5048273 5048602 -67105280 + L1MDa LINE L1 1259 1577 -4963 1902 169 0 3 chr20 5048602 5048915 -67104967 + AluJb SINE Alu 1 312 0 3535 210 94 66 chr20 5048915 5048933 -67104949 + L1MDa LINE L1 1577 1593 -4947 2410 97 3 0 chr20 5048933 5049242 -67104640 + AluSx SINE Alu 1 310 -2 3535 210 94 66 chr20 5049242 5050184 -67103698 + L1MDa LINE L1 1593 2586 -3954 1327 127 131 23 chr20 5050172 5050431 -67103451 + L1MA6 LINE L1 6014 6300 0 * 1470 232 36 27 chr20 5050402 5050846 -67103036 + L1MDa LINE L1 2539 2986 -3554 818 164 0 8 chr20 5050853 5050981 -67102901 + FLAM_C SINE Alu 1 127 -16 26 0 0 0 chr20 5051543 5051569 -67102313 + AT_rich Low_complexity Low_complexity 1 26 0 954 163 41 131 chr20 5051576 5051728 -67102154 - L1MA9 LINE L1 -1 6311 6202 303 28 0 0 chr20 5051728 5051764 -67102118 + (TG)n Simple_repeat Simple_repeat 1 36 0 954 163 41 131 chr20 5051764 5051931 -67101951 - L1MA9 LINE L1 -110 6202 6021 1108 134 18 55 chr20 5051931 5051979 -67101903 + L1 LINE L1 5086 5134 -1012 1672 187 14 14 chr20 5051979 5052273 -67101609 + AluJb SINE Alu 1 294 -18 1108 134 18 55 chr20 5052273 5052441 -67101441 + L1 LINE L1 5134 5294 -852 4205 131 43 49 chr20 5052842 5053631 -67100251 + LTR1 LTR ERV1 1 784 -1 235 235 144 15 chr20 5053894 5054026 -67099856 + L1M4 LINE L1 4472 4620 -1526 2151 98 4 0 chr20 5054130 5054405 -67099477 + AluSx SINE Alu 1 276 -36 193 0 61 30 chr20 5054639 5054672 -67099210 + (CAAAA)n Simple_repeat Simple_repeat 5 38 0 729 151 22 22 chr20 5055627 5055766 -67098116 - MER5A DNA MER1_type -23 166 28 429 248 0 9 chr20 5055797 5055906 -67097976 - MER5B DNA MER1_type -23 155 48 2135 112 53 36 chr20 5055927 5056285 -67097597 + THE1B LTR MaLR 1 364 0 3445 128 0 4 chr20 5056928 5057427 -67096455 - LOR1a LTR ERV1 0 497 1 574 271 135 10 chr20 5057463 5057766 -67096116 + L2 LINE L2 2875 3215 -98 1942 154 101 97 chr20 5057806 5058468 -67095414 + MER4A LTR ERV1 1 872 0 368 263 11 0 chr20 5059109 5059204 -67094678 - MER5A DNA MER1_type -84 105 10 2585 64 0 0 chr20 5060243 5060539 -67093343 + AluY SINE Alu 1 296 -15 2326 111 0 3 chr20 5061392 5061698 -67092184 - AluSq SINE Alu -8 305 1 350 286 153 20 chr20 5061901 5062097 -67091785 - HAL1 LINE L1 -5 2502 2281 579 266 47 18 chr20 5062139 5062417 -67091465 - HAL1 LINE L1 -328 2179 1894 243 233 35 95 chr20 5062590 5062706 -67091176 - Charlie8 DNA MER1_type -2217 200 92 2306 110 0 0 chr20 5062864 5063164 -67090718 + AluSx SINE Alu 1 300 -12 1631 238 36 44 chr20 5063792 5063839 -67090043 - LTR16C LTR ERVL -1 490 444 2327 107 0 0 chr20 5063839 5064149 -67089733 + AluSg SINE Alu 1 310 0 1631 238 36 44 chr20 5064149 5064551 -67089331 - LTR16C LTR ERVL -47 444 45 778 175 29 6 chr20 5064693 5064850 -67089032 - MLT1D LTR MaLR -361 144 1 817 160 0 0 chr20 5065963 5066094 -67087788 + FLAM_A SINE Alu 1 131 -2 1869 162 14 0 chr20 5066183 5066512 -67087370 - AluJb SINE Alu 0 333 1 285 206 19 136 chr20 5066753 5066908 -67086974 + L2 LINE L2 2931 3067 -246 429 234 14 0 chr20 5066950 5067054 -67086828 - L1ME2 LINE L1 -3 6163 6053 3912 177 29 4 chr20 5067061 5067762 -67086120 - MER44D DNA MER2_type -3 602 13 376 237 148 15 chr20 5068864 5068999 -67084883 + MIR SINE MIR 36 188 -74 15137 194 47 11 chr20 5069036 5071609 -67082273 + L1PB1 LINE L1 6 2485 -4382 2251 116 0 31 chr20 5071609 5071929 -67081953 + AluSx SINE Alu 1 310 -2 15137 194 47 11 chr20 5071929 5073856 -67080026 + L1PB1 LINE L1 2485 4341 -2526 2159 112 0 3 chr20 5073856 5074141 -67079741 + AluSq SINE Alu 1 284 -29 668 12 0 12 chr20 5074144 5074226 -67079656 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 15137 194 47 11 chr20 5074226 5076136 -67077746 + L1PB1 LINE L1 4342 6814 -53 2394 89 3 0 chr20 5076136 5076440 -67077442 + AluSg SINE Alu 1 305 -5 15137 194 47 11 chr20 5076440 5076475 -67077407 + L1PB1 LINE L1 6814 6846 -21 620 169 8 23 chr20 5076521 5076651 -67077231 - FRAM SINE Alu -6 170 43 524 174 0 11 chr20 5076657 5076749 -67077133 - AluJ/FLAM SINE Alu -218 94 4 225 0 0 0 chr20 5076894 5076919 -67076963 + (A)n Simple_repeat Simple_repeat 1 25 0 285 185 163 33 chr20 5076990 5077082 -67076800 + Charlie7 DNA MER1_type 2509 2612 0 2056 118 4 0 chr20 5077668 5077939 -67075943 + AluSq SINE Alu 3 274 -39 27 0 0 0 chr20 5077939 5077966 -67075916 + AT_rich Low_complexity Low_complexity 1 27 0 815 232 0 0 chr20 5078083 5078247 -67075635 + FRAM SINE Alu 7 170 -6 252 269 0 0 chr20 5078259 5078311 -67075571 - L2 LINE L2 -19 3294 3243 664 228 30 101 chr20 5078452 5078838 -67075044 + MLT1H LTR MaLR 95 467 0 485 302 168 19 chr20 5078880 5079305 -67074577 - L2 LINE L2 -231 3082 2590 461 220 74 60 chr20 5079522 5079709 -67074173 - MIR SINE MIR -3 259 59 242 265 68 26 chr20 5080794 5080911 -67072971 + LTR16C LTR ERVL 182 303 -188 310 221 126 11 chr20 5080941 5081036 -67072846 + LTR16C LTR ERVL 380 485 -6 778 170 0 15 chr20 5081158 5081293 -67072589 + FLAM_C SINE Alu 1 133 0 660 306 51 0 chr20 5081356 5081591 -67072291 - L1ME3 LINE L1 -2 6160 5914 1604 238 72 12 chr20 5081592 5082021 -67071861 - MLT1C LTR MaLR -4 463 9 699 273 61 4 chr20 5082026 5082304 -67071578 - L1ME3 LINE L1 -242 5920 5627 522 0 0 0 chr20 5082779 5082837 -67071045 + (TAAAA)n Simple_repeat Simple_repeat 4 61 0 1900 170 55 18 chr20 5082838 5083221 -67070661 - L1MB7 LINE L1 -33 6151 5754 2395 259 75 22 chr20 5083362 5084095 -67069787 - L1ME3 LINE L1 -30 6132 5361 483 261 80 29 chr20 5084208 5084547 -67069335 - L1ME3 LINE L1 -619 5543 5194 287 179 0 0 chr20 5084550 5084606 -67069276 - Alu SINE Alu -5 297 242 781 172 9 4 chr20 5084606 5084763 -67069119 - L1MB4 LINE L1 -159 6021 5867 1657 180 45 7 chr20 5084765 5085054 -67068828 - AluJb SINE Alu -12 300 1 6763 170 19 11 chr20 5085063 5086403 -67067479 - L1MC3 LINE L1 -1 7784 6335 2220 161 43 21 chr20 5086451 5086874 -67067008 - MSTB1 LTR MaLR 0 432 1 1106 168 0 0 chr20 5087511 5087678 -67066204 + FAM SINE Alu 1 167 -8 1528 132 0 0 chr20 5087711 5087939 -67065943 + AluSg/x SINE Alu 82 309 -1 268 330 191 0 chr20 5088758 5088931 -67064951 - L2 LINE L2 -102 3170 2965 2186 97 7 0 chr20 5089470 5089770 -67064112 + AluSc SINE Alu 1 302 -7 1395 272 28 6 chr20 5090800 5091160 -67062722 + LTR16C LTR ERVL 124 491 0 1882 119 3 11 chr20 5091262 5091602 -67062280 - AluSx SINE Alu 0 338 1 1146 133 6 17 chr20 5091638 5091819 -67062063 - AluJo SINE Alu -43 269 91 1685 189 0 0 chr20 5092761 5093052 -67060830 - AluJo SINE Alu -15 297 7 1800 150 7 7 chr20 5093743 5094036 -67059846 + AluJb SINE Alu 1 293 -19 2129 106 3 6 chr20 5094036 5094347 -67059535 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 5094670 5094691 -67059191 + AT_rich Low_complexity Low_complexity 1 21 0 997 212 33 0 chr20 5095038 5095250 -67058632 - MER20 DNA MER1_type 0 219 1 1780 150 11 0 chr20 5095927 5096214 -67057668 - AluJb SINE Alu -17 295 6 215 325 8 32 chr20 5096246 5096369 -67057513 + L2 LINE L2 2636 2755 -559 454 208 31 0 chr20 5096391 5096487 -67057395 + MER5A DNA MER1_type 11 109 -80 265 359 220 13 chr20 5096581 5096963 -67056919 + L2 LINE L2 2810 3270 -2 561 217 77 14 chr20 5097219 5097362 -67056520 - MER63A DNA MER1_type -6 204 53 217 348 43 0 chr20 5097452 5097544 -67056338 + L2 LINE L2 3172 3267 -5 2096 101 7 3 chr20 5098746 5099052 -67054830 + AluSp SINE Alu 7 313 0 497 317 66 49 chr20 5100746 5101112 -67052770 + L1MC4a LINE L1 5534 5905 -1903 2040 121 0 7 chr20 5101263 5101568 -67052314 + AluSx SINE Alu 1 303 -9 1897 128 3 0 chr20 5103217 5103499 -67050383 + AluSq SINE Alu 27 309 -4 694 214 132 6 chr20 5103815 5103997 -67049885 + MIR SINE MIR 21 225 -37 280 195 110 37 chr20 5104008 5104090 -67049792 - L2 LINE L2 -10 3262 3175 207 0 0 0 chr20 5105222 5105245 -67048637 + (TG)n Simple_repeat Simple_repeat 2 24 0 361 260 0 62 chr20 5105263 5105359 -67048523 - L1MC4 LINE L1 -1339 6703 6614 423 38 0 0 chr20 5105359 5105412 -67048470 + (CA)n Simple_repeat Simple_repeat 2 54 0 1730 121 72 8 chr20 5105414 5105679 -67048203 - AluJo SINE Alu -25 287 6 617 284 62 0 chr20 5105960 5106136 -67047746 - MIR SINE MIR -14 248 62 25 0 0 0 chr20 5107899 5107924 -67045958 + GC_rich Low_complexity Low_complexity 1 25 0 232 211 233 11 chr20 5108813 5108903 -67044979 - MIR3 SINE MIR -21 187 78 2205 165 6 3 chr20 5109856 5110220 -67043662 + MLT1A1 LTR MaLR 1 365 0 1859 209 88 33 chr20 5110235 5110302 -67043580 - L1ME3A LINE L1 0 6170 6108 2140 102 0 0 chr20 5110302 5110597 -67043285 - AluY SINE Alu -16 295 1 1859 209 88 33 chr20 5110597 5111075 -67042807 - L1ME3A LINE L1 -62 6108 5595 249 273 52 13 chr20 5111248 5111325 -67042557 + L2 LINE L2 3158 3237 -35 202 197 121 15 chr20 5112256 5112322 -67041560 + MIR3 SINE MIR 3 75 -133 1417 258 129 48 chr20 5112926 5113213 -67040669 - L1ME3A LINE L1 -9 6161 5899 1575 184 7 3 chr20 5113213 5113507 -67040375 - AluJo SINE Alu -17 295 1 1417 258 129 48 chr20 5113507 5113823 -67040059 - L1ME3A LINE L1 -271 5899 5509 972 202 9 37 chr20 5114017 5114235 -67039647 + Charlie4a DNA MER1_type 1 212 -296 347 137 0 0 chr20 5114236 5114287 -67039595 + MER81 DNA DNA 1 51 -63 516 209 27 0 chr20 5114289 5114399 -67039483 + MER81 DNA DNA 2 114 0 696 208 125 17 chr20 5114399 5114639 -67039243 + Charlie4a DNA MER1_type 206 471 -37 2239 97 0 0 chr20 5114659 5114959 -67038923 - AluSx SINE Alu -12 300 1 3155 71 7 0 chr20 5116044 5116455 -67037427 + L1PA8 LINE L1 5759 6172 0 2124 116 3 0 chr20 5117094 5117405 -67036477 + AluSx SINE Alu 1 312 0 1736 218 11 5 chr20 5117415 5117795 -67036087 - L1MB7 LINE L1 -5 6179 5798 1749 164 13 7 chr20 5118108 5118412 -67035470 + AluJb SINE Alu 1 306 -6 2148 155 45 18 chr20 5119612 5119992 -67033890 + MLT1B LTR MaLR 1 390 0 297 0 0 0 chr20 5120131 5120164 -67033718 + (T)n Simple_repeat Simple_repeat 1 33 0 249 183 56 56 chr20 5120401 5120472 -67033410 - MER91C DNA MER1_type -21 119 49 201 348 29 0 chr20 5120621 5120690 -67033192 + MIR SINE MIR 174 244 -18 1683 200 141 50 chr20 5120831 5121292 -67032590 - MLT2B1 LTR ERVL 0 520 18 435 258 49 63 chr20 5121302 5121445 -67032437 - L1ME4a LINE L1 -44 6077 5938 2466 31 0 0 chr20 5121445 5121733 -67032149 - AluY SINE Alu -21 290 3 435 258 49 63 chr20 5121733 5121876 -67032006 - L1ME4a LINE L1 -183 5938 5795 2059 100 0 0 chr20 5121948 5122259 -67031623 - AluSg SINE Alu 0 311 1 696 198 0 0 chr20 5122264 5122390 -67031492 - FRAM SINE Alu -18 158 33 650 290 36 23 chr20 5122920 5123218 -67030664 - MER115 DNA AcHobo -238 455 134 858 182 0 0 chr20 5123630 5123762 -67030120 + FLAM_A SINE Alu 1 132 -1 535 261 155 0 chr20 5124148 5124309 -67029573 + MER5A DNA MER1_type 4 189 0 979 180 22 11 chr20 5124581 5124764 -67029118 + MER5A DNA MER1_type 1 185 -4 2048 105 3 10 chr20 5125531 5125837 -67028045 - AluSq SINE Alu -9 304 1 2680 152 38 2 chr20 5125947 5126395 -67027487 - MER88 LTR ERVL 0 464 1 2329 145 32 54 chr20 5126672 5127045 -67026837 + Tigger2a DNA MER2_type 1 365 -2343 2139 82 7 0 chr20 5127045 5127353 -67026529 + AluSx SINE Alu 1 310 0 2329 145 32 54 chr20 5127353 5127420 -67026462 + Tigger2a DNA MER2_type 365 432 -2 24 32 0 0 chr20 5128066 5128097 -67025785 + AT_rich Low_complexity Low_complexity 1 31 0 585 196 43 43 chr20 5130759 5130922 -67022960 - L1MB8 LINE L1 0 6184 6022 971 275 210 7 chr20 5131415 5132097 -67021785 + L2 LINE L2 2476 3313 0 478 323 75 21 chr20 5132739 5133393 -67020489 + L1M4 LINE L1 4156 4844 -1302 405 313 64 38 chr20 5133474 5133675 -67020207 + L1M4 LINE L1 4942 5136 -1010 3633 104 73 0 chr20 5133675 5134212 -67019670 + L1PA13 LINE L1 5588 6163 0 405 313 64 38 chr20 5134212 5134460 -67019422 + L1M4 LINE L1 5136 5403 -743 221 196 0 0 chr20 5134940 5134986 -67018896 - L2 LINE L2 0 3313 3268 874 158 0 0 chr20 5134999 5135132 -67018750 - FLAM_C SINE Alu 0 133 1 1429 171 77 18 chr20 5135254 5135528 -67018354 - AluJo SINE Alu -14 298 9 282 270 22 45 chr20 5135584 5135673 -67018209 - L2 LINE L2 0 3272 3186 490 332 46 5 chr20 5135677 5135894 -67017988 - L2 LINE L2 -397 2917 2692 854 101 0 0 chr20 5135894 5136003 -67017879 + AluJb SINE Alu 15 123 -189 737 320 125 14 chr20 5136018 5136449 -67017433 - L2 LINE L2 -640 2674 2196 238 289 175 5 chr20 5136520 5136714 -67017168 + L1M4 LINE L1 3719 3945 -2201 311 248 115 31 chr20 5137052 5137278 -67016604 + L1M4 LINE L1 4372 4616 -1530 1247 219 4 4 chr20 5137327 5137583 -67016299 + L1 LINE L1 2581 2836 -3310 * 2822 157 9 0 chr20 5137577 5138037 -67015845 + L1 LINE L1 3640 4103 -2043 3432 143 27 13 chr20 5138038 5138658 -67015224 - L1 LINE L1 -1497 4649 4021 219 255 69 39 chr20 5138907 5139009 -67014873 - MIR SINE MIR -113 149 45 310 343 75 0 chr20 5139268 5139402 -67014480 + MER5B DNA MER1_type 5 148 -30 347 297 67 24 chr20 5140642 5140851 -67013031 - L1ME4a LINE L1 -288 5833 5616 249 286 13 13 chr20 5140943 5141020 -67012862 - MIR SINE MIR -102 160 84 231 277 9 54 chr20 5141104 5141216 -67012666 - L1ME4a LINE L1 -857 5502 5396 207 188 0 0 chr20 5142067 5142115 -67011767 + C-rich Low_complexity Low_complexity 4 51 0 27 73 0 0 chr20 5142384 5142439 -67011443 + GC_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr20 5143019 5143041 -67010841 + GC_rich Low_complexity Low_complexity 1 22 0 1823 136 0 68 chr20 5143804 5144127 -67009755 + AluJo SINE Alu 1 301 -11 1940 244 46 33 chr20 5144840 5145323 -67008559 - MLT1G LTR MaLR 0 590 96 2390 94 0 0 chr20 5145323 5145622 -67008260 + AluSx SINE Alu 2 300 -12 1940 244 46 33 chr20 5145622 5145720 -67008162 - MLT1G LTR MaLR -494 96 1 595 271 110 123 chr20 5146219 5146357 -67007525 - L2 LINE L2 -478 2836 2698 1783 185 0 3 chr20 5146357 5146654 -67007228 - AluJb SINE Alu -16 296 1 595 271 110 123 chr20 5146654 5147169 -67006713 - L2 LINE L2 -616 2698 2022 895 124 51 39 chr20 5147169 5147347 -67006535 - MER5A DNA MER1_type -6 183 4 595 271 110 123 chr20 5147347 5147645 -67006237 - L2 LINE L2 -1292 2022 1722 192 77 0 0 chr20 5148046 5148072 -67005810 + (TC)n Simple_repeat Simple_repeat 2 27 0 26 0 0 27 chr20 5148314 5148338 -67005544 + AT_rich Low_complexity Low_complexity 1 25 -11 2406 88 0 0 chr20 5148338 5148632 -67005250 + AluSx SINE Alu 1 294 -18 26 0 0 27 chr20 5148632 5148644 -67005238 + AT_rich Low_complexity Low_complexity 25 36 0 2201 107 17 0 chr20 5149347 5149636 -67004246 - AluSx SINE Alu -18 294 1 438 311 38 30 chr20 5149960 5150195 -67003687 + LTR16C LTR ERVL 97 333 -158 1126 175 14 153 chr20 5152135 5152180 -67001702 + MLT1A1 LTR MaLR 1 51 -314 2233 102 0 7 chr20 5152180 5152474 -67001408 - AluSx SINE Alu -20 292 1 1126 175 14 153 chr20 5152474 5152793 -67001089 + MLT1A1 LTR MaLR 51 314 -51 2718 128 57 0 chr20 5153078 5153499 -67000383 - MER65A LTR ERV1 0 445 1 21 36 0 0 chr20 5153653 5153681 -67000201 + AT_rich Low_complexity Low_complexity 1 28 0 257 174 58 43 chr20 5153776 5153845 -67000037 - L1ME LINE L1 -270 5851 5782 264 164 164 0 chr20 5153919 5153986 -66999896 - L1M3 LINE L1 -561 5607 5530 556 176 34 8 chr20 5155202 5155321 -66998561 - MER3 DNA MER1_type -18 191 70 1605 266 42 13 chr20 5155336 5155810 -66998072 + MER74B LTR ERVL 60 547 -75 1855 138 95 0 chr20 5155875 5156158 -66997724 + AluSg SINE Alu 1 310 0 375 154 0 0 chr20 5156174 5156239 -66997643 + GA-rich Low_complexity Low_complexity 1 65 0 678 189 8 15 chr20 5156361 5156493 -66997389 - FLAM_A SINE Alu -2 131 1 2150 104 21 10 chr20 5156882 5157171 -66996711 - AluSx SINE Alu -20 292 1 231 277 131 15 chr20 5157372 5157502 -66996380 - MER21B LTR ERV1 -11 852 708 2864 10 0 3 chr20 5157580 5157892 -66995990 - AluY SINE Alu 0 311 1 375 241 108 59 chr20 5157895 5158098 -66995784 - HAL1 LINE L1 -1536 971 759 999 278 65 39 chr20 5158116 5158547 -66995335 - HAL1 LINE L1 -1860 647 206 484 254 76 45 chr20 5158658 5158946 -66994936 + L2 LINE L2 1968 2264 -1050 323 313 30 0 chr20 5158947 5159081 -66994801 - L2 LINE L2 -287 3026 2889 526 203 177 32 chr20 5159362 5159520 -66994362 + MER5A DNA MER1_type 9 189 0 249 282 0 68 chr20 5159687 5159790 -66994092 + L3 LINE CR1 1481 1576 -1 462 280 80 19 chr20 5159871 5160179 -66993703 - L1ME LINE L1 -747 5399 5269 396 71 0 0 chr20 5160238 5160294 -66993588 + (CA)n Simple_repeat Simple_repeat 2 57 0 1740 143 35 7 chr20 5160321 5160608 -66993274 + AluSx SINE Alu 1 295 -17 599 125 118 205 chr20 5160781 5160942 -66992940 + MLT1A2 LTR MaLR 3 142 -248 2244 95 7 0 chr20 5160942 5161237 -66992645 + AluSq SINE Alu 1 297 -16 599 125 118 205 chr20 5161237 5161342 -66992540 + MLT1A2 LTR MaLR 142 255 -135 2425 81 3 0 chr20 5162068 5162377 -66991505 + AluSq SINE Alu 1 310 -3 366 208 123 39 chr20 5162407 5162537 -66991345 + L1ME4a LINE L1 5970 6110 -11 311 231 69 39 chr20 5162593 5162723 -66991159 + L1ME4a LINE L1 5932 6065 -56 335 287 55 85 chr20 5162795 5162912 -66990970 - HAL1 LINE L1 -1097 1410 1291 4377 108 21 57 chr20 5162912 5163628 -66990254 - LTR8 LTR ERV1 0 691 2 335 287 55 85 chr20 5163628 5163817 -66990065 - HAL1 LINE L1 -1216 1291 1113 705 144 0 0 chr20 5164228 5164332 -66989550 - AluSx SINE Alu -22 288 185 252 146 91 0 chr20 5164348 5164403 -66989479 + LTR1B LTR ERV1 43 102 -724 491 242 121 18 chr20 5164413 5164578 -66989304 + LTR1 LTR ERV1 36 217 -568 661 222 146 77 chr20 5164673 5164907 -66988975 + LTR28 LTR ERV1 343 589 -237 1405 124 0 0 chr20 5164974 5165159 -66988723 - AluSx SINE Alu -123 189 5 4657 114 12 0 chr20 5165210 5165882 -66988000 + L1PB4 LINE L1 5463 6282 -21 608 151 0 0 chr20 5166298 5166391 -66987491 + AluJ/FLAM SINE Alu 2 94 -218 1331 92 11 0 chr20 5166391 5166575 -66987307 - MER30 DNA MER1_type -44 186 1 1303 201 16 33 chr20 5166601 5166904 -66986978 - L1MB7 LINE L1 -1 6183 5886 4548 103 37 83 chr20 5166904 5167319 -66986563 + MER4E LTR ERV1 1 434 -345 2197 48 58 55 chr20 5167319 5167628 -66986254 + AluY SINE Alu 1 310 -1 4548 103 37 83 chr20 5167628 5167756 -66986126 + MER4E LTR ERV1 434 566 -213 2397 137 36 5 chr20 5167756 5168142 -66985740 - MER48 LTR ERV1 0 398 1 4548 103 37 83 chr20 5168142 5168414 -66985468 + MER4E LTR ERV1 566 779 0 3249 186 24 16 chr20 5168414 5168475 -66985407 - L1MB7 LINE L1 -289 5889 5830 1872 157 7 0 chr20 5168475 5168768 -66985114 - AluJb SINE Alu -17 295 1 3249 186 24 16 chr20 5168768 5169146 -66984736 - L1MB7 LINE L1 -348 5830 5456 1434 158 114 70 chr20 5169146 5169575 -66984307 - LTR7 LTR ERV1 -2 448 1 3249 186 24 16 chr20 5169575 5170235 -66983647 - L1MB7 LINE L1 -722 5456 4781 1865 208 123 64 chr20 5170245 5170759 -66983123 - L1MCa LINE L1 -3953 2611 2172 254 33 0 0 chr20 5170759 5170789 -66983093 - MSTC LTR MaLR -75 353 324 1865 208 123 64 chr20 5170789 5171172 -66982710 - L1MCa LINE L1 -4392 2172 1813 1289 297 11 23 chr20 5171162 5171633 -66982249 - L1MCa LINE L1 -5576 469 5 * 383 198 222 12 chr20 5171845 5172012 -66981870 - L2 LINE L2 -2176 1138 937 1007 215 20 28 chr20 5172862 5173113 -66980769 - MSTD LTR MaLR 0 396 148 1807 32 28 0 chr20 5173131 5173347 -66980535 + L1PA5 LINE L1 5928 6149 -5 613 86 39 0 chr20 5173347 5173475 -66980407 + (TA)n Simple_repeat Simple_repeat 2 134 0 387 0 0 0 chr20 5173475 5173518 -66980364 + (CA)n Simple_repeat Simple_repeat 2 44 0 693 164 8 22 chr20 5173528 5173662 -66980220 - MSTD LTR MaLR -264 132 1 2292 98 7 10 chr20 5173890 5174196 -66979686 + AluSx SINE Alu 6 310 -2 586 234 30 14 chr20 5174586 5174751 -66979131 - MER77 LTR ERV1 -7 598 426 763 127 17 17 chr20 5174761 5174879 -66979003 + FRAM SINE Alu 21 138 -38 813 276 91 111 chr20 5174919 5175298 -66978584 - MER77 LTR ERV1 -117 488 81 5854 127 14 29 chr20 5175749 5176888 -66976994 + L1PB3 LINE L1 5031 6154 0 1306 213 281 19 chr20 5177358 5177781 -66976101 + MLT1F LTR MaLR 9 542 0 225 331 12 41 chr20 5177843 5178015 -66975867 - L2 LINE L2 -1626 1688 1522 1896 137 14 0 chr20 5178288 5178590 -66975292 + AluJb SINE Alu 1 306 0 880 191 0 0 chr20 5178680 5178837 -66975045 - MER3 DNA MER1_type -52 157 1 400 249 127 71 chr20 5179023 5179488 -66974394 + L1M4 LINE L1 3782 4273 -1873 1825 228 94 4 chr20 5179534 5180021 -66973861 + MER90 LTR ERV1 84 614 0 1977 152 30 0 chr20 5180046 5180343 -66973539 + AluJo SINE Alu 1 306 -6 1210 83 12 0 chr20 5180558 5180727 -66973155 - L1MB1 LINE L1 0 6168 5998 1319 97 0 43 chr20 5180727 5180913 -66972969 - AluSq SINE Alu -135 178 1 2977 123 65 45 chr20 5180915 5181467 -66972415 - L1MB1 LINE L1 -361 5828 5266 1431 196 0 4 chr20 5181475 5181705 -66972177 + MER8 DNA MER2_type 11 239 0 4834 198 47 15 chr20 5181705 5182732 -66971150 - L1MB1 LINE L1 -878 5268 4201 2077 143 0 0 chr20 5182732 5183026 -66970856 + AluSx SINE Alu 2 295 -17 4834 198 47 15 chr20 5183026 5183097 -66970785 - L1MB1 LINE L1 -1945 4201 4134 233 209 23 0 chr20 5183099 5183142 -66970740 - MER47B DNA MER2_type -374 44 1 531 158 0 0 chr20 5183157 5183239 -66970643 + MER47B DNA MER2_type 336 417 -1 658 138 0 0 chr20 5183264 5183358 -66970524 - Tigger1 DNA MER2_type -586 1832 1739 1096 156 0 0 chr20 5183358 5183525 -66970357 - AluSc SINE Alu -2 307 141 7097 151 17 12 chr20 5183531 5184678 -66969204 + THE1B-int LTR MaLR 427 1579 -1 742 80 143 2 chr20 5184680 5184792 -66969090 + THE1B LTR MaLR 3 121 -247 1602 88 4 18 chr20 5184792 5185018 -66968864 + MSTA-int LTR MaLR 1358 1580 0 2362 126 59 45 chr20 5185018 5185440 -66968442 + MSTA LTR MaLR 1 428 0 9282 123 6 4 chr20 5185442 5187121 -66966761 - Tigger1 DNA MER2_type -749 1669 1 1313 268 48 21 chr20 5187122 5187733 -66966149 - L1M3de LINE L1 -4982 909 4 1898 190 58 85 chr20 5188123 5188292 -66965590 + MER92B LTR ERV1 1 173 -463 2046 139 39 18 chr20 5188292 5188622 -66965260 - MER1B DNA MER1_type 0 337 1 1898 190 58 85 chr20 5188622 5188879 -66965003 + MER92B LTR ERV1 173 409 -227 2265 116 0 19 chr20 5188879 5189197 -66964685 - AluSx SINE Alu 0 312 1 1898 190 58 85 chr20 5189197 5189369 -66964513 + MER92B LTR ERV1 409 584 -52 1333 195 0 0 chr20 5189369 5189584 -66964298 - AluJo SINE Alu -14 298 84 834 207 0 0 chr20 5189863 5190008 -66963874 + FRAM SINE Alu 2 146 -30 1993 156 17 0 chr20 5190012 5190307 -66963575 - AluSx SINE Alu -10 302 3 1991 126 0 0 chr20 5191204 5191473 -66962409 + AluSx SINE Alu 1 269 -43 232 214 36 0 chr20 5192400 5192456 -66961426 + CT-rich Low_complexity Low_complexity 1 58 0 248 233 14 0 chr20 5192672 5192745 -66961137 + CT-rich Low_complexity Low_complexity 3 76 0 1676 176 10 30 chr20 5192768 5193069 -66960813 - AluJo SINE Alu -13 299 5 511 206 198 71 chr20 5193074 5193438 -66960444 - LTR16A1 LTR ERVL -37 420 11 863 294 202 29 chr20 5193517 5194982 -66958900 - L2 LINE L2 -4 3309 1565 2558 134 20 0 chr20 5195090 5195486 -66958396 + LTR26 LTR ERV1 1 404 -199 2680 154 11 50 chr20 5195562 5196107 -66957775 - LTR26B LTR ERV1 -7 524 1 2058 116 3 42 chr20 5196119 5196454 -66957428 - THE1C LTR MaLR -53 322 1 7812 114 10 5 chr20 5196454 5197685 -66956197 - THE1C-int LTR MaLR 0 1580 312 551 241 68 0 chr20 5198753 5198915 -66954967 - L1M4 LINE L1 -3379 2767 2595 1239 135 0 36 chr20 5198915 5199108 -66954774 - AluJo SINE Alu -7 305 120 520 205 49 0 chr20 5199710 5199832 -66954050 + MER94 DNA DNA 1 128 -6 207 204 0 0 chr20 5200553 5200602 -66953280 + CT-rich Low_complexity Low_complexity 1 49 0 1423 169 37 36 chr20 5200775 5200801 -66953081 - MLT2D LTR ERVL 0 414 390 402 21 0 0 chr20 5200801 5200848 -66953034 + (TG)n Simple_repeat Simple_repeat 2 48 0 1423 169 37 36 chr20 5200848 5201170 -66952712 - MLT2D LTR ERVL -24 390 1 296 272 52 44 chr20 5201293 5201429 -66952453 - MIR3 SINE MIR -65 143 7 2266 107 0 13 chr20 5202323 5202633 -66951249 + AluSg SINE Alu 1 306 -4 240 86 0 0 chr20 5206231 5206266 -66947616 + (A)n Simple_repeat Simple_repeat 1 35 0 205 232 11 105 chr20 5206273 5206368 -66947514 - MIR SINE MIR 0 262 177 397 188 0 38 chr20 5206369 5206449 -66947433 + MER116 DNA Mariner 2 78 -2 1901 121 0 93 chr20 5206666 5207013 -66946869 + AluSx SINE Alu 1 318 0 619 228 91 10 chr20 5207333 5207530 -66946352 + LTR33 LTR ERVL 308 520 -1 1917 104 93 11 chr20 5208441 5208720 -66945162 + AluSx SINE Alu 2 303 -9 383 286 29 100 chr20 5208785 5209134 -66944748 + MLT1I LTR MaLR 71 394 -15 2233 130 14 9 chr20 5210092 5210437 -66943445 - MER7A DNA MER2_type 0 346 2 671 281 130 4 chr20 5210444 5210675 -66943207 - MIR SINE MIR -1 261 2 791 199 37 0 chr20 5210921 5211082 -66942800 - MER5A DNA MER1_type -3 186 20 22 35 0 0 chr20 5212349 5212378 -66941504 + AT_rich Low_complexity Low_complexity 1 29 0 972 222 94 0 chr20 5212431 5212634 -66941248 + MIR SINE MIR 17 238 -24 722 129 11 0 chr20 5212665 5212794 -66941088 + L1MB3 LINE L1 5825 5957 -211 1385 140 4 25 chr20 5212842 5213085 -66940797 + L1MB3 LINE L1 5944 6181 -2 723 283 88 23 chr20 5213259 5213602 -66940280 + L1MC4a LINE L1 5578 5942 -1866 1609 160 42 11 chr20 5213609 5213872 -66940010 + AluSx SINE Alu 3 273 -39 402 74 0 0 chr20 5213873 5213927 -66939955 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 941 148 7 0 chr20 5215276 5215418 -66938464 - FLAM_C SINE Alu 0 143 1 270 218 39 13 chr20 5215717 5215782 -66938100 + (TATAG)n Simple_repeat Simple_repeat 5 74 -10 1725 151 0 96 chr20 5215782 5215935 -66937947 + AluJo SINE Alu 2 107 -195 1764 119 12 4 chr20 5215935 5216188 -66937694 + AluSq SINE Alu 11 265 -48 1725 151 0 96 chr20 5216188 5216366 -66937516 + AluJo SINE Alu 107 301 -1 270 218 39 13 chr20 5216366 5216378 -66937504 + (TATAG)n Simple_repeat Simple_repeat 74 84 0 2072 124 0 3 chr20 5220181 5220495 -66933387 + AluSx SINE Alu 1 313 0 439 225 137 85 chr20 5220501 5220794 -66933088 + L1ME3A LINE L1 5742 6049 -121 2216 130 0 0 chr20 5221468 5221775 -66932107 + AluSx SINE Alu 1 307 -5 1361 174 170 0 chr20 5221985 5222296 -66931586 - MLT1A1 LTR MaLR 0 365 2 341 202 45 11 chr20 5223248 5223337 -66930545 - L1MC4 LINE L1 -1337 6705 6614 781 146 47 113 chr20 5223339 5223369 -66930513 - MER20 DNA MER1_type 0 219 189 2169 109 0 3 chr20 5223369 5223677 -66930205 - AluSq SINE Alu 0 308 2 781 146 47 113 chr20 5223677 5223704 -66930178 - MER20 DNA MER1_type -30 189 162 908 176 0 24 chr20 5223704 5223874 -66930008 - FRAM SINE Alu 0 166 1 781 146 47 113 chr20 5223874 5224026 -66929856 - MER20 DNA MER1_type -57 162 22 2381 131 53 51 chr20 5224027 5224494 -66929388 + L1MB3 LINE L1 5708 6175 -8 313 232 0 0 chr20 5224494 5224550 -66929332 + L1MC4 LINE L1 6648 6703 -1339 1975 155 0 7 chr20 5224553 5224849 -66929033 - AluJb SINE Alu -18 294 1 1031 181 13 44 chr20 5224929 5225110 -66928772 + MLT1D LTR MaLR 267 452 -53 1792 190 0 10 chr20 5225110 5225415 -66928467 + AluJo SINE Alu 1 302 -10 1888 147 9 34 chr20 5225415 5225735 -66928147 + AluJb SINE Alu 1 312 0 1031 181 13 44 chr20 5225735 5225778 -66928104 + MLT1D LTR MaLR 450 485 -20 28 0 0 0 chr20 5225864 5225892 -66927990 + AT_rich Low_complexity Low_complexity 1 28 0 2128 94 56 3 chr20 5225988 5226276 -66927606 - AluSx SINE Alu -9 303 1 343 316 165 14 chr20 5226361 5226646 -66927236 - L2 LINE L2 0 3272 2945 1748 213 48 21 chr20 5226743 5227227 -66926655 + MLT1D LTR MaLR 1 497 -8 194 275 73 73 chr20 5227242 5227351 -66926531 - L2 LINE L2 -583 2731 2623 181 340 107 14 chr20 5227750 5227965 -66925917 - L2 LINE L2 -1241 2073 1839 1712 157 27 27 chr20 5228090 5228383 -66925499 - AluJo SINE Alu -19 293 1 423 263 52 66 chr20 5228913 5229202 -66924680 + L1 LINE L1 5118 5402 -744 190 273 30 30 chr20 5229288 5229387 -66924495 + L2 LINE L2 2168 2266 -1048 1981 153 7 0 chr20 5230125 5230413 -66923469 - AluJo SINE Alu -12 300 11 1043 199 178 23 chr20 5231301 5231694 -66922188 - LTR16A1 LTR ERVL -3 454 1 1418 188 59 26 chr20 5232721 5232993 -66920889 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr20 5232993 5233013 -66920869 + (CAAAT)n Simple_repeat Simple_repeat 2 21 0 520 258 17 0 chr20 5233013 5233133 -66920749 + MER5B DNA MER1_type 57 178 0 622 241 21 7 chr20 5233911 5234056 -66919826 - MIR SINE MIR -69 193 47 817 185 12 19 chr20 5234164 5234326 -66919556 - MER5A DNA MER1_type -1 188 28 327 266 142 0 chr20 5234334 5234447 -66919435 - MIR SINE MIR -54 208 80 235 225 27 0 chr20 5235362 5235519 -66918363 + (TG)n Simple_repeat Simple_repeat 1 190 0 22 56 0 0 chr20 5237622 5237658 -66916224 + AT_rich Low_complexity Low_complexity 1 36 0 1854 154 3 17 chr20 5237670 5237962 -66915920 + AluJo SINE Alu 13 300 -12 1648 155 0 7 chr20 5237992 5238283 -66915599 + L1MB4 LINE L1 5890 6178 -2 547 297 104 55 chr20 5238302 5238470 -66915412 - L1ME4a LINE L1 -61 6060 5902 2279 82 0 4 chr20 5238470 5238749 -66915133 + AluSq SINE Alu 11 288 -25 547 297 104 55 chr20 5238749 5239001 -66914881 - L1ME4a LINE L1 -219 5902 5619 231 118 0 0 chr20 5239124 5239158 -66914724 - MER63 DNA MER1_type -402 34 1 232 279 88 0 chr20 5239525 5239593 -66914289 - MIR3 SINE MIR -23 185 112 2334 113 0 0 chr20 5239623 5239916 -66913966 + AluSx SINE Alu 1 293 -19 788 217 38 71 chr20 5240110 5240322 -66913560 - MER63A DNA MER1_type -5 205 1 403 200 131 39 chr20 5240484 5240589 -66913293 - MIR SINE MIR -24 238 117 2493 96 0 0 chr20 5240589 5240901 -66912981 - AluSq SINE Alu -1 312 1 403 200 131 39 chr20 5240901 5240925 -66912957 - MIR SINE MIR -145 117 97 675 269 133 37 chr20 5240944 5241215 -66912667 - LTR16C LTR ERVL 0 491 195 1905 153 6 31 chr20 5241861 5242181 -66911701 + AluJo SINE Alu 1 312 0 21 71 0 0 chr20 5244716 5244758 -66909124 + GC_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr20 5244925 5244949 -66908933 + GC_rich Low_complexity Low_complexity 1 24 0 307 344 0 39 chr20 5245139 5245319 -66908563 + C-rich Low_complexity Low_complexity 4 176 0 2127 140 3 13 chr20 5246722 5247037 -66906845 - AluJo SINE Alu 0 312 1 2134 122 14 3 chr20 5247287 5247583 -66906299 - AluSq SINE Alu -14 299 1 1077 91 0 0 chr20 5247705 5247837 -66906045 + AluSq/x SINE Alu 1 132 -181 1867 167 15 13 chr20 5247837 5248232 -66905650 - Charlie5 DNA MER1_type -3 2609 2214 420 142 82 97 chr20 5248218 5248266 -66905616 - MER3 DNA MER1_type -40 122 122 * 2674 49 0 0 chr20 5248266 5248570 -66905312 + AluY SINE Alu 1 304 -7 420 142 82 97 chr20 5248570 5248655 -66905227 - MER3 DNA MER1_type -39 123 38 2263 98 14 0 chr20 5249011 5249333 -66904549 + AluSq SINE Alu 1 313 0 769 296 98 15 chr20 5249558 5249832 -66904050 - LTR16C LTR ERVL 0 491 195 2326 89 16 22 chr20 5249909 5250222 -66903660 + AluSx SINE Alu 1 311 -1 2035 228 61 23 chr20 5251305 5251832 -66902050 + MLT1H LTR MaLR 1 547 -2 252 86 0 0 chr20 5252394 5252429 -66901453 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 331 229 0 76 chr20 5252721 5252826 -66901056 + L1MC4 LINE L1 6611 6707 -1335 1891 149 30 7 chr20 5253079 5253380 -66900502 + AluJb SINE Alu 1 308 -4 306 316 89 59 chr20 5253382 5253740 -66900142 + HAL1 LINE L1 895 1263 -1244 290 261 43 87 chr20 5253846 5253961 -66899921 + L2 LINE L2 3195 3304 -9 231 65 0 0 chr20 5254071 5254102 -66899780 - L1P4 LINE L1 -436 5732 5702 848 160 0 0 chr20 5254103 5254228 -66899654 + FLAM_C SINE Alu 1 125 -18 2171 92 112 9 chr20 5254254 5254601 -66899281 + L1PA15 LINE L1 5777 6159 -6 306 297 14 14 chr20 5254829 5254967 -66898915 + HAL1b LINE L1 670 807 -541 1362 197 0 28 chr20 5255512 5255766 -66898116 + AluJo SINE Alu 44 290 -22 288 0 0 0 chr20 5256487 5256519 -66897363 + (TA)n Simple_repeat Simple_repeat 2 33 0 2486 84 0 0 chr20 5256527 5256837 -66897045 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 5256837 5256858 -66897024 + AT_rich Low_complexity Low_complexity 1 21 0 280 288 76 0 chr20 5257007 5257125 -66896757 - L2 LINE L2 -338 2976 2850 183 333 90 9 chr20 5257864 5257975 -66895907 - L2 LINE L2 -446 2868 2749 360 240 20 10 chr20 5257978 5258078 -66895804 - MLT2E LTR ERVL -50 578 478 765 284 171 19 chr20 5258092 5258292 -66895590 - MLT2F LTR ERVL -103 560 392 1833 144 13 33 chr20 5258292 5258598 -66895284 + AluJo SINE Alu 1 300 -12 765 284 171 19 chr20 5258598 5258883 -66894999 - MLT2F LTR ERVL -271 392 1 276 423 16 0 chr20 5259180 5259362 -66894520 - L2 LINE L2 -558 2756 2572 2201 100 3 17 chr20 5359439 5359740 -66794142 - AluSc SINE Alu -11 298 2 2222 96 3 3 chr20 5359748 5360040 -66793842 - AluSx SINE Alu -20 292 1 2443 85 0 0 chr20 5360281 5360587 -66793295 + AluY SINE Alu 1 306 -5 2263 118 0 0 chr20 5360753 5361059 -66792823 + AluSx SINE Alu 1 306 -6 2359 88 7 0 chr20 5361348 5361645 -66792237 + AluSx SINE Alu 1 299 -13 2386 78 16 3 chr20 5361937 5362246 -66791636 - AluSp SINE Alu 0 313 1 2087 111 13 13 chr20 5363551 5363858 -66790024 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr20 5364535 5364558 -66789324 + AT_rich Low_complexity Low_complexity 1 23 0 1727 154 45 17 chr20 5364630 5364922 -66788960 - AluJb SINE Alu -12 300 1 1619 165 74 3 chr20 5364931 5365100 -66788782 - AluJb SINE Alu -7 305 106 279 0 0 0 chr20 5365100 5365131 -66788751 + (TG)n Simple_repeat Simple_repeat 2 32 0 1619 165 74 3 chr20 5365131 5365246 -66788636 - AluJb SINE Alu -206 106 1 1767 189 0 13 chr20 5365667 5365980 -66787902 - AluJb SINE Alu -3 309 1 277 224 0 0 chr20 5366476 5366534 -66787348 - L1MC/D LINE L1 -2055 5753 5696 1137 162 0 0 chr20 5366683 5366850 -66787032 + FRAM SINE Alu 2 168 -8 2250 118 0 6 chr20 5367042 5367357 -66786525 + AluSp SINE Alu 1 313 0 2221 109 0 13 chr20 5367410 5367714 -66786168 + AluSg SINE Alu 1 300 -10 333 0 0 0 chr20 5369577 5369614 -66784268 + (TG)n Simple_repeat Simple_repeat 2 38 0 1159 190 90 13 chr20 5369722 5370022 -66783860 - MER33 DNA MER1_type -1 323 1 1550 189 27 30 chr20 5370340 5370440 -66783442 - AluJo SINE Alu -17 295 196 2212 117 0 0 chr20 5370440 5370739 -66783143 - AluSx SINE Alu -13 299 1 1550 189 27 30 chr20 5370739 5370934 -66782948 - AluJo SINE Alu -116 196 1 349 205 256 0 chr20 5371397 5371514 -66782368 - L1ME4a LINE L1 -11 6110 5964 228 133 67 0 chr20 5371515 5371560 -66782322 + CT-rich Low_complexity Low_complexity 3 50 0 1116 134 34 6 chr20 5371561 5371740 -66782142 - AluJb SINE Alu 0 312 129 426 298 30 38 chr20 5371864 5372129 -66781753 - L1ME4a LINE L1 -303 5818 5556 1632 151 50 4 chr20 5372131 5372389 -66781493 + AluJo SINE Alu 3 272 -40 1517 107 0 47 chr20 5372489 5372723 -66781159 + AluSg/x SINE Alu 83 305 -5 798 164 0 0 chr20 5372723 5372839 -66781043 - AluJo/FLAM SINE Alu -186 116 1 383 143 57 0 chr20 5372977 5373047 -66780835 + FLAM_A SINE Alu 60 133 0 2327 92 0 3 chr20 5374026 5374320 -66779562 + AluSg SINE Alu 14 306 -4 815 153 8 0 chr20 5374424 5374548 -66779334 + FLAM_C SINE Alu 1 125 -18 22 35 0 0 chr20 5374555 5374584 -66779298 + AT_rich Low_complexity Low_complexity 1 29 0 323 265 108 34 chr20 5374918 5375122 -66778760 + L1ME4a LINE L1 5268 5486 -692 542 230 155 24 chr20 5375227 5375518 -66778364 + L1ME4a LINE L1 5635 5963 -158 2206 110 7 7 chr20 5375523 5375832 -66778050 - AluSx SINE Alu -3 309 1 443 252 132 13 chr20 5376423 5376582 -66777300 + MER5B DNA MER1_type 1 178 0 189 0 0 0 chr20 5376663 5376684 -66777198 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 2062 152 0 0 chr20 5376691 5377001 -66776881 - AluY SINE Alu -1 310 1 2344 87 0 0 chr20 5377003 5377291 -66776591 - AluSg SINE Alu -20 290 3 2761 175 46 72 chr20 5377427 5377824 -66776058 + L1MB7 LINE L1 4553 4959 -1194 2424 88 3 0 chr20 5377824 5378120 -66775762 + AluSp SINE Alu 1 297 -16 2761 175 46 72 chr20 5378120 5378365 -66775517 + L1MB7 LINE L1 4959 5209 -944 2441 76 3 0 chr20 5378365 5378666 -66775216 + AluY SINE Alu 1 302 -9 2761 175 46 72 chr20 5378666 5378677 -66775205 + L1MB7 LINE L1 5209 5219 -934 2386 75 14 0 chr20 5378677 5378971 -66774911 + AluSp SINE Alu 1 298 -15 2761 175 46 72 chr20 5378971 5379129 -66774753 + L1MB7 LINE L1 5219 5340 -813 694 175 58 7 chr20 5379135 5379272 -66774610 + FAM SINE Alu 14 157 -28 2488 68 3 0 chr20 5379272 5379567 -66774315 + AluY SINE Alu 1 296 -15 3342 164 122 37 chr20 5379589 5379856 -66774026 + L1MB7 LINE L1 5317 5560 -624 2081 134 0 3 chr20 5379856 5380155 -66773727 + AluSc SINE Alu 1 298 -11 3342 164 122 37 chr20 5380155 5380450 -66773432 + L1MB7 LINE L1 5560 5829 -355 2218 121 0 0 chr20 5380450 5380748 -66773134 - AluSx SINE Alu -14 298 1 3342 164 122 37 chr20 5380748 5380972 -66772910 + L1MB7 LINE L1 5829 6171 -13 681 159 48 8 chr20 5381186 5381312 -66772570 + FLAM_C SINE Alu 1 131 -2 2038 123 0 0 chr20 5381346 5381614 -66772268 - AluSq SINE Alu -45 268 1 432 55 0 0 chr20 5381634 5381689 -66772193 + (CA)n Simple_repeat Simple_repeat 2 56 0 2523 52 7 0 chr20 5382565 5382856 -66771026 + AluY SINE Alu 1 293 -18 2178 118 0 10 chr20 5383015 5383312 -66770570 + AluSq SINE Alu 1 294 -19 1877 113 21 25 chr20 5383318 5383454 -66770428 + AluSq SINE Alu 1 136 -177 2252 129 0 0 chr20 5383454 5383763 -66770119 + AluSc SINE Alu 1 309 0 1877 113 21 25 chr20 5383763 5383908 -66769974 + AluSq SINE Alu 136 281 -32 2367 85 7 13 chr20 5383954 5384260 -66769622 + AluSg SINE Alu 1 304 -6 1408 126 0 9 chr20 5384313 5384527 -66769355 - MER46B DNA MER2_type 0 236 25 821 231 19 0 chr20 5384529 5384685 -66769197 + FRAM SINE Alu 1 159 -17 650 134 228 0 chr20 5384685 5384812 -66769070 - MER46B DNA MER2_type -201 35 5 268 237 183 15 chr20 5384905 5385036 -66768846 + MLT1J1 LTR MaLR 33 185 -261 260 269 0 0 chr20 5385086 5385138 -66768744 + MLT1J2 LTR MaLR 280 331 -119 661 198 9 0 chr20 5385238 5385354 -66768528 + FLAM_C SINE Alu 2 118 -25 2008 135 3 10 chr20 5385359 5385671 -66768211 - AluSx SINE Alu -2 310 1 1807 120 48 10 chr20 5385699 5385991 -66767891 + AluSq SINE Alu 1 303 -10 1358 205 7 17 chr20 5386110 5386398 -66767484 - AluJo SINE Alu -16 296 12 2192 111 0 0 chr20 5386441 5386720 -66767162 + AluSg SINE Alu 1 279 -31 396 0 0 0 chr20 5386720 5386764 -66767118 + (CA)n Simple_repeat Simple_repeat 1 44 0 242 263 0 25 chr20 5386817 5386897 -66766985 + L1M4 LINE L1 4519 4596 -1550 1666 80 0 0 chr20 5386912 5387111 -66766771 + AluSg/x SINE Alu 86 284 -28 2380 88 3 7 chr20 5387503 5387809 -66766073 - AluSp SINE Alu -8 305 1 1033 154 0 154 chr20 5387883 5387996 -66765886 + MER46A DNA MER2_type 1 47 -2684 2193 75 0 91 chr20 5387996 5388327 -66765555 + AluY SINE Alu 1 301 -10 1033 154 0 154 chr20 5388327 5388492 -66765390 + MER46A DNA MER2_type 47 236 0 1491 127 79 89 chr20 5388799 5389090 -66764792 + AluJb SINE Alu 1 288 -24 251 94 0 0 chr20 5389153 5389185 -66764697 - MER58A DNA MER1_type -3 221 190 283 208 0 0 chr20 5389200 5389253 -66764629 - MER58A DNA MER1_type -15 92 40 * 440 236 0 0 chr20 5389252 5389341 -66764541 + MER5A DNA MER1_type 17 105 -84 1984 113 78 0 chr20 5389502 5389785 -66764097 + AluSg SINE Alu 1 305 -5 1271 128 6 0 chr20 5389785 5389964 -66763918 + AluSq SINE Alu 134 313 0 324 357 40 20 chr20 5390686 5390885 -66762997 + MIR SINE MIR 27 229 -33 2399 110 0 0 chr20 5391405 5391715 -66762167 + AluSg SINE Alu 1 310 0 718 243 283 28 chr20 5391878 5392477 -66761405 + L2 LINE L2 2231 2676 -637 1262 201 67 62 chr20 5392477 5392634 -66761248 + MLT1B LTR MaLR 1 156 -234 1471 161 113 0 chr20 5392634 5392792 -66761090 - AluJb SINE Alu -20 292 95 216 0 0 0 chr20 5392792 5392816 -66761066 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1471 161 113 0 chr20 5392816 5392905 -66760977 - AluJb SINE Alu -217 95 17 1262 201 67 62 chr20 5392905 5393135 -66760747 + MLT1B LTR MaLR 156 390 0 718 243 283 28 chr20 5393135 5393348 -66760534 + L2 LINE L2 2676 3312 -1 2290 104 7 0 chr20 5393805 5394104 -66759778 - AluSx SINE Alu -11 301 1 942 140 0 7 chr20 5394556 5394692 -66759190 - FLAM_C SINE Alu -8 135 1 227 286 66 22 chr20 5395352 5395443 -66758439 - MIR SINE MIR -92 116 22 24 0 0 0 chr20 5396141 5396165 -66757717 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 5396199 5396234 -66757648 + GC_rich Low_complexity Low_complexity 1 35 0 32 111 0 0 chr20 5396255 5396399 -66757483 + GC_rich Low_complexity Low_complexity 1 144 0 24 32 0 0 chr20 5396507 5396538 -66757344 + GC_rich Low_complexity Low_complexity 1 31 0 218 186 0 86 chr20 5396551 5396621 -66757261 + C-rich Low_complexity Low_complexity 1 64 0 340 211 0 0 chr20 5397069 5397137 -66756745 - MER5A DNA MER1_type -81 101 32 406 259 41 41 chr20 5397188 5397358 -66756524 + MER5A DNA MER1_type 18 187 -2 * 904 178 0 6 chr20 5397211 5397374 -66756508 - MER5A DNA MER1_type -27 162 1 864 220 23 0 chr20 5397721 5397894 -66755988 - AluJb SINE Alu -2 310 134 507 131 0 24 chr20 5397905 5397989 -66755893 + MER4A LTR ERV1 583 664 0 2505 21 0 3 chr20 5398101 5398423 -66755459 + AluY SINE Alu 1 321 0 755 168 23 15 chr20 5399563 5399694 -66754188 + FLAM_C SINE Alu 1 132 -1 2427 57 7 0 chr20 5399717 5400069 -66753813 + AluSp SINE Alu 1 354 0 1368 118 3 132 chr20 5400599 5400705 -66753177 - MER58D DNA MER1_type -2042 378 260 2428 72 7 0 chr20 5400705 5400996 -66752886 + AluSq SINE Alu 1 293 -20 1368 118 3 132 chr20 5400996 5401087 -66752795 - MER58D DNA MER1_type -2160 260 243 2219 113 0 7 chr20 5401087 5401397 -66752485 - AluSg SINE Alu -2 308 1 1368 118 3 132 chr20 5401397 5401547 -66752335 - MER58D DNA MER1_type -2177 243 75 1776 124 97 0 chr20 5401547 5401840 -66752042 - AluSx SINE Alu 0 318 1 279 79 0 0 chr20 5401948 5401986 -66751896 + (TG)n Simple_repeat Simple_repeat 2 39 0 298 204 0 117 chr20 5401987 5402090 -66751792 + L1ME3A LINE L1 5688 5778 -2030 1413 151 34 50 chr20 5402200 5402244 -66751638 - L1MB8 LINE L1 -13 6167 6124 1976 174 0 0 chr20 5402244 5402555 -66751327 + AluSx SINE Alu 1 311 -1 1413 151 34 50 chr20 5402555 5402836 -66751046 - L1MB8 LINE L1 -56 6124 5851 276 155 0 13 chr20 5402842 5402870 -66751012 + Alu SINE Alu 247 247 -55 417 97 0 108 chr20 5402870 5402909 -66750973 - L1MB4 LINE L1 0 6180 6155 2429 91 0 0 chr20 5402909 5403205 -66750677 - AluSq SINE Alu -17 296 1 417 97 0 108 chr20 5403205 5403258 -66750624 - L1MB4 LINE L1 -25 6155 6098 276 155 0 13 chr20 5403258 5403294 -66750588 + Alu SINE Alu 247 282 -20 875 104 64 0 chr20 5403737 5403862 -66750020 - FLAM_C SINE Alu 0 133 1 363 358 64 9 chr20 5403913 5404243 -66749639 + L2 LINE L2 1758 2105 -1209 290 306 65 9 chr20 5404490 5404598 -66749284 + L2 LINE L2 3136 3249 -23 2476 156 105 49 chr20 5404740 5404809 -66749073 - MLT2B2 LTR ERVL 0 515 451 2651 43 0 0 chr20 5404809 5405109 -66748773 + AluY SINE Alu 1 300 -11 2476 156 105 49 chr20 5405109 5405525 -66748357 - MLT2B2 LTR ERVL -64 451 3 1472 190 11 7 chr20 5405603 5405736 -66748146 + AluJb SINE Alu 1 132 -180 2082 116 24 0 chr20 5405736 5406030 -66747852 + AluSq SINE Alu 1 301 -12 1472 190 11 7 chr20 5406030 5406175 -66747707 + AluJb SINE Alu 132 280 -32 858 126 0 0 chr20 5406180 5406315 -66747567 + (GGAA)n Simple_repeat Simple_repeat 4 138 0 207 0 0 0 chr20 5406504 5406527 -66747355 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 579 265 85 5 chr20 5406532 5406732 -66747150 + L1ME3A LINE L1 5935 6150 -20 2243 92 0 41 chr20 5406737 5407052 -66746830 - AluSq SINE Alu -9 304 3 391 279 19 51 chr20 5407285 5407443 -66746439 + MIR SINE MIR 60 212 -50 219 320 0 40 chr20 5407681 5407756 -66746126 - L2 LINE L2 -13 3259 3188 2321 108 3 6 chr20 5407765 5408079 -66745803 + AluSp SINE Alu 1 313 0 2355 101 0 0 chr20 5408085 5408382 -66745500 + AluSx SINE Alu 1 297 -15 370 150 17 0 chr20 5408912 5408972 -66744910 - AluJ/FLAM SINE Alu -241 61 1 610 280 134 18 chr20 5409124 5409419 -66744463 - L2 LINE L2 -246 3067 2727 1055 183 10 5 chr20 5409419 5409616 -66744266 - AluJo SINE Alu -11 301 104 236 158 0 92 chr20 5409636 5409674 -66744208 + A-rich Low_complexity Low_complexity 2 31 -39 2414 98 0 0 chr20 5409674 5409979 -66743903 + AluSc SINE Alu 1 305 -4 236 158 0 92 chr20 5409979 5410016 -66743866 + A-rich Low_complexity Low_complexity 31 70 0 722 118 0 96 chr20 5410026 5410162 -66743720 - FLAM_C SINE Alu -10 133 11 862 288 87 78 chr20 5410165 5410342 -66743540 - L2 LINE L2 -593 2721 2547 2458 68 3 10 chr20 5410342 5410649 -66743233 - AluY SINE Alu -6 305 1 2459 90 3 0 chr20 5410654 5410965 -66742917 - AluSx SINE Alu 0 312 1 862 288 87 78 chr20 5410965 5410986 -66742896 - L2 LINE L2 -770 2544 2525 2268 133 0 0 chr20 5410986 5411295 -66742587 + AluSx SINE Alu 1 309 -3 862 288 87 78 chr20 5411295 5411759 -66742123 - L2 LINE L2 -789 2525 2046 674 216 0 0 chr20 5411870 5411986 -66741896 + FLAM_C SINE Alu 1 116 -17 204 200 0 0 chr20 5411987 5412047 -66741835 + T-rich Low_complexity Low_complexity 1 60 0 2345 119 0 0 chr20 5412119 5412430 -66741452 + AluSx SINE Alu 1 311 -1 2221 121 7 0 chr20 5412430 5412735 -66741147 + AluSp SINE Alu 1 307 -6 320 247 14 0 chr20 5412735 5412808 -66741074 - LTR16A1 LTR ERVL -14 443 370 492 239 64 0 chr20 5412809 5412918 -66740964 - FLAM_C SINE Alu -24 119 4 916 184 19 6 chr20 5412992 5413150 -66740732 + FRAM SINE Alu 1 160 -16 441 272 45 75 chr20 5413159 5413424 -66740458 - LTR16A1 LTR ERVL -141 316 60 1703 136 0 32 chr20 5413524 5413775 -66740107 + AluSq SINE Alu 1 243 -70 343 212 0 59 chr20 5413912 5413997 -66739885 + MIR SINE MIR 77 156 -106 2018 132 28 0 chr20 5414016 5414303 -66739579 + AluSx SINE Alu 1 295 -17 646 179 37 49 chr20 5414330 5414492 -66739390 - MIR SINE MIR -11 251 92 1869 155 24 10 chr20 5414492 5414788 -66739094 + AluJb SINE Alu 6 305 -7 671 180 0 33 chr20 5414868 5414990 -66738892 + FLAM_C SINE Alu 1 118 -15 2377 108 0 0 chr20 5415197 5415503 -66738379 + AluSx SINE Alu 7 312 0 294 327 192 24 chr20 5415574 5415913 -66737969 - L2 LINE L2 0 3313 2918 519 241 21 7 chr20 5416272 5416413 -66737469 - L1ME3 LINE L1 -50 6112 5970 189 0 0 0 chr20 5416438 5416459 -66737423 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 741 68 0 0 chr20 5416485 5416573 -66737309 + AluSg SINE Alu 52 139 -171 2193 104 0 22 chr20 5416573 5416889 -66736993 + AluSc SINE Alu 1 309 0 1165 239 41 52 chr20 5416889 5417017 -66736865 - L1MC4 LINE L1 -228 7814 7686 2571 74 0 0 chr20 5417017 5417328 -66736554 - AluY SINE Alu 0 311 1 1165 239 41 52 chr20 5417328 5417434 -66736448 - L1MC4 LINE L1 -356 7686 7580 1926 154 30 7 chr20 5417434 5417739 -66736143 - AluJb SINE Alu 0 312 1 1165 239 41 52 chr20 5417739 5417921 -66735961 - L1MC4 LINE L1 -462 7580 7400 796 226 169 19 chr20 5417921 5418045 -66735837 - AluJo SINE Alu -1 301 197 2299 95 20 0 chr20 5418045 5418340 -66735542 - AluSx SINE Alu -9 303 3 796 226 169 19 chr20 5418340 5418476 -66735406 - AluJo SINE Alu -105 197 2 1165 239 41 52 chr20 5418476 5418497 -66735385 - L1MC4 LINE L1 -642 7400 7380 4156 170 47 49 chr20 5418509 5418543 -66735339 - L1MB3 LINE L1 -1 6182 6149 2310 97 3 3 chr20 5418543 5418843 -66735039 - AluSq SINE Alu -13 300 1 4156 170 47 49 chr20 5418843 5419593 -66734289 - L1MB3 LINE L1 -34 6149 5399 2360 112 0 6 chr20 5419593 5419907 -66733975 - AluSx SINE Alu 0 312 1 4156 170 47 49 chr20 5419907 5419935 -66733947 - L1MB3 LINE L1 -784 5399 5372 1901 174 10 3 chr20 5419935 5420245 -66733637 + AluJb SINE Alu 1 312 0 4156 170 47 49 chr20 5420245 5420270 -66733612 - L1MB3 LINE L1 -811 5372 5348 776 131 54 31 chr20 5420270 5420400 -66733482 - FLAM_A SINE Alu 0 133 1 4156 170 47 49 chr20 5420400 5420570 -66733312 - L1MB3 LINE L1 -835 5348 5155 2197 107 7 3 chr20 5420581 5420872 -66733010 + AluSg SINE Alu 1 292 -18 733 68 34 59 chr20 5420872 5420981 -66732901 - AluJo/FRAM SINE Alu -21 291 184 690 13 0 0 chr20 5420987 5421066 -66732816 + (TTTTC)n Simple_repeat Simple_repeat 2 80 0 981 185 0 0 chr20 5421068 5421225 -66732657 - AluJb SINE Alu -31 281 125 400 256 47 0 chr20 5421235 5421321 -66732561 + L1MC4 LINE L1 6614 6703 -1339 745 156 62 8 chr20 5421322 5421450 -66732432 - AluJb SINE Alu -176 136 2 281 79 0 0 chr20 5421476 5421514 -66732368 - MER4D LTR ERV1 -74 798 761 1454 209 38 3 chr20 5421523 5421862 -66732020 - L1M4 LINE L1 -950 5196 4846 441 36 0 0 chr20 5421864 5421919 -66731963 + (TCTCCC)n Simple_repeat Simple_repeat 1 55 0 5563 79 39 9 chr20 5421919 5422705 -66731177 + SVA Other Other 57 866 -520 6765 66 34 28 chr20 5422720 5423672 -66730210 + SVA Other Other 430 1386 0 938 204 0 0 chr20 5423684 5423870 -66730012 - L1M4 LINE L1 -1287 4859 4674 2284 131 0 0 chr20 5424119 5424431 -66729451 + AluSx SINE Alu 1 312 0 2125 102 3 31 chr20 5424668 5424993 -66728889 + AluSp SINE Alu 1 317 0 727 183 21 14 chr20 5425185 5425327 -66728555 + FRAM SINE Alu 26 168 -8 831 254 26 29 chr20 5425577 5425849 -66728033 + LTR16C LTR ERVL 213 483 -8 356 234 39 39 chr20 5425859 5425941 -66727941 - L1MC4a LINE L1 -1902 5906 5822 2117 136 3 0 chr20 5425941 5426235 -66727647 - AluJb SINE Alu -4 308 14 356 234 39 39 chr20 5426235 5426280 -66727602 - L1MC4a LINE L1 -1985 5823 5779 215 225 0 0 chr20 5426532 5426572 -66727310 + CT-rich Low_complexity Low_complexity 4 43 0 300 231 0 44 chr20 5426653 5426744 -66727138 + Charlie8 DNA MER1_type 64 150 -2267 2079 98 0 52 chr20 5426788 5427094 -66726788 + AluSq SINE Alu 1 290 -23 2179 121 0 13 chr20 5427314 5427482 -66726400 - AluSx SINE Alu -11 301 137 2429 91 0 13 chr20 5427482 5427789 -66726093 - AluSx SINE Alu -9 303 1 2179 121 0 13 chr20 5427789 5427925 -66725957 - AluSx SINE Alu -175 137 1 711 207 0 0 chr20 5427968 5428089 -66725793 + FRAM SINE Alu 25 145 -31 1383 85 0 0 chr20 5428090 5428254 -66725628 - AluSp SINE Alu -14 299 136 201 147 0 0 chr20 5428267 5428301 -66725581 + (CAA)n Simple_repeat Simple_repeat 2 35 0 622 167 28 0 chr20 5428301 5428409 -66725473 - MER5A DNA MER1_type -75 114 4 253 118 0 0 chr20 5428784 5428818 -66725064 - MIR SINE MIR -150 112 79 1297 165 180 19 chr20 5428985 5429099 -66724783 + AluJo SINE Alu 1 95 -217 2256 136 0 0 chr20 5429099 5429408 -66724474 + AluSx SINE Alu 1 309 -3 1297 165 180 19 chr20 5429408 5429560 -66724322 + AluJo SINE Alu 95 310 -2 2257 115 0 0 chr20 5430009 5430305 -66723577 - AluSx SINE Alu -16 296 1 1652 188 20 3 chr20 5430314 5430606 -66723276 - AluJo SINE Alu -15 297 1 1626 180 6 60 chr20 5430618 5430934 -66722948 - AluJb SINE Alu -13 299 1 2284 107 10 13 chr20 5430970 5431279 -66722603 - AluSc SINE Alu 0 309 2 839 258 80 103 chr20 5431497 5431573 -66722309 + L1ME2 LINE L1 3375 3451 -2695 1664 93 14 0 chr20 5431573 5431789 -66722093 + AluSq SINE Alu 1 219 -94 839 258 80 103 chr20 5431789 5432197 -66721685 + L1ME2 LINE L1 3451 3848 -2298 673 86 0 32 chr20 5432201 5432294 -66721588 + AluSg/x SINE Alu 157 246 -63 1228 157 32 9 chr20 5432295 5432328 -66721554 + AluSg/x SINE Alu 83 114 -196 222 37 0 0 chr20 5432328 5432355 -66721527 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 1228 157 32 9 chr20 5432355 5432537 -66721345 + AluSg/x SINE Alu 114 303 -7 2274 113 7 0 chr20 5432541 5432851 -66721031 + AluSq SINE Alu 1 312 -1 408 73 0 0 chr20 5432852 5432920 -66720962 + AluSp/q SINE Alu 246 313 0 402 267 26 35 chr20 5432922 5433038 -66720844 + L1ME2 LINE L1 5152 5266 -880 180 0 0 0 chr20 5433046 5433066 -66720816 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2340 94 17 0 chr20 5433095 5433392 -66720490 + AluSq SINE Alu 1 302 -11 252 267 88 13 chr20 5433418 5433620 -66720262 + L1ME2 LINE L1 5272 5485 -677 1952 147 0 66 chr20 5433646 5433779 -66720103 + AluJb SINE Alu 1 141 -171 1923 134 14 3 chr20 5433779 5434070 -66719812 - AluSx SINE Alu -17 295 2 1952 147 0 66 chr20 5434070 5434269 -66719613 + AluJb SINE Alu 141 311 -1 278 231 39 0 chr20 5434277 5434355 -66719527 - MLT1L LTR MaLR -13 602 522 825 205 12 6 chr20 5434361 5434527 -66719355 + AluJb SINE Alu 137 303 -9 644 303 59 28 chr20 5434996 5435048 -66718834 + L1ME2 LINE L1 5482 5531 -633 1995 148 10 3 chr20 5435048 5435346 -66718536 + AluJb SINE Alu 6 305 -7 849 119 0 37 chr20 5435350 5435484 -66718398 + FLAM_C SINE Alu 1 129 -4 644 303 59 28 chr20 5435484 5435881 -66718001 + L1ME2 LINE L1 5533 5931 -233 2061 142 3 3 chr20 5436059 5436362 -66717520 + AluSx SINE Alu 1 303 -9 488 253 177 0 chr20 5436517 5436675 -66717207 - MER5A DNA MER1_type 0 189 4 1672 65 28 0 chr20 5436938 5437153 -66716729 - AluSg/x SINE Alu -8 304 84 2435 75 6 40 chr20 5437248 5437570 -66716312 - AluSq SINE Alu -2 311 1 1086 98 0 0 chr20 5437573 5437705 -66716177 - AluSp SINE Alu -181 132 1 1899 166 13 0 chr20 5437804 5438105 -66715777 - AluJb SINE Alu -7 305 1 1777 174 13 23 chr20 5438630 5438934 -66714948 - AluJb SINE Alu -11 301 1 586 274 208 0 chr20 5439023 5439235 -66714647 + MIR SINE MIR 4 259 -3 457 279 104 13 chr20 5439240 5439394 -66714488 + MER5B DNA MER1_type 9 176 -2 2003 136 3 32 chr20 5439433 5439743 -66714139 - AluSq SINE Alu -12 301 1 2229 101 28 0 chr20 5440128 5440415 -66713467 + AluSg1 SINE Alu 1 295 -14 2298 93 0 7 chr20 5440436 5440736 -66713146 + AluSx SINE Alu 1 298 -14 3033 187 45 77 chr20 5440886 5441501 -66712381 + L1 LINE L1 3842 4424 -1722 2192 108 3 0 chr20 5441501 5441806 -66712076 + AluSp SINE Alu 1 306 -7 3033 187 45 77 chr20 5441806 5442033 -66711849 + L1 LINE L1 4424 4657 -1489 1083 107 0 47 chr20 5442208 5442377 -66711505 - AluSg/x SINE Alu -18 294 134 2010 94 40 0 chr20 5442377 5442652 -66711230 - AluSq SINE Alu -14 299 14 24 0 0 0 chr20 5442723 5442747 -66711135 + AT_rich Low_complexity Low_complexity 1 24 0 321 156 0 31 chr20 5442750 5442814 -66711068 - FRAM SINE Alu -67 99 38 387 220 2 2 chr20 5442818 5442895 -66710987 + AluJ/FLAM SINE Alu 2 66 -236 738 165 0 24 chr20 5442896 5443023 -66710859 + AluJo/FRAM SINE Alu 164 287 -25 389 152 0 0 chr20 5443048 5443114 -66710768 + FAM SINE Alu 114 179 0 238 65 22 22 chr20 5443150 5443196 -66710686 + (TAAAAA)n Simple_repeat Simple_repeat 5 50 0 1677 147 28 3 chr20 5443233 5443518 -66710364 - AluSx SINE Alu -18 294 3 313 223 80 63 chr20 5443618 5443793 -66710089 - L1MC4a LINE L1 -1788 6020 5843 1721 134 11 0 chr20 5443835 5444104 -66709778 - AluSx SINE Alu -5 307 36 290 266 64 18 chr20 5444142 5444251 -66709631 - HAL1b LINE L1 -776 572 459 305 278 93 96 chr20 5444255 5444361 -66709521 - HAL1b LINE L1 -931 417 312 1610 133 28 0 chr20 5444361 5444609 -66709273 - AluSx SINE Alu -11 301 47 305 278 93 96 chr20 5444609 5444772 -66709110 - HAL1b LINE L1 -1036 312 149 270 222 62 25 chr20 5444834 5444915 -66708967 - MLT1J LTR MaLR -35 476 393 706 119 336 0 chr20 5445447 5445590 -66708292 - AluSg/x SINE Alu -1 311 121 567 97 0 21 chr20 5445606 5445699 -66708183 - Alu SINE Alu 0 311 221 303 53 0 0 chr20 5445701 5445739 -66708143 - AluSq SINE Alu -132 171 134 2087 120 0 0 chr20 5445739 5446098 -66707784 - AluSg SINE Alu 0 310 1 2041 125 17 0 chr20 5446114 5446409 -66707473 - AluSx SINE Alu -12 300 1 737 208 100 50 chr20 5446439 5446680 -66707202 + MER63C DNA MER1_type 263 515 -415 378 143 48 0 chr20 5446673 5446736 -66707146 - AluJ/FRAM SINE Alu -8 294 229 * 855 161 0 0 chr20 5446736 5446873 -66707009 + AluSp/q SINE Alu 161 297 -16 620 215 29 67 chr20 5446873 5446936 -66706946 - MER63C DNA MER1_type -729 201 137 1227 164 97 53 chr20 5446936 5447139 -66706743 + AluJb SINE Alu 1 223 -89 2106 81 3 55 chr20 5447139 5447447 -66706435 + AluSp SINE Alu 1 292 -21 1227 164 97 53 chr20 5447447 5447542 -66706340 + AluJb SINE Alu 223 312 0 620 215 29 67 chr20 5447542 5447687 -66706195 - MER63C DNA MER1_type -793 137 1 264 30 0 0 chr20 5447755 5447788 -66706094 + (TG)n Simple_repeat Simple_repeat 2 34 0 776 204 0 0 chr20 5447788 5447925 -66705957 - AluJb SINE Alu -12 300 164 1637 96 5 0 chr20 5447925 5448145 -66705737 - AluSg/x SINE Alu -26 286 66 419 208 127 58 chr20 5448181 5448354 -66705528 + L2 LINE L2 2533 2717 -597 863 171 7 0 chr20 5448357 5448503 -66705379 + FRAM SINE Alu 1 146 -30 3368 102 22 0 chr20 5448509 5448970 -66704912 + MER11B LTR ERVK 1 471 -765 1098 123 6 28 chr20 5449026 5449205 -66704677 + MLT1B LTR MaLR 1 175 -215 1331 164 0 17 chr20 5449210 5449442 -66704440 + AluJo SINE Alu 1 228 -84 2060 122 30 0 chr20 5449454 5449758 -66704124 + AluSq SINE Alu 1 313 0 1431 121 22 9 chr20 5449758 5449971 -66703911 + MLT1B LTR MaLR 172 390 0 249 178 0 0 chr20 5449975 5450020 -66703862 + L2 LINE L2 2744 2788 -526 1013 90 0 0 chr20 5450663 5450796 -66703086 + AluSq/x SINE Alu 1 133 -180 1386 145 37 0 chr20 5450801 5451015 -66702867 + AluSg/x SINE Alu 81 302 -8 1820 234 38 20 chr20 5451017 5451060 -66702822 + LTR16A1 LTR ERVL 1 42 -415 1951 133 24 87 chr20 5451060 5451379 -66702503 - MLT1B LTR MaLR 0 390 101 2341 80 0 0 chr20 5451379 5451690 -66702192 + AluY SINE Alu 1 311 0 1951 133 24 87 chr20 5451690 5451783 -66702099 - MLT1B LTR MaLR -289 101 4 1820 234 38 20 chr20 5451783 5452188 -66701694 + LTR16A1 LTR ERVL 42 457 0 381 179 0 0 chr20 5452188 5452255 -66701627 - AluJ/FRAM SINE Alu -3 299 233 372 306 10 97 chr20 5452255 5452335 -66701547 + L3 LINE CR1 664 749 -828 764 134 118 0 chr20 5452335 5452454 -66701428 + FLAM_C SINE Alu 1 133 0 372 306 10 97 chr20 5452454 5452569 -66701313 + L3 LINE CR1 749 842 -735 2014 103 21 4 chr20 5452574 5452877 -66701005 - AluSq SINE Alu 0 308 1 1980 134 7 0 chr20 5452978 5453269 -66700613 - AluSx SINE Alu -18 294 2 1005 162 0 57 chr20 5453705 5453933 -66699949 + AluJo SINE Alu 1 215 -97 330 210 12 0 chr20 5454061 5454142 -66699740 - MLT1I LTR MaLR -4 405 324 617 165 9 0 chr20 5454148 5454257 -66699625 - AluJb SINE Alu -1 311 202 1304 173 54 30 chr20 5454605 5454759 -66699123 - AluJo SINE Alu -10 302 153 2090 107 26 13 chr20 5454759 5455067 -66698815 - AluSx SINE Alu 0 312 1 1304 173 54 30 chr20 5455067 5455207 -66698675 - AluJo SINE Alu -159 153 1 615 270 86 51 chr20 5455269 5455328 -66698554 - L1ME3A LINE L1 -220 5950 5895 2101 135 0 0 chr20 5455328 5455632 -66698250 - AluSx SINE Alu -8 304 1 615 270 86 51 chr20 5455632 5456038 -66697844 - L1ME3A LINE L1 -275 5895 5447 542 200 11 0 chr20 5456243 5456338 -66697544 - MER117 DNA MER1_type -42 155 60 533 213 11 0 chr20 5456348 5456442 -66697440 + MER5A DNA MER1_type 9 103 -86 491 338 18 31 chr20 5456554 5456782 -66697100 + L3 LINE CR1 594 818 -759 2220 95 3 7 chr20 5456934 5457238 -66696644 + AluSq SINE Alu 1 303 -10 884 132 0 22 chr20 5457249 5457385 -66696497 + FLAM_C SINE Alu 1 133 0 1695 157 0 24 chr20 5457469 5457756 -66696126 + AluJb SINE Alu 1 280 -32 203 0 37 0 chr20 5457756 5457783 -66696099 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 285 251 164 47 chr20 5457899 5458070 -66695812 + L3 LINE CR1 967 1157 -420 2139 119 0 3 chr20 5458273 5458584 -66695298 - AluSx SINE Alu -2 310 1 278 367 0 0 chr20 5458591 5458689 -66695193 + L3 LINE CR1 1254 1351 -226 432 282 60 45 chr20 5458735 5458979 -66694903 + L1M4 LINE L1 2783 3022 -3124 2118 119 0 3 chr20 5458979 5459282 -66694600 + AluSx SINE Alu 1 302 -10 2243 82 3 0 chr20 5459290 5459584 -66694298 + AluSp SINE Alu 1 295 -18 432 282 60 45 chr20 5459584 5459879 -66694003 + L1M4 LINE L1 3028 3339 -2807 853 149 0 8 chr20 5459884 5460018 -66693864 + FLAM_C SINE Alu 1 133 -10 241 188 0 0 chr20 5460035 5460083 -66693799 + L1M LINE L1 5346 5393 -787 212 264 58 97 chr20 5460084 5460133 -66693749 + L3 LINE CR1 1338 1387 -190 811 147 16 8 chr20 5460133 5460262 -66693620 + FLAM_C SINE Alu 2 131 -2 212 264 58 97 chr20 5460262 5460367 -66693515 + L3 LINE CR1 1387 1486 -91 2153 83 17 20 chr20 5461385 5461685 -66692197 + AluSx SINE Alu 3 301 -11 655 305 121 23 chr20 5461965 5462313 -66691569 - LTR16C LTR ERVL -1 490 109 450 0 0 0 chr20 5462406 5462456 -66691426 + (TA)n Simple_repeat Simple_repeat 2 51 0 2015 107 11 0 chr20 5462456 5462736 -66691146 - AluSg SINE Alu -27 283 1 1704 158 10 30 chr20 5462758 5463061 -66690821 - AluJb SINE Alu -15 297 1 534 193 39 180 chr20 5463134 5463323 -66690559 - MLT1J LTR MaLR -243 268 138 2043 138 29 35 chr20 5463323 5463699 -66690183 - THE1C LTR MaLR -1 374 1 534 193 39 180 chr20 5463699 5463820 -66690062 - MLT1J LTR MaLR -373 138 2 274 133 0 33 chr20 5464637 5464697 -66689185 + (TTCCC)n Simple_repeat Simple_repeat 1 58 0 1991 137 7 0 chr20 5464697 5465004 -66688878 - AluSx SINE Alu -2 310 2 728 264 127 75 chr20 5465008 5465473 -66688409 + MLT1H1 LTR MaLR 65 553 -2 720 209 16 0 chr20 5465765 5465894 -66687988 - AluJb SINE Alu -13 299 169 2259 80 7 0 chr20 5466338 5466640 -66687242 + AluSq SINE Alu 1 304 -9 1973 112 10 36 chr20 5466742 5467046 -66686836 - AluSx SINE Alu -16 296 1 1579 171 3 30 chr20 5467046 5467351 -66686531 - AluJo SINE Alu -15 297 1 2319 87 0 0 chr20 5467562 5467871 -66686011 + AluSx SINE Alu 1 309 -3 511 263 119 34 chr20 5467935 5468171 -66685711 - LTR16C LTR ERVL -3 488 233 480 188 10 20 chr20 5468714 5468815 -66685067 + MER34C LTR ERV1 37 136 -449 2368 144 37 0 chr20 5468837 5469220 -66684662 - MSTB LTR MaLR -29 397 1 758 225 81 101 chr20 5469220 5469651 -66684231 + MER34 LTR ERV1 100 521 -21 810 165 8 0 chr20 5469652 5469785 -66684097 + AluJo SINE Alu 1 134 -178 754 176 7 29 chr20 5469822 5469958 -66683924 - FLAM_C SINE Alu 0 133 1 2322 84 3 0 chr20 5470062 5470360 -66683522 - AluSp SINE Alu -14 299 1 2079 115 0 10 chr20 5470437 5470751 -66683131 + AluSx SINE Alu 1 311 -1 1585 144 8 19 chr20 5470853 5471117 -66682765 + AluJb SINE Alu 35 295 -17 2103 104 10 3 chr20 5471254 5471563 -66682319 + AluSx SINE Alu 1 311 -1 2279 102 0 0 chr20 5471669 5471973 -66681909 - AluSx SINE Alu -8 304 1 1881 137 0 7 chr20 5472019 5472328 -66681554 + AluJo SINE Alu 1 307 0 337 276 35 0 chr20 5472330 5472417 -66681465 - L2 LINE L2 -14 3299 3210 921 100 46 0 chr20 5472418 5472548 -66681334 + AluSq/x SINE Alu 1 136 -176 1885 144 3 0 chr20 5472549 5472840 -66681042 + AluSx SINE Alu 3 294 -18 279 311 61 30 chr20 5472840 5472972 -66680910 - L2 LINE L2 -94 3219 3084 999 169 0 45 chr20 5473146 5473324 -66680558 + MER45A DNA AcHobo 8 177 -1 641 248 64 5 chr20 5473468 5473764 -66680118 - MLT1I LTR MaLR 0 409 52 892 146 0 14 chr20 5473794 5473938 -66679944 - AluJb SINE Alu -23 289 148 433 244 87 74 chr20 5473964 5474150 -66679732 - L1M4 LINE L1 -1219 4927 4745 761 177 8 0 chr20 5474150 5474280 -66679602 - FLAM_A SINE Alu 0 133 3 433 244 87 74 chr20 5474280 5474483 -66679399 - L1M4 LINE L1 -1401 4745 4533 845 162 101 0 chr20 5474487 5474635 -66679247 - FRAM SINE Alu -3 163 1 1105 167 0 0 chr20 5474744 5474930 -66678952 - AluJb SINE Alu -6 306 121 337 327 137 24 chr20 5475052 5475220 -66678662 - L1M4 LINE L1 -1717 4429 4243 1653 138 98 0 chr20 5475559 5475835 -66678047 - AluSx SINE Alu -9 303 1 549 262 283 0 chr20 5475890 5476134 -66677748 + MER5C DNA MER1_type 11 323 -1 1950 105 38 42 chr20 5476857 5477170 -66676712 - AluSx SINE Alu 0 312 1 1138 165 0 0 chr20 5477228 5477416 -66676466 - AluJb SINE Alu -4 308 121 1993 128 0 7 chr20 5477441 5477739 -66676143 - AluSx SINE Alu -16 296 1 2281 94 0 0 chr20 5477915 5478223 -66675659 - AluSq SINE Alu -5 308 1 198 0 0 0 chr20 5478281 5478303 -66675579 + (T)n Simple_repeat Simple_repeat 1 22 0 446 115 52 62 chr20 5478303 5478399 -66675483 - LTR9 LTR ERV1 -86 526 432 356 186 0 35 chr20 5478425 5478511 -66675371 - L1M4 LINE L1 -2196 3950 3868 343 338 40 59 chr20 5478566 5478844 -66675038 - L1M4 LINE L1 -2368 3778 3496 2397 133 2 84 chr20 5478844 5479222 -66674660 - L1PA15 LINE L1 -2 6163 5756 2267 89 0 0 chr20 5479222 5479514 -66674368 - AluSg SINE Alu -15 295 4 2397 133 2 84 chr20 5479514 5479527 -66674355 - L1PA15 LINE L1 -409 5756 5810 2192 103 3 0 chr20 5479527 5479829 -66674053 - AluSx SINE Alu -9 303 1 2397 133 2 84 chr20 5479829 5479887 -66673995 - L1PA15 LINE L1 -354 5811 5750 343 338 40 59 chr20 5479887 5480022 -66673860 - L1M4 LINE L1 -2650 3496 3376 2175 117 10 0 chr20 5480272 5480581 -66673301 - AluSx SINE Alu 0 312 1 966 91 15 15 chr20 5481109 5481241 -66672641 + FLAM_C SINE Alu 2 133 0 2240 96 0 3 chr20 5481251 5481563 -66672319 + AluSx SINE Alu 1 311 -1 1027 190 0 0 chr20 5481688 5481862 -66672020 - AluJb SINE Alu -5 307 134 1703 179 3 0 chr20 5481862 5482169 -66671713 - AluJo SINE Alu -4 308 1 412 171 118 0 chr20 5482497 5482573 -66671309 - AluSg/x SINE Alu -19 291 207 198 0 0 0 chr20 5482692 5482714 -66671168 + (T)n Simple_repeat Simple_repeat 1 22 0 1214 131 0 0 chr20 5482813 5482988 -66670894 - AluSx SINE Alu -137 175 1 2293 93 0 0 chr20 5483022 5483324 -66670558 + AluSx SINE Alu 1 302 -10 405 133 0 17 chr20 5483488 5483548 -66670334 - AluJ/FLAM SINE Alu -249 63 5 1338 156 31 35 chr20 5483552 5483809 -66670073 - AluJo SINE Alu -56 256 1 258 178 0 0 chr20 5483928 5483973 -66669909 - L2 LINE L2 -605 2709 2665 2075 121 0 3 chr20 5484088 5484394 -66669488 + AluY SINE Alu 1 305 -6 1960 152 0 3 chr20 5484413 5484722 -66669160 + AluSx SINE Alu 1 308 -4 1700 96 69 4 chr20 5484749 5485031 -66668851 + AluSx SINE Alu 7 305 0 934 218 131 33 chr20 5485033 5485460 -66668422 + HAL1 LINE L1 1103 1571 -936 1059 281 67 17 chr20 5485530 5486006 -66667876 + HAL1 LINE L1 1958 2457 -50 1043 159 11 0 chr20 5486006 5486182 -66667700 - AluJo SINE Alu -22 290 113 2009 112 35 0 chr20 5486219 5486506 -66667376 - AluSp SINE Alu -16 297 1 479 177 0 13 chr20 5486526 5486605 -66667277 + MER2 DNA MER2_type 268 345 0 2380 161 53 95 chr20 5487379 5487431 -66666451 + L1 LINE L1 3827 3880 -2266 2263 74 10 0 chr20 5487431 5487728 -66666154 + AluSp SINE Alu 1 300 -13 2380 161 53 95 chr20 5487728 5488239 -66665643 + L1 LINE L1 3880 4411 -1735 1716 153 37 0 chr20 5488239 5488533 -66665349 - AluJb SINE Alu -4 308 4 1897 130 3 7 chr20 5488534 5488833 -66665049 - AluSx SINE Alu -14 298 1 2380 161 53 95 chr20 5488833 5488910 -66664972 + L1 LINE L1 4410 4443 -1703 2191 97 0 16 chr20 5488942 5489252 -66664630 - AluSg SINE Alu -5 305 1 1214 184 68 43 chr20 5489252 5489422 -66664460 - AluJo SINE Alu -15 287 106 2196 96 7 0 chr20 5489422 5489724 -66664158 + AluSg SINE Alu 1 304 -6 1214 184 68 43 chr20 5489724 5489831 -66664051 - AluJo SINE Alu -196 106 3 393 289 147 19 chr20 5490679 5490835 -66663047 - MER5A DNA MER1_type 0 189 14 439 200 78 17 chr20 5491266 5491381 -66662501 - MIR SINE MIR -24 238 117 187 237 303 0 chr20 5491823 5491899 -66661983 - L2 LINE L2 -5 3267 3169 334 280 49 21 chr20 5492267 5492410 -66661472 + L3 LINE CR1 1112 1258 -319 1947 97 100 0 chr20 5492626 5492905 -66660977 - AluSx SINE Alu -5 307 1 2313 92 13 0 chr20 5492965 5493270 -66660612 - AluSp SINE Alu -4 309 1 636 124 0 0 chr20 5493382 5493471 -66660411 - 5S rRNA rRNA -31 90 2 201 345 26 9 chr20 5493471 5493584 -66660298 + L3 LINE CR1 1284 1398 -179 832 218 0 0 chr20 5494040 5494257 -66659625 + FRAM SINE Alu 1 81 0 732 237 167 31 chr20 5494455 5494742 -66659140 + L2 LINE L2 2135 2460 -854 23 33 0 0 chr20 5495382 5495412 -66658470 + AT_rich Low_complexity Low_complexity 1 30 0 230 210 24 99 chr20 5496251 5496384 -66657498 - L1M3 LINE L1 -367 5813 5689 1805 176 3 25 chr20 5496404 5496723 -66657159 - AluJo SINE Alu 0 312 1 2427 181 25 23 chr20 5497257 5497404 -66656478 + L1MA3 LINE L1 3423 3568 -2578 1857 171 7 0 chr20 5497404 5497708 -66656174 + AluJb SINE Alu 1 306 -6 2427 181 25 23 chr20 5497708 5498078 -66655804 + L1MA3 LINE L1 3568 3941 -2205 1308 127 97 158 chr20 5498079 5498179 -66655703 + AluJb SINE Alu 3 107 -205 1531 184 0 8 chr20 5498179 5498429 -66655453 + AluJo SINE Alu 5 252 -60 1308 127 97 158 chr20 5498429 5498658 -66655224 + AluJb SINE Alu 107 312 0 5884 104 73 64 chr20 5498662 5499237 -66654645 + L1MA3 LINE L1 4873 5441 -864 882 93 0 0 chr20 5499237 5499355 -66654527 - FLAM_C SINE Alu -15 118 1 5884 104 73 64 chr20 5499355 5499998 -66653884 + L1MA3 LINE L1 5441 6076 -229 1864 153 0 3 chr20 5499998 5500286 -66653596 + AluSx SINE Alu 1 287 -25 5884 104 73 64 chr20 5500286 5500342 -66653540 + L1MA3 LINE L1 6076 6130 -175 1453 124 200 0 chr20 5500342 5500592 -66653290 + AluSg SINE Alu 1 300 0 5884 104 73 64 chr20 5500592 5500745 -66653137 + L1MA3 LINE L1 6130 6305 0 1577 133 53 93 chr20 5500752 5501054 -66652828 + AluJb SINE Alu 1 290 -22 414 39 0 0 chr20 5501070 5501122 -66652760 + (CA)n Simple_repeat Simple_repeat 2 53 0 2314 99 0 10 chr20 5501390 5501702 -66652180 - AluSq SINE Alu -4 309 1 1967 149 0 7 chr20 5501714 5502003 -66651879 - AluJo SINE Alu -25 287 1 1846 137 4 0 chr20 5502029 5502299 -66651583 + AluJb SINE Alu 15 285 -27 1209 195 0 0 chr20 5502630 5502825 -66651057 + AluJb SINE Alu 104 298 -14 1948 137 3 7 chr20 5502825 5503131 -66650751 + AluSx SINE Alu 1 305 0 2336 103 3 0 chr20 5503133 5503443 -66650439 + AluSp SINE Alu 1 311 -2 187 303 30 40 chr20 5504765 5504864 -66649018 - MIR3 SINE MIR -105 103 6 1378 152 0 25 chr20 5505037 5505281 -66648601 - AluSg/x SINE Alu 0 312 75 1995 131 28 0 chr20 5505283 5505574 -66648308 - AluSx SINE Alu -13 299 1 2182 133 0 0 chr20 5505895 5506195 -66647687 + AluSx SINE Alu 1 300 -12 2330 113 0 0 chr20 5506324 5506634 -66647248 + AluSg SINE Alu 1 310 0 2268 97 3 6 chr20 5506833 5507144 -66646738 - AluSg SINE Alu 0 310 1 418 254 56 0 chr20 5508699 5508825 -66645057 - L1ME1 LINE L1 -52 6114 5982 532 157 12 0 chr20 5509001 5509084 -66644798 - HY4 scRNA scRNA -9 84 1 2099 111 21 17 chr20 5509089 5509377 -66644505 - AluSx SINE Alu -22 290 2 1269 195 99 64 chr20 5510664 5511151 -66642731 + L1MC5 LINE L1 6971 7474 -487 1060 166 11 6 chr20 5511184 5511359 -66642523 + FRAM SINE Alu 1 176 0 232 252 81 41 chr20 5511505 5511628 -66642254 - MIR SINE MIR -3 259 132 1403 143 0 0 chr20 5511655 5511858 -66642024 - AluSg/x SINE Alu -14 296 94 212 297 27 36 chr20 5511971 5512082 -66641800 + MIR SINE MIR 84 193 -69 1099 184 20 33 chr20 5513301 5513546 -66640336 + AluJo SINE Alu 55 296 -16 449 134 24 0 chr20 5514169 5514251 -66639631 + FLAM_A SINE Alu 44 127 -15 2160 84 0 53 chr20 5515800 5516123 -66637759 - AluSx SINE Alu 0 307 1 275 297 66 0 chr20 5516288 5516379 -66637503 - L1MEd LINE L1 -4895 1224 1128 207 100 0 0 chr20 5516379 5516409 -66637473 + (T)n Simple_repeat Simple_repeat 1 30 0 1270 162 160 46 chr20 5516560 5516625 -66637257 - HsTC2 DNA Tc2 -15 1883 1827 1586 187 17 7 chr20 5516625 5516925 -66636957 - AluJo SINE Alu -9 303 1 1270 162 160 46 chr20 5516925 5516970 -66636912 - HsTC2 DNA Tc2 -71 1827 1789 2407 110 0 0 chr20 5516970 5517280 -66636602 - AluSx SINE Alu 0 312 3 1270 162 160 46 chr20 5517280 5517562 -66636320 - HsTC2 DNA Tc2 -109 1789 1269 1194 234 45 6 chr20 5517559 5517871 -66636011 - HsTC2 DNA Tc2 -1385 513 190 * 330 273 186 51 chr20 5517996 5518230 -66635652 - L2 LINE L2 -255 3058 2793 2347 96 0 0 chr20 5518417 5518710 -66635172 + AluSx SINE Alu 5 297 -15 328 236 64 9 chr20 5518904 5519014 -66634868 - MLT1K LTR MaLR 0 588 473 724 296 58 10 chr20 5519038 5519329 -66634553 + L1ME LINE L1 5378 5682 -439 2211 96 30 3 chr20 5519354 5519657 -66634225 + AluSq SINE Alu 1 311 -2 1064 182 0 6 chr20 5520060 5520236 -66633646 + AluJo SINE Alu 4 178 -134 952 123 0 0 chr20 5520341 5520471 -66633411 + FLAM_C SINE Alu 2 131 -2 35 63 0 0 chr20 5520471 5520534 -66633348 + AT_rich Low_complexity Low_complexity 1 63 0 272 267 40 10 chr20 5520706 5520807 -66633075 + MIR SINE MIR 2 105 -157 1822 68 124 8 chr20 5520952 5521201 -66632681 + AluSg SINE Alu 1 278 -32 267 31 0 0 chr20 5521204 5521236 -66632646 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 241 277 0 48 chr20 5521288 5521371 -66632511 + MIR SINE MIR 176 254 -8 203 240 20 0 chr20 5521703 5521753 -66632129 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 27 29 0 0 chr20 5521973 5522007 -66631875 + GC_rich Low_complexity Low_complexity 1 34 0 357 287 74 8 chr20 5523099 5523221 -66630661 + Charlie8 DNA MER1_type 93 222 -2195 558 141 0 0 chr20 5523499 5523584 -66630298 + FLAM_A SINE Alu 1 85 -57 2197 107 0 26 chr20 5524275 5524444 -66629438 - AluSg SINE Alu -10 300 141 2144 121 7 0 chr20 5524444 5524741 -66629141 - AluSp SINE Alu -13 300 2 2197 107 0 26 chr20 5524741 5524879 -66629003 - AluSg SINE Alu -169 141 1 2284 91 0 7 chr20 5524957 5525275 -66628607 - AluSq SINE Alu 0 316 1 2266 75 3 36 chr20 5525495 5525802 -66628080 + AluSp SINE Alu 1 297 -16 2573 53 0 7 chr20 5525810 5526112 -66627770 + AluY SINE Alu 1 300 -11 387 319 65 23 chr20 5526689 5526905 -66626977 + MIR SINE MIR 11 235 -27 2171 129 0 0 chr20 5527103 5527398 -66626484 - AluSx SINE Alu -17 295 1 2079 71 27 37 chr20 5527891 5528187 -66625695 + AluY SINE Alu 1 293 -18 979 180 0 6 chr20 5528257 5528418 -66625464 - AluJo SINE Alu -17 295 136 223 333 0 0 chr20 5528426 5528504 -66625378 - MIR SINE MIR -64 144 67 2228 95 10 3 chr20 5528530 5528825 -66625057 - AluSp SINE Alu -16 297 1 2375 112 0 0 chr20 5529509 5529821 -66624061 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 5530084 5530106 -66623776 + AT_rich Low_complexity Low_complexity 1 22 0 636 130 104 9 chr20 5530112 5530227 -66623655 - AluJo SINE Alu -185 127 2 1914 169 32 9 chr20 5531786 5532129 -66621753 - L1PA15 LINE L1 -4 6161 5811 2217 112 3 0 chr20 5532249 5532543 -66621339 - AluSx SINE Alu -17 295 1 829 83 83 38 chr20 5532640 5532773 -66621109 + AluJo SINE Alu 112 250 -62 2384 86 3 0 chr20 5532796 5533097 -66620785 - AluY SINE Alu -9 302 1 848 153 15 0 chr20 5533119 5533250 -66620632 - FLAM_C SINE Alu 0 133 1 1254 135 13 26 chr20 5533250 5533468 -66620414 - L1 LINE L1 -1149 4997 4781 1966 136 0 0 chr20 5533489 5533762 -66620120 - AluSq SINE Alu -16 297 25 612 95 0 0 chr20 5533764 5533848 -66620034 + AluSp/q SINE Alu 176 259 -54 237 154 0 0 chr20 5533848 5533887 -66619995 + L1 LINE L1 4547 4585 -1561 1069 138 0 0 chr20 5533901 5534060 -66619822 + L1 LINE L1 4639 4797 -1349 1824 142 0 65 chr20 5534060 5534384 -66619498 + AluSx SINE Alu 1 303 -9 2673 150 20 16 chr20 5534384 5534800 -66619082 - L1 LINE L1 -1817 4329 3909 2215 103 0 10 chr20 5534800 5535102 -66618780 - AluSx SINE Alu -13 299 1 2673 150 20 16 chr20 5535102 5535173 -66618709 - L1 LINE L1 -2237 3909 3840 311 244 68 27 chr20 5535152 5535373 -66618509 - L1ME LINE L1 -295 5826 5555 * 260 213 33 0 chr20 5535533 5535594 -66618288 + MIR SINE MIR 114 176 -86 792 220 157 33 chr20 5535597 5535897 -66617985 + L1MC5 LINE L1 7044 7380 -581 2630 175 62 161 chr20 5535957 5536930 -66616952 + MER21A LTR ERV1 39 914 -17 604 162 8 43 chr20 5537041 5537158 -66616724 + FLAM_C SINE Alu 13 125 -18 2162 130 0 0 chr20 5537165 5537457 -66616425 + AluSx SINE Alu 1 292 -20 264 218 122 20 chr20 5537460 5537607 -66616275 + L1MC5 LINE L1 7520 7681 -280 1750 239 72 18 chr20 5537628 5537853 -66616029 + L1ME LINE L1 5103 5314 -856 1766 155 41 3 chr20 5537853 5538144 -66615738 - AluJo SINE Alu -10 302 1 1750 239 72 18 chr20 5538144 5538540 -66615342 + L1ME LINE L1 5314 5746 -424 530 87 0 0 chr20 5538538 5538607 -66615275 - L1M3 LINE L1 -463 5720 5652 * 413 431 3 122 chr20 5538627 5538753 -66615129 - AluSx SINE Alu 0 302 163 2081 149 0 0 chr20 5538753 5539061 -66614821 - AluSx SINE Alu 0 312 5 413 431 3 122 chr20 5539061 5539277 -66614605 - AluSx SINE Alu -139 163 1 2210 87 10 7 chr20 5539839 5540127 -66613755 - AluSx SINE Alu -23 289 1 23 0 0 0 chr20 5540685 5540708 -66613174 + AT_rich Low_complexity Low_complexity 1 23 0 278 256 37 12 chr20 5540767 5540849 -66613033 + L2 LINE L2 1365 1448 -1866 893 70 118 0 chr20 5541216 5541371 -66612511 + MER30 DNA MER1_type 1 195 -35 2039 91 91 3 chr20 5541463 5541749 -66612133 + AluY SINE Alu 1 311 0 416 317 53 18 chr20 5542422 5542649 -66611233 - L1ME LINE L1 -511 5659 5425 1163 173 61 78 chr20 5542710 5542751 -66611131 - L1ME LINE L1 -429 5737 5697 1677 184 0 33 chr20 5542751 5543055 -66610827 + AluJo SINE Alu 1 294 -18 1766 167 27 0 chr20 5543065 5543358 -66610524 + AluJb SINE Alu 11 311 -1 1163 173 61 78 chr20 5543358 5543600 -66610282 - L1ME LINE L1 -478 5688 5448 2330 92 3 29 chr20 5543610 5543916 -66609966 - AluSp SINE Alu -15 298 1 1015 128 0 0 chr20 5544117 5544258 -66609624 + AluJb SINE Alu 1 141 -171 2416 90 0 0 chr20 5544926 5545226 -66608656 - AluSx SINE Alu -12 300 1 219 69 0 0 chr20 5545233 5545262 -66608620 + (T)n Simple_repeat Simple_repeat 1 29 0 1375 195 17 31 chr20 5545380 5545672 -66608210 - AluJo SINE Alu -24 288 1 2526 84 3 0 chr20 5545738 5546047 -66607835 + AluSp SINE Alu 1 310 -3 439 223 46 23 chr20 5546061 5546194 -66607688 - MLT1J LTR MaLR -292 158 55 1659 178 7 7 chr20 5547051 5547338 -66606544 - AluJb SINE Alu -25 287 1 378 0 0 0 chr20 5547446 5547488 -66606394 + (TG)n Simple_repeat Simple_repeat 2 43 0 1335 199 27 40 chr20 5547571 5547872 -66606010 - AluJo SINE Alu -11 301 5 2348 98 0 9 chr20 5548116 5548431 -66605451 - AluSx SINE Alu 0 312 1 2055 153 7 0 chr20 5548931 5549239 -66604643 - AluSx SINE Alu -2 310 1 22 56 0 0 chr20 5549486 5549522 -66604360 + AT_rich Low_complexity Low_complexity 1 36 0 2127 124 0 0 chr20 5549522 5549820 -66604062 - AluSc SINE Alu -11 298 1 2228 99 21 0 chr20 5549820 5550103 -66603779 - AluSg SINE Alu -21 289 1 494 293 82 37 chr20 5550330 5550685 -66603197 - HAL1b LINE L1 -774 574 204 2331 110 3 3 chr20 5550714 5551024 -66602858 - AluSx SINE Alu -2 310 1 1115 214 53 29 chr20 5551035 5551316 -66602566 - L1MB7 LINE L1 0 6184 5897 350 298 6 6 chr20 5553066 5553224 -66600658 + (TG)n Simple_repeat Simple_repeat 1 158 0 2268 114 0 7 chr20 5553534 5553842 -66600040 - AluSx SINE Alu -6 306 1 361 204 83 0 chr20 5555174 5555263 -66598619 + MIR SINE MIR 95 191 -60 21 0 0 0 chr20 5555856 5555877 -66598005 + AT_rich Low_complexity Low_complexity 1 21 0 450 296 23 0 chr20 5557122 5557254 -66596628 + MER112 DNA MER1_type 115 249 -11 1602 146 103 0 chr20 5557262 5557552 -66596330 + AluJo SINE Alu 1 317 0 2353 97 0 0 chr20 5558309 5558608 -66595274 + AluSg1 SINE Alu 1 299 -10 622 228 123 78 chr20 5558730 5559143 -66594739 - L1ME3 LINE L1 -59 6103 5672 1886 163 0 23 chr20 5559154 5559460 -66594422 - AluJb SINE Alu -13 299 1 676 162 103 0 chr20 5559784 5559901 -66593981 - FLAM_C SINE Alu -13 130 2 189 0 0 0 chr20 5560450 5560471 -66593411 + (T)n Simple_repeat Simple_repeat 1 21 0 183 196 294 0 chr20 5560504 5560555 -66593327 + MER5B DNA MER1_type 2 67 -111 386 122 0 144 chr20 5561060 5561126 -66592756 - L1MB1 LINE L1 0 6168 6136 1993 129 4 0 chr20 5561126 5561405 -66592477 - AluSx SINE Alu -12 300 21 386 122 0 144 chr20 5561405 5561444 -66592438 - L1MB1 LINE L1 -32 6136 6093 760 171 0 79 chr20 5561451 5561603 -66592279 - AluJo SINE Alu -171 141 2 1199 150 34 49 chr20 5561607 5561677 -66592205 - L1MB1 LINE L1 -68 6100 6030 2201 119 0 0 chr20 5561677 5561971 -66591911 - AluSx SINE Alu -17 295 2 1199 150 34 49 chr20 5561971 5562162 -66591720 - L1MB1 LINE L1 -138 6030 5837 1705 173 14 7 chr20 5562527 5562811 -66591071 - AluJb SINE Alu -26 286 1 369 336 43 26 chr20 5562862 5563094 -66590788 - L1M4 LINE L1 -1539 4607 4372 441 210 134 8 chr20 5563129 5563248 -66590634 - MER58C DNA MER1_type -38 177 44 761 177 39 0 chr20 5563755 5563885 -66589997 - AluJo SINE Alu -176 136 2 2192 69 62 14 chr20 5564221 5564511 -66589371 + AluSp SINE Alu 1 304 -9 1967 134 46 0 chr20 5564531 5564815 -66589067 + AluJb SINE Alu 4 300 -12 307 261 23 0 chr20 5565172 5565260 -66588622 + MIR SINE MIR 52 141 -121 809 141 0 16 chr20 5566259 5566387 -66587495 + FLAM_A SINE Alu 1 126 -7 2514 48 0 26 chr20 5567016 5567329 -66586553 - AluY SINE Alu -6 305 1 2600 69 0 0 chr20 5567634 5567940 -66585942 - AluY SINE Alu -5 306 1 2271 98 3 3 chr20 5567970 5568266 -66585616 - AluSq SINE Alu -17 296 1 962 200 118 0 chr20 5568449 5568644 -66585238 - MER20 DNA MER1_type -1 218 1 1995 114 0 89 chr20 5569198 5569523 -66584359 - AluSx SINE Alu -15 297 2 804 201 106 0 chr20 5569633 5569822 -66584060 - MER3 DNA MER1_type 0 209 1 1788 175 0 38 chr20 5571049 5571369 -66582513 - AluJb SINE Alu -2 310 3 1369 179 0 36 chr20 5571495 5571746 -66582136 - AluJo SINE Alu -24 288 47 228 67 0 0 chr20 5571750 5571780 -66582102 + (T)n Simple_repeat Simple_repeat 1 30 0 36 77 0 0 chr20 5571793 5571871 -66582011 + AT_rich Low_complexity Low_complexity 1 78 0 465 262 87 0 chr20 5571871 5571997 -66581885 - FRAM SINE Alu -31 145 9 2285 97 7 0 chr20 5572019 5572309 -66581573 - AluSx SINE Alu -20 292 1 1865 147 3 46 chr20 5573550 5573876 -66580006 - AluJb SINE Alu 0 312 1 1635 190 0 7 chr20 5574505 5574794 -66579088 + AluJo SINE Alu 1 287 -25 625 221 59 0 chr20 5575595 5575731 -66578151 - MER3 DNA MER1_type 0 209 66 225 65 0 0 chr20 5576314 5576345 -66577537 + (A)n Simple_repeat Simple_repeat 1 31 0 262 279 69 48 chr20 5577316 5577535 -66576347 - L2 LINE L2 0 3272 3042 476 273 106 48 chr20 5577572 5577648 -66576234 - L2 LINE L2 -34 3279 3209 1599 173 34 20 chr20 5577648 5577943 -66575939 - AluJo SINE Alu -13 299 1 476 273 106 48 chr20 5577943 5578177 -66575705 - L2 LINE L2 -104 3209 2951 318 26 0 0 chr20 5579564 5579603 -66574279 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 884 122 0 0 chr20 5579606 5579721 -66574161 - FLAM_C SINE Alu -28 115 1 21 36 0 0 chr20 5579725 5579753 -66574129 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr20 5579982 5580002 -66573880 + (TG)n Simple_repeat Simple_repeat 1 20 0 1981 125 10 17 chr20 5580003 5580300 -66573582 - AluSx SINE Alu -17 295 1 1886 147 32 38 chr20 5581223 5581536 -66572346 - AluJb SINE Alu -1 311 1 1191 280 70 51 chr20 5582148 5582590 -66571292 - L1MC4a LINE L1 -1921 5887 5432 2219 94 0 0 chr20 5582590 5582867 -66571015 - AluSx SINE Alu -35 277 1 1191 280 70 51 chr20 5582867 5582949 -66570933 - L1MC4a LINE L1 -2376 5432 5353 1690 140 142 11 chr20 5585859 5586177 -66567705 - MER47A DNA MER2_type 0 366 4 639 182 84 28 chr20 5586287 5586430 -66567452 - L1MB5 LINE L1 0 6174 6024 2318 113 0 0 chr20 5586869 5587180 -66566702 - AluSx SINE Alu -1 311 1 283 255 172 25 chr20 5587351 5587508 -66566374 - L1ME4a LINE L1 -1 6120 5941 463 295 82 75 chr20 5587759 5587804 -66566078 - L1MC4a LINE L1 -298 5823 5780 1512 157 98 0 chr20 5587804 5588085 -66565797 - AluSx SINE Alu 0 308 3 463 295 82 75 chr20 5588085 5588656 -66565226 - L1MC4a LINE L1 -341 5780 5257 2328 105 0 10 chr20 5588919 5589255 -66564627 + AluSx SINE Alu 1 312 0 318 236 90 28 chr20 5589255 5589390 -66564492 - L1ME4a LINE L1 -387 5734 5588 189 0 0 0 chr20 5590157 5590178 -66563704 + (T)n Simple_repeat Simple_repeat 1 21 0 385 281 168 0 chr20 5590261 5590464 -66563418 + MIR SINE MIR 13 249 -13 1642 171 25 29 chr20 5590703 5591017 -66562865 + AluJo SINE Alu 3 315 0 2053 136 0 16 chr20 5592110 5592418 -66561464 + AluSx SINE Alu 1 303 -9 2074 138 0 13 chr20 5592451 5592755 -66561127 - AluSx SINE Alu -12 300 1 1972 132 10 10 chr20 5592992 5593281 -66560601 + AluSx SINE Alu 3 291 -21 991 146 73 26 chr20 5593490 5593682 -66560200 + MER46A DNA MER2_type 14 214 -22 846 179 72 175 chr20 5593731 5593908 -66559974 - L1MC4 LINE L1 -76 7966 7772 1818 138 10 21 chr20 5593908 5594199 -66559683 - AluSx SINE Alu -24 288 1 846 179 72 175 chr20 5594199 5594552 -66559330 - L1MC4 LINE L1 -270 7772 7491 286 226 71 0 chr20 5594530 5594614 -66559268 - L1ME4a LINE L1 -2371 5437 5348 * 351 257 154 78 chr20 5594883 5595430 -66558452 - L1M2 LINE L1 -1131 2078 1757 276 263 93 57 chr20 5595447 5595641 -66558241 - HAL1 LINE L1 -1688 819 619 1893 106 48 27 chr20 5596199 5596492 -66557390 - AluSx SINE Alu -3 309 11 1483 185 21 11 chr20 5596503 5596790 -66557092 - AluJo SINE Alu -22 290 1 684 273 114 0 chr20 5596933 5597109 -66556773 + MER58A DNA MER1_type 24 219 -5 2064 128 20 0 chr20 5597710 5598008 -66555874 - AluSx SINE Alu -8 304 1 2367 197 108 43 chr20 5598288 5598716 -66555166 - MER77 LTR ERV1 -4 601 126 656 188 8 0 chr20 5598716 5598833 -66555049 - FLAM_C SINE Alu -15 118 1 2367 197 108 43 chr20 5598833 5598968 -66554914 - MER77 LTR ERV1 -479 126 1 1725 162 28 0 chr20 5600542 5600826 -66553056 + AluJb SINE Alu 1 292 -20 335 298 118 32 chr20 5602202 5602548 -66551334 + L1M4 LINE L1 3582 3957 -2189 1626 170 6 19 chr20 5602674 5602991 -66550891 + AluSq SINE Alu 1 313 0 208 139 0 28 chr20 5604194 5604230 -66549652 + (TCTCC)n Simple_repeat Simple_repeat 4 38 0 193 167 185 19 chr20 5607196 5607250 -66546632 + MIR SINE MIR 85 147 -61 195 42 0 0 chr20 5608576 5608600 -66545282 + (TCTCCC)n Simple_repeat Simple_repeat 5 28 0 234 245 115 108 chr20 5609442 5609481 -66544401 - L1MC4 LINE L1 -139 7903 7866 1896 133 3 3 chr20 5609481 5609775 -66544107 + AluJo SINE Alu 1 294 -18 234 245 115 108 chr20 5609775 5610021 -66543861 - L1MC4 LINE L1 -176 7866 7616 1715 89 4 4 chr20 5610359 5610595 -66543287 + AluSq SINE Alu 1 236 -77 234 286 155 43 chr20 5610666 5610792 -66543090 + MIR SINE MIR 24 173 -89 1803 143 0 14 chr20 5610792 5611086 -66542796 + AluJo SINE Alu 1 290 -22 234 286 155 43 chr20 5611086 5611120 -66542762 + MIR SINE MIR 173 202 -60 346 291 42 4 chr20 5611938 5612065 -66541817 - L1ME1 LINE L1 -2 6332 6046 207 0 0 0 chr20 5612097 5612120 -66541762 + (TGGA)n Simple_repeat Simple_repeat 3 25 0 2027 115 3 3 chr20 5612179 5612475 -66541407 - AluSx SINE Alu -16 296 1 234 282 76 46 chr20 5613874 5614005 -66539877 + MER5A DNA MER1_type 33 167 -22 258 339 9 9 chr20 5614087 5614196 -66539686 - L2 LINE L2 -214 3058 2950 780 245 65 0 chr20 5614473 5614673 -66539209 - MER58A DNA MER1_type -11 213 1 420 301 133 10 chr20 5620048 5620244 -66533638 - MIR SINE MIR 0 262 43 306 193 18 0 chr20 5620392 5620449 -66533433 - U13 snRNA snRNA -28 76 19 2194 96 7 0 chr20 5620458 5620751 -66533131 - AluSx SINE Alu -17 295 1 419 303 168 32 chr20 5621419 5621974 -66531908 + L2 LINE L2 2087 2716 -598 473 280 122 19 chr20 5621987 5622355 -66531527 - HAL1 LINE L1 -1054 1453 1048 281 252 59 42 chr20 5622355 5622474 -66531408 + L2 LINE L2 3151 3271 -1 839 152 0 33 chr20 5623140 5623291 -66530591 - FRAM SINE Alu -10 166 21 2225 91 3 7 chr20 5623412 5623721 -66530161 - AluSq SINE Alu -5 308 1 328 304 6 88 chr20 5623757 5623928 -66529954 + L1M4 LINE L1 4031 4187 -1959 482 288 183 38 chr20 5623959 5624358 -66529524 + L1M4 LINE L1 4736 5192 -954 1881 145 3 0 chr20 5624367 5624650 -66529232 + AluSx SINE Alu 8 291 -21 248 154 0 39 chr20 5625053 5625105 -66528777 - L1MC5 LINE L1 -48 7913 7864 327 269 103 77 chr20 5625326 5625560 -66528322 - L1MC4a LINE L1 -1879 5929 5690 225 0 0 0 chr20 5625654 5625679 -66528203 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1290 20 0 0 chr20 5625680 5625826 -66528056 - L1PA5 LINE L1 -9 6145 6000 233 175 48 79 chr20 5626055 5626181 -66527701 + L1ME4a LINE L1 5982 6103 -18 267 301 237 3 chr20 5627327 5627542 -66526340 + MIR SINE MIR 5 262 0 348 318 98 28 chr20 5627583 5627838 -66526044 - L1ME4a LINE L1 -2 6119 5847 2026 93 10 3 chr20 5629791 5630081 -66523801 + AluSx SINE Alu 1 292 -20 299 143 0 0 chr20 5630696 5630738 -66523144 + MER20 DNA MER1_type 178 219 0 2363 85 0 0 chr20 5632242 5632549 -66521333 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 5633285 5633305 -66520577 + (TG)n Simple_repeat Simple_repeat 2 21 0 183 42 0 0 chr20 5633358 5633382 -66520500 + (GA)n Simple_repeat Simple_repeat 2 25 0 946 207 0 22 chr20 5633514 5633693 -66520189 - FAM SINE Alu 0 175 1 419 244 128 55 chr20 5634420 5634472 -66519410 - MER5A DNA MER1_type -2 187 140 2107 90 30 3 chr20 5634472 5634773 -66519109 + AluSx SINE Alu 1 309 -3 419 244 128 55 chr20 5634773 5634884 -66518998 - MER5A DNA MER1_type -49 140 12 207 0 0 0 chr20 5635197 5635220 -66518662 + (T)n Simple_repeat Simple_repeat 1 23 0 617 264 245 23 chr20 5635292 5635895 -66517987 - L2 LINE L2 0 3313 2596 1261 135 61 156 chr20 5636492 5636713 -66517169 - MER2 DNA MER2_type -1 343 171 2088 122 0 0 chr20 5636713 5637017 -66516865 + AluSx SINE Alu 1 304 -8 1261 135 61 156 chr20 5637017 5637174 -66516708 - MER2 DNA MER2_type -173 171 1 344 182 26 39 chr20 5637369 5637446 -66516436 + L2 LINE L2 3238 3313 0 255 183 56 14 chr20 5637975 5638046 -66515836 + L2 LINE L2 2905 2978 -335 451 260 0 0 chr20 5638538 5638642 -66515240 + MER3 DNA MER1_type 70 126 -83 264 295 150 20 chr20 5639285 5639485 -66514397 - MIR SINE MIR -24 238 13 2353 142 59 29 chr20 5641473 5641794 -66512088 - L1MB5 LINE L1 -13 6161 5822 2139 99 0 14 chr20 5641794 5642087 -66511795 - AluSx SINE Alu -23 289 1 2353 142 59 29 chr20 5642087 5642209 -66511673 - L1MB5 LINE L1 -352 5822 5705 384 233 78 0 chr20 5642217 5642307 -66511575 + MER82 DNA MER2_type 1 97 -556 * 1393 249 119 0 chr20 5642303 5642673 -66511209 + MER82 DNA MER2_type 228 641 -12 1162 174 10 0 chr20 5642685 5642881 -66511001 - L1MB5 LINE L1 -495 5679 5482 21 36 0 0 chr20 5643125 5643153 -66510729 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 5643581 5643603 -66510279 + AT_rich Low_complexity Low_complexity 1 22 0 1991 134 0 0 chr20 5644865 5645197 -66508685 - AluSx SINE Alu 0 332 1 510 17 0 0 chr20 5645509 5645568 -66508314 + (TG)n Simple_repeat Simple_repeat 2 60 0 234 0 0 0 chr20 5648429 5648455 -66505427 + (CA)n Simple_repeat Simple_repeat 2 27 0 952 150 105 163 chr20 5650535 5650631 -66503251 + MER2 DNA MER2_type 2 102 -242 1454 172 17 43 chr20 5650631 5650933 -66502949 + AluJo SINE Alu 1 294 -18 952 150 105 163 chr20 5650933 5651197 -66502685 + MER2 DNA MER2_type 102 341 -3 1337 98 112 0 chr20 5651685 5651783 -66502099 - MER30 DNA MER1_type 0 230 144 2101 117 7 3 chr20 5651783 5652090 -66501792 - AluSq SINE Alu -5 308 1 1337 98 112 0 chr20 5652090 5652196 -66501686 - MER30 DNA MER1_type -86 144 3 2303 42 0 3 chr20 5652482 5652786 -66501096 + AluY SINE Alu 1 303 0 308 239 101 55 chr20 5653061 5653170 -66500712 + HAL1 LINE L1 1403 1516 -991 231 231 0 0 chr20 5653170 5653222 -66500660 + L1MDa LINE L1 1846 1897 -4643 461 200 252 26 chr20 5653567 5653713 -66500169 + MER5C DNA MER1_type 11 123 -201 1604 159 9 62 chr20 5653713 5654034 -66499848 - AluJb SINE Alu -4 308 5 461 200 252 26 chr20 5654034 5654117 -66499765 + MER5C DNA MER1_type 123 292 -32 1085 175 0 0 chr20 5654118 5654307 -66499575 + AluJb SINE Alu 113 301 -11 1032 124 164 45 chr20 5654307 5654341 -66499541 + Tigger3(Golem) DNA MER2_type 2814 2843 -195 2138 101 8 62 chr20 5654341 5654697 -66499185 - MER1B DNA MER1_type 0 337 1 1032 124 164 45 chr20 5654697 5654863 -66499019 + Tigger3(Golem) DNA MER2_type 2843 3038 0 1297 120 12 100 chr20 5654875 5655134 -66498748 + MER46A DNA MER2_type 1 236 0 622 274 88 86 chr20 5656031 5656309 -66497573 - L1MC4a LINE L1 -1903 5905 5629 2364 90 0 0 chr20 5656309 5656619 -66497263 - AluSx SINE Alu -2 310 1 622 274 88 86 chr20 5656619 5656930 -66496952 - L1MC4a LINE L1 -2179 5629 5312 806 63 9 18 chr20 5656930 5657041 -66496841 - L1PA11 LINE L1 -1 6173 6064 622 274 88 86 chr20 5657041 5657099 -66496783 - L1MC4a LINE L1 -2496 5312 5256 306 182 121 30 chr20 5657197 5657263 -66496619 + L1M4 LINE L1 5215 5286 -860 1375 147 5 0 chr20 5657501 5657712 -66496170 - AluJb SINE Alu -93 219 8 318 115 0 0 chr20 5657965 5658017 -66495865 + (TCCCC)n Simple_repeat Simple_repeat 3 54 0 486 33 0 0 chr20 5658017 5658077 -66495805 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 1604 168 7 21 chr20 5658077 5658368 -66495514 - AluJb SINE Alu -25 287 1 27 0 0 0 chr20 5658515 5658542 -66495340 + AT_rich Low_complexity Low_complexity 1 27 0 1881 135 44 3 chr20 5658704 5659000 -66494882 + AluSx SINE Alu 1 308 -4 264 333 0 0 chr20 5659063 5659159 -66494723 + L1MC4 LINE L1 7791 7886 -156 * 620 174 0 7 chr20 5659150 5659279 -66494603 + L1M4 LINE L1 4731 4854 -1292 378 200 0 0 chr20 5659280 5659345 -66494537 - AluSc SINE Alu -3 296 232 1606 169 14 7 chr20 5659827 5660111 -66493771 - AluJb SINE Alu -26 286 1 494 328 53 32 chr20 5660162 5660409 -66493473 - L1MC4a LINE L1 -1539 4607 4356 452 202 134 8 chr20 5660429 5660548 -66493334 - MER58C DNA MER1_type -38 177 44 180 321 64 64 chr20 5660877 5661017 -66492865 - L2 LINE L2 0 3272 3133 765 177 39 0 chr20 5661055 5661185 -66492697 - AluJo SINE Alu -176 136 2 2066 69 62 14 chr20 5661521 5661811 -66492071 + AluSp SINE Alu 1 304 -9 1845 134 46 0 chr20 5661831 5662115 -66491767 + AluJb SINE Alu 4 300 -12 378 288 52 57 chr20 5662472 5662684 -66491198 + MIR SINE MIR 52 262 0 817 141 0 16 chr20 5663559 5663687 -66490195 + FLAM_A SINE Alu 1 126 -7 2407 58 0 13 chr20 5664316 5664629 -66489253 - AluY SINE Alu -2 309 1 345 316 53 8 chr20 5664789 5664922 -66488960 - HAL1 LINE L1 -909 1598 1460 2450 72 0 0 chr20 5664934 5665240 -66488642 - AluY SINE Alu -5 306 1 2119 101 3 7 chr20 5665270 5665567 -66488315 - AluSq SINE Alu -17 296 1 967 200 118 0 chr20 5665750 5665945 -66487937 - MER20 DNA MER1_type -1 218 1 1873 114 0 86 chr20 5666499 5666823 -66487059 - AluSx SINE Alu -15 297 2 778 206 106 0 chr20 5666934 5667123 -66486759 - MER3 DNA MER1_type 0 209 1 1677 175 0 38 chr20 5668350 5668670 -66485212 - AluJb SINE Alu -2 310 3 1145 180 8 40 chr20 5668796 5669046 -66484836 - AluJo SINE Alu -24 288 47 46 83 0 0 chr20 5669053 5669162 -66484720 + AT_rich Low_complexity Low_complexity 1 109 0 468 262 87 0 chr20 5669162 5669288 -66484594 - FRAM SINE Alu -31 145 9 2074 94 14 0 chr20 5669310 5669598 -66484284 - AluSx SINE Alu -20 292 1 548 152 0 48 chr20 5669599 5669704 -66484178 + MER58C DNA MER1_type 108 207 -8 2290 57 7 0 chr20 5670234 5670590 -66483292 - AluSp SINE Alu 0 358 1 736 168 23 15 chr20 5670613 5670744 -66483138 - FLAM_C SINE Alu -1 132 1 2381 21 0 3 chr20 5671884 5672206 -66481676 - AluY SINE Alu 0 321 1 560 119 0 24 chr20 5672318 5672402 -66481480 - MER4A LTR ERV1 0 664 583 855 208 23 12 chr20 5672413 5672586 -66481296 + AluJb SINE Alu 134 308 -4 892 147 12 18 chr20 5672933 5672949 -66480933 + MER5A DNA MER1_type 1 15 -174 390 259 41 41 chr20 5672949 5673119 -66480763 - MER5A DNA MER1_type -2 187 18 335 211 0 0 chr20 5673170 5673238 -66480644 + MER5A DNA MER1_type 32 97 -81 569 204 309 0 chr20 5675471 5675633 -66478249 + MIR SINE MIR 13 224 -38 2079 67 57 3 chr20 5675639 5675921 -66477961 + AluY SINE Alu 1 297 -14 2076 77 0 0 chr20 5676710 5676994 -66476888 + AluSg SINE Alu 21 304 0 1355 139 132 26 chr20 5677321 5677587 -66476295 + AluJb SINE Alu 1 294 -18 1904 137 3 3 chr20 5680306 5680606 -66473276 - AluSx SINE Alu -12 300 1 246 221 177 44 chr20 5680859 5680972 -66472910 + MIR SINE MIR 81 208 -54 336 209 136 27 chr20 5681143 5681253 -66472629 + MARNA DNA Mariner 296 417 -169 3262 94 24 2 chr20 5681501 5681957 -66471925 - MER41A LTR ERV1 -88 466 1 3720 91 55 2 chr20 5681957 5682497 -66471385 - MER41A-int LTR ERV1 -2 6093 5394 669 81 23 0 chr20 5682479 5682565 -66471317 - MER41B-int LTR ERV1 -5858 88 1 * 952 150 0 0 chr20 5682565 5682718 -66471164 - MER41B LTR ERV1 0 635 483 1013 161 16 27 chr20 5682719 5682792 -66471090 - MER58A DNA MER1_type -2203 217 145 1621 152 35 90 chr20 5682792 5683160 -66470722 - MER7A DNA MER2_type 0 346 1 1013 161 16 27 chr20 5683160 5683272 -66470610 - MER58A DNA MER1_type -2275 145 34 827 217 33 5 chr20 5684400 5684584 -66469298 - MER5A DNA MER1_type 0 189 1 326 265 74 48 chr20 5684590 5685017 -66468865 + L1M4 LINE L1 3313 3846 -2300 1823 107 26 23 chr20 5685061 5685369 -66468513 + AluSg SINE Alu 1 309 -1 250 297 0 31 chr20 5685596 5685724 -66468158 + HAL1 LINE L1 2301 2424 -83 196 313 78 16 chr20 5685818 5685882 -66468000 - L2 LINE L2 -1 3271 3204 1517 195 0 13 chr20 5686323 5686626 -66467256 + AluJo SINE Alu 1 299 -13 5044 170 81 53 chr20 5688220 5688783 -66465099 + Charlie1a DNA MER1_type 1 547 -2214 1912 107 36 32 chr20 5688783 5689092 -66464790 + AluSx SINE Alu 1 310 -2 5044 170 81 53 chr20 5689092 5689240 -66464642 + Charlie1a DNA MER1_type 547 689 -2072 234 0 0 0 chr20 5689240 5689266 -66464616 + (TG)n Simple_repeat Simple_repeat 2 27 0 5044 170 81 53 chr20 5689266 5689738 -66464144 + Charlie1a DNA MER1_type 689 1218 -237 2087 144 101 36 chr20 5689786 5690202 -66463680 - MSTB2 LTR MaLR 0 457 15 716 162 17 8 chr20 5690603 5690720 -66463162 + FLAM_C SINE Alu 1 118 -15 509 183 50 0 chr20 5696054 5696174 -66457708 - MIR SINE MIR -21 241 116 575 190 8 0 chr20 5696279 5696400 -66457482 + MIR SINE MIR 141 262 0 22 0 0 0 chr20 5698316 5698338 -66455544 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr20 5698418 5698448 -66455434 + (T)n Simple_repeat Simple_repeat 1 30 0 204 348 140 6 chr20 5699568 5699746 -66454136 + L2 LINE L2 2493 2694 -620 7688 19 0 0 chr20 5700597 5701695 -66452187 - L1PA4 LINE L1 0 6155 5047 11876 27 4 0 chr20 5701695 5703076 -66450806 + L1PA4 LINE L1 3675 5060 -1086 2272 95 0 7 chr20 5703078 5703372 -66450510 - AluSx SINE Alu -12 300 9 1106 252 151 44 chr20 5703382 5703946 -66449936 - L2 LINE L2 -9 3304 2802 477 47 0 0 chr20 5703946 5704010 -66449872 + (CA)n Simple_repeat Simple_repeat 2 65 0 1106 252 151 44 chr20 5704010 5704397 -66449485 - L2 LINE L2 -511 2802 2174 758 209 22 44 chr20 5705144 5705326 -66448556 + MER5B DNA MER1_type 1 178 0 2341 94 0 3 chr20 5705552 5705851 -66448031 - AluSx SINE Alu -14 298 1 192 309 43 52 chr20 5705854 5706064 -66447818 - L3 LINE CR1 -257 1320 1113 907 162 81 0 chr20 5706347 5706587 -66447295 - L1MC4 LINE L1 0 8042 7683 236 302 105 0 chr20 5706823 5706909 -66446973 + MIR SINE MIR 56 150 -112 816 203 4 84 chr20 5707331 5707568 -66446314 + MIR SINE MIR 45 262 0 1906 160 24 0 chr20 5707628 5707921 -66445961 - AluSx SINE Alu -12 300 1 809 192 28 84 chr20 5708120 5708406 -66445476 + L1MC5 LINE L1 6810 7079 -882 747 181 0 0 chr20 5708449 5708565 -66445317 - FLAM_C SINE Alu -23 120 5 826 165 86 58 chr20 5708569 5708812 -66445070 + L1M4 LINE L1 4897 5146 -1000 282 363 25 0 chr20 5709531 5709688 -66444194 - MIR SINE MIR -11 251 91 3195 224 16 0 chr20 5710142 5710853 -66443029 + L1 LINE L1 3899 4620 -1526 1032 160 0 17 chr20 5710866 5711041 -66442841 - FRAM SINE Alu -7 169 1 2457 185 25 53 chr20 5711043 5711410 -66442472 + L1 LINE L1 4607 4983 -1163 2048 145 0 3 chr20 5711410 5711707 -66442175 - AluSx SINE Alu -16 296 1 2457 185 25 53 chr20 5711707 5711881 -66442001 + L1 LINE L1 4983 5134 -1012 2346 110 0 0 chr20 5711881 5712189 -66441693 + AluSx SINE Alu 1 308 -4 2457 185 25 53 chr20 5712189 5712214 -66441668 + L1 LINE L1 5134 5158 -988 418 282 18 0 chr20 5712244 5712354 -66441528 - LTR16C LTR ERVL -235 256 145 942 151 33 160 chr20 5712443 5712719 -66441163 + MER33 DNA MER1_type 1 215 -2370 1572 171 13 49 chr20 5712719 5713023 -66440859 - AluJb SINE Alu -19 293 1 942 151 33 160 chr20 5713023 5713113 -66440769 + MER33 DNA MER1_type 215 315 -9 1162 271 73 40 chr20 5713837 5714261 -66439621 - MLT1J LTR MaLR -73 438 1 1800 92 24 4 chr20 5714452 5714703 -66439179 + L1PA10 LINE L1 5908 6163 -5 402 21 0 0 chr20 5714722 5714769 -66439113 + (TG)n Simple_repeat Simple_repeat 1 47 0 419 265 84 63 chr20 5716427 5716629 -66437253 - L2 LINE L2 -648 2666 2457 2124 131 0 16 chr20 5716629 5716934 -66436948 + AluSx SINE Alu 1 300 -12 419 265 84 63 chr20 5716934 5716969 -66436913 - L2 LINE L2 -857 2457 2424 474 276 70 37 chr20 5717444 5717557 -66436325 - LTR16C LTR ERVL -26 465 357 1753 146 41 0 chr20 5717557 5717825 -66436057 + AluJo SINE Alu 1 279 -33 474 276 70 37 chr20 5717825 5718107 -66435775 - LTR16C LTR ERVL -134 357 1 2044 128 0 50 chr20 5718228 5718547 -66435335 - AluSx SINE Alu -9 303 1 456 62 0 0 chr20 5718563 5718627 -66435255 + (TA)n Simple_repeat Simple_repeat 2 65 0 2541 128 32 5 chr20 5719416 5719816 -66434066 - MSTB LTR MaLR -15 411 1 785 299 126 24 chr20 5720077 5720763 -66433119 + L2 LINE L2 2555 3308 -5 210 280 84 56 chr20 5720861 5721004 -66432878 + MIR3 SINE MIR 48 194 -14 1106 249 127 28 chr20 5721142 5721575 -66432307 + LTR16C LTR ERVL 1 476 -15 2997 107 9 12 chr20 5722754 5723183 -66430699 + MSTC LTR MaLR 1 428 0 2624 65 0 0 chr20 5723538 5723848 -66430034 - AluY SINE Alu -1 310 1 1386 229 91 21 chr20 5724945 5725365 -66428517 + LTR16A1 LTR ERVL 8 456 -1 2222 125 0 10 chr20 5725519 5725823 -66428059 - AluSx SINE Alu -10 302 2 2276 170 62 5 chr20 5726142 5726577 -66427305 + MLT1C LTR MaLR 6 465 -2 320 64 21 0 chr20 5726829 5726876 -66427006 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 4073 42 16 8 chr20 5726902 5727403 -66426479 - L1PA6 LINE L1 -11 6143 5639 400 278 26 0 chr20 5727911 5728026 -66425856 - Charlie7 DNA MER1_type -1922 690 573 2437 78 0 0 chr20 5728255 5728551 -66425331 + AluY SINE Alu 1 296 -15 2112 128 0 0 chr20 5729139 5729436 -66424446 - AluJb SINE Alu -15 297 1 1935 243 96 98 chr20 5729522 5730153 -66423729 + Charlie7 DNA MER1_type 125 753 -1859 2216 140 0 0 chr20 5730153 5730461 -66423421 + AluSx SINE Alu 1 308 -4 1935 243 96 98 chr20 5730461 5730968 -66422914 + Charlie7 DNA MER1_type 753 1260 -1352 226 222 0 0 chr20 5731189 5731234 -66422648 + Charlie7 DNA MER1_type 1377 1421 -1191 587 106 24 0 chr20 5731235 5731320 -66422562 + MER21B LTR ERV1 329 415 -448 210 71 0 0 chr20 5731360 5731388 -66422494 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 569 212 152 24 chr20 5731426 5731591 -66422291 + Charlie7 DNA MER1_type 1503 1688 -924 321 238 42 49 chr20 5732048 5732191 -66421691 + L1MC5 LINE L1 7540 7681 -280 1189 182 153 10 chr20 5732197 5732482 -66421400 + MLT1A1 LTR MaLR 1 333 -32 791 195 7 7 chr20 5732482 5732636 -66421246 - FRAM SINE Alu -22 154 1 247 294 28 51 chr20 5732676 5732931 -66420951 + L1MC4 LINE L1 7794 8042 0 379 250 153 20 chr20 5732952 5733148 -66420734 + Charlie7 DNA MER1_type 1713 1934 -678 3537 197 43 7 chr20 5733149 5733966 -66419916 + L1MB2 LINE L1 4342 5187 -959 1210 196 141 4 chr20 5733969 5734224 -66419658 + AluJo SINE Alu 2 291 -11 369 185 80 8 chr20 5734227 5734338 -66419544 + Alu SINE Alu 234 297 -5 5030 145 32 23 chr20 5734348 5734956 -66418926 + L1MB2 LINE L1 5166 5791 -380 184 57 29 29 chr20 5734956 5734991 -66418891 + (TA)n Simple_repeat Simple_repeat 1 35 0 5030 145 32 23 chr20 5734991 5735375 -66418507 + L1MB2 LINE L1 5791 6170 -1 884 224 114 59 chr20 5735389 5735897 -66417985 + Charlie7 DNA MER1_type 1927 2462 -150 207 0 0 0 chr20 5736066 5736089 -66417793 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 1120 176 35 0 chr20 5736163 5736362 -66417520 + MER3 DNA MER1_type 2 207 -2 588 40 0 0 chr20 5736883 5736958 -66416924 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 32612 110 12 52 chr20 5736958 5743355 -66410527 - L1PA7 LINE L1 -12 6142 12 1701 95 32 4 chr20 5743597 5743849 -66410033 + L1MA2 LINE L1 6006 6264 -40 3784 66 10 0 chr20 5743849 5744330 -66409552 + L1PA6 LINE L1 5663 6153 -1 331 167 0 0 chr20 5744963 5745023 -66408859 + L1MA3 LINE L1 6246 6305 0 618 269 8 61 chr20 5745773 5746037 -66407845 + L1M4 LINE L1 4442 4691 -1455 259 276 0 0 chr20 5746097 5746155 -66407727 - L2 LINE L2 0 3313 3256 1160 155 5 15 chr20 5746200 5746400 -66407482 - L1PB2 LINE L1 -3 6148 5951 182 279 162 0 chr20 5746452 5746520 -66407362 + MIR SINE MIR 66 144 -118 15161 171 24 10 chr20 5746660 5752278 -66401604 - L1PB2 LINE L1 -175 6692 998 360 111 0 0 chr20 5752278 5752332 -66401550 + (T)n Simple_repeat Simple_repeat 1 54 0 3530 222 21 12 chr20 5752361 5753225 -66400657 - L1M4c LINE L1 -3263 4302 3328 1931 149 3 34 chr20 5753225 5753547 -66400335 - AluSx SINE Alu 0 312 1 3530 222 21 12 chr20 5753547 5753974 -66399908 - L1M4c LINE L1 -4237 3328 2906 1509 195 22 11 chr20 5753974 5754251 -66399631 - AluJo SINE Alu -2 310 31 605 350 5 9 chr20 5754251 5754465 -66399417 - L1M4c LINE L1 -5742 1744 1532 * 963 186 9 27 chr20 5754453 5754673 -66399209 - L1 LINE L1 -2567 3579 3364 * 2545 160 44 48 chr20 5754671 5755196 -66398686 + L1MA9 LINE L1 5768 6290 -22 180 0 0 0 chr20 5755204 5755224 -66398658 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 6691 185 58 51 chr20 5755226 5755977 -66397905 + L1MD1 LINE L1 14 758 -5782 2017 123 0 27 chr20 5755977 5756277 -66397605 + AluSx SINE Alu 1 292 -20 6691 185 58 51 chr20 5756277 5757609 -66396273 + L1MD1 LINE L1 758 2453 -4087 3372 241 43 18 chr20 5757604 5757696 -66396186 + L1MD1 LINE L1 4158 4246 -2294 * 737 238 0 0 chr20 5757696 5757822 -66396060 + FLAM_A SINE Alu 1 126 -7 3372 241 43 18 chr20 5757822 5758678 -66395204 + L1MD1 LINE L1 4246 5130 -1410 1798 166 31 17 chr20 5758680 5759029 -66394853 - MLT1A1 LTR MaLR 0 365 12 2262 197 44 49 chr20 5759041 5760125 -66393757 + L1MD1 LINE L1 5129 6214 -422 5405 66 19 9 chr20 5760131 5760814 -66393068 + L1PA10 LINE L1 5479 6168 0 2491 151 44 2 chr20 5760814 5761223 -66392659 + L1MD1 LINE L1 6208 6636 0 2061 109 3 3 chr20 5761231 5761545 -66392337 + AluSx SINE Alu 1 314 0 2123 102 0 23 chr20 5761638 5761941 -66391941 - AluSc SINE Alu -12 297 2 451 270 65 99 chr20 5762103 5762820 -66391062 + L1MC4a LINE L1 5255 5931 -231 3144 133 44 11 chr20 5763637 5764179 -66389703 + L1MC1 LINE L1 5383 5942 -391 1073 210 58 0 chr20 5764177 5764401 -66389481 - L1ME LINE L1 -540 5624 5388 * 565 189 217 0 chr20 5764928 5765071 -66388811 - MER5A DNA MER1_type -7 182 9 2486 129 65 8 chr20 5765252 5765654 -66388228 - MSTB1 LTR MaLR 0 432 8 318 231 17 0 chr20 5765780 5765871 -66388011 + L1ME LINE L1 5750 5817 -304 1227 259 171 23 chr20 5766452 5766880 -66387002 + LTR16C LTR ERVL 1 491 0 917 240 132 12 chr20 5767179 5767467 -66386415 - HAL1 LINE L1 -2114 393 58 2080 144 0 3 chr20 5767467 5767766 -66386116 + AluSx SINE Alu 1 298 -14 917 240 132 12 chr20 5767766 5767810 -66386072 - HAL1 LINE L1 -2449 58 21 502 265 27 27 chr20 5767913 5768060 -66385822 - MER5A DNA MER1_type -3 186 40 464 354 91 30 chr20 5768175 5768537 -66385345 - L3 LINE CR1 -174 1403 1020 1837 163 35 0 chr20 5769925 5770214 -66383668 - AluJo SINE Alu -13 299 1 231 36 0 0 chr20 5770735 5770763 -66383119 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 1490 111 0 5 chr20 5771024 5771231 -66382651 - AluY SINE Alu -105 206 1 188 283 120 22 chr20 5771438 5771530 -66382352 + MIR SINE MIR 30 130 -78 342 0 0 0 chr20 5771648 5771686 -66382196 + (TC)n Simple_repeat Simple_repeat 2 39 0 2059 83 4 0 chr20 5772355 5772634 -66381248 + AluSp SINE Alu 32 311 0 1477 212 33 44 chr20 5772723 5773086 -66380796 - MLT1A1 LTR MaLR -6 359 1 614 211 68 84 chr20 5773315 5773552 -66380330 + LTR16A1 LTR ERVL 205 437 -20 1486 225 15 0 chr20 5773863 5774187 -66379695 - L1MA9 LINE L1 -34 6278 5950 693 204 0 0 chr20 5774197 5774329 -66379553 + MIR SINE MIR 59 190 -72 506 261 86 39 chr20 5775260 5775701 -66378181 + LTR33 LTR ERVL 14 521 0 207 0 0 0 chr20 5776767 5776790 -66377092 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 419 288 0 14 chr20 5776895 5777034 -66376848 - L1M4 LINE L1 -1300 4846 4710 343 333 63 8 chr20 5777079 5777331 -66376551 - L1M4 LINE L1 -1819 4327 4062 8493 31 0 1 chr20 5777375 5779100 -66374782 - L1PA3 LINE L1 0 6155 4431 10768 26 0 0 chr20 5779100 5780370 -66373512 + L1P LINE L1 2693 3962 -2184 274 155 0 28 chr20 5780655 5780726 -66373156 + CT-rich Low_complexity Low_complexity 1 69 0 3524 195 19 2 chr20 5781440 5782075 -66371807 + MER82 DNA MER2_type 1 646 -7 948 106 8 0 chr20 5783168 5783300 -66370582 - MLT1D LTR MaLR 0 505 373 15922 195 30 14 chr20 5783307 5787114 -66366768 + L1PB1 LINE L1 6 4134 -2733 2071 95 0 0 chr20 5787114 5787387 -66366495 + AluY SINE Alu 39 311 0 15922 195 30 14 chr20 5787387 5790162 -66363720 + L1PB1 LINE L1 4134 6863 -4 530 211 261 0 chr20 5790224 5790366 -66363516 - MLT1D LTR MaLR -118 387 209 189 0 0 0 chr20 5790392 5790413 -66363469 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 733 214 0 0 chr20 5790419 5790536 -66363346 - FLAM_C SINE Alu -25 118 2 1133 174 18 28 chr20 5790555 5790773 -66363109 - MLT1D LTR MaLR -289 216 1 1894 141 28 0 chr20 5791064 5791347 -66362535 + AluJb SINE Alu 14 304 -8 1978 141 8 57 chr20 5791348 5791716 -66362166 + L1MA8 LINE L1 5942 6291 0 198 289 14 41 chr20 5792120 5792269 -66361613 - L3 LINE CR1 -885 692 473 23 0 0 0 chr20 5793444 5793467 -66360415 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr20 5794337 5794390 -66359492 + AT_rich Low_complexity Low_complexity 1 53 0 481 255 145 30 chr20 5796211 5796411 -66357471 - MIR SINE MIR -3 259 37 1416 196 45 17 chr20 5797315 5797606 -66356276 - AluJo SINE Alu -9 303 5 2094 123 0 0 chr20 5798090 5798383 -66355499 + AluSx SINE Alu 1 293 -19 1059 144 57 6 chr20 5798511 5798900 -66354982 + LTR64 LTR ERVK 1 552 -6 189 398 48 0 chr20 5799429 5799512 -66354370 + MIR SINE MIR 58 144 -118 426 85 0 0 chr20 5799562 5799621 -66354261 + (TG)n Simple_repeat Simple_repeat 1 59 0 27 29 0 0 chr20 5800632 5800666 -66353216 + AT_rich Low_complexity Low_complexity 1 34 0 1881 139 10 7 chr20 5800807 5801108 -66352774 - AluSx SINE Alu -10 302 1 228 167 0 21 chr20 5801191 5801239 -66352643 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 243 293 116 102 chr20 5801761 5801908 -66351974 - MIR SINE MIR -81 181 33 194 0 39 0 chr20 5802389 5802415 -66351467 + (TTG)n Simple_repeat Simple_repeat 2 28 0 1969 128 7 0 chr20 5802417 5802715 -66351167 - AluSx SINE Alu -12 300 1 536 314 80 29 chr20 5804095 5804334 -66349548 + MIR SINE MIR 12 262 0 205 250 167 42 chr20 5804568 5804664 -66349218 - MIR SINE MIR -79 129 22 254 98 0 24 chr20 5805027 5805068 -66348814 + MER9 LTR ERVK 1 40 -471 20223 64 21 18 chr20 5805068 5805702 -66348180 + HERVK9 LTR ERVK 138 769 -5147 184 228 0 88 chr20 5805702 5805759 -66348123 + MER5B DNA MER1_type 58 109 -69 20223 64 21 18 chr20 5805759 5807710 -66346172 + HERVK9 LTR ERVK 769 2786 -3130 1921 48 0 0 chr20 5807710 5807941 -66345941 + HERVK9 LTR ERVK 3711 3941 -1975 * 7982 94 2 3 chr20 5807940 5808994 -66344888 + HERVK9 LTR ERVK 4582 5634 -282 2261 90 35 4 chr20 5809035 5809364 -66344518 + HERVK9 LTR ERVK 4922 5916 0 3731 77 8 49 chr20 5809364 5809897 -66343985 + MER9 LTR ERVK 1 511 0 1939 187 49 55 chr20 5810392 5810900 -66342982 - MLT1D LTR MaLR 0 505 1 388 242 50 115 chr20 5811121 5811303 -66342579 + MIR3 SINE MIR 18 187 -21 323 242 24 23 chr20 5811844 5812020 -66341862 + LTR16C LTR ERVL 240 490 -1 3650 65 0 0 chr20 5812736 5813180 -66340702 + MLT2A1 LTR ERVL 1 444 0 408 256 33 16 chr20 5813181 5813302 -66340580 - MER5A DNA MER1_type -7 182 60 2267 81 0 0 chr20 5813304 5813589 -66340293 - AluSq SINE Alu -26 287 3 1501 97 8 24 chr20 5814101 5814349 -66339533 + L1MA5 LINE L1 6055 6298 -2 595 217 67 27 chr20 5814544 5814731 -66339151 + L1ME3 LINE L1 5883 6074 -88 185 273 73 0 chr20 5816207 5816262 -66337620 + MIR SINE MIR 81 139 -123 268 299 0 0 chr20 5816266 5816333 -66337549 + L2 LINE L2 3245 3311 -2 567 70 40 60 chr20 5817607 5817707 -66336175 - L1M3 LINE L1 -509 5674 5577 314 130 234 13 chr20 5817719 5817796 -66336086 + Charlie1 DNA MER1_type 2620 2713 -48 270 189 38 0 chr20 5817895 5817948 -66335934 - MER94 DNA DNA -79 55 1 1771 181 3 0 chr20 5819366 5819670 -66334212 - AluJb SINE Alu -3 309 5 1784 244 98 7 chr20 5820296 5820743 -66333139 - MLT1J LTR MaLR -18 493 6 692 177 46 0 chr20 5821124 5821254 -66332628 - FLAM_C SINE Alu -6 137 2 556 191 157 0 chr20 5821279 5821394 -66332488 - FLAM_A SINE Alu 0 133 1 588 119 0 40 chr20 5821494 5821595 -66332287 - AluSg/x SINE Alu 0 312 216 205 219 109 47 chr20 5821770 5821834 -66332048 - MIR SINE MIR -99 109 42 782 112 0 40 chr20 5822546 5822671 -66331211 - AluJb SINE Alu -1 311 192 236 299 89 0 chr20 5822760 5822917 -66330965 - L1ME LINE L1 -671 5450 5280 887 143 0 0 chr20 5823127 5823253 -66330629 - FLAM_C SINE Alu -7 126 1 2078 113 7 0 chr20 5823264 5823566 -66330316 - AluSq SINE Alu -9 304 1 266 204 57 23 chr20 5823566 5823654 -66330228 - L1 LINE L1 -1102 5044 4954 204 286 32 16 chr20 5823902 5823965 -66329917 - MIR3 SINE MIR -142 66 3 751 189 8 0 chr20 5825034 5825161 -66328721 + FLAM_A SINE Alu 4 131 -2 734 172 8 0 chr20 5825166 5825288 -66328594 - FLAM_C SINE Alu -19 124 2 2334 96 3 0 chr20 5825303 5825615 -66328267 - AluSp SINE Alu 0 313 1 186 71 0 0 chr20 5825632 5825660 -66328222 + (A)n Simple_repeat Simple_repeat 1 28 0 2123 99 0 3 chr20 5826011 5826294 -66327588 + AluSx SINE Alu 1 282 -30 412 261 43 43 chr20 5826645 5826806 -66327076 + MER112 DNA MER1_type 17 177 -83 583 245 109 11 chr20 5826813 5826997 -66326885 - L1ME3A LINE L1 -6 6164 5963 392 191 95 0 chr20 5827004 5827088 -66326794 + MER112 DNA MER1_type 161 252 -8 207 295 66 0 chr20 5827127 5827188 -66326694 - MIR SINE MIR -67 141 77 371 229 194 14 chr20 5827956 5828100 -66325782 - L2 LINE L2 -36 3277 3108 207 0 0 0 chr20 5828191 5828214 -66325668 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1787 159 0 0 chr20 5828216 5828499 -66325383 - AluJb SINE Alu -29 283 1 756 178 59 87 chr20 5829103 5829356 -66324526 - MLT1D LTR MaLR -256 249 4 190 341 71 29 chr20 5829579 5829749 -66324133 - L2 LINE L2 -578 2736 2560 845 289 135 27 chr20 5830157 5830558 -66323324 - MLT1K LTR MaLR -19 569 126 1979 193 23 3 chr20 5831063 5831416 -66322466 - MLT1A1 LTR MaLR 0 365 6 1131 70 41 35 chr20 5831535 5831707 -66322175 - MER30 DNA MER1_type -57 173 1 2010 122 0 22 chr20 5831716 5832027 -66321855 - AluSq SINE Alu -9 304 1 1259 63 11 37 chr20 5832721 5832910 -66320972 - L1PA3 LINE L1 0 6155 5972 953 143 35 64 chr20 5834034 5834083 -66319799 - MER3 DNA MER1_type 0 209 160 4349 126 22 27 chr20 5834083 5834824 -66319058 - L1MB3 LINE L1 -1 6182 5446 953 143 35 64 chr20 5834824 5834977 -66318905 - MER3 DNA MER1_type -49 160 13 209 217 0 22 chr20 5835448 5835494 -66318388 - L3 LINE CR1 -568 1009 965 233 286 16 0 chr20 5835554 5835617 -66318265 - MLT1K LTR MaLR -345 243 180 1504 281 59 23 chr20 5835704 5835733 -66318149 - L2 LINE L2 -823 2491 2465 1370 146 35 9 chr20 5835733 5835959 -66317923 + MER46A DNA MER2_type 3 234 -2 1504 281 59 23 chr20 5835959 5836501 -66317381 - L2 LINE L2 -849 2465 1899 661 184 0 0 chr20 5836614 5836723 -66317159 + FLAM_C SINE Alu 2 110 -33 400 166 23 168 chr20 5836723 5836807 -66317075 - L1MC5 LINE L1 -825 6983 7010 2162 102 3 0 chr20 5836807 5837112 -66316770 - AluSp SINE Alu -7 306 1 400 166 23 168 chr20 5837112 5837237 -66316645 - L1MC5 LINE L1 -797 7011 6870 2099 124 3 0 chr20 5837331 5837637 -66316245 - AluSx SINE Alu -1 311 5 236 233 139 0 chr20 5838988 5839074 -66314808 - L2 LINE L2 -35 3237 3140 841 208 0 0 chr20 5839095 5839254 -66314628 - AluJb SINE Alu -7 305 147 1157 329 172 18 chr20 5839404 5840612 -66313270 - L2 LINE L2 -357 2957 1564 207 100 0 0 chr20 5841085 5841115 -66312767 + (TA)n Simple_repeat Simple_repeat 2 31 0 2239 108 0 9 chr20 5841684 5841999 -66311883 + AluSx SINE Alu 1 312 0 277 176 206 0 chr20 5843037 5843105 -66310777 - L2 LINE L2 -2 3270 3189 1734 37 0 0 chr20 5844326 5844542 -66309340 + L1P LINE L1 3202 3417 -2729 224 311 90 57 chr20 5845303 5845425 -66308457 - MIR SINE MIR -116 146 21 241 262 55 67 chr20 5845928 5846092 -66307790 + L1ME LINE L1 5259 5420 -744 519 219 296 0 chr20 5847831 5848000 -66305882 + MIR SINE MIR 6 224 -38 2227 67 57 3 chr20 5848006 5848288 -66305594 + AluY SINE Alu 1 297 -14 2216 77 0 0 chr20 5849077 5849361 -66304521 + AluSg SINE Alu 21 304 0 308 221 130 102 chr20 5899803 5900088 -66253794 + L1M2 LINE L1 445 737 -6112 299 281 0 22 chr20 5900567 5900656 -66253226 - Charlie8 DNA MER1_type -2205 212 126 198 220 40 0 chr20 5900755 5900805 -66253077 + MIR3 SINE MIR 150 201 -7 736 268 119 40 chr20 5901341 5901796 -66252086 - LTR16C LTR ERVL 0 491 1 204 40 0 0 chr20 5902657 5902682 -66251200 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 970 193 0 0 chr20 5902682 5902832 -66251050 - FRAM SINE Alu -16 150 1 1466 190 6 100 chr20 5902849 5903180 -66250702 - AluJb SINE Alu -2 300 1 496 289 0 72 chr20 5903298 5903354 -66250528 + L1ME LINE L1 5548 5606 -515 1752 175 10 7 chr20 5903354 5903646 -66250236 + AluJo SINE Alu 1 293 -19 496 289 0 72 chr20 5903646 5903797 -66250085 + L1ME LINE L1 5606 5740 -381 2467 70 3 6 chr20 5904553 5904865 -66249017 - AluY SINE Alu 0 311 1 322 203 16 0 chr20 5905329 5905393 -66248489 - LTR16C LTR ERVL 0 491 427 347 222 20 10 chr20 5905431 5905530 -66248352 - MLT1H LTR MaLR -419 130 31 303 265 10 20 chr20 5905613 5905715 -66248167 + LTR67 LTR ERVL 457 557 0 304 206 165 52 chr20 5905719 5905816 -66248066 - MIR SINE MIR -147 115 8 2829 120 34 5 chr20 5907157 5907573 -66246309 - L1PA15 LINE L1 -7 6158 5731 198 0 0 0 chr20 5907823 5907845 -66246037 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2460 36 0 0 chr20 5907845 5908124 -66245758 - AluY SINE Alu -32 279 1 403 0 0 0 chr20 5908505 5908552 -66245330 + L1PA3 LINE L1 6106 6152 -3 374 285 176 6 chr20 5909686 5909851 -66244031 - MER91A DNA MER1_type -2 194 2 858 212 0 18 chr20 5911970 5912140 -66241742 - MER5B DNA MER1_type -3 175 9 2134 118 20 3 chr20 5912224 5912529 -66241353 - AluSx SINE Alu -2 310 1 5766 150 10 18 chr20 5912682 5913610 -66240272 - MER49 LTR ERV1 0 923 4 2762 203 59 89 chr20 5913614 5914458 -66239424 - MER49-int LTR ERV1 -1 6757 5939 483 98 113 217 chr20 5914460 5914533 -66239349 - MER49-int LTR ERV1 -1367 4964 4885 2020 152 49 21 chr20 5914533 5914861 -66239021 - MER1B DNA MER1_type 0 337 1 483 98 113 217 chr20 5914861 5914918 -66238964 - MER49-int LTR ERV1 -1446 4885 4860 862 154 0 0 chr20 5914918 5915041 -66238841 - FLAM_C SINE Alu -9 124 2 483 98 113 217 chr20 5915041 5915112 -66238770 - MER49-int LTR ERV1 -1471 4860 4783 495 161 7 72 chr20 5915260 5915464 -66238418 - MER49-int LTR ERV1 -4167 3953 3786 588 189 56 39 chr20 5915625 5915863 -66238019 - LTR49-int LTR ERV1 -1865 4733 3913 904 174 7 7 chr20 5915868 5916023 -66237859 + FRAM SINE Alu 4 158 -18 3054 144 29 8 chr20 5916060 5916691 -66237191 - Ricksha DNA DNA -1368 1878 1201 1281 135 333 7 chr20 5916689 5916971 -66236911 - Ricksha DNA DNA -2870 376 3 * 339 268 95 60 chr20 5916980 5917148 -66236734 - MLT1H LTR MaLR -252 297 124 365 0 22 0 chr20 5917378 5917423 -66236459 + (TG)n Simple_repeat Simple_repeat 2 47 0 7196 68 13 13 chr20 5917460 5918452 -66235430 - L1PA10 LINE L1 -3 6165 5171 1480 279 109 33 chr20 5918567 5919285 -66234597 + L1MC4 LINE L1 7270 8041 -1 188 33 0 33 chr20 5919380 5919410 -66234472 + (CAA)n Simple_repeat Simple_repeat 2 30 0 12274 181 37 15 chr20 5919935 5921779 -66232103 + L1MB3 LINE L1 25 1825 -4594 2083 153 3 0 chr20 5921779 5922086 -66231796 - AluJb SINE Alu -4 308 1 12274 181 37 15 chr20 5922086 5925333 -66228549 + L1MB3 LINE L1 1825 5188 -1231 1853 157 16 16 chr20 5925333 5925645 -66228237 - AluJb SINE Alu 0 312 1 12274 181 37 15 chr20 5925645 5926905 -66226977 + L1MB3 LINE L1 5188 6418 -1 188 246 74 66 chr20 5928037 5928159 -66225723 - L2 LINE L2 -184 3088 2966 28 0 0 0 chr20 5928460 5928488 -66225394 + AT_rich Low_complexity Low_complexity 1 28 0 276 350 68 0 chr20 5929463 5929580 -66224302 + L2 LINE L2 2928 3052 -220 1857 166 5 93 chr20 5929921 5930318 -66223564 - MLT1A1 LTR MaLR 0 365 4 551 294 77 21 chr20 5930326 5930561 -66223321 - MIR SINE MIR -10 252 5 1950 185 75 23 chr20 5931483 5931921 -66221961 + MLT1C LTR MaLR 6 466 -1 542 270 18 25 chr20 5931933 5932096 -66221786 + MER5B DNA MER1_type 17 178 0 445 250 0 0 chr20 5932559 5932647 -66221235 + MER5A DNA MER1_type 15 102 -87 889 234 27 0 chr20 5933007 5933191 -66220691 + MER5A DNA MER1_type 1 189 0 1116 191 132 0 chr20 5933297 5933532 -66220350 + L1ME3A LINE L1 5707 5972 -198 2015 123 19 32 chr20 5933644 5933953 -66219929 - AluSx SINE Alu -7 305 1 555 261 6 22 chr20 5934006 5934186 -66219696 + L1ME3A LINE L1 5989 6165 -5 315 367 14 14 chr20 5935004 5935151 -66218731 - MIR3 SINE MIR -24 184 38 2637 102 8 8 chr20 5935343 5935697 -66218185 - THE1A LTR MaLR 0 355 2 2372 42 0 17 chr20 5935716 5936036 -66217846 - AluY SINE Alu 0 315 1 26 30 0 0 chr20 5936036 5936069 -66217813 + AT_rich Low_complexity Low_complexity 1 33 0 259 295 77 0 chr20 5936168 5936246 -66217636 - L2 LINE L2 -25 3247 3164 21 57 0 0 chr20 5936728 5936763 -66217119 + AT_rich Low_complexity Low_complexity 1 35 0 204 319 76 17 chr20 5936801 5936920 -66216962 - L3 LINE CR1 -315 1262 1137 28 48 0 0 chr20 5937008 5937050 -66216832 + AT_rich Low_complexity Low_complexity 1 42 0 191 39 39 59 chr20 5937120 5937171 -66216711 + (TTAAA)n Simple_repeat Simple_repeat 1 50 0 22 0 0 0 chr20 5937171 5937193 -66216689 + AT_rich Low_complexity Low_complexity 1 22 0 184 359 39 0 chr20 5937277 5937380 -66216502 + L3 LINE CR1 1137 1243 -334 252 265 31 20 chr20 5937385 5937483 -66216399 - LTR67 LTR ERVL 0 557 459 243 302 147 9 chr20 5937816 5937932 -66215950 + L2 LINE L2 3137 3268 -4 226 339 52 9 chr20 5937950 5938065 -66215817 + L3 LINE CR1 1283 1402 -175 357 305 116 12 chr20 5938139 5938303 -66215579 + MLT1K LTR MaLR 31 211 -377 431 303 49 6 chr20 5938635 5938797 -66215085 + MER117 DNA MER1_type 29 197 0 720 208 13 0 chr20 5938847 5939001 -66214881 - MER3 DNA MER1_type 0 2624 2469 470 177 0 0 chr20 5938999 5939078 -66214804 - MER3 DNA MER1_type -92 117 39 * 331 299 24 24 chr20 5939078 5939205 -66214677 - MIR3 SINE MIR -12 196 70 2535 186 38 30 chr20 5939255 5939756 -66214126 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr20 5940569 5940590 -66213292 + AT_rich Low_complexity Low_complexity 1 21 0 414 289 44 13 chr20 5940650 5940809 -66213073 - MIR3 SINE MIR -11 197 34 850 294 82 8 chr20 5941411 5941765 -66212117 + L1M4 LINE L1 4970 5349 -797 2343 93 0 3 chr20 5942077 5942378 -66211504 + AluY SINE Alu 1 300 -11 577 166 83 78 chr20 5942382 5942526 -66211356 + Charlie2 DNA MER1_type 2654 2801 -61 2187 165 40 3 chr20 5942526 5942878 -66211004 - MLT1A1 LTR MaLR 0 365 1 577 166 83 78 chr20 5942878 5942938 -66210944 + Charlie2 DNA MER1_type 2801 2859 -3 2445 73 0 0 chr20 5943574 5943877 -66210005 - AluY SINE Alu -8 303 1 200 256 0 0 chr20 5944229 5944272 -66209610 - L3 LINE CR1 -3 1574 1532 540 248 88 44 chr20 5944653 5944792 -66209090 + MIR SINE MIR 24 178 -84 2412 219 56 19 chr20 5944792 5945312 -66208570 + MLT1F LTR MaLR 4 542 0 540 248 88 44 chr20 5945312 5945398 -66208484 + MIR SINE MIR 178 259 -3 27 29 0 0 chr20 5945837 5945871 -66208011 + AT_rich Low_complexity Low_complexity 1 34 0 336 248 103 8 chr20 5946459 5946576 -66207306 - MIR SINE MIR -75 187 60 590 135 198 18 chr20 5946681 5946792 -66207090 + FLAM_C SINE Alu 1 131 -2 278 111 111 0 chr20 5946814 5946868 -66207014 - L1MB1 LINE L1 0 6168 6109 5196 127 10 6 chr20 5946906 5947623 -66206259 - MER72 LTR ERV1 0 722 3 1058 173 0 0 chr20 5947773 5947941 -66205941 + LTR54 LTR ERV1 1 168 -342 2327 184 108 30 chr20 5947978 5948515 -66205367 + LTR8 LTR ERV1 113 691 0 518 202 32 0 chr20 5948520 5948644 -66205238 + LTR54B LTR ERV1 365 492 -6 2574 158 40 40 chr20 5948779 5949285 -66204597 - MER34C LTR ERV1 -79 506 1 2272 105 3 0 chr20 5949729 5950025 -66203857 - AluSg SINE Alu -13 297 1 2625 166 66 130 chr20 5950254 5951031 -66202851 - LTR8A LTR ERV1 0 727 1 1995 151 169 17 chr20 5951065 5951468 -66202414 - MER31B LTR ERV1 0 466 3 257 241 69 23 chr20 5951760 5951847 -66202035 + L1ME3A LINE L1 5970 6060 -110 1896 128 35 25 chr20 5952030 5952312 -66201570 + THE1B LTR MaLR 80 364 0 511 333 56 17 chr20 5952314 5952725 -66201157 + L1M4 LINE L1 4743 5169 -977 652 226 99 32 chr20 5952791 5953012 -66200870 + L2 LINE L2 1342 1577 -1737 4124 139 77 9 chr20 5953022 5953682 -66200200 + MER39 LTR ERV1 3 707 0 1663 275 125 27 chr20 5953711 5953997 -66199885 + L2 LINE L2 2244 2501 -812 1954 146 3 3 chr20 5953997 5954284 -66199598 + AluJo SINE Alu 1 287 -25 279 0 0 0 chr20 5954285 5954316 -66199566 + (CA)n Simple_repeat Simple_repeat 2 32 0 1663 275 125 27 chr20 5954316 5954868 -66199014 + L2 LINE L2 2500 3162 -151 275 253 0 40 chr20 5956020 5956095 -66197787 - L1MD2 LINE L1 -262 6097 6026 1613 179 137 23 chr20 5956096 5956482 -66197400 - MER45B DNA AcHobo 0 1040 611 396 221 176 22 chr20 5956958 5957094 -66196788 + MIR SINE MIR 3 159 -103 351 190 220 0 chr20 5957106 5957206 -66196676 - L1ME3A LINE L1 -1 6169 6048 355 233 14 0 chr20 5957230 5957303 -66196579 + MIR SINE MIR 168 241 -21 23 0 0 0 chr20 5958729 5958752 -66195130 + AT_rich Low_complexity Low_complexity 1 23 0 180 77 0 0 chr20 5958831 5958857 -66195025 + (TG)n Simple_repeat Simple_repeat 2 27 0 1166 274 100 52 chr20 5959592 5960091 -66193791 + MLT1G1 LTR MaLR 73 595 0 801 189 8 0 chr20 5961080 5961207 -66192675 - FLAM_C SINE Alu -14 129 2 198 244 35 58 chr20 5961398 5961484 -66192398 + MIR SINE MIR 173 256 -6 256 271 8 17 chr20 5961519 5961637 -66192245 + (TA)n Simple_repeat Simple_repeat 1 117 0 186 133 0 0 chr20 5962031 5962061 -66191821 + (ATG)n Simple_repeat Simple_repeat 3 32 0 183 288 51 0 chr20 5962065 5962124 -66191758 - MIR SINE MIR -8 254 193 193 318 162 26 chr20 5962160 5962314 -66191568 - MIR3 SINE MIR -17 191 17 235 176 39 20 chr20 5962468 5962519 -66191363 + L1ME2 LINE L1 5998 6049 -115 2198 100 0 61 chr20 5962525 5962855 -66191027 + AluSx SINE Alu 1 310 -2 241 248 15 128 chr20 5962860 5962993 -66190889 + L1ME2 LINE L1 6038 6155 -9 493 108 14 0 chr20 5963058 5963132 -66190750 - MSTB1 LTR MaLR 0 426 352 4902 14 0 0 chr20 5963132 5964037 -66189845 - L1P1 LINE L1 -422 5733 4829 3715 17 0 0 chr20 5964036 5964453 -66189429 + L1HS LINE L1 5739 6155 0 * 24 0 0 0 chr20 5964453 5964477 -66189405 + AT_rich Low_complexity Low_complexity 1 24 0 1141 165 151 58 chr20 5964477 5964904 -66188978 - MSTB1 LTR MaLR -55 377 1 21 36 0 0 chr20 5965297 5965325 -66188557 + AT_rich Low_complexity Low_complexity 1 28 0 15532 158 33 17 chr20 5966033 5968344 -66185538 + L1MA4A LINE L1 857 3131 -3874 858 165 0 15 chr20 5968344 5968477 -66185405 + FLAM_C SINE Alu 1 131 -2 15532 158 33 17 chr20 5968477 5970204 -66183678 + L1MA4A LINE L1 3131 4830 -2175 2271 113 0 3 chr20 5970204 5970504 -66183378 + AluSc SINE Alu 1 299 -10 15532 158 33 17 chr20 5970504 5972513 -66181369 + L1MA4A LINE L1 4830 7003 -2 485 284 152 52 chr20 5972557 5973426 -66180456 + L1 LINE L1 2187 3142 -3004 368 285 85 41 chr20 5973440 5973686 -66180196 + L1 LINE L1 3195 3451 -2695 1141 287 6 33 chr20 5974107 5974473 -66179409 + MER90 LTR ERV1 258 613 -1 1800 181 10 0 chr20 5974588 5974897 -66178985 + AluJb SINE Alu 1 312 0 181 216 27 0 chr20 5975483 5975520 -66178362 - L2 LINE L2 -25 3247 3210 397 326 52 17 chr20 5975529 5975589 -66178293 - MER5A DNA MER1_type -3 186 130 1743 181 3 30 chr20 5975589 5975893 -66177989 - AluJo SINE Alu -16 296 1 397 326 52 17 chr20 5975893 5976004 -66177878 - MER5A DNA MER1_type -59 130 9 304 308 115 0 chr20 5976044 5976148 -66177734 + MER5B DNA MER1_type 1 116 -62 390 331 51 6 chr20 5976181 5976338 -66177544 - MIR SINE MIR -94 168 5 5712 55 1 12 chr20 5977010 5977696 -66176186 - L1PA7 LINE L1 0 6154 5476 8849 80 4 2 chr20 5977700 5978968 -66174914 + L1PA7 LINE L1 4214 5482 -690 464 262 32 24 chr20 5980250 5980376 -66173506 + MER5B DNA MER1_type 4 130 -48 816 193 17 33 chr20 5980382 5980563 -66173319 - MER5B DNA MER1_type 0 178 1 265 86 0 0 chr20 5982669 5982704 -66171178 + U1 snRNA snRNA 1 35 -130 260 367 148 33 chr20 5982814 5983084 -66170798 + L2 LINE L2 2886 3186 -86 688 265 101 14 chr20 5984152 5984502 -66169380 + LTR33 LTR ERVL 49 513 -8 190 306 24 47 chr20 5984916 5985001 -66168881 + L2 LINE L2 2890 2972 -300 2323 148 98 25 chr20 5985205 5985604 -66168278 - MSTA LTR MaLR 0 428 1 9150 158 27 61 chr20 5985604 5987312 -66166570 - MSTA-int LTR MaLR 0 1651 2 51 17 0 0 chr20 5987382 5987440 -66166442 + AT_rich Low_complexity Low_complexity 1 58 0 2268 129 59 38 chr20 5987440 5987812 -66166070 - MSTA LTR MaLR -48 380 1 1229 172 89 41 chr20 5988182 5988628 -66165254 + LTR55 LTR ERV 1 519 -29 818 316 147 41 chr20 5989554 5990212 -66163670 + L2 LINE L2 252 979 -2335 323 244 206 8 chr20 5990601 5990732 -66163150 + MIR SINE MIR 56 212 -50 215 225 14 0 chr20 5990850 5990921 -66162961 + (TGAA)n Simple_repeat Simple_repeat 3 74 0 386 321 23 0 chr20 5991088 5991219 -66162663 - MIR SINE MIR -70 192 59 399 207 23 0 chr20 5991291 5991378 -66162504 - LTR16A LTR ERVL -218 232 144 4433 168 77 37 chr20 5992120 5992949 -66160933 - MER21B LTR ERV1 0 863 2 1683 100 4 13 chr20 5993135 5993365 -66160517 + AluSx SINE Alu 1 228 -84 24 0 0 0 chr20 5993557 5993581 -66160301 + AT_rich Low_complexity Low_complexity 1 24 0 533 206 18 88 chr20 5994202 5994372 -66159510 - L1ME3 LINE L1 -2 6160 6003 263 360 202 0 chr20 5994928 5995131 -66158751 - MIR SINE MIR -5 257 14 1819 194 93 63 chr20 5996105 5996248 -66157634 + MLT2B1 LTR ERVL 1 138 -382 2284 120 37 35 chr20 5996248 5996622 -66157260 + THE1C LTR MaLR 1 375 0 1819 194 93 63 chr20 5996622 5996983 -66156899 + MLT2B1 LTR ERVL 138 520 0 499 218 0 0 chr20 5997075 5997176 -66156706 - MER5A DNA MER1_type -80 109 9 1461 258 52 31 chr20 5997886 5998331 -66155551 - MER115 DNA AcHobo -4 689 236 2742 124 48 10 chr20 5998641 5999053 -66154829 - MSTA LTR MaLR 0 428 1 247 316 0 13 chr20 5999589 5999668 -66154214 + L2 LINE L2 3173 3250 -22 316 257 65 41 chr20 5999786 6000002 -66153880 + MLT1H LTR MaLR 19 247 -162 1376 177 52 72 chr20 6000099 6000404 -66153478 + AluJo SINE Alu 1 299 -13 257 222 14 17 chr20 6000426 6000518 -66153364 + MLT1J2 LTR MaLR 364 624 -2 10566 25 1 0 chr20 6000755 6002743 -66151139 - L1PA3 LINE L1 0 6155 4167 2510 123 9 61 chr20 6002744 6003080 -66150802 - MER34B LTR ERV1 -163 402 91 2231 115 0 13 chr20 6003080 6003385 -66150497 - AluSx SINE Alu -11 301 1 2510 123 9 61 chr20 6003385 6003472 -66150410 - MER34B LTR ERV1 -474 91 1 184 143 0 24 chr20 6003588 6003630 -66150252 + L2 LINE L2 3273 3313 0 339 224 122 0 chr20 6003653 6003760 -66150122 - MIR3 SINE MIR -49 159 40 323 286 0 0 chr20 6003819 6003896 -66149986 + MER94 DNA DNA 2 78 -56 5582 153 16 19 chr20 6003896 6004014 -66149868 + L1PB3 LINE L1 4793 4910 -1244 2380 93 6 0 chr20 6004014 6004325 -66149557 - AluSp SINE Alu 0 313 1 5582 153 16 19 chr20 6004325 6005582 -66148300 + L1PB3 LINE L1 4910 6153 -1 2062 147 7 85 chr20 6005684 6005871 -66148011 + MLT1B LTR MaLR 1 138 -252 1598 183 52 3 chr20 6005871 6006161 -66147721 + AluJb SINE Alu 5 308 -4 2062 147 7 85 chr20 6006161 6006396 -66147486 + MLT1B LTR MaLR 138 390 0 837 308 61 8 chr20 6006521 6006881 -66147001 + MLT2F LTR ERVL 4 382 -281 * 1791 175 64 63 chr20 6006875 6007277 -66146605 - MLT1D LTR MaLR -82 385 3 566 292 139 17 chr20 6007609 6007962 -66145920 + HAL1 LINE L1 2074 2469 -38 2240 114 0 64 chr20 6008988 6009348 -66144534 - MER1B DNA MER1_type 0 337 1 2273 102 0 0 chr20 6010601 6010908 -66142974 + AluSx SINE Alu 1 307 0 475 285 50 53 chr20 6011057 6011284 -66142598 - MIR SINE MIR -14 248 22 1129 209 0 5 chr20 6011558 6011769 -66142113 + MER63A DNA MER1_type 1 210 0 2095 139 0 3 chr20 6012082 6012385 -66141497 + AluSx SINE Alu 1 302 -10 2412 103 0 0 chr20 6013189 6013501 -66140381 - AluSx SINE Alu 0 312 1 2389 173 48 52 chr20 6015713 6016229 -66137653 - MLT2B2 LTR ERVL 0 515 2 743 164 0 16 chr20 6018354 6018482 -66135400 + FLAM_C SINE Alu 1 126 -17 433 305 108 0 chr20 6018684 6018851 -66135031 + MIR SINE MIR 4 188 -74 3773 221 73 44 chr20 6019100 6019816 -66134066 - L1MC3 LINE L1 0 7807 7113 192 97 0 0 chr20 6019816 6019847 -66134035 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3773 221 73 44 chr20 6019847 6020580 -66133302 - L1MC3 LINE L1 -694 7113 6403 342 0 0 0 chr20 6020580 6020618 -66133264 + (TC)n Simple_repeat Simple_repeat 2 39 0 * 369 0 0 0 chr20 6020617 6020658 -66133224 + (TA)n Simple_repeat Simple_repeat 1 41 0 3773 221 73 44 chr20 6020618 6020812 -66133070 - L1MC3 LINE L1 -1404 6403 6272 2253 124 0 0 chr20 6021096 6021395 -66132487 + AluSx SINE Alu 1 299 -13 7734 129 2 11 chr20 6021653 6022630 -66131252 - L1PA10 LINE L1 0 6168 5184 2283 120 0 3 chr20 6022630 6022938 -66130944 - AluSg SINE Alu -3 307 1 7734 129 2 11 chr20 6022938 6023946 -66129936 - L1PA10 LINE L1 -984 5184 4185 5657 144 1 7 chr20 6023946 6024868 -66129014 + L1PA10 LINE L1 3261 4177 -1969 2155 128 103 30 chr20 6025964 6026363 -66127519 + MSTA LTR MaLR 1 428 0 22 70 0 0 chr20 6026888 6026931 -66126951 + AT_rich Low_complexity Low_complexity 1 43 0 216 182 23 0 chr20 6027548 6027592 -66126290 + MIR SINE MIR 108 152 -56 2114 217 97 4 chr20 6028500 6028984 -66124898 - MLT1F LTR MaLR -13 529 1 2138 117 0 0 chr20 6029909 6030222 -66123660 - AluSg SINE Alu 0 313 1 186 289 12 36 chr20 6030328 6030411 -66123471 - MIR SINE MIR -56 206 126 34 42 0 0 chr20 6030621 6030669 -66123213 + AT_rich Low_complexity Low_complexity 1 48 0 212 274 69 10 chr20 6031255 6031357 -66122525 - MIR SINE MIR -65 143 36 493 107 0 12 chr20 6031449 6031533 -66122349 - Alu SINE Alu 0 312 230 2647 153 35 31 chr20 6032377 6032806 -66121076 - LTR34 LTR ERV1 0 699 266 2217 117 0 16 chr20 6032806 6032943 -66120939 + AluSx SINE Alu 1 139 -173 2281 116 10 0 chr20 6032943 6033245 -66120637 + AluSq SINE Alu 1 305 -8 2217 117 0 16 chr20 6033245 6033414 -66120468 + AluSx SINE Alu 139 302 -10 2647 153 35 31 chr20 6033414 6033466 -66120416 - LTR34 LTR ERV1 -433 266 216 1669 174 17 17 chr20 6033466 6033760 -66120122 - MER41D LTR ERV1 0 557 264 667 143 29 0 chr20 6033762 6033867 -66120015 + FLAM_C SINE Alu 11 118 -25 252 156 0 0 chr20 6033891 6033914 -66119968 + A-rich Low_complexity Low_complexity 1 23 -22 2542 68 0 0 chr20 6033914 6034225 -66119657 + AluY SINE Alu 1 311 0 252 156 0 0 chr20 6034225 6034246 -66119636 + A-rich Low_complexity Low_complexity 22 45 0 1509 185 9 56 chr20 6034251 6034570 -66119312 + AluJb SINE Alu 1 304 -8 320 176 15 0 chr20 6034577 6034645 -66119237 + GA-rich Low_complexity Low_complexity 3 71 0 1781 138 4 0 chr20 6034647 6034916 -66118966 - MER41D LTR ERV1 -283 274 5 1347 106 63 0 chr20 6034913 6035120 -66118762 - LTR34 LTR ERV1 -479 220 1 * 204 40 0 0 chr20 6035353 6035378 -66118504 + (CCCCCT)n Simple_repeat Simple_repeat 4 28 0 6352 61 5 290 chr20 6035382 6037213 -66116669 + SVA Other Other 61 1369 -17 414 0 0 0 chr20 6037220 6037266 -66116616 + (TA)n Simple_repeat Simple_repeat 2 47 0 7340 124 41 65 chr20 6037292 6037658 -66116224 - LTR49-int LTR ERV1 -352 5979 5606 2215 106 3 0 chr20 6037658 6037941 -66115941 + AluSx SINE Alu 1 284 -28 7340 124 41 65 chr20 6037941 6038167 -66115715 - LTR49-int LTR ERV1 -725 5606 5376 1460 178 94 7 chr20 6038167 6038443 -66115439 - AluJo SINE Alu 0 302 3 7340 124 41 65 chr20 6038443 6038590 -66115292 - LTR49-int LTR ERV1 -955 5376 5227 1834 160 3 20 chr20 6038590 6038896 -66114986 + AluJb SINE Alu 1 301 -11 7340 124 41 65 chr20 6038896 6039326 -66114556 - LTR49-int LTR ERV1 -1104 5227 4788 2397 94 0 3 chr20 6039326 6039623 -66114259 + AluSx SINE Alu 1 296 -16 7340 124 41 65 chr20 6039623 6039769 -66114113 - LTR49-int LTR ERV1 -1543 4788 4694 1775 179 7 3 chr20 6039769 6040070 -66113812 - AluJb SINE Alu -10 302 1 7340 124 41 65 chr20 6040070 6040145 -66113737 - LTR49-int LTR ERV1 -1637 4694 4619 31490 111 15 56 chr20 6040145 6041287 -66112595 - L1PA8 LINE L1 -2 6170 4982 2302 113 0 0 chr20 6041287 6041587 -66112295 - AluSq SINE Alu -13 300 1 31490 111 15 56 chr20 6041587 6046883 -66106999 - L1PA8 LINE L1 -1190 4982 7 3379 129 19 19 chr20 6046885 6047480 -66106402 - LTR49-int LTR ERV1 -1700 4631 4037 1427 171 24 120 chr20 6047534 6048145 -66105737 + MER52A LTR ERV1 660 1349 -406 325 238 14 61 chr20 6048124 6048271 -66105611 + LTR28 LTR ERV1 577 716 -304 * 2087 217 65 46 chr20 6048245 6048784 -66105098 + MER52A LTR ERV1 1207 1755 0 330 305 61 12 chr20 6049858 6050022 -66103860 - MIR SINE MIR 0 262 91 201 341 0 33 chr20 6050112 6050203 -66103679 - MER5A DNA MER1_type -44 145 58 755 255 62 42 chr20 6050241 6050478 -66103404 + MLT1G1 LTR MaLR 4 198 -369 310 142 19 213 chr20 6050577 6050650 -66103232 - L1ME3A LINE L1 -18 6152 6123 2384 106 0 6 chr20 6050650 6050961 -66102921 - AluSq SINE Alu -4 309 1 310 142 19 213 chr20 6050961 6051042 -66102840 - L1ME3A LINE L1 -47 6123 6028 * 3437 154 53 44 chr20 6051008 6051765 -66102117 + L1MB3 LINE L1 5259 6016 -167 196 271 94 0 chr20 6051786 6051871 -66102011 + MIR SINE MIR 40 132 -76 1144 166 0 44 chr20 6051939 6052144 -66101738 + AluJb SINE Alu 111 306 -6 325 331 48 14 chr20 6052787 6052932 -66100950 + MER5B DNA MER1_type 17 166 -12 221 232 0 93 chr20 6052998 6053149 -66100733 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 468 203 198 56 chr20 6055225 6055379 -66098503 - ORSL DNA AcHobo -9 266 135 2136 110 7 0 chr20 6055379 6055671 -66098211 - AluY SINE Alu -16 295 2 468 203 198 56 chr20 6055671 6055748 -66098134 - ORSL DNA AcHobo -140 135 2 193 284 20 69 chr20 6055800 6055902 -66097980 - L2 LINE L2 -2111 1203 1107 375 281 79 9 chr20 6058112 6058226 -66095656 + MIR SINE MIR 45 166 -96 7395 51 1 0 chr20 6059049 6060208 -66093674 + L1PA5 LINE L1 4995 6154 0 227 304 83 83 chr20 6060661 6060937 -66092945 - L2 LINE L2 -30 3242 2967 2182 120 7 13 chr20 6061091 6061391 -66092491 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr20 6061930 6061952 -66091930 + AT_rich Low_complexity Low_complexity 1 22 0 782 196 0 7 chr20 6062094 6062232 -66091650 - AluJb SINE Alu -18 294 158 2200 173 40 43 chr20 6062232 6062378 -66091504 + L1M4 LINE L1 4973 5118 -1066 1696 160 0 67 chr20 6062378 6062691 -66091191 + AluJo SINE Alu 1 292 -20 2200 173 40 43 chr20 6062691 6063150 -66090732 + L1M4 LINE L1 5118 5577 -607 1944 155 3 16 chr20 6063150 6063454 -66090428 + AluJb SINE Alu 1 300 -12 2200 173 40 43 chr20 6063454 6063520 -66090362 + L1M4 LINE L1 5577 5642 -542 2286 88 3 3 chr20 6063520 6063832 -66090050 + AluSq SINE Alu 1 312 0 2200 173 40 43 chr20 6063832 6064009 -66089873 + L1M4 LINE L1 5642 5819 -365 267 254 15 15 chr20 6064014 6064081 -66089801 + AluS SINE Alu 1 67 -236 253 123 154 46 chr20 6064192 6064257 -66089625 - MER51A LTR ERV1 -94 540 469 546 270 8 0 chr20 6064532 6064658 -66089224 - MER89-int LTR ERV1 0 7816 7690 1104 318 45 37 chr20 6064871 6065673 -66088209 - MER89-int LTR ERV1 -1488 6268 5461 21 0 0 0 chr20 6066850 6066871 -66087011 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 6067198 6067342 -66086540 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 6067639 6067935 -66085947 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 6069811 6070099 -66083783 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 6070446 6070738 -66083144 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 6071258 6071290 -66082592 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 6071335 6072180 -66081702 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 6072198 6073141 -66080741 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 6073141 6073452 -66080430 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 6073452 6073912 -66079970 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 6073927 6074077 -66079805 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 6074077 6074129 -66079753 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 6074129 6074475 -66079407 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 6074691 6074817 -66079065 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 6075898 6076343 -66077539 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 6077125 6077185 -66076697 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 6077353 6077405 -66076477 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 6078263 6078502 -66075380 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 6078568 6078667 -66075215 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 6078825 6078919 -66074963 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 6078964 6079233 -66074649 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 6080497 6080796 -66073086 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 6082085 6082175 -66071707 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 6083401 6083508 -66070374 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 6085706 6085834 -66068048 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 6085860 6085937 -66067945 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 6085937 6086245 -66067637 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 6086245 6086301 -66067581 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 6086301 6086586 -66067296 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 6086586 6086690 -66067192 + ORSL DNA AcHobo 118 266 -9 694 153 0 30 chr20 6087855 6087916 -66065966 - L1MB7 LINE L1 -10 6174 6113 1926 120 0 57 chr20 6087916 6088242 -66065640 + AluSx SINE Alu 1 309 0 694 153 0 30 chr20 6088242 6088310 -66065572 - L1MB7 LINE L1 -71 6113 6048 452 167 0 13 chr20 6088318 6088396 -66065486 - FLAM SINE Alu -23 120 44 2328 179 45 34 chr20 6088473 6088711 -66065171 - L1MB7 LINE L1 -366 5818 5584 1704 174 54 7 chr20 6088711 6088892 -66064990 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 6088892 6088935 -66064947 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1704 174 54 7 chr20 6088935 6089051 -66064831 - AluJb SINE Alu -202 110 1 2328 179 45 34 chr20 6089051 6089488 -66064394 - L1MB7 LINE L1 -600 5584 5137 1591 152 4 43 chr20 6089506 6089783 -66064099 - AluJo SINE Alu -15 297 32 1099 360 3 33 chr20 6090036 6090339 -66063543 - AluJo SINE Alu -8 294 1 855 310 6 12 chr20 6091793 6091964 -66061918 - AluJb SINE Alu -12 300 131 463 274 0 0 chr20 6091983 6092056 -66061826 + AluS SINE Alu 3 75 -234 756 359 0 40 chr20 6092056 6092254 -66061628 + AluSp SINE Alu 120 309 -4 244 265 0 0 chr20 6093290 6093339 -66060543 + (TG)n Simple_repeat Simple_repeat 2 50 0 1178 281 10 46 chr20 6094649 6094952 -66058930 - AluJb SINE Alu -10 302 11 691 396 12 60 chr20 6095708 6095958 -66057924 - AluJo SINE Alu -20 292 55 1206 313 0 51 chr20 6096088 6096401 -66057481 + AluSx SINE Alu 3 299 -3 789 239 6 34 chr20 6096447 6096623 -66057259 + FRAM SINE Alu 1 167 -9 1211 317 4 15 chr20 6097297 6097556 -66056326 - AluJo SINE Alu -44 268 13 1397 341 0 26 chr20 6097584 6097889 -66055993 - AluSq SINE Alu -16 297 1 182 185 0 0 chr20 6098601 6098628 -66055254 + polypyrimidine Low_complexity Low_complexity 2 28 0 246 114 0 0 chr20 6099584 6099619 -66054263 - AluJo SINE Alu -264 35 1 182 250 0 18 chr20 6099620 6099676 -66054206 - MIR SINE MIR -60 202 148 2156 101 29 0 chr20 6099691 6099969 -66053913 + AluSx SINE Alu 11 296 -16 2234 114 3 3 chr20 6100404 6100702 -66053180 + AluSc SINE Alu 1 298 -11 2289 96 3 0 chr20 6100735 6101027 -66052855 + AluSx SINE Alu 1 293 -19 2243 130 3 0 chr20 6101396 6101704 -66052178 - AluSx SINE Alu -3 309 1 1331 163 45 0 chr20 6102025 6102270 -66051612 - L1 LINE L1 -811 5335 5080 1843 137 10 3 chr20 6102272 6102571 -66051311 + AluSx SINE Alu 1 301 -11 2281 88 0 3 chr20 6102616 6102921 -66050961 + AluSg SINE Alu 1 304 -6 2286 100 0 0 chr20 6103024 6103333 -66050549 - AluSc SINE Alu 0 309 1 2325 100 0 0 chr20 6103336 6103646 -66050236 - AluSx SINE Alu 0 312 3 1098 182 0 0 chr20 6103649 6103847 -66050035 + AluJb SINE Alu 106 303 -9 3638 138 60 31 chr20 6104333 6104623 -66049259 + LTR8 LTR ERV1 1 281 -410 1549 125 0 0 chr20 6104623 6104847 -66049035 + AluSx SINE Alu 54 277 -35 192 40 0 0 chr20 6104847 6104872 -66049010 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3638 138 60 31 chr20 6104872 6105252 -66048630 + LTR8 LTR ERV1 280 691 0 438 316 92 57 chr20 6105540 6105910 -66047972 - L2 LINE L2 0 3272 2890 2162 98 3 0 chr20 6105911 6106233 -66047649 + AluSx SINE Alu 3 312 0 1423 156 240 73 chr20 6106374 6106611 -66047271 + LTR54 LTR ERV1 1 197 -313 1727 144 45 0 chr20 6106611 6106902 -66046980 + AluSx SINE Alu 1 304 -8 1423 156 240 73 chr20 6106902 6107101 -66046781 + LTR54 LTR ERV1 197 510 0 22 0 0 0 chr20 6107227 6107249 -66046633 + AT_rich Low_complexity Low_complexity 1 22 0 2521 33 0 0 chr20 6107259 6107558 -66046324 + AluY SINE Alu 1 299 -12 670 191 0 23 chr20 6107558 6107681 -66046201 - FLAM_C SINE Alu -186 126 5 2174 84 14 0 chr20 6107697 6107994 -66045888 - AluSp SINE Alu -10 303 3 1571 145 27 37 chr20 6107999 6108295 -66045587 - AluJb SINE Alu -19 293 1 847 178 0 6 chr20 6108991 6109154 -66044728 + FRAM SINE Alu 1 162 -14 843 236 52 40 chr20 6109161 6109411 -66044471 - L1MB7 LINE L1 -68 6116 5864 1911 122 0 30 chr20 6109442 6109745 -66044137 - AluSg SINE Alu -16 294 1 2398 171 26 99 chr20 6109802 6110254 -66043628 - MER4D LTR ERV1 0 903 510 2036 145 0 0 chr20 6110254 6110564 -66043318 + AluSx SINE Alu 1 310 -2 2398 171 26 99 chr20 6110564 6110756 -66043126 - MER4D LTR ERV1 -393 510 306 1052 150 6 6 chr20 6110756 6110923 -66042959 - AluSg/x SINE Alu -12 298 132 2074 120 0 13 chr20 6110923 6111239 -66042643 - AluSx SINE Alu 0 312 1 493 132 53 63 chr20 6111243 6111439 -66042443 - MER4D LTR ERV1 -566 347 70 725 139 0 41 chr20 6111464 6111546 -66042336 - FLAM_C SINE Alu -194 118 41 2248 202 48 60 chr20 6111546 6112165 -66041717 + LTR9 LTR ERV1 1 612 0 725 139 0 41 chr20 6112165 6112204 -66041678 - FLAM_C SINE Alu -271 41 2 809 118 14 69 chr20 6112207 6112257 -66041625 - MER4D LTR ERV1 -664 239 188 1996 133 0 0 chr20 6112257 6112551 -66041331 - AluJb SINE Alu -18 294 1 809 118 14 69 chr20 6112551 6112644 -66041238 - MER4D LTR ERV1 -715 188 104 1269 128 63 48 chr20 6112644 6112914 -66040968 - MER4D LTR ERV1 0 903 534 2399 84 0 0 chr20 6112914 6113225 -66040657 + AluSx SINE Alu 1 311 -1 1269 128 63 48 chr20 6113225 6113365 -66040517 - MER4D LTR ERV1 -369 534 398 1936 146 3 1 chr20 6113365 6113673 -66040209 + MER1B DNA MER1_type 1 339 0 2191 110 3 0 chr20 6113689 6113998 -66039884 - AluSp SINE Alu -2 311 2 2063 130 19 6 chr20 6113998 6114320 -66039562 - MER4D LTR ERV1 -505 398 73 807 132 0 8 chr20 6114320 6114441 -66039441 + FLAM_C SINE Alu 12 131 -12 1109 204 71 19 chr20 6114489 6114812 -66039070 - L1M4 LINE L1 -1573 4573 4234 793 182 149 0 chr20 6114819 6114973 -66038909 - AluSp SINE Alu 0 313 137 1270 209 107 133 chr20 6114974 6115201 -66038681 - L1M4 LINE L1 -1903 4243 4012 1748 153 36 23 chr20 6115201 6115509 -66038373 - AluSx SINE Alu 0 312 1 1270 209 107 133 chr20 6115509 6115740 -66038142 - L1M4 LINE L1 -2134 4012 3805 2231 106 0 0 chr20 6115740 6116043 -66037839 - AluSq SINE Alu -10 303 1 1270 209 107 133 chr20 6116043 6116254 -66037628 - L1M4 LINE L1 -2341 3805 3590 491 143 22 0 chr20 6116439 6116530 -66037352 + GA-rich Low_complexity Low_complexity 5 97 0 2091 125 0 7 chr20 6116554 6116859 -66037023 - AluSg SINE Alu -7 303 1 2110 103 3 3 chr20 6117092 6117393 -66036489 - AluSg SINE Alu -9 301 1 1706 144 14 4 chr20 6117399 6117677 -66036205 - AluSx SINE Alu -7 305 25 1646 170 0 24 chr20 6117687 6117981 -66035901 - AluJb SINE Alu -25 287 1 460 185 65 146 chr20 6117984 6118244 -66035638 - L1MC4 LINE L1 0 8042 7804 264 308 142 73 chr20 6118245 6118551 -66035331 - L2 LINE L2 -1611 1703 1419 2145 118 0 0 chr20 6118551 6118855 -66035027 + AluSx SINE Alu 1 304 -8 264 308 142 73 chr20 6118855 6119205 -66034677 - L2 LINE L2 -1895 1419 1002 2901 65 3 0 chr20 6119209 6119576 -66034306 + L1PA8 LINE L1 5805 6172 0 181 286 36 48 chr20 6119722 6119748 -66034134 - MIR SINE MIR -32 230 205 2263 97 0 0 chr20 6119748 6120048 -66033834 - AluSx SINE Alu -12 300 1 181 286 36 48 chr20 6120048 6120105 -66033777 - MIR SINE MIR -57 205 148 2015 101 29 0 chr20 6120120 6120398 -66033484 + AluSx SINE Alu 11 296 -16 2171 104 3 3 chr20 6120833 6121132 -66032750 + AluSc SINE Alu 1 299 -10 2164 72 58 0 chr20 6121165 6121456 -66032426 + AluSp SINE Alu 1 308 -5 212 208 0 75 chr20 6121461 6121483 -66032399 - MIR SINE MIR -92 170 148 2993 121 26 2 chr20 6121483 6121937 -66031945 + MER4C LTR ERV1 1 465 0 212 208 0 75 chr20 6121937 6121967 -66031915 - MIR SINE MIR -114 148 122 2068 102 0 57 chr20 6121967 6122281 -66031601 + AluSx SINE Alu 1 296 -16 337 311 0 11 chr20 6122281 6122371 -66031511 - L1MC4 LINE L1 -1340 6702 6614 * 399 257 76 9 chr20 6122291 6122396 -66031486 + L1MC4 LINE L1 6610 6721 -1321 357 232 24 12 chr20 6122397 6122479 -66031403 - MIR SINE MIR -146 116 34 1348 196 0 33 chr20 6122548 6122824 -66031058 + AluJo SINE Alu 1 267 -45 848 140 0 0 chr20 6123205 6123341 -66030541 - FLAM_C SINE Alu -1 142 7 2125 104 0 25 chr20 6123371 6123688 -66030194 - AluSg SINE Alu -1 309 1 836 134 0 8 chr20 6123925 6124059 -66029823 - AluSq/x SINE Alu -179 133 1 591 216 145 30 chr20 6124630 6124846 -66029036 + MIR SINE MIR 11 250 -12 779 181 0 0 chr20 6124912 6125045 -66028837 - FLAM_C SINE Alu 0 133 1 1512 157 18 28 chr20 6125263 6125578 -66028304 - AluJo SINE Alu 0 312 1 2066 119 3 3 chr20 6126113 6126415 -66027467 - AluSx SINE Alu -10 302 1 264 281 265 22 chr20 6126534 6126719 -66027163 + L2 LINE L2 3029 3258 -14 413 150 0 0 chr20 6126948 6127008 -66026874 - tRNA-Gly-GGA tRNA tRNA -1 74 15 1743 167 7 7 chr20 6127042 6127347 -66026535 - AluJo SINE Alu -7 305 1 14503 120 36 60 chr20 6127563 6127862 -66026020 - Tigger7 DNA MER2_type 0 2487 2182 2370 88 0 0 chr20 6127862 6128167 -66025715 + AluSq SINE Alu 1 305 -8 14503 120 36 60 chr20 6128167 6130004 -66023878 - Tigger7 DNA MER2_type -305 2182 419 2225 106 0 3 chr20 6130004 6130316 -66023566 - AluSq SINE Alu -2 311 1 14503 120 36 60 chr20 6130316 6130726 -66023156 - Tigger7 DNA MER2_type -2068 419 1 905 137 0 0 chr20 6130774 6130913 -66022969 + FLAM_C SINE Alu 5 143 0 195 42 0 0 chr20 6131775 6131799 -66022083 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 513 300 67 38 chr20 6131839 6132049 -66021833 + MIR SINE MIR 47 262 0 2308 93 3 0 chr20 6132062 6132372 -66021510 + AluSq SINE Alu 1 311 -2 2298 113 126 5 chr20 6132594 6132976 -66020906 - MSTA LTR MaLR 0 428 1 193 302 16 0 chr20 6132986 6133049 -66020833 - L3b LINE CR1 -340 1243 1180 1612 153 3 14 chr20 6133186 6133473 -66020409 - AluJo SINE Alu -18 294 11 621 277 79 5 chr20 6133803 6134005 -66019877 + MIR SINE MIR 33 249 -13 2098 95 3 38 chr20 6134064 6134379 -66019503 - AluSx SINE Alu -8 304 1 1015 200 121 17 chr20 6134380 6134620 -66019262 - MLT1A1 LTR MaLR -11 354 90 2064 104 0 0 chr20 6134621 6134908 -66018974 + AluSx SINE Alu 1 287 -25 402 238 65 138 chr20 6135040 6135131 -66018751 - MIR SINE MIR 0 262 166 2194 107 3 0 chr20 6135131 6135429 -66018453 - AluSx SINE Alu -13 299 1 402 238 65 138 chr20 6135429 6135568 -66018314 - MIR SINE MIR -96 166 49 1222 186 79 52 chr20 6135583 6135873 -66018009 - AluJo SINE Alu -14 298 1 225 214 0 114 chr20 6136177 6136247 -66017635 + AluJb SINE Alu 1 62 -240 1954 57 0 42 chr20 6136249 6136512 -66017370 - AluY SINE Alu -4 307 56 1561 141 8 16 chr20 6136514 6136762 -66017120 + AluJb SINE Alu 54 299 -13 1959 142 3 0 chr20 6137061 6137357 -66016525 + AluSx SINE Alu 1 297 -15 2133 125 3 0 chr20 6138107 6138418 -66015464 - AluSx SINE Alu 0 312 1 926 203 0 0 chr20 6139394 6139552 -66014330 + FRAM SINE Alu 3 160 -6 2022 113 0 3 chr20 6139627 6139919 -66013963 - AluSx SINE Alu -21 291 1 2077 116 3 0 chr20 6141361 6141664 -66012218 - AluSx SINE Alu -8 304 1 2227 85 10 3 chr20 6142010 6142316 -66011566 + AluSx SINE Alu 1 308 -4 285 313 49 12 chr20 6142329 6142411 -66011471 - MIR SINE MIR -55 153 68 21 36 0 0 chr20 6142552 6142580 -66011302 + AT_rich Low_complexity Low_complexity 1 28 0 2469 48 3 0 chr20 6142580 6142890 -66010992 - AluY SINE Alu 0 311 1 523 299 62 22 chr20 6143375 6143599 -66010283 - MIR SINE MIR -12 250 18 2310 93 0 0 chr20 6143654 6143954 -66009928 + AluSx SINE Alu 1 300 -12 3259 94 11 18 chr20 6144170 6144435 -66009447 + MER39B LTR ERV1 1 263 -390 1692 174 13 19 chr20 6144435 6144746 -66009136 + AluJo SINE Alu 1 309 -3 3259 94 11 18 chr20 6144746 6144937 -66008945 + MER39B LTR ERV1 263 454 -199 460 215 14 93 chr20 6144943 6145105 -66008777 - L1MDb LINE L1 -5753 656 452 1114 138 64 15 chr20 6145125 6145328 -66008554 + MER39B LTR ERV1 441 653 0 296 157 20 0 chr20 6145801 6145852 -66008030 + L2 LINE L2 3221 3272 0 1895 114 26 19 chr20 6146991 6147298 -66006584 + AluSx SINE Alu 2 310 -2 2256 103 0 0 chr20 6147435 6147735 -66006147 + AluSq SINE Alu 1 300 -13 4600 193 103 29 chr20 6147755 6148588 -66005294 + L1MDb LINE L1 3 773 -5636 2151 101 0 3 chr20 6148588 6148894 -66004988 - AluSx SINE Alu -7 305 1 4600 193 103 29 chr20 6148894 6149021 -66004861 + L1MDb LINE L1 773 889 -5520 1622 189 0 0 chr20 6149021 6149302 -66004580 + AluJo SINE Alu 1 281 -31 4600 193 103 29 chr20 6149302 6149427 -66004455 + L1MDb LINE L1 889 1003 -5406 1843 145 7 3 chr20 6149427 6149731 -66004151 + AluJb SINE Alu 5 309 -3 4600 193 103 29 chr20 6149731 6149760 -66004122 + L1MDb LINE L1 1003 1202 -5207 876 188 4 5 chr20 6149763 6149954 -66003928 + L1M4 LINE L1 5127 5316 -839 2863 176 33 58 chr20 6149962 6150548 -66003334 - L1M3 LINE L1 -634 5537 4938 1750 128 0 0 chr20 6150548 6150806 -66003076 - AluSx SINE Alu 0 312 55 2863 176 33 58 chr20 6150806 6150838 -66003044 - L1M3 LINE L1 -1233 4938 4907 1847 126 0 4 chr20 6150838 6151115 -66002767 - AluSx SINE Alu -36 276 1 2863 176 33 58 chr20 6151115 6151396 -66002486 - L1M3 LINE L1 -1264 4907 4666 2010 109 7 7 chr20 6151876 6152150 -66001732 - AluSq SINE Alu -39 274 1 646 229 6 59 chr20 6152227 6152397 -66001485 + MIR SINE MIR 32 192 -70 2162 121 0 0 chr20 6153097 6153408 -66000474 + AluSx SINE Alu 1 311 0 2250 116 0 10 chr20 6153455 6153765 -66000117 + AluSx SINE Alu 1 307 -5 2555 50 0 35 chr20 6153840 6154157 -65999725 + AluY SINE Alu 1 306 -5 2073 139 0 7 chr20 6154685 6154988 -65998894 + AluJb SINE Alu 1 301 -11 213 203 47 31 chr20 6155300 6155364 -65998518 + GA-rich Low_complexity Low_complexity 4 68 0 1873 166 0 7 chr20 6155419 6155721 -65998161 + AluJo SINE Alu 1 300 -12 965 218 95 93 chr20 6156072 6156445 -65997437 - MLT1H1 LTR MaLR 0 555 184 2446 74 7 0 chr20 6156445 6156742 -65997140 - AluY SINE Alu -12 299 1 965 218 95 93 chr20 6156742 6156753 -65997129 - MLT1H1 LTR MaLR -371 184 175 2164 68 0 4 chr20 6156753 6157018 -65996864 - AluY SINE Alu -7 304 41 965 218 95 93 chr20 6157018 6157042 -65996840 - MLT1H1 LTR MaLR -380 175 153 1902 136 0 60 chr20 6157042 6157358 -65996524 + AluJb SINE Alu 1 297 -15 965 218 95 93 chr20 6157358 6157388 -65996494 - MLT1H1 LTR MaLR -402 153 114 1753 176 0 40 chr20 6157430 6157754 -65996128 - AluJb SINE Alu -1 311 1 301 189 37 0 chr20 6157761 6157825 -65996057 - MLT1H LTR MaLR -409 140 1 1174 145 34 24 chr20 6158144 6158351 -65995531 + MER20 DNA MER1_type 1 209 -10 23 33 0 0 chr20 6158521 6158551 -65995331 + AT_rich Low_complexity Low_complexity 1 30 0 2138 105 27 0 chr20 6158552 6158846 -65995036 + AluSx SINE Alu 1 302 -10 201 303 0 0 chr20 6158945 6159011 -65994871 + (TATG)n Simple_repeat Simple_repeat 2 67 0 335 229 60 0 chr20 6159079 6159162 -65994720 - MLT1I LTR MaLR -8 401 314 2233 115 7 0 chr20 6159212 6159516 -65994366 - AluSq SINE Alu -7 306 1 718 279 32 9 chr20 6160487 6160706 -65993176 + MIR SINE MIR 35 258 -4 192 152 0 0 chr20 6160748 6160781 -65993101 + CT-rich Low_complexity Low_complexity 4 36 0 1058 161 8 3 chr20 6160782 6161021 -65992861 - AluJb SINE Alu -5 307 2 1852 161 16 26 chr20 6161298 6161609 -65992273 - AluJo SINE Alu -4 308 1 2348 93 0 16 chr20 6161729 6162041 -65991841 + AluSc SINE Alu 1 307 -2 1697 132 0 13 chr20 6162169 6162404 -65991478 + AluSx SINE Alu 1 232 -80 2142 99 4 0 chr20 6163310 6163582 -65990300 - AluSp SINE Alu -25 288 16 2177 128 0 0 chr20 6163743 6164041 -65989841 - AluSx SINE Alu -14 298 1 764 207 0 0 chr20 6164170 6164305 -65989577 - AluJo SINE Alu -177 135 1 344 118 59 12 chr20 6165434 6165519 -65988363 + CT-rich Low_complexity Low_complexity 4 92 0 1224 193 57 11 chr20 6165520 6165784 -65988098 - AluJo SINE Alu -8 304 29 1981 125 50 0 chr20 6166140 6166420 -65987462 + AluSg SINE Alu 1 294 -16 299 274 0 12 chr20 6166490 6166574 -65987308 + (CATA)n Simple_repeat Simple_repeat 4 86 0 566 250 83 43 chr20 6166588 6166848 -65987034 - L1ME1 LINE L1 -229 5937 5667 937 161 73 69 chr20 6167797 6168015 -65985867 + MER20 DNA MER1_type 1 219 0 2354 95 0 0 chr20 6168117 6168412 -65985470 + AluSg SINE Alu 1 295 -15 226 318 155 20 chr20 6168499 6168647 -65985235 + MIR3 SINE MIR 34 201 -7 1864 137 41 20 chr20 6168752 6169044 -65984838 + AluSx SINE Alu 1 298 -14 1919 161 0 3 chr20 6169713 6170011 -65983871 + AluJo SINE Alu 1 297 -15 547 262 43 0 chr20 6170032 6170173 -65983709 + MIR SINE MIR 57 203 -59 318 106 0 0 chr20 6170195 6170242 -65983640 + (T)n Simple_repeat Simple_repeat 1 47 0 395 186 39 20 chr20 6170891 6170993 -65982889 - L2 LINE L2 -1 3312 3209 1988 161 0 3 chr20 6171005 6171316 -65982566 - AluJb SINE Alu -2 310 1 2132 115 3 7 chr20 6171346 6171641 -65982241 + AluSx SINE Alu 1 294 -18 2254 112 0 10 chr20 6172082 6172396 -65981486 - AluJb SINE Alu -1 311 1 2005 125 33 10 chr20 6172789 6173093 -65980789 - AluJb SINE Alu -1 311 1 702 225 30 6 chr20 6173316 6173485 -65980397 - MER5B DNA MER1_type -5 173 1 197 274 245 29 chr20 6173493 6173595 -65980287 - MER5A DNA MER1_type 0 189 66 806 223 96 5 chr20 6173610 6173807 -65980075 + MER58C DNA MER1_type 1 215 0 2080 164 0 0 chr20 6173941 6174251 -65979631 + AluSx SINE Alu 3 312 0 27 62 0 0 chr20 6174323 6174371 -65979511 + AT_rich Low_complexity Low_complexity 1 48 0 347 322 27 34 chr20 6174648 6174797 -65979085 - MIR3 SINE MIR -43 165 18 975 244 22 32 chr20 6174899 6174928 -65978954 - L1MEc LINE L1 -5414 982 954 1979 137 10 7 chr20 6174928 6175235 -65978647 + AluJb SINE Alu 1 308 -4 975 244 22 32 chr20 6175235 6175521 -65978361 - L1MEc LINE L1 -5442 954 670 351 0 0 0 chr20 6175535 6175574 -65978308 + (TC)n Simple_repeat Simple_repeat 2 40 0 * 369 0 0 0 chr20 6175573 6175614 -65978268 + (TG)n Simple_repeat Simple_repeat 2 42 0 248 121 0 0 chr20 6175614 6175647 -65978235 - Alu SINE Alu -267 33 1 306 325 16 8 chr20 6175699 6175822 -65978060 - L1MEc LINE L1 -5775 621 498 2189 103 37 0 chr20 6176216 6176516 -65977366 - AluSx SINE Alu -1 311 1 2229 102 22 140 chr20 6176750 6177004 -65976878 - LTR45B LTR ERV1 -91 398 218 2137 131 3 0 chr20 6177004 6177302 -65976580 - AluSx SINE Alu -13 299 1 2229 102 22 140 chr20 6177302 6177497 -65976385 - LTR45B LTR ERV1 -271 218 2 1906 162 0 7 chr20 6177680 6177983 -65975899 + AluJo SINE Alu 1 301 -11 2147 100 19 26 chr20 6178075 6178386 -65975496 - AluSx SINE Alu -3 309 1 475 244 43 0 chr20 6178540 6178655 -65975227 - L2 LINE L2 -5 3267 3148 2215 88 3 11 chr20 6179368 6179676 -65974206 + AluSx SINE Alu 1 306 0 519 204 0 0 chr20 6179758 6179856 -65974026 - MLT1F LTR MaLR -59 508 411 743 283 57 32 chr20 6179911 6180190 -65973692 - MLT1F LTR MaLR -256 286 1 2203 107 0 3 chr20 6180316 6180606 -65973276 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr20 6180606 6180630 -65973252 + AT_rich Low_complexity Low_complexity 1 24 0 201 152 0 0 chr20 6180665 6180698 -65973184 + (TG)n Simple_repeat Simple_repeat 2 34 0 1451 231 49 75 chr20 6180774 6181402 -65972480 + L2 LINE L2 1501 2112 -1202 630 171 120 8 chr20 6181444 6181561 -65972321 - AluSq/x SINE Alu -181 132 3 2309 115 3 0 chr20 6181576 6181888 -65971994 - AluSq SINE Alu 0 313 1 559 108 0 0 chr20 6181888 6181962 -65971920 + MER30 DNA MER1_type 126 199 -31 1231 280 119 8 chr20 6182000 6182708 -65971174 + L2 LINE L2 2522 3313 0 837 203 6 6 chr20 6183735 6183893 -65969989 + FRAM SINE Alu 1 158 -8 631 263 101 10 chr20 6184777 6184986 -65968896 + MIR SINE MIR 2 229 -33 595 240 101 35 chr20 6185174 6185607 -65968275 - LTR33 LTR ERVL 0 521 1 374 326 61 0 chr20 6186354 6186501 -65967381 + L2 LINE L2 3117 3272 0 1783 157 3 14 chr20 6187004 6187316 -65966566 - AluJo SINE Alu 0 309 1 1632 222 150 12 chr20 6188219 6188538 -65965344 + L1ME3A LINE L1 5583 5857 -313 2382 78 3 29 chr20 6188538 6188847 -65965035 + AluSp SINE Alu 1 301 -12 1632 222 150 12 chr20 6188847 6189026 -65964856 + L1ME3A LINE L1 5857 6150 -20 30 0 0 0 chr20 6189062 6189092 -65964790 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr20 6189131 6189160 -65964722 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 6189868 6189890 -65963992 + (TC)n Simple_repeat Simple_repeat 1 22 0 354 215 70 82 chr20 6189902 6190060 -65963822 - L1ME4a LINE L1 -24 6097 5942 1766 172 24 0 chr20 6190085 6190381 -65963501 - AluSx SINE Alu -9 303 1 841 181 0 0 chr20 6190615 6190742 -65963140 - FLAM_A SINE Alu -6 127 1 298 146 0 36 chr20 6190882 6190989 -65962893 + L1PA12 LINE L1 6113 6217 0 551 80 60 50 chr20 6191389 6191489 -65962393 - L1PA15 LINE L1 -1 6164 6064 528 140 0 0 chr20 6191756 6191863 -65962019 + (GA)n Simple_repeat Simple_repeat 2 108 0 192 158 0 0 chr20 6191912 6191950 -65961932 + GA-rich Low_complexity Low_complexity 2 39 0 2083 166 46 3 chr20 6192834 6193184 -65960698 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 6194605 6194807 -65959075 + L2 LINE L2 2842 3069 -244 692 254 61 4 chr20 6194861 6195089 -65958793 + HAL1 LINE L1 727 967 -1540 275 225 12 25 chr20 6195182 6195262 -65958620 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 6195348 6195434 -65958448 - Tigger2 DNA MER2_type 0 2718 2654 2866 62 3 11 chr20 6195434 6195806 -65958076 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 6195806 6195890 -65957992 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 6195889 6196097 -65957785 - Tigger2 DNA MER2_type -2508 210 1 836 251 75 61 chr20 6196101 6196591 -65957291 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 6196619 6196946 -65956936 + AluSx SINE Alu 1 308 -4 571 145 8 8 chr20 6197572 6197689 -65956193 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 515 170 18 45 chr20 6198302 6198414 -65955468 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 6198809 6198968 -65954914 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 6198975 6199044 -65954838 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 6199142 6199170 -65954712 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 6199228 6199290 -65954592 + MER5B DNA MER1_type 17 76 -102 297 0 0 0 chr20 6199311 6199344 -65954538 + (TG)n Simple_repeat Simple_repeat 1 33 0 596 187 0 41 chr20 6199369 6199492 -65954390 - L1ME3 LINE L1 0 6162 6045 2224 80 25 0 chr20 6200236 6200511 -65953371 - AluY SINE Alu -29 282 1 232 190 0 52 chr20 6200511 6200569 -65953313 + AluSg/x SINE Alu 110 164 -138 765 152 8 0 chr20 6200583 6200708 -65953174 + L1PB4 LINE L1 6031 6156 0 2326 91 10 0 chr20 6200711 6201007 -65952875 + AluSg SINE Alu 1 299 -11 954 183 0 0 chr20 6201007 6201160 -65952722 + AluJo/FRAM SINE Alu 134 286 -26 1075 233 24 51 chr20 6201270 6201562 -65952320 + MLT1B LTR MaLR 107 390 0 1026 133 0 0 chr20 6202051 6202201 -65951681 + AluSp/q SINE Alu 157 306 -7 1244 163 124 35 chr20 6202343 6202455 -65951427 + AluSq SINE Alu 1 102 -211 279 0 0 0 chr20 6202455 6202486 -65951396 + (TC)n Simple_repeat Simple_repeat 2 32 0 1244 163 124 35 chr20 6202486 6202655 -65951227 + AluSq SINE Alu 102 307 -6 841 190 8 99 chr20 6202602 6202844 -65951038 + AluJo SINE Alu 88 307 -5 2166 125 0 19 chr20 6203070 6203383 -65950499 - AluSx SINE Alu -3 309 3 1717 175 0 20 chr20 6203387 6203690 -65950192 - AluJb SINE Alu -15 297 1 2121 79 0 4 chr20 6204281 6204558 -65949324 + AluSc SINE Alu 1 276 -33 2356 57 0 7 chr20 6205034 6205333 -65948549 - AluY SINE Alu -14 297 1 295 222 11 67 chr20 6205690 6205780 -65948102 - MLT1H LTR MaLR -60 489 405 758 250 10 47 chr20 6205783 6205975 -65947907 + MLT1E2 LTR MaLR 2 186 -440 522 181 0 0 chr20 6205979 6206062 -65947820 + FLAM_C SINE Alu 36 118 -25 949 211 64 18 chr20 6206063 6206281 -65947601 + MLT1E2 LTR MaLR 232 459 -167 1554 178 87 0 chr20 6206283 6206684 -65947198 - L1M3 LINE L1 -736 5447 5025 265 321 28 0 chr20 6206767 6206876 -65947006 + MLT1H LTR MaLR 33 144 -405 * 893 276 64 24 chr20 6206875 6207168 -65946714 + MLT1H LTR MaLR 20 403 -146 1068 234 103 0 chr20 6207279 6207561 -65946321 - L2 LINE L2 -661 2653 2343 302 79 0 0 chr20 6208206 6208244 -65945638 - Alu SINE Alu -10 290 253 574 190 0 0 chr20 6208244 6208344 -65945538 + AluSg/x SINE Alu 206 305 -7 2475 58 0 3 chr20 6208959 6209268 -65944614 + AluY SINE Alu 2 309 -2 180 0 0 0 chr20 6209608 6209628 -65944254 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1983 119 14 0 chr20 6209628 6209913 -65943969 - AluSx SINE Alu -23 289 1 2387 61 0 3 chr20 6210016 6210313 -65943569 - AluY SINE Alu -15 296 1 2085 103 3 7 chr20 6210349 6210666 -65943216 + AluSp SINE Alu 1 313 0 1708 150 58 69 chr20 6210673 6211052 -65942830 - THE1C LTR MaLR 0 375 1 2165 64 0 3 chr20 6211059 6211470 -65942412 - AluY SINE Alu 0 410 1 383 227 47 16 chr20 6211521 6211649 -65942233 + L1ME4a LINE L1 5969 6100 -21 1618 176 17 10 chr20 6211866 6212168 -65941714 - AluJo SINE Alu -8 304 1 513 265 78 86 chr20 6212216 6212783 -65941099 + L1ME LINE L1 5256 5817 -345 627 289 0 60 chr20 6212854 6213022 -65940860 + MIR SINE MIR 44 198 -64 1776 166 3 13 chr20 6213022 6213329 -65940553 - AluJb SINE Alu -8 304 1 627 289 0 60 chr20 6213329 6213378 -65940504 + MIR SINE MIR 198 248 -14 276 149 0 0 chr20 6213662 6213709 -65940173 + (CA)n Simple_repeat Simple_repeat 1 47 0 1203 187 26 37 chr20 6214102 6214370 -65939512 - AluJo SINE Alu -47 265 1 22 0 0 0 chr20 6214535 6214557 -65939325 + AT_rich Low_complexity Low_complexity 1 22 0 2059 124 0 3 chr20 6214557 6214856 -65939026 + AluSx SINE Alu 1 298 -14 27 29 0 0 chr20 6214958 6214992 -65938890 + AT_rich Low_complexity Low_complexity 1 34 0 2043 119 0 0 chr20 6214994 6215287 -65938595 + AluSx SINE Alu 1 293 -19 837 144 0 43 chr20 6215442 6215581 -65938301 - FLAM_C SINE Alu 0 133 1 738 269 82 32 chr20 6215621 6216053 -65937829 - LTR33 LTR ERVL 0 521 29 2066 123 3 0 chr20 6216142 6216442 -65937440 - AluSq SINE Alu -12 301 1 485 285 29 38 chr20 6216476 6216586 -65937296 - L1MC/D LINE L1 -551 5613 5632 1920 145 0 25 chr20 6216586 6216904 -65936978 + AluSx SINE Alu 1 310 -2 485 285 29 38 chr20 6216904 6217126 -65936756 - L1MC/D LINE L1 -531 5633 5410 2129 152 16 45 chr20 6217787 6218007 -65935875 - MLT1A1 LTR MaLR 0 365 159 2404 85 0 0 chr20 6218007 6218314 -65935568 - AluSp SINE Alu -6 307 1 2129 152 16 45 chr20 6218314 6218469 -65935413 - MLT1A1 LTR MaLR -206 159 1 2207 102 0 16 chr20 6219020 6219335 -65934547 - AluSx SINE Alu -2 310 1 1965 136 0 10 chr20 6219335 6219643 -65934239 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 6219652 6219675 -65934207 + AT_rich Low_complexity Low_complexity 1 23 0 1764 148 44 7 chr20 6219933 6220231 -65933651 - AluJb SINE Alu 0 312 4 218 362 109 7 chr20 6220307 6220445 -65933437 - L2 LINE L2 -5 3267 3116 703 293 93 42 chr20 6220500 6220909 -65932973 - MLT1H LTR MaLR -5 590 30 339 136 0 0 chr20 6221041 6221100 -65932782 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 1445 115 18 142 chr20 6221101 6221275 -65932607 - AluJo SINE Alu -23 289 174 1554 181 32 3 chr20 6221275 6221557 -65932325 + AluJb SINE Alu 3 292 -20 1445 115 18 142 chr20 6221557 6221712 -65932170 - AluJo SINE Alu -138 174 1 2050 122 0 3 chr20 6221906 6222210 -65931672 + AluSx SINE Alu 1 303 -9 2117 39 0 12 chr20 6222340 6222598 -65931284 - AluY SINE Alu -16 295 41 812 127 8 45 chr20 6222877 6223011 -65930871 - FLAM_C SINE Alu -4 129 1 414 57 0 0 chr20 6223114 6223167 -65930715 + (TATG)n Simple_repeat Simple_repeat 2 54 0 682 211 53 132 chr20 6223227 6223389 -65930493 - MLT1I LTR MaLR -98 311 183 1840 131 6 35 chr20 6223389 6223701 -65930181 + AluSx SINE Alu 1 303 -9 682 211 53 132 chr20 6223701 6223842 -65930040 - MLT1I LTR MaLR -226 183 32 564 243 79 79 chr20 6224033 6224192 -65929690 + MIR SINE MIR 44 202 -60 852 139 106 101 chr20 6224192 6224308 -65929574 + MER3 DNA MER1_type 1 120 -89 1890 94 0 8 chr20 6224308 6224575 -65929307 - AluSx SINE Alu -45 267 3 852 139 106 101 chr20 6224575 6224666 -65929216 + MER3 DNA MER1_type 120 209 0 564 243 79 79 chr20 6224666 6224678 -65929204 + MIR SINE MIR 202 213 -49 1567 202 10 0 chr20 6224678 6224975 -65928907 + AluJb SINE Alu 1 300 -12 564 243 79 79 chr20 6224975 6225016 -65928866 + MIR SINE MIR 212 257 -5 1473 184 112 90 chr20 6225440 6225717 -65928165 - MLT1C LTR MaLR 0 467 175 2165 111 0 10 chr20 6225717 6226024 -65927858 - AluJb SINE Alu -8 304 1 1473 184 112 90 chr20 6226024 6226203 -65927679 - MLT1C LTR MaLR -292 175 1 293 125 42 0 chr20 6226513 6226561 -65927321 + MLT1K LTR MaLR 539 588 0 753 235 45 71 chr20 6226854 6227263 -65926619 + LTR16C LTR ERVL 100 456 -1 364 217 43 52 chr20 6227498 6227566 -65926316 - L1ME4a LINE L1 0 6121 6053 1993 123 7 3 chr20 6227566 6227866 -65926016 + AluSx SINE Alu 1 301 -11 364 217 43 52 chr20 6227866 6227912 -65925970 - L1ME4a LINE L1 -68 6053 6008 1619 145 14 37 chr20 6228512 6228808 -65925074 + AluJb SINE Alu 1 289 -23 1910 204 78 43 chr20 6228816 6229305 -65924577 + MLT1E2 LTR MaLR 114 619 -7 1256 270 62 47 chr20 6229444 6229577 -65924305 - LTR16C LTR ERVL -8 483 353 2057 101 7 7 chr20 6229577 6229873 -65924009 + AluSq SINE Alu 7 302 -11 1870 140 0 23 chr20 6229881 6230189 -65923693 + AluJb SINE Alu 1 301 -11 1256 270 62 47 chr20 6230189 6230517 -65923365 - LTR16C LTR ERVL -144 347 6 574 288 66 26 chr20 6230620 6230786 -65923096 + MIR SINE MIR 13 193 -69 2027 108 0 11 chr20 6230786 6231130 -65922752 - AluSx SINE Alu 0 341 1 574 288 66 26 chr20 6231130 6231188 -65922694 + MIR SINE MIR 193 247 -15 1403 154 32 43 chr20 6231374 6231654 -65922228 + AluJo SINE Alu 15 291 -21 1305 93 6 0 chr20 6231689 6231861 -65922021 + AluSp SINE Alu 85 257 -56 920 228 52 40 chr20 6231962 6232234 -65921648 + Charlie4 DNA MER1_type 18 292 -1669 1725 131 0 72 chr20 6232240 6232572 -65921310 - AluSx SINE Alu 0 310 1 233 266 225 40 chr20 6232689 6232862 -65921020 - MLT1K LTR MaLR -282 306 102 1971 203 43 51 chr20 6232865 6233372 -65920510 - MLT1D LTR MaLR -2 503 1 350 171 0 13 chr20 6233787 6233863 -65920019 + CT-rich Low_complexity Low_complexity 4 78 0 1911 126 4 0 chr20 6233863 6234141 -65919741 - AluSx SINE Alu -33 279 1 444 290 0 0 chr20 6234225 6234349 -65919533 + LTR16C LTR ERVL 357 480 -11 2046 139 0 0 chr20 6234901 6235203 -65918679 + AluSx SINE Alu 1 302 -10 2130 106 0 10 chr20 6235598 6235901 -65917981 + AluSq SINE Alu 1 300 -13 2287 101 0 0 chr20 6236111 6236418 -65917464 + AluSc SINE Alu 3 309 0 1321 226 36 7 chr20 6236533 6236834 -65917048 - AluJb SINE Alu -2 310 1 210 143 0 0 chr20 6236837 6236872 -65917010 + (T)n Simple_repeat Simple_repeat 1 35 0 553 258 168 0 chr20 6236992 6237159 -65916723 - MIR SINE MIR 0 262 68 1797 145 3 11 chr20 6237358 6237641 -65916241 + AluJb SINE Alu 11 291 -21 333 68 0 0 chr20 6237668 6237712 -65916170 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 1969 152 0 3 chr20 6237715 6238025 -65915857 - AluSx SINE Alu -3 309 1 1888 132 3 3 chr20 6238196 6238483 -65915399 - AluJb SINE Alu -25 287 1 2199 105 0 0 chr20 6238498 6238792 -65915090 + AluSg SINE Alu 1 294 -16 1489 109 18 4 chr20 6239096 6239325 -65914557 - AluSg/x SINE Alu -2 310 79 11319 28 3 25 chr20 6239712 6241119 -65912763 + SVA Other Other 5 1380 -6 943 167 194 53 chr20 6241206 6241305 -65912577 + AluSg SINE Alu 1 85 -215 2049 110 3 0 chr20 6241305 6241597 -65912285 - AluSp SINE Alu -4 309 17 943 167 194 53 chr20 6241597 6241760 -65912122 + AluSg SINE Alu 85 300 0 1601 187 10 7 chr20 6242633 6242938 -65910944 - AluJo SINE Alu -6 306 1 2358 147 121 28 chr20 6243017 6243085 -65910797 - MLT1D LTR MaLR 0 505 445 2014 108 3 11 chr20 6243085 6243363 -65910519 + AluSc SINE Alu 1 278 -31 327 25 0 0 chr20 6243363 6243403 -65910479 + (CA)n Simple_repeat Simple_repeat 1 40 0 2358 147 121 28 chr20 6243411 6243804 -65910078 - MLT1D LTR MaLR -60 445 1 1883 147 19 3 chr20 6243828 6244135 -65909747 + AluJb SINE Alu 1 312 0 781 296 71 24 chr20 6244259 6244512 -65909370 + LTR16C LTR ERVL 42 306 -185 857 122 0 8 chr20 6244513 6244644 -65909238 + FLAM_C SINE Alu 1 130 -13 738 240 6 34 chr20 6244675 6244854 -65909028 + LTR16C LTR ERVL 313 486 -5 327 285 50 13 chr20 6244860 6244969 -65908913 - MIR SINE MIR -102 106 8 2229 96 0 3 chr20 6245572 6245884 -65907998 - AluSq SINE Alu -2 311 1 1482 134 22 109 chr20 6245993 6246314 -65907568 - AluJb SINE Alu -11 301 9 604 163 0 0 chr20 6246319 6246411 -65907471 - AluJo SINE Alu -20 292 201 * 789 146 7 35 chr20 6246407 6246551 -65907331 - AluJo SINE Alu -170 142 3 1754 158 0 26 chr20 6247211 6247514 -65906368 - AluJo SINE Alu -13 299 5 2099 110 3 0 chr20 6247533 6247832 -65906050 - AluSx SINE Alu -10 302 3 1451 189 0 25 chr20 6248343 6248673 -65905209 + AluJo SINE Alu 9 331 0 691 182 0 0 chr20 6248687 6248797 -65905085 + FLAM_C SINE Alu 2 111 -32 453 19 0 0 chr20 6248804 6248858 -65905024 + (TAA)n Simple_repeat Simple_repeat 1 54 0 845 111 0 32 chr20 6249841 6249967 -65903915 + FLAM_C SINE Alu 2 123 -10 800 76 0 0 chr20 6249971 6250076 -65903806 + AluY SINE Alu 194 298 -13 2176 95 0 0 chr20 6250082 6250367 -65903515 + AluSg SINE Alu 1 285 -25 288 77 0 0 chr20 6250367 6250406 -65903476 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1857 160 0 0 chr20 6250522 6250822 -65903060 - AluSx SINE Alu -12 300 1 643 291 62 55 chr20 6250850 6251573 -65902309 - L1MEd LINE L1 -4579 1731 971 934 219 109 29 chr20 6251573 6251847 -65902035 + MLT1A2 LTR MaLR 1 296 -78 1565 164 20 40 chr20 6251907 6252211 -65901671 + AluSx SINE Alu 1 298 -14 1730 165 13 3 chr20 6252259 6252609 -65901273 - AluJb SINE Alu 0 353 1 318 271 121 7 chr20 6253341 6253481 -65900401 + L1ME LINE L1 5425 5580 -586 988 205 20 94 chr20 6253767 6254065 -65899817 - MLT1A2 LTR MaLR 0 374 99 1883 106 93 130 chr20 6254068 6254530 -65899352 - Tigger2 DNA MER2_type -3 2715 2271 374 194 0 0 chr20 6254514 6254586 -65899296 - Tigger2 DNA MER2_type -2646 72 1 * 530 268 121 17 chr20 6254695 6254926 -65898956 + LTR16C LTR ERVL 223 477 -14 1968 164 22 43 chr20 6254983 6255128 -65898754 + MLT1A1 LTR MaLR 1 148 -217 1942 154 3 13 chr20 6255128 6255434 -65898448 - AluJb SINE Alu -9 303 1 1968 164 22 43 chr20 6255434 6255659 -65898223 + MLT1A1 LTR MaLR 148 363 -2 2632 65 0 0 chr20 6256067 6256373 -65897509 - AluY SINE Alu -5 306 1 1808 172 30 3 chr20 6256389 6256691 -65897191 - AluSx SINE Alu -2 310 1 1600 130 41 30 chr20 6256889 6257158 -65896724 - AluJb SINE Alu -39 273 2 344 61 0 0 chr20 6257158 6257207 -65896675 + AluSp/q SINE Alu 248 296 -7 1212 292 76 4 chr20 6257861 6258334 -65895548 - LTR33 LTR ERVL -14 507 1 363 127 0 0 chr20 6258598 6258653 -65895229 - MER20 DNA MER1_type -2 217 163 473 282 56 52 chr20 6258708 6258921 -65894961 - MLT1H LTR MaLR -262 287 74 2311 106 3 0 chr20 6259579 6259882 -65894000 + AluSc SINE Alu 1 304 -5 1040 128 37 136 chr20 6259882 6260118 -65893764 - AluJb SINE Alu -23 289 76 2045 109 26 22 chr20 6260127 6260438 -65893444 + AluSx SINE Alu 1 312 0 295 195 0 98 chr20 6260465 6260547 -65893335 - AluJb SINE Alu -223 79 6 923 215 36 10 chr20 6260574 6260769 -65893113 + MIR SINE MIR 12 211 -51 1866 154 0 17 chr20 6260769 6261061 -65892821 + AluJb SINE Alu 1 287 -25 2247 117 0 0 chr20 6261136 6261435 -65892447 - AluSx SINE Alu -13 299 1 29 59 0 15 chr20 6261878 6261916 -65891966 + AT_rich Low_complexity Low_complexity 1 39 -28 2461 84 0 3 chr20 6261916 6262224 -65891658 + AluSg1 SINE Alu 1 307 -2 29 59 0 15 chr20 6262224 6262253 -65891629 + AT_rich Low_complexity Low_complexity 39 67 0 1940 144 7 7 chr20 6262332 6262623 -65891259 + AluJb SINE Alu 13 303 -9 2366 113 0 0 chr20 6262706 6263008 -65890874 - AluSg SINE Alu -8 302 1 2343 127 0 0 chr20 6263667 6263975 -65889907 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr20 6264058 6264080 -65889802 + AT_rich Low_complexity Low_complexity 1 22 0 1946 162 7 7 chr20 6264092 6264400 -65889482 + AluJb SINE Alu 1 308 -4 692 213 24 0 chr20 6264419 6264546 -65889336 + FLAM_A SINE Alu 1 130 -3 2361 97 0 7 chr20 6264546 6264846 -65889036 - AluSq SINE Alu -15 298 1 2429 87 0 22 chr20 6264950 6265261 -65888621 + AluSc SINE Alu 1 304 -5 1243 245 122 57 chr20 6265296 6265855 -65888027 - MLT1G1 LTR MaLR 0 595 1 1262 186 21 0 chr20 6266598 6266835 -65887047 + MLT1D LTR MaLR 1 242 -263 223 164 33 0 chr20 6266846 6266907 -65886975 + GA-rich Low_complexity Low_complexity 2 64 0 21 36 0 0 chr20 6266975 6267003 -65886879 + AT_rich Low_complexity Low_complexity 1 28 0 1990 74 82 0 chr20 6267004 6267260 -65886622 - AluSp SINE Alu -14 299 23 401 109 0 0 chr20 6267260 6267315 -65886567 - Alu SINE Alu -254 56 2 1905 143 20 3 chr20 6267315 6267608 -65886274 - AluJo SINE Alu -14 298 1 480 128 20 4 chr20 6267608 6267759 -65886123 + MLT1D LTR MaLR 295 505 0 1976 138 7 10 chr20 6268115 6268405 -65885477 - AluJb SINE Alu -22 290 2 1493 170 9 88 chr20 6268418 6268736 -65885146 - AluJb SINE Alu -19 293 1 324 162 59 0 chr20 6269087 6269155 -65884727 + LTR16C LTR ERVL 420 491 0 2105 119 13 44 chr20 6269275 6269593 -65884289 - AluSx SINE Alu -4 308 1 192 111 0 0 chr20 6269754 6269790 -65884092 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 255 294 261 0 chr20 6271166 6271285 -65882597 - L2 LINE L2 0 3313 3164 1385 132 38 9 chr20 6271296 6271509 -65882373 + MER20 DNA MER1_type 1 219 0 1186 186 0 0 chr20 6271517 6271705 -65882177 + MER5A DNA MER1_type 1 188 -1 333 223 48 117 chr20 6271790 6271842 -65882040 + MER5A DNA MER1_type 25 68 -121 2524 77 0 0 chr20 6271842 6272153 -65881729 + AluY SINE Alu 1 311 0 333 223 48 117 chr20 6272153 6272203 -65881679 + MER5A DNA MER1_type 68 120 -69 2278 118 7 0 chr20 6272264 6272570 -65881312 + AluSx SINE Alu 1 308 -4 1061 263 84 46 chr20 6273010 6273425 -65880457 + MLT1J LTR MaLR 73 503 -8 2240 131 0 6 chr20 6273853 6274150 -65879732 + AluSx SINE Alu 1 297 -15 390 42 0 0 chr20 6274150 6274198 -65879684 + (CA)n Simple_repeat Simple_repeat 1 48 0 2240 131 0 6 chr20 6274198 6274212 -65879670 + AluSx SINE Alu 297 310 -2 374 204 11 0 chr20 6274397 6274485 -65879397 + GA-rich Low_complexity Low_complexity 3 91 0 2232 133 0 0 chr20 6274973 6275274 -65878608 + AluSx SINE Alu 1 301 -11 1391 156 60 96 chr20 6275284 6275586 -65878296 + AluJb SINE Alu 6 296 -16 517 128 13 0 chr20 6276027 6276105 -65877777 + AluS SINE Alu 221 299 -13 2107 126 7 7 chr20 6276832 6277133 -65876749 - AluSx SINE Alu -11 301 1 2225 121 0 16 chr20 6277451 6277764 -65876118 - AluSx SINE Alu -4 308 1 2366 90 0 0 chr20 6278297 6278597 -65875285 - AluY SINE Alu -11 300 1 403 226 65 40 chr20 6278630 6278754 -65875128 + MIR SINE MIR 61 187 -75 212 275 92 37 chr20 6278761 6278870 -65875012 + MIR SINE MIR 148 262 0 1775 161 18 0 chr20 6278946 6279219 -65874663 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr20 6279223 6279244 -65874638 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1939 138 7 26 chr20 6279246 6279551 -65874331 + AluSx SINE Alu 1 299 -13 1648 180 24 24 chr20 6279962 6280256 -65873626 + AluJo SINE Alu 1 294 -18 4925 146 24 53 chr20 6280360 6280691 -65873191 - L1MA8 LINE L1 -4 6287 5948 2277 125 0 0 chr20 6280691 6280995 -65872887 - AluSx SINE Alu -8 304 1 4925 146 24 53 chr20 6280995 6281231 -65872651 - L1MA8 LINE L1 -343 5948 5707 2256 135 0 0 chr20 6281231 6281542 -65872340 - AluSx SINE Alu -1 311 1 4925 146 24 53 chr20 6281542 6281799 -65872083 - L1MA8 LINE L1 -584 5707 5495 2359 98 0 13 chr20 6281799 6282114 -65871768 - AluSq SINE Alu -2 311 1 4925 146 24 53 chr20 6282114 6282319 -65871563 - L1MA8 LINE L1 -796 5495 5286 21 0 0 0 chr20 6282763 6282784 -65871098 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 6283111 6283255 -65870627 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 6283552 6283848 -65870034 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 6285724 6286012 -65867870 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 6286359 6286651 -65867231 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 6287171 6287203 -65866679 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 6287248 6288093 -65865789 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 6288111 6289054 -65864828 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 6289054 6289365 -65864517 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 6289365 6289825 -65864057 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 6289840 6289990 -65863892 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 6289990 6290042 -65863840 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 6290042 6290388 -65863494 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 6290604 6290730 -65863152 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 6291811 6292256 -65861626 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 6293038 6293098 -65860784 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 6293266 6293318 -65860564 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 6294176 6294415 -65859467 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 6294481 6294580 -65859302 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 6294738 6294832 -65859050 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 6294877 6295146 -65858736 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 6296410 6296709 -65857173 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 6297998 6298088 -65855794 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 6299314 6299421 -65854461 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 6301619 6301747 -65852135 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 6301773 6301850 -65852032 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 6301850 6302158 -65851724 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 6302158 6302214 -65851668 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 6302214 6302499 -65851383 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 6302499 6302603 -65851279 + ORSL DNA AcHobo 118 266 -9 694 153 0 30 chr20 6303768 6303829 -65850053 - L1MB7 LINE L1 -10 6174 6113 1926 120 0 57 chr20 6303829 6304155 -65849727 + AluSx SINE Alu 1 309 0 694 153 0 30 chr20 6304155 6304223 -65849659 - L1MB7 LINE L1 -71 6113 6048 452 167 0 13 chr20 6304231 6304309 -65849573 - FLAM SINE Alu -23 120 44 2477 179 42 40 chr20 6304386 6304624 -65849258 - L1MB7 LINE L1 -366 5818 5582 1720 171 54 7 chr20 6304624 6304805 -65849077 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 6304805 6304848 -65849034 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1720 171 54 7 chr20 6304848 6304964 -65848918 - AluJb SINE Alu -202 110 1 2477 179 42 40 chr20 6304964 6305419 -65848463 - L1MB7 LINE L1 -602 5582 5129 1884 136 3 39 chr20 6305419 6305727 -65848155 - AluJo SINE Alu -15 297 1 2477 179 42 40 chr20 6305727 6305761 -65848121 - L1MB7 LINE L1 -1055 5129 5097 2392 74 24 0 chr20 6305761 6306057 -65847825 + AluSp SINE Alu 1 303 -10 2477 179 42 40 chr20 6306057 6306184 -65847698 - L1MB7 LINE L1 -1087 5097 4967 871 169 0 0 chr20 6306184 6306326 -65847556 + AluJb SINE Alu 160 301 -11 1657 150 15 4 chr20 6306326 6306586 -65847296 + AluSx SINE Alu 1 263 -49 22 35 0 0 chr20 6306599 6306628 -65847254 + AT_rich Low_complexity Low_complexity 1 29 0 197 262 0 0 chr20 6307559 6307601 -65846281 + L2 LINE L2 3137 3178 -94 2408 100 7 0 chr20 6307604 6307914 -65845968 + AluSq SINE Alu 1 312 -1 251 83 0 21 chr20 6307924 6307972 -65845910 + (CAAG)n Simple_repeat Simple_repeat 2 48 0 876 140 0 22 chr20 6309719 6309855 -65844027 + AluJo/FLAM SINE Alu 1 133 -169 2282 99 3 0 chr20 6309858 6310150 -65843732 + AluSp SINE Alu 1 293 -20 526 182 141 35 chr20 6310323 6310521 -65843361 - LTR16B LTR ERVL 0 464 246 231 221 90 97 chr20 6310952 6311097 -65842785 - HAL1 LINE L1 -1 2506 2363 21 36 0 0 chr20 6312008 6312036 -65841846 + AT_rich Low_complexity Low_complexity 1 28 0 2269 113 3 0 chr20 6312249 6312560 -65841322 - AluSx SINE Alu 0 312 1 2088 128 0 13 chr20 6312569 6312873 -65841009 - AluSx SINE Alu -12 300 1 4388 52 0 0 chr20 6313530 6314065 -65839817 + L1PA5 LINE L1 3567 4101 -2045 * 8082 36 0 0 chr20 6314054 6315015 -65838867 - L1PA4 LINE L1 -892 5254 4294 7472 37 6 0 chr20 6315015 6315899 -65837983 + L1PA4 LINE L1 5257 6154 -1 30 0 0 0 chr20 6315899 6315929 -65837953 + AT_rich Low_complexity Low_complexity 1 30 0 11008 40 3 0 chr20 6315929 6318001 -65835881 + L1PA5 LINE L1 4080 6152 -2 2067 136 0 0 chr20 6318199 6318510 -65835372 + AluSp SINE Alu 4 314 0 14988 123 21 19 chr20 6318510 6319466 -65834416 + MER50-int LTR ERV1 4932 5885 -1320 2146 106 0 7 chr20 6319466 6319770 -65834112 + AluSp SINE Alu 1 302 0 14988 123 21 19 chr20 6319770 6321074 -65832808 + MER50-int LTR ERV1 5885 7197 -8 4407 137 27 16 chr20 6321074 6321777 -65832105 + MER50 LTR ERV1 1 711 -23 663 230 149 30 chr20 6321891 6322190 -65831692 + L1ME LINE L1 5485 5809 -353 1737 174 0 39 chr20 6322514 6322687 -65831195 - AluJb SINE Alu -14 298 141 2366 103 0 3 chr20 6322687 6322988 -65830894 - AluSg SINE Alu -10 300 1 1737 174 0 39 chr20 6322988 6323124 -65830758 - AluJb SINE Alu -171 141 1 1415 161 124 18 chr20 6323127 6323400 -65830482 - AluJo SINE Alu -10 302 1 22 0 0 0 chr20 6323401 6323423 -65830459 + AT_rich Low_complexity Low_complexity 1 22 0 1192 146 92 5 chr20 6323684 6323890 -65829992 + AluJb SINE Alu 87 310 -2 561 68 0 0 chr20 6323892 6323966 -65829916 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 499 218 10 0 chr20 6324168 6324269 -65829613 + FLAM_A SINE Alu 23 124 -18 2334 89 27 0 chr20 6324270 6324563 -65829319 + AluSx SINE Alu 1 301 -11 2240 79 18 0 chr20 6324591 6324910 -65828972 + AluSp SINE Alu 1 324 0 880 246 18 7 chr20 6325721 6326001 -65827881 + L1MC/D LINE L1 2805 3087 -3059 761 150 0 88 chr20 6326011 6326158 -65827724 + FLAM_C SINE Alu 10 143 0 1678 240 48 50 chr20 6326158 6326757 -65827125 + L1MC/D LINE L1 3091 3688 -2458 2184 105 3 16 chr20 6326757 6327061 -65826821 + AluSx SINE Alu 1 300 -12 1739 158 37 10 chr20 6327071 6327369 -65826513 + AluJo SINE Alu 1 306 -6 754 199 18 12 chr20 6327370 6327536 -65826346 + L1MC/D LINE L1 5599 5765 -477 225 0 0 0 chr20 6328278 6328303 -65825579 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 848 110 0 0 chr20 6328307 6328425 -65825457 - FLAM_C SINE Alu -15 118 1 241 307 52 13 chr20 6328589 6328742 -65825140 - MIR SINE MIR -39 223 65 2273 108 13 0 chr20 6329122 6329429 -65824453 - AluSp SINE Alu -2 311 1 1770 133 22 65 chr20 6329495 6329817 -65824065 - AluJo SINE Alu -4 308 1 814 147 0 0 chr20 6329855 6329971 -65823911 - AluJb SINE Alu -196 116 1 1043 296 181 21 chr20 6330157 6330975 -65822907 - L2 LINE L2 -1992 1322 374 972 182 42 0 chr20 6330982 6331174 -65822708 + Charlie5 DNA MER1_type 1 200 -2412 1875 126 3 87 chr20 6331186 6331319 -65822563 + AluJo SINE Alu 1 144 -168 1437 137 166 0 chr20 6331319 6331583 -65822299 + AluSg1 SINE Alu 1 304 0 1875 126 3 87 chr20 6331583 6331782 -65822100 + AluJo SINE Alu 144 306 -6 33 0 0 0 chr20 6332344 6332377 -65821505 + AT_rich Low_complexity Low_complexity 1 33 0 813 138 14 179 chr20 6332388 6332612 -65821270 + Charlie5 DNA MER1_type 2337 2502 -83 1495 186 4 4 chr20 6332612 6332859 -65821023 + AluJb SINE Alu 1 247 -65 813 138 14 179 chr20 6332859 6332931 -65820951 + Charlie5 DNA MER1_type 2502 2584 -1 591 268 71 20 chr20 6332935 6333189 -65820693 - L2 LINE L2 -2961 353 87 907 236 43 40 chr20 6333266 6333345 -65820537 - L2 LINE L2 -775 2539 2462 2489 88 0 0 chr20 6333345 6333653 -65820229 + AluSx SINE Alu 1 308 -4 907 236 43 40 chr20 6333653 6333921 -65819961 - L2 LINE L2 -852 2462 2191 523 183 77 0 chr20 6334665 6334769 -65819113 + FLAM_C SINE Alu 7 118 -25 36 40 0 0 chr20 6334769 6334819 -65819063 + AT_rich Low_complexity Low_complexity 1 50 0 347 284 20 10 chr20 6334884 6334986 -65818896 - MIR SINE MIR -63 145 43 192 125 0 0 chr20 6334991 6335023 -65818859 + (T)n Simple_repeat Simple_repeat 1 32 0 308 250 160 56 chr20 6335036 6335180 -65818702 - L1MC5 LINE L1 -48 7913 7755 270 205 13 93 chr20 6335232 6335383 -65818499 - L1MC5 LINE L1 -195 7766 7628 1184 110 29 131 chr20 6335398 6335643 -65818239 - AluYb8 SINE Alu -15 303 84 755 219 35 42 chr20 6335671 6335959 -65817923 - L1MC5 LINE L1 -366 7595 7310 349 293 23 38 chr20 6336098 6336291 -65817591 - L1MC4 LINE L1 -725 7236 7068 1722 181 13 10 chr20 6336291 6336595 -65817287 + AluJb SINE Alu 2 306 -6 265 187 27 13 chr20 6336600 6336675 -65817207 + GA-rich Low_complexity Low_complexity 3 78 0 642 227 50 69 chr20 6336676 6336993 -65816889 - L1MC5 LINE L1 -887 7074 6764 2202 106 0 26 chr20 6337119 6337421 -65816461 + AluSg SINE Alu 1 294 -16 1754 166 0 7 chr20 6337433 6337716 -65816166 + AluJb SINE Alu 1 281 -31 327 169 17 0 chr20 6338288 6338347 -65815535 + FRAM/FAM SINE Alu 1 59 -107 2952 180 98 52 chr20 6338513 6339208 -65814674 + LTR8A LTR ERV1 1 727 0 2034 128 51 0 chr20 6339473 6339769 -65814113 - AluSx SINE Alu -1 311 1 1886 207 111 47 chr20 6339770 6339905 -65813977 - L1MC/D LINE L1 -743 5403 5278 904 153 70 13 chr20 6339905 6340062 -65813820 - FRAM SINE Alu 0 166 1 1886 207 111 47 chr20 6340062 6340137 -65813745 - L1MC/D LINE L1 -868 5278 5209 1986 157 7 0 chr20 6340137 6340436 -65813446 - AluJb SINE Alu -11 301 1 1886 207 111 47 chr20 6340436 6340592 -65813290 - L1MC/D LINE L1 -937 5209 5064 1361 192 130 0 chr20 6340592 6340853 -65813029 - AluJo SINE Alu -7 295 1 1886 207 111 47 chr20 6340853 6340965 -65812917 - L1MC/D LINE L1 -1082 5064 4961 2324 99 24 0 chr20 6340965 6341259 -65812623 - AluSx SINE Alu -11 301 1 1886 207 111 47 chr20 6341259 6341529 -65812353 - L1MC/D LINE L1 -1185 4961 4642 1964 76 44 0 chr20 6341537 6341786 -65812096 - AluSq SINE Alu -53 260 1 34 42 0 0 chr20 6341871 6341919 -65811963 + AT_rich Low_complexity Low_complexity 1 48 0 434 238 20 79 chr20 6341976 6342178 -65811704 - L2 LINE L2 -893 2421 2232 219 238 25 50 chr20 6343457 6343537 -65810345 - L2 LINE L2 -68 3245 3168 226 333 49 0 chr20 6344249 6344330 -65809552 - L2 LINE L2 -50 3263 3179 25 31 0 0 chr20 6346371 6346403 -65807479 + AT_rich Low_complexity Low_complexity 1 32 0 552 284 47 43 chr20 6347531 6347763 -65806119 + HAL1 LINE L1 1 233 -2274 643 152 24 32 chr20 6348615 6348740 -65805142 + AluJb SINE Alu 182 305 -7 1687 239 144 55 chr20 6348743 6348879 -65805003 + HAL1 LINE L1 971 1094 -1413 1902 141 10 13 chr20 6348879 6349192 -65804690 + AluSx SINE Alu 1 312 0 1687 239 144 55 chr20 6349192 6349890 -65803992 + HAL1 LINE L1 1094 1879 -628 351 296 77 6 chr20 6350390 6350559 -65803323 + L1ME3A LINE L1 5690 5870 -300 236 94 0 0 chr20 6350608 6350640 -65803242 + Alu SINE Alu 181 212 -91 679 101 119 0 chr20 6350642 6350751 -65803131 + AluSg/x SINE Alu 177 298 -14 414 256 68 46 chr20 6350925 6351144 -65802738 + HAL1 LINE L1 2284 2507 0 27 0 0 0 chr20 6351610 6351637 -65802245 + AT_rich Low_complexity Low_complexity 1 27 0 31 26 0 0 chr20 6351941 6351979 -65801903 + AT_rich Low_complexity Low_complexity 1 38 0 310 133 0 0 chr20 6351992 6352037 -65801845 - Alu SINE Alu -258 45 1 13685 130 52 27 chr20 6352037 6352936 -65800946 + Tigger1 DNA MER2_type 35 910 -1508 2303 78 14 0 chr20 6352936 6353103 -65800779 - AluY SINE Alu -11 300 126 189 0 0 0 chr20 6353103 6353124 -65800758 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2303 78 14 0 chr20 6353124 6353252 -65800630 - AluY SINE Alu -185 126 1 13685 130 52 27 chr20 6353252 6354227 -65799655 + Tigger1 DNA MER2_type 910 1859 -559 2134 123 10 3 chr20 6354227 6354535 -65799347 + AluSx SINE Alu 1 310 -2 1955 125 30 20 chr20 6354543 6354846 -65799036 + AluSq SINE Alu 1 306 -7 13685 130 52 27 chr20 6354846 6355186 -65798696 + Tigger1 DNA MER2_type 1865 2323 -95 2370 80 7 0 chr20 6355186 6355472 -65798410 - AluSg SINE Alu -22 288 1 13685 130 52 27 chr20 6355472 6355571 -65798311 + Tigger1 DNA MER2_type 2323 2418 0 416 223 92 159 chr20 6355700 6356014 -65797868 - L2 LINE L2 -4 3309 3017 1127 295 120 13 chr20 6356039 6356661 -65797221 - L2 LINE L2 -410 2904 2137 304 276 38 48 chr20 6356670 6356775 -65797107 - MER5B DNA MER1_type -69 109 6 1940 142 6 22 chr20 6357889 6358205 -65795677 + AluSx SINE Alu 1 311 -1 1496 192 37 0 chr20 6358280 6358551 -65795331 + AluJb SINE Alu 7 287 -25 28 48 0 0 chr20 6358552 6358594 -65795288 + AT_rich Low_complexity Low_complexity 1 42 0 395 246 80 45 chr20 6359131 6359264 -65794618 - MIR3 SINE MIR -30 178 41 523 274 22 22 chr20 6359817 6359996 -65793886 + L2 LINE L2 3135 3313 0 2011 123 7 3 chr20 6361264 6361549 -65792333 - AluSx SINE Alu -25 287 2 242 393 0 0 chr20 6361642 6361726 -65792156 + MIR3 SINE MIR 5 88 -120 2435 64 10 0 chr20 6361951 6362247 -65791635 - AluY SINE Alu -12 299 1 930 211 0 0 chr20 6362473 6362644 -65791238 - AluJb SINE Alu -8 304 134 1320 183 11 53 chr20 6363514 6363799 -65790083 + AluJb SINE Alu 1 273 -39 186 71 0 0 chr20 6363803 6363831 -65790051 + (CA)n Simple_repeat Simple_repeat 1 28 0 1503 189 17 36 chr20 6364196 6364497 -65789385 - AluJo SINE Alu -17 295 1 256 326 136 0 chr20 6365117 6365249 -65788633 - L2 LINE L2 -17 3296 3147 180 243 86 57 chr20 6365344 6365414 -65788468 - MIR SINE MIR -161 101 30 255 152 0 0 chr20 6366531 6366577 -65787305 + A-rich Low_complexity Low_complexity 1 46 0 194 61 0 30 chr20 6367199 6367232 -65786650 + (TA)n Simple_repeat Simple_repeat 1 32 0 1939 112 18 28 chr20 6367591 6367896 -65785986 + AluSx SINE Alu 1 302 0 244 155 17 17 chr20 6368049 6368107 -65785775 + CT-rich Low_complexity Low_complexity 2 59 0 24 32 0 0 chr20 6369021 6369052 -65784830 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 6369395 6369416 -65784466 + (A)n Simple_repeat Simple_repeat 1 21 0 222 37 0 0 chr20 6369881 6369908 -65783974 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2207 125 0 0 chr20 6370595 6370891 -65782991 + AluSx SINE Alu 1 296 -16 1758 171 4 0 chr20 6370911 6371174 -65782708 + AluJo SINE Alu 6 269 -43 469 218 45 26 chr20 6371335 6371491 -65782391 - MER104 DNA Tc2 -13 167 9 906 177 6 29 chr20 6371833 6372008 -65781874 - FRAM SINE Alu -9 167 1 2067 137 0 13 chr20 6372047 6372354 -65781528 - AluSx SINE Alu -9 303 1 1398 153 4 37 chr20 6372484 6372726 -65781156 + AluJb SINE Alu 63 296 -16 1740 157 14 10 chr20 6373429 6373722 -65780160 + AluJb SINE Alu 9 302 -10 275 217 61 6 chr20 6374017 6374097 -65779785 - MIR3 SINE MIR -35 173 88 324 102 0 0 chr20 6374995 6375044 -65778838 + (CA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr20 6375066 6375094 -65778788 + AT_rich Low_complexity Low_complexity 1 28 0 2128 133 0 3 chr20 6375107 6375409 -65778473 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr20 6375549 6375571 -65778311 + AT_rich Low_complexity Low_complexity 1 22 0 792 126 31 0 chr20 6375891 6376018 -65777864 + AluJ SINE Alu 1 131 -171 1509 88 0 0 chr20 6376022 6376214 -65777668 - AluSg SINE Alu -1 309 118 592 67 0 0 chr20 6376214 6376289 -65777593 - AluSg SINE Alu -234 75 1 1152 176 0 0 chr20 6376304 6376486 -65777396 + AluJ SINE Alu 131 312 0 24 60 0 30 chr20 6377850 6377875 -65776007 + AT_rich Low_complexity Low_complexity 1 25 -40 1877 149 14 0 chr20 6377875 6378164 -65775718 + AluJb SINE Alu 1 293 -19 24 60 0 30 chr20 6378164 6378205 -65775677 + AT_rich Low_complexity Low_complexity 25 65 0 2133 95 28 0 chr20 6378328 6378612 -65775270 - AluSx SINE Alu -16 296 5 355 82 0 0 chr20 6378613 6378662 -65775220 - Alu SINE Alu -251 50 2 2484 65 0 3 chr20 6379412 6379722 -65774160 + AluY SINE Alu 1 309 -2 1955 120 17 30 chr20 6379846 6380146 -65773736 - AluSx SINE Alu -16 296 1 297 0 0 0 chr20 6380783 6380816 -65773066 + (T)n Simple_repeat Simple_repeat 1 33 0 2813 3 0 10 chr20 6380871 6381185 -65772697 + AluY SINE Alu 1 311 0 2213 138 0 0 chr20 6381575 6381880 -65772002 + AluSx SINE Alu 1 305 -7 2169 94 37 3 chr20 6381921 6382220 -65771662 + AluSp SINE Alu 1 309 -4 1796 129 8 15 chr20 6382232 6382495 -65771387 + AluSq SINE Alu 1 261 -52 395 179 15 0 chr20 6382981 6383048 -65770834 - Tigger3(Golem) DNA MER2_type -1 3028 2961 501 220 0 0 chr20 6383062 6383153 -65770729 - Tigger3(Golem) DNA MER2_type -2938 91 1 204 97 0 0 chr20 6384583 6384614 -65769268 + (A)n Simple_repeat Simple_repeat 1 31 0 253 240 10 50 chr20 6386220 6386320 -65767562 - L1ME4a LINE L1 -59 6062 5967 2161 121 3 0 chr20 6386344 6386634 -65767248 - AluSg SINE Alu -19 291 1 2061 138 0 0 chr20 6387191 6387481 -65766401 + AluSx SINE Alu 1 290 -22 2312 113 0 0 chr20 6387513 6387822 -65766060 + AluSx SINE Alu 3 311 -1 2207 97 38 0 chr20 6388298 6388587 -65765295 + AluSp SINE Alu 1 300 -13 22 35 0 0 chr20 6388935 6388964 -65764918 + AT_rich Low_complexity Low_complexity 1 29 0 2172 108 3 10 chr20 6389227 6389522 -65764360 + AluSx SINE Alu 1 293 -19 353 298 43 0 chr20 6390334 6390428 -65763454 - MIR3 SINE MIR -30 178 81 222 289 126 15 chr20 6392488 6392623 -65761259 - L2 LINE L2 0 3313 3164 267 358 22 37 chr20 6392662 6392796 -65761086 - L2 LINE L2 -221 3051 2920 783 175 69 74 chr20 6393115 6393264 -65760618 + MER5A DNA MER1_type 2 151 -38 2236 84 3 14 chr20 6393264 6393560 -65760322 - AluY SINE Alu -18 293 1 783 175 69 74 chr20 6393560 6393599 -65760283 + MER5A DNA MER1_type 151 189 0 1194 151 34 0 chr20 6393719 6393925 -65759957 + Tigger1 DNA MER2_type 1 213 -2205 * 1482 138 20 0 chr20 6393923 6394169 -65759713 + Tigger1 DNA MER2_type 2003 2253 -165 601 62 0 0 chr20 6394185 6394297 -65759585 + L1PA6 LINE L1 6062 6173 0 2247 120 0 0 chr20 6394330 6394639 -65759243 + AluSg SINE Alu 2 310 0 416 288 46 20 chr20 6394850 6395003 -65758879 + MER5B DNA MER1_type 21 177 -1 1230 211 63 25 chr20 6395095 6395379 -65758503 + AluJo SINE Alu 3 297 -15 265 200 38 38 chr20 6396285 6396365 -65757517 - MER5C DNA MER1_type 0 324 245 469 229 8 34 chr20 6396414 6396532 -65757350 - MER5C DNA MER1_type -201 123 9 299 261 92 25 chr20 6396669 6396788 -65757094 - MIR3 SINE MIR -46 162 36 358 153 22 97 chr20 6397071 6397165 -65756717 + AluJo SINE Alu 48 125 -177 987 157 6 18 chr20 6397207 6397373 -65756509 + AluJo SINE Alu 118 281 -31 350 277 107 44 chr20 6397390 6397596 -65756286 + HAL1 LINE L1 2285 2503 -4 379 123 0 0 chr20 6398236 6398293 -65755589 + AluS SINE Alu 1 57 -242 1049 143 0 6 chr20 6398293 6398454 -65755428 + AluSg/x SINE Alu 142 301 -11 2078 126 7 0 chr20 6398535 6398821 -65755061 - AluSx SINE Alu -24 288 1 1686 127 3 121 chr20 6399242 6399374 -65754508 + AluSx SINE Alu 1 72 -230 1863 138 3 49 chr20 6399374 6399520 -65754362 + AluSx SINE Alu 1 127 -185 2229 97 14 0 chr20 6399520 6399809 -65754073 + AluSg SINE Alu 1 293 -17 1863 138 3 49 chr20 6399809 6399966 -65753916 + AluSx SINE Alu 127 290 -22 1686 127 3 121 chr20 6399966 6400163 -65753719 + AluSx SINE Alu 72 291 -11 788 197 56 0 chr20 6400183 6400325 -65753557 + FRAM SINE Alu 1 143 -33 2419 108 0 0 chr20 6400330 6400637 -65753245 - AluSx SINE Alu -5 307 1 331 283 177 79 chr20 6401567 6401664 -65752218 - L2 LINE L2 0 3272 3186 1976 154 0 22 chr20 6401664 6401975 -65751907 + AluSx SINE Alu 1 304 -8 2114 114 3 7 chr20 6401980 6402270 -65751612 + AluSg SINE Alu 1 289 -21 331 283 177 79 chr20 6402270 6402534 -65751348 - L2 LINE L2 -89 3183 2869 2453 92 0 0 chr20 6402712 6403015 -65750867 - AluSx SINE Alu -9 303 1 1370 196 76 11 chr20 6403628 6403743 -65750139 + AluJb SINE Alu 3 109 -203 288 0 0 0 chr20 6403743 6403775 -65750107 + (CA)n Simple_repeat Simple_repeat 2 33 0 1370 196 76 11 chr20 6403775 6403934 -65749948 + AluJb SINE Alu 109 295 -17 1803 84 9 0 chr20 6404468 6404695 -65749187 + AluSp SINE Alu 3 231 -82 832 209 65 10 chr20 6405521 6405722 -65748160 + MER20 DNA MER1_type 1 212 -7 2268 131 0 0 chr20 6405973 6406279 -65747603 + AluSx SINE Alu 1 306 -6 2183 107 45 0 chr20 6406279 6406569 -65747313 + AluSg SINE Alu 1 303 -7 1009 155 37 0 chr20 6406646 6406807 -65747075 + AluSg/x SINE Alu 137 303 -9 227 211 47 47 chr20 6409673 6409801 -65744081 + (CCCGG)n Simple_repeat Simple_repeat 2 129 0 24 53 0 0 chr20 6410004 6410042 -65743840 + GC_rich Low_complexity Low_complexity 1 38 0 2451 54 14 3 chr20 6410269 6410563 -65743319 + AluSx SINE Alu 1 297 -15 229 202 155 24 chr20 6410755 6410839 -65743043 + MER5A DNA MER1_type 11 105 -84 2293 82 0 0 chr20 6411053 6411357 -65742525 + AluSc SINE Alu 2 305 0 1905 145 20 0 chr20 6411485 6411789 -65742093 + AluSx SINE Alu 1 310 -2 191 204 68 23 chr20 6412012 6412056 -65741826 - L2 LINE L2 -2 3311 3266 2380 90 3 28 chr20 6412265 6412586 -65741296 - AluSq SINE Alu 0 313 1 1462 103 70 0 chr20 6412758 6412972 -65740910 + MER30 DNA MER1_type 2 230 0 2089 130 0 7 chr20 6413020 6413319 -65740563 + AluSc SINE Alu 1 297 -12 1717 176 19 32 chr20 6413537 6413850 -65740032 - AluJb SINE Alu -3 309 1 822 216 9 69 chr20 6414124 6414173 -65739709 + AluJb SINE Alu 82 132 -180 252 0 0 0 chr20 6414173 6414201 -65739681 + (TA)n Simple_repeat Simple_repeat 2 29 0 822 216 9 69 chr20 6414201 6414382 -65739500 + AluJb SINE Alu 132 298 -14 1991 155 0 0 chr20 6414463 6414754 -65739128 - AluSx SINE Alu -21 291 1 432 51 0 0 chr20 6414804 6414863 -65739019 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1878 169 3 0 chr20 6414863 6415147 -65738735 - AluSx SINE Alu -27 285 1 305 195 143 39 chr20 6415165 6415211 -65738671 - AluJo SINE Alu -129 173 133 339 25 0 0 chr20 6415211 6415251 -65738631 + (TG)n Simple_repeat Simple_repeat 2 41 0 305 195 143 39 chr20 6415251 6415281 -65738601 - AluJo SINE Alu -169 133 89 1781 141 72 4 chr20 6415293 6415570 -65738312 - AluJb SINE Alu -16 296 1 2479 74 3 0 chr20 6415818 6416117 -65737765 + AluSp SINE Alu 1 300 -13 2255 103 14 0 chr20 6416200 6416492 -65737390 - AluSg SINE Alu -14 296 1 2518 80 3 0 chr20 6417035 6417347 -65736535 + AluSp SINE Alu 1 313 0 1594 199 7 14 chr20 6417602 6417913 -65735969 + AluSx SINE Alu 1 309 0 1705 205 3 3 chr20 6417914 6418217 -65735665 + AluJb SINE Alu 1 303 -9 1127 188 33 0 chr20 6418220 6418433 -65735449 - LTR8A LTR ERV1 -349 378 159 225 211 0 0 chr20 6418458 6418510 -65735372 + AluJ/monomer SINE Alu 250 301 -1 2321 98 3 13 chr20 6418530 6418845 -65735037 - AluSx SINE Alu 0 312 1 2295 117 3 0 chr20 6418845 6419152 -65734730 - AluSx SINE Alu -3 309 1 2122 129 3 0 chr20 6419202 6419489 -65734393 - AluSx SINE Alu -24 288 1 1024 70 0 28 chr20 6419546 6419689 -65734193 - Alu SINE Alu 0 310 172 2421 95 0 3 chr20 6419749 6420053 -65733829 + AluSx SINE Alu 2 304 -8 2260 117 7 0 chr20 6420689 6421012 -65732870 - AluSp SINE Alu 0 325 1 182 206 159 48 chr20 6421014 6421077 -65732805 + L2 LINE L2 3171 3240 -32 2604 44 0 0 chr20 6421224 6421522 -65732360 + AluY SINE Alu 1 298 -13 1854 165 0 31 chr20 6421935 6422257 -65731625 + AluJb SINE Alu 1 312 0 1034 161 0 6 chr20 6422348 6422509 -65731373 - AluJo SINE Alu -135 177 18 2155 144 0 0 chr20 6422609 6422915 -65730967 + AluSx SINE Alu 1 306 -6 848 199 0 119 chr20 6423016 6423252 -65730630 + AluSx SINE Alu 5 212 -100 1406 121 0 0 chr20 6423334 6423516 -65730366 + AluSg/x SINE Alu 97 278 -32 189 0 0 0 chr20 6423516 6423537 -65730345 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 4561 105 38 31 chr20 6423561 6423723 -65730159 - LTR8 LTR ERV1 0 691 532 2164 109 10 23 chr20 6423723 6424027 -65729855 - AluSx SINE Alu -12 300 1 4561 105 38 31 chr20 6424027 6424550 -65729332 - LTR8 LTR ERV1 -159 532 1 2447 88 0 0 chr20 6424630 6424935 -65728947 + AluSq SINE Alu 1 305 -8 1813 180 30 10 chr20 6424943 6425248 -65728634 + AluJb SINE Alu 1 311 -1 2285 201 89 99 chr20 6425548 6426383 -65727499 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr20 6426982 6427005 -65726877 + AT_rich Low_complexity Low_complexity 1 23 0 1846 157 10 10 chr20 6427046 6427358 -65726524 - AluSx SINE Alu 0 312 1 1707 173 3 32 chr20 6427408 6427553 -65726329 + AluJo SINE Alu 1 149 -163 2055 118 3 14 chr20 6427553 6427842 -65726040 + AluSx SINE Alu 21 306 -6 1707 173 3 32 chr20 6427842 6428009 -65725873 + AluJo SINE Alu 149 304 -8 395 275 42 35 chr20 6428204 6428269 -65725613 - MIR SINE MIR -28 234 171 2351 84 0 0 chr20 6428269 6428603 -65725279 - AluSx SINE Alu 0 334 1 395 275 42 35 chr20 6428603 6428678 -65725204 - MIR SINE MIR -91 171 92 267 343 95 0 chr20 6428686 6428791 -65725091 + MIR SINE MIR 78 192 -70 368 284 106 21 chr20 6428940 6429081 -65724801 - MER63 DNA MER1_type -275 787 9 2044 115 43 0 chr20 6429440 6429719 -65724163 - AluSx SINE Alu -21 291 1 1256 164 0 36 chr20 6429850 6430069 -65723813 + AluJb SINE Alu 1 211 -101 962 132 102 0 chr20 6430069 6430236 -65723646 - LTR8 LTR ERV1 0 691 508 749 179 0 0 chr20 6430237 6430354 -65723528 + AluSq/x SINE Alu 3 119 -193 514 132 26 0 chr20 6430362 6430438 -65723444 + AluY SINE Alu 94 171 -140 1328 206 45 94 chr20 6430477 6430779 -65723103 - MLT1C LTR MaLR -61 406 130 1895 114 0 117 chr20 6430779 6430984 -65722898 - AluSx SINE Alu 0 302 151 2216 96 4 0 chr20 6430984 6431264 -65722618 - AluSp SINE Alu -32 281 1 1895 114 0 117 chr20 6431264 6431400 -65722482 - AluSx SINE Alu -151 151 1 1328 206 45 94 chr20 6431400 6431524 -65722358 - MLT1C LTR MaLR -337 130 1 1308 194 116 8 chr20 6431749 6432017 -65721865 - AluSg SINE Alu 0 310 14 2308 105 0 3 chr20 6432188 6432484 -65721398 + AluSg1 SINE Alu 1 295 -14 1241 171 146 50 chr20 6432526 6432807 -65721075 - AluSg SINE Alu 0 310 3 2238 120 0 0 chr20 6432856 6433157 -65720725 + AluSp SINE Alu 1 301 -12 2609 179 60 21 chr20 6433499 6434034 -65719848 - MER21A LTR ERV1 0 931 376 2422 104 15 29 chr20 6434051 6434486 -65719396 + MER41A LTR ERV1 1 470 -165 989 165 11 11 chr20 6434487 6434663 -65719219 + AluSg/x SINE Alu 137 312 0 2280 94 7 0 chr20 6434679 6434966 -65718916 + AluSp SINE Alu 1 289 -24 791 136 157 0 chr20 6434978 6435125 -65718757 + MER41B LTR ERV1 466 635 0 1010 161 11 0 chr20 6435217 6435391 -65718491 + AluY SINE Alu 136 311 0 1512 176 4 33 chr20 6435448 6435721 -65718161 + AluJb SINE Alu 36 300 -12 2217 100 91 0 chr20 6435735 6436096 -65717786 - MER39B LTR ERV1 0 653 260 303 93 0 0 chr20 6436100 6436143 -65717739 + (T)n Simple_repeat Simple_repeat 1 43 0 2379 100 0 0 chr20 6436184 6436484 -65717398 - AluSc SINE Alu -9 300 1 1523 179 4 0 chr20 6436511 6436740 -65717142 - AluSx SINE Alu -82 230 1 829 148 25 0 chr20 6436752 6436874 -65717008 - FLAM_C SINE Alu -18 125 1 217 376 80 0 chr20 6436919 6437044 -65716838 + L2 LINE L2 1086 1220 -2094 501 207 98 18 chr20 6437086 6437250 -65716632 - MLT1F1 LTR MaLR 0 567 391 300 53 0 0 chr20 6437283 6437321 -65716561 + (TCC)n Simple_repeat Simple_repeat 3 40 0 1611 154 23 53 chr20 6437334 6437633 -65716249 - AluJo SINE Alu -22 290 1 11084 51 9 12 chr20 6437645 6439025 -65714857 - SVA Other Other -9 1377 2 269 259 37 49 chr20 6439147 6439228 -65714654 - MLT1F1 LTR MaLR -304 286 207 2149 129 0 3 chr20 6439378 6439673 -65714209 - AluSx SINE Alu -18 294 1 2186 117 7 0 chr20 6439673 6439971 -65713911 - AluSx SINE Alu -12 300 1 2063 220 89 4 chr20 6440182 6440645 -65713237 - MLT1F LTR MaLR 0 542 41 926 153 0 7 chr20 6440700 6440837 -65713045 + AluJb SINE Alu 1 136 -176 2070 126 34 0 chr20 6440855 6441148 -65712734 + AluSx SINE Alu 1 303 -9 628 260 104 24 chr20 6441817 6442067 -65711815 + L2 LINE L2 1851 2120 -1194 669 210 0 8 chr20 6442077 6442196 -65711686 + AluSq/x SINE Alu 2 119 -193 2123 141 3 0 chr20 6442196 6442501 -65711381 - AluSx SINE Alu -6 306 1 1688 137 133 0 chr20 6442569 6442840 -65711042 - AluSx SINE Alu -5 307 1 888 284 177 28 chr20 6442902 6443459 -65710423 + L2 LINE L2 2144 2860 -453 2263 117 3 0 chr20 6443459 6443766 -65710116 + AluSx SINE Alu 1 308 -4 888 284 177 28 chr20 6443766 6444014 -65709868 + L2 LINE L2 2860 3070 -243 1102 185 17 0 chr20 6444239 6444417 -65709465 + AluJb SINE Alu 109 289 -23 1321 128 0 15 chr20 6445079 6445306 -65708576 - AluSg/x SINE Alu 0 308 85 618 110 12 0 chr20 6445306 6445388 -65708494 - AluSp/q SINE Alu -63 250 168 993 69 0 42 chr20 6445388 6445532 -65708350 + AluSp/q SINE Alu 176 313 0 1683 178 31 0 chr20 6445635 6445922 -65707960 + AluJb SINE Alu 1 296 -16 2121 122 3 0 chr20 6445943 6446237 -65707645 + AluY SINE Alu 1 295 -16 2389 78 3 16 chr20 6446687 6446996 -65706886 + AluSq SINE Alu 1 305 -8 241 293 0 0 chr20 6447243 6447318 -65706564 - MIR3 SINE MIR -9 199 125 1996 162 0 0 chr20 6447322 6447624 -65706258 + AluSx SINE Alu 1 302 -10 2221 122 0 0 chr20 6447635 6447967 -65705915 - AluSg SINE Alu 0 332 1 1470 157 0 8 chr20 6447992 6448228 -65705654 - AluJb SINE Alu -9 303 70 2388 102 0 0 chr20 6448322 6448626 -65705256 - AluSq SINE Alu -9 304 1 2182 85 3 21 chr20 6448662 6448967 -65704915 + AluSg SINE Alu 5 304 0 191 172 35 0 chr20 6448997 6449012 -65704870 + GA-rich Low_complexity Low_complexity 1 14 -46 1688 164 64 20 chr20 6449012 6449310 -65704572 + AluJb SINE Alu 1 311 -1 191 172 35 0 chr20 6449310 6449352 -65704530 + GA-rich Low_complexity Low_complexity 14 60 0 1874 118 70 0 chr20 6449740 6450010 -65703872 - AluSg SINE Alu -13 297 9 2278 102 0 0 chr20 6450023 6450340 -65703542 - AluSx SINE Alu 0 317 1 214 222 0 19 chr20 6450407 6450461 -65703421 - MIR SINE MIR -56 152 100 3764 93 15 99 chr20 6450596 6451281 -65702601 + MER4A LTR ERV1 1 627 -37 2183 138 0 0 chr20 6451281 6451579 -65702303 - AluSx SINE Alu -14 298 1 2243 130 3 0 chr20 6451924 6452232 -65701650 + AluSx SINE Alu 1 309 -3 2218 109 0 7 chr20 6452601 6452894 -65700988 - AluSx SINE Alu -19 293 3 2411 64 3 10 chr20 6453089 6453387 -65700495 - AluY SINE Alu -15 296 1 243 0 0 0 chr20 6453569 6453596 -65700286 + (TG)n Simple_repeat Simple_repeat 2 28 0 285 212 0 159 chr20 6453779 6453930 -65699952 + MIR SINE MIR 136 262 0 2308 102 3 0 chr20 6453969 6454262 -65699620 - AluSc SINE Alu -15 294 1 1524 177 7 21 chr20 6454292 6454574 -65699308 + AluJo SINE Alu 35 312 0 1904 114 25 89 chr20 6454762 6455077 -65698805 + AluJb SINE Alu 1 295 -17 335 241 190 26 chr20 6455082 6455198 -65698684 - MIR SINE MIR -10 252 118 236 235 111 12 chr20 6455200 6455281 -65698601 - MLT1K LTR MaLR -48 540 452 2501 44 7 3 chr20 6455457 6455754 -65698128 - AluY SINE Alu -9 302 5 809 275 95 64 chr20 6455954 6456376 -65697506 - LTR16A LTR ERVL 0 450 16 1883 160 0 0 chr20 6457031 6457163 -65696719 + AluJo SINE Alu 1 132 -180 1798 129 39 25 chr20 6457163 6457443 -65696439 + AluSx SINE Alu 15 298 -14 1883 160 0 0 chr20 6457443 6457597 -65696285 + AluJo SINE Alu 131 287 -25 631 248 0 35 chr20 6457662 6457803 -65696079 + AluJo SINE Alu 2 137 -175 521 148 0 87 chr20 6457799 6457914 -65695968 + FLAM_C SINE Alu 39 143 0 * 262 105 0 0 chr20 6458863 6458901 -65694981 - Alu SINE Alu -42 258 221 263 184 0 0 chr20 6458931 6458980 -65694902 + L1MC5 LINE L1 7843 7891 -70 2392 97 3 0 chr20 6459012 6459322 -65694560 + AluSx SINE Alu 1 311 -1 191 281 51 148 chr20 6459364 6459560 -65694322 - L2 LINE L2 -230 3042 2866 2045 127 20 0 chr20 6459750 6460042 -65693840 + AluSx SINE Alu 1 298 -14 2738 130 30 39 chr20 6460050 6460512 -65693370 + L1PB4 LINE L1 5581 6038 -118 1922 150 0 14 chr20 6460514 6460800 -65693082 + AluJo SINE Alu 1 282 -30 533 71 0 0 chr20 6460800 6460870 -65693012 - Alu SINE Alu -9 300 231 184 182 0 0 chr20 6461606 6461639 -65692243 + MIR SINE MIR 113 145 -63 936 294 87 32 chr20 6461971 6462440 -65691442 + L1ME LINE L1 5319 5813 -349 246 240 0 0 chr20 6462570 6462620 -65691262 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 1480 116 98 0 chr20 6462639 6462854 -65691028 + AluSx SINE Alu 1 236 -76 229 111 0 0 chr20 6462887 6462923 -65690959 - HSMAR1 DNA Mariner -1250 37 2 2946 6 0 0 chr20 6464059 6464371 -65689511 + AluYb8 SINE Alu 1 312 -6 769 132 18 0 chr20 6464379 6464532 -65689350 + FLAM_C SINE Alu 1 155 0 252 83 0 0 chr20 6464539 6464575 -65689307 + MER94 DNA DNA 79 114 -20 2389 90 0 10 chr20 6464877 6465189 -65688693 - AluSg SINE Alu 0 310 2 1701 185 0 29 chr20 6465586 6465899 -65687983 + AluJo SINE Alu 3 306 -6 631 136 25 111 chr20 6465911 6466110 -65687772 - MER33 DNA MER1_type -3 321 140 579 76 0 13 chr20 6466115 6466194 -65687688 + MSTA LTR MaLR 1 78 -348 200 109 43 22 chr20 6466206 6466252 -65687630 + (TTTAA)n Simple_repeat Simple_repeat 4 50 0 1906 133 17 7 chr20 6466316 6466609 -65687273 + MSTA LTR MaLR 133 428 0 589 175 56 32 chr20 6466615 6466741 -65687141 - MER33 DNA MER1_type -195 129 1 361 18 0 54 chr20 6466769 6466825 -65687057 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 2122 114 31 0 chr20 6466841 6467130 -65686752 - AluSx SINE Alu -14 298 1 381 202 24 12 chr20 6467476 6467560 -65686322 - L2 LINE L2 -15 3298 3214 1856 91 0 0 chr20 6467598 6467855 -65686027 + AluSx SINE Alu 55 311 0 1838 145 3 42 chr20 6468223 6468390 -65685492 - AluJb SINE Alu -14 298 147 2196 122 0 0 chr20 6468390 6468685 -65685197 - AluSq SINE Alu -18 295 1 1838 145 3 42 chr20 6468685 6468827 -65685055 - AluJb SINE Alu -165 147 1 318 254 0 0 chr20 6468848 6468911 -65684971 - ERVL LTR ERVL -826 4938 4876 2347 141 33 85 chr20 6469030 6469252 -65684630 - L1MB2 LINE L1 -2 6169 5937 1788 148 3 39 chr20 6469252 6469557 -65684325 - AluJo SINE Alu -18 294 1 2347 141 33 85 chr20 6469557 6469743 -65684139 - L1MB2 LINE L1 -234 5937 5786 1926 156 0 0 chr20 6469743 6470051 -65683831 - AluSx SINE Alu 0 308 1 2347 141 33 85 chr20 6470051 6470124 -65683758 - L1MB2 LINE L1 -385 5786 5711 899 243 99 56 chr20 6470176 6470550 -65683332 + MLT1I LTR MaLR 16 405 -4 326 227 205 22 chr20 6470550 6470735 -65683147 - L2 LINE L2 -264 3049 2831 30 27 0 0 chr20 6471116 6471153 -65682729 + AT_rich Low_complexity Low_complexity 1 37 0 1911 95 76 0 chr20 6471331 6471641 -65682241 - AluSx SINE Alu 0 330 1 1760 140 17 24 chr20 6471906 6472199 -65681683 + AluJb SINE Alu 1 291 -21 2332 91 0 0 chr20 6472199 6472496 -65681386 + AluY SINE Alu 3 299 -12 22 0 0 0 chr20 6472885 6472907 -65680975 + AT_rich Low_complexity Low_complexity 1 22 0 1958 164 0 3 chr20 6472931 6473218 -65680664 + AluSx SINE Alu 1 286 -26 466 221 160 8 chr20 6473675 6473806 -65680076 - MER20 DNA MER1_type -17 202 52 1066 232 59 11 chr20 6474811 6475083 -65678799 - L1MC4 LINE L1 -213 7829 7545 315 0 0 0 chr20 6475256 6475291 -65678591 + (A)n Simple_repeat Simple_repeat 1 35 0 430 297 31 0 chr20 6476005 6476133 -65677749 - MIR3 SINE MIR -41 167 36 972 229 52 68 chr20 6476274 6476584 -65677298 - MLT1B LTR MaLR -85 305 1 228 175 79 16 chr20 6476584 6476647 -65677235 - Charlie4 DNA MER1_type -1708 253 187 2192 98 190 6 chr20 6476647 6476994 -65676888 + LTR57 LTR ERVL 1 411 0 978 143 11 48 chr20 6477001 6477190 -65676692 - Charlie4 DNA MER1_type -1779 182 1 821 252 73 57 chr20 6477898 6478334 -65675548 + LTR16A1 LTR ERVL 13 455 -2 25 0 0 0 chr20 6480482 6480507 -65673375 + AT_rich Low_complexity Low_complexity 1 25 0 766 171 0 0 chr20 6480514 6480631 -65673251 - FLAM_C SINE Alu -25 118 2 489 184 54 41 chr20 6480654 6480801 -65673081 - L1ME3A LINE L1 -1 6169 6021 24 0 0 0 chr20 6481029 6481053 -65672829 + AT_rich Low_complexity Low_complexity 1 24 0 2641 104 6 8 chr20 6481126 6481491 -65672391 - THE1B LTR MaLR 0 364 1 220 250 135 48 chr20 6481527 6481631 -65672251 + L2 LINE L2 2593 2705 -609 230 274 49 10 chr20 6481897 6481999 -65671883 + L1P LINE L1 4954 5059 -1087 346 292 28 96 chr20 6482200 6482535 -65671347 + L1ME LINE L1 5295 5605 -516 2351 94 0 3 chr20 6482535 6482834 -65671048 - AluSx SINE Alu -14 298 1 346 292 28 96 chr20 6482834 6482861 -65671021 + L1ME LINE L1 5605 5632 -489 259 228 49 41 chr20 6482872 6482995 -65670887 + MER113 DNA MER1_type? 8 131 -390 314 294 92 35 chr20 6483171 6483534 -65670348 - L2 LINE L2 -203 3110 2719 336 220 97 40 chr20 6483597 6483793 -65670089 + L1M4 LINE L1 4926 5137 -1009 2057 113 0 55 chr20 6483794 6484104 -65669778 - AluSq SINE Alu -17 296 4 748 161 8 8 chr20 6484141 6484265 -65669617 - AluJb SINE Alu -187 125 2 487 259 140 9 chr20 6484303 6484531 -65669351 + L1MC4 LINE L1 7781 8038 -4 1478 144 10 100 chr20 6484531 6484830 -65669052 - AluJo SINE Alu -22 290 19 600 299 48 10 chr20 6485842 6486049 -65667833 + L1MDa LINE L1 15 229 -6311 246 156 89 0 chr20 6486081 6486171 -65667711 + GA-rich Low_complexity Low_complexity 5 102 0 2067 169 46 3 chr20 6486391 6486741 -65667141 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 6488162 6488364 -65665518 + L2 LINE L2 2842 3069 -244 742 261 58 4 chr20 6488403 6488644 -65665238 + HAL1 LINE L1 714 967 -1540 275 225 12 25 chr20 6488737 6488817 -65665065 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 6488903 6488989 -65664893 - Tigger2 DNA MER2_type 0 2718 2654 2822 67 3 16 chr20 6488989 6489363 -65664519 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 6489363 6489447 -65664435 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 6489446 6489654 -65664228 - Tigger2 DNA MER2_type -2508 210 1 850 249 75 61 chr20 6489658 6490148 -65663734 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 6490176 6490503 -65663379 + AluSx SINE Alu 1 308 -4 499 156 9 9 chr20 6491129 6491238 -65662644 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 515 170 18 45 chr20 6491851 6491963 -65661919 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 6492358 6492517 -65661365 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 6492524 6492593 -65661289 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 6492692 6492720 -65661162 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 6492778 6492840 -65661042 + MER5B DNA MER1_type 17 76 -102 279 0 0 0 chr20 6492861 6492892 -65660990 + (TG)n Simple_repeat Simple_repeat 1 31 0 596 187 0 41 chr20 6492917 6493040 -65660842 - L1ME3 LINE L1 0 6162 6045 263 222 32 0 chr20 6494125 6494188 -65659694 - HAL1 LINE L1 -923 1584 1520 1609 254 71 117 chr20 6494190 6495472 -65658410 - L1MEd LINE L1 -4878 1241 19 180 0 0 0 chr20 6496462 6496482 -65657400 + (TA)n Simple_repeat Simple_repeat 2 21 0 2327 97 0 10 chr20 6496482 6496782 -65657100 - AluSx SINE Alu -11 301 5 783 244 91 0 chr20 6496922 6497131 -65656751 - MIR SINE MIR -13 249 22 1002 297 46 23 chr20 6497240 6497674 -65656208 + MARNA DNA Mariner 129 572 -14 2248 109 7 0 chr20 6498464 6498767 -65655115 + AluSq SINE Alu 1 305 -8 335 229 60 0 chr20 6498817 6498900 -65654982 + MLT1I LTR MaLR 314 401 -8 2104 103 27 3 chr20 6499131 6499423 -65654459 - AluSx SINE Alu -13 299 1 23 33 0 0 chr20 6499424 6499454 -65654428 + AT_rich Low_complexity Low_complexity 1 30 0 3183 231 57 12 chr20 6499717 6500833 -65653049 - L1MDb LINE L1 -4606 1800 658 240 297 31 0 chr20 6501231 6501295 -65652587 + C-rich Low_complexity Low_complexity 1 66 0 407 148 0 0 chr20 6501550 6501611 -65652271 - AluJ/FLAM SINE Alu -250 62 2 853 220 202 46 chr20 6501623 6502014 -65651868 + MLT1H LTR MaLR 98 549 0 1990 137 7 10 chr20 6502162 6502483 -65651399 - AluSx SINE Alu 0 312 1 639 185 122 44 chr20 6503161 6503424 -65650458 - MLT1J2 LTR MaLR -72 374 60 1847 157 7 13 chr20 6503711 6504016 -65649866 - AluJb SINE Alu -9 303 1 484 237 75 94 chr20 6504135 6504216 -65649666 + MIR SINE MIR 1 82 -180 1887 145 0 20 chr20 6504216 6504513 -65649369 - AluJo SINE Alu -21 291 1 484 237 75 94 chr20 6504513 6504697 -65649185 + MIR SINE MIR 82 261 -1 2267 101 3 0 chr20 6504702 6505000 -65648882 - AluSg SINE Alu -11 299 1 227 350 29 0 chr20 6505113 6505250 -65648632 + MIR SINE MIR 63 203 -59 1586 214 74 40 chr20 6507609 6508057 -65645825 - MLT1C LTR MaLR -2 465 3 232 269 15 30 chr20 6508215 6508282 -65645600 + MIR3 SINE MIR 119 184 -24 390 21 0 0 chr20 6508335 6508382 -65645500 + (CA)n Simple_repeat Simple_repeat 2 48 0 413 205 26 13 chr20 6508392 6508470 -65645412 + FRAM/FAM SINE Alu 6 84 -101 21 71 0 0 chr20 6510245 6510287 -65643595 + AT_rich Low_complexity Low_complexity 1 42 0 1286 194 0 104 chr20 6511390 6511535 -65642347 + AluY SINE Alu 1 93 -218 2243 108 0 0 chr20 6511535 6511830 -65642052 + AluSx SINE Alu 1 295 -17 1286 194 0 104 chr20 6511830 6512019 -65641863 + AluY SINE Alu 93 300 -11 26 0 0 0 chr20 6512384 6512410 -65641472 + AT_rich Low_complexity Low_complexity 1 26 0 221 320 100 20 chr20 6513555 6513655 -65640227 - MIR3 SINE MIR -99 109 2 1340 190 132 4 chr20 6513694 6513952 -65639930 + AluJb SINE Alu 1 291 -21 2206 83 0 21 chr20 6514204 6514569 -65639313 + AluSq SINE Alu 1 359 0 194 0 39 0 chr20 6514693 6514719 -65639163 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 777 182 0 0 chr20 6515142 6515274 -65638608 + FLAM_C SINE Alu 2 133 0 1922 141 17 3 chr20 6516908 6517198 -65636684 - AluJb SINE Alu -17 295 2 27 29 0 0 chr20 6517467 6517501 -65636381 + AT_rich Low_complexity Low_complexity 1 34 0 2190 102 20 0 chr20 6517987 6518281 -65635601 + AluSp SINE Alu 7 306 -7 188 218 148 50 chr20 6518362 6518463 -65635419 + MIR SINE MIR 28 138 -124 710 220 0 0 chr20 6518867 6518999 -65634883 + MER58B DNA MER1_type 161 292 -49 244 138 31 0 chr20 6519179 6519244 -65634638 + A-rich Low_complexity Low_complexity 4 70 0 243 220 180 20 chr20 6519555 6519655 -65634227 + HAL1 LINE L1 22 137 -2370 1147 179 31 69 chr20 6519820 6519925 -65633957 + MER58B DNA MER1_type 61 168 -2252 1955 134 0 24 chr20 6519925 6520256 -65633626 + AluSx SINE Alu 1 324 0 2369 84 0 3 chr20 6520258 6520557 -65633325 + AluSx SINE Alu 4 301 -11 1147 179 31 69 chr20 6520557 6520737 -65633145 + MER58B DNA MER1_type 169 339 -2 528 282 97 31 chr20 6520935 6521126 -65632756 + HAL1 LINE L1 771 948 -1559 13416 124 51 30 chr20 6521126 6521297 -65632585 - Tigger1 DNA MER2_type 0 2418 2252 294 50 0 0 chr20 6521297 6521337 -65632545 + (CA)n Simple_repeat Simple_repeat 2 41 0 13416 124 51 30 chr20 6521337 6523384 -65630498 - Tigger1 DNA MER2_type -166 2252 143 1929 163 0 10 chr20 6523384 6523685 -65630197 + AluJb SINE Alu 1 298 -14 13416 124 51 30 chr20 6523685 6523828 -65630054 - Tigger1 DNA MER2_type -2275 143 5 528 282 97 31 chr20 6523828 6524058 -65629824 + HAL1 LINE L1 948 1220 -1287 739 282 85 36 chr20 6524229 6525002 -65628880 + L1MEd LINE L1 565 1403 -4726 1947 159 3 0 chr20 6525002 6525304 -65628578 + AluJb SINE Alu 1 303 -9 739 282 85 36 chr20 6525304 6525602 -65628280 + L1MEd LINE L1 1403 1685 -4444 24 77 0 0 chr20 6525990 6526042 -65627840 + AT_rich Low_complexity Low_complexity 1 52 0 599 271 111 52 chr20 6526072 6526273 -65627609 + L1MEd LINE L1 2263 2451 -3678 2228 111 0 9 chr20 6526273 6526588 -65627294 + AluSx SINE Alu 1 312 0 599 271 111 52 chr20 6526588 6526708 -65627174 + L1MEd LINE L1 2451 2562 -3567 2432 46 0 33 chr20 6526708 6527012 -65626870 + AluY SINE Alu 1 294 -17 599 271 111 52 chr20 6527012 6527437 -65626445 + L1MEd LINE L1 2562 3054 -3075 391 156 231 0 chr20 6527452 6527638 -65626244 + Charlie5 DNA MER1_type 2391 2619 0 1722 103 0 74 chr20 6527658 6527929 -65625953 + AluSx SINE Alu 1 251 -61 421 237 87 8 chr20 6527946 6528199 -65625683 + L1MEd LINE L1 3056 3328 -2801 344 135 0 0 chr20 6528199 6528251 -65625631 + MER66A LTR ERV1 287 338 -140 1153 219 99 128 chr20 6528416 6528888 -65624994 + L1MEd LINE L1 3433 3917 -2212 545 165 220 0 chr20 6528888 6528997 -65624885 + FLAM_C SINE Alu 1 133 -10 1153 219 99 128 chr20 6528997 6529402 -65624480 + L1MEd LINE L1 3917 4332 -1797 2070 142 7 3 chr20 6529402 6529704 -65624178 - AluSx SINE Alu -9 303 1 1153 219 99 128 chr20 6529704 6530138 -65623744 + L1MEd LINE L1 4332 4812 -1317 288 329 13 0 chr20 6530276 6530428 -65623454 + HAL1 LINE L1 1433 1586 -921 1273 179 22 0 chr20 6530437 6530660 -65623222 + AluJb SINE Alu 85 312 0 440 289 95 19 chr20 6530686 6530897 -65622985 + HAL1 LINE L1 1602 1828 -679 622 155 0 0 chr20 6531060 6531157 -65622725 + AluJ/FLAM SINE Alu 1 97 -215 189 0 0 0 chr20 6531164 6531185 -65622697 + (CA)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr20 6532292 6532313 -65621569 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 6532818 6532858 -65621024 + AT_rich Low_complexity Low_complexity 1 40 0 751 213 86 25 chr20 6533343 6533540 -65620342 + MIR SINE MIR 52 260 -2 1396 277 177 57 chr20 6533667 6534292 -65619590 + L2 LINE L2 960 1509 -1805 734 160 48 0 chr20 6534292 6534417 -65619465 + FLAM_A SINE Alu 2 132 -1 1396 277 177 57 chr20 6534417 6535307 -65618575 + L2 LINE L2 1509 2656 -658 219 318 24 47 chr20 6535307 6535392 -65618490 + L2 LINE L2 2608 2690 -624 2126 117 13 0 chr20 6535755 6536063 -65617819 + AluSx SINE Alu 1 312 0 1636 143 0 8 chr20 6536601 6536839 -65617043 - AluJo SINE Alu -10 302 67 752 129 0 95 chr20 6538073 6538220 -65615662 + FLAM_C SINE Alu 1 133 0 2496 82 0 0 chr20 6538291 6538597 -65615285 - AluSg SINE Alu -4 306 1 317 235 193 84 chr20 6541000 6541359 -65612523 + L1M2 LINE L1 553 1349 -5500 23 33 0 0 chr20 6542095 6542125 -65611757 + AT_rich Low_complexity Low_complexity 1 30 0 450 231 48 0 chr20 6542172 6542276 -65611606 - MIR SINE MIR -62 200 92 28 29 0 0 chr20 6542648 6542683 -65611199 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr20 6543833 6543868 -65610014 + AT_rich Low_complexity Low_complexity 1 35 0 1978 131 0 11 chr20 6544254 6544569 -65609313 - AluSx SINE Alu 0 314 3 640 156 0 0 chr20 6544906 6545002 -65608880 + AluJ/FLAM SINE Alu 1 96 -216 1011 160 0 32 chr20 6545065 6545252 -65608630 + AluJb SINE Alu 110 290 -22 2015 143 13 10 chr20 6545593 6545907 -65607975 - 7SLRNA srpRNA srpRNA -5 315 1 2060 157 15 0 chr20 6546239 6546571 -65607311 + MER1B DNA MER1_type 1 337 0 1563 173 6 58 chr20 6546949 6547261 -65606621 - AluJo SINE Alu -16 296 1 2287 107 10 0 chr20 6547348 6547646 -65606236 + AluSx SINE Alu 1 301 -11 989 206 56 36 chr20 6547681 6547987 -65605895 - MLT1D LTR MaLR -191 314 3 313 96 11 85 chr20 6548189 6548366 -65605516 + (TA)n Simple_repeat Simple_repeat 1 164 0 210 167 0 62 chr20 6548406 6548502 -65605380 + (TA)n Simple_repeat Simple_repeat 1 90 0 244 253 26 49 chr20 6549245 6549359 -65604523 - LTR67 LTR ERVL -357 200 38 1328 150 146 16 chr20 6549761 6550014 -65603868 + AluJo SINE Alu 1 286 -26 694 211 0 8 chr20 6550026 6550154 -65603728 + FLAM_A SINE Alu 1 127 -6 2204 100 19 7 chr20 6550159 6550468 -65603414 + AluSp SINE Alu 1 313 0 362 274 62 0 chr20 6550583 6550696 -65603186 - MER74A LTR ERVL -84 474 355 25 0 0 0 chr20 6550930 6550955 -65602927 + AT_rich Low_complexity Low_complexity 1 25 0 1094 141 0 0 chr20 6551120 6551276 -65602606 - AluSg/x SINE Alu -26 284 129 1717 183 24 7 chr20 6551346 6551641 -65602241 - AluJo SINE Alu -12 300 1 253 302 185 0 chr20 6551674 6551896 -65601986 - HAL1b LINE L1 -572 776 514 284 333 100 39 chr20 6551896 6552386 -65601496 + LTR67 LTR ERVL 23 542 -15 465 145 35 76 chr20 6552420 6552565 -65601317 + MER58 DNA MER1_type 86 224 -2196 1496 185 10 49 chr20 6552712 6553020 -65600862 - AluJo SINE Alu -14 298 3 438 65 0 0 chr20 6553116 6553178 -65600704 + (TG)n Simple_repeat Simple_repeat 1 62 0 220 319 106 38 chr20 6553623 6553783 -65600099 - MIR SINE MIR -27 235 65 283 329 13 0 chr20 6554857 6554933 -65598949 - L2 LINE L2 -36 3236 3160 586 266 23 23 chr20 6555196 6555289 -65598593 - MIR SINE MIR -54 208 113 479 111 0 25 chr20 6555289 6555370 -65598512 + MADE1 DNA Mariner 1 79 -1 586 266 23 23 chr20 6555370 6555453 -65598429 - MIR SINE MIR -148 114 32 425 261 0 0 chr20 6555838 6555926 -65597956 - L2 LINE L2 -17 3255 3168 2222 111 0 13 chr20 6557264 6557571 -65596311 + AluSx SINE Alu 2 304 -8 2085 119 10 0 chr20 6558224 6558519 -65595363 + AluSx SINE Alu 1 298 -14 183 279 313 25 chr20 6558533 6558734 -65595148 - MIR SINE MIR -1 261 3 315 189 74 82 chr20 6558949 6559071 -65594811 + L1MC4a LINE L1 5839 5959 -1849 2302 102 0 3 chr20 6559166 6559461 -65594421 - AluSx SINE Alu -18 294 1 752 252 102 29 chr20 6559670 6559983 -65593899 + L1MC4a LINE L1 5574 5909 -1899 1827 148 10 10 chr20 6560513 6560816 -65593066 + AluJb SINE Alu 1 303 -9 2078 129 0 3 chr20 6561794 6562089 -65591793 + AluSx SINE Alu 1 294 -18 2386 78 7 3 chr20 6562181 6562476 -65591406 - AluSc SINE Alu -13 296 1 230 322 25 8 chr20 6563556 6563677 -65590205 - L1ME4a LINE L1 -164 5957 5835 299 309 43 12 chr20 6563696 6563858 -65590024 - L1ME4a LINE L1 -352 5769 5603 2227 116 3 0 chr20 6563920 6564221 -65589661 - AluSx SINE Alu -10 302 1 238 223 117 21 chr20 6565582 6565676 -65588206 - HAL1b LINE L1 -1169 179 77 410 283 9 9 chr20 6566603 6566716 -65587166 - MER58 DNA MER1_type -2306 114 2 1877 148 0 0 chr20 6566747 6567025 -65586857 - AluSx SINE Alu -9 303 26 3011 246 103 36 chr20 6567229 6568505 -65585377 - L2 LINE L2 0 3313 1953 1993 121 24 24 chr20 6568776 6569073 -65584809 + AluSx SINE Alu 1 297 -15 280 215 183 11 chr20 6569189 6569282 -65584600 - L2 LINE L2 -7 3306 3198 431 248 115 73 chr20 6569809 6570043 -65583839 - MIR SINE MIR 0 262 19 501 284 204 10 chr20 6570216 6570417 -65583465 + MIR SINE MIR 6 245 -17 255 219 141 0 chr20 6570419 6570483 -65583399 + MER91B DNA MER1_type 2 74 -116 1641 184 13 20 chr20 6570662 6570786 -65583096 - AluJo SINE Alu -4 308 185 2261 189 111 34 chr20 6570786 6571310 -65582572 + LTR6A LTR ERV1 1 564 0 1641 184 13 20 chr20 6571310 6571490 -65582392 - AluJo SINE Alu -127 185 6 587 134 214 36 chr20 6571493 6571605 -65582277 - FLAM_C SINE Alu -10 133 2 2545 65 0 0 chr20 6571844 6572153 -65581729 + AluY SINE Alu 1 309 -2 1849 176 0 0 chr20 6572360 6572661 -65581221 - AluJo SINE Alu -9 303 3 428 313 50 19 chr20 6572928 6573088 -65580794 - MER5B DNA MER1_type -1 177 13 1699 181 21 3 chr20 6573212 6573500 -65580382 + AluJb SINE Alu 1 293 -19 2069 136 0 0 chr20 6573689 6573976 -65579906 + AluSx SINE Alu 5 291 -21 1219 148 0 0 chr20 6574910 6575092 -65578790 + AluSg/x SINE Alu 126 307 -5 1728 153 3 23 chr20 6575146 6575446 -65578436 + AluJb SINE Alu 14 307 -5 1959 169 87 28 chr20 6576145 6576535 -65577347 - MER4B LTR ERV1 -197 413 1 1539 186 0 36 chr20 6576535 6576842 -65577040 + AluJo SINE Alu 14 309 -3 398 273 91 6 chr20 6576967 6577132 -65576750 + LTR16C LTR ERVL 17 195 -296 335 193 159 11 chr20 6577264 6577352 -65576530 + LTR16C LTR ERVL 391 491 0 839 214 66 11 chr20 6577376 6577558 -65576324 - MER58A DNA MER1_type -3 221 30 2260 113 0 0 chr20 6578029 6578330 -65575552 - AluSx SINE Alu -11 301 1 548 258 71 11 chr20 6578498 6578680 -65575202 - MIR SINE MIR -58 204 12 309 244 58 12 chr20 6578860 6578905 -65574977 + MLT1L LTR MaLR 515 556 -59 1417 183 71 77 chr20 6578905 6579081 -65574801 - MER58B DNA MER1_type -2080 340 165 2382 73 3 0 chr20 6579081 6579367 -65574515 - AluSq SINE Alu -16 297 11 1417 183 71 77 chr20 6579367 6579528 -65574354 - MER58B DNA MER1_type -2255 165 5 309 244 58 12 chr20 6579528 6579568 -65574314 + MLT1L LTR MaLR 556 604 -11 467 277 161 43 chr20 6581110 6581673 -65572209 + HAL1 LINE L1 992 1719 -788 225 296 14 0 chr20 6581679 6581750 -65572132 + HAL1 LINE L1 1813 1884 -623 814 126 0 0 chr20 6582991 6583102 -65570780 - HY1 scRNA scRNA -1 111 1 189 310 149 23 chr20 6583136 6583223 -65570659 + MIR SINE MIR 48 145 -117 2303 80 3 29 chr20 6583804 6584117 -65569765 + AluY SINE Alu 1 305 -6 855 223 178 98 chr20 6584876 6584966 -65568916 + MLT1F1 LTR MaLR 1 82 -513 2973 6 0 0 chr20 6584966 6585284 -65568598 + AluYb8 SINE Alu 1 318 0 855 223 178 98 chr20 6585284 6585744 -65568138 + MLT1F1 LTR MaLR 82 595 0 601 151 0 11 chr20 6585908 6586001 -65567881 + AluJb SINE Alu 209 300 -12 880 155 0 8 chr20 6586416 6586545 -65567337 - FLAM_A SINE Alu -5 128 1 874 265 76 64 chr20 6586582 6586698 -65567184 + L1ME3 LINE L1 4987 5100 -1062 2173 104 3 0 chr20 6586698 6586986 -65566896 - AluSp SINE Alu -24 289 1 874 265 76 64 chr20 6586986 6587196 -65566686 + L1ME3 LINE L1 5100 5306 -856 1053 185 0 0 chr20 6587196 6587353 -65566529 + FRAM SINE Alu 2 158 -8 874 265 76 64 chr20 6587353 6587669 -65566213 + L1ME3 LINE L1 5306 5657 -505 2262 79 0 0 chr20 6587669 6587949 -65565933 + AluSg SINE Alu 27 306 -4 874 265 76 64 chr20 6587949 6588131 -65565751 + L1ME3 LINE L1 5657 5835 -327 2284 83 7 0 chr20 6589260 6589549 -65564333 - AluSc SINE Alu -18 291 1 1292 139 93 9 chr20 6589897 6590113 -65563769 - MER46A DNA MER2_type 0 236 3 1592 148 112 11 chr20 6590947 6591224 -65562658 + AluSg1 SINE Alu 2 306 -3 2033 117 33 10 chr20 6591573 6591873 -65562009 + AluSc SINE Alu 1 307 -2 772 255 52 14 chr20 6592673 6592885 -65560997 - MIR SINE MIR -29 233 14 2482 64 0 0 chr20 6593867 6594163 -65559719 + AluY SINE Alu 1 296 -15 297 0 0 0 chr20 6594168 6594201 -65559681 + (CA)n Simple_repeat Simple_repeat 1 33 0 330 309 171 6 chr20 6594348 6594523 -65559359 + LTR50 LTR ERVL 16 219 -576 514 245 121 29 chr20 6594625 6594939 -65558943 + LTR33A LTR ERVL 307 507 -16 235 164 0 49 chr20 6596094 6596155 -65557727 + L1MC2 LINE L1 6276 6333 -11 194 312 104 16 chr20 6596331 6596456 -65557426 - MIR3 SINE MIR -69 139 4 2046 96 17 43 chr20 6598268 6598569 -65555313 - AluSx SINE Alu -19 293 1 796 143 0 9 chr20 6598956 6599068 -65554814 - AluJb SINE Alu -187 125 15 182 36 0 36 chr20 6599489 6599517 -65554365 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 700 200 0 0 chr20 6599519 6599634 -65554248 - AluSg/x SINE Alu -29 280 166 1279 164 24 0 chr20 6599659 6599866 -65554016 - AluJb SINE Alu -100 212 1 273 209 152 29 chr20 6600074 6600179 -65553703 - LTR33 LTR ERVL -38 483 366 487 293 117 46 chr20 6600385 6600624 -65553258 + MIR SINE MIR 1 256 -6 241 333 32 24 chr20 6601374 6601500 -65552382 + MIR3 SINE MIR 15 141 -67 444 328 66 8 chr20 6601560 6601804 -65552078 + MIR SINE MIR 5 262 0 26 0 0 0 chr20 6601846 6601872 -65552010 + AT_rich Low_complexity Low_complexity 1 26 0 1029 271 192 17 chr20 6601979 6602689 -65551193 - L2 LINE L2 -14 3299 2453 27 73 0 0 chr20 6603527 6603582 -65550300 + AT_rich Low_complexity Low_complexity 1 55 0 1601 146 3 128 chr20 6606680 6607023 -65546859 + AluY SINE Alu 2 301 0 997 243 113 60 chr20 6607326 6607758 -65546124 - LTR16B LTR ERVL 0 464 10 2413 84 3 6 chr20 6608128 6608439 -65545443 - AluSg SINE Alu 0 310 1 791 232 13 13 chr20 6608538 6608693 -65545189 + FRAM SINE Alu 1 155 -11 410 152 0 13 chr20 6608693 6608772 -65545110 + GA-rich Low_complexity Low_complexity 3 80 0 225 250 0 0 chr20 6609838 6609914 -65543968 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2052 110 13 0 chr20 6610405 6610706 -65543176 + AluSq SINE Alu 1 305 -8 583 207 32 48 chr20 6611135 6611323 -65542559 - MER5A DNA MER1_type -2 187 3 186 71 0 0 chr20 6612171 6612199 -65541683 + (T)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr20 6612509 6612534 -65541348 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 2034 117 3 7 chr20 6612543 6612843 -65541039 + AluSx SINE Alu 1 299 -13 1276 163 80 64 chr20 6612907 6613220 -65540662 + MER58B DNA MER1_type 24 341 0 900 236 51 4 chr20 6613355 6613592 -65540290 + L2 LINE L2 1932 2179 -1135 2022 180 42 102 chr20 6613592 6613917 -65539965 - LTR55 LTR ERV -5 543 267 1865 142 0 0 chr20 6613917 6614199 -65539683 - AluJb SINE Alu -5 307 26 2022 180 42 102 chr20 6614199 6614450 -65539432 - LTR55 LTR ERV -281 267 2 2272 243 121 9 chr20 6614451 6615238 -65538644 + L2 LINE L2 2178 3047 -266 2052 115 7 3 chr20 6615336 6615641 -65538241 - AluSq SINE Alu -7 306 1 324 253 53 111 chr20 6615757 6615878 -65538004 + HAL1 LINE L1 2324 2432 -75 1497 215 111 14 chr20 6615878 6616302 -65537580 - MLT1C LTR MaLR 0 467 3 324 253 53 111 chr20 6616302 6616370 -65537512 + HAL1 LINE L1 2432 2502 -5 210 37 0 0 chr20 6616670 6616697 -65537185 + (TG)n Simple_repeat Simple_repeat 1 27 0 1173 263 24 58 chr20 6616973 6617234 -65536648 - LTR16C LTR ERVL -2 489 246 1965 204 12 46 chr20 6617234 6617715 -65536167 + MLT1C LTR MaLR 1 465 -2 1173 263 24 58 chr20 6617715 6617868 -65536014 - LTR16C LTR ERVL -245 246 89 987 170 131 5 chr20 6618105 6618311 -65535571 + MER34C LTR ERV1 1 232 -353 507 196 65 82 chr20 6620531 6620832 -65533050 + LTR48 LTR ERV1 378 781 -6 496 263 99 11 chr20 6620998 6621180 -65532702 - MIR SINE MIR -6 256 54 1913 148 0 3 chr20 6621188 6621485 -65532397 - AluJb SINE Alu -15 297 2 288 0 0 0 chr20 6621485 6621517 -65532365 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 474 18 0 0 chr20 6621516 6621571 -65532311 + (TA)n Simple_repeat Simple_repeat 2 56 0 1478 120 171 12 chr20 6621578 6621836 -65532046 - AluSg SINE Alu 0 300 2 707 191 191 0 chr20 6622791 6622948 -65530934 + MER5A DNA MER1_type 1 187 -2 589 221 104 12 chr20 6623168 6623331 -65530551 + MER5B DNA MER1_type 1 178 0 184 250 28 56 chr20 6623493 6623565 -65530317 + L2 LINE L2 2679 2748 -566 264 269 75 54 chr20 6625587 6625680 -65528202 - MIR3 SINE MIR 0 208 114 1061 116 52 174 chr20 6626304 6626649 -65527233 + MER33 DNA MER1_type 22 324 0 1422 188 104 20 chr20 6626939 6627284 -65526598 + MLT1A2 LTR MaLR 1 374 0 180 349 48 24 chr20 6627653 6627736 -65526146 + L3 LINE CR1 1493 1577 0 722 293 75 14 chr20 6627932 6628212 -65525670 + MER102a DNA MER1_type 2 298 -32 2251 100 0 0 chr20 6628798 6629109 -65524773 - AluY SINE Alu 0 311 1 1396 115 8 47 chr20 6629223 6629457 -65524425 - AluSg/x SINE Alu -4 306 82 2030 102 3 48 chr20 6629468 6629783 -65524099 - AluSq SINE Alu -8 305 5 508 298 60 18 chr20 6630411 6630579 -65523303 - MIR3 SINE MIR -1 207 33 476 214 145 0 chr20 6631491 6631622 -65522260 + L1ME3A LINE L1 6019 6168 -2 1990 102 32 3 chr20 6631627 6631911 -65521971 + AluSg SINE Alu 1 292 -18 29 60 0 0 chr20 6632267 6632317 -65521565 + AT_rich Low_complexity Low_complexity 1 50 0 2239 109 0 6 chr20 6633708 6634021 -65519861 + AluSx SINE Alu 1 311 -1 1066 141 61 5 chr20 6634250 6634448 -65519434 + L1MB7 LINE L1 5976 6184 0 24 32 0 0 chr20 6634471 6634502 -65519380 + AT_rich Low_complexity Low_complexity 1 31 0 228 67 0 0 chr20 6634980 6635010 -65518872 + (CA)n Simple_repeat Simple_repeat 2 31 0 314 149 218 11 chr20 6637500 6637551 -65516331 + L1MC4a LINE L1 7598 7637 -171 645 14 0 0 chr20 6637551 6637625 -65516257 + (TATTG)n Simple_repeat Simple_repeat 2 75 0 314 149 218 11 chr20 6637625 6637660 -65516222 + L1MC4a LINE L1 7637 7702 -106 876 136 0 0 chr20 6637661 6637793 -65516089 + AluJb SINE Alu 2 133 -179 375 169 0 0 chr20 6637793 6637864 -65516018 + GA-rich Low_complexity Low_complexity 2 72 0 1133 204 11 8 chr20 6637864 6638124 -65515758 + L1MC4 LINE L1 7782 8042 0 2145 93 3 0 chr20 6638648 6638939 -65514943 - AluY SINE Alu -19 292 1 673 256 24 104 chr20 6638940 6639179 -65514703 - L1M4 LINE L1 -1196 4950 4762 1819 176 0 3 chr20 6639179 6639492 -65514390 - AluJb SINE Alu 0 312 1 673 256 24 104 chr20 6639492 6639702 -65514180 - L1M4 LINE L1 -1384 4762 4537 180 0 0 0 chr20 6639718 6639738 -65514144 + (T)n Simple_repeat Simple_repeat 1 20 0 397 186 14 0 chr20 6639743 6639813 -65514069 - AluJ/FLAM SINE Alu -231 71 1 892 209 107 111 chr20 6640049 6640517 -65513365 - LTR33A LTR ERVL -51 472 7 1512 170 30 7 chr20 6640852 6641123 -65512759 + AluJo SINE Alu 13 289 -23 346 214 22 22 chr20 6641144 6641233 -65512649 - MLT1H LTR MaLR -460 89 1 200 292 0 0 chr20 6641609 6641657 -65512225 + (TATG)n Simple_repeat Simple_repeat 4 51 0 282 242 194 0 chr20 6642107 6642229 -65511653 + Charlie4 DNA MER1_type 177 1774 -187 471 48 0 0 chr20 6642230 6642292 -65511590 + (CA)n Simple_repeat Simple_repeat 2 63 0 1957 124 0 20 chr20 6642317 6642615 -65511267 + AluSc SINE Alu 1 292 -17 250 261 0 15 chr20 6642619 6642684 -65511198 + Charlie4 DNA MER1_type 1898 1961 0 1206 256 80 6 chr20 6642894 6643257 -65510625 + L2 LINE L2 1890 2279 -1035 921 230 80 13 chr20 6643262 6643501 -65510381 + MIR SINE MIR 8 262 0 297 354 164 3 chr20 6643518 6643823 -65510059 - L2 LINE L2 -983 2331 1978 186 344 42 91 chr20 6643917 6644202 -65509680 + L2 LINE L2 2919 3189 -83 389 311 24 6 chr20 6644204 6644307 -65509575 + (CAT)n Simple_repeat Simple_repeat 1 110 -57 2179 107 3 10 chr20 6644307 6644615 -65509267 - AluSq SINE Alu -7 306 1 389 311 24 6 chr20 6644615 6644675 -65509207 + (CAT)n Simple_repeat Simple_repeat 110 167 0 315 131 0 71 chr20 6644679 6644778 -65509104 + (CACCAT)n Simple_repeat Simple_repeat 6 97 0 317 248 43 60 chr20 6644800 6644917 -65508965 - MIR SINE MIR -27 235 121 417 293 47 26 chr20 6645934 6646125 -65507757 - MIR3 SINE MIR 0 208 14 526 243 155 0 chr20 6646612 6646760 -65507122 + MIR SINE MIR 3 173 -89 33 43 0 0 chr20 6649451 6649498 -65504384 + AT_rich Low_complexity Low_complexity 1 47 0 2457 109 11 22 chr20 6649509 6649868 -65504014 + THE1A LTR MaLR 1 355 0 311 133 19 133 chr20 6649917 6650022 -65503860 + L1ME4a LINE L1 5975 6067 -54 683 178 85 0 chr20 6650628 6650757 -65503125 + FLAM_C SINE Alu 1 140 -3 277 198 270 9 chr20 6651379 6651490 -65502392 - MIR SINE MIR -17 245 106 2070 118 0 16 chr20 6651546 6651850 -65502032 - AluSx SINE Alu -13 299 1 805 275 42 72 chr20 6652358 6652693 -65501189 - LTR16C LTR ERVL -5 486 162 224 302 177 10 chr20 6652886 6652982 -65500900 + L2 LINE L2 3199 3310 -3 436 270 48 48 chr20 6653344 6653470 -65500412 - MIR3 SINE MIR -1 207 82 226 360 46 26 chr20 6654412 6654565 -65499317 + MIR3 SINE MIR 3 158 -50 185 278 45 90 chr20 6654568 6654701 -65499181 - L2 LINE L2 -9 3263 3137 299 374 37 0 chr20 6654745 6654852 -65499030 + L2 LINE L2 3151 3261 -11 2089 107 7 3 chr20 6654852 6655151 -65498731 + AluSq SINE Alu 1 300 -13 1868 178 93 137 chr20 6655429 6655614 -65498268 + L1ME3 LINE L1 5343 5534 -628 376 212 7 11 chr20 6655614 6655706 -65498176 - FLAM SINE Alu -10 123 60 1868 178 93 137 chr20 6655706 6656105 -65497777 + L1ME3 LINE L1 5534 5987 -175 199 266 133 8 chr20 6656170 6656298 -65497584 - L2 LINE L2 -302 2970 2827 889 225 117 57 chr20 6656355 6656741 -65497141 + MLT1I LTR MaLR 1 409 0 391 258 189 30 chr20 6656777 6656909 -65496973 - L2 LINE L2 0 3313 3161 37 0 0 0 chr20 6656921 6656958 -65496924 + AT_rich Low_complexity Low_complexity 1 37 0 210 232 207 66 chr20 6656968 6657166 -65496716 - L2 LINE L2 -159 3154 2929 521 266 106 29 chr20 6657167 6657374 -65496508 - L2 LINE L2 -605 2709 2487 773 178 66 116 chr20 6657374 6657540 -65496342 + MLT1D LTR MaLR 1 153 -352 2320 79 3 9 chr20 6657540 6657855 -65496027 - AluSp SINE Alu 0 313 1 773 178 66 116 chr20 6657855 6657930 -65495952 + MLT1D LTR MaLR 153 230 -275 1348 153 96 0 chr20 6657933 6658162 -65495720 + AluJb SINE Alu 1 251 -61 809 281 191 12 chr20 6658174 6658662 -65495220 - L2 LINE L2 -1007 2307 1733 2190 251 18 30 chr20 6658690 6658753 -65495129 - MLT1H1 LTR MaLR 0 555 493 3603 152 25 17 chr20 6658753 6658957 -65494925 - MER6A DNA MER2_type -260 605 404 2128 109 0 3 chr20 6658957 6659259 -65494623 + AluSg SINE Alu 1 301 -9 3603 152 25 17 chr20 6659259 6659654 -65494228 - MER6A DNA MER2_type -461 404 1 2190 251 18 30 chr20 6659654 6660090 -65493792 - MLT1H1 LTR MaLR -62 493 61 2095 100 7 3 chr20 6660090 6660391 -65493491 - AluSx SINE Alu -10 302 1 2190 251 18 30 chr20 6660391 6660452 -65493430 - MLT1H1 LTR MaLR -494 61 1 241 298 262 19 chr20 6660459 6660768 -65493114 - L2 LINE L2 -1635 1679 1296 183 256 128 64 chr20 6660903 6661028 -65492854 - MIR SINE MIR -8 254 122 444 266 100 57 chr20 6661239 6661322 -65492560 + MARNA DNA Mariner 129 207 -379 225 0 0 0 chr20 6661322 6661347 -65492535 + (CA)n Simple_repeat Simple_repeat 1 25 0 444 266 100 57 chr20 6661347 6661564 -65492318 + MARNA DNA Mariner 207 442 -144 302 221 53 32 chr20 6661805 6661900 -65491982 - MLT1L LTR MaLR -2 613 517 * 589 235 126 75 chr20 6661898 6662226 -65491656 - MLT1L LTR MaLR -238 288 1 1855 166 3 3 chr20 6662300 6662601 -65491281 + AluJb SINE Alu 1 301 -11 329 248 64 0 chr20 6663304 6663413 -65490469 + MIR SINE MIR 12 127 -135 636 187 216 18 chr20 6663416 6663587 -65490295 - MER63A DNA MER1_type -5 205 1 1993 107 0 0 chr20 6664048 6664300 -65489582 - AluSp SINE Alu -61 252 1 350 195 3 111 chr20 6664478 6664605 -65489277 - MLT1F1 LTR MaLR 0 567 434 1821 203 47 18 chr20 6665053 6665334 -65488548 - MLT1C LTR MaLR 0 467 167 2058 125 3 7 chr20 6665334 6665629 -65488253 - AluSq SINE Alu -19 294 1 1821 203 47 18 chr20 6665629 6665796 -65488086 - MLT1C LTR MaLR -300 167 6 442 177 0 0 chr20 6666019 6666098 -65487784 + MER96 DNA MER1_type? 97 175 0 220 118 333 0 chr20 6666099 6666150 -65487732 - MER5A DNA MER1_type -113 76 9 254 96 0 19 chr20 6666624 6666676 -65487206 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 358 221 0 0 chr20 6666708 6666776 -65487106 - FRAM SINE Alu -24 142 75 911 128 16 0 chr20 6667270 6667395 -65486487 - FLAM_C SINE Alu -16 127 1 210 23 45 45 chr20 6667462 6667506 -65486376 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 2224 80 7 0 chr20 6667513 6667789 -65486093 - AluSp SINE Alu -35 278 1 1836 145 38 7 chr20 6668117 6668407 -65485475 - AluJo SINE Alu -13 299 1 2393 77 3 16 chr20 6668575 6668886 -65484996 + AluSp SINE Alu 7 313 0 184 217 167 0 chr20 6669124 6669184 -65484698 + MIR SINE MIR 71 140 -68 198 0 0 0 chr20 6669337 6669359 -65484523 + (TG)n Simple_repeat Simple_repeat 2 23 0 2273 108 7 3 chr20 6672486 6672793 -65481089 - AluSx SINE Alu -4 308 1 860 196 17 6 chr20 6672911 6673084 -65480798 - MER5B DNA MER1_type -3 175 1 1216 138 60 112 chr20 6673305 6673573 -65480309 - AluJo SINE Alu -29 283 30 637 276 199 8 chr20 6674648 6675114 -65478768 - L2 LINE L2 -4 3309 2749 773 206 0 0 chr20 6675132 6675258 -65478624 - FLAM_C SINE Alu -14 129 4 2790 241 65 33 chr20 6675260 6675818 -65478064 - L2 LINE L2 -567 2747 2143 1369 197 88 7 chr20 6675818 6676102 -65477780 + AluJo SINE Alu 1 307 -5 2790 241 65 33 chr20 6676102 6676531 -65477351 - L2 LINE L2 -1171 2143 1729 2038 138 6 13 chr20 6677461 6677773 -65476109 - AluSx SINE Alu -2 310 1 720 144 0 0 chr20 6678360 6678471 -65475411 + FLAM_C SINE Alu 1 111 -32 201 39 0 0 chr20 6678507 6678533 -65475349 + (A)n Simple_repeat Simple_repeat 1 26 0 2009 158 3 0 chr20 6679509 6679806 -65474076 - AluSx SINE Alu -14 298 1 1934 134 17 3 chr20 6680382 6680672 -65473210 + AluSx SINE Alu 1 294 -18 2321 88 0 10 chr20 6680674 6680969 -65472913 + AluSc SINE Alu 3 294 -15 2236 112 146 8 chr20 6681366 6681742 -65472140 + MSTA LTR MaLR 1 428 0 568 272 68 19 chr20 6681746 6681952 -65471930 + MLT1H LTR MaLR 36 251 -298 2185 114 0 10 chr20 6682119 6682416 -65471466 - AluSx SINE Alu -10 302 9 2298 94 17 0 chr20 6683440 6683737 -65470145 - AluSx SINE Alu -10 302 1 266 315 43 27 chr20 6684099 6684283 -65469599 + MIR SINE MIR 44 230 -32 2325 89 0 0 chr20 6684895 6685186 -65468696 - AluSc SINE Alu -18 291 1 1039 189 82 0 chr20 6685313 6685509 -65468373 + AluJo SINE Alu 28 239 -73 28 0 0 0 chr20 6685537 6685565 -65468317 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr20 6685597 6685627 -65468255 + AT_rich Low_complexity Low_complexity 1 30 0 2189 125 3 0 chr20 6685696 6686001 -65467881 + AluSx SINE Alu 2 307 -5 2164 125 0 7 chr20 6686038 6686343 -65467539 - AluSx SINE Alu -7 305 3 1284 101 0 28 chr20 6686751 6686930 -65466952 - AluSg/x SINE Alu -13 297 124 2053 144 7 0 chr20 6687076 6687368 -65466514 + AluJb SINE Alu 1 294 -18 470 321 46 25 chr20 6687394 6687631 -65466251 - L1MEd LINE L1 -5635 484 243 28 48 0 0 chr20 6687857 6687899 -65465983 + AT_rich Low_complexity Low_complexity 1 42 0 195 302 52 42 chr20 6687913 6688009 -65465873 - MIR3 SINE MIR -28 180 84 201 305 0 0 chr20 6688040 6688099 -65465783 + CT-rich Low_complexity Low_complexity 1 59 0 2270 126 3 0 chr20 6688488 6688798 -65465084 + AluSx SINE Alu 1 311 -1 665 254 57 10 chr20 6689420 6689613 -65464269 - MIR SINE MIR -12 250 49 621 179 0 9 chr20 6689863 6689975 -65463907 - MER3 DNA MER1_type 0 209 99 264 233 105 38 chr20 6690040 6690173 -65463709 + L1ME3A LINE L1 6029 6170 0 1621 163 4 0 chr20 6691057 6691302 -65462580 + AluJb SINE Alu 1 246 -66 1976 148 7 10 chr20 6692617 6692927 -65460955 - AluJb SINE Alu -3 309 1 524 263 60 50 chr20 6693088 6693369 -65460513 + L1MB4 LINE L1 4562 4845 -1301 45 0 0 0 chr20 6693369 6693414 -65460468 + AT_rich Low_complexity Low_complexity 1 45 0 3313 172 51 22 chr20 6693563 6693934 -65459948 + L1MB4 LINE L1 5428 5826 -354 2206 107 7 7 chr20 6693934 6694233 -65459649 + AluSq SINE Alu 1 299 -14 3313 172 51 22 chr20 6694233 6694489 -65459393 + L1MB4 LINE L1 5826 6073 -107 1354 181 61 34 chr20 6694538 6694817 -65459065 + AluJo SINE Alu 12 301 -11 693 114 70 0 chr20 6694817 6694931 -65458951 + L1MB4 LINE L1 6059 6180 0 1354 181 61 34 chr20 6694931 6694944 -65458938 + AluJo SINE Alu 301 312 0 2431 176 28 24 chr20 6694948 6695442 -65458440 + L1MB7 LINE L1 5681 6176 -8 28 71 0 0 chr20 6695658 6695714 -65458168 + AT_rich Low_complexity Low_complexity 1 56 0 479 279 60 50 chr20 6695716 6696014 -65457868 + L1ME LINE L1 5258 5558 -604 2160 118 0 10 chr20 6696463 6696769 -65457113 - AluSx SINE Alu -9 303 1 328 82 0 0 chr20 6696793 6696842 -65457040 - L1MB3 LINE L1 -4 6179 6131 870 127 0 0 chr20 6696852 6696978 -65456904 - FRAM SINE Alu -23 153 28 2433 97 0 0 chr20 6697212 6697520 -65456362 + AluSx SINE Alu 5 312 0 1009 254 140 29 chr20 6697998 6698411 -65455471 - L1MC4a LINE L1 -1888 5920 5462 309 277 0 27 chr20 6698421 6698533 -65455349 - L1MC4a LINE L1 -2444 5364 5256 2192 128 0 0 chr20 6698686 6698984 -65454898 - AluSq SINE Alu -15 298 1 913 254 110 18 chr20 6700126 6700527 -65453355 + Charlie4a DNA MER1_type 3 440 -68 208 300 0 0 chr20 6700544 6700594 -65453288 + L2 LINE L2 3246 3295 -18 207 0 0 0 chr20 6700863 6700886 -65452996 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2342 117 0 0 chr20 6701729 6702038 -65451844 + AluSg SINE Alu 1 309 -1 1281 133 27 106 chr20 6702570 6702667 -65451215 + MER46A DNA MER2_type 1 104 -2627 1980 138 0 0 chr20 6702667 6702979 -65450903 - AluSx SINE Alu 0 312 1 1281 133 27 106 chr20 6702979 6703136 -65450746 + MER46A DNA MER2_type 104 236 0 2144 117 13 13 chr20 6703341 6703640 -65450242 + AluSx SINE Alu 1 299 -13 500 185 229 13 chr20 6703745 6703902 -65449980 + MER3 DNA MER1_type 6 196 -13 2351 98 0 7 chr20 6704431 6704737 -65449145 + AluSp SINE Alu 1 304 -9 731 183 0 0 chr20 6705458 6705573 -65448309 + FLAM_A SINE Alu 1 115 -18 207 0 0 0 chr20 6705576 6705599 -65448283 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1170 142 0 0 chr20 6705749 6705918 -65447964 - AluSg/x SINE Alu -11 299 131 2271 131 0 0 chr20 6706163 6706475 -65447407 + AluSx SINE Alu 1 312 0 1812 166 3 41 chr20 6706670 6706989 -65446893 - AluJb SINE Alu -5 307 1 21 0 0 0 chr20 6707441 6707462 -65446420 + AT_rich Low_complexity Low_complexity 1 21 0 258 217 78 54 chr20 6707681 6707810 -65446072 - L1MC5 LINE L1 -46 7915 7784 2395 92 57 20 chr20 6707823 6708172 -65445710 + THE1B LTR MaLR 1 362 -2 787 231 166 21 chr20 6708330 6708717 -65445165 + LTR16C LTR ERVL 19 486 -5 194 326 163 0 chr20 6709472 6709564 -65444318 - L2 LINE L2 0 3272 3166 624 211 58 63 chr20 6709648 6709871 -65444011 + L2 LINE L2 3092 3313 0 952 92 7 21 chr20 6711046 6711188 -65442694 + L1PA7 LINE L1 6008 6147 -7 222 177 16 16 chr20 6711195 6711257 -65442625 + A-rich Low_complexity Low_complexity 2 63 0 2090 135 3 3 chr20 6711260 6711556 -65442326 + AluSq SINE Alu 1 296 -17 2206 80 0 15 chr20 6712091 6712249 -65441633 - AluSx SINE Alu -21 291 137 2235 87 0 0 chr20 6712249 6712524 -65441358 - AluSg SINE Alu -14 296 22 2206 80 0 15 chr20 6712524 6712639 -65441243 - AluSx SINE Alu -175 137 22 1166 67 0 0 chr20 6712640 6712775 -65441107 - AluSq/x SINE Alu -177 135 1 1706 219 145 46 chr20 6712775 6713364 -65440518 + L1ME3A LINE L1 5514 6160 -10 445 240 62 76 chr20 6713373 6713598 -65440284 + MER113 DNA MER1_type? 135 356 -165 2089 123 0 0 chr20 6713760 6714061 -65439821 - AluSx SINE Alu -11 301 1 245 261 0 15 chr20 6714774 6714839 -65439043 - L1ME2 LINE L1 -9 6155 6092 247 162 162 14 chr20 6715592 6715666 -65438216 - MER5A DNA MER1_type -77 112 28 2396 92 3 0 chr20 6715929 6716233 -65437649 - AluSg SINE Alu -5 305 1 486 252 59 15 chr20 6716467 6716602 -65437280 - MIR3 SINE MIR -63 145 5 272 286 10 61 chr20 6718532 6718630 -65435252 - L2 LINE L2 -1 3271 3179 189 200 0 0 chr20 6718636 6718671 -65435211 + MIR SINE MIR 121 155 -107 345 24 0 0 chr20 6719064 6719106 -65434776 + (CA)n Simple_repeat Simple_repeat 1 42 0 1833 102 91 11 chr20 6719110 6719375 -65434507 - AluSc SINE Alu -23 286 1 402 194 14 0 chr20 6719597 6719669 -65434213 - L1ME3A LINE L1 -26 6144 6072 821 209 8 20 chr20 6719750 6719969 -65433913 - L1ME3A LINE L1 -172 6012 5835 1240 163 206 0 chr20 6719976 6720228 -65433654 - AluJo SINE Alu -8 304 1 696 208 15 8 chr20 6720946 6721076 -65432806 + AluJ SINE Alu 3 133 -179 757 40 101 0 chr20 6721088 6721187 -65432695 + L1PA11 LINE L1 6064 6172 -2 1255 134 0 21 chr20 6721192 6721378 -65432504 + AluJ SINE Alu 122 303 -9 259 257 30 40 chr20 6722251 6722352 -65431530 - L1MC4a LINE L1 -1875 5933 5834 520 281 68 51 chr20 6722356 6722591 -65431291 + LTR67 LTR ERVL 23 261 -296 31 0 0 0 chr20 6723507 6723538 -65430344 + AT_rich Low_complexity Low_complexity 1 31 0 350 250 29 10 chr20 6723754 6723858 -65430024 + MLT1H LTR MaLR 50 155 -394 1174 210 36 0 chr20 6723955 6724207 -65429675 + L1MC4a LINE L1 6737 6997 -811 272 244 93 23 chr20 6724248 6724334 -65429548 - MIR SINE MIR -148 114 23 768 254 98 10 chr20 6724384 6724577 -65429305 + MER82 DNA MER2_type 444 653 0 263 219 29 48 chr20 6724579 6724684 -65429198 + HAL1 LINE L1 2333 2435 -72 195 100 0 0 chr20 6725093 6725123 -65428759 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 751 252 79 4 chr20 6725192 6725401 -65428481 - MIR SINE MIR -19 243 22 193 338 13 0 chr20 6725572 6725649 -65428233 + L2 LINE L2 2935 3012 -260 261 0 0 0 chr20 6725938 6725967 -65427915 + (T)n Simple_repeat Simple_repeat 1 29 0 600 271 21 2 chr20 6726123 6726307 -65427575 - L1MC4a LINE L1 -436 5685 5515 1364 190 41 14 chr20 6726776 6727066 -65426816 + MLT1C LTR MaLR 1 298 -169 1464 198 100 18 chr20 6727081 6727291 -65426591 - MLT1A1 LTR MaLR 0 365 117 2297 94 3 0 chr20 6727291 6727588 -65426294 - AluSx SINE Alu -14 298 1 1464 198 100 18 chr20 6727588 6727706 -65426176 - MLT1A1 LTR MaLR -248 117 10 402 232 120 16 chr20 6727720 6727845 -65426037 + MLT1C LTR MaLR 318 455 -12 1147 273 54 31 chr20 6728423 6728749 -65425133 + LTR16C LTR ERVL 77 415 -76 2485 117 24 24 chr20 6728749 6729124 -65424758 + THE1C LTR MaLR 1 375 0 1147 273 54 31 chr20 6729124 6729185 -65424697 + LTR16C LTR ERVL 415 473 -18 3365 165 59 50 chr20 6729387 6730061 -65423821 + MER54B LTR ERVL 1 680 -113 539 283 165 31 chr20 6730273 6730595 -65423287 - LTR16A1 LTR ERVL 0 457 93 2507 117 150 91 chr20 6730769 6731040 -65422842 - L1MA5A LINE L1 -5 6292 6038 543 101 13 0 chr20 6731040 6731119 -65422763 + MADE1 DNA Mariner 1 80 0 2507 117 150 91 chr20 6731119 6731421 -65422461 - L1MA5A LINE L1 -259 6038 5685 241 259 0 0 chr20 6731599 6731653 -65422229 - L2 LINE L2 -3 3269 3216 279 377 7 7 chr20 6731795 6731941 -65421941 + (TCCA)n Simple_repeat Simple_repeat 1 146 0 399 237 19 90 chr20 6731991 6732147 -65421735 - L2 LINE L2 0 3313 3169 269 312 110 9 chr20 6732329 6732438 -65421444 + L2 LINE L2 3147 3266 -6 1605 118 24 115 chr20 6732523 6732861 -65421021 + AluYb8 SINE Alu 1 307 -11 1844 169 0 7 chr20 6733247 6733554 -65420328 + AluJb SINE Alu 1 305 -7 255 278 58 58 chr20 6734027 6734232 -65419650 - L1ME4a LINE L1 -83 6038 5834 3522 73 11 5 chr20 6734297 6734738 -65419144 - L1PA8 LINE L1 -1 6171 5728 587 260 18 96 chr20 6735091 6735258 -65418624 - MIR SINE MIR -25 237 89 1550 104 0 0 chr20 6735258 6735469 -65418413 + L1MA2 LINE L1 6094 6304 0 587 260 18 96 chr20 6735469 6735520 -65418362 - MIR SINE MIR -173 89 36 757 179 164 24 chr20 6735799 6736006 -65417876 - MLT1K LTR MaLR -23 565 330 258 289 127 42 chr20 6736071 6736213 -65417669 - MLT1K LTR MaLR -419 169 16 406 182 265 15 chr20 6736237 6736369 -65417513 + MER5A DNA MER1_type 18 182 -7 554 261 111 56 chr20 6736526 6736760 -65417122 + MER115 DNA AcHobo 1 247 -446 1847 151 14 0 chr20 6737728 6738019 -65415863 - AluJb SINE Alu -11 301 7 1350 182 62 140 chr20 6738093 6738257 -65415625 + Charlie4a DNA MER1_type 46 221 -1740 6748 85 30 0 chr20 6738257 6738633 -65415249 - L1PA13 LINE L1 -11 6152 5789 2510 50 0 7 chr20 6738633 6738933 -65414949 - AluY SINE Alu -11 300 3 6748 85 30 0 chr20 6738933 6740006 -65413876 - L1PA13 LINE L1 -374 5789 4697 1350 182 62 140 chr20 6740006 6740300 -65413582 + Charlie4a DNA MER1_type 221 464 -1497 2108 186 80 57 chr20 6740300 6740790 -65413092 + MLT1D LTR MaLR 5 505 0 1350 182 62 140 chr20 6740790 6740830 -65413052 + Charlie4a DNA MER1_type 464 506 -2 1646 229 20 0 chr20 6740904 6741245 -65412637 - MLT1F1 LTR MaLR -8 559 212 411 133 0 0 chr20 6741240 6741300 -65412582 - MLT1F1 LTR MaLR -507 60 1 * 1101 166 0 83 chr20 6741553 6741766 -65412116 - L1MC3 LINE L1 0 7785 7593 1968 134 53 0 chr20 6741766 6742050 -65411832 - AluSx SINE Alu -13 299 1 1101 166 0 83 chr20 6742050 6742077 -65411805 - L1MC3 LINE L1 -192 7593 7565 424 250 62 131 chr20 6742173 6742417 -65411465 + MIR SINE MIR 5 231 -31 4691 169 56 8 chr20 6742724 6743583 -65410299 + MER54A LTR ERVL 2 901 0 2128 137 0 13 chr20 6744294 6744609 -65409273 - AluSq SINE Alu -2 311 1 2097 206 45 13 chr20 6745404 6745632 -65408250 - MER65C LTR ERV1 0 461 242 2881 143 2 25 chr20 6745632 6746074 -65407808 - MSTB1 LTR MaLR 0 432 1 2097 206 45 13 chr20 6746074 6746292 -65407590 - MER65C LTR ERV1 -219 242 1 14589 233 26 17 chr20 6746328 6747729 -65406153 - L1PA16 LINE L1 0 7604 6217 1935 154 57 46 chr20 6747729 6748100 -65405782 - THE1C LTR MaLR 0 375 1 14589 233 26 17 chr20 6748100 6750480 -65403402 - L1PA16 LINE L1 -1387 6217 3806 2260 112 0 7 chr20 6750480 6750785 -65403097 - AluSq SINE Alu -10 303 1 14589 233 26 17 chr20 6750785 6752403 -65401479 - L1PA16 LINE L1 -3798 3806 2204 465 293 28 22 chr20 6752670 6752851 -65401031 - L1PA16 LINE L1 -5276 2298 2117 1357 310 40 28 chr20 6752878 6753455 -65400427 - L1PA16 LINE L1 -6203 1371 788 1726 126 20 0 chr20 6754215 6754470 -65399412 + Tigger5 DNA MER2_type 2063 2322 -1 246 128 0 0 chr20 6754473 6754512 -65399370 + (TG)n Simple_repeat Simple_repeat 2 40 0 2204 206 37 57 chr20 6754518 6754725 -65399157 - L1MCb LINE L1 -4851 1194 984 1859 164 0 3 chr20 6754725 6755017 -65398865 + AluSx SINE Alu 1 291 -21 2204 206 37 57 chr20 6755017 6755784 -65398098 - L1MCb LINE L1 -5061 984 571 955 275 42 70 chr20 6755841 6756267 -65397615 - L1MCb LINE L1 -5444 601 188 1924 133 59 6 chr20 6756267 6756590 -65397292 + L1MA5 LINE L1 5956 6295 -5 10337 216 44 12 chr20 6756632 6758430 -65395452 + L1M4c LINE L1 2053 3975 -2407 186 43 0 0 chr20 6758430 6758453 -65395429 + (CAA)n Simple_repeat Simple_repeat 2 24 0 10337 216 44 12 chr20 6758453 6759431 -65394451 + L1M4c LINE L1 3975 4920 -1462 1163 164 21 0 chr20 6759435 6759624 -65394258 + MSTB LTR MaLR 5 197 -229 185 299 51 56 chr20 6762872 6763069 -65390813 + L3b LINE CR1 1145 1340 -243 1315 136 45 45 chr20 6763559 6763802 -65390080 + MSTB LTR MaLR 184 426 0 5681 174 17 15 chr20 6763802 6764174 -65389708 + L1MA9 LINE L1 4916 5286 -1262 2382 88 0 23 chr20 6764174 6764480 -65389402 + AluSq SINE Alu 1 299 -14 5681 174 17 15 chr20 6764480 6765731 -65388151 + L1MA9 LINE L1 5286 6541 -7 501 244 5 67 chr20 6765906 6766099 -65387783 + HAL1 LINE L1 1979 2159 -348 2335 204 34 28 chr20 6766118 6766617 -65387265 - MLT1F1 LTR MaLR -65 502 1 261 308 10 0 chr20 6766627 6766731 -65387151 + L1ME LINE L1 4232 4336 -1810 1063 272 98 34 chr20 6766822 6767739 -65386143 + L1ME LINE L1 4616 5585 -577 291 381 42 0 chr20 6767851 6768019 -65385863 - L2 LINE L2 -923 2391 2217 1988 123 3 36 chr20 6768274 6768582 -65385300 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 6769011 6769032 -65384850 + AT_rich Low_complexity Low_complexity 1 21 0 27191 28 3 0 chr20 6769383 6773207 -65380675 - L1PA2 LINE L1 0 6155 2323 295 287 115 8 chr20 6773462 6773584 -65380298 + MER46C DNA MER2_type 142 276 -62 232 254 45 0 chr20 6773767 6773834 -65380048 - L2 LINE L2 -222 3050 2981 539 256 186 6 chr20 6773986 6774142 -65379740 - MER5A DNA MER1_type 0 189 6 235 233 41 14 chr20 6774142 6774154 -65379728 + MER3 DNA MER1_type 36 49 -160 308 177 25 38 chr20 6774154 6774233 -65379649 - MER3 DNA MER1_type 0 209 132 775 117 0 42 chr20 6774240 6774360 -65379522 + AluSg/x SINE Alu 189 303 -7 592 215 0 0 chr20 6774396 6774503 -65379379 - MER3 DNA MER1_type -93 116 10 1830 189 147 76 chr20 6774634 6775163 -65378719 + MLT1F1 LTR MaLR 1 567 0 684 242 81 10 chr20 6775163 6775361 -65378521 - MIR SINE MIR -43 219 8 354 176 59 209 chr20 6775453 6775521 -65378361 + MER5B DNA MER1_type 17 94 -84 1533 38 0 5 chr20 6775521 6775706 -65378176 + AluY SINE Alu 123 306 -5 354 176 59 209 chr20 6775706 6775824 -65378058 + MER5B DNA MER1_type 94 175 -3 206 281 31 16 chr20 6775873 6775937 -65377945 + MER5A DNA MER1_type 124 188 -1 907 199 11 0 chr20 6776807 6776988 -65376894 - MER5A DNA MER1_type -6 183 1 814 273 27 12 chr20 6777007 6777263 -65376619 + MIR SINE MIR 1 260 -2 3235 159 27 68 chr20 6777425 6778276 -65375606 + LTR1 LTR ERV1 9 785 0 1097 315 54 10 chr20 6779306 6779712 -65374170 + LTR16C LTR ERVL 68 491 0 668 300 76 38 chr20 6780185 6780528 -65373354 - MLT1I LTR MaLR -1 408 53 180 0 0 0 chr20 6780732 6780752 -65373130 + (A)n Simple_repeat Simple_repeat 1 20 0 266 281 123 9 chr20 6781263 6781377 -65372505 - MLT1L LTR MaLR -24 591 465 933 276 87 14 chr20 6781406 6781761 -65372121 - MLT1L LTR MaLR -221 394 14 967 270 98 55 chr20 6781814 6782251 -65371631 - LTR16A1 LTR ERVL -1 456 1 486 0 0 0 chr20 6783228 6783282 -65370600 + (TA)n Simple_repeat Simple_repeat 1 54 0 378 0 0 0 chr20 6783281 6783323 -65370559 + (GA)n Simple_repeat Simple_repeat 2 43 0 * 262 300 12 0 chr20 6783404 6783484 -65370398 + L2 LINE L2 3192 3272 0 3713 72 5 5 chr20 6784878 6785322 -65368560 + MLT2A1 LTR ERVL 1 444 0 610 221 22 7 chr20 6785544 6785680 -65368202 - MER5B DNA MER1_type -16 162 25 198 238 48 16 chr20 6785625 6785688 -65368194 + MER5A DNA MER1_type 109 173 -16 * 203 286 193 8 chr20 6785991 6786110 -65367772 + MER5B DNA MER1_type 3 143 -35 276 247 68 0 chr20 6786970 6787043 -65366839 + HAL1 LINE L1 54 131 -2376 1527 253 150 82 chr20 6787047 6788084 -65365798 + HAL1 LINE L1 432 1539 -968 336 282 0 21 chr20 6788113 6788209 -65365673 + MLT1F1 LTR MaLR 1 94 -466 1002 199 129 48 chr20 6788213 6788305 -65365577 + MLT1A2 LTR MaLR 1 84 -290 1986 153 0 3 chr20 6788305 6788612 -65365270 + AluSx SINE Alu 1 306 -6 1002 199 129 48 chr20 6788612 6788851 -65365031 + MLT1A2 LTR MaLR 84 359 -15 1436 191 83 81 chr20 6788868 6789335 -65364547 + MLT1F1 LTR MaLR 95 562 -5 1209 240 117 80 chr20 6789335 6789808 -65364074 + HAL1 LINE L1 1607 2061 -446 2875 150 26 24 chr20 6789808 6790274 -65363608 - MLT1C LTR MaLR 0 467 1 1209 240 117 80 chr20 6790274 6790505 -65363377 + HAL1 LINE L1 2061 2340 -167 1637 121 4 0 chr20 6790505 6790736 -65363146 + AluSg/x SINE Alu 79 310 0 1209 240 117 80 chr20 6790736 6790751 -65363131 + HAL1 LINE L1 2340 2353 -154 327 141 14 84 chr20 6790751 6790796 -65363086 + LTR67 LTR ERVL 492 532 -25 1621 230 100 66 chr20 6790796 6791327 -65362555 + MLT1H LTR MaLR 1 549 0 327 141 14 84 chr20 6791327 6791352 -65362530 + LTR67 LTR ERVL 532 557 0 2922 3 0 0 chr20 6791842 6792153 -65361729 - AluYa5 SINE Alu 0 311 1 927 172 21 47 chr20 6792680 6792872 -65361010 + LTR41 LTR ERVL 1 187 -586 901 222 48 77 chr20 6793019 6793330 -65360552 + LTR41 LTR ERVL 465 766 -7 963 168 0 19 chr20 6793397 6793558 -65360324 - FRAM SINE Alu -24 152 1 1320 181 112 67 chr20 6793565 6793941 -65359941 + L1ME3A LINE L1 5621 6013 -157 1503 191 109 56 chr20 6793995 6794452 -65359430 + MER66A LTR ERV1 97 478 0 537 215 25 0 chr20 6794477 6794598 -65359284 + L1ME3A LINE L1 6027 6150 -20 31 0 0 0 chr20 6794598 6794629 -65359253 + AT_rich Low_complexity Low_complexity 1 31 0 1269 270 99 13 chr20 6794741 6795134 -65358748 - LTR16B LTR ERVL -4 460 34 1836 82 9 0 chr20 6795189 6795421 -65358461 + L1PA8 LINE L1 5939 6172 0 308 301 88 16 chr20 6795434 6795627 -65358255 + L1MB8 LINE L1 5693 5899 -279 1931 85 0 12 chr20 6795708 6795956 -65357926 + AluY SINE Alu 48 292 -19 1884 142 14 3 chr20 6796159 6796454 -65357428 - AluSx SINE Alu -1 311 14 472 304 88 21 chr20 6796823 6797017 -65356865 + MIR SINE MIR 11 217 -45 250 303 178 46 chr20 6798790 6798942 -65354940 + MIR SINE MIR 18 189 -73 360 0 0 0 chr20 6800199 6800239 -65353643 + (TG)n Simple_repeat Simple_repeat 2 41 0 821 60 30 15 chr20 6800242 6800375 -65353507 + (GAAA)n Simple_repeat Simple_repeat 4 138 0 1285 265 46 88 chr20 6800811 6801438 -65352444 + L1MCb LINE L1 1 601 -5444 2204 206 37 57 chr20 6801495 6802262 -65351620 + L1MCb LINE L1 571 1324 -5061 1859 164 0 3 chr20 6802262 6802554 -65351328 - AluSx SINE Alu -21 291 1 2204 206 37 57 chr20 6802554 6802761 -65351121 + L1MCb LINE L1 1324 1534 -4851 261 83 0 0 chr20 6802767 6802803 -65351079 + (CA)n Simple_repeat Simple_repeat 2 37 0 1726 126 20 0 chr20 6802811 6803066 -65350816 - Tigger5 DNA MER2_type -1 2322 2063 1388 309 40 28 chr20 6803826 6804403 -65349479 + L1PA13 LINE L1 788 1371 -6203 465 293 28 22 chr20 6804430 6804611 -65349271 + L1PA13 LINE L1 2117 2298 -5276 4990 227 44 25 chr20 6804878 6806495 -65347387 + L1PA13 LINE L1 2204 3799 -3785 2223 115 0 7 chr20 6806495 6806799 -65347083 + AluSq SINE Alu 1 302 -11 4990 227 44 25 chr20 6806799 6806934 -65346948 + L1PA13 LINE L1 3799 3930 -3654 867 221 178 98 chr20 6807345 6807435 -65346447 + MLT1F1 LTR MaLR 1 82 -513 2973 6 0 0 chr20 6807435 6807753 -65346129 + AluYb8 SINE Alu 1 318 0 867 221 178 98 chr20 6807753 6808213 -65345669 + MLT1F1 LTR MaLR 82 595 0 592 152 0 11 chr20 6808377 6808469 -65345413 + AluJb SINE Alu 209 299 -13 880 155 0 8 chr20 6808882 6809011 -65344871 - FLAM_A SINE Alu -5 128 1 874 265 76 64 chr20 6809048 6809164 -65344718 + L1ME3 LINE L1 4987 5100 -1062 2173 104 3 0 chr20 6809164 6809452 -65344430 - AluSp SINE Alu -24 289 1 874 265 76 64 chr20 6809452 6809662 -65344220 + L1ME3 LINE L1 5100 5306 -856 1053 185 0 0 chr20 6809662 6809819 -65344063 + FRAM SINE Alu 2 158 -8 874 265 76 64 chr20 6809819 6810135 -65343747 + L1ME3 LINE L1 5306 5657 -505 2262 79 0 0 chr20 6810135 6810415 -65343467 + AluSg SINE Alu 27 306 -4 874 265 76 64 chr20 6810415 6810597 -65343285 + L1ME3 LINE L1 5657 5835 -327 2284 83 7 0 chr20 6811726 6812015 -65341867 - AluSc SINE Alu -18 291 1 1292 139 93 9 chr20 6812363 6812579 -65341303 - MER46A DNA MER2_type 0 236 3 1604 148 112 11 chr20 6813413 6813690 -65340192 + AluSg1 SINE Alu 2 306 -3 2047 117 33 10 chr20 6814039 6814339 -65339543 + AluSc SINE Alu 1 307 -2 701 255 52 14 chr20 6815139 6815351 -65338531 - MIR SINE MIR -29 233 14 2509 64 0 0 chr20 6816333 6816629 -65337253 + AluY SINE Alu 1 296 -15 297 0 0 0 chr20 6816634 6816667 -65337215 + (CA)n Simple_repeat Simple_repeat 1 33 0 325 309 171 6 chr20 6816814 6816989 -65336893 + LTR50 LTR ERVL 16 219 -576 509 245 121 29 chr20 6817091 6817405 -65336477 + LTR33A LTR ERVL 307 507 -16 228 164 0 49 chr20 6818560 6818621 -65335261 + L1MC2 LINE L1 6276 6333 -11 2070 96 17 43 chr20 6820734 6821035 -65332847 - AluSx SINE Alu -19 293 1 752 143 0 9 chr20 6821422 6821534 -65332348 - AluJb SINE Alu -187 125 15 182 36 0 36 chr20 6821955 6821983 -65331899 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 659 200 0 0 chr20 6821985 6822100 -65331782 - AluSg/x SINE Alu -29 280 166 1291 164 24 0 chr20 6822125 6822332 -65331550 - AluJb SINE Alu -100 212 1 273 209 152 29 chr20 6822540 6822645 -65331237 - LTR33 LTR ERVL -38 483 366 422 293 117 46 chr20 6822851 6823090 -65330792 + MIR SINE MIR 1 256 -6 205 306 28 0 chr20 6823874 6823946 -65329936 + MIR SINE MIR 47 120 -88 378 328 66 8 chr20 6824026 6824270 -65329612 + MIR SINE MIR 5 262 0 26 0 0 0 chr20 6824312 6824338 -65329544 + AT_rich Low_complexity Low_complexity 1 26 0 893 272 192 17 chr20 6824445 6825155 -65328727 - L2 LINE L2 -14 3299 2453 27 73 0 0 chr20 6825993 6826048 -65327834 + AT_rich Low_complexity Low_complexity 1 55 0 1489 146 3 128 chr20 6829146 6829489 -65324393 + AluY SINE Alu 2 301 0 1017 245 111 58 chr20 6829792 6830224 -65323658 - LTR16B LTR ERVL 0 464 10 2432 84 3 6 chr20 6830593 6830904 -65322978 - AluSg SINE Alu 0 310 1 724 249 12 12 chr20 6831003 6831168 -65322714 + FRAM SINE Alu 1 165 -1 377 121 0 15 chr20 6831171 6831237 -65322645 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 225 250 0 0 chr20 6832302 6832378 -65321504 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2175 110 10 0 chr20 6832869 6833170 -65320712 + AluSx SINE Alu 1 304 -8 574 207 32 48 chr20 6833599 6833787 -65320095 - MER5A DNA MER1_type -2 187 3 186 71 0 0 chr20 6834635 6834663 -65319219 + (T)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr20 6834973 6834998 -65318884 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 2117 117 7 7 chr20 6835007 6835306 -65318576 + AluSx SINE Alu 1 299 -13 1127 179 83 67 chr20 6835370 6835683 -65318199 + MER58B DNA MER1_type 24 341 0 803 236 51 4 chr20 6835818 6836055 -65317827 + L2 LINE L2 1932 2179 -1135 2010 180 42 102 chr20 6836055 6836380 -65317502 - LTR55 LTR ERV -5 543 267 1973 131 0 11 chr20 6836380 6836662 -65317220 - AluJb SINE Alu -8 304 26 2010 180 42 102 chr20 6836662 6836913 -65316969 - LTR55 LTR ERV -281 267 2 1999 245 120 7 chr20 6836914 6837701 -65316181 + L2 LINE L2 2178 3047 -266 2181 105 7 3 chr20 6837810 6838104 -65315778 - AluSq SINE Alu -18 295 1 1496 215 111 14 chr20 6838341 6838765 -65315117 - MLT1C LTR MaLR 0 467 3 210 37 0 0 chr20 6839133 6839160 -65314722 + (TG)n Simple_repeat Simple_repeat 1 27 0 1107 263 27 58 chr20 6839436 6839696 -65314186 - LTR16C LTR ERVL -2 489 245 1965 204 12 46 chr20 6839696 6840177 -65313705 + MLT1C LTR MaLR 1 465 -2 1107 263 27 58 chr20 6840177 6840330 -65313552 - LTR16C LTR ERVL -246 245 89 986 170 131 5 chr20 6840567 6840773 -65313109 + MER34C LTR ERV1 1 232 -353 504 196 65 82 chr20 6842993 6843294 -65310588 + LTR48 LTR ERV1 378 781 -6 422 267 139 0 chr20 6843460 6843632 -65310250 - MIR SINE MIR -6 256 61 1937 153 10 3 chr20 6843650 6843944 -65309938 - AluJb SINE Alu -15 297 2 288 0 0 0 chr20 6843944 6843976 -65309906 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 474 18 0 0 chr20 6843975 6844030 -65309852 + (TA)n Simple_repeat Simple_repeat 1 55 0 1466 120 171 12 chr20 6844037 6844295 -65309587 - AluSg SINE Alu 0 300 2 638 191 191 0 chr20 6845250 6845407 -65308475 + MER5A DNA MER1_type 1 187 -2 588 221 104 12 chr20 6845627 6845790 -65308092 + MER5B DNA MER1_type 1 178 0 231 269 75 54 chr20 6848046 6848139 -65305743 - MIR3 SINE MIR 0 208 114 1072 119 52 174 chr20 6848763 6849108 -65304774 + MER33 DNA MER1_type 22 324 0 1423 188 104 20 chr20 6849398 6849743 -65304139 + MLT1A2 LTR MaLR 1 374 0 725 293 75 14 chr20 6850391 6850671 -65303211 + MER102a DNA MER1_type 2 298 -32 2381 100 0 0 chr20 6851257 6851568 -65302314 - AluY SINE Alu 0 311 1 1479 115 8 47 chr20 6851682 6851916 -65301966 - AluSg/x SINE Alu -4 306 82 2158 102 3 48 chr20 6851927 6852242 -65301640 - AluSq SINE Alu -8 305 5 444 298 60 18 chr20 6852870 6853038 -65300844 - MIR3 SINE MIR -1 207 33 482 214 145 0 chr20 6853950 6854081 -65299801 + L1ME3A LINE L1 6019 6168 -2 2070 109 32 3 chr20 6854086 6854370 -65299512 + AluSg SINE Alu 1 292 -18 29 60 0 0 chr20 6854726 6854776 -65299106 + AT_rich Low_complexity Low_complexity 1 50 0 2322 109 3 6 chr20 6856167 6856479 -65297403 + AluSx SINE Alu 1 311 -1 1076 141 61 5 chr20 6856708 6856906 -65296976 + L1MB7 LINE L1 5976 6184 0 24 32 0 0 chr20 6856929 6856960 -65296922 + AT_rich Low_complexity Low_complexity 1 31 0 228 67 0 0 chr20 6857438 6857468 -65296414 + (CA)n Simple_repeat Simple_repeat 2 31 0 303 128 244 23 chr20 6859958 6860009 -65293873 + L1MC4a LINE L1 7598 7636 -172 645 14 0 0 chr20 6860009 6860083 -65293799 + (TATTG)n Simple_repeat Simple_repeat 2 75 0 303 128 244 23 chr20 6860083 6860117 -65293765 + L1MC4a LINE L1 7636 7702 -106 883 137 8 0 chr20 6860118 6860249 -65293633 + AluSq/x SINE Alu 2 133 -179 375 169 0 0 chr20 6860249 6860320 -65293562 + GA-rich Low_complexity Low_complexity 2 72 0 1152 204 11 8 chr20 6860320 6860580 -65293302 + L1MC4 LINE L1 7782 8042 0 2272 93 3 0 chr20 6861104 6861395 -65292487 - AluY SINE Alu -19 292 1 674 251 24 104 chr20 6861396 6861635 -65292247 - L1M4 LINE L1 -1196 4950 4762 1935 176 0 3 chr20 6861635 6861948 -65291934 - AluJb SINE Alu 0 312 1 674 251 24 104 chr20 6861948 6862158 -65291724 - L1M4 LINE L1 -1384 4762 4537 180 0 0 0 chr20 6862174 6862194 -65291688 + (T)n Simple_repeat Simple_repeat 1 20 0 378 186 14 0 chr20 6862199 6862269 -65291613 - AluJ/FLAM SINE Alu -231 71 1 854 224 103 107 chr20 6862505 6862973 -65290909 - LTR33A LTR ERVL -51 472 7 1658 225 80 40 chr20 6864158 6864717 -65289165 - L1ME2 LINE L1 0 6164 5585 1599 188 26 3 chr20 6864717 6865020 -65288862 - AluJo SINE Alu -1 311 2 1658 225 80 40 chr20 6865020 6865054 -65288828 - L1ME2 LINE L1 -579 5585 5554 243 308 0 0 chr20 6865478 6865543 -65288339 + (CA)n Simple_repeat Simple_repeat 1 65 0 1771 186 0 3 chr20 6866552 6866843 -65287039 - AluJo SINE Alu -22 290 1 183 80 0 0 chr20 6866845 6866870 -65287012 + (TCTCCC)n Simple_repeat Simple_repeat 2 26 0 2336 96 20 0 chr20 6867333 6867635 -65286247 + AluSx SINE Alu 1 308 -4 520 292 53 19 chr20 6869000 6869209 -65284673 + MIR SINE MIR 47 262 0 7546 193 37 39 chr20 6869222 6871942 -65281940 - L1MB7 LINE L1 -7 6177 3464 1571 195 10 20 chr20 6871942 6872239 -65281643 - AluJb SINE Alu -8 304 11 7546 193 37 39 chr20 6872239 6872357 -65281525 - L1MB7 LINE L1 -2720 3464 3347 3240 266 60 18 chr20 6872366 6873655 -65280227 + L2 LINE L2 1942 3286 -27 208 156 0 0 chr20 6873842 6873874 -65280008 - L2 LINE L2 -22 3250 3219 232 309 36 0 chr20 6873933 6874017 -65279865 - L2 LINE L2 -25 3247 3161 564 221 60 70 chr20 6874270 6874469 -65279413 - MER63A DNA MER1_type -13 197 1 1500 212 78 47 chr20 6874610 6874845 -65279037 + MLT1C LTR MaLR 6 232 -235 479 84 127 0 chr20 6874845 6874916 -65278966 + MADE1 DNA Mariner 1 80 0 1500 212 78 47 chr20 6874916 6875128 -65278754 + MLT1C LTR MaLR 232 467 0 377 238 55 93 chr20 6875205 6875361 -65278521 - MIR SINE MIR -12 250 105 2213 103 3 39 chr20 6875361 6875673 -65278209 + AluSq SINE Alu 1 301 -12 377 238 55 93 chr20 6875673 6875765 -65278117 - MIR SINE MIR -157 105 11 631 117 9 81 chr20 6876340 6876451 -65277431 + FRAM SINE Alu 1 101 -75 2698 193 51 69 chr20 6877371 6877767 -65276115 - MER99 DNA DNA -1 827 425 2217 118 0 16 chr20 6877767 6878081 -65275801 + AluSx SINE Alu 1 309 -3 2698 193 51 69 chr20 6878081 6878367 -65275515 - MER99 DNA DNA -403 425 156 2055 129 0 0 chr20 6878367 6878669 -65275213 + AluSx SINE Alu 4 305 -7 2698 193 51 69 chr20 6878669 6878696 -65275186 - MER99 DNA DNA -672 156 130 2341 69 0 33 chr20 6879551 6879884 -65273998 + AluY SINE Alu 1 323 0 1120 115 32 0 chr20 6879884 6880041 -65273841 - U1 snRNA snRNA -3 162 1 998 185 31 70 chr20 6880420 6880647 -65273235 - MER20 DNA MER1_type -1 218 1 1350 50 106 0 chr20 6880954 6881164 -65272718 - AluSg/x SINE Alu 0 311 83 2293 76 28 0 chr20 6882049 6882338 -65271544 - AluSp SINE Alu -14 299 3 1832 244 101 7 chr20 6882428 6882874 -65271008 + LTR16C LTR ERVL 4 491 0 1751 163 3 29 chr20 6883545 6883858 -65270024 + AluJo SINE Alu 2 306 -6 233 322 35 0 chr20 6884010 6884097 -65269785 + LTR67 LTR ERVL 98 187 -370 3741 203 24 47 chr20 6884097 6885089 -65268793 - LTR5 LTR ERVK 0 969 1 322 284 164 0 chr20 6885279 6885395 -65268487 + LTR67 LTR ERVL 418 552 -5 614 220 69 86 chr20 6886183 6886380 -65267502 + L1MC5 LINE L1 7498 7690 -271 1760 154 0 7 chr20 6886380 6886653 -65267229 + AluJb SINE Alu 1 271 -41 614 220 69 86 chr20 6886653 6886746 -65267136 + L1MC5 LINE L1 7690 7783 -178 433 272 88 0 chr20 6886752 6886866 -65267016 + MER5C DNA MER1_type 1 124 -200 183 186 305 0 chr20 6886980 6887039 -65266843 + MER5C DNA MER1_type 248 324 0 342 0 0 0 chr20 6887047 6887085 -65266797 + (CA)n Simple_repeat Simple_repeat 1 38 0 389 223 41 16 chr20 6887085 6887206 -65266676 + L1MC5 LINE L1 7784 7907 -54 220 270 95 32 chr20 6887724 6887850 -65266032 - MIR3 SINE MIR -11 197 64 375 23 0 0 chr20 6888529 6888573 -65265309 + (TG)n Simple_repeat Simple_repeat 1 44 0 1486 154 0 16 chr20 6888573 6888826 -65265056 - AluJb SINE Alu -31 281 33 2179 109 3 10 chr20 6888830 6889133 -65264749 + AluSp SINE Alu 1 301 -12 452 171 0 0 chr20 6889168 6889238 -65264644 - Tigger5 DNA MER2_type -1 2322 2253 302 258 0 0 chr20 6889239 6889305 -65264577 + Tigger5 DNA MER2_type 2252 2317 -6 276 232 145 0 chr20 6889307 6889376 -65264506 - Tigger5 DNA MER2_type -2244 79 1 759 227 7 0 chr20 6889403 6889557 -65264325 - MIR SINE MIR -96 166 12 2739 105 11 6 chr20 6889863 6890225 -65263657 + THE1B LTR MaLR 1 364 0 310 236 14 0 chr20 6890238 6890310 -65263572 + MER116 DNA Mariner 3 75 -5 1567 193 81 122 chr20 6890550 6890930 -65262952 - LTR49 LTR ERV1 0 595 248 1672 200 0 7 chr20 6890930 6891240 -65262642 + AluJo SINE Alu 1 308 -4 1567 193 81 122 chr20 6891240 6891475 -65262407 - LTR49 LTR ERV1 -347 248 5 2375 102 0 6 chr20 6891958 6892272 -65261610 + AluSx SINE Alu 1 312 0 2219 111 3 3 chr20 6892344 6892650 -65261232 + AluSp SINE Alu 6 311 -2 283 215 133 68 chr20 6892669 6892867 -65261015 + MLT1F LTR MaLR 1 256 -293 1177 197 80 11 chr20 6893016 6893290 -65260592 - L1MD2 LINE L1 -2 6357 6065 880 249 0 10 chr20 6893364 6893557 -65260325 - AluJb SINE Alu -2 310 120 2533 208 91 77 chr20 6893570 6894339 -65259543 - L1MDa LINE L1 -2990 3550 2738 1513 167 15 23 chr20 6894339 6894651 -65259231 - AluJo SINE Alu 0 330 21 2533 208 91 77 chr20 6894651 6895158 -65258724 - L1MDa LINE L1 -3802 2738 2240 1996 207 76 41 chr20 6895171 6895543 -65258339 - MER21B LTR ERV1 -1 862 466 1941 124 48 3 chr20 6895543 6895833 -65258049 + AluSx SINE Alu 1 303 -9 1996 207 76 41 chr20 6895833 6895972 -65257910 - MER21B LTR ERV1 -397 466 333 2158 134 0 3 chr20 6896140 6896453 -65257429 - AluSx SINE Alu 0 312 1 258 301 62 62 chr20 6896469 6896645 -65257237 + HAL1 LINE L1 2309 2484 -23 1690 178 11 3 chr20 6896743 6897029 -65256853 + AluJo SINE Alu 1 288 -24 2059 134 3 0 chr20 6897330 6897620 -65256262 - AluSx SINE Alu -21 291 1 23 0 0 0 chr20 6898033 6898056 -65255826 + AT_rich Low_complexity Low_complexity 1 23 0 560 224 29 0 chr20 6898226 6898400 -65255482 + CT-rich Low_complexity Low_complexity 1 179 0 226 161 18 18 chr20 6898417 6898473 -65255409 + CT-rich Low_complexity Low_complexity 4 59 0 672 278 110 63 chr20 6898559 6899580 -65254302 - L1M4 LINE L1 -2018 4128 2934 3204 116 12 0 chr20 6899580 6900003 -65253879 - MSTA LTR MaLR 0 428 1 672 278 110 63 chr20 6900003 6900591 -65253291 - L1M4 LINE L1 -3212 2934 2375 6229 206 2 4 chr20 6900609 6901884 -65251998 + L1 LINE L1 3863 5135 -1011 772 226 66 67 chr20 6902401 6902755 -65251127 + HAL1 LINE L1 1112 1539 -968 336 282 0 21 chr20 6902784 6902880 -65251002 + MLT1F1 LTR MaLR 1 94 -466 1002 199 129 48 chr20 6902884 6902976 -65250906 + MLT1A2 LTR MaLR 1 84 -290 1986 153 0 3 chr20 6902976 6903283 -65250599 + AluSx SINE Alu 1 306 -6 1002 199 129 48 chr20 6903283 6903522 -65250360 + MLT1A2 LTR MaLR 84 359 -15 1436 191 83 81 chr20 6903539 6904006 -65249876 + MLT1F1 LTR MaLR 95 562 -5 1197 243 119 75 chr20 6904006 6904479 -65249403 + HAL1 LINE L1 1607 2123 -384 2875 150 26 24 chr20 6904479 6904945 -65248937 - MLT1C LTR MaLR 0 467 1 1197 243 119 75 chr20 6904945 6905176 -65248706 + HAL1 LINE L1 2123 2342 -165 1716 76 5 0 chr20 6905176 6905386 -65248496 + AluSg/x SINE Alu 81 291 -21 2190 206 32 63 chr20 6905388 6906153 -65247729 - L1MCb LINE L1 -4851 1194 571 1285 265 46 88 chr20 6906210 6906837 -65247045 - L1MCb LINE L1 -5444 601 1 821 60 30 15 chr20 6907273 6907406 -65246476 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 360 0 0 0 chr20 6907409 6907449 -65246433 + (CA)n Simple_repeat Simple_repeat 2 41 0 250 303 178 46 chr20 6908706 6908858 -65245024 - MIR SINE MIR -73 189 18 474 335 77 10 chr20 6910631 6910825 -65243057 - MIR SINE MIR -45 217 11 1884 142 14 3 chr20 6911195 6911490 -65242392 + AluSx SINE Alu 14 311 -1 1931 85 0 12 chr20 6911693 6911941 -65241941 - AluY SINE Alu -19 292 48 308 301 88 16 chr20 6912022 6912215 -65241667 - L1MB8 LINE L1 -279 5899 5693 1836 82 9 0 chr20 6912228 6912460 -65241422 - L1PA8 LINE L1 0 6172 5939 1269 270 99 13 chr20 6912515 6912908 -65240974 + LTR16B LTR ERVL 34 460 -4 31 0 0 0 chr20 6913020 6913051 -65240831 + AT_rich Low_complexity Low_complexity 1 31 0 537 215 25 0 chr20 6913051 6913172 -65240710 - L1ME3A LINE L1 -20 6150 6027 1503 191 109 56 chr20 6913197 6913654 -65240228 - MER66A LTR ERV1 0 478 97 1320 181 112 67 chr20 6913708 6914084 -65239798 - L1ME3A LINE L1 -157 6013 5621 917 169 6 19 chr20 6914091 6914251 -65239631 + FRAM SINE Alu 1 152 -24 868 210 64 78 chr20 6914308 6914627 -65239255 - LTR41 LTR ERVL 0 766 457 909 183 21 42 chr20 6914776 6914967 -65238915 - LTR41 LTR ERVL -586 187 1 2883 3 0 0 chr20 6915494 6915805 -65238077 + AluYa5 SINE Alu 1 311 0 189 159 0 0 chr20 6916219 6916263 -65237619 + A-rich Low_complexity Low_complexity 1 44 0 220 165 0 51 chr20 6916290 6916369 -65237513 + GA-rich Low_complexity Low_complexity 3 77 0 206 224 20 0 chr20 6916390 6916439 -65237443 + G-rich Low_complexity Low_complexity 4 53 0 4970 150 23 8 chr20 6918640 6919647 -65234235 + L1PA16 LINE L1 5128 6150 -16 303 329 29 22 chr20 6919680 6919817 -65234065 - L1M4c LINE L1 -3798 2584 2447 358 258 114 3 chr20 6920297 6920530 -65233352 - L1M4c LINE L1 -4653 1910 1536 769 325 133 25 chr20 6920560 6920755 -65233127 - L2 LINE L2 -1888 1426 1254 2371 93 0 10 chr20 6920755 6921065 -65232817 + AluSx SINE Alu 1 307 -5 769 325 133 25 chr20 6921065 6921163 -65232719 - L2 LINE L2 -2060 1254 1168 1544 206 62 37 chr20 6921163 6921595 -65232287 - LTR47B LTR ERVL 0 443 1 769 325 133 25 chr20 6921595 6921789 -65232093 - L2 LINE L2 -2146 1168 885 884 58 15 2 chr20 6921789 6921923 -65231959 + L1HS LINE L1 5990 6154 0 450 128 0 0 chr20 6922569 6922628 -65231254 + (GA)n Simple_repeat Simple_repeat 2 63 -16 387 0 0 0 chr20 6922628 6922671 -65231211 + (TG)n Simple_repeat Simple_repeat 1 43 0 450 128 0 0 chr20 6922671 6922689 -65231193 + (GA)n Simple_repeat Simple_repeat 62 79 0 622 190 165 6 chr20 6922745 6922903 -65230979 + MER54B LTR ERVL 1 183 -610 683 194 8 21 chr20 6923008 6923256 -65230626 + GA-rich Low_complexity Low_complexity 1 244 0 275 200 0 0 chr20 6923311 6923371 -65230511 - MLT1F1 LTR MaLR -8 559 500 704 342 39 24 chr20 6923375 6923787 -65230095 + L1MA9 LINE L1 177 594 -5719 9250 227 60 35 chr20 6924492 6925726 -65228156 + L1MA9 LINE L1 912 2114 -4268 2609 62 0 0 chr20 6925726 6926035 -65227847 + AluY SINE Alu 1 309 -2 9250 227 60 35 chr20 6926035 6926065 -65227817 + L1MA9 LINE L1 2114 2142 -4240 2073 138 49 3 chr20 6926065 6926435 -65227447 + L1MA5 LINE L1 5909 6295 -5 9250 227 60 35 chr20 6926435 6928275 -65225607 + L1MA9 LINE L1 2142 3968 -2414 186 43 0 0 chr20 6928275 6928298 -65225584 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9250 227 60 35 chr20 6928298 6929276 -65224606 + L1MA9 LINE L1 3968 4920 -1462 1083 164 21 0 chr20 6929280 6929469 -65224413 + MSTB LTR MaLR 5 197 -229 210 299 51 56 chr20 6932717 6932914 -65220968 + L3b LINE CR1 1145 1340 -243 1210 136 45 45 chr20 6933404 6933647 -65220235 + MSTB LTR MaLR 184 426 0 5175 175 17 15 chr20 6933647 6934019 -65219863 + L1MA9 LINE L1 4916 5286 -1262 2388 88 0 23 chr20 6934019 6934325 -65219557 + AluSq SINE Alu 1 299 -14 5175 175 17 15 chr20 6934325 6935576 -65218306 + L1MA9 LINE L1 5286 6541 -7 456 231 6 58 chr20 6935785 6935941 -65217941 + HAL1 LINE L1 2009 2156 -351 2129 206 34 28 chr20 6935963 6936462 -65217420 - MLT1F1 LTR MaLR -65 502 1 352 326 38 0 chr20 6936472 6936604 -65217278 + L1ME LINE L1 4232 4368 -1778 784 269 101 36 chr20 6936667 6937584 -65216298 + L1ME LINE L1 4616 5585 -577 297 381 42 0 chr20 6937696 6937864 -65216018 - L2 LINE L2 -923 2391 2217 1994 123 3 36 chr20 6938119 6938427 -65215455 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 6938856 6938877 -65215005 + AT_rich Low_complexity Low_complexity 1 21 0 25466 28 3 0 chr20 6939228 6943052 -65210830 - L1PA2 LINE L1 0 6155 2323 247 287 115 8 chr20 6943307 6943429 -65210453 + MER46C DNA MER2_type 142 276 -62 255 298 154 0 chr20 6943612 6943716 -65210166 - L2 LINE L2 -222 3050 2931 549 256 186 6 chr20 6943831 6943987 -65209895 - MER5A DNA MER1_type 0 189 6 285 164 18 0 chr20 6943999 6944054 -65209828 - MER3 DNA MER1_type 0 209 154 723 117 0 42 chr20 6944085 6944205 -65209677 + AluSg/x SINE Alu 189 303 -7 545 215 0 0 chr20 6944241 6944348 -65209534 - MER3 DNA MER1_type -93 116 10 1624 192 165 34 chr20 6944479 6945008 -65208874 + MLT1F1 LTR MaLR 1 542 0 697 242 81 10 chr20 6945008 6945206 -65208676 - MIR SINE MIR -43 219 8 352 176 59 209 chr20 6945298 6945366 -65208516 + MER5B DNA MER1_type 17 94 -84 1518 38 0 5 chr20 6945366 6945551 -65208331 + AluY SINE Alu 123 306 -5 352 176 59 209 chr20 6945551 6945669 -65208213 + MER5B DNA MER1_type 94 175 -3 212 281 31 16 chr20 6945718 6945782 -65208100 + MER5A DNA MER1_type 124 188 -1 902 209 11 0 chr20 6946646 6946833 -65207049 - MER5A DNA MER1_type 0 189 1 709 285 23 8 chr20 6946852 6947108 -65206774 + MIR SINE MIR 1 260 -2 2987 165 26 66 chr20 6947270 6948121 -65205761 + LTR1 LTR ERV1 9 785 0 972 315 54 10 chr20 6949151 6949557 -65204325 + LTR16C LTR ERVL 68 491 0 561 300 76 38 chr20 6950030 6950373 -65203509 - MLT1I LTR MaLR -1 408 53 180 0 0 0 chr20 6950577 6950597 -65203285 + (A)n Simple_repeat Simple_repeat 1 20 0 805 279 87 14 chr20 6951251 6951606 -65202276 - MLT1L LTR MaLR -221 394 14 279 285 157 17 chr20 6951659 6951831 -65202051 - LTR16A1 LTR ERVL -1 456 261 1937 186 53 3 chr20 6952025 6952402 -65201480 + MER54B LTR ERVL 103 498 -295 225 83 0 0 chr20 6952404 6952440 -65201442 + (CA)n Simple_repeat Simple_repeat 2 37 0 1033 269 44 16 chr20 6952991 6953419 -65200463 - L1MC3 LINE L1 -1639 6382 5943 258 272 126 49 chr20 6953479 6953949 -65199933 - L1MC3 LINE L1 -1567 4815 4310 6530 21 1 0 chr20 6954001 6954792 -65199090 - L1PA4 LINE L1 -3 6152 5361 1072 21 28 0 chr20 6954795 6954937 -65198945 + L1PA4 LINE L1 5213 5358 -788 603 270 150 46 chr20 6955012 6955638 -65198244 - HAL1 LINE L1 -1816 691 1 450 268 95 30 chr20 6955703 6955986 -65197896 - L1MC3 LINE L1 -3917 2467 2169 1607 102 9 4 chr20 6955991 6956762 -65197120 + L1PB1 LINE L1 5285 6151 0 2130 104 0 46 chr20 6956892 6957218 -65196664 - AluY SINE Alu 0 311 1 203 0 0 36 chr20 6957297 6957325 -65196557 + (TTA)n Simple_repeat Simple_repeat 2 28 0 369 334 135 32 chr20 6957349 6957690 -65196192 - HAL1b LINE L1 -646 1765 327 1675 200 3 22 chr20 6957707 6958022 -65195860 - AluJb SINE Alu -1 311 3 408 329 109 42 chr20 6958083 6958631 -65195251 - L1MC3 LINE L1 -4864 1508 924 1080 128 0 16 chr20 6960940 6961128 -65192754 + MER53 DNA DNA 4 188 -1 877 209 6 0 chr20 6961932 6962109 -65191773 + MER5B DNA MER1_type 1 178 0 197 255 39 20 chr20 6962367 6962418 -65191464 - L2 LINE L2 -254 3059 3008 842 239 0 16 chr20 6962445 6962629 -65191253 + MER5A DNA MER1_type 1 181 -8 1722 169 10 22 chr20 6962909 6963223 -65190659 - AluSx SINE Alu 0 312 3 642 276 24 84 chr20 6963849 6964228 -65189654 + MLT1G3 LTR MaLR 9 300 -230 201 200 0 40 chr20 6964442 6964492 -65189390 + GA-rich Low_complexity Low_complexity 4 51 0 257 82 27 82 chr20 6965610 6965720 -65188162 + (CCCCCA)n Simple_repeat Simple_repeat 4 107 0 217 239 45 0 chr20 6965772 6965860 -65188022 + (CAAA)n Simple_repeat Simple_repeat 2 93 0 204 200 18 18 chr20 6965897 6965952 -65187930 + (CCAA)n Simple_repeat Simple_repeat 2 56 0 747 92 0 0 chr20 6965952 6966061 -65187821 + (TTCC)n Simple_repeat Simple_repeat 2 110 0 1281 160 5 0 chr20 6966061 6966267 -65187615 - AluJo SINE Alu -38 274 68 267 162 73 29 chr20 6966549 6966617 -65187265 - MLT1H LTR MaLR -25 524 454 1348 231 175 19 chr20 6966669 6967155 -65186727 + MLT1G1 LTR MaLR 22 583 -12 242 259 102 37 chr20 6967355 6967463 -65186419 - MLT1G1 LTR MaLR -465 130 16 353 326 0 0 chr20 6967479 6967571 -65186311 + L2 LINE L2 3185 3276 -37 298 329 134 51 chr20 6967633 6967925 -65185957 + L2 LINE L2 2933 3248 -24 414 246 22 43 chr20 6968178 6968316 -65185566 + MIR SINE MIR 127 261 -1 1839 163 0 11 chr20 6968676 6968958 -65184924 + AluJo SINE Alu 12 290 -22 1100 167 28 32 chr20 6969931 6970147 -65183735 + MER20 DNA MER1_type 5 219 0 1904 151 17 3 chr20 6972215 6972506 -65181376 - AluJb SINE Alu -15 297 3 798 274 134 8 chr20 6972653 6973025 -65180857 + LTR16C LTR ERVL 73 491 0 292 391 75 11 chr20 6973053 6973319 -65180563 + L2 LINE L2 2470 2752 -562 682 99 57 7 chr20 6973452 6973593 -65180289 + CT-rich Low_complexity Low_complexity 4 151 0 4507 138 33 14 chr20 6973593 6974420 -65179462 - L1MA8 LINE L1 -172 6119 5278 25 0 0 0 chr20 6975093 6975118 -65178764 + AT_rich Low_complexity Low_complexity 1 25 0 603 272 61 10 chr20 6976230 6976444 -65177438 - MIR SINE MIR -2 260 40 821 214 0 18 chr20 6976676 6976844 -65177038 - FRAM SINE Alu -14 162 1 5301 57 6 6 chr20 6976844 6977524 -65176358 - L1PA7 LINE L1 0 6154 5475 839 142 0 0 chr20 6977541 6977661 -65176221 - FLAM_C SINE Alu -13 120 1 928 216 22 0 chr20 6978150 6978331 -65175551 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6978602 6978952 -65174930 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6979004 6979202 -65174680 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6979626 6979666 -65174216 + (CA)n Simple_repeat Simple_repeat 2 41 0 2404 165 14 58 chr20 6979709 6980046 -65173836 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6980046 6980354 -65173528 - AluSg SINE Alu -1 309 1 2404 165 14 58 chr20 6980354 6980570 -65173312 - L1MCa LINE L1 -4173 2265 2041 2110 142 31 36 chr20 6980607 6980924 -65172958 + Tigger2 DNA MER2_type 2334 2650 -68 2179 112 7 0 chr20 6980924 6981218 -65172664 + AluSx SINE Alu 1 296 -16 2110 142 31 36 chr20 6981218 6981287 -65172595 + Tigger2 DNA MER2_type 2650 2718 0 1552 127 43 49 chr20 6981288 6981911 -65171971 - L1MCa LINE L1 -4383 2043 1328 2474 126 48 10 chr20 6981919 6982331 -65171551 + MSTA LTR MaLR 1 428 0 2315 215 13 13 chr20 6982396 6982930 -65170952 - MER74A LTR ERVL -24 534 1 490 248 28 0 chr20 6983765 6983874 -65170008 + MIR SINE MIR 80 191 -71 189 0 0 0 chr20 6984016 6984037 -65169845 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1233 258 122 0 chr20 6984528 6984947 -65168935 + L1ME2 LINE L1 5686 6155 -9 425 91 0 0 chr20 6984990 6985056 -65168826 - L1P5 LINE L1 -631 5525 5460 1066 186 0 10 chr20 6985056 6985258 -65168624 + L1PA16 LINE L1 5964 6165 -1 219 36 0 0 chr20 6985265 6985293 -65168589 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1065 150 20 36 chr20 6986645 6986892 -65166990 + L1MA4 LINE L1 6055 6297 -3 894 83 35 0 chr20 6986898 6987043 -65166839 - L1P5 LINE L1 -679 5477 5328 629 191 57 0 chr20 6987227 6987384 -65166498 - L1 LINE L1 -795 5351 5186 3703 130 30 0 chr20 6987384 6987990 -65165892 + L1PB4 LINE L1 5532 6156 0 1087 206 14 106 chr20 6988280 6988713 -65165169 - LTR16A1 LTR ERVL -10 447 55 292 185 200 0 chr20 6989112 6989177 -65164705 + L2 LINE L2 3195 3272 0 350 46 62 0 chr20 6991068 6991133 -65162749 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 252 345 74 20 chr20 6991737 6991885 -65161997 - L3b LINE CR1 -205 1378 1223 368 317 8 24 chr20 6992277 6992400 -65161482 + MIR3 SINE MIR 75 195 -13 259 382 53 0 chr20 6992554 6992685 -65161197 + MIR3 SINE MIR 30 167 -41 1680 189 19 73 chr20 6993104 6993517 -65160365 + MSTD LTR MaLR 6 396 0 827 229 17 6 chr20 6993763 6993938 -65159944 - MER45A DNA AcHobo -1 177 1 2819 7 0 0 chr20 6994076 6994382 -65159500 - AluYa5 SINE Alu -5 306 1 1738 154 89 31 chr20 6994718 6995243 -65158639 + MLT2A2 LTR ERVL 1 554 0 2332 251 93 15 chr20 6996331 6997183 -65156699 + L1MC4 LINE L1 7125 8042 0 442 146 101 0 chr20 6998933 6999022 -65154860 - MLT2C2 LTR ERVL -364 100 3 492 99 0 0 chr20 6999067 6999138 -65154744 + (TA)n Simple_repeat Simple_repeat 2 72 0 621 111 0 0 chr20 6999173 6999263 -65154619 - MLT2C2 LTR ERVL -374 90 1 489 336 24 45 chr20 6999748 7000037 -65153845 - L2 LINE L2 -25 3288 3006 282 330 39 39 chr20 7000267 7000449 -65153433 - L3b LINE CR1 -131 1452 1271 1493 122 9 5 chr20 7000460 7000674 -65153208 + AluSp SINE Alu 86 300 -13 22 0 0 0 chr20 7001606 7001628 -65152254 + AT_rich Low_complexity Low_complexity 1 22 0 1077 151 26 0 chr20 7001758 7001950 -65151932 + L1PA13 LINE L1 5946 6142 -21 2071 136 25 14 chr20 7002397 7002757 -65151125 + MSTB LTR MaLR 6 369 -57 576 293 61 0 chr20 7002967 7003148 -65150734 + MIR SINE MIR 45 236 -26 185 26 0 0 chr20 7003365 7003592 -65150290 + AT_rich Low_complexity Low_complexity 1 227 0 283 279 79 21 chr20 7004131 7004271 -65149611 + MLT1J2 LTR MaLR 17 164 -286 294 157 57 14 chr20 7004437 7004507 -65149375 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr20 7005879 7005901 -65147981 + (T)n Simple_repeat Simple_repeat 1 22 0 22 56 0 0 chr20 7005979 7006015 -65147867 + AT_rich Low_complexity Low_complexity 1 36 0 543 286 75 36 chr20 7007090 7007342 -65146540 - MER115 DNA AcHobo -72 621 360 2364 195 33 0 chr20 7007489 7007941 -65145941 - MLT1C LTR MaLR 0 467 1 437 303 8 0 chr20 7007956 7008078 -65145804 - MER115 DNA AcHobo -546 147 25 243 0 0 0 chr20 7008900 7008927 -65144955 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1786 145 10 46 chr20 7011236 7011539 -65142343 - AluJo SINE Alu -16 296 5 259 162 0 19 chr20 7012195 7012349 -65141533 + AluJo SINE Alu 46 281 -21 24 0 0 0 chr20 7012484 7012508 -65141374 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr20 7012688 7012729 -65141153 + AT_rich Low_complexity Low_complexity 1 41 0 1693 139 78 12 chr20 7012729 7013060 -65140822 - L1MA9 LINE L1 -1 6311 5959 267 225 0 0 chr20 7013262 7013333 -65140549 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 194 193 35 35 chr20 7013890 7013947 -65139935 - MER5A DNA MER1_type -120 69 13 250 294 143 0 chr20 7013966 7014078 -65139804 + MIR SINE MIR 34 159 -62 428 189 0 0 chr20 7014223 7014313 -65139569 + L1MA8 LINE L1 6197 6286 -5 24 0 0 0 chr20 7015463 7015487 -65138395 + AT_rich Low_complexity Low_complexity 1 24 0 332 304 108 18 chr20 7015555 7016089 -65137793 + L1MDa LINE L1 1268 1948 -4773 2241 100 0 13 chr20 7016089 7016388 -65137494 - AluSx SINE Alu -17 295 1 332 304 108 18 chr20 7016388 7016568 -65137314 + L1MDa LINE L1 1948 2110 -4611 4415 178 57 6 chr20 7016654 7017474 -65136408 - MER21B LTR ERV1 -1 862 1 351 261 146 12 chr20 7017625 7017790 -65136092 - L2 LINE L2 -1814 1500 1314 2177 113 54 41 chr20 7017817 7018208 -65135674 + MER57A LTR ERV1 8 403 0 264 331 70 86 chr20 7018884 7019141 -65134741 + L2 LINE L2 3018 3270 -2 1149 190 71 6 chr20 7019272 7019625 -65134257 - Charlie5 DNA MER1_type 0 2620 2245 401 153 24 0 chr20 7019647 7019732 -65134150 - Charlie5 DNA MER1_type -2495 117 31 6071 184 27 8 chr20 7020447 7022539 -65131343 + L1MB1 LINE L1 4001 6132 -36 774 190 0 0 chr20 7022636 7022824 -65131058 - FLAM_C SINE Alu 0 189 2 664 214 38 25 chr20 7022824 7023042 -65130840 - L1MC/D LINE L1 -534 5636 5429 227 91 0 0 chr20 7023148 7023181 -65130701 + L1 LINE L1 4913 4945 -1201 371 59 0 0 chr20 7023202 7023253 -65130629 + MADE1 DNA Mariner 29 79 -1 943 288 47 23 chr20 7024558 7025036 -65128846 - MLT1G3 LTR MaLR 0 595 21 1057 220 34 11 chr20 7025260 7025524 -65128358 - MLT1H1 LTR MaLR 0 555 286 642 239 48 6 chr20 7025591 7025758 -65128124 - MLT1H1 LTR MaLR -419 176 3 195 42 0 0 chr20 7026081 7026105 -65127777 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 379 276 43 9 chr20 7026110 7026226 -65127656 - L2 LINE L2 -1 3312 3193 846 208 6 6 chr20 7026985 7027158 -65126724 - L1PB3 LINE L1 0 6154 5982 771 268 105 28 chr20 7027271 7027700 -65126182 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 7028766 7028981 -65124901 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 7029081 7029261 -65124621 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 7029609 7029872 -65124010 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 7030083 7030164 -65123718 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 7030133 7030798 -65123084 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 7032125 7032171 -65121711 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 347 70 19 chr20 7032224 7032495 -65121387 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 7032577 7032633 -65121249 + MIR3 SINE MIR 151 208 0 515 291 65 4 chr20 7033388 7033618 -65120264 + LTR16A LTR ERVL 18 261 -189 386 268 46 26 chr20 7033860 7034013 -65119869 - MIR SINE MIR 0 262 107 489 32 0 0 chr20 7034407 7034469 -65119413 - L1PA16 LINE L1 -314 5852 5791 2348 128 16 13 chr20 7035752 7036134 -65117748 - L1PA15 LINE L1 0 6165 5783 539 253 175 62 chr20 7036230 7036602 -65117280 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 7037986 7038029 -65115853 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 7039025 7039048 -65114834 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 7039327 7039362 -65114520 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 7039612 7039681 -65114201 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 7040293 7040600 -65113282 - MLT1H LTR MaLR -226 323 9 3547 142 32 18 chr20 7041258 7041943 -65111939 - L1MA7 LINE L1 -51 6240 5546 1604 184 7 39 chr20 7042264 7042574 -65111308 - AluJo SINE Alu -12 300 1 1869 299 116 8 chr20 7043070 7043929 -65109953 - L2 LINE L2 -138 3175 2224 6622 202 18 4 chr20 7043948 7045746 -65108136 + L1PA15-16 LINE L1 12 1383 -5466 17941 59 11 1 chr20 7045846 7048387 -65105495 - L1P4 LINE L1 -699 5464 2898 872 216 0 6 chr20 7048616 7048792 -65105090 - L1PB3 LINE L1 0 6154 5980 771 268 105 28 chr20 7048905 7049334 -65104548 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 7050400 7050615 -65103267 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 7050715 7050895 -65102987 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 7051243 7051506 -65102376 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 7051717 7051798 -65102084 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 7051767 7052432 -65101450 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 7053757 7053803 -65100079 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 347 70 19 chr20 7053856 7054127 -65099755 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 7054209 7054265 -65099617 + MIR3 SINE MIR 151 208 0 515 291 65 4 chr20 7055019 7055249 -65098633 + LTR16A LTR ERVL 18 261 -189 386 268 46 26 chr20 7055491 7055644 -65098238 - MIR SINE MIR 0 262 107 465 48 0 0 chr20 7056038 7056100 -65097782 - L1PA16 LINE L1 -314 5852 5791 539 253 175 62 chr20 7056205 7056577 -65097305 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 7057961 7058004 -65095878 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 7059000 7059023 -65094859 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 7059302 7059337 -65094545 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 7059587 7059656 -65094226 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 7060268 7060575 -65093307 - MLT1H LTR MaLR -226 323 9 1050 128 53 11 chr20 7061465 7061673 -65092209 - Tigger2 DNA MER2_type -199 2519 8 2415 127 6 54 chr20 7061682 7061898 -65091984 + L1MCa LINE L1 2041 2266 -4160 2196 117 7 3 chr20 7061898 7062206 -65091676 + AluSg SINE Alu 1 309 -1 2415 127 6 54 chr20 7062206 7062544 -65091338 + L1MCa LINE L1 2266 2578 -3848 273 75 0 0 chr20 7062587 7062627 -65091255 + (TG)n Simple_repeat Simple_repeat 2 41 0 1054 172 25 0 chr20 7063051 7063249 -65090633 - MER3 DNA MER1_type 0 209 7 888 260 114 6 chr20 7063301 7063651 -65090231 - LTR33A LTR ERVL -75 448 61 928 216 22 0 chr20 7063922 7064103 -65089779 + MER5A DNA MER1_type 1 185 -4 1994 123 3 36 chr20 7064592 7064900 -65088982 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 7065329 7065350 -65088532 + AT_rich Low_complexity Low_complexity 1 21 0 11070 41 6 4 chr20 7065701 7069523 -65084359 - L1PA2 LINE L1 0 6155 2323 247 287 115 8 chr20 7069778 7069900 -65083982 + MER46C DNA MER2_type 142 276 -62 224 261 43 0 chr20 7070083 7070152 -65083730 - L2 LINE L2 -222 3050 2979 3352 91 11 0 chr20 7070427 7071051 -65082831 - L1PB1 LINE L1 -143 6008 5285 448 266 95 31 chr20 7071056 7071340 -65082542 + L1M4c LINE L1 2169 2467 -3917 402 278 158 53 chr20 7071405 7072030 -65081852 + HAL1 LINE L1 1 691 -1816 1072 21 28 0 chr20 7072105 7072247 -65081635 - L1PA4 LINE L1 -788 5358 5213 6630 30 0 1 chr20 7072250 7073040 -65080842 + L1PA4 LINE L1 5361 6149 -6 2196 130 0 0 chr20 7174632 7174940 -64978942 + AluSx SINE Alu 1 308 -4 500 152 10 0 chr20 7174940 7175039 -64978843 + GA-rich Low_complexity Low_complexity 1 100 0 1774 231 25 35 chr20 7175851 7176198 -64977684 - L1M4 LINE L1 -492 5686 5337 1862 89 0 63 chr20 7176198 7176469 -64977413 - AluSq SINE Alu -16 297 44 1774 231 25 35 chr20 7176469 7176866 -64977016 - L1M4 LINE L1 -841 5337 4934 399 313 0 17 chr20 7177059 7177238 -64976644 + (TA)n Simple_repeat Simple_repeat 2 177 0 180 0 0 0 chr20 7178221 7178241 -64975641 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 258 32 0 0 chr20 7178610 7178641 -64975241 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 949 229 17 21 chr20 7178750 7178986 -64974896 - MSTB LTR MaLR -191 235 1 1062 323 25 12 chr20 7179059 7179510 -64974372 - L2 LINE L2 -225 3088 2630 3006 207 71 36 chr20 7180116 7181361 -64972521 - L1MD2 LINE L1 -312 6047 4768 531 215 0 0 chr20 7181367 7181460 -64972422 + AluJ/FLAM SINE Alu 1 93 -219 2159 136 7 0 chr20 7182142 7182452 -64971430 + MER1B DNA MER1_type 28 339 0 180 125 0 0 chr20 7182883 7182915 -64970967 + (TG)n Simple_repeat Simple_repeat 2 33 0 2283 113 3 0 chr20 7184072 7184374 -64969508 - AluSq SINE Alu -8 305 3 2015 259 68 8 chr20 7184377 7184980 -64968902 - L1ME3A LINE L1 -36 6134 5496 229 266 59 65 chr20 7185080 7185249 -64968633 + L2 LINE L2 3143 3310 -3 216 292 45 22 chr20 7185811 7185900 -64967982 - MIR SINE MIR -55 207 117 2031 132 58 21 chr20 7185926 7186251 -64967631 + MER1B DNA MER1_type 1 337 0 203 146 24 0 chr20 7186323 7186364 -64967518 + GA-rich Low_complexity Low_complexity 1 42 0 207 300 71 14 chr20 7186543 7186613 -64967269 - MIR SINE MIR -97 111 38 23 62 0 0 chr20 7187488 7187520 -64966362 + AT_rich Low_complexity Low_complexity 1 32 0 368 282 64 68 chr20 7188685 7188951 -64964931 + LTR33 LTR ERVL 24 288 -233 423 259 167 17 chr20 7189751 7189925 -64963957 - MIR SINE MIR -5 257 58 6642 44 19 6 chr20 7190355 7191143 -64962739 + L1PA7 LINE L1 5353 6150 -4 209 57 29 0 chr20 7192560 7192595 -64961287 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 342 0 0 0 chr20 7193032 7193070 -64960812 + (TG)n Simple_repeat Simple_repeat 2 39 0 827 269 31 18 chr20 7194570 7194793 -64959089 + MIR SINE MIR 1 226 -36 212 175 0 0 chr20 7195077 7195117 -64958765 + T-rich Low_complexity Low_complexity 4 43 0 1641 183 20 0 chr20 7196711 7197012 -64956870 - AluSx SINE Alu -5 307 1 383 305 90 75 chr20 7197589 7197910 -64955972 + L3 LINE CR1 1178 1503 -74 239 322 52 26 chr20 7198361 7198476 -64955406 + L3 LINE CR1 1349 1466 -111 364 196 0 0 chr20 7198667 7198723 -64955159 + Alu SINE Alu 1 56 -246 820 123 31 15 chr20 7198723 7198853 -64955029 + AluJo/FRAM SINE Alu 167 298 -14 205 315 210 28 chr20 7199599 7199742 -64954140 - MIR SINE MIR -88 174 6 396 72 43 0 chr20 7201070 7201139 -64952743 + CT-rich Low_complexity Low_complexity 1 72 0 1876 156 0 20 chr20 7201244 7201546 -64952336 - AluJb SINE Alu -16 296 1 6842 68 0 0 chr20 7201591 7202444 -64951438 - L1PA6 LINE L1 0 6154 5302 1998 97 0 0 chr20 7202442 7202731 -64951151 + L1PA6 LINE L1 5014 5302 -844 * 362 324 200 0 chr20 7203417 7203562 -64950320 + MER5A DNA MER1_type 16 189 0 363 235 25 0 chr20 7204848 7204929 -64948953 + MER5A DNA MER1_type 106 188 -1 798 265 127 4 chr20 7205898 7206158 -64947724 - MLT1G1 LTR MaLR -19 576 285 668 231 27 41 chr20 7206158 7206305 -64947577 - AluJo SINE Alu -57 255 111 1172 241 44 0 chr20 7206305 7206575 -64947307 - MLT1G1 LTR MaLR -312 283 2 610 309 39 5 chr20 7206741 7206945 -64946937 - MIR SINE MIR -18 244 34 240 161 0 0 chr20 7206994 7207056 -64946826 + A-rich Low_complexity Low_complexity 1 62 0 243 239 0 0 chr20 7207302 7207369 -64946513 + (TA)n Simple_repeat Simple_repeat 2 68 0 540 167 12 0 chr20 7207395 7207479 -64946403 - AluJ/FLAM SINE Alu -222 90 6 2224 102 3 0 chr20 7207602 7207896 -64945986 - AluSx SINE Alu -17 295 1 192 231 0 77 chr20 7208095 7208147 -64945735 - L2 LINE L2 0 3272 3225 224 332 169 31 chr20 7209696 7210151 -64943731 - L2 LINE L2 -2331 983 466 638 344 57 0 chr20 7210424 7210671 -64943211 + MIR SINE MIR 1 261 -1 21 36 0 0 chr20 7210938 7210966 -64942916 + AT_rich Low_complexity Low_complexity 1 28 0 325 296 44 48 chr20 7211244 7211538 -64942344 + HAL1b LINE L1 178 470 -878 382 292 24 56 chr20 7211803 7211877 -64942005 + HAL1b LINE L1 670 745 -603 1903 140 9 22 chr20 7211877 7212192 -64941690 + AluJb SINE Alu 1 311 -1 382 292 24 56 chr20 7212192 7212367 -64941515 + HAL1b LINE L1 745 911 -437 267 303 26 0 chr20 7212393 7212469 -64941413 - L2 LINE L2 0 3313 3236 935 227 15 0 chr20 7212469 7212667 -64941215 + MER6B DNA MER2_type 3 203 -7 278 254 92 28 chr20 7213232 7213374 -64940508 + L1MC/D LINE L1 5278 5428 -2380 2403 73 3 3 chr20 7213386 7213689 -64940193 + AluY SINE Alu 1 303 -8 249 258 150 72 chr20 7213824 7213991 -64939891 + L1MC/D LINE L1 5602 5781 -2027 408 275 63 28 chr20 7214128 7214270 -64939612 - MIR SINE MIR -108 154 8 339 309 114 30 chr20 7214433 7214747 -64939135 - LTR33 LTR ERVL -11 510 119 2000 214 189 6 chr20 7214753 7215282 -64938600 - MLT1E1 LTR MaLR 0 654 29 216 0 0 0 chr20 7215749 7215773 -64938109 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1772 30 0 0 chr20 7216857 7217054 -64936828 - L1PA5 LINE L1 0 6154 5958 348 264 56 32 chr20 7217539 7217664 -64936218 + MER94 DNA DNA 7 134 0 669 275 48 24 chr20 7219008 7219259 -64934623 - MIR SINE MIR 0 262 6 359 327 44 13 chr20 7219306 7219465 -64934417 + L1MC2 LINE L1 5483 5646 -475 275 205 60 24 chr20 7219519 7219602 -64934280 + L1MC2 LINE L1 5746 5831 -1977 1759 143 22 35 chr20 7219688 7220002 -64933880 + L1MC2 LINE L1 6026 6335 -9 213 94 0 0 chr20 7220637 7220669 -64933213 + (CAAT)n Simple_repeat Simple_repeat 3 34 0 187 171 29 0 chr20 7222226 7222261 -64931621 - MER5A DNA MER1_type -118 71 36 886 177 27 11 chr20 7222601 7222787 -64931095 + MER5A DNA MER1_type 1 189 0 459 282 16 0 chr20 7222983 7223107 -64930775 + MER94 DNA DNA 1 126 -8 680 131 16 8 chr20 7223420 7223542 -64930340 + MER65A LTR ERV1 323 445 0 1810 177 7 3 chr20 7224635 7224929 -64928953 + AluJb SINE Alu 1 295 -17 2498 171 29 17 chr20 7225263 7225741 -64928141 + L1PA15 LINE L1 5678 6161 -4 29 28 0 0 chr20 7226135 7226171 -64927711 + AT_rich Low_complexity Low_complexity 1 36 0 707 235 112 32 chr20 7226171 7226675 -64927207 - MLT1G1 LTR MaLR 0 585 5 4246 119 3 0 chr20 7226771 7227402 -64926480 + MER41B LTR ERV1 3 635 0 2045 125 30 0 chr20 7227518 7227814 -64926068 - AluSx SINE Alu -7 305 1 306 255 265 51 chr20 7228466 7228618 -64925264 - L2 LINE L2 -540 2774 2656 2148 122 10 0 chr20 7228618 7228914 -64924968 + AluSx SINE Alu 1 299 -13 306 255 265 51 chr20 7228914 7228957 -64924925 - L2 LINE L2 -658 2656 2537 246 236 396 0 chr20 7229093 7229199 -64924683 - MER5A DNA MER1_type -1 188 41 253 254 39 54 chr20 7230155 7230285 -64923597 - MLT1L LTR MaLR -445 170 43 515 292 103 5 chr20 7230536 7230721 -64923161 - L2 LINE L2 -535 2779 2577 743 239 114 30 chr20 7230723 7231049 -64922833 + MLT1F1 LTR MaLR 1 365 -202 384 295 40 46 chr20 7231055 7231141 -64922741 - L2 LINE L2 -1002 2312 2227 1399 249 0 10 chr20 7231141 7231454 -64922428 + AluJo SINE Alu 1 310 -2 384 295 40 46 chr20 7231454 7231540 -64922342 - L2 LINE L2 -1087 2227 2141 185 0 0 39 chr20 7231541 7231567 -64922315 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 243 79 0 0 chr20 7233046 7233084 -64920798 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 728 324 122 17 chr20 7234023 7234539 -64919343 + L2 LINE L2 2754 3311 -2 821 237 49 5 chr20 7235203 7235427 -64918455 + L1ME1 LINE L1 5928 6161 -5 2112 92 4 0 chr20 7235446 7235719 -64918163 + AluSp SINE Alu 37 310 -3 550 255 7 7 chr20 7237963 7238108 -64915774 + MER117 DNA MER1_type 1 145 -52 332 178 148 10 chr20 7239020 7239121 -64914761 - MLT1F1 LTR MaLR -17 550 436 262 306 0 20 chr20 7239282 7239380 -64914502 - MLT1H LTR MaLR -362 187 92 231 267 0 0 chr20 7239907 7239952 -64913930 - MIR SINE MIR -131 77 33 244 308 17 8 chr20 7240148 7240268 -64913614 + L1M4b LINE L1 92 212 -6647 373 336 112 20 chr20 7240526 7240821 -64913061 + L1M4b LINE L1 862 1183 -5672 1779 247 56 79 chr20 7240893 7241279 -64912603 + L1M4b LINE L1 1190 1583 -5376 2061 119 58 0 chr20 7241279 7241574 -64912308 + AluSx SINE Alu 1 312 0 1779 247 56 79 chr20 7241574 7242416 -64911466 + L1M4b LINE L1 1583 2393 -4566 249 196 0 0 chr20 7242607 7242663 -64911219 + (TG)n Simple_repeat Simple_repeat 2 57 0 367 163 12 25 chr20 7242815 7242895 -64910987 + L1M4 LINE L1 4561 4639 -1507 931 266 177 2 chr20 7243835 7244248 -64909634 - LTR33A LTR ERVL -10 513 29 779 234 8 98 chr20 7245017 7245282 -64908600 - MIR SINE MIR -21 241 1 767 256 79 4 chr20 7245292 7245519 -64908363 - MLT1G LTR MaLR -335 255 12 297 0 0 0 chr20 7245997 7246030 -64907852 + (TG)n Simple_repeat Simple_repeat 1 33 0 1802 129 4 0 chr20 7247249 7247505 -64906377 - AluSx SINE Alu -12 300 44 2401 89 0 3 chr20 7248980 7249284 -64904598 + AluSq SINE Alu 1 303 -10 530 313 30 5 chr20 7250601 7250799 -64903083 + MIR SINE MIR 22 224 -38 515 342 77 62 chr20 7250997 7251057 -64902825 - L2 LINE L2 0 3272 3214 2080 141 0 7 chr20 7251057 7251361 -64902521 - AluSx SINE Alu -10 302 1 515 342 77 62 chr20 7251361 7251794 -64902088 - L2 LINE L2 -58 3214 2794 4529 172 21 11 chr20 7252081 7252652 -64901230 - L1MB3 LINE L1 -1 6182 5618 2445 37 0 7 chr20 7252652 7252947 -64900935 - AluY SINE Alu -18 293 1 4529 172 21 11 chr20 7252947 7253597 -64900285 - L1MB3 LINE L1 -565 5618 4944 1443 224 78 28 chr20 7253606 7254079 -64899803 + L1MB8 LINE L1 5680 6176 -2 249 33 0 0 chr20 7254161 7254191 -64899691 + (TG)n Simple_repeat Simple_repeat 1 30 0 546 278 74 0 chr20 7255958 7256134 -64897748 - MER5A DNA MER1_type 0 189 1 249 253 35 0 chr20 7256178 7256265 -64897617 - L1ME LINE L1 -316 5805 5716 460 310 150 9 chr20 7256293 7256506 -64897376 - MIR SINE MIR 0 262 20 653 214 26 0 chr20 7256642 7256796 -64897086 + MER45A DNA AcHobo 21 178 0 22 0 0 0 chr20 7257159 7257181 -64896701 + AT_rich Low_complexity Low_complexity 1 22 0 1303 124 5 25 chr20 7257188 7257424 -64896458 - AluSg/x SINE Alu 0 312 96 1631 138 112 35 chr20 7257559 7257907 -64895975 + THE1C LTR MaLR 1 375 0 250 192 13 13 chr20 7258292 7258370 -64895512 + CT-rich Low_complexity Low_complexity 3 80 0 485 304 30 38 chr20 7259482 7259719 -64894163 + L2 LINE L2 2855 3089 -183 906 286 191 0 chr20 7259971 7260349 -64893533 - LTR16C LTR ERVL -8 483 34 186 368 23 35 chr20 7261125 7261212 -64892670 + MIR SINE MIR 6 91 -171 476 279 107 17 chr20 7261599 7261832 -64892050 + MLT1J2 LTR MaLR 67 320 -130 248 158 18 0 chr20 7262622 7262679 -64891203 + CT-rich Low_complexity Low_complexity 1 58 0 2291 219 56 37 chr20 7264249 7264949 -64888933 - L1ME3A LINE L1 -38 6132 5420 257 299 239 27 chr20 7265456 7265640 -64888242 + MIR SINE MIR 19 241 -21 189 200 0 22 chr20 7265611 7265656 -64888226 + L2 LINE L2 3258 3301 -12 * 22 0 0 0 chr20 7266502 7266524 -64887358 + AT_rich Low_complexity Low_complexity 1 22 0 204 318 101 18 chr20 7266695 7266863 -64887019 - MIR SINE MIR -62 146 9 331 325 48 42 chr20 7266943 7267109 -64886773 - L3 LINE CR1 -35 1542 1376 701 211 10 98 chr20 7267163 7267367 -64886515 - MER63A DNA MER1_type -24 186 1 286 293 43 9 chr20 7267367 7267483 -64886399 - L3 LINE CR1 -237 1340 1221 188 397 0 0 chr20 7267501 7267569 -64886313 + MIR SINE MIR 47 114 -148 417 313 19 38 chr20 7267685 7267845 -64886037 + L2 LINE L2 3156 3312 -1 207 347 20 31 chr20 7267873 7267971 -64885911 + MIR3 SINE MIR 98 194 -14 282 276 141 29 chr20 7268018 7268188 -64885694 + MIR SINE MIR 22 210 -52 1696 190 3 23 chr20 7268574 7268879 -64885003 - AluJo SINE Alu -13 299 1 216 261 0 0 chr20 7269217 7269263 -64884619 + CT-rich Low_complexity Low_complexity 2 47 0 2020 120 13 27 chr20 7269757 7270057 -64883825 + AluSx SINE Alu 1 296 -16 181 227 45 0 chr20 7270332 7270376 -64883506 + L2 LINE L2 3268 3313 0 354 270 230 14 chr20 7270640 7270788 -64883094 - MER5A DNA MER1_type -6 183 4 239 331 101 14 chr20 7271903 7272051 -64881831 + MIR3 SINE MIR 44 204 -4 21 0 0 0 chr20 7272230 7272251 -64881631 + AT_rich Low_complexity Low_complexity 1 21 0 312 263 120 87 chr20 7272917 7273366 -64880516 + MLT1J LTR MaLR 6 469 -42 2217 120 73 15 chr20 7274093 7274435 -64879447 - THE1B LTR MaLR -2 362 1 364 321 28 0 chr20 7274598 7274704 -64879178 + L2 LINE L2 3197 3305 -8 2249 171 44 2 chr20 7276862 7277271 -64876611 + MSTB LTR MaLR 1 426 0 2984 210 101 36 chr20 7277787 7279267 -64874615 + L1MDa LINE L1 16 1897 -4643 2470 214 26 14 chr20 7279302 7280020 -64873862 + L1M4 LINE L1 4017 4743 -1403 352 219 0 0 chr20 7280073 7280137 -64873745 - FLAM SINE Alu -12 121 58 1232 306 130 43 chr20 7280263 7281191 -64872691 + L2 LINE L2 1618 2626 -688 1156 193 227 102 chr20 7281192 7281257 -64872625 - MLT1E1 LTR MaLR 0 654 599 2118 132 0 13 chr20 7281257 7281560 -64872322 - AluSx SINE Alu -13 299 1 1156 193 227 102 chr20 7281560 7282075 -64871807 - MLT1E1 LTR MaLR -55 599 1 262 300 149 49 chr20 7282075 7282466 -64871416 + L2 LINE L2 2623 3062 -210 1180 229 26 17 chr20 7283652 7283954 -64869928 - MER65C LTR ERV1 -154 307 3 1870 210 99 38 chr20 7283967 7284501 -64869381 + MLT1F1 LTR MaLR 1 567 0 360 339 22 17 chr20 7284558 7284749 -64869133 - MIR SINE MIR -56 206 17 1490 164 16 6 chr20 7284956 7285267 -64868615 - MER33 DNA MER1_type -5 319 6 237 65 0 0 chr20 7286190 7286221 -64867661 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 2456 51 0 26 chr20 7286874 7287186 -64866696 + AluY SINE Alu 1 304 -7 2398 64 0 20 chr20 7288185 7288482 -64865400 + AluY SINE Alu 1 291 -20 225 254 0 0 chr20 7288524 7288595 -64865287 + (TA)n Simple_repeat Simple_repeat 1 71 0 207 0 0 0 chr20 7289589 7289612 -64864270 + (T)n Simple_repeat Simple_repeat 1 23 0 324 120 0 0 chr20 7289931 7289981 -64863901 + (TG)n Simple_repeat Simple_repeat 2 51 0 237 331 32 35 chr20 7292259 7292415 -64861467 - MIR SINE MIR -34 228 68 286 237 43 21 chr20 7294313 7294406 -64859476 + LTR33 LTR ERVL 413 507 -14 1564 201 62 0 chr20 7294536 7294824 -64859058 + AluJb SINE Alu 2 307 -5 667 213 128 11 chr20 7294937 7295125 -64858757 - MER63A DNA MER1_type 0 210 1 423 301 82 10 chr20 7295183 7295379 -64858503 - LTR16C LTR ERVL -2 489 280 358 307 11 0 chr20 7296296 7296384 -64857498 - L2 LINE L2 -2 3311 3223 2500 90 0 0 chr20 7296713 7297024 -64856858 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr20 7297407 7297436 -64856446 + AT_rich Low_complexity Low_complexity 1 29 0 274 230 160 0 chr20 7297740 7297840 -64856042 + L1MC4 LINE L1 7926 8041 -1 383 278 71 10 chr20 7298797 7298995 -64854887 - L1ME LINE L1 -354 5767 5558 354 267 41 56 chr20 7299023 7299218 -64854664 - L1ME LINE L1 -2495 5500 5309 892 169 111 5 chr20 7301667 7301856 -64852026 + MER3 DNA MER1_type 1 209 0 4837 141 25 11 chr20 7302515 7303459 -64850423 - L1PB4 LINE L1 0 6156 5197 294 355 95 30 chr20 7303834 7304130 -64849752 - L2 LINE L2 -774 2540 2226 183 308 28 137 chr20 7304435 7304646 -64849236 + L2 LINE L2 2994 3181 -91 503 309 91 9 chr20 7304715 7304925 -64848957 + MLT1H LTR MaLR 125 351 -198 189 333 0 30 chr20 7305022 7305088 -64848794 + L2 LINE L2 3245 3308 -5 248 333 77 44 chr20 7305897 7306080 -64847802 - MIR3 SINE MIR -17 191 3 899 221 97 47 chr20 7306248 7306621 -64847261 - MER57A LTR ERV1 0 403 1 1183 234 40 27 chr20 7306621 7306992 -64846890 - L1MD3 LINE L1 -157 7838 7463 24 32 0 0 chr20 7307110 7307141 -64846741 + AT_rich Low_complexity Low_complexity 1 31 0 1239 120 6 0 chr20 7307141 7307308 -64846574 - AluSx SINE Alu -140 172 5 235 326 26 26 chr20 7308799 7308913 -64844969 + MIR SINE MIR 42 154 -73 1163 170 21 59 chr20 7309799 7309864 -64844018 - MLT1C LTR MaLR 0 467 401 2828 13 0 0 chr20 7309864 7310175 -64843707 - AluYa5 SINE Alu 0 311 1 1163 170 21 59 chr20 7310175 7310397 -64843485 - MLT1C LTR MaLR -66 401 191 486 33 0 0 chr20 7310399 7310459 -64843423 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 200 364 45 0 chr20 7310477 7310587 -64843295 - L3 LINE CR1 -62 1515 1401 697 298 44 32 chr20 7311270 7311585 -64842297 + MLT1I LTR MaLR 72 390 -19 307 329 17 68 chr20 7311652 7311889 -64841993 + L2 LINE L2 2305 2529 -785 * 514 323 57 68 chr20 7311886 7312356 -64841526 - L2 LINE L2 -1 3271 2807 541 316 104 4 chr20 7312472 7312703 -64841179 - MIR SINE MIR -3 259 6 258 336 60 0 chr20 7312883 7313017 -64840865 - L2 LINE L2 -836 2478 2337 387 0 0 0 chr20 7314541 7314584 -64839298 + (TG)n Simple_repeat Simple_repeat 1 43 0 222 156 0 0 chr20 7315626 7315671 -64838211 + CT-rich Low_complexity Low_complexity 2 46 0 333 245 238 7 chr20 7315936 7316079 -64837803 - MER5A DNA MER1_type -1 188 13 26 0 0 0 chr20 7316480 7316506 -64837376 + AT_rich Low_complexity Low_complexity 1 26 0 382 61 30 30 chr20 7316795 7316861 -64837021 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 180 0 0 0 chr20 7319932 7319952 -64833930 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1978 158 3 3 chr20 7320312 7320623 -64833259 + AluSx SINE Alu 1 311 -1 519 246 87 0 chr20 7320674 7320800 -64833082 + MIR SINE MIR 72 208 -54 260 217 72 14 chr20 7321660 7321729 -64832153 - MER116 DNA Mariner -5 75 3 373 279 137 12 chr20 7322611 7322772 -64831110 + MER5A DNA MER1_type 9 189 0 22 35 0 0 chr20 7323400 7323429 -64830453 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr20 7325172 7325200 -64828682 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 57 0 0 chr20 7327474 7327509 -64826373 + AT_rich Low_complexity Low_complexity 1 35 0 261 0 0 0 chr20 7328382 7328411 -64825471 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 486 228 25 122 chr20 7328619 7328816 -64825066 - MER5A DNA MER1_type -8 181 4 183 42 0 0 chr20 7429730 7429754 -64724128 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 733 174 8 0 chr20 7429800 7429932 -64723950 + FLAM_C SINE Alu 1 133 0 33 66 0 0 chr20 7430616 7430677 -64723205 + AT_rich Low_complexity Low_complexity 1 61 0 1364 137 49 4 chr20 7431024 7431250 -64722632 + MER46A DNA MER2_type 1 236 0 214 229 34 8 chr20 7431273 7431391 -64722491 + (TA)n Simple_repeat Simple_repeat 2 122 0 533 292 123 42 chr20 7431666 7432067 -64721815 + MLT1J LTR MaLR 1 441 -70 1957 167 0 0 chr20 7432067 7432366 -64721516 + AluJb SINE Alu 1 299 -13 533 292 123 42 chr20 7432366 7432395 -64721487 + MLT1J LTR MaLR 441 466 -45 592 263 126 10 chr20 7433523 7433721 -64720161 + MIR SINE MIR 20 240 -22 22 0 0 0 chr20 7433848 7433870 -64720012 + AT_rich Low_complexity Low_complexity 1 22 0 274 242 0 0 chr20 7434388 7434454 -64719428 - LTR16C LTR ERVL 0 491 426 315 0 0 0 chr20 7435012 7435047 -64718835 + (CA)n Simple_repeat Simple_repeat 1 35 0 711 253 192 47 chr20 7435481 7435987 -64717895 + MLT1G LTR MaLR 12 590 0 804 311 60 24 chr20 7436980 7437360 -64716522 - LTR16C LTR ERVL -13 478 85 555 225 12 23 chr20 7438197 7438458 -64715424 + CT-rich Low_complexity Low_complexity 1 257 0 549 333 26 4 chr20 7438702 7438933 -64714949 + MIR SINE MIR 1 236 -26 1281 50 0 0 chr20 7439240 7439401 -64714481 - L1PA4 LINE L1 -3 6152 5992 595 198 117 41 chr20 7439670 7439867 -64714015 + MLT1H LTR MaLR 86 297 -252 486 223 11 69 chr20 7439902 7440068 -64713814 + MLT1H LTR MaLR 392 542 0 411 268 10 0 chr20 7440638 7440735 -64713147 - L2 LINE L2 -6 3266 3169 337 297 71 32 chr20 7441739 7441894 -64711988 - L2 LINE L2 -2 3270 3110 522 196 0 0 chr20 7441908 7442005 -64711877 + MER5A DNA MER1_type 88 184 -5 240 35 0 0 chr20 7442157 7442186 -64711696 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr20 7442332 7442356 -64711526 + AT_rich Low_complexity Low_complexity 1 24 0 512 316 73 9 chr20 7442560 7442778 -64711104 - LTR16A LTR ERVL -12 438 207 385 298 85 48 chr20 7443583 7443771 -64710111 - MIR3 SINE MIR -5 203 9 1366 264 180 5 chr20 7443787 7444348 -64709534 + MLT2F LTR ERVL 1 659 -4 747 230 86 19 chr20 7444559 7444768 -64709114 - MIR SINE MIR 0 262 40 312 324 22 7 chr20 7444979 7445118 -64708764 - MER117 DNA MER1_type -36 161 21 380 188 152 25 chr20 7445816 7446064 -64707818 + MLT1H LTR MaLR 207 536 -13 240 196 0 0 chr20 7446876 7446922 -64706960 - LTR16A1 LTR ERVL -167 290 245 285 343 21 7 chr20 7447055 7447198 -64706684 - LTR16A1 LTR ERVL -305 152 8 363 237 51 0 chr20 7448034 7448152 -64705730 - L1ME2 LINE L1 -1 6163 6040 430 195 0 2 chr20 7448154 7448250 -64705632 + L1M4 LINE L1 5469 5563 -611 * 1758 144 164 15 chr20 7448244 7448647 -64705235 + L1PA16 LINE L1 5703 6165 -1 856 204 23 42 chr20 7448671 7448935 -64704947 - L1ME2 LINE L1 -114 6050 5792 206 288 100 12 chr20 7450117 7450197 -64703685 + MIR3 SINE MIR 119 205 -3 21 36 0 0 chr20 7450304 7450332 -64703550 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr20 7450408 7450434 -64703448 + AT_rich Low_complexity Low_complexity 1 26 0 659 226 60 93 chr20 7450469 7450606 -64703276 + MIR SINE MIR 21 148 -114 2315 98 0 7 chr20 7450606 7450913 -64702969 - AluSx SINE Alu -7 305 1 659 226 60 93 chr20 7450913 7451023 -64702859 + MIR SINE MIR 148 260 -2 2307 89 0 3 chr20 7451294 7451608 -64702274 - AluSx SINE Alu 0 312 1 310 379 33 0 chr20 7452602 7452755 -64701127 - MIR SINE MIR -17 245 88 642 187 120 0 chr20 7454395 7454545 -64699337 + MIR SINE MIR 92 259 -3 630 345 37 34 chr20 7454621 7455001 -64698881 + L3 LINE CR1 1180 1560 -17 21 0 0 0 chr20 7456381 7456402 -64697480 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr20 7456509 7456539 -64697343 + AT_rich Low_complexity Low_complexity 1 30 0 828 325 13 0 chr20 7457146 7457383 -64696499 - MIR SINE MIR -11 251 12 238 292 0 0 chr20 7457450 7457522 -64696360 - L1ME2 LINE L1 -448 5673 5602 328 248 50 59 chr20 7458446 7458547 -64695335 - L2 LINE L2 -17 3255 3156 1026 32 0 0 chr20 7458580 7458706 -64695176 + L1PA4 LINE L1 6030 6155 0 545 303 126 39 chr20 7458816 7459228 -64694654 + MLT1H LTR MaLR 2 449 -100 577 327 71 40 chr20 7459398 7459820 -64694062 - L2 LINE L2 -744 2570 2136 195 100 0 0 chr20 7459824 7459854 -64694028 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 37 0 0 chr20 7460197 7460224 -64693658 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 1790 117 4 0 chr20 7460538 7460778 -64693104 + AluSp SINE Alu 59 299 -14 274 264 0 14 chr20 7460784 7460856 -64693026 - L2 LINE L2 -333 2980 2910 2361 110 0 0 chr20 7462403 7462712 -64691170 + AluSc SINE Alu 1 309 0 1623 145 30 7 chr20 7463706 7463975 -64689907 - AluSx SINE Alu -37 275 1 24 32 0 0 chr20 7465522 7465553 -64688329 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr20 7466286 7466315 -64687567 + AT_rich Low_complexity Low_complexity 1 29 0 187 367 0 0 chr20 7466579 7466639 -64687243 + L2 LINE L2 3240 3299 -14 2184 182 36 19 chr20 7466892 7467310 -64686572 + MSTB LTR MaLR 2 426 0 300 272 328 0 chr20 7467556 7467681 -64686201 - MER5A DNA MER1_type -7 182 17 * 360 352 31 0 chr20 7467669 7467797 -64686085 - MER5B DNA MER1_type -45 133 2 275 349 171 7 chr20 7468053 7468199 -64685683 + MER5A DNA MER1_type 14 183 -6 338 208 65 0 chr20 7468761 7468838 -64685044 + MER5A DNA MER1_type 25 106 -83 361 269 48 10 chr20 7469247 7469351 -64684531 + MIR SINE MIR 74 181 -81 666 205 0 0 chr20 7469378 7469500 -64684382 - FLAM_A SINE Alu -11 122 1 375 41 0 0 chr20 7469755 7469804 -64684078 + (TG)n Simple_repeat Simple_repeat 1 49 0 638 298 178 24 chr20 7470215 7470677 -64683205 + L2 LINE L2 2784 3312 -1 619 295 141 27 chr20 7471611 7471981 -64681901 + MLT1J2 LTR MaLR 21 432 -18 596 242 24 0 chr20 7472116 7472240 -64681642 - FLAM_A SINE Alu -6 127 1 200 119 0 24 chr20 7473904 7473946 -64679936 + (CAAAA)n Simple_repeat Simple_repeat 4 44 0 257 191 17 0 chr20 7473968 7474058 -64679824 + L1MB8 LINE L1 5276 5369 -815 1093 167 93 0 chr20 7474058 7474262 -64679620 + AluJb SINE Alu 83 305 -7 3620 181 37 10 chr20 7474272 7475051 -64678831 + L1MB8 LINE L1 5379 6178 0 558 213 160 13 chr20 7475716 7475866 -64678016 + MER5A DNA MER1_type 9 180 -9 426 325 25 12 chr20 7475881 7476041 -64677841 + MIR SINE MIR 45 206 -56 215 233 78 112 chr20 7476237 7476353 -64677529 - MIR SINE MIR -32 230 119 1191 239 8 32 chr20 7476475 7476844 -64677038 - L1ME3 LINE L1 -1 6161 5802 579 297 238 7 chr20 7477495 7477564 -64676318 + L3 LINE CR1 416 468 -1109 2079 143 16 3 chr20 7477564 7477872 -64676010 + AluSx SINE Alu 1 312 0 579 297 238 7 chr20 7477872 7478256 -64675626 + L3 LINE CR1 468 974 -603 6364 34 0 14 chr20 7478316 7479131 -64674751 - L1PA5 LINE L1 0 6154 5351 618 325 129 61 chr20 7479207 7479911 -64673971 + L1MEd LINE L1 210 961 -5158 617 238 69 61 chr20 7479913 7480273 -64673609 - LTR18B LTR ERVL 0 614 1 303 314 112 12 chr20 7480283 7480541 -64673341 + L1MEd LINE L1 970 1253 -4866 498 338 80 27 chr20 7480548 7480950 -64672932 + L1MEd LINE L1 1304 1726 -4584 423 38 0 0 chr20 7481620 7481673 -64672209 + (CA)n Simple_repeat Simple_repeat 1 53 0 21 0 0 0 chr20 7481813 7481834 -64672048 + AT_rich Low_complexity Low_complexity 1 21 0 244 259 0 0 chr20 7482574 7482628 -64671254 + MIR SINE MIR 177 230 -32 348 218 0 0 chr20 7482691 7482778 -64671104 + (TA)n Simple_repeat Simple_repeat 2 88 0 421 242 37 99 chr20 7483331 7483492 -64670390 - MIR SINE MIR -83 179 29 911 148 18 6 chr20 7483731 7483900 -64669982 - MER3 DNA MER1_type -85 124 1 336 239 137 43 chr20 7483916 7484033 -64669849 + MER5A DNA MER1_type 9 136 -53 1273 228 72 6 chr20 7486485 7486917 -64666965 + MER89 LTR ERV1 1 559 0 327 49 0 0 chr20 7487062 7487103 -64666779 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr20 7487212 7487233 -64666649 + AT_rich Low_complexity Low_complexity 1 21 0 1691 163 15 24 chr20 7487825 7488162 -64665720 + MLT1A1 LTR MaLR 17 350 -15 23 33 0 0 chr20 7488231 7488261 -64665621 + AT_rich Low_complexity Low_complexity 1 30 0 1806 56 0 0 chr20 7489169 7489384 -64664498 + AluY SINE Alu 93 307 -4 2167 105 17 0 chr20 7489472 7489766 -64664116 - AluSp SINE Alu -14 299 1 234 91 0 0 chr20 7489812 7489845 -64664037 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 693 278 126 25 chr20 7489851 7490168 -64663714 - L2 LINE L2 -8 3305 2957 774 286 181 20 chr20 7490191 7490623 -64663259 + L2 LINE L2 2418 2779 -534 1765 188 31 31 chr20 7490623 7491011 -64662871 - MLT1B LTR MaLR -2 388 1 774 286 181 20 chr20 7491011 7491337 -64662545 + L2 LINE L2 2779 3308 -5 426 294 89 20 chr20 7491337 7491483 -64662399 - MIR SINE MIR -77 185 30 210 329 52 118 chr20 7491999 7492346 -64661536 + L2 LINE L2 2935 3258 -14 294 252 7 14 chr20 7492910 7493049 -64660833 + GA-rich Low_complexity Low_complexity 3 140 0 219 182 23 0 chr20 7493082 7493126 -64660756 + GA-rich Low_complexity Low_complexity 4 48 0 2198 118 0 7 chr20 7493172 7493476 -64660406 + AluSx SINE Alu 1 302 -10 356 261 74 80 chr20 7494979 7495290 -64658592 - LTR16C LTR ERVL -2 489 181 277 292 283 0 chr20 7495565 7495678 -64658204 + MIR SINE MIR 118 262 0 264 286 0 0 chr20 7495862 7495925 -64657957 - MIR3 SINE MIR -2 206 144 615 320 111 20 chr20 7497021 7497365 -64656517 - L3 LINE CR1 -67 1510 1136 194 258 136 68 chr20 7497461 7497593 -64656289 - MIR SINE MIR -118 144 4 225 299 189 8 chr20 7497622 7497749 -64656133 - L3 LINE CR1 -483 1094 945 187 396 7 22 chr20 7497832 7497971 -64655911 - L3 LINE CR1 -795 782 646 5497 62 4 5 chr20 7498132 7498892 -64654990 - L1PA5 LINE L1 -1876 4270 3512 9024 41 3 10 chr20 7498893 7500776 -64653106 + L1PA5 LINE L1 4272 6148 -6 386 301 90 46 chr20 7500902 7501266 -64652616 - LTR33 LTR ERVL -133 390 32 2284 115 0 6 chr20 7501542 7501854 -64652028 + AluSg SINE Alu 1 310 0 1026 233 34 48 chr20 7502279 7502631 -64651251 + MLT1A1 LTR MaLR 19 365 0 1831 111 0 32 chr20 7503864 7504179 -64649703 - L1MA5A LINE L1 -3 6294 5990 354 294 58 34 chr20 7506236 7506648 -64647234 - L1M4 LINE L1 -848 5298 4877 22 94 0 0 chr20 7506758 7506822 -64647060 + AT_rich Low_complexity Low_complexity 1 64 0 383 314 50 69 chr20 7507624 7507727 -64646155 + MLT1K LTR MaLR 94 197 -391 2094 139 0 0 chr20 7507727 7508038 -64645844 + AluSx SINE Alu 1 311 0 383 314 50 69 chr20 7508038 7508193 -64645689 + MLT1K LTR MaLR 197 349 -239 225 140 20 40 chr20 7508233 7508283 -64645599 + GA-rich Low_complexity Low_complexity 1 49 0 1642 118 80 42 chr20 7508468 7508757 -64645125 - AluSx SINE Alu -12 300 1 1187 223 101 78 chr20 7509049 7509574 -64644308 - MLT1E1 LTR MaLR -117 537 1 318 250 177 0 chr20 7510049 7510145 -64643737 + MIR SINE MIR 12 124 -138 365 313 17 0 chr20 7510288 7510403 -64643479 - L2 LINE L2 -4 3309 3193 200 313 92 15 chr20 7510426 7510557 -64643325 + L2 LINE L2 3168 3308 -5 375 60 0 0 chr20 7511067 7511117 -64642765 + (GGA)n Simple_repeat Simple_repeat 2 51 0 526 296 40 0 chr20 7511126 7511302 -64642580 - MIR SINE MIR -12 250 68 763 223 82 89 chr20 7512246 7512363 -64641519 + MLT1B LTR MaLR 1 117 -273 207 69 0 0 chr20 7512363 7512392 -64641490 + (ATAGG)n Simple_repeat Simple_repeat 4 32 0 763 223 82 89 chr20 7512392 7512413 -64641469 + MLT1B LTR MaLR 117 137 -253 2049 121 42 3 chr20 7512413 7512743 -64641139 + MER61A LTR ERV1 1 343 0 763 223 82 89 chr20 7512743 7512975 -64640907 + MLT1B LTR MaLR 137 390 0 401 304 7 0 chr20 7513194 7513329 -64640553 + MER46C DNA MER2_type 1 136 -202 189 196 0 0 chr20 7513383 7513429 -64640453 + CT-rich Low_complexity Low_complexity 4 49 0 29 84 0 0 chr20 7513705 7513776 -64640106 + AT_rich Low_complexity Low_complexity 1 71 0 1831 147 0 26 chr20 7513822 7514129 -64639753 - AluJo SINE Alu -1 311 13 2225 123 0 0 chr20 7516291 7516592 -64637290 + AluSx SINE Alu 1 301 -11 3416 123 65 9 chr20 7516731 7517302 -64636580 + LTR26 LTR ERV1 1 603 0 1844 148 25 0 chr20 7517600 7517878 -64636004 + AluSx SINE Alu 1 285 -27 927 239 29 11 chr20 7517996 7518268 -64635614 - L1MA9 LINE L1 -38 6274 5998 195 129 0 0 chr20 7519161 7519192 -64634690 + (T)n Simple_repeat Simple_repeat 1 31 0 240 246 134 60 chr20 7519248 7519382 -64634500 + MER5A DNA MER1_type 9 152 -37 2283 122 98 166 chr20 7519395 7520065 -64633817 + MER51A LTR ERV1 1 625 -9 443 250 88 54 chr20 7521518 7521722 -64632160 - L2 LINE L2 0 3313 3103 682 299 69 9 chr20 7521783 7522017 -64631865 - MIR SINE MIR -10 252 2 401 195 98 24 chr20 7522233 7522356 -64631526 - L1ME2 LINE L1 -9 6155 6024 543 268 159 19 chr20 7522915 7523072 -64630810 - MER5A DNA MER1_type -2 187 9 455 232 58 0 chr20 7523156 7523294 -64630588 + MER103 DNA DNA 8 153 -13 1147 206 41 4 chr20 7524172 7524415 -64629467 + L1PA16 LINE L1 5892 6143 -23 226 301 55 0 chr20 7524624 7524697 -64629185 - MIR SINE MIR -68 194 118 1994 179 6 8 chr20 7525061 7525424 -64628458 - MER47A DNA MER2_type -1 365 4 23 68 0 0 chr20 7526120 7526164 -64627718 + AT_rich Low_complexity Low_complexity 1 44 0 29 70 0 0 chr20 7526187 7526244 -64627638 + AT_rich Low_complexity Low_complexity 1 57 0 254 264 46 0 chr20 7526492 7526579 -64627303 - MLT2E LTR ERVL -19 609 519 284 288 0 0 chr20 7526634 7526700 -64627182 - MLT2E LTR ERVL -361 267 202 * 496 322 62 9 chr20 7526682 7526893 -64626989 - MLT2F LTR ERVL -246 417 196 236 279 38 0 chr20 7527416 7527495 -64626387 + (TA)n Simple_repeat Simple_repeat 1 82 0 261 0 0 0 chr20 7527508 7527522 -64626360 + (TG)n Simple_repeat Simple_repeat 1 14 -264 1794 69 0 0 chr20 7527522 7527738 -64626144 + AluY SINE Alu 96 311 0 261 0 0 0 chr20 7527738 7527757 -64626125 + (TG)n Simple_repeat Simple_repeat 13 278 0 261 0 0 0 chr20 7527757 7527786 -64626096 + (TG)n Simple_repeat Simple_repeat 2 30 0 351 0 0 0 chr20 7527842 7527881 -64626001 + (TG)n Simple_repeat Simple_repeat 2 40 0 532 309 14 19 chr20 7529170 7529377 -64624505 + LTR16C LTR ERVL 285 490 -1 312 195 293 0 chr20 7529859 7529941 -64623941 - MER5A DNA MER1_type -35 154 49 947 189 68 0 chr20 7529971 7530161 -64623721 - MER3 DNA MER1_type -1 208 6 21 0 0 0 chr20 7531588 7531609 -64622273 + AT_rich Low_complexity Low_complexity 1 21 0 276 254 130 7 chr20 7531833 7531971 -64621911 - L1ME4a LINE L1 0 6121 5967 248 282 94 12 chr20 7532111 7532196 -64621686 - MIR SINE MIR -71 191 100 2051 129 7 3 chr20 7532753 7533056 -64620826 - AluSq SINE Alu -9 304 1 1107 214 18 14 chr20 7533361 7533636 -64620246 - MER33 DNA MER1_type -1 323 48 1231 222 109 50 chr20 7533696 7534137 -64619745 - MLT1C LTR MaLR 0 467 1 22 56 0 0 chr20 7534137 7534173 -64619709 + AT_rich Low_complexity Low_complexity 1 36 0 39 0 0 0 chr20 7534266 7534305 -64619577 + AT_rich Low_complexity Low_complexity 1 39 0 1163 251 122 14 chr20 7534332 7534766 -64619116 + L1ME3A LINE L1 5452 5932 -238 308 162 86 38 chr20 7534894 7534999 -64618883 + L2 LINE L2 3078 3187 -126 2230 108 0 0 chr20 7535035 7535367 -64618515 + AluSq SINE Alu 1 332 0 193 298 39 58 chr20 7536005 7536109 -64617773 - MIR3 SINE MIR -97 111 10 205 182 0 0 chr20 7536334 7536367 -64617515 + T-rich Low_complexity Low_complexity 3 35 0 751 186 60 36 chr20 7536368 7536535 -64617347 - FAM SINE Alu -1 174 4 3067 184 27 33 chr20 7536566 7537087 -64616795 - L1MC3 LINE L1 -35 7750 7232 2646 96 3 0 chr20 7537087 7537441 -64616441 + THE1A LTR MaLR 1 355 0 3067 184 27 33 chr20 7537441 7537614 -64616268 - L1MC3 LINE L1 -553 7232 7060 22 35 0 0 chr20 7537627 7537656 -64616226 + AT_rich Low_complexity Low_complexity 1 29 0 246 245 0 0 chr20 7537685 7537738 -64616144 - L1MD3 LINE L1 -1426 6569 6517 1297 193 101 26 chr20 7538735 7539082 -64614800 + MER63B DNA MER1_type 1 373 -63 1368 215 102 94 chr20 7539201 7539723 -64614159 + MLT1H LTR MaLR 1 526 -23 209 364 98 14 chr20 7540441 7540584 -64613298 - MIR3 SINE MIR -21 187 33 715 177 0 0 chr20 7541068 7541181 -64612701 - AluJb SINE Alu -64 248 136 747 201 12 35 chr20 7541391 7541560 -64612322 - FRAM SINE Alu -1 165 1 518 337 136 47 chr20 7541826 7541921 -64611961 + L1MC4a LINE L1 4152 4237 -1909 2283 78 0 44 chr20 7541921 7542241 -64611641 - AluY SINE Alu -5 306 1 518 337 136 47 chr20 7542241 7542877 -64611005 + L1MC4a LINE L1 4237 4968 -1178 314 286 94 63 chr20 7542877 7543272 -64610610 + MLT1I LTR MaLR 1 407 -2 518 337 136 47 chr20 7543272 7543372 -64610510 + L1MC4a LINE L1 4968 5058 -1088 987 304 61 43 chr20 7543588 7544148 -64609734 + L1MC4a LINE L1 5316 5885 -1923 524 276 47 105 chr20 7545536 7546021 -64607861 + L1MC4a LINE L1 4866 5322 -824 1556 184 36 36 chr20 7546051 7546411 -64607471 + MLT1A1 LTR MaLR 1 621 -5 363 242 16 16 chr20 7546455 7546583 -64607299 + (TA)n Simple_repeat Simple_repeat 2 129 0 1017 299 102 6 chr20 7546585 7547103 -64606779 + L1MC4a LINE L1 5365 5932 -1876 319 352 100 44 chr20 7547249 7547749 -64606133 + L1MC4a LINE L1 6042 6569 -1239 326 335 78 35 chr20 7547753 7548010 -64605872 + L1ME4a LINE L1 5617 5884 -237 374 331 60 0 chr20 7550157 7550290 -64603592 - MIR SINE MIR -59 203 63 346 145 246 0 chr20 7551096 7551165 -64602717 - MER103 DNA DNA -73 93 8 1219 165 99 29 chr20 7551165 7551407 -64602475 - AluJo SINE Alu -48 264 6 207 381 59 17 chr20 7552225 7552343 -64601539 - MIR3 SINE MIR -37 171 49 1242 188 33 112 chr20 7552343 7552737 -64601145 - MLT1A1 LTR MaLR 0 365 3 389 70 18 0 chr20 7552975 7553032 -64600850 + (TA)n Simple_repeat Simple_repeat 1 58 0 520 340 72 0 chr20 7553804 7554013 -64599869 - MIR SINE MIR -31 231 8 1866 184 29 18 chr20 7554306 7554692 -64599190 + MLT1B LTR MaLR 1 390 0 682 212 27 65 chr20 7554872 7555056 -64598826 - MER5B DNA MER1_type -1 177 1 189 107 0 0 chr20 7556017 7556045 -64597837 + (CA)n Simple_repeat Simple_repeat 1 28 0 353 252 50 25 chr20 7556681 7556800 -64597082 + L2 LINE L2 1963 2084 -1230 26 0 0 0 chr20 7556800 7556826 -64597056 + AT_rich Low_complexity Low_complexity 1 26 0 1471 108 47 0 chr20 7556826 7557058 -64596824 - L1MB3 LINE L1 -11 6172 5930 11077 127 27 14 chr20 7557058 7558832 -64595050 + Tigger1 DNA MER2_type 2 1799 -619 26109 131 12 21 chr20 7558832 7561949 -64591933 + L1PA8A LINE L1 7 3150 -3296 2161 91 10 17 chr20 7561949 7562245 -64591637 + AluY SINE Alu 1 294 -17 2105 85 0 7 chr20 7562247 7562519 -64591363 + AluY SINE Alu 35 304 -7 26109 131 12 21 chr20 7562519 7565819 -64588063 + L1PA8A LINE L1 3151 6440 -6 3374 151 29 43 chr20 7565851 7566500 -64587382 + Tigger1 DNA MER2_type 1779 2418 0 1137 152 4 8 chr20 7566500 7566744 -64587138 - L1MB3 LINE L1 -251 5932 5641 1837 289 117 17 chr20 7566745 7567670 -64586212 + L2 LINE L2 2070 3145 -168 511 272 46 41 chr20 7567688 7567839 -64586043 - MER63A DNA MER1_type -1485 203 49 2535 68 0 0 chr20 7567839 7568148 -64585734 - AluY SINE Alu -2 309 1 511 272 46 41 chr20 7568148 7568191 -64585691 - MER63A DNA MER1_type -1639 49 8 349 236 34 11 chr20 7568212 7568301 -64585581 + L2 LINE L2 3202 3292 -21 198 0 0 0 chr20 7568830 7568852 -64585030 + (T)n Simple_repeat Simple_repeat 1 22 0 245 282 120 8 chr20 7569002 7569119 -64584763 - MIR3 SINE MIR -36 172 43 463 245 94 38 chr20 7569229 7569441 -64584441 + MER112 DNA MER1_type 30 253 -7 2108 111 46 32 chr20 7570351 7570720 -64583162 - THE1C LTR MaLR -1 374 1 487 231 98 69 chr20 7571165 7571338 -64582544 + MER5B DNA MER1_type 1 178 0 298 283 101 50 chr20 7571338 7571494 -64582388 - MIR SINE MIR -46 216 53 30 0 0 0 chr20 7572318 7572348 -64581534 + AT_rich Low_complexity Low_complexity 1 30 0 237 309 82 18 chr20 7575677 7575787 -64578095 - L2 LINE L2 0 3313 3197 2087 148 3 0 chr20 7576240 7576551 -64577331 - AluSx SINE Alu 0 312 1 284 361 46 3 chr20 7577158 7577308 -64576574 + MIR3 SINE MIR 14 167 -63 831 233 5 11 chr20 7577308 7577497 -64576385 - MER5A DNA MER1_type 0 189 2 207 351 18 35 chr20 7579508 7579622 -64574260 + MIR SINE MIR 30 141 -67 290 269 54 0 chr20 7580873 7580966 -64572916 - MIR SINE MIR -56 206 109 2014 174 155 54 chr20 7581038 7581630 -64572252 + MLT1E1 LTR MaLR 3 654 0 249 216 0 0 chr20 7581812 7581863 -64572019 - MIR SINE MIR -71 137 87 815 198 43 32 chr20 7583195 7583382 -64570500 + MER5A DNA MER1_type 1 189 0 637 280 43 10 chr20 7584635 7584842 -64569040 + LTR16A1 LTR ERVL 231 444 -13 208 163 0 23 chr20 7586185 7586228 -64567654 + GA-rich Low_complexity Low_complexity 4 45 0 1860 136 3 11 chr20 7586256 7586543 -64567339 + AluSx SINE Alu 10 294 -18 823 153 0 8 chr20 7587136 7587267 -64566615 - FLAM_C SINE Alu -3 130 1 1040 201 5 5 chr20 7588332 7588521 -64565361 + MER5A DNA MER1_type 1 189 0 452 321 24 18 chr20 7589331 7589499 -64564383 + MLT1J2 LTR MaLR 253 421 -29 337 277 59 0 chr20 7589650 7589757 -64564125 - MIR SINE MIR -62 146 38 212 218 126 23 chr20 7589987 7590074 -64563808 + MIR SINE MIR 132 227 -35 851 194 23 28 chr20 7590526 7590743 -64563139 - L1MB3 LINE L1 -3 6180 5965 10395 205 58 24 chr20 7590765 7594068 -64559814 - L1MC3 LINE L1 0 7785 4353 4364 108 9 3 chr20 7594068 7594714 -64559168 + L1PA11 LINE L1 5524 6173 -1 10395 205 58 24 chr20 7594714 7594894 -64558988 - L1MC3 LINE L1 -3432 4353 4181 387 180 27 18 chr20 7595687 7595798 -64558084 + (TATATG)n Simple_repeat Simple_repeat 2 113 0 910 296 36 13 chr20 7596042 7596434 -64557448 - MLT1J LTR MaLR 0 511 111 984 78 0 0 chr20 7596795 7596923 -64556959 - AluY SINE Alu -7 304 177 557 159 39 154 chr20 7599051 7599233 -64554649 + MER20 DNA MER1_type 1 161 -58 830 209 6 0 chr20 7601320 7601483 -64552399 + MER5A DNA MER1_type 3 166 -23 458 273 167 13 chr20 7601524 7601674 -64552208 + MER5A DNA MER1_type 11 183 -6 620 320 81 13 chr20 7602802 7603036 -64550846 + MIR SINE MIR 13 262 0 295 275 117 85 chr20 7603085 7603586 -64550296 - L2 LINE L2 -146 3167 1739 2618 23 0 7 chr20 7604068 7604378 -64549504 + AluY SINE Alu 1 308 -3 462 311 33 22 chr20 7604742 7604812 -64549070 - MIR SINE MIR -14 248 180 761 210 45 19 chr20 7604812 7604969 -64548913 - FRAM SINE Alu -5 161 1 462 311 33 22 chr20 7604969 7605078 -64548804 - MIR SINE MIR -82 180 67 2153 225 40 41 chr20 7605519 7606150 -64547732 + L1ME2 LINE L1 5525 6154 -10 28 29 0 0 chr20 7606596 7606631 -64547251 + AT_rich Low_complexity Low_complexity 1 35 0 779 318 19 19 chr20 7607423 7607684 -64546198 + MIR SINE MIR 2 262 0 181 299 117 13 chr20 7608047 7608124 -64545758 - L3 LINE CR1 -9 1568 1484 384 243 271 0 chr20 7608148 7608292 -64545590 + MER5A DNA MER1_type 7 189 0 399 341 43 12 chr20 7610353 7610517 -64543365 - MIR SINE MIR -10 252 84 2423 87 3 0 chr20 7610552 7610864 -64543018 - AluSp SINE Alu 0 313 1 1040 215 9 27 chr20 7611092 7611315 -64542567 - MER20 DNA MER1_type 0 219 1 627 246 161 42 chr20 7611464 7611850 -64542032 - MLT1J2 LTR MaLR -18 432 1 760 284 84 9 chr20 7612091 7612306 -64541576 + MIR SINE MIR 1 231 -31 206 237 0 0 chr20 7612782 7612820 -64541062 - MIR SINE MIR -63 145 108 249 222 16 0 chr20 7613755 7613818 -64540064 + MER116 DNA Mariner 15 78 -2 766 283 22 9 chr20 7614408 7614634 -64539248 + MIR SINE MIR 34 262 0 198 277 23 0 chr20 7716001 7716131 -64437751 + CT-rich Low_complexity Low_complexity 2 134 0 508 238 0 0 chr20 7716191 7716292 -64437590 - L1PB4 LINE L1 -7 6149 6049 234 0 0 0 chr20 7716435 7716461 -64437421 + (CA)n Simple_repeat Simple_repeat 2 27 0 1866 143 3 14 chr20 7718269 7718562 -64435320 - AluSx SINE Alu -22 290 1 3568 204 35 74 chr20 7718890 7719478 -64434404 - L1ME2 LINE L1 -8 6156 5635 3910 53 0 0 chr20 7719478 7719929 -64433953 - L1PA6 LINE L1 -1 6153 5703 3568 204 35 74 chr20 7719929 7720514 -64433368 - L1ME2 LINE L1 -529 5635 5028 289 305 0 0 chr20 7720562 7720657 -64433225 + (CCAA)n Simple_repeat Simple_repeat 4 98 0 219 293 32 81 chr20 7721600 7721723 -64432159 - MIR SINE MIR -62 146 30 1795 197 21 44 chr20 7723999 7724435 -64429447 - MLT1C LTR MaLR 0 467 42 252 130 0 0 chr20 7724465 7724511 -64429371 + (TA)n Simple_repeat Simple_repeat 2 47 0 342 214 0 82 chr20 7724521 7724619 -64429263 - L1MC4 LINE L1 -1339 6703 6614 201 210 0 0 chr20 7724625 7724687 -64429195 + (TA)n Simple_repeat Simple_repeat 2 63 0 944 309 28 21 chr20 7725113 7725629 -64428253 + L2 LINE L2 2520 3036 -277 1206 244 88 65 chr20 7725806 7726297 -64427585 + MLT1D LTR MaLR 4 505 0 * 1484 226 31 56 chr20 7726297 7726732 -64427150 + Charlie4a DNA MER1_type 42 465 -43 329 0 24 0 chr20 7726777 7726818 -64427064 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 231 314 157 0 chr20 7726832 7726934 -64426948 - MIR3 SINE MIR -49 159 42 182 174 0 43 chr20 7727290 7727336 -64426546 + L2 LINE L2 3270 3313 0 213 39 0 0 chr20 7728604 7728630 -64425252 + (A)n Simple_repeat Simple_repeat 1 26 0 243 0 0 0 chr20 7729132 7729159 -64424723 + (T)n Simple_repeat Simple_repeat 1 27 0 1355 240 120 28 chr20 7729183 7729642 -64424240 - LTR33 LTR ERVL 0 521 21 2276 49 0 0 chr20 7729928 7730194 -64423688 + AluY SINE Alu 1 266 -45 957 253 120 31 chr20 7730202 7730585 -64423297 + LTR33 LTR ERVL 105 521 0 245 329 13 0 chr20 7731221 7731300 -64422582 - MIR3 SINE MIR -19 189 110 312 360 53 11 chr20 7731314 7731503 -64422379 - MER117 DNA MER1_type 0 197 1 916 142 7 7 chr20 7731912 7732067 -64421815 - LTR32 LTR ERVL 0 471 317 231 162 0 0 chr20 7732074 7732111 -64421771 - LTR32 LTR ERVL -119 352 316 2022 177 24 0 chr20 7732113 7732447 -64421435 - LTR32 LTR ERVL -122 349 8 502 145 0 0 chr20 7732636 7732712 -64421170 + MER116 DNA Mariner 5 80 0 592 235 0 0 chr20 7732900 7733015 -64420867 + FLAM_A SINE Alu 1 115 -18 218 196 36 18 chr20 7733109 7733165 -64420717 - MER91C DNA MER1_type -30 110 54 238 337 69 0 chr20 7733553 7733654 -64420228 + MIR SINE MIR 36 143 -65 302 333 108 20 chr20 7733973 7734222 -64419660 + LTR16A1 LTR ERVL 179 449 -8 235 278 28 0 chr20 7735676 7735748 -64418134 - L1ME4a LINE L1 -72 6049 5976 387 301 74 45 chr20 7735918 7736380 -64417502 - L1ME4a LINE L1 -119 6002 5528 216 143 0 0 chr20 7737217 7737259 -64416623 + (TG)n Simple_repeat Simple_repeat 1 42 0 492 302 22 17 chr20 7737269 7737448 -64416434 - LTR16C LTR ERVL -6 485 306 917 291 131 24 chr20 7737952 7738327 -64415555 + MLT1K LTR MaLR 159 573 -15 252 211 0 0 chr20 7738385 7738437 -64415445 - L2 LINE L2 -1 3312 3261 495 307 125 51 chr20 7738751 7739142 -64414740 - MLT1H LTR MaLR 0 549 130 494 315 91 14 chr20 7739884 7740103 -64413779 + MIR SINE MIR 15 250 -12 2539 119 22 11 chr20 7740173 7740533 -64413349 - THE1B LTR MaLR 0 364 1 2495 79 3 0 chr20 7740825 7741165 -64412717 - L1P LINE L1 -3038 3108 2768 402 37 0 0 chr20 7741141 7741195 -64412687 - L1P LINE L1 -2781 3365 3312 * 17248 84 8 0 chr20 7741195 7744224 -64409658 + L1PA7 LINE L1 3119 6151 -3 749 282 11 0 chr20 7744387 7744561 -64409321 - MER5B DNA MER1_type 0 178 3 901 301 102 3 chr20 7745373 7745715 -64408167 + MLT1J2 LTR MaLR 3 378 -72 619 238 144 0 chr20 7745862 7746043 -64407839 + LTR16A1 LTR ERVL 246 452 -5 216 266 31 16 chr20 7746052 7746116 -64407766 + L2 LINE L2 3188 3252 -61 909 184 92 5 chr20 7748590 7748775 -64405107 + MER3 DNA MER1_type 5 205 -4 716 241 47 56 chr20 7748845 7749054 -64404828 + MIR SINE MIR 1 209 -53 2287 95 3 0 chr20 7749054 7749349 -64404533 + AluSp SINE Alu 1 296 -17 716 241 47 56 chr20 7749349 7749371 -64404511 + MIR SINE MIR 209 230 -32 263 316 123 0 chr20 7749555 7749669 -64404213 - L2 LINE L2 -4 3309 3182 1355 216 52 54 chr20 7749670 7750135 -64403747 + MLT1H LTR MaLR 1 549 0 302 224 224 17 chr20 7750212 7750328 -64403554 - L2 LINE L2 -219 3053 2914 1280 283 74 22 chr20 7752011 7752510 -64401372 + L1MC/D LINE L1 5256 5780 -2028 796 206 39 54 chr20 7753338 7753542 -64400340 + MER63A DNA MER1_type 3 203 -7 560 272 0 8 chr20 7753672 7753797 -64400085 + MER5A DNA MER1_type 65 188 -1 218 274 65 0 chr20 7754441 7754503 -64399379 - MIR SINE MIR -111 151 86 272 305 74 11 chr20 7754750 7754845 -64399037 + MIR SINE MIR 13 113 -149 1204 224 56 66 chr20 7754849 7755242 -64398640 - LTR16A1 LTR ERVL 0 457 69 323 284 71 16 chr20 7755298 7755425 -64398457 + MIR SINE MIR 119 252 -10 1226 300 66 24 chr20 7755564 7756461 -64397421 - L2 LINE L2 -2 3311 2379 1940 123 0 27 chr20 7757729 7758052 -64395830 - AluSx SINE Alu 0 315 1 868 168 6 39 chr20 7758559 7758738 -64395144 + MER3 DNA MER1_type 21 193 -16 188 245 0 38 chr20 7759067 7759120 -64394762 + L2 LINE L2 3263 3313 0 473 263 75 64 chr20 7759156 7759583 -64394299 - MLT1H LTR MaLR 0 549 1 1966 176 101 89 chr20 7760106 7760680 -64393202 - L1ME1 LINE L1 -18 6148 5568 1456 275 40 36 chr20 7761110 7761557 -64392325 + LTR16C LTR ERVL 42 490 -1 646 305 64 24 chr20 7762335 7762584 -64391298 - MIR SINE MIR 0 262 4 250 335 151 20 chr20 7762584 7762828 -64391054 - L3 LINE CR1 -109 1468 1192 1394 275 63 24 chr20 7762968 7763598 -64390284 + L1MEc LINE L1 1745 2399 -3997 357 239 0 37 chr20 7766055 7766218 -64387664 + (CATA)n Simple_repeat Simple_repeat 1 157 0 295 322 0 8 chr20 7766249 7766367 -64387515 + (TG)n Simple_repeat Simple_repeat 2 118 0 256 201 14 36 chr20 7766416 7766555 -64387327 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 1907 141 17 3 chr20 7767058 7767356 -64386526 + AluSx SINE Alu 1 302 -10 534 287 78 38 chr20 7767361 7767814 -64386068 - L1MC4a LINE L1 -360 5810 5430 225 316 65 29 chr20 7767967 7768242 -64385640 - L1MC4a LINE L1 -2358 3788 3504 5109 169 28 1 chr20 7768437 7769323 -64384559 + L1MB7 LINE L1 5259 6168 -16 300 283 180 48 chr20 7769346 7769618 -64384264 - L3 LINE CR1 -8 1569 1262 295 264 314 31 chr20 7770227 7770373 -64383509 + MIR SINE MIR 1 197 -65 183 80 0 0 chr20 7770373 7770398 -64383484 + (CA)n Simple_repeat Simple_repeat 1 25 0 295 264 314 31 chr20 7770398 7770410 -64383472 + MIR SINE MIR 197 204 -58 229 287 115 57 chr20 7771038 7771160 -64382722 - L2 LINE L2 0 3313 3185 1536 157 73 31 chr20 7771373 7771657 -64382225 - Charlie5 DNA MER1_type 0 2624 2318 1002 51 5 185 chr20 7771657 7771852 -64382030 + L1MA2 LINE L1 6145 6304 0 1536 157 73 31 chr20 7771852 7771950 -64381932 - Charlie5 DNA MER1_type -306 2318 2226 591 146 0 19 chr20 7771944 7772047 -64381835 - MER3 DNA MER1_type -44 165 65 * 209 280 180 0 chr20 7772062 7772162 -64381720 - L2 LINE L2 -1044 2270 2153 342 115 0 0 chr20 7773519 7773571 -64380311 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 532 298 105 40 chr20 7773592 7773820 -64380062 - MIR SINE MIR -8 254 12 496 306 52 48 chr20 7773826 7774136 -64379746 - L2 LINE L2 -80 3233 2923 326 272 160 18 chr20 7774139 7774308 -64379574 + LTR16A1 LTR ERVL 3 195 -262 527 287 58 17 chr20 7774341 7774515 -64379367 + LTR16A1 LTR ERVL 277 457 0 710 337 100 12 chr20 7774518 7774919 -64378963 - L2 LINE L2 -390 2924 2489 716 186 8 8 chr20 7775029 7775147 -64378735 - FLAM_C SINE Alu -17 126 9 300 111 0 0 chr20 7775853 7775898 -64377984 + (T)n Simple_repeat Simple_repeat 1 45 0 1242 168 0 0 chr20 7777079 7777287 -64376595 - L1 LINE L1 -1147 4999 4792 1853 135 10 3 chr20 7777335 7777631 -64376251 + L1 LINE L1 4457 4754 -1392 289 327 33 42 chr20 7777922 7778136 -64375746 - L2 LINE L2 -1759 1555 1344 923 219 17 22 chr20 7779022 7779200 -64374682 - MER45A DNA AcHobo -1 177 1 590 178 110 0 chr20 7779555 7779673 -64374209 - AluSg/x SINE Alu -14 298 168 1725 128 58 0 chr20 7779567 7779825 -64374057 - AluSx SINE Alu -26 286 14 244 105 0 0 chr20 7779837 7779875 -64374007 - Alu SINE Alu -251 51 14 979 57 0 0 chr20 7780824 7780946 -64372936 - L1PA7 LINE L1 -5 6149 6028 1572 103 9 18 chr20 7780966 7781190 -64372692 - AluSc SINE Alu -7 302 81 673 232 54 21 chr20 7781190 7781431 -64372451 - L1ME2 LINE L1 -264 5900 5652 2901 264 96 10 chr20 7781433 7782364 -64371518 + L2 LINE L2 2043 3052 -261 2528 72 27 0 chr20 7782367 7782702 -64371180 + L1PA10 LINE L1 5821 6164 -4 348 271 62 69 chr20 7783063 7783207 -64370675 + MIR SINE MIR 66 208 -54 203 325 72 0 chr20 7784592 7784675 -64369207 + L3b LINE CR1 1407 1495 -88 639 294 92 27 chr20 7784867 7785204 -64368678 + LTR16C LTR ERVL 133 491 0 648 265 109 17 chr20 7785285 7785337 -64368545 - MIR SINE MIR -10 252 206 192 40 0 0 chr20 7785337 7785362 -64368520 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 299 96 19 0 chr20 7785361 7785413 -64368469 + (TA)n Simple_repeat Simple_repeat 2 54 0 648 265 109 17 chr20 7785362 7785590 -64368292 - MIR SINE MIR -56 206 2 314 360 53 26 chr20 7787420 7787648 -64366234 - L2 LINE L2 -227 3045 2812 1347 254 15 0 chr20 7787800 7788130 -64365752 - LTR16C LTR ERVL 0 491 157 381 207 0 0 chr20 7789072 7789159 -64364723 + (TCCA)n Simple_repeat Simple_repeat 3 89 0 180 205 301 0 chr20 7789159 7789242 -64364640 - L3b LINE CR1 -188 1395 1288 397 220 105 24 chr20 7789463 7789672 -64364210 + L1MC4a LINE L1 4619 4844 -1302 337 298 116 29 chr20 7789862 7790104 -64363778 + L1MC4a LINE L1 5106 5368 -778 435 229 36 21 chr20 7790130 7790270 -64363612 + L1MC4a LINE L1 5409 5550 -2258 460 231 93 0 chr20 7790273 7790381 -64363501 + MER58B DNA MER1_type 1 118 -223 360 94 0 0 chr20 7790381 7790434 -64363448 + (TATTG)n Simple_repeat Simple_repeat 3 55 0 630 204 13 13 chr20 7790435 7790592 -64363290 + L1MA9 LINE L1 6113 6269 -43 899 204 43 0 chr20 7790592 7790803 -64363079 + MER58B DNA MER1_type 109 328 -13 655 243 104 43 chr20 7790823 7791197 -64362685 + L1MC4a LINE L1 5574 5970 -1838 256 306 63 0 chr20 7791475 7791586 -64362296 + L2 LINE L2 3118 3235 -78 292 250 115 8 chr20 7791899 7792096 -64361786 + L1MC4a LINE L1 5692 5752 -432 22 0 0 0 chr20 7792588 7792610 -64361272 + AT_rich Low_complexity Low_complexity 1 22 0 255 93 0 0 chr20 7792973 7793016 -64360866 + (TG)n Simple_repeat Simple_repeat 2 44 0 598 216 157 0 chr20 7793196 7793349 -64360533 - MER5A DNA MER1_type 0 189 13 184 281 18 0 chr20 7793379 7793436 -64360446 - MIR SINE MIR -131 77 20 273 355 60 30 chr20 7793498 7793529 -64360353 - MER5A DNA MER1_type -18 171 142 1620 173 61 4 chr20 7793529 7793687 -64360195 - AluJo SINE Alu -17 295 113 279 0 0 0 chr20 7793687 7793718 -64360164 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1620 173 61 4 chr20 7793718 7793836 -64360046 - AluJo SINE Alu -199 113 3 273 355 60 30 chr20 7793836 7793970 -64359912 - MER5A DNA MER1_type -47 142 1 27 0 0 0 chr20 7794383 7794410 -64359472 + AT_rich Low_complexity Low_complexity 1 27 0 260 172 23 35 chr20 7795641 7795728 -64358154 + (TTA)n Simple_repeat Simple_repeat 2 87 0 229 228 39 94 chr20 7795739 7795866 -64358016 - MIR SINE MIR 0 262 143 287 284 45 0 chr20 7796539 7796627 -64357255 - MER117 DNA MER1_type -105 92 1 1562 219 90 86 chr20 7797115 7797662 -64356220 + MLT1H LTR MaLR 1 549 0 336 214 98 27 chr20 7798144 7798256 -64355626 + MIR3 SINE MIR 82 201 -7 821 276 70 0 chr20 7798278 7798506 -64355376 + MIR SINE MIR 19 262 0 398 276 119 27 chr20 7798783 7799019 -64354863 + MIR SINE MIR 10 262 0 1233 241 103 52 chr20 7799118 7799545 -64354337 + LTR16A1 LTR ERVL 9 457 0 2017 143 20 6 chr20 7800179 7800521 -64353361 + L1PB4 LINE L1 5809 6155 -1 237 309 73 44 chr20 7803022 7803158 -64350724 + L2 LINE L2 2567 2706 -608 1142 252 89 28 chr20 7803294 7803661 -64350221 - L1ME3A LINE L1 -9 6161 5761 1635 203 0 23 chr20 7803661 7803962 -64349920 - AluJb SINE Alu -18 294 1 1142 252 89 28 chr20 7803962 7804031 -64349851 - L1ME3A LINE L1 -409 5761 5698 477 270 52 33 chr20 7804065 7804335 -64349547 + L1M4 LINE L1 5119 5393 -753 302 380 88 15 chr20 7804349 7804554 -64349328 + L2 LINE L2 2872 3091 -181 226 333 0 15 chr20 7804603 7804669 -64349213 + L2 LINE L2 3205 3269 -3 221 0 35 0 chr20 7804892 7804921 -64348961 + (TA)n Simple_repeat Simple_repeat 2 31 0 1047 239 81 32 chr20 7806031 7806462 -64347420 - LTR16A1 LTR ERVL 0 457 6 389 339 131 51 chr20 7806486 7806938 -64346944 - L2 LINE L2 0 3313 2826 7356 91 9 0 chr20 7808538 7810342 -64343540 - L1PA7 LINE L1 -1 6153 4336 2261 114 7 0 chr20 7810850 7811149 -64342733 - AluSx SINE Alu -11 301 1 224 379 9 17 chr20 7811640 7811756 -64342126 + L2 LINE L2 2399 2513 -801 606 243 164 0 chr20 7811768 7811920 -64341962 + MER5A DNA MER1_type 7 183 -6 334 248 139 0 chr20 7811946 7812047 -64341835 + L2 LINE L2 2591 2705 -609 180 111 0 0 chr20 7812047 7812074 -64341808 + (A)n Simple_repeat Simple_repeat 1 27 0 419 337 111 33 chr20 7812172 7812356 -64341526 + L2 LINE L2 2853 3021 -292 1198 183 22 139 chr20 7812356 7812689 -64341193 - MLT1A1 LTR MaLR -2 363 85 2137 126 3 0 chr20 7812689 7812982 -64340900 - AluSx SINE Alu -18 294 1 1198 183 22 139 chr20 7812982 7813059 -64340823 - MLT1A1 LTR MaLR -280 85 1 419 337 111 33 chr20 7813059 7813298 -64340584 + L2 LINE L2 3021 3309 -4 225 94 0 0 chr20 7813366 7813398 -64340484 + (T)n Simple_repeat Simple_repeat 1 32 0 511 233 15 15 chr20 7813796 7813929 -64339953 - MER94 DNA DNA 0 134 2 783 264 16 51 chr20 7813979 7814233 -64339649 + MIR SINE MIR 14 258 -4 23 0 0 0 chr20 7814240 7814263 -64339619 + AT_rich Low_complexity Low_complexity 1 23 0 837 172 0 8 chr20 7814273 7814407 -64339475 - FAM SINE Alu -22 163 31 181 298 46 46 chr20 7814423 7814554 -64339328 - L2 LINE L2 -533 2781 2651 346 345 103 43 chr20 7816511 7816949 -64336933 - L2 LINE L2 -1 3271 2808 528 313 147 11 chr20 7817117 7817382 -64336500 - MLT1K LTR MaLR -187 401 101 353 315 0 0 chr20 7817777 7817888 -64335994 + LTR16A1 LTR ERVL 1 111 -346 * 680 285 30 0 chr20 7817876 7818111 -64335771 + LTR16A1 LTR ERVL 216 457 0 192 135 0 0 chr20 7820674 7820711 -64333171 + (GA)n Simple_repeat Simple_repeat 2 38 0 2028 85 8 0 chr20 7821246 7821623 -64332259 - AluSq SINE Alu 0 401 23 204 200 0 0 chr20 7822242 7822277 -64331605 + (CAG)n Simple_repeat Simple_repeat 2 36 0 288 258 21 21 chr20 7822280 7822377 -64331505 + MER94 DNA DNA 4 100 -34 345 197 0 0 chr20 7822467 7822538 -64331344 + (CA)n Simple_repeat Simple_repeat 1 71 0 3135 145 13 40 chr20 7822559 7822789 -64331093 + L1MA9 LINE L1 5708 5943 -369 2033 148 18 6 chr20 7822789 7823128 -64330754 + MER2 DNA MER2_type 2 344 0 3135 145 13 40 chr20 7823128 7823519 -64330363 + L1MA9 LINE L1 5943 6312 0 199 360 118 7 chr20 7823989 7824142 -64329740 - MIR SINE MIR -85 177 8 472 262 98 13 chr20 7825605 7825950 -64327932 + MLT1J2 LTR MaLR 62 449 -1 1785 203 70 37 chr20 7826355 7826839 -64327043 - MLT1H LTR MaLR -37 512 13 191 312 92 28 chr20 7826976 7827085 -64326797 + MIR SINE MIR 33 148 -60 1146 237 75 25 chr20 7829125 7829606 -64324276 - MER114 LTR ERV 0 648 144 994 251 122 3 chr20 7829615 7829919 -64323963 + MLT1A2 LTR MaLR 1 367 -23 23 54 0 0 chr20 7830068 7830105 -64323777 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr20 7830220 7830251 -64323631 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr20 7830309 7830331 -64323551 + AT_rich Low_complexity Low_complexity 1 22 0 29 101 0 0 chr20 7830355 7830454 -64323428 + AT_rich Low_complexity Low_complexity 1 99 0 27 73 0 0 chr20 7830488 7830543 -64323339 + AT_rich Low_complexity Low_complexity 1 55 0 634 277 113 35 chr20 7830760 7831132 -64322750 + MLT1J2 LTR MaLR 50 450 0 22 56 0 0 chr20 7831330 7831366 -64322516 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr20 7831371 7831392 -64322490 + AT_rich Low_complexity Low_complexity 1 21 0 719 322 38 8 chr20 7831402 7831638 -64322244 - MIR SINE MIR -13 249 7 205 353 35 17 chr20 7831710 7831826 -64322056 - MIR SINE MIR 0 262 145 637 314 67 21 chr20 7833752 7834128 -64319754 - LTR16C LTR ERVL 0 491 99 555 233 259 11 chr20 7834411 7834600 -64319282 - MIR SINE MIR -12 250 15 1180 280 87 3 chr20 7834686 7835043 -64318839 + MLT1F LTR MaLR 1 387 -155 2386 219 68 41 chr20 7835043 7835934 -64317948 + L1ME2 LINE L1 4463 5375 -789 1279 221 13 93 chr20 7835934 7836332 -64317550 + MLT1A2 LTR MaLR 1 366 -8 1183 241 3 18 chr20 7836338 7836666 -64317216 + L1ME2 LINE L1 5369 5691 -473 * 1667 180 21 0 chr20 7836662 7836990 -64316892 + L1PB4 LINE L1 5784 6118 -38 2244 102 0 19 chr20 7836995 7837310 -64316572 + AluSc SINE Alu 1 309 0 1097 246 111 26 chr20 7837382 7837805 -64316077 + L1ME2 LINE L1 5698 6156 -8 2101 94 0 76 chr20 7838380 7838708 -64315174 - AluSq SINE Alu -10 303 1 279 235 0 0 chr20 7838877 7838928 -64314954 + L2 LINE L2 3212 3262 -51 275 234 0 16 chr20 7838945 7839009 -64314873 - MIR SINE MIR -65 143 81 3116 166 9 5 chr20 7839011 7839573 -64314309 + L1MB3 LINE L1 5618 6181 -2 2001 156 77 0 chr20 7839609 7839948 -64313934 + MLT1A1 LTR MaLR 1 365 0 770 172 41 53 chr20 7840175 7840344 -64313538 - MER5B DNA MER1_type -1 177 11 373 315 125 16 chr20 7840542 7840726 -64313156 + MIR SINE MIR 7 210 -52 276 30 0 0 chr20 7840943 7840976 -64312906 + (TG)n Simple_repeat Simple_repeat 1 33 0 483 159 30 76 chr20 7842671 7842803 -64311079 - L1MA9 LINE L1 -104 6208 6083 570 136 29 0 chr20 7842808 7842911 -64310971 + L1MB1 LINE L1 5765 5870 -319 343 201 49 49 chr20 7842942 7843086 -64310796 - L1MC5 LINE L1 -284 7677 7534 233 370 31 24 chr20 7843175 7843302 -64310580 + L2 LINE L2 3186 3313 0 593 129 0 0 chr20 7845427 7845512 -64308370 + L1PB4 LINE L1 6059 6143 -13 191 391 0 22 chr20 7845714 7845804 -64308078 + MIR3 SINE MIR 9 96 -112 269 209 275 0 chr20 7845804 7845895 -64307987 - MER5A DNA MER1_type 0 189 74 239 298 182 0 chr20 7845940 7846061 -64307821 + MIR SINE MIR 88 230 -32 264 303 22 11 chr20 7846102 7846191 -64307691 - MIR3 SINE MIR 0 208 119 26 0 0 0 chr20 7846386 7846412 -64307470 + AT_rich Low_complexity Low_complexity 1 26 0 641 269 13 0 chr20 7847634 7847790 -64306092 + MLT1H LTR MaLR 101 258 -291 223 114 45 0 chr20 7848084 7848128 -64305754 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 238 235 0 0 chr20 7848143 7848194 -64305688 + MLT1H LTR MaLR 485 535 -14 282 299 176 18 chr20 7848567 7848755 -64305127 - MIR SINE MIR -46 216 4 282 56 0 0 chr20 7848773 7848809 -64305073 + (GAA)n Simple_repeat Simple_repeat 2 37 0 182 260 0 20 chr20 7848906 7848956 -64304926 - L2 LINE L2 -10 3262 3214 429 344 71 34 chr20 7849176 7849557 -64304325 + LTR16C LTR ERVL 97 491 0 20147 107 13 13 chr20 7851414 7855235 -64298647 + L1PA7 LINE L1 2325 6154 0 1943 191 19 12 chr20 7855688 7856106 -64297776 - MER61C LTR ERV1 0 434 14 432 285 177 0 chr20 7857915 7858045 -64295837 + MER5A DNA MER1_type 31 183 -6 2034 220 89 55 chr20 7858295 7858926 -64294956 - MLT1E1 LTR MaLR 0 654 3 231 250 15 15 chr20 7858927 7858995 -64294887 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 747 254 61 35 chr20 7859035 7859491 -64294391 + MER113 DNA MER1_type? 2 469 -52 2319 120 28 11 chr20 7860429 7860787 -64293095 - THE1B LTR MaLR 0 364 1 236 231 26 39 chr20 7860983 7861061 -64292821 - MER5A DNA MER1_type -69 120 44 570 231 121 6 chr20 7861425 7861598 -64292284 + MIR SINE MIR 43 235 -27 1839 164 52 3 chr20 7861604 7861952 -64291930 + MLT1A1 LTR MaLR 1 365 0 396 273 105 7 chr20 7862064 7862207 -64291675 - MIR SINE MIR -58 204 48 535 221 74 25 chr20 7862235 7862398 -64291484 + MER69A DNA AcHobo 3 173 -4 835 183 124 0 chr20 7862681 7862867 -64291015 - MER3 DNA MER1_type 0 209 1 933 280 59 55 chr20 7863819 7864256 -64289626 + MLT1J2 LTR MaLR 1 439 -11 1135 232 75 3 chr20 7864256 7864562 -64289320 + MLT1H LTR MaLR 1 328 -221 360 226 32 97 chr20 7864596 7864720 -64289162 + MLT1H LTR MaLR 454 547 -2 396 0 0 0 chr20 7864880 7864924 -64288958 + (CA)n Simple_repeat Simple_repeat 1 44 0 378 310 35 62 chr20 7865307 7865597 -64288285 + LTR16C LTR ERVL 138 419 -72 251 264 153 0 chr20 7865898 7865970 -64287912 - L2 LINE L2 -1 3312 3230 269 254 64 0 chr20 7866906 7867016 -64286866 + MER113 DNA MER1_type? 93 209 -312 1651 203 10 0 chr20 7867862 7868163 -64285719 + AluJo SINE Alu 3 306 -6 455 287 76 32 chr20 7868692 7868849 -64285033 - MER5A DNA MER1_type 0 189 26 2560 157 15 18 chr20 7869283 7869741 -64284141 + MER66B LTR ERV1 1 457 -29 1523 168 3 61 chr20 7870092 7870419 -64283463 + AluJb SINE Alu 3 310 -2 186 167 0 0 chr20 7870419 7870455 -64283427 + GA-rich Low_complexity Low_complexity 1 36 0 300 311 89 7 chr20 7870481 7870616 -64283266 + MIR3 SINE MIR 52 197 -11 425 343 24 12 chr20 7870719 7870885 -64282997 - MIR3 SINE MIR -18 190 23 1270 271 64 8 chr20 7871213 7871601 -64282281 + LTR16C LTR ERVL 79 488 -3 788 255 45 15 chr20 7871693 7871960 -64281922 - LTR16C LTR ERVL -8 483 209 200 200 0 0 chr20 7872734 7872769 -64281113 + A-rich Low_complexity Low_complexity 3 37 0 306 297 44 0 chr20 7874407 7874498 -64279384 - L2 LINE L2 -5 3308 3214 211 158 26 0 chr20 7875295 7875333 -64278549 + GA-rich Low_complexity Low_complexity 2 40 0 739 247 156 37 chr20 7875554 7875906 -64277976 + LTR16C LTR ERVL 97 490 -1 6431 179 38 42 chr20 7876512 7876659 -64277223 - L1MA9 LINE L1 0 7272 7126 306 0 0 0 chr20 7876659 7876693 -64277189 + (TG)n Simple_repeat Simple_repeat 1 34 0 6431 179 38 42 chr20 7876693 7878563 -64275319 - L1MA9 LINE L1 -146 7126 5249 1406 233 37 3 chr20 7878563 7878859 -64275023 + AluJo SINE Alu 1 306 -6 6431 179 38 42 chr20 7878859 7879102 -64274780 - L1MA9 LINE L1 -2023 5249 5006 813 178 0 20 chr20 7879102 7879248 -64274634 - FLAM_C SINE Alu 0 143 1 6431 179 38 42 chr20 7879248 7879515 -64274367 - L1MA9 LINE L1 -2266 5006 4695 1344 218 194 17 chr20 7879507 7879925 -64273957 - L1MA9 LINE L1 -6538 492 1 * 371 192 154 58 chr20 7879934 7879984 -64273898 - MIR SINE MIR -112 150 106 2271 181 43 0 chr20 7879984 7880398 -64273484 - MSTB1 LTR MaLR 0 432 1 371 192 154 58 chr20 7880398 7880451 -64273431 - MIR SINE MIR -156 106 37 194 79 0 26 chr20 7881297 7881335 -64272547 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 333 327 46 0 chr20 7882965 7883118 -64270764 - MIR SINE MIR -37 225 66 280 278 14 0 chr20 7883233 7883305 -64270577 + MER116 DNA Mariner 3 75 -5 735 203 31 78 chr20 7883887 7884079 -64269803 - MER5A DNA MER1_type 0 189 7 309 325 170 10 chr20 7884300 7884494 -64269388 - MIR SINE MIR -1 261 37 800 256 118 44 chr20 7885535 7885941 -64267941 + L1MC4a LINE L1 5595 6030 -1778 539 328 124 47 chr20 7886525 7886764 -64267118 + L2 LINE L2 1978 2197 -1075 1783 168 25 0 chr20 7886764 7887050 -64266832 - AluJo SINE Alu -19 293 1 539 328 124 47 chr20 7887050 7887192 -64266690 + L2 LINE L2 2197 2327 -945 2335 94 0 3 chr20 7887192 7887489 -64266393 - AluSg SINE Alu -12 298 3 2364 75 13 41 chr20 7887499 7887817 -64266065 - AluY SINE Alu -2 309 1 539 328 124 47 chr20 7887817 7888015 -64265867 + L2 LINE L2 2335 2516 -756 2133 133 6 35 chr20 7888015 7888362 -64265520 - MER1B DNA MER1_type 0 337 1 539 328 124 47 chr20 7888362 7888805 -64265077 + L2 LINE L2 2516 3079 -193 1560 179 105 30 chr20 7890268 7890631 -64263251 + L1MC4 LINE L1 7502 7891 -151 250 115 19 0 chr20 7890634 7890686 -64263196 - LTR66 LTR ERVL -164 446 394 242 232 0 0 chr20 7890710 7890766 -64263116 - L1MC4 LINE L1 -1339 6703 6648 401 198 75 56 chr20 7890766 7890913 -64262969 + L1MC4 LINE L1 7901 8038 -4 363 289 164 13 chr20 7891716 7891868 -64262014 - MIR3 SINE MIR -24 184 10 633 245 88 60 chr20 7892652 7892981 -64260901 + L1ME4a LINE L1 5284 5621 -590 2241 109 3 0 chr20 7893169 7893472 -64260410 - AluSq SINE Alu -9 304 1 2120 129 10 0 chr20 7893795 7894105 -64259777 - AluSq SINE Alu 0 313 1 317 251 77 115 chr20 7894174 7894539 -64259343 + L1ME4a LINE L1 5665 6017 -104 2232 227 18 4 chr20 7894728 7895178 -64258704 - LTR16C LTR ERVL 0 491 36 2406 80 0 0 chr20 7895595 7895883 -64257999 - AluSg SINE Alu -22 288 1 607 266 83 87 chr20 7896287 7896681 -64257201 + LTR33 LTR ERVL 17 411 -110 2119 113 3 0 chr20 7896681 7896996 -64256886 - AluSx SINE Alu 0 316 1 607 266 83 87 chr20 7896996 7897107 -64256775 + LTR33 LTR ERVL 411 521 0 306 206 0 0 chr20 7900286 7900354 -64253528 + CT-rich Low_complexity Low_complexity 1 68 0 1464 219 36 15 chr20 7900548 7900881 -64253001 + MER58B DNA MER1_type 2 341 0 273 243 40 0 chr20 7900898 7900972 -64252910 + MIR SINE MIR 63 139 -123 464 275 95 11 chr20 7901694 7901883 -64251999 + MIR SINE MIR 26 230 -32 2161 225 62 60 chr20 7902231 7902418 -64251464 - L1ME3A LINE L1 -5 6165 5980 351 0 0 0 chr20 7902418 7902457 -64251425 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2161 225 62 60 chr20 7902457 7902469 -64251413 - L1ME3A LINE L1 -190 5980 5970 1922 133 4 0 chr20 7902469 7902740 -64251142 - AluSq SINE Alu -41 272 1 2161 225 62 60 chr20 7902740 7903251 -64250631 - L1ME3A LINE L1 -200 5970 5453 255 342 13 0 chr20 7904171 7904247 -64249635 - MIR SINE MIR 0 262 186 1800 131 0 0 chr20 7905151 7905425 -64248457 + L1MA5 LINE L1 6025 6298 -2 279 247 10 41 chr20 7905815 7905912 -64247970 + L2 LINE L2 3220 3313 0 3358 177 58 31 chr20 7906946 7907664 -64246218 - L1MA9 LINE L1 -30 6282 5545 231 170 0 0 chr20 7908099 7908146 -64245736 + T-rich Low_complexity Low_complexity 1 47 0 423 289 34 82 chr20 7908381 7908672 -64245210 - L3 LINE CR1 -702 875 599 213 39 0 0 chr20 7908988 7909014 -64244868 + (T)n Simple_repeat Simple_repeat 1 26 0 1432 147 9 5 chr20 7909029 7909253 -64244629 - AluSq SINE Alu -88 225 1 2912 226 35 4 chr20 7910015 7910693 -64243189 + L1MC4a LINE L1 7109 7807 -1 202 323 0 32 chr20 7910798 7910860 -64243022 + L3 LINE CR1 1516 1575 -2 189 262 0 0 chr20 7911611 7911653 -64242229 + MIR3 SINE MIR 118 159 -49 1756 225 47 21 chr20 7911653 7912124 -64241758 - Charlie4a DNA MER1_type -1 507 25 927 249 21 0 chr20 7914638 7914827 -64239055 + MER58A DNA MER1_type 32 224 0 1859 222 66 2 chr20 7914827 7915359 -64238523 - L1M4 LINE L1 -1566 4580 4015 3087 203 11 15 chr20 7915603 7916238 -64237644 + L1ME2 LINE L1 5541 6334 0 432 121 0 0 chr20 7916246 7916312 -64237570 + Alu SINE Alu 244 309 -2 817 272 71 5 chr20 7918443 7918667 -64235215 - MIR SINE MIR -21 241 3 861 198 51 0 chr20 7918829 7919006 -64234876 - MER3 DNA MER1_type -18 191 6 581 269 154 0 chr20 7919025 7919181 -64234701 + MER5A DNA MER1_type 9 188 -1 376 360 80 6 chr20 7919473 7919648 -64234234 + MIR3 SINE MIR 16 203 -5 1192 179 37 172 chr20 7919857 7920322 -64233560 + MLT1H LTR MaLR 2 403 -146 482 274 110 0 chr20 7920478 7920642 -64233240 - MIR SINE MIR -47 215 34 2138 121 0 25 chr20 7920646 7920961 -64232921 - AluSx SINE Alu -4 308 2 321 362 40 7 chr20 7921050 7921202 -64232680 + MIR3 SINE MIR 49 205 -3 2319 108 3 16 chr20 7921217 7921533 -64232349 + AluSx SINE Alu 1 312 0 797 308 54 0 chr20 7921983 7922259 -64231623 + LTR16A LTR ERVL 1 291 -159 218 292 31 0 chr20 7922456 7922521 -64231361 + GA-rich Low_complexity Low_complexity 3 69 0 903 88 16 39 chr20 7922522 7922704 -64231178 + (GGGAA)n Simple_repeat Simple_repeat 3 180 0 194 203 0 102 chr20 7923125 7923184 -64230698 - MIR SINE MIR -62 200 148 277 222 19 0 chr20 7923237 7923291 -64230591 + MLT1I LTR MaLR 81 135 -274 518 312 32 0 chr20 7923559 7923716 -64230166 - MIR SINE MIR -98 164 3 221 340 27 41 chr20 7925882 7926029 -64227853 - L2 LINE L2 -614 2700 2556 214 318 68 38 chr20 7926099 7926231 -64227651 - L2 LINE L2 -871 2443 2308 203 310 40 80 chr20 7926508 7926708 -64227174 + L2 LINE L2 2230 2421 -893 2821 95 14 0 chr20 7926790 7927149 -64226733 - THE1B LTR MaLR 0 364 1 187 281 45 34 chr20 7927566 7927655 -64226227 + MIR SINE MIR 112 201 -61 258 32 0 0 chr20 7928360 7928391 -64225491 + (CA)n Simple_repeat Simple_repeat 1 31 0 264 297 79 0 chr20 7928469 7928570 -64225312 + MIR SINE MIR 36 144 -118 419 256 61 72 chr20 7928575 7928755 -64225127 + MER5A DNA MER1_type 11 188 -1 703 299 103 0 chr20 7929632 7929846 -64224036 + MIR SINE MIR 27 262 0 196 237 0 0 chr20 7930274 7930312 -64223570 + L2 LINE L2 3262 3299 -14 301 281 236 15 chr20 7931998 7932224 -64221658 + L3b LINE CR1 1183 1455 -128 408 20 0 0 chr20 7933977 7934026 -64219856 + (TG)n Simple_repeat Simple_repeat 2 50 0 25 51 0 0 chr20 7935063 7935102 -64218780 + AT_rich Low_complexity Low_complexity 1 39 0 1336 259 134 34 chr20 7935182 7935750 -64218132 - L1MC4 LINE L1 -143 7899 7257 2130 136 0 0 chr20 7935750 7936052 -64217830 - AluSx SINE Alu -10 302 1 1336 259 134 34 chr20 7936052 7936131 -64217751 - L1MC4 LINE L1 -785 7257 7187 202 281 37 12 chr20 7937400 7937482 -64216400 - MIR3 SINE MIR -11 197 114 24 32 0 0 chr20 7937497 7937528 -64216354 + AT_rich Low_complexity Low_complexity 1 31 0 323 330 0 0 chr20 7937530 7937621 -64216261 - L2 LINE L2 -4 3268 3178 1379 157 32 98 chr20 7937719 7938128 -64215754 - Charlie5 DNA MER1_type 0 2618 2237 619 170 0 9 chr20 7938132 7938244 -64215638 - MER3 DNA MER1_type -42 167 57 203 326 27 54 chr20 7938315 7938462 -64215420 - MIR3 SINE MIR -61 147 5 1076 276 87 43 chr20 7939830 7940315 -64213567 + MLT1H LTR MaLR 44 549 0 1434 110 14 23 chr20 7940662 7940880 -64213002 + AluSg/x SINE Alu 96 311 -1 470 194 0 43 chr20 7942294 7942531 -64211351 + (CA)n Simple_repeat Simple_repeat 1 226 0 24 32 0 0 chr20 7943019 7943050 -64210832 + AT_rich Low_complexity Low_complexity 1 31 0 2015 166 0 3 chr20 7943215 7943528 -64210354 - AluSx SINE Alu 0 312 1 336 209 72 58 chr20 7943564 7943703 -64210179 + L1MC5 LINE L1 7630 7770 -191 1876 178 0 7 chr20 7943887 7944196 -64209686 + AluJb SINE Alu 1 307 -5 24 0 0 0 chr20 7945994 7946018 -64207864 + AT_rich Low_complexity Low_complexity 1 24 0 504 356 21 13 chr20 7947858 7948172 -64205710 + Charlie8 DNA MER1_type 9 309 -2108 253 224 90 0 chr20 7948204 7948271 -64205611 + MLT1J1 LTR MaLR 3 75 -371 1652 166 0 7 chr20 7948272 7948682 -64205200 + L1MB3 LINE L1 5682 6178 -5 510 279 191 24 chr20 7948697 7948991 -64204891 + MLT1J1 LTR MaLR 96 438 -8 1646 79 9 0 chr20 7949324 7949538 -64204344 - MSTA LTR MaLR -1 427 212 1756 144 7 4 chr20 7949540 7949810 -64204072 + AluSx SINE Alu 41 311 -1 354 138 0 0 chr20 7949810 7949868 -64204014 + (GA)n Simple_repeat Simple_repeat 1 58 0 1300 54 0 22 chr20 7949868 7950052 -64203830 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1377 138 9 9 chr20 7950053 7950278 -64203604 - MSTA LTR MaLR -198 230 6 223 335 87 29 chr20 7950450 7950623 -64203259 - MIR SINE MIR -13 249 67 1531 207 65 70 chr20 7950712 7951252 -64202630 - MLT1H LTR MaLR 0 549 13 240 345 0 0 chr20 7951273 7951386 -64202496 - HAL1 LINE L1 -145 2362 2250 939 151 138 26 chr20 7951409 7951641 -64202241 - L1MC4 LINE L1 -48 7994 7737 668 236 152 0 chr20 7951646 7951824 -64202058 - MER3 DNA MER1_type -4 205 1 2701 113 20 29 chr20 7951927 7952329 -64201553 - LTR56 LTR ERV1 -6 439 40 1852 155 7 14 chr20 7952329 7952619 -64201263 + AluSx SINE Alu 1 288 -24 2701 113 20 29 chr20 7952619 7952658 -64201224 - LTR56 LTR ERV1 -405 40 2 648 222 17 43 chr20 7952767 7952997 -64200885 - LTR56-int LTR ERV1 -330 4793 4570 1046 261 40 4 chr20 7953138 7953410 -64200472 - LTR16A1 LTR ERVL 0 457 176 1734 228 85 56 chr20 7954393 7954960 -64198922 + MLT1G1 LTR MaLR 1 583 -12 935 192 10 61 chr20 7955715 7955792 -64198090 + MER5A DNA MER1_type 1 80 -109 1788 148 30 27 chr20 7955792 7956089 -64197793 + AluJo SINE Alu 1 298 -14 935 192 10 61 chr20 7956089 7956209 -64197673 + MER5A DNA MER1_type 80 188 -1 1255 242 234 25 chr20 7956225 7956857 -64197025 - LTR50 LTR ERVL -29 766 3 496 290 64 60 chr20 7958506 7958784 -64195098 + L1M4 LINE L1 4392 4674 -1472 2051 146 3 0 chr20 7958784 7959086 -64194796 + AluSx SINE Alu 1 303 -9 496 290 64 60 chr20 7959086 7959259 -64194623 + L1M4 LINE L1 4674 4845 -1301 378 323 81 16 chr20 7959420 7959475 -64194407 + L1M4 LINE L1 5052 5102 -1044 234 91 0 0 chr20 7959475 7959508 -64194374 + (CA)n Simple_repeat Simple_repeat 2 34 0 378 323 81 16 chr20 7959508 7959762 -64194120 + L1M4 LINE L1 5102 5381 -765 273 246 57 41 chr20 7959893 7960015 -64193867 + L1M4 LINE L1 5531 5654 -520 2432 93 0 6 chr20 7961515 7961827 -64192055 + AluSx SINE Alu 1 310 -2 180 0 0 0 chr20 7962582 7962602 -64191280 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr20 7963298 7963326 -64190556 + AT_rich Low_complexity Low_complexity 1 28 0 575 231 43 32 chr20 7963632 7963818 -64190064 + MER5A DNA MER1_type 1 188 -1 752 220 13 93 chr20 7964810 7965051 -64188831 - MIR SINE MIR -11 251 21 810 168 74 7 chr20 7965398 7965547 -64188335 + MER5B DNA MER1_type 10 168 -10 1859 226 91 34 chr20 7967044 7967628 -64186254 + L1ME2 LINE L1 5528 6144 -20 365 252 189 8 chr20 7968094 7968221 -64185661 + MER5A DNA MER1_type 34 183 -6 389 219 76 17 chr20 7968406 7968525 -64185357 + MIR SINE MIR 107 232 -30 714 219 69 0 chr20 7968752 7968912 -64184970 + MER5A DNA MER1_type 1 171 -18 202 288 0 0 chr20 7969173 7969232 -64184650 - L2 LINE L2 -4 3309 3251 636 306 124 14 chr20 7970218 7970493 -64183389 - MLT1H LTR MaLR -13 536 232 420 237 170 7 chr20 7971152 7971287 -64182595 - MER5A DNA MER1_type -7 182 26 734 291 101 78 chr20 7971597 7972028 -64181854 - L3 LINE CR1 -33 1544 1124 2355 94 3 3 chr20 7972028 7972325 -64181557 + AluSg SINE Alu 1 297 -13 2845 124 42 31 chr20 7972334 7972857 -64181025 + L1MB2 LINE L1 5642 6170 -1 734 291 101 78 chr20 7972857 7973072 -64180810 - L3 LINE CR1 -460 1117 873 2460 61 13 16 chr20 7975004 7975315 -64178567 - AluSp SINE Alu -3 310 1 1923 138 28 7 chr20 7975556 7975847 -64178035 + AluSx SINE Alu 1 297 -15 1030 197 56 66 chr20 7976024 7976344 -64177538 - L1ME2 LINE L1 -24 6140 5824 2423 82 0 0 chr20 7977374 7977677 -64176205 - AluSc SINE Alu -6 303 1 306 277 0 11 chr20 7979902 7979996 -64173886 + (CGG)n Simple_repeat Simple_repeat 3 95 0 369 0 0 0 chr20 7983943 7983984 -64169898 + (T)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr20 7985415 7985439 -64168443 + (T)n Simple_repeat Simple_repeat 1 24 0 351 0 0 0 chr20 7989119 7989158 -64164724 + (TG)n Simple_repeat Simple_repeat 2 40 0 686 340 65 39 chr20 7991433 7992128 -64161754 + L2 LINE L2 2286 2997 -275 252 0 0 0 chr20 7993944 7993972 -64159910 + (A)n Simple_repeat Simple_repeat 1 28 0 409 327 125 11 chr20 7994123 7994395 -64159487 + L1ME3A LINE L1 5254 5556 -2252 1191 207 212 16 chr20 7995210 7995592 -64158290 + LTR16A1 LTR ERVL 1 457 0 1552 168 54 7 chr20 7996152 7996449 -64157433 - AluJo SINE Alu -1 311 1 207 0 0 0 chr20 7996636 7996659 -64157223 + (T)n Simple_repeat Simple_repeat 1 23 0 385 206 23 6 chr20 7998019 7998114 -64155768 - MER5A DNA MER1_type -80 109 1 401 307 123 0 chr20 7998127 7998290 -64155592 + MER5A DNA MER1_type 6 188 -1 272 285 190 15 chr20 8002366 8002503 -64151379 - MER5B DNA MER1_type -17 161 1 251 342 107 20 chr20 8002520 8002716 -64151166 + MIR SINE MIR 14 226 -36 726 191 143 42 chr20 8005860 8006049 -64147833 + MER3 DNA MER1_type 1 208 -1 2018 78 3 72 chr20 8006690 8007010 -64146872 - AluSp SINE Alu -14 299 2 351 0 0 0 chr20 8009216 8009255 -64144627 + (TG)n Simple_repeat Simple_repeat 1 39 0 254 206 255 29 chr20 8009255 8009349 -64144533 + MER5A DNA MER1_type 37 157 -32 * 528 138 32 0 chr20 8009288 8009382 -64144500 - MER5A DNA MER1_type -83 106 10 932 135 65 18 chr20 8009409 8009579 -64144303 + MER5B DNA MER1_type 1 178 0 1163 194 24 0 chr20 8010444 8010650 -64143232 + MER58A DNA MER1_type 6 216 -8 367 192 323 6 chr20 8010704 8010871 -64143011 + L1ME3A LINE L1 5943 6162 -8 279 259 49 0 chr20 8011237 8011318 -64142564 - MLT1G1 LTR MaLR -18 577 493 255 222 61 50 chr20 8011424 8011523 -64142359 - MLT1I LTR MaLR -263 146 47 24 32 0 0 chr20 8014501 8014532 -64139350 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr20 8015508 8015545 -64138337 + AT_rich Low_complexity Low_complexity 1 37 0 286 309 29 73 chr20 8017561 8017697 -64136185 + MER5A DNA MER1_type 59 188 -1 610 293 22 17 chr20 8019290 8019471 -64134411 - MIR3 SINE MIR -10 198 17 267 286 0 0 chr20 8020736 8020799 -64133083 + MIR SINE MIR 9 71 -191 390 254 95 32 chr20 8020837 8020963 -64132919 + MIR SINE MIR 19 152 -110 2172 195 114 56 chr20 8021154 8021743 -64132139 + MLT1E3 LTR MaLR 2 624 0 258 95 0 0 chr20 8023332 8023374 -64130508 + (TG)n Simple_repeat Simple_repeat 2 43 0 309 285 250 21 chr20 8024430 8024574 -64129308 - MER5B DNA MER1_type 0 178 2 363 295 16 33 chr20 8024667 8024789 -64129093 - MIR SINE MIR -64 144 25 2284 55 3 61 chr20 8027199 8027525 -64126357 + AluY SINE Alu 1 307 -4 334 219 372 0 chr20 8029559 8029696 -64124186 - MER5A DNA MER1_type 0 189 2 189 260 115 31 chr20 8031899 8031995 -64121887 - MIR SINE MIR -59 203 100 2343 61 0 7 chr20 8032677 8032974 -64120908 + AluY SINE Alu 1 295 -16 23 0 0 0 chr20 8034075 8034098 -64119784 + AT_rich Low_complexity Low_complexity 1 23 0 357 125 0 0 chr20 8034298 8034354 -64119528 + (A)n Simple_repeat Simple_repeat 1 56 0 2019 147 40 0 chr20 8035591 8035917 -64117965 + AluJo SINE Alu 1 338 0 426 294 37 7 chr20 8036155 8036291 -64117591 - MER5A DNA MER1_type -22 167 28 338 240 100 33 chr20 8036362 8036512 -64117370 + MER5A DNA MER1_type 7 166 -23 1365 272 155 42 chr20 8036638 8037097 -64116785 - L2 LINE L2 -90 3223 2818 389 36 0 18 chr20 8037097 8037153 -64116729 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1365 272 155 42 chr20 8037153 8037508 -64116374 - L2 LINE L2 -495 2818 2505 1373 172 50 88 chr20 8037508 8037885 -64115997 + MLT1A1 LTR MaLR 1 363 -2 1365 272 155 42 chr20 8037885 8038338 -64115544 - L2 LINE L2 -808 2505 1826 977 216 86 27 chr20 8038392 8038693 -64115189 - MER33 DNA MER1_type -5 319 1 241 158 0 53 chr20 8038693 8038750 -64115132 - L2 LINE L2 -1516 1798 1745 25 0 0 28 chr20 8040668 8040692 -64113190 + AT_rich Low_complexity Low_complexity 1 25 -10 2007 115 21 0 chr20 8040692 8040971 -64112911 + AluSp SINE Alu 1 285 -28 25 0 0 28 chr20 8040971 8040982 -64112900 + AT_rich Low_complexity Low_complexity 25 35 0 306 305 25 8 chr20 8041657 8041775 -64112107 + MIR SINE MIR 41 160 -102 788 264 94 8 chr20 8041998 8042252 -64111630 + MLT1K LTR MaLR 313 588 0 227 209 113 17 chr20 8042965 8043080 -64110802 - MIR SINE MIR -116 146 21 201 74 0 0 chr20 8044431 8044458 -64109424 + (TCC)n Simple_repeat Simple_repeat 2 28 0 1916 75 0 36 chr20 8044838 8045090 -64108792 - AluY SINE Alu -10 301 59 2003 147 40 0 chr20 8095938 8096265 -64057617 + AluJo SINE Alu 1 339 0 493 287 37 7 chr20 8096503 8096639 -64057243 - MER5A DNA MER1_type -22 167 28 387 240 100 33 chr20 8096710 8096860 -64057022 + MER5A DNA MER1_type 7 166 -23 1608 269 152 47 chr20 8096986 8097445 -64056437 - L2 LINE L2 -90 3223 2814 396 0 0 0 chr20 8097445 8097489 -64056393 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1608 269 152 47 chr20 8097489 8097855 -64056027 - L2 LINE L2 -499 2814 2488 1485 172 50 88 chr20 8097855 8098232 -64055650 + MLT1A1 LTR MaLR 1 363 -2 1608 269 152 47 chr20 8098232 8098685 -64055197 - L2 LINE L2 -825 2488 1826 999 216 86 27 chr20 8098739 8099040 -64054842 - MER33 DNA MER1_type -5 319 1 258 158 0 53 chr20 8099040 8099097 -64054785 - L2 LINE L2 -1516 1798 1745 24 0 0 0 chr20 8101016 8101040 -64052842 + AT_rich Low_complexity Low_complexity 1 24 0 1683 114 25 0 chr20 8101040 8101276 -64052606 + AluSx SINE Alu 1 242 -70 265 286 0 0 chr20 8101699 8101762 -64052120 + MIR SINE MIR 9 71 -191 385 254 95 32 chr20 8101800 8101926 -64051956 + MIR SINE MIR 19 152 -110 2374 194 114 56 chr20 8102117 8102706 -64051176 + MLT1E3 LTR MaLR 2 624 0 258 95 0 0 chr20 8104295 8104337 -64049545 + (TG)n Simple_repeat Simple_repeat 2 43 0 295 285 250 21 chr20 8105393 8105537 -64048345 - MER5B DNA MER1_type 0 178 2 355 295 16 33 chr20 8105630 8105752 -64048130 - MIR SINE MIR -64 144 25 2313 61 3 67 chr20 8108047 8108374 -64045508 + AluY SINE Alu 1 306 -5 323 234 372 0 chr20 8110408 8110545 -64043337 - MER5A DNA MER1_type 0 189 2 2449 61 0 7 chr20 8113525 8113822 -64040060 + AluY SINE Alu 1 295 -16 23 0 0 0 chr20 8114923 8114946 -64038936 + AT_rich Low_complexity Low_complexity 1 23 0 357 125 0 0 chr20 8115146 8115202 -64038680 + (A)n Simple_repeat Simple_repeat 1 56 0 348 298 33 33 chr20 8116121 8116272 -64037610 + MIR SINE MIR 10 160 -102 786 264 94 8 chr20 8116495 8116749 -64037133 + MLT1K LTR MaLR 313 588 0 266 209 113 17 chr20 8117465 8117580 -64036302 - MIR SINE MIR -116 146 21 201 74 0 0 chr20 8118931 8118958 -64034924 + (TCC)n Simple_repeat Simple_repeat 2 28 0 184 420 0 0 chr20 8119021 8119102 -64034780 + MIR SINE MIR 65 145 -117 2430 68 0 29 chr20 8119338 8119648 -64034234 - AluY SINE Alu -10 301 1 205 358 11 62 chr20 8119648 8119827 -64034055 - MIR SINE MIR -46 216 47 278 366 45 0 chr20 8122638 8122750 -64031132 + L2 LINE L2 3147 3263 -9 23 0 0 0 chr20 8122902 8122925 -64030957 + AT_rich Low_complexity Low_complexity 1 23 0 390 127 0 0 chr20 8125680 8125751 -64028131 + (GA)n Simple_repeat Simple_repeat 2 72 0 26 0 0 0 chr20 8128201 8128227 -64025655 + AT_rich Low_complexity Low_complexity 1 26 0 1444 146 158 23 chr20 8128335 8128595 -64025287 + AluJo SINE Alu 1 295 -7 243 372 0 0 chr20 8129390 8129468 -64024414 + L2 LINE L2 3230 3307 -6 2063 118 18 0 chr20 8129468 8129748 -64024134 + AluSx SINE Alu 1 285 -27 1012 263 226 5 chr20 8130140 8130517 -64023365 + L1ME3A LINE L1 5454 5913 -257 1855 139 10 20 chr20 8131504 8131798 -64022084 + AluJo SINE Alu 1 291 -21 547 276 162 42 chr20 8133817 8134273 -64019609 - L1MC4 LINE L1 -7 8035 7525 1756 179 7 3 chr20 8134288 8134579 -64019303 - AluJo SINE Alu -20 292 1 2404 91 3 3 chr20 8135100 8135409 -64018473 + AluSc SINE Alu 1 309 0 468 296 125 19 chr20 8136840 8136855 -64017027 - L3b LINE CR1 -208 1375 1363 648 276 167 14 chr20 8136855 8137148 -64016734 - MER102b DNA MER1_type -2 339 2 468 296 125 19 chr20 8137148 8137348 -64016534 - L3b LINE CR1 -220 1363 1137 2092 119 3 3 chr20 8137371 8137697 -64016185 + AluSx SINE Alu 1 326 0 261 245 0 0 chr20 8137911 8137960 -64015922 - L2 LINE L2 0 3313 3265 328 278 90 39 chr20 8138092 8138347 -64015535 - L1ME4a LINE L1 0 6121 5854 364 260 67 83 chr20 8138515 8138827 -64015055 - L1ME4a LINE L1 -1375 4771 4465 2865 155 33 62 chr20 8138934 8140438 -64013444 - L1MA9 LINE L1 0 6312 4733 1048 290 142 35 chr20 8140412 8141320 -64012562 - L1ME4a LINE L1 -1856 4290 3286 * 1229 232 64 48 chr20 8141449 8141841 -64012041 + MER93a LTR ERV1 5 402 0 2298 109 0 25 chr20 8142141 8142461 -64011421 + AluSx SINE Alu 1 312 0 243 19 113 38 chr20 8142461 8142514 -64011368 + GA-rich Low_complexity Low_complexity 4 60 0 180 200 0 0 chr20 8142517 8142552 -64011330 - L2 LINE L2 -1039 2275 2241 259 267 114 69 chr20 8143350 8143498 -64010384 - MER5A DNA MER1_type -25 153 1 1258 235 74 70 chr20 8144411 8145044 -64008838 + L1MC5 LINE L1 7320 7955 -6 1606 139 12 36 chr20 8146146 8146398 -64007484 - AluJo SINE Alu -66 246 1 4870 161 31 19 chr20 8148226 8148306 -64005576 + L1MB8 LINE L1 4730 4808 -1370 2349 93 7 0 chr20 8148306 8148616 -64005266 + AluSx SINE Alu 1 312 0 4870 161 31 19 chr20 8148616 8149971 -64003911 + L1MB8 LINE L1 4808 6178 0 1620 189 3 18 chr20 8150311 8150597 -64003285 - AluJo SINE Alu -30 282 1 221 240 13 27 chr20 8151267 8151342 -64002540 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2178 112 17 0 chr20 8153059 8153346 -64000536 + AluSp SINE Alu 1 292 -21 247 183 104 78 chr20 8155750 8155865 -63998017 + MIR SINE MIR 22 139 -123 188 241 170 92 chr20 8156296 8156590 -63997292 - L2 LINE L2 -42 3230 2914 1730 182 0 10 chr20 8156899 8157190 -63996692 + AluJb SINE Alu 1 288 -24 2346 99 3 0 chr20 8157203 8157506 -63996376 + AluSq SINE Alu 1 304 -9 1813 152 53 70 chr20 8158033 8158535 -63995347 + MLT1B LTR MaLR 1 467 0 2175 83 73 7 chr20 8158567 8158856 -63995026 + AluSq SINE Alu 1 308 -5 284 306 102 25 chr20 8158889 8159085 -63994797 + HERV16 LTR ERVL 1729 1939 -3057 1095 366 60 8 chr20 8159158 8159907 -63993975 + HERV16 LTR ERVL 2092 2879 -2885 1446 298 97 30 chr20 8160181 8160408 -63993474 + HERV16 LTR ERVL 3776 3986 -1668 1156 195 75 101 chr20 8160408 8160783 -63993099 - MLT1A1 LTR MaLR 0 365 1 1446 298 97 30 chr20 8160783 8161517 -63992365 + HERV16 LTR ERVL 3986 4785 -869 252 0 0 0 chr20 8161720 8161748 -63992134 + (A)n Simple_repeat Simple_repeat 1 28 0 431 286 133 5 chr20 8161772 8161975 -63991907 + HERV16 LTR ERVL 5152 5380 -384 385 311 6 37 chr20 8162322 8162483 -63991399 + LTR67 LTR ERVL 2 157 -400 466 191 32 0 chr20 8162663 8162757 -63991125 + LTR67 LTR ERVL 419 515 -42 250 244 0 0 chr20 8163105 8163179 -63990703 + L1MC/D LINE L1 5444 5517 -2291 24 0 0 0 chr20 8163426 8163450 -63990432 + AT_rich Low_complexity Low_complexity 1 24 0 4707 146 20 20 chr20 8164062 8165322 -63988560 + L1MA5 LINE L1 4589 5844 -456 4191 165 33 37 chr20 8165322 8166110 -63987772 + LTR1 LTR ERV1 1 785 0 4707 146 20 20 chr20 8166110 8166161 -63987721 + L1MA5 LINE L1 5844 5894 -406 2066 135 45 6 chr20 8166143 8166476 -63987406 + L1PB1 LINE L1 5768 6113 -38 * 2049 156 48 23 chr20 8166544 8166941 -63986941 + L1MA5 LINE L1 5894 6300 0 293 250 26 0 chr20 8167535 8167611 -63986271 + MIR SINE MIR 77 154 -108 338 222 131 0 chr20 8167908 8168007 -63985875 - Charlie8 DNA MER1_type -2245 172 61 1992 157 0 7 chr20 8169669 8169974 -63983908 - AluJb SINE Alu -9 303 1 306 276 37 0 chr20 8171071 8171175 -63982707 - MIR3 SINE MIR -6 202 93 859 184 72 68 chr20 8172414 8172621 -63981261 + MER3 DNA MER1_type 2 209 0 2946 216 111 31 chr20 8172852 8174040 -63979842 + L1ME2 LINE L1 4881 6164 0 556 227 106 71 chr20 8174212 8174410 -63979472 - MER112 DNA MER1_type -54 206 2 1699 229 46 15 chr20 8174526 8174985 -63978897 - Charlie4a DNA MER1_type -9 499 27 216 97 0 0 chr20 8175612 8175643 -63978239 + (A)n Simple_repeat Simple_repeat 1 31 0 538 281 96 15 chr20 8178172 8178371 -63975511 - MIR SINE MIR 0 262 48 333 306 46 0 chr20 8179173 8179281 -63974601 - MIR SINE MIR 0 262 150 2509 54 0 3 chr20 8179493 8179790 -63974092 + AluY SINE Alu 1 296 -15 268 308 44 11 chr20 8179896 8179987 -63973895 + MIR3 SINE MIR 102 195 -13 185 263 51 102 chr20 8180096 8180233 -63973649 + L2 LINE L2 3138 3267 -5 287 301 153 31 chr20 8181279 8181475 -63972407 + MIR SINE MIR 37 256 -6 786 218 16 57 chr20 8182897 8183090 -63970792 + MER5A DNA MER1_type 5 189 0 1796 162 0 10 chr20 8183345 8183641 -63970241 + AluJb SINE Alu 1 293 -19 261 394 8 0 chr20 8184107 8184234 -63969648 + L3 LINE CR1 349 476 -1101 * 2268 233 95 20 chr20 8184231 8184865 -63969017 + L2 LINE L2 1853 2533 -781 271 149 0 0 chr20 8184864 8184911 -63968971 + L2 LINE L2 3263 3309 -4 * 814 326 159 38 chr20 8184921 8185788 -63968094 + L3 LINE CR1 466 1437 -140 400 316 42 36 chr20 8186082 8186250 -63967632 + MIR SINE MIR 21 189 -73 838 151 68 92 chr20 8186367 8186573 -63967309 + MER3 DNA MER1_type 5 205 -4 369 125 0 16 chr20 8187710 8187774 -63966108 - MER5A DNA MER1_type 0 189 127 854 113 25 12 chr20 8187810 8187970 -63965912 + GA-rich Low_complexity Low_complexity 3 164 0 655 212 45 0 chr20 8187979 8188111 -63965771 - MER5A DNA MER1_type -51 138 1 826 197 22 28 chr20 8188120 8188298 -63965584 + MER5B DNA MER1_type 2 178 0 2262 104 0 3 chr20 8189205 8189502 -63964380 + AluSx SINE Alu 1 296 -16 764 209 133 36 chr20 8189544 8189740 -63964142 + MER20 DNA MER1_type 5 219 0 866 149 0 22 chr20 8191653 8191787 -63962095 - FLAM_C SINE Alu -2 131 1 2238 111 3 0 chr20 8192411 8192708 -63961174 + AluSx SINE Alu 1 298 -14 232 251 52 139 chr20 8192820 8193068 -63960814 + L2 LINE L2 2543 2748 -566 436 290 15 8 chr20 8193068 8193199 -63960683 - MER94 DNA DNA -1 133 2 232 251 52 139 chr20 8193199 8193332 -63960550 + L2 LINE L2 2748 2891 -423 230 246 33 16 chr20 8193692 8193753 -63960129 + L2 LINE L2 3247 3308 -5 316 315 71 22 chr20 8194000 8194112 -63959770 + L1M4 LINE L1 2274 2379 -3767 1992 166 0 0 chr20 8194112 8194414 -63959468 + AluJb SINE Alu 1 302 -10 1968 121 6 54 chr20 8194414 8194729 -63959153 + AluSx SINE Alu 1 300 -12 316 315 71 22 chr20 8194729 8194799 -63959083 + L1M4 LINE L1 2378 2466 -3680 2174 125 0 3 chr20 8194957 8195253 -63958629 + AluSg SINE Alu 1 295 -15 803 109 94 2 chr20 8195662 8195817 -63958065 - L1MA7 LINE L1 -6 6285 6122 250 291 29 39 chr20 8195821 8195924 -63957958 - Charlie7 DNA MER1_type -2509 103 2 817 321 64 13 chr20 8196153 8196542 -63957340 + L2 LINE L2 2896 3304 -9 2274 117 0 7 chr20 8198417 8198725 -63955157 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 8198935 8198958 -63954924 + AT_rich Low_complexity Low_complexity 1 23 0 306 148 19 0 chr20 8199776 8199830 -63954052 - L1MC4 LINE L1 0 8042 7988 253 306 130 9 chr20 8200805 8200913 -63952969 + L2 LINE L2 3152 3272 0 341 242 0 0 chr20 8201009 8201075 -63952807 + FAM SINE Alu 93 158 -17 1825 161 14 3 chr20 8201078 8201363 -63952519 - AluJb SINE Alu -24 288 1 413 173 0 0 chr20 8201398 8201473 -63952409 + MLT1D LTR MaLR 431 505 0 1085 252 109 58 chr20 8202098 8202730 -63951152 + HAL1 LINE L1 1665 2328 -179 349 359 28 0 chr20 8203008 8203150 -63950732 - L2 LINE L2 -616 2698 2553 21 0 0 0 chr20 8203429 8203450 -63950432 + AT_rich Low_complexity Low_complexity 1 21 0 359 267 52 17 chr20 8204336 8204452 -63949430 - L2 LINE L2 0 3272 3153 186 349 0 0 chr20 8206488 8206554 -63947328 + MIR SINE MIR 73 138 -70 528 247 89 108 chr20 8206589 8207006 -63946876 + HAL1 LINE L1 1756 2164 -343 415 208 15 39 chr20 8207050 8207180 -63946702 + HAL1 LINE L1 2304 2430 -77 5158 157 29 32 chr20 8207236 8207682 -63946200 + L1MB7 LINE L1 4878 5324 -860 2346 84 10 0 chr20 8207682 8207990 -63945892 + AluY SINE Alu 1 311 0 5158 157 29 32 chr20 8207990 8208845 -63945037 + L1MB7 LINE L1 5324 6183 -1 233 265 0 0 chr20 8208850 8208899 -63944983 + L1ME2 LINE L1 6059 6107 -57 313 182 15 0 chr20 8208925 8208991 -63944891 + L1MB8 LINE L1 6102 6168 -10 1729 173 26 7 chr20 8209162 8209479 -63944403 + AluJb SINE Alu 1 501 -35 1060 68 28 17 chr20 8209479 8209655 -63944227 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 1729 173 26 7 chr20 8209655 8209692 -63944190 + AluJb SINE Alu 501 536 0 1339 114 25 10 chr20 8209845 8210047 -63943835 - L1PA11 LINE L1 -1 6173 5969 281 299 73 55 chr20 8210118 8210282 -63943600 - MIR3 SINE MIR -6 202 36 317 256 104 30 chr20 8210351 8210515 -63943367 - MIR SINE MIR -70 192 17 416 276 116 74 chr20 8211422 8211759 -63942123 + MARNA DNA Mariner 21 371 -215 1690 198 3 0 chr20 8211844 8212152 -63941730 + AluJb SINE Alu 1 309 -3 2207 128 0 0 chr20 8212647 8212952 -63940930 + AluSq SINE Alu 1 305 -8 663 301 34 10 chr20 8214660 8214866 -63939016 + MIR SINE MIR 23 233 -29 575 196 0 39 chr20 8215096 8215198 -63938684 + AluJ/FLAM SINE Alu 2 99 -213 683 78 39 30 chr20 8215209 8215447 -63938435 + (TA)n Simple_repeat Simple_repeat 1 240 0 808 169 104 13 chr20 8215460 8215614 -63938268 + AluJo SINE Alu 125 292 -20 321 190 63 38 chr20 8215635 8215714 -63938168 + MER94 DNA DNA 2 82 -52 1037 250 5 0 chr20 8215784 8215996 -63937886 + MER58A DNA MER1_type 12 224 0 199 258 180 0 chr20 8216184 8216273 -63937609 + L3 LINE CR1 1181 1285 -292 245 250 0 95 chr20 8216320 8216436 -63937446 + MIR SINE MIR 107 211 -51 240 202 138 83 chr20 8216469 8216578 -63937304 + L3 LINE CR1 1267 1381 -196 2254 93 0 3 chr20 8217129 8217462 -63936420 + AluSc SINE Alu 2 333 0 232 188 43 140 chr20 8217867 8218053 -63935829 - L1ME4a LINE L1 -186 5935 5768 1294 164 102 36 chr20 8218060 8218335 -63935547 + AluJo SINE Alu 6 298 -14 290 286 0 0 chr20 8218364 8218434 -63935448 - L1ME4a LINE L1 -383 5738 5669 254 330 51 25 chr20 8218648 8218766 -63935116 + MIR3 SINE MIR 65 185 -23 325 125 0 28 chr20 8220055 8220127 -63933755 + (TA)n Simple_repeat Simple_repeat 1 70 0 365 203 8 98 chr20 8220185 8220308 -63933574 + L1ME4a LINE L1 5966 6077 -44 238 323 52 21 chr20 8220382 8220478 -63933404 - L2 LINE L2 -22 3250 3152 307 247 177 51 chr20 8220569 8220826 -63933056 + L2 LINE L2 2754 3052 -261 350 219 65 191 chr20 8220841 8220961 -63932921 + L2 LINE L2 2939 3072 -241 1151 126 61 40 chr20 8220961 8221159 -63932723 + L1MA9 LINE L1 6111 6312 0 350 219 65 191 chr20 8221159 8221421 -63932461 + L2 LINE L2 3072 3273 -40 231 294 91 75 chr20 8221438 8221625 -63932257 + L2 LINE L2 3123 3312 -1 25 51 0 0 chr20 8222191 8222230 -63931652 + AT_rich Low_complexity Low_complexity 1 39 0 182 186 47 23 chr20 8222290 8222333 -63931549 - L2 LINE L2 -830 2484 2441 1853 176 75 19 chr20 8223981 8224424 -63929458 + MLT1C LTR MaLR 3 463 -4 1059 267 123 35 chr20 8225117 8225751 -63928131 - L2 LINE L2 -8 3305 2628 1876 167 6 6 chr20 8227252 8227563 -63926319 - AluJo SINE Alu -1 311 1 2041 116 24 3 chr20 8227612 8227904 -63925978 + AluSx SINE Alu 10 307 -5 506 269 66 33 chr20 8228515 8228697 -63925185 - MER112 DNA MER1_type -6 254 67 24 0 0 0 chr20 8228926 8228950 -63924932 + AT_rich Low_complexity Low_complexity 1 24 0 222 118 0 0 chr20 8229334 8229368 -63924514 + (A)n Simple_repeat Simple_repeat 1 34 0 554 204 78 24 chr20 8229876 8230043 -63923839 - MER104 DNA MER2_type -3 177 2 405 324 200 25 chr20 8230477 8230832 -63923050 + HAL1 LINE L1 1231 1647 -860 357 247 101 95 chr20 8231221 8231607 -63922275 + MLT1L LTR MaLR 109 486 -25 326 254 75 94 chr20 8231690 8231726 -63922156 + L1ME3A LINE L1 2439 2474 -4066 866 121 102 19 chr20 8231726 8231883 -63921999 + L1MA4A LINE L1 6133 6302 -1 326 254 75 94 chr20 8231883 8232047 -63921835 + L1ME3A LINE L1 2474 2635 -3905 299 267 173 101 chr20 8232134 8232908 -63920974 + L1ME3A LINE L1 2594 3311 -3229 1458 145 92 0 chr20 8232908 8233191 -63920691 - L1MA7 LINE L1 -2 6289 5981 299 267 173 101 chr20 8233191 8234036 -63919846 + L1ME3A LINE L1 3311 4094 -2446 868 176 0 0 chr20 8234036 8234167 -63919715 + FLAM_C SINE Alu 3 133 0 299 267 173 101 chr20 8234167 8234930 -63918952 + L1ME3A LINE L1 4094 5176 -1364 869 143 0 0 chr20 8234930 8235056 -63918826 + FLAM_C SINE Alu 3 128 -5 299 267 173 101 chr20 8235056 8235225 -63918657 + L1ME3A LINE L1 5176 5331 -1209 318 262 106 14 chr20 8235335 8235476 -63918406 + L1ME3A LINE L1 5494 5647 -893 701 298 83 41 chr20 8235500 8236076 -63917806 + L1ME3A LINE L1 5720 6340 -224 303 269 124 31 chr20 8236379 8236636 -63917246 + HAL1b LINE L1 202 482 -866 29 60 0 0 chr20 8237730 8237780 -63916102 + AT_rich Low_complexity Low_complexity 1 50 0 365 293 43 21 chr20 8239346 8239478 -63914404 - MIR3 SINE MIR -9 199 62 1969 170 93 36 chr20 8239478 8239920 -63913962 - MLT1C LTR MaLR 0 467 1 210 229 220 28 chr20 8241468 8241577 -63912305 + MIR SINE MIR 101 230 -32 24 0 0 0 chr20 8241828 8241852 -63912030 + AT_rich Low_complexity Low_complexity 1 24 0 406 179 15 0 chr20 8241934 8242001 -63911881 + Tigger2 DNA MER2_type 1 68 -2650 * 2405 124 27 105 chr20 8241991 8242398 -63911484 + Tigger2 DNA MER2_type 2273 2638 -80 1876 112 13 64 chr20 8242398 8242711 -63911171 - AluSx SINE Alu -15 297 1 2405 124 27 105 chr20 8242711 8242787 -63911095 + Tigger2 DNA MER2_type 2638 2718 0 1303 199 65 78 chr20 8243801 8244249 -63909633 - MER39 LTR ERV1 0 707 266 39 60 0 0 chr20 8244396 8244463 -63909419 + AT_rich Low_complexity Low_complexity 1 67 0 1764 159 7 7 chr20 8244610 8244916 -63908966 + AluSx SINE Alu 1 306 0 546 239 78 0 chr20 8245149 8245291 -63908591 - L1ME1 LINE L1 -5 6161 6009 1462 253 119 26 chr20 8245882 8246376 -63907506 + MLT1F LTR MaLR 3 542 0 298 284 43 9 chr20 8246536 8246652 -63907230 + HAL1b LINE L1 73 192 -1156 630 150 0 0 chr20 8246691 8246791 -63907091 - L1P5 LINE L1 -405 5751 5652 464 127 13 0 chr20 8246792 8246871 -63907011 + L1PB4 LINE L1 6069 6148 -8 1112 259 13 23 chr20 8246943 8247248 -63906634 + HAL1b LINE L1 279 580 -768 479 241 158 43 chr20 8247265 8247608 -63906274 + HAL1b LINE L1 884 1275 -73 1699 164 3 39 chr20 8247608 8247920 -63905962 - AluJb SINE Alu -11 301 1 479 241 158 43 chr20 8247920 8247950 -63905932 + HAL1b LINE L1 1275 1300 -48 2140 121 0 0 chr20 8248010 8248308 -63905574 - AluSc SINE Alu -11 298 1 2267 84 17 3 chr20 8248385 8248683 -63905199 + AluSg SINE Alu 1 302 -8 21 57 0 0 chr20 8249428 8249463 -63904419 + AT_rich Low_complexity Low_complexity 1 35 0 280 335 105 0 chr20 8249555 8249707 -63904175 + MIR SINE MIR 21 188 -74 2174 100 3 7 chr20 8249833 8250133 -63903749 + AluSx SINE Alu 1 299 -13 268 280 203 17 chr20 8250290 8250408 -63903474 - MIR SINE MIR -13 249 110 1102 75 0 0 chr20 8250465 8250598 -63903284 + AluSq/x SINE Alu 1 133 -180 1916 110 64 0 chr20 8250602 8250866 -63903016 + AluSg SINE Alu 15 295 -15 662 132 0 0 chr20 8253817 8253908 -63899974 + AluSx SINE Alu 2 92 -220 2257 112 3 0 chr20 8253909 8254204 -63899678 + AluSx SINE Alu 1 296 -16 1634 100 0 14 chr20 8254209 8254429 -63899453 + AluSx SINE Alu 84 300 -12 239 276 81 11 chr20 8254547 8254634 -63899248 - MIR SINE MIR 0 262 170 260 152 43 0 chr20 8254663 8254709 -63899173 - MER5A DNA MER1_type -141 48 1 303 262 67 47 chr20 8255314 8255463 -63898419 - MIR SINE MIR -107 155 4 2348 88 0 0 chr20 8255502 8255797 -63898085 + AluY SINE Alu 1 295 -16 259 275 25 12 chr20 8255799 8255879 -63898003 - MIR3 SINE MIR -5 203 123 555 286 120 15 chr20 8255913 8256331 -63897551 + MLT1H LTR MaLR 14 480 -75 182 313 47 0 chr20 8256713 8256777 -63897105 + L2 LINE L2 3241 3307 -6 265 393 16 22 chr20 8256950 8257133 -63896749 - MIR SINE MIR -54 208 27 1573 184 7 39 chr20 8358409 8358719 -63795163 + AluJo SINE Alu 1 300 -12 3744 143 32 18 chr20 8359040 8359725 -63794157 + L1MA7 LINE L1 5546 6240 -51 1573 241 47 3 chr20 8360384 8360765 -63793117 + MLT1H LTR MaLR 9 406 -143 279 275 29 0 chr20 8361303 8361372 -63792510 + polypurine Low_complexity Low_complexity 5 75 0 28 29 0 0 chr20 8361622 8361657 -63792225 + AT_rich Low_complexity Low_complexity 1 35 0 241 250 73 0 chr20 8361860 8361928 -63791954 - L1ME4a LINE L1 -28 6093 6021 23 0 0 0 chr20 8361936 8361959 -63791923 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr20 8362955 8362998 -63790884 + AT_rich Low_complexity Low_complexity 1 43 0 658 253 172 59 chr20 8364374 8364746 -63789136 + LTR33A LTR ERVL 101 514 -9 2357 128 16 13 chr20 8364842 8365224 -63788658 + L1PA15 LINE L1 5783 6165 0 511 48 10 0 chr20 8366508 8366581 -63787301 + L1PA16 LINE L1 5791 5868 -304 384 268 46 26 chr20 8366964 8367117 -63786765 + MIR SINE MIR 107 262 0 611 287 65 4 chr20 8367359 8367589 -63786293 - LTR16A LTR ERVL -189 261 18 181 286 36 0 chr20 8368344 8368400 -63785482 - MIR3 SINE MIR 0 208 151 233 347 70 19 chr20 8368482 8368753 -63785129 - L3 LINE CR1 -203 1374 1090 202 109 65 0 chr20 8368806 8368852 -63785030 + (TA)n Simple_repeat Simple_repeat 1 49 0 3801 144 16 15 chr20 8370179 8370844 -63783038 + L1MA7 LINE L1 5535 6200 -91 265 185 74 12 chr20 8370813 8370894 -63782988 + L1MA9 LINE L1 6222 6307 -5 * 2118 95 0 0 chr20 8371105 8371368 -63782514 - AluSx SINE Alu -21 291 29 462 298 133 9 chr20 8371716 8371896 -63781986 + MIR SINE MIR 70 262 0 996 181 9 37 chr20 8371996 8372211 -63781671 + MER3 DNA MER1_type 1 209 0 878 268 105 28 chr20 8373277 8373706 -63780176 + L1ME4a LINE L1 5616 6077 -44 881 216 0 6 chr20 8373819 8373995 -63779887 + L1PB3 LINE L1 5980 6154 0 381 276 43 9 chr20 8374754 8374870 -63779012 + L2 LINE L2 3193 3312 -1 195 42 0 0 chr20 8374875 8374899 -63778983 + (TGGA)n Simple_repeat Simple_repeat 2 25 0 1174 219 38 35 chr20 8375222 8375719 -63778163 + MLT1H1 LTR MaLR 3 555 0 1059 291 94 31 chr20 8375943 8376421 -63777461 + MLT1G1 LTR MaLR 88 595 0 387 59 0 0 chr20 8377726 8377777 -63776105 - MADE1 DNA Mariner -1 79 29 228 128 26 0 chr20 8377792 8377831 -63776051 - L1P LINE L1 -1194 4952 4913 711 215 37 23 chr20 8377937 8378155 -63775727 + L1ME LINE L1 5429 5636 -534 770 190 0 0 chr20 8378155 8378343 -63775539 + FLAM_C SINE Alu 2 189 0 230 98 24 0 chr20 8378370 8378411 -63775471 - L1MB1 LINE L1 -24 6144 6103 6487 184 27 9 chr20 8378440 8380533 -63773349 - L1MB1 LINE L1 -36 6132 4001 434 179 142 0 chr20 8381232 8381338 -63772544 + MER3 DNA MER1_type 49 122 -87 1250 195 70 6 chr20 8381353 8381712 -63772170 + MER3 DNA MER1_type 2243 2624 0 256 331 70 86 chr20 8381839 8382096 -63771786 - L2 LINE L2 -2 3270 3018 2308 113 54 41 chr20 8382772 8383163 -63770719 - MER57A LTR ERV1 0 403 8 338 261 146 12 chr20 8383190 8383355 -63770527 + L2 LINE L2 1314 1500 -1814 4413 178 57 6 chr20 8383506 8384326 -63769556 + MER21B LTR ERV1 1 862 -1 450 307 118 16 chr20 8384412 8384592 -63769290 - L1MDa LINE L1 -4611 2110 1950 2223 100 0 13 chr20 8384592 8384891 -63768991 + AluSx SINE Alu 1 295 -17 450 307 118 16 chr20 8384891 8385425 -63768457 - L1MDa LINE L1 -4771 1950 1268 24 0 0 0 chr20 8385493 8385517 -63768365 + AT_rich Low_complexity Low_complexity 1 24 0 439 189 0 0 chr20 8386667 8386757 -63767125 - L1MA8 LINE L1 -5 6286 6197 244 294 143 0 chr20 8386902 8387014 -63766868 - MIR SINE MIR -62 146 34 192 193 35 35 chr20 8387033 8387090 -63766792 + MER5A DNA MER1_type 13 69 -120 267 225 0 0 chr20 8387647 8387718 -63766164 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 1716 139 78 12 chr20 8387920 8388251 -63765631 + L1MA9 LINE L1 5959 6311 -1 27 49 0 0 chr20 8388251 8388292 -63765590 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr20 8388472 8388496 -63765386 + AT_rich Low_complexity Low_complexity 1 24 0 274 179 0 0 chr20 8388631 8388670 -63765212 - AluJo SINE Alu -21 281 243 676 157 0 17 chr20 8388670 8388785 -63765097 - AluJo SINE Alu -154 158 46 1786 145 10 46 chr20 8389441 8389744 -63764138 + AluJo SINE Alu 5 296 -16 243 0 0 0 chr20 8392053 8392080 -63761802 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 437 303 8 0 chr20 8392902 8393024 -63760858 + MER115 DNA AcHobo 25 147 -546 2364 195 33 0 chr20 8393039 8393491 -63760391 + MLT1C LTR MaLR 1 467 0 543 286 75 36 chr20 8393638 8393890 -63759992 + MER115 DNA AcHobo 360 621 -72 22 56 0 0 chr20 8394965 8395001 -63758881 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr20 8395079 8395101 -63758781 + (A)n Simple_repeat Simple_repeat 1 22 0 294 157 57 14 chr20 8396473 8396543 -63757339 - MLT1I LTR MaLR -6 403 331 283 279 79 21 chr20 8396709 8396849 -63757033 - MLT1J2 LTR MaLR -286 164 17 185 26 0 0 chr20 8397387 8397614 -63756268 + AT_rich Low_complexity Low_complexity 1 227 0 576 293 61 0 chr20 8397831 8398012 -63755870 - MIR SINE MIR -26 236 45 2071 136 25 14 chr20 8398222 8398582 -63755300 - MSTB LTR MaLR -57 369 6 1077 151 26 0 chr20 8399029 8399221 -63754661 - L1PA13 LINE L1 -21 6142 5946 22 0 0 0 chr20 8399351 8399373 -63754509 + AT_rich Low_complexity Low_complexity 1 22 0 1493 122 9 5 chr20 8400305 8400519 -63753363 - AluSp SINE Alu -13 300 86 300 324 39 39 chr20 8400530 8400712 -63753170 + L3b LINE CR1 1271 1452 -131 489 336 24 45 chr20 8400941 8401230 -63752652 + L2 LINE L2 3006 3288 -25 621 111 0 0 chr20 8401716 8401806 -63752076 + MLT2C2 LTR ERVL 1 90 -374 492 99 0 0 chr20 8401841 8401912 -63751970 + (TA)n Simple_repeat Simple_repeat 2 72 0 442 146 101 0 chr20 8401957 8402046 -63751836 + MLT2C2 LTR ERVL 3 100 -364 2332 251 93 15 chr20 8403798 8404650 -63749232 - L1MC4 LINE L1 0 8042 7125 1738 154 89 31 chr20 8405739 8406264 -63747618 - MLT2A2 LTR ERVL 0 554 1 2819 7 0 0 chr20 8406600 8406906 -63746976 + AluYa5 SINE Alu 1 306 -5 827 229 17 6 chr20 8407044 8407219 -63746663 + MER45A DNA AcHobo 1 177 -1 1680 189 19 73 chr20 8407465 8407878 -63746004 - MSTD LTR MaLR 0 396 6 259 382 53 0 chr20 8408297 8408428 -63745454 - MIR3 SINE MIR -41 167 30 368 317 8 24 chr20 8408582 8408705 -63745177 - MIR3 SINE MIR -13 195 75 252 345 74 20 chr20 8409097 8409245 -63744637 + L3b LINE CR1 1223 1378 -205 350 46 62 0 chr20 8409849 8409914 -63743968 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 292 185 200 0 chr20 8411805 8411870 -63742012 - L2 LINE L2 0 3272 3195 1087 206 14 106 chr20 8412269 8412702 -63741180 + LTR16A1 LTR ERVL 55 447 -10 3703 130 30 0 chr20 8412992 8413599 -63740283 - L1PB4 LINE L1 0 6156 5532 617 192 58 0 chr20 8413599 8413755 -63740127 + L1 LINE L1 5187 5351 -795 894 83 35 0 chr20 8413939 8414084 -63739798 + L1P5 LINE L1 5328 5477 -679 1065 150 20 36 chr20 8414090 8414337 -63739545 - L1MA4 LINE L1 -3 6297 6055 219 36 0 0 chr20 8415689 8415717 -63738165 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1066 186 0 10 chr20 8415724 8415928 -63737954 - L1PA16 LINE L1 -1 6165 5964 406 94 0 0 chr20 8415928 8415992 -63737890 + L1P5 LINE L1 5462 5525 -631 1233 258 122 0 chr20 8416035 8416454 -63737428 - L1ME2 LINE L1 -9 6155 5686 189 0 0 0 chr20 8416945 8416966 -63736916 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 490 248 28 0 chr20 8417108 8417217 -63736665 - MIR SINE MIR -71 191 80 2315 215 13 13 chr20 8418052 8418586 -63735296 + MER74A LTR ERVL 1 534 -24 2474 126 48 10 chr20 8418651 8419063 -63734819 - MSTA LTR MaLR 0 428 1 1552 127 43 49 chr20 8419071 8419694 -63734188 + L1MCa LINE L1 1328 2043 -4383 2110 142 31 36 chr20 8419695 8419764 -63734118 - Tigger2 DNA MER2_type 0 2718 2650 2271 112 0 0 chr20 8419764 8420060 -63733822 - AluSx SINE Alu -16 296 1 2110 142 31 36 chr20 8420060 8420377 -63733505 - Tigger2 DNA MER2_type -68 2650 2334 2432 125 6 54 chr20 8420414 8420630 -63733252 + L1MCa LINE L1 2041 2266 -4160 2196 117 7 3 chr20 8420630 8420938 -63732944 + AluSg SINE Alu 1 309 -1 2432 125 6 54 chr20 8420938 8421276 -63732606 + L1MCa LINE L1 2266 2578 -3848 273 75 0 0 chr20 8421319 8421359 -63732523 + (TG)n Simple_repeat Simple_repeat 2 41 0 1054 172 25 0 chr20 8421783 8421981 -63731901 - MER3 DNA MER1_type 0 209 7 888 260 114 6 chr20 8422033 8422383 -63731499 - LTR33A LTR ERVL -75 448 61 928 216 22 0 chr20 8422654 8422835 -63731047 + MER5A DNA MER1_type 1 185 -4 839 142 0 0 chr20 8423324 8423444 -63730438 + FLAM_C SINE Alu 1 120 -13 5301 57 6 6 chr20 8423461 8424141 -63729741 + L1PA7 LINE L1 5475 6154 0 821 214 0 18 chr20 8424141 8424309 -63729573 + FRAM SINE Alu 1 162 -14 603 272 61 10 chr20 8424541 8424755 -63729127 + MIR SINE MIR 40 260 -2 25 0 0 0 chr20 8425867 8425892 -63727990 + AT_rich Low_complexity Low_complexity 1 25 0 4507 138 33 14 chr20 8426565 8427392 -63726490 + L1MA8 LINE L1 5278 6119 -172 682 99 57 7 chr20 8427392 8427533 -63726349 + GA-rich Low_complexity Low_complexity 4 151 0 292 391 75 11 chr20 8427666 8427932 -63725950 - L2 LINE L2 -562 2752 2470 798 274 134 8 chr20 8427960 8428332 -63725550 - LTR16C LTR ERVL 0 491 73 1904 151 17 3 chr20 8428479 8428770 -63725112 + AluJb SINE Alu 3 297 -15 1100 167 28 32 chr20 8430838 8431054 -63722828 - MER20 DNA MER1_type 0 219 5 1884 156 0 11 chr20 8432027 8432309 -63721573 - AluJo SINE Alu -22 290 12 414 246 22 43 chr20 8432669 8432807 -63721075 - MIR SINE MIR -1 261 127 285 332 134 51 chr20 8433060 8433352 -63720530 - L2 LINE L2 -24 3248 2933 353 326 0 0 chr20 8433414 8433506 -63720376 - L2 LINE L2 -37 3276 3185 242 259 102 37 chr20 8433522 8433630 -63720252 + MLT1G1 LTR MaLR 16 130 -465 1348 231 175 19 chr20 8433830 8434316 -63719566 - MLT1G1 LTR MaLR -12 583 22 267 162 73 29 chr20 8434368 8434436 -63719446 + MLT1H LTR MaLR 454 524 -25 1281 160 5 0 chr20 8434718 8434924 -63718958 + AluJo SINE Alu 68 274 -38 1120 98 0 22 chr20 8434927 8435111 -63718771 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 413 195 49 0 chr20 8435123 8435246 -63718636 + GA-rich Low_complexity Low_complexity 4 132 0 201 200 0 40 chr20 8435814 8435864 -63718018 + CT-rich Low_complexity Low_complexity 4 51 0 642 276 24 84 chr20 8436078 8436457 -63717425 - MLT1G3 LTR MaLR -230 323 10 1749 166 10 22 chr20 8437083 8437397 -63716485 + AluSx SINE Alu 3 312 0 842 239 0 16 chr20 8437677 8437861 -63716021 - MER5A DNA MER1_type -8 181 1 197 255 39 20 chr20 8437888 8437939 -63715943 + L2 LINE L2 3008 3059 -254 866 209 6 0 chr20 8438198 8438375 -63715507 - MER5B DNA MER1_type 0 178 1 1080 128 0 16 chr20 8439146 8439334 -63714548 - MER53 DNA DNA -1 188 4 465 335 110 39 chr20 8441643 8442189 -63711693 + L1MC3 LINE L1 924 1508 -4864 1710 201 3 19 chr20 8442250 8442564 -63711318 + AluJb SINE Alu 3 311 -1 369 334 135 32 chr20 8442581 8442922 -63710960 + HAL1b LINE L1 327 1765 -646 203 0 0 36 chr20 8442946 8442974 -63710908 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2112 105 0 46 chr20 8443053 8443377 -63710505 + AluY SINE Alu 1 309 -2 1657 128 0 11 chr20 8443509 8443775 -63710107 - L1PB1 LINE L1 0 6151 5889 3377 78 14 0 chr20 8443779 8444279 -63709603 - L1PB1 LINE L1 -360 5791 5285 450 268 95 30 chr20 8444284 8444567 -63709315 + L1MC3 LINE L1 2169 2467 -3917 584 270 152 46 chr20 8444632 8445257 -63708625 + HAL1 LINE L1 1 691 -1816 1072 21 28 0 chr20 8445332 8445474 -63708408 - L1PA4 LINE L1 -788 5358 5213 6830 21 1 0 chr20 8445477 8446268 -63707614 + L1PA4 LINE L1 5361 6152 -3 290 270 139 48 chr20 8446316 8446819 -63707063 + L1MC3 LINE L1 4307 4855 -1527 1033 269 44 16 chr20 8446849 8447277 -63706605 + L1MC3 LINE L1 5943 6382 -1639 225 83 0 0 chr20 8447828 8447864 -63706018 + (TG)n Simple_repeat Simple_repeat 2 37 0 2316 175 102 0 chr20 8447866 8448318 -63705564 - MER54B LTR ERVL -295 498 1 414 135 0 0 chr20 8448374 8448392 -63705490 + (TC)n Simple_repeat Simple_repeat 2 19 -56 387 0 0 0 chr20 8448392 8448435 -63705447 + (CA)n Simple_repeat Simple_repeat 1 43 0 414 135 0 0 chr20 8448435 8448490 -63705392 + (TC)n Simple_repeat Simple_repeat 18 75 0 884 58 15 2 chr20 8449136 8449270 -63704612 - L1HS LINE L1 0 6154 5990 769 325 133 25 chr20 8449270 8449464 -63704418 + L2 LINE L2 885 1057 -2257 1544 206 62 37 chr20 8449464 8449896 -63703986 + LTR47B LTR ERVL 1 443 0 769 325 133 25 chr20 8449896 8449994 -63703888 + L2 LINE L2 1057 1143 -2171 2371 93 0 10 chr20 8449994 8450304 -63703578 - AluSx SINE Alu -5 307 1 769 325 133 25 chr20 8450304 8450499 -63703383 + L2 LINE L2 1143 1426 -1888 358 258 114 3 chr20 8450529 8450762 -63703120 + L1MEc LINE L1 1536 1910 -4653 303 329 29 22 chr20 8451242 8451379 -63702503 + L1MEc LINE L1 2447 2584 -3798 4970 150 23 8 chr20 8451412 8452419 -63701463 - L1PA16 LINE L1 -16 6150 5128 206 224 20 0 chr20 8454620 8454669 -63699213 + C-rich Low_complexity Low_complexity 4 53 0 220 165 0 51 chr20 8454690 8454769 -63699113 + CT-rich Low_complexity Low_complexity 3 77 0 258 56 0 0 chr20 8454769 8454805 -63699077 + (CCA)n Simple_repeat Simple_repeat 2 37 0 5703 203 2 3 chr20 8455140 8456409 -63697473 - L1 LINE L1 -1011 5135 3868 357 277 117 49 chr20 8456653 8457021 -63696861 + L1MEc LINE L1 2874 3284 -3098 2984 118 12 0 chr20 8457021 8457444 -63696438 + MSTA LTR MaLR 1 428 0 357 277 117 49 chr20 8457444 8457562 -63696320 + L1MEc LINE L1 3284 3393 -2989 550 279 59 69 chr20 8457595 8458464 -63695418 + L1MEc LINE L1 3496 4364 -2018 595 226 25 3 chr20 8458546 8458833 -63695049 + GA-rich Low_complexity Low_complexity 1 293 0 723 184 0 22 chr20 8458873 8459052 -63694830 + GA-rich Low_complexity Low_complexity 2 176 0 275 200 0 0 chr20 8459107 8459167 -63694715 - MLT1D LTR MaLR -8 559 500 704 342 39 24 chr20 8459171 8459583 -63694299 + L1M3c LINE L1 643 1060 -5719 1854 242 48 47 chr20 8460282 8461438 -63692444 + L1M3c LINE L1 1574 2677 -4172 1542 75 0 0 chr20 8461523 8461710 -63692172 + AluY SINE Alu 1 187 -124 358 234 52 0 chr20 8462342 8462419 -63691463 + L2 LINE L2 3187 3267 -5 199 311 87 29 chr20 8463314 8463417 -63690465 - MIR SINE MIR -108 154 46 545 308 68 51 chr20 8464163 8464745 -63689137 + L1ME2 LINE L1 5284 5884 -280 24 0 0 0 chr20 8464923 8464947 -63688935 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr20 8465110 8465137 -63688745 + AT_rich Low_complexity Low_complexity 1 27 0 273 356 54 27 chr20 8465739 8465888 -63687994 - MIR3 SINE MIR -14 194 42 201 298 0 0 chr20 8466203 8466250 -63687632 + polypyrimidine Low_complexity Low_complexity 6 52 0 658 122 320 0 chr20 8466351 8466498 -63687384 - MER3 DNA MER1_type -7 202 9 1361 249 71 48 chr20 8467736 8468214 -63685668 + LTR33 LTR ERVL 19 507 -14 207 283 123 9 chr20 8468592 8468698 -63685184 + L2 LINE L2 2828 2945 -369 512 253 71 0 chr20 8468934 8469104 -63684778 + LTR33A LTR ERVL 288 469 -54 239 217 29 0 chr20 8469445 8469514 -63684368 + (TA)n Simple_repeat Simple_repeat 1 71 0 1183 186 35 64 chr20 8469521 8469833 -63684049 - MLT1D LTR MaLR -78 427 125 2179 208 28 16 chr20 8469833 8470377 -63683505 - MLT1D-int LTR MaLR -821 550 1 2294 181 14 45 chr20 8470378 8470892 -63682990 - MLT1D LTR MaLR -1 504 7 924 269 61 17 chr20 8470895 8471192 -63682690 + LTR16C LTR ERVL 181 490 -1 698 182 0 0 chr20 8471372 8471482 -63682400 + FLAM_A SINE Alu 16 125 -17 1079 187 23 14 chr20 8471585 8471799 -63682083 + MER20 DNA MER1_type 4 219 0 294 274 12 54 chr20 8472295 8472463 -63681419 + CT-rich Low_complexity Low_complexity 3 163 0 4963 127 17 6 chr20 8473030 8473680 -63680202 - L1MA5 LINE L1 0 6300 5638 1071 188 30 0 chr20 8473680 8473882 -63680000 - MER6B DNA MER2_type 0 210 3 4963 127 17 6 chr20 8473882 8474059 -63679823 - L1MA5 LINE L1 -662 5638 5464 188 273 0 0 chr20 8474254 8474298 -63679584 - L2 LINE L2 -10 3262 3219 229 316 8 23 chr20 8474329 8474462 -63679420 + CT-rich Low_complexity Low_complexity 1 131 0 326 265 59 59 chr20 8474468 8474604 -63679278 - MIR SINE MIR -107 155 20 609 345 3 0 chr20 8475472 8475778 -63678104 + L1M4c LINE L1 1515 1979 -4559 2008 168 59 10 chr20 8475826 8476230 -63677652 - MSTB LTR MaLR 0 426 3 21 36 0 0 chr20 8476230 8476258 -63677624 + AT_rich Low_complexity Low_complexity 1 28 0 786 230 62 22 chr20 8476258 8476577 -63677305 - L1ME LINE L1 -608 5558 5228 * 1266 244 60 38 chr20 8476574 8476598 -63677284 + L1ME1 LINE L1 5648 5670 -496 2232 114 3 0 chr20 8476598 8476895 -63676987 + AluSx SINE Alu 1 298 -14 1266 244 60 38 chr20 8476895 8477367 -63676515 + L1ME1 LINE L1 5670 6155 -11 2024 142 0 3 chr20 8477369 8477665 -63676217 - AluSx SINE Alu -17 295 1 620 261 40 0 chr20 8477840 8478089 -63675793 + L1ME3A LINE L1 4459 4717 -1429 2512 255 87 10 chr20 8478138 8479216 -63674666 + L1ME3A LINE L1 4996 6159 -11 339 25 0 0 chr20 8480178 8480218 -63673664 + (TG)n Simple_repeat Simple_repeat 2 41 0 219 366 59 0 chr20 8480279 8480380 -63673502 - MIR SINE MIR -72 136 30 452 346 53 5 chr20 8481037 8481245 -63672637 + MIR SINE MIR 40 257 -5 293 290 70 10 chr20 8483126 8483226 -63670656 - L2 LINE L2 -1 3271 3166 529 307 45 31 chr20 8483560 8483850 -63670032 - LTR16C LTR ERVL -10 481 188 430 356 75 62 chr20 8484303 8484542 -63669340 + L2 LINE L2 2866 3113 -159 1629 178 58 3 chr20 8484542 8484834 -63669048 - AluJo SINE Alu -4 308 1 430 356 75 62 chr20 8484834 8484996 -63668886 + L2 LINE L2 3113 3272 0 274 280 142 66 chr20 8486412 8487495 -63666387 + HAL1 LINE L1 49 1214 -1293 313 180 49 0 chr20 8487567 8487628 -63666254 + MER5A DNA MER1_type 49 112 -77 325 277 20 0 chr20 8487635 8487736 -63666146 + HAL1 LINE L1 1648 1750 -757 498 277 75 28 chr20 8487781 8488142 -63665740 + HAL1 LINE L1 2016 2393 -114 495 320 39 6 chr20 8488718 8488896 -63664986 + MIR SINE MIR 24 207 -55 2127 100 27 10 chr20 8490083 8490384 -63663498 + AluSx SINE Alu 1 306 -6 382 255 0 0 chr20 8490394 8490496 -63663386 + L1ME3 LINE L1 5894 5995 -167 2940 107 49 0 chr20 8491017 8491449 -63662433 + MLT2A2 LTR ERVL 1 453 0 294 29 0 0 chr20 8491634 8491669 -63662213 + (TAGG)n Simple_repeat Simple_repeat 1 35 0 875 233 101 9 chr20 8491840 8492068 -63661814 - MLT1G LTR MaLR -310 280 32 258 250 50 0 chr20 8492484 8492564 -63661318 + MIR SINE MIR 124 207 -55 2367 65 10 0 chr20 8493515 8493807 -63660075 - AluY SINE Alu -16 295 1 1888 270 54 22 chr20 8494073 8494702 -63659180 - MLT2F LTR ERVL -14 649 1 415 184 145 95 chr20 8496169 8496348 -63657534 + MER5A DNA MER1_type 1 188 -1 2163 161 108 33 chr20 8497027 8497319 -63656563 + LTR49 LTR ERV1 1 270 -325 2784 93 3 11 chr20 8497319 8497697 -63656185 - THE1C LTR MaLR 0 375 1 2163 161 108 33 chr20 8497697 8497892 -63655990 + LTR49 LTR ERV1 270 536 -59 2015 122 31 0 chr20 8497892 8498180 -63655702 - AluSx SINE Alu -15 297 1 2163 161 108 33 chr20 8498180 8498237 -63655645 + LTR49 LTR ERV1 536 587 -8 457 276 106 35 chr20 8498691 8498789 -63655093 + MIR SINE MIR 70 160 -102 4061 122 19 0 chr20 8498789 8499411 -63654471 - MER41B LTR ERV1 -1 634 1 457 276 106 35 chr20 8499411 8499482 -63654400 + MIR SINE MIR 160 251 -11 184 286 0 52 chr20 8501793 8501870 -63652012 + L2 LINE L2 3241 3313 0 485 248 18 0 chr20 8502476 8502589 -63651293 + MIR SINE MIR 31 145 -117 193 229 62 0 chr20 8503005 8503053 -63650829 - L2 LINE L2 -7 3306 3256 182 179 77 0 chr20 8503019 8503058 -63650824 - MIR SINE MIR -18 244 203 * 274 246 0 0 chr20 8503343 8503400 -63650482 + L2 LINE L2 3207 3263 -9 548 296 65 26 chr20 8503634 8503942 -63649940 - LTR16C LTR ERVL -3 488 169 360 172 107 25 chr20 8504308 8504430 -63649452 - Charlie1 DNA MER1_type -160 2601 2470 4775 155 38 8 chr20 8504437 8505413 -63648469 - L1PA16 LINE L1 0 6166 5171 526 252 161 56 chr20 8505655 8505996 -63647886 - MLT1J1 LTR MaLR 0 446 70 2549 58 3 0 chr20 8506457 8506783 -63647099 + L1PA5 LINE L1 5815 6141 -13 210 118 0 0 chr20 8506814 8506848 -63647034 + (A)n Simple_repeat Simple_repeat 1 34 0 503 216 0 72 chr20 8507139 8507278 -63646604 - MLT1H LTR MaLR -198 351 223 352 250 144 101 chr20 8507279 8507723 -63646159 + L1MC4a LINE L1 4601 5063 -1083 1531 209 49 49 chr20 8508064 8508560 -63645322 - L1MA9 LINE L1 -38 6274 5776 2545 181 7 0 chr20 8508560 8509024 -63644858 - L1PA16 LINE L1 -6 6160 5694 327 299 45 38 chr20 8509411 8509568 -63644314 - L1 LINE L1 -2714 3432 3275 380 189 0 0 chr20 8509573 8509647 -63644235 - L1PA15 LINE L1 -5 6160 6087 438 133 0 0 chr20 8509649 8509724 -63644158 - L1M2 LINE L1 -528 5784 5710 801 175 48 12 chr20 8509728 8509894 -63643988 - MER58A DNA MER1_type -11 213 42 819 297 68 12 chr20 8509920 8510368 -63643514 + L1MC4a LINE L1 5513 5982 -139 2274 102 3 0 chr20 8510524 8510819 -63643063 + AluSg SINE Alu 1 296 -14 672 194 71 0 chr20 8511661 8511816 -63642066 - LTR16A1 LTR ERVL -50 407 242 265 282 24 12 chr20 8511900 8511985 -63641897 - LTR16A1 LTR ERVL -371 86 1 1718 192 126 21 chr20 8512167 8512401 -63641481 - MLT1C LTR MaLR -1 466 258 387 60 0 0 chr20 8512401 8512451 -63641431 + (TG)n Simple_repeat Simple_repeat 2 51 0 1718 192 126 21 chr20 8512451 8512638 -63641244 - MLT1C LTR MaLR -209 258 1 655 269 196 16 chr20 8513900 8514272 -63639610 + MLT1H LTR MaLR 1 439 -110 572 248 8 0 chr20 8514383 8514508 -63639374 + L2 LINE L2 3187 3312 -1 536 341 24 0 chr20 8514541 8514752 -63639130 - MIR SINE MIR 0 262 47 971 205 45 68 chr20 8515231 8515275 -63638607 - MLT2D LTR ERVL 0 414 370 333 68 0 0 chr20 8515275 8515319 -63638563 + (TG)n Simple_repeat Simple_repeat 2 45 0 971 205 45 68 chr20 8515319 8515611 -63638271 - MLT2D LTR ERVL -44 370 86 1724 196 5 7 chr20 8515979 8516393 -63637489 - L1 LINE L1 -2777 3369 2957 * 7873 138 22 18 chr20 8516390 8518961 -63634921 + L1MA3 LINE L1 3725 6305 0 709 279 45 11 chr20 8519009 8519399 -63634483 + L1ME LINE L1 5226 5626 -538 530 218 98 36 chr20 8519551 8519744 -63634138 - MLT1J2 LTR MaLR -244 206 2 311 230 65 101 chr20 8519745 8519884 -63633998 + L1ME LINE L1 5622 5755 -409 1073 360 108 2 chr20 8519885 8520516 -63633366 - L2 LINE L2 -1665 1649 952 332 209 23 12 chr20 8520746 8520832 -63633050 + LTR16C LTR ERVL 403 489 -2 1867 254 138 40 chr20 8521340 8522135 -63631747 - L2 LINE L2 -1025 2289 1417 497 210 18 27 chr20 8522372 8522540 -63631342 + L1ME LINE L1 4876 5046 -1100 2382 94 0 3 chr20 8522606 8522915 -63630967 + AluY SINE Alu 1 308 -3 286 244 96 0 chr20 8522972 8523107 -63630775 + L1ME LINE L1 5039 5186 -960 4266 109 14 5 chr20 8523108 8523742 -63630140 + L1PA14 LINE L1 5505 6144 -17 26 0 0 0 chr20 8523744 8523770 -63630112 + AT_rich Low_complexity Low_complexity 1 26 0 1026 207 28 26 chr20 8523770 8524130 -63629752 + L1ME LINE L1 5175 5535 -627 777 239 104 63 chr20 8524134 8524549 -63629333 - MER50 LTR ERV1 -293 441 10 407 273 47 40 chr20 8524698 8524782 -63629100 + MIR SINE MIR 50 137 -125 1724 160 31 82 chr20 8524782 8525207 -63628675 - MER57A LTR ERV1 0 403 1 407 273 47 40 chr20 8525207 8525272 -63628610 + MIR SINE MIR 137 200 -62 1645 163 123 30 chr20 8526818 8527216 -63626666 - MER63B DNA MER1_type 0 436 2 1006 259 73 34 chr20 8527560 8527970 -63625912 - LTR16A LTR ERVL 0 450 25 303 260 27 107 chr20 8529076 8529226 -63624656 - MIR SINE MIR -34 228 91 416 301 196 0 chr20 8529920 8530093 -63623789 - MIR SINE MIR 0 262 56 2100 193 0 48 chr20 8530581 8530810 -63623072 - MER63B DNA MER1_type -629 433 235 1630 202 7 10 chr20 8530810 8531102 -63622780 - AluJb SINE Alu -16 296 6 2100 193 0 48 chr20 8531102 8531327 -63622555 - MER63B DNA MER1_type -827 235 1 2307 231 12 12 chr20 8531424 8531938 -63621944 - MLT1F LTR MaLR -5 537 24 738 272 75 8 chr20 8531990 8532258 -63621624 - MLT1B LTR MaLR -40 350 65 2528 65 3 0 chr20 8532515 8532825 -63621057 + AluY SINE Alu 1 311 0 328 313 92 12 chr20 8532882 8533045 -63620837 + MIR SINE MIR 71 246 -16 196 319 97 49 chr20 8533616 8533760 -63620122 - MIR3 SINE MIR -5 203 53 1579 239 66 8 chr20 8533864 8534041 -63619841 - MER90 LTR ERV1 0 614 449 2599 46 0 0 chr20 8534041 8534344 -63619538 + AluY SINE Alu 1 303 -8 1579 239 66 8 chr20 8534344 8534658 -63619224 - MER90 LTR ERV1 -165 449 1 208 225 0 0 chr20 8534670 8534710 -63619172 + GA-rich Low_complexity Low_complexity 3 42 0 201 384 14 0 chr20 8534750 8534847 -63619035 - MIR SINE MIR -64 144 56 2317 86 7 3 chr20 8536937 8537238 -63616644 - AluSc SINE Alu -7 302 1 2675 115 44 0 chr20 8538727 8539137 -63614745 + MSTA LTR MaLR 1 428 0 14587 131 16 13 chr20 8539321 8541730 -63612152 + Tigger1 DNA MER2_type 1 2417 -1 1725 168 25 7 chr20 8544571 8544856 -63609026 + AluJo SINE Alu 1 290 -22 30 27 0 0 chr20 8544858 8544895 -63608987 + AT_rich Low_complexity Low_complexity 1 37 0 4909 227 27 54 chr20 8545113 8546526 -63607356 + MER45R DNA AcHobo 1 1375 -206 1333 233 78 8 chr20 8546526 8546887 -63606995 - MLT1C LTR MaLR 0 467 82 2933 39 0 0 chr20 8546887 8547242 -63606640 + L1PA4 LINE L1 5798 6152 -3 541 168 8 17 chr20 8547340 8547459 -63606423 + MER45R DNA AcHobo 1365 1482 -99 737 199 0 7 chr20 8547463 8547614 -63606268 + L1MB3 LINE L1 6032 6181 -2 654 188 16 8 chr20 8547797 8547925 -63605957 + MER45R DNA AcHobo 1452 1580 -1 2263 103 7 0 chr20 8547981 8548282 -63605600 + AluSp SINE Alu 1 303 -10 315 155 0 155 chr20 8549053 8549156 -63604726 - L1ME3 LINE L1 -127 6035 5949 322 270 40 48 chr20 8549205 8549331 -63604551 + L1MEd LINE L1 1024 1148 -4971 415 292 115 49 chr20 8549348 8549739 -63604143 + HAL1 LINE L1 1329 1745 -762 15319 191 30 18 chr20 8550347 8556681 -63597201 + L1PB1 LINE L1 6 6507 -360 518 162 0 36 chr20 8556681 8556881 -63597001 + (TA)n Simple_repeat Simple_repeat 1 192 0 253 232 0 0 chr20 8556900 8556956 -63596926 + L1 LINE L1 3952 4007 -2139 246 108 0 0 chr20 8556955 8556992 -63596890 - L1P4 LINE L1 -356 5818 5782 * 574 88 0 85 chr20 8556993 8557302 -63596580 + (TA)n Simple_repeat Simple_repeat 1 282 0 2316 133 3 5 chr20 8557323 8557692 -63596190 + L1PB1 LINE L1 6499 6866 -1 210 218 0 58 chr20 8557722 8557809 -63596073 + A-rich Low_complexity Low_complexity 2 83 0 5536 157 38 11 chr20 8558019 8559607 -63594275 - L1PA16 LINE L1 -9 6157 4536 419 276 24 8 chr20 8559850 8559977 -63593905 - L1MC4a LINE L1 -1939 5869 5741 235 191 21 0 chr20 8560012 8560059 -63593823 - MER53 DNA DNA -3 186 139 508 162 38 0 chr20 8560121 8560226 -63593656 - L1MC4a LINE L1 -408 5756 5648 658 223 8 0 chr20 8560349 8560470 -63593412 - FLAM_C SINE Alu -21 122 1 1772 245 48 5 chr20 8560560 8560980 -63592902 - MER82 DNA MER2_type -4 649 212 396 125 0 0 chr20 8560983 8561047 -63592835 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 1002 175 0 11 chr20 8561048 8561231 -63592651 - MER82 DNA MER2_type -450 203 23 2286 68 17 7 chr20 8562158 8562451 -63591431 + AluY SINE Alu 1 296 -15 42587 34 22 1 chr20 8562556 8568579 -63585303 + L1PA2 LINE L1 3 6155 0 1467 168 21 32 chr20 8569283 8569563 -63584319 + Tigger3(Golem) DNA MER2_type 1 277 -2752 614 176 162 0 chr20 8569563 8569705 -63584177 + MER7A DNA MER2_type 2 164 -182 13407 173 23 5 chr20 8569749 8573328 -63580554 - L1PA15-16 LINE L1 -3630 3219 12 1870 297 116 8 chr20 8573347 8574206 -63579676 + L2 LINE L2 2224 3175 -138 410 197 0 0 chr20 8574431 8574497 -63579385 + AluJ/FLAM SINE Alu 3 68 -244 635 221 0 8 chr20 8574505 8574627 -63579255 - FLAM_C SINE Alu -10 123 3 34 72 0 0 chr20 8574635 8574704 -63579178 + AT_rich Low_complexity Low_complexity 1 69 0 633 313 58 3 chr20 8574999 8575325 -63578557 + L1ME4a LINE L1 5522 5865 -256 2417 84 0 3 chr20 8575326 8575634 -63578248 + AluSc SINE Alu 1 307 -2 22 35 0 0 chr20 8575845 8575874 -63578008 + AT_rich Low_complexity Low_complexity 1 29 0 15108 186 39 8 chr20 8576169 8577184 -63576698 + L1M2 LINE L1 7 989 -5859 399 41 0 0 chr20 8577184 8577233 -63576649 + (CA)n Simple_repeat Simple_repeat 1 49 0 15108 186 39 8 chr20 8577233 8579185 -63574697 + L1M2 LINE L1 989 3064 -3784 374 349 86 14 chr20 8579192 8579401 -63574481 - MIR SINE MIR -37 225 2 545 331 78 9 chr20 8579640 8580039 -63573843 - MLT1K LTR MaLR 0 588 115 4080 156 42 11 chr20 8580451 8581253 -63572629 + L1MA8 LINE L1 5464 6290 -1 3308 160 20 24 chr20 8581264 8581900 -63571982 + L1MA9 LINE L1 5591 6224 -88 227 91 23 0 chr20 8581902 8581946 -63571936 - L1M2 LINE L1 -4495 2354 2310 387 217 0 0 chr20 8582015 8582107 -63571775 + L1MA9 LINE L1 6216 6307 -5 284 291 45 18 chr20 8582114 8582224 -63571658 - MIR SINE MIR -148 114 2 187 382 45 27 chr20 8582909 8583129 -63570753 + L3 LINE CR1 939 1162 -415 438 313 27 27 chr20 8585579 8585726 -63568156 - MIR SINE MIR -80 182 36 503 185 0 0 chr20 8585868 8585949 -63567933 - Tigger5 DNA MER2_type -9 2314 2234 343 196 0 0 chr20 8585954 8586010 -63567872 - Tigger5 DNA MER2_type -2267 56 1 243 381 79 14 chr20 8586106 8586245 -63567637 - MIR3 SINE MIR -21 187 40 191 293 121 0 chr20 8586285 8586343 -63567539 - L2 LINE L2 -79 3193 3129 4941 179 27 19 chr20 8588091 8589559 -63564323 - L1MA9 LINE L1 -36 6276 4797 2207 110 0 3 chr20 8589559 8589851 -63564031 - AluSq SINE Alu -22 291 1 4941 179 27 19 chr20 8589851 8589924 -63563958 - L1MA9 LINE L1 -1515 4797 4726 928 127 15 0 chr20 8589926 8590060 -63563822 + AluJb SINE Alu 1 136 -176 5987 205 99 29 chr20 8590072 8590216 -63563666 + L1M2 LINE L1 3464 3597 -3251 1580 124 57 84 chr20 8590216 8590515 -63563367 + AluSg1 SINE Alu 1 291 -18 2203 105 0 7 chr20 8590515 8590810 -63563072 + AluSg SINE Alu 1 293 -17 5987 205 99 29 chr20 8590810 8592500 -63561382 + L1M2 LINE L1 3596 5426 -1422 267 267 17 8 chr20 8593600 8593720 -63560162 - L1MC4 LINE L1 0 8042 7922 1922 245 33 28 chr20 8593834 8594475 -63559407 - L1MC4 LINE L1 -195 7847 7204 294 109 0 0 chr20 8594505 8594551 -63559331 + L1MC4 LINE L1 7093 7138 -904 778 251 48 44 chr20 8594757 8595008 -63558874 - MIR SINE MIR -9 253 2 1177 133 0 0 chr20 8596293 8596459 -63557423 - AluSc SINE Alu -9 300 135 264 247 71 0 chr20 8596567 8596652 -63557230 + MLT1I LTR MaLR 319 409 0 852 133 58 111 chr20 8596720 8596945 -63556937 + MER20 DNA MER1_type 5 217 -2 320 331 68 40 chr20 8597252 8597400 -63556482 - MIR3 SINE MIR -41 167 16 289 298 174 0 chr20 8597756 8597877 -63556005 + MIR3 SINE MIR 22 163 -45 291 240 272 8 chr20 8597906 8598031 -63555851 - MIR SINE MIR 0 262 105 24 0 0 0 chr20 8599178 8599202 -63554680 + AT_rich Low_complexity Low_complexity 1 24 0 2418 56 10 3 chr20 8600628 8600930 -63552952 - AluY SINE Alu -7 304 1 321 351 30 8 chr20 8600944 8601075 -63552807 + MIR3 SINE MIR 32 165 -43 1190 244 19 22 chr20 8601551 8601870 -63552012 - MLT1I LTR MaLR -8 401 84 1046 209 113 30 chr20 8602276 8602611 -63551271 + MER34C LTR ERV1 1 363 -222 3208 160 68 19 chr20 8602701 8603333 -63550549 - LTR51 LTR ERV1 -8 663 1 292 223 21 32 chr20 8603406 8603500 -63550382 + MER34 LTR ERV1 448 540 -2 352 233 7 21 chr20 8603703 8603817 -63550065 - L1MC/D LINE L1 -810 5549 5435 25 0 0 0 chr20 8605193 8605218 -63548664 + AT_rich Low_complexity Low_complexity 1 25 0 340 330 9 0 chr20 8606601 8606713 -63547169 + MIR SINE MIR 69 181 -81 383 299 15 15 chr20 8606769 8606903 -63546979 + MLT1H LTR MaLR 29 162 -387 255 224 45 0 chr20 8607069 8607136 -63546746 + MLT1H LTR MaLR 479 548 -1 1961 173 14 66 chr20 8607449 8607872 -63546010 - MER57A LTR ERV1 -1 402 2 1566 206 87 11 chr20 8608806 8609353 -63544529 + L1ME3 LINE L1 5573 6162 0 1661 191 3 25 chr20 8610870 8611185 -63542697 - AluJo SINE Alu -4 308 1 448 313 102 12 chr20 8611351 8611517 -63542365 - MER5A DNA MER1_type -1 188 8 708 218 141 0 chr20 8613941 8614175 -63539707 + LTR50 LTR ERVL 8 274 -521 318 210 22 10 chr20 8614386 8614484 -63539398 + LTR50 LTR ERVL 425 795 0 2133 116 7 13 chr20 8614602 8614903 -63538979 - AluSx SINE Alu -13 299 1 697 197 104 6 chr20 8616167 8616350 -63537532 + LTR16C LTR ERVL 291 491 0 212 184 0 0 chr20 8617507 8617545 -63536337 + A-rich Low_complexity Low_complexity 1 38 0 2408 107 0 0 chr20 8618249 8618558 -63535324 + AluSq SINE Alu 1 309 -4 21 0 0 0 chr20 8619313 8619334 -63534548 + AT_rich Low_complexity Low_complexity 1 21 0 336 216 0 0 chr20 8619970 8620067 -63533815 + (GAATG)n Simple_repeat Simple_repeat 1 97 0 218 405 14 27 chr20 8622835 8622983 -63530899 + L2 LINE L2 3127 3272 0 287 308 26 8 chr20 8623375 8623492 -63530390 - MIR SINE MIR -33 229 111 329 308 8 8 chr20 8623606 8623723 -63530159 - MIR SINE MIR -33 229 113 449 251 64 55 chr20 8623766 8624092 -63529790 + HAL1b LINE L1 755 1083 -265 453 158 351 0 chr20 8624215 8624329 -63529553 + MER47A DNA MER2_type 1 154 -212 2024 112 6 139 chr20 8624329 8624949 -63528933 - MER1A DNA MER1_type 0 529 1 1019 161 55 46 chr20 8624949 8625086 -63528796 + MER47A DNA MER2_type 147 288 -2035 782 212 18 12 chr20 8625086 8625251 -63528631 - FRAM SINE Alu 0 166 1 1019 161 55 46 chr20 8625251 8625331 -63528551 + MER47A DNA MER2_type 288 366 0 2400 106 0 0 chr20 8627516 8627818 -63526064 - AluSq SINE Alu -11 302 1 290 390 102 0 chr20 8627889 8628007 -63525875 + MIR3 SINE MIR 30 159 -49 567 265 0 87 chr20 8630549 8630755 -63523127 + MER5A DNA MER1_type 4 189 0 367 313 28 40 chr20 8630762 8630938 -63522944 - MER5B DNA MER1_type 0 178 5 206 226 69 118 chr20 8631408 8631510 -63522372 - MIR SINE MIR -75 133 37 1830 216 67 38 chr20 8631536 8632058 -63521824 + MER90 LTR ERV1 1 537 -77 474 233 113 36 chr20 8632104 8632379 -63521503 - L1M1 LINE L1 -4294 3271 2976 356 275 46 38 chr20 8632776 8632907 -63520975 + MIR SINE MIR 4 135 -127 704 195 0 47 chr20 8633432 8633601 -63520281 + L1MB8 LINE L1 5852 6012 -166 211 364 73 9 chr20 8634017 8634127 -63519755 + L2 LINE L2 3180 3296 -17 1499 187 48 12 chr20 8634246 8634577 -63519305 + MER2 DNA MER2_type 2 344 0 572 240 169 0 chr20 8634769 8634923 -63518959 - MER5A DNA MER1_type 0 189 10 1725 183 7 3 chr20 8635076 8635385 -63518497 - AluJo SINE Alu 0 310 1 247 211 141 0 chr20 8635401 8635472 -63518410 + Charlie8 DNA MER1_type 88 168 -2249 1347 269 66 17 chr20 8636427 8636895 -63516987 - LTR16C LTR ERVL 0 491 1 612 280 71 31 chr20 8636995 8637220 -63516662 - L2 LINE L2 -259 3054 2821 565 285 206 22 chr20 8637887 8638164 -63515718 + L2 LINE L2 2302 2629 -685 604 310 74 23 chr20 8639332 8639684 -63514198 - L1ME3A LINE L1 -299 5871 5502 253 103 17 35 chr20 8639687 8639745 -63514137 + LTR66 LTR ERVL 381 437 -173 311 179 28 123 chr20 8639746 8639852 -63514030 - L1MC4 LINE L1 -1340 6702 6607 233 210 29 0 chr20 8639857 8639995 -63513887 + (TA)n Simple_repeat Simple_repeat 1 142 0 368 189 26 0 chr20 8640006 8640159 -63513723 + (TA)n Simple_repeat Simple_repeat 2 158 0 274 232 40 0 chr20 8640282 8640381 -63513501 - L1ME3A LINE L1 -802 5360 5258 646 297 88 24 chr20 8640492 8640903 -63512979 + MLT1J1 LTR MaLR 10 446 0 341 272 19 61 chr20 8641097 8641310 -63512572 - L1ME3A LINE L1 -1198 4948 4745 24 67 0 0 chr20 8641361 8641406 -63512476 + AT_rich Low_complexity Low_complexity 1 45 0 547 237 43 27 chr20 8641409 8641606 -63512276 + MER6 DNA MER2_type -65 864 -1 3115 167 28 31 chr20 8641607 8642279 -63511603 - L1MA6 LINE L1 -29 6271 5602 * 5845 129 18 4 chr20 8642277 8643765 -63510117 - L1PB1 LINE L1 0 6151 4644 4962 230 18 2 chr20 8643760 8644945 -63508937 - L1PB1 LINE L1 -2400 3746 2543 * 1471 124 35 86 chr20 8644952 8645300 -63508582 - L1MA6 LINE L1 -691 5609 5280 5438 173 14 8 chr20 8645348 8646419 -63507463 - L1MA6 LINE L1 -841 5305 4229 377 283 87 6 chr20 8646464 8646637 -63507245 - L1ME3A LINE L1 -1603 4543 4357 811 214 58 0 chr20 8646906 8647079 -63506803 - MER5A DNA MER1_type -6 183 1 1031 169 0 0 chr20 8647702 8647874 -63506008 + AluJb SINE Alu 137 308 -4 846 320 147 41 chr20 8650833 8651147 -63502735 + L3 LINE CR1 768 1047 -530 1686 194 0 3 chr20 8651147 8651431 -63502451 + AluJb SINE Alu 2 284 -28 846 320 147 41 chr20 8651431 8651776 -63502106 + L3 LINE CR1 1047 1497 -80 5229 61 7 5 chr20 8652147 8652821 -63501061 + L1PA8 LINE L1 5483 6158 -14 335 248 197 15 chr20 8652992 8653129 -63500753 - MIR SINE MIR -89 173 12 1602 186 73 37 chr20 8653201 8653583 -63500299 + MSTD LTR MaLR 1 396 0 1295 240 109 40 chr20 8654582 8654986 -63498896 + LTR16A1 LTR ERVL 2 433 -24 192 40 0 0 chr20 8656235 8656260 -63497622 + (TTA)n Simple_repeat Simple_repeat 2 26 0 444 279 9 0 chr20 8656353 8656464 -63497418 - MIR SINE MIR -2 260 149 517 274 55 0 chr20 8656483 8656629 -63497253 - MER5A DNA MER1_type -4 185 32 182 302 0 0 chr20 8656698 8656741 -63497141 + L2 LINE L2 3222 3264 -8 220 236 111 14 chr20 8656742 8656814 -63497068 - MIR SINE MIR -121 141 63 189 171 0 0 chr20 8656923 8656958 -63496924 - MER5B DNA MER1_type 0 178 144 572 246 33 0 chr20 8657008 8657130 -63496752 - MER5B DNA MER1_type -42 136 11 2150 121 12 21 chr20 8657151 8657490 -63496392 - MER1B DNA MER1_type 0 337 2 1210 175 5 9 chr20 8657654 8657865 -63496017 + MER6B DNA MER2_type 1 210 0 192 40 0 0 chr20 8658542 8658567 -63495315 + (CA)n Simple_repeat Simple_repeat 2 26 0 38 22 0 0 chr20 8658586 8658631 -63495251 + AT_rich Low_complexity Low_complexity 1 45 0 191 156 44 0 chr20 8659492 8659537 -63494345 + GA-rich Low_complexity Low_complexity 4 50 0 2400 76 0 16 chr20 8660912 8661226 -63492656 + AluY SINE Alu 1 309 -2 2263 157 60 26 chr20 8661613 8662065 -63491817 + MLT1C LTR MaLR 1 467 0 369 290 83 0 chr20 8663356 8663501 -63490381 + MIR3 SINE MIR 24 180 -28 343 307 56 22 chr20 8663730 8663909 -63489973 + L1ME4a LINE L1 5935 6119 -2 1090 219 108 23 chr20 8664070 8664458 -63489424 - L1MB8 LINE L1 0 6178 5758 32 43 0 0 chr20 8664467 8664513 -63489369 + AT_rich Low_complexity Low_complexity 1 46 0 1176 204 89 15 chr20 8664604 8664873 -63489009 + MLT1F LTR MaLR 254 542 0 2998 149 6 23 chr20 8665197 8665721 -63488161 - L1PA16 LINE L1 0 6166 5652 299 270 70 43 chr20 8665903 8666088 -63487794 + L1 LINE L1 4801 4990 -1156 517 252 56 131 chr20 8667184 8668097 -63485785 - L1MB8 LINE L1 -1160 4986 4143 300 271 93 55 chr20 8668106 8668224 -63485658 - L1MEd LINE L1 -3969 2341 2229 601 222 60 0 chr20 8668224 8668341 -63485541 - FLAM_A SINE Alu -8 125 2 300 271 93 55 chr20 8668341 8668458 -63485424 - L1MEd LINE L1 -4081 2229 2097 666 269 34 21 chr20 8668887 8669317 -63484565 - L1MEd LINE L1 -4786 1524 1050 21 36 0 0 chr20 8669679 8669707 -63484175 + AT_rich Low_complexity Low_complexity 1 28 0 1913 261 85 46 chr20 8669720 8670722 -63483160 + L1MEc LINE L1 1308 2348 -4048 206 324 165 11 chr20 8672867 8673043 -63480839 + L2 LINE L2 3111 3313 0 1020 186 46 0 chr20 8673184 8673378 -63480504 - MER3 DNA MER1_type -1 208 6 1609 40 25 0 chr20 8673601 8673800 -63480082 + L1PA4 LINE L1 5950 6153 -2 9085 103 7 15 chr20 8673943 8674560 -63479322 + HSMAR1 DNA Mariner 1 622 -665 2438 85 0 0 chr20 8674560 8674867 -63479015 - AluSx SINE Alu -5 307 1 9085 103 7 15 chr20 8674867 8675545 -63478337 + HSMAR1 DNA Mariner 622 1285 -2 476 223 18 6 chr20 8676258 8676424 -63477458 + GA-rich Low_complexity Low_complexity 2 169 0 211 200 54 23 chr20 8676444 8676574 -63477308 + GA-rich Low_complexity Low_complexity 2 135 0 210 235 20 10 chr20 8676589 8676687 -63477195 + (TA)n Simple_repeat Simple_repeat 1 99 0 21 36 0 0 chr20 8677335 8677363 -63476519 + AT_rich Low_complexity Low_complexity 1 28 0 2090 128 13 0 chr20 8677537 8677841 -63476041 - AluSx SINE Alu -4 308 1 24 0 0 0 chr20 8678163 8678187 -63475695 + AT_rich Low_complexity Low_complexity 1 24 0 2297 106 0 0 chr20 8678194 8678495 -63475387 + AluSq SINE Alu 1 301 -12 619 325 71 27 chr20 8678716 8679347 -63474535 - L1MEd LINE L1 -838 1652 907 240 303 121 0 chr20 8680025 8680124 -63473758 - L2 LINE L2 -4 3309 3199 1905 135 32 29 chr20 8680153 8680464 -63473418 + AluSx SINE Alu 1 312 0 198 283 0 38 chr20 8681603 8681656 -63472226 - L2 LINE L2 -16 3297 3247 25 51 0 0 chr20 8681971 8682010 -63471872 + AT_rich Low_complexity Low_complexity 1 39 0 553 138 7 48 chr20 8682637 8682782 -63471100 + GA-rich Low_complexity Low_complexity 3 141 0 400 373 122 8 chr20 8683637 8683900 -63469982 + L2 LINE L2 2976 3268 -4 392 275 64 52 chr20 8684028 8684261 -63469621 - MLT1L LTR MaLR -203 412 177 273 372 0 31 chr20 8685961 8686090 -63467792 + MER5A DNA MER1_type 15 139 -50 309 223 223 0 chr20 8686312 8686415 -63467467 - Charlie4 DNA MER1_type -18 1943 1818 236 254 110 17 chr20 8686681 8686799 -63467083 + L2 LINE L2 1634 1762 -1552 23 54 0 0 chr20 8687553 8687590 -63466292 + AT_rich Low_complexity Low_complexity 1 37 0 262 222 74 25 chr20 8687649 8687730 -63466152 - L2 LINE L2 0 3272 3188 2550 110 6 14 chr20 8687749 8688114 -63465768 + THE1B LTR MaLR 1 362 -2 2243 102 7 0 chr20 8688913 8689206 -63464676 + AluSq SINE Alu 5 299 -14 324 241 9 89 chr20 8689303 8689415 -63464467 - L2 LINE L2 -8 3264 3162 393 301 16 59 chr20 8689462 8689587 -63464295 - MER5B DNA MER1_type 0 178 62 2318 114 0 0 chr20 8689587 8689894 -63463988 - AluSx SINE Alu -5 307 1 393 301 16 59 chr20 8689894 8689954 -63463928 - MER5B DNA MER1_type -116 62 1 264 246 0 18 chr20 8690940 8690997 -63462885 - MIR3 SINE MIR -2 206 151 263 250 125 29 chr20 8691205 8691309 -63462573 - MIR SINE MIR -65 143 30 470 234 22 87 chr20 8692051 8692235 -63461647 + MIR SINE MIR 68 239 -23 438 313 39 17 chr20 8692436 8692615 -63461267 - MIR3 SINE MIR -6 202 20 527 77 0 13 chr20 8692628 8692706 -63461176 + (GGAA)n Simple_repeat Simple_repeat 2 78 0 1068 114 0 0 chr20 8692710 8692877 -63461005 + (GGGA)n Simple_repeat Simple_repeat 4 170 0 3013 256 96 32 chr20 8693247 8694374 -63459508 + MER69B DNA AcHobo 28 1226 0 352 226 31 54 chr20 8695827 8696007 -63457875 + L1ME1 LINE L1 5790 5976 -194 900 288 140 11 chr20 8697214 8697672 -63456210 + LTR33A LTR ERVL 7 523 0 1134 266 91 23 chr20 8698414 8698853 -63455029 + LTR33A LTR ERVL 55 523 0 37 52 0 0 chr20 8701415 8701473 -63452409 + AT_rich Low_complexity Low_complexity 1 58 0 3135 219 20 58 chr20 8701473 8702628 -63451254 - L1ME1 LINE L1 -24 6142 5032 336 166 108 70 chr20 8702646 8702803 -63451079 - MER63 DNA MER1_type -840 221 59 259 238 48 0 chr20 8702851 8702914 -63450968 - MER63 DNA MER1_type -994 67 2 440 344 36 36 chr20 8702944 8703194 -63450688 + MIR SINE MIR 12 261 -1 717 307 116 16 chr20 8704459 8704837 -63449045 - L3 LINE CR1 -486 1091 676 902 288 148 30 chr20 8704857 8705350 -63448532 + MLT1K LTR MaLR 32 582 -6 377 298 173 13 chr20 8705350 8705575 -63448307 - L3 LINE CR1 -899 678 418 273 373 84 31 chr20 8706041 8706266 -63447616 - L3 LINE CR1 -1278 299 63 1719 190 40 3 chr20 8706429 8706729 -63447153 + AluJb SINE Alu 1 311 -1 1032 254 5 5 chr20 8707952 8708176 -63445706 - MER58A DNA MER1_type 0 224 1 4228 167 80 19 chr20 8708443 8709256 -63444626 + MER21B LTR ERV1 1 863 0 597 234 179 33 chr20 8709545 8709818 -63444064 + MLT1J2 LTR MaLR 138 450 0 524 250 172 64 chr20 8711156 8711592 -63442290 + MLT1H1 LTR MaLR 60 542 -13 285 262 87 19 chr20 8711632 8711735 -63442147 + MIR SINE MIR 105 214 -48 1555 228 38 14 chr20 8712074 8712499 -63441383 + MER63B DNA MER1_type 1 435 -1 232 222 37 25 chr20 8712622 8712703 -63441179 - MIR SINE MIR -97 165 84 517 275 83 36 chr20 8712781 8712974 -63440908 - MIR SINE MIR -39 223 22 565 223 29 7 chr20 8712983 8713122 -63440760 - Charlie8 DNA MER1_type -2181 236 95 329 286 40 31 chr20 8713126 8713353 -63440529 - L1MEd LINE L1 -4916 1203 975 762 246 16 5 chr20 8713395 8713582 -63440300 - MER5A DNA MER1_type 0 189 1 306 293 0 9 chr20 8713779 8713885 -63439997 + (TA)n Simple_repeat Simple_repeat 1 105 0 844 110 14 2 chr20 8714792 8714940 -63438942 + L1P5 LINE L1 5659 5811 -340 256 259 12 0 chr20 8715452 8715533 -63438349 - MLT1I LTR MaLR 0 409 328 499 271 41 106 chr20 8715725 8716065 -63437817 + MLT1H LTR MaLR 228 545 -4 479 149 0 11 chr20 8716066 8716160 -63437722 + (GGAA)n Simple_repeat Simple_repeat 3 95 0 352 90 39 26 chr20 8716169 8716247 -63437635 + A-rich Low_complexity Low_complexity 5 83 0 1702 128 8 4 chr20 8716248 8716505 -63437377 + AluSg SINE Alu 45 302 -8 1726 127 41 4 chr20 8716510 8716777 -63437105 + AluSp SINE Alu 36 312 -1 210 225 0 0 chr20 8716778 8716818 -63437064 + GA-rich Low_complexity Low_complexity 1 40 0 2390 93 3 0 chr20 8716873 8717185 -63436697 - AluSp SINE Alu 0 313 1 23 33 0 0 chr20 8717327 8717357 -63436525 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr20 8717401 8717424 -63436458 + AT_rich Low_complexity Low_complexity 1 23 0 186 189 0 0 chr20 8717715 8717752 -63436130 + (TATG)n Simple_repeat Simple_repeat 2 38 0 5964 134 25 4 chr20 8718248 8719371 -63434511 - L1MA2 LINE L1 0 6304 5162 640 296 40 36 chr20 8719372 8719619 -63434263 - MIR SINE MIR -6 256 9 1221 184 12 34 chr20 8719885 8720211 -63433671 + MER33 DNA MER1_type 6 324 0 540 205 27 7 chr20 8720434 8720736 -63433146 + CT-rich Low_complexity Low_complexity 1 308 0 756 232 62 0 chr20 8720780 8720957 -63432925 + MER63B DNA MER1_type 15 202 -234 1127 212 76 68 chr20 8720957 8721311 -63432571 + MSTD LTR MaLR 1 357 -39 1792 103 0 103 chr20 8721313 8721623 -63432259 + AluSx SINE Alu 1 278 -34 1046 85 23 17 chr20 8721631 8721652 -63432230 + (GAAA)n Simple_repeat Simple_repeat 1 199 0 1046 85 23 17 chr20 8721652 8721829 -63432053 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 275 146 0 0 chr20 8721979 8722027 -63431855 + MSTD LTR MaLR 410 457 0 * 907 169 68 42 chr20 8722027 8722260 -63431622 + MER63B DNA MER1_type 196 434 0 311 0 26 0 chr20 8722306 8722345 -63431537 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 632 313 141 18 chr20 8722402 8722686 -63431196 - L3b LINE CR1 -8 1575 1257 337 300 64 34 chr20 8724066 8724299 -63429583 + Charlie8 DNA MER1_type 2 241 -2176 379 339 40 11 chr20 8725020 8725197 -63428685 - HAL1b LINE L1 -6 1342 1161 858 234 196 44 chr20 8725206 8725792 -63428090 - HAL1b LINE L1 -161 1187 513 180 268 0 0 chr20 8725801 8725872 -63428010 + (TG)n Simple_repeat Simple_repeat 1 71 0 388 293 107 21 chr20 8725872 8726114 -63427768 - HAL1b LINE L1 -841 507 245 534 194 10 19 chr20 8726133 8726236 -63427646 - MIR SINE MIR -133 129 28 198 323 15 0 chr20 8726943 8727008 -63426874 - MIR3 SINE MIR -25 183 118 1184 250 69 37 chr20 8727117 8727553 -63426329 + LTR16A1 LTR ERVL 2 451 -6 367 314 8 0 chr20 8728707 8728825 -63425057 - MLT1I LTR MaLR -3 406 288 883 38 0 0 chr20 8728867 8728972 -63424910 - AluSc SINE Alu -177 132 28 1359 113 0 0 chr20 8728972 8729158 -63424724 + AluSc SINE Alu 124 309 0 238 298 149 0 chr20 8729177 8729271 -63424611 - MLT1I LTR MaLR -192 217 110 260 295 0 0 chr20 8729378 8729439 -63424443 - L2 LINE L2 -1 3312 3252 768 211 165 8 chr20 8729641 8729902 -63423980 - MER33 DNA MER1_type 0 324 23 234 0 0 0 chr20 8729974 8730000 -63423882 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 303 226 24 95 chr20 8732314 8732398 -63421484 - MER5A DNA MER1_type -103 86 9 227 304 51 0 chr20 8733148 8733227 -63420655 + MIR SINE MIR 124 206 -56 338 303 40 10 chr20 8734648 8734747 -63419135 + L2 LINE L2 3212 3313 0 794 173 4 169 chr20 8734770 8734841 -63419041 + MER5A DNA MER1_type 1 82 -107 667 229 15 0 chr20 8734841 8734972 -63418910 + FLAM_A SINE Alu 1 133 0 794 173 4 169 chr20 8734972 8735125 -63418757 + MER5A DNA MER1_type 82 188 -1 410 277 16 54 chr20 8735134 8735318 -63418564 - MER5B DNA MER1_type 0 178 2 577 216 170 7 chr20 8735484 8735637 -63418245 + MER5A DNA MER1_type 10 187 -2 642 304 100 17 chr20 8735964 8736194 -63417688 - MIR SINE MIR -11 251 3 2249 106 50 9 chr20 8737245 8737586 -63416296 - THE1A LTR MaLR 0 355 1 367 362 40 20 chr20 8737817 8737969 -63415913 + MER5A DNA MER1_type 35 189 0 261 363 40 24 chr20 8737982 8738106 -63415776 + MIR SINE MIR 17 142 -66 240 35 0 0 chr20 8738536 8738565 -63415317 + (CTATA)n Simple_repeat Simple_repeat 5 33 0 865 211 47 86 chr20 8738566 8738950 -63414932 - L1MC4 LINE L1 -159 7883 7515 524 305 90 11 chr20 8739386 8739563 -63414319 + MIR3 SINE MIR 7 197 -11 986 201 12 0 chr20 8740312 8740481 -63413401 + AluJb SINE Alu 134 304 -8 531 175 0 28 chr20 8741238 8741381 -63412501 + CT-rich Low_complexity Low_complexity 4 142 0 1022 177 16 0 chr20 8741799 8741991 -63411891 - MLT1D LTR MaLR 0 505 311 771 276 20 5 chr20 8741991 8742190 -63411692 - MIR SINE MIR -50 212 11 189 0 0 0 chr20 8742952 8742973 -63410909 + (TA)n Simple_repeat Simple_repeat 2 22 0 363 78 0 0 chr20 8742973 8743024 -63410858 + (CA)n Simple_repeat Simple_repeat 2 52 0 371 186 137 8 chr20 8744213 8744337 -63409545 + L2 LINE L2 2549 2688 -626 453 36 0 0 chr20 8745103 8745158 -63408724 + (CCTA)n Simple_repeat Simple_repeat 1 55 0 1006 273 104 9 chr20 8745477 8745997 -63407885 + L2 LINE L2 2504 3079 -234 863 301 139 29 chr20 8746406 8746815 -63407067 + MER115 DNA AcHobo 1 454 -239 184 204 41 0 chr20 8747515 8747564 -63406318 + L3 LINE CR1 1513 1563 -14 1583 269 20 3 chr20 8748376 8748718 -63405164 - LTR16C LTR ERVL 0 491 144 180 0 0 0 chr20 8748732 8748752 -63405130 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 23 86 0 0 chr20 8748760 8748818 -63405064 + AT_rich Low_complexity Low_complexity 1 58 0 370 267 62 41 chr20 8749329 8749475 -63404407 - MIR SINE MIR -34 228 80 495 269 90 39 chr20 8749666 8749900 -63403982 - L1ME3A LINE L1 -11 6159 5914 852 222 97 0 chr20 8749908 8750115 -63403767 - L1ME3A LINE L1 -301 5869 5643 324 301 9 0 chr20 8750124 8750237 -63403645 + (TATATG)n Simple_repeat Simple_repeat 6 119 0 842 174 12 76 chr20 8750880 8751052 -63402830 - MER5A DNA MER1_type -21 168 8 370 223 62 111 chr20 8752201 8752457 -63401425 - MIR SINE MIR -6 256 12 190 344 104 21 chr20 8752646 8752742 -63401140 + MIR3 SINE MIR 2 105 -103 316 290 76 124 chr20 8752768 8753123 -63400759 - L2 LINE L2 0 3272 2935 429 403 35 0 chr20 8753168 8753394 -63400488 - L2 LINE L2 -501 2813 2580 297 327 58 10 chr20 8753534 8753638 -63400244 + L2 LINE L2 3164 3272 0 201 318 143 26 chr20 8753654 8753808 -63400074 - L2 LINE L2 -841 2473 2302 260 313 57 68 chr20 8753954 8754146 -63399736 - L2 LINE L2 -4 3309 3120 313 354 89 46 chr20 8754214 8754516 -63399366 - L2 LINE L2 -363 2951 2637 273 119 0 0 chr20 8754628 8754670 -63399212 + (TA)n Simple_repeat Simple_repeat 1 42 0 305 299 107 16 chr20 8754862 8755049 -63398833 - L1M4c LINE L1 -3894 2646 2443 275 254 67 12 chr20 8755421 8755567 -63398315 - L1M4c LINE L1 -869 2032 1674 250 290 58 0 chr20 8755897 8755966 -63397916 - MIR3 SINE MIR -127 81 9 6402 182 32 14 chr20 8756300 8758505 -63395377 - L1PA16 LINE L1 -3 6163 3919 3025 228 30 16 chr20 8758504 8759260 -63394622 + L1PA16 LINE L1 3166 3932 -2214 * 1229 281 94 2 chr20 8759598 8760003 -63393879 + L2 LINE L2 2536 2977 -337 1208 186 60 116 chr20 8760009 8760390 -63393492 + MLT1A1 LTR MaLR 6 365 0 222 311 14 0 chr20 8760390 8760464 -63393418 + L2 LINE L2 2973 3047 -266 278 122 0 0 chr20 8760577 8760618 -63393264 + L2 LINE L2 3268 3308 -5 276 313 188 0 chr20 8760643 8760771 -63393111 - MIR SINE MIR -37 225 74 1347 233 106 45 chr20 8763095 8763520 -63390362 - LTR16A1 LTR ERVL -1 456 6 203 385 0 15 chr20 8763564 8763629 -63390253 - L2 LINE L2 -214 3058 2995 477 0 0 0 chr20 8763660 8763713 -63390169 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 309 276 43 13 chr20 8763878 8764081 -63389801 + MLT1J2 LTR MaLR 85 327 -123 710 326 19 23 chr20 8766357 8766527 -63387355 - LTR16C LTR ERVL -2 489 319 3273 140 42 58 chr20 8766527 8767171 -63386711 + MER51A LTR ERV1 1 634 0 710 326 19 23 chr20 8767171 8767310 -63386572 - LTR16C LTR ERVL -172 319 181 233 222 22 0 chr20 8767580 8767625 -63386257 + MER77 LTR ERV1 199 244 -361 1639 230 23 4 chr20 8767855 8768219 -63385663 - MER77 LTR ERV1 -37 536 196 218 56 28 0 chr20 8768332 8768368 -63385514 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 706 200 72 48 chr20 8768672 8768922 -63384960 - MER33 DNA MER1_type -22 302 47 305 267 86 0 chr20 8769191 8769296 -63384586 - MIR SINE MIR -109 153 40 890 182 47 6 chr20 8770095 8770265 -63383617 - MER5B DNA MER1_type -1 177 1 504 297 29 0 chr20 8770951 8771089 -63382793 - MIR SINE MIR -95 167 26 778 266 101 0 chr20 8771184 8771402 -63382480 - LTR16A LTR ERVL -67 383 144 6194 189 66 9 chr20 8771839 8774463 -63379419 + L1MC1 LINE L1 3550 6326 -7 577 258 6 24 chr20 8775149 8775161 -63378721 - L1MA10 LINE L1 -2 6332 6321 445 269 21 59 chr20 8775161 8775241 -63378641 - L1ME1 LINE L1 -5 6161 6080 1503 183 115 3 chr20 8775241 8775553 -63378329 - MER7A DNA MER2_type -1 345 1 445 269 21 59 chr20 8775553 8775658 -63378224 - L1ME1 LINE L1 -86 6080 5983 1093 240 57 0 chr20 8775673 8775952 -63377930 - L1ME1 LINE L1 -277 5889 5595 24 32 0 0 chr20 8776272 8776303 -63377579 + AT_rich Low_complexity Low_complexity 1 31 0 9705 222 48 36 chr20 8777049 8778424 -63375458 - L1MB8 LINE L1 -18 6229 4871 297 0 0 0 chr20 8778424 8778457 -63375425 + (GA)n Simple_repeat Simple_repeat 2 34 0 9705 222 48 36 chr20 8778457 8780802 -63373080 - L1MB8 LINE L1 -1376 4871 2505 2567 93 8 3 chr20 8780802 8781155 -63372727 - THE1A LTR MaLR 0 355 1 9705 222 48 36 chr20 8781155 8781493 -63372389 - L1MB8 LINE L1 -3742 2505 2172 920 133 0 13 chr20 8781497 8781648 -63372234 - L1MA10 LINE L1 -10 6324 6176 1291 173 27 0 chr20 8781658 8781947 -63371935 - L1MB1 LINE L1 -70 6119 5782 864 232 0 77 chr20 8781947 8782154 -63371728 - MER8 DNA MER2_type 0 239 49 961 181 135 46 chr20 8782160 8782463 -63371419 - L1MB8 LINE L1 -1 6177 5848 * 4052 180 30 82 chr20 8782460 8783583 -63370299 + L1MB3 LINE L1 4871 5905 -278 234 0 0 0 chr20 8783583 8783609 -63370273 + (CA)n Simple_repeat Simple_repeat 1 26 0 4052 180 30 82 chr20 8783609 8783874 -63370008 + L1MB3 LINE L1 5905 6182 -1 1782 183 36 3 chr20 8784242 8784575 -63369307 - MER2 DNA MER2_type 0 344 1 330 227 191 4 chr20 8784827 8785052 -63368830 + HAL1 LINE L1 996 1262 -1245 404 294 128 38 chr20 8785151 8785386 -63368496 - HAL1 LINE L1 -1139 1368 1113 28 29 0 0 chr20 8786439 8786474 -63367408 + AT_rich Low_complexity Low_complexity 1 35 0 642 251 88 100 chr20 8786520 8787022 -63366860 - MLT1J LTR MaLR -3 508 13 376 337 30 24 chr20 8787142 8787355 -63366527 - MIR SINE MIR -13 249 37 2217 120 3 3 chr20 8787530 8787838 -63366044 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr20 8789240 8789262 -63364620 + AT_rich Low_complexity Low_complexity 1 22 0 6341 210 83 19 chr20 8789637 8791050 -63362832 + L1ME LINE L1 18 1520 -5339 349 258 143 48 chr20 8791160 8791369 -63362513 + HAL1b LINE L1 57 285 -1063 25 31 0 0 chr20 8791496 8791528 -63362354 + AT_rich Low_complexity Low_complexity 1 32 0 2463 185 38 20 chr20 8791572 8792496 -63361386 + L1ME LINE L1 5595 6533 -452 204 319 44 11 chr20 8792507 8792598 -63361284 + MIR3 SINE MIR 111 204 -4 197 148 17 43 chr20 8793101 8793216 -63360666 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 1537 148 30 23 chr20 8795056 8795360 -63358522 - L1MB8 LINE L1 -17 6161 5856 529 214 48 8 chr20 8795361 8795487 -63358395 - Charlie8 DNA MER1_type -2214 203 73 14582 137 22 9 chr20 8796348 8798736 -63355146 + Tigger1 DNA MER2_type 1 2418 0 239 331 101 14 chr20 8800328 8800476 -63353406 + MIR3 SINE MIR 44 204 -4 21 0 0 0 chr20 8800655 8800676 -63353206 + AT_rich Low_complexity Low_complexity 1 21 0 312 263 120 87 chr20 8801341 8801790 -63352092 + MLT1J LTR MaLR 6 469 -42 2217 120 73 15 chr20 8802517 8802859 -63351023 - THE1B LTR MaLR -2 362 1 1946 153 0 25 chr20 8803078 8803398 -63350484 - AluJb SINE Alu 0 312 1 6392 68 0 0 chr20 8803443 8804296 -63349586 - L1PA6 LINE L1 0 6154 5302 1854 97 0 0 chr20 8804294 8804583 -63349299 + L1PA6 LINE L1 5014 5302 -844 * 367 324 200 0 chr20 8805269 8805414 -63348468 + MER5A DNA MER1_type 16 189 0 2076 139 3 3 chr20 8806733 8807043 -63346839 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr20 8807071 8807093 -63346789 + AT_rich Low_complexity Low_complexity 1 22 0 653 214 26 0 chr20 8807456 8807610 -63346272 - MER45A DNA AcHobo 0 178 21 460 310 150 9 chr20 8807746 8807959 -63345923 + MIR SINE MIR 20 262 0 249 253 35 0 chr20 8807987 8808074 -63345808 + L1ME LINE L1 6527 6616 -316 546 278 74 0 chr20 8808118 8808294 -63345588 + MER5A DNA MER1_type 1 189 0 339 25 0 0 chr20 8810062 8810102 -63343780 + (CA)n Simple_repeat Simple_repeat 1 40 0 1445 224 78 28 chr20 8810184 8810657 -63343225 - L1MB8 LINE L1 -2 6987 6491 4525 171 21 12 chr20 8810666 8811317 -63342565 + L1MB3 LINE L1 4944 5618 -565 2456 34 0 7 chr20 8811317 8811612 -63342270 + AluY SINE Alu 1 293 -18 4525 171 21 12 chr20 8811612 8812183 -63341699 + L1MB3 LINE L1 5618 6182 -1 2691 237 33 26 chr20 8812310 8812657 -63341225 - L1MB8 LINE L1 -492 6497 6154 1862 89 0 63 chr20 8812657 8812928 -63340954 - AluSq SINE Alu -16 297 44 2691 237 33 26 chr20 8812928 8813683 -63340199 - L1MB8 LINE L1 -835 6154 5372 349 211 10 19 chr20 8813820 8813924 -63339958 + (CATATA)n Simple_repeat Simple_repeat 5 107 0 1782 247 56 79 chr20 8814102 8814944 -63338938 - L1MB8 LINE L1 -4566 2393 1583 2061 119 58 0 chr20 8814944 8815239 -63338643 - AluSx SINE Alu 0 312 1 1782 247 56 79 chr20 8815239 8815625 -63338257 - L1MB8 LINE L1 -5376 1583 1190 373 336 112 20 chr20 8815697 8815992 -63337890 - L1MB8 LINE L1 -5672 1183 862 244 308 17 8 chr20 8816250 8816370 -63337512 - L1MB8 LINE L1 -6647 212 92 231 267 0 0 chr20 8816566 8816611 -63337271 + MIR SINE MIR 33 77 -131 239 337 49 34 chr20 8817053 8817093 -63336789 + MIR SINE MIR 53 91 -171 2377 104 3 0 chr20 8817093 8817402 -63336480 - AluSp SINE Alu -3 310 1 239 337 49 34 chr20 8817402 8817566 -63336316 + MIR SINE MIR 91 260 -2 2198 132 0 0 chr20 8817705 8818015 -63335867 + AluSx SINE Alu 1 310 -2 500 152 10 0 chr20 8818015 8818114 -63335768 + GA-rich Low_complexity Low_complexity 1 100 0 234 247 151 32 chr20 8819118 8819211 -63334671 - MER5A DNA MER1_type -80 109 6 364 321 28 0 chr20 8819249 8819355 -63334527 + L2 LINE L2 3197 3305 -8 2249 171 44 2 chr20 8821512 8821921 -63331961 + MSTB LTR MaLR 1 426 0 2951 208 101 36 chr20 8822437 8823917 -63329965 + L1MD2 LINE L1 16 1897 -4643 2474 218 29 14 chr20 8823952 8824682 -63329200 + L1MD2 LINE L1 4411 5151 -1389 721 182 0 0 chr20 8824723 8824844 -63329038 - FLAM_C SINE Alu -22 121 1 2979 205 107 41 chr20 8824850 8826287 -63327595 + L1MD2 LINE L1 5162 6684 -69 1306 307 126 45 chr20 8826366 8827376 -63326506 + L2 LINE L2 1536 2626 -688 1144 194 227 102 chr20 8827377 8827442 -63326440 - MLT1E1 LTR MaLR 0 654 599 2109 133 0 13 chr20 8827442 8827744 -63326138 - AluSx SINE Alu -14 298 1 1144 194 227 102 chr20 8827744 8828259 -63325623 - MLT1E1 LTR MaLR -55 599 1 262 300 149 49 chr20 8828259 8828650 -63325232 + L2 LINE L2 2623 3062 -210 2079 196 24 15 chr20 8829923 8830378 -63323504 - MER65C LTR ERV1 0 461 3 1845 212 99 38 chr20 8830391 8830925 -63322957 + MLT1F1 LTR MaLR 1 567 0 360 339 22 17 chr20 8830982 8831173 -63322709 - MIR SINE MIR -56 206 17 1507 163 16 6 chr20 8831378 8831691 -63322191 - MER33 DNA MER1_type -3 321 6 2466 51 0 26 chr20 8833289 8833602 -63320280 + AluY SINE Alu 1 305 -6 2398 64 0 20 chr20 8834601 8834898 -63318984 + AluY SINE Alu 1 291 -20 225 254 0 0 chr20 8834940 8835011 -63318871 + (TA)n Simple_repeat Simple_repeat 2 72 0 207 0 0 0 chr20 8836005 8836028 -63317854 + (T)n Simple_repeat Simple_repeat 1 23 0 252 143 0 0 chr20 8836347 8836389 -63317493 + (TG)n Simple_repeat Simple_repeat 2 43 0 192 231 0 0 chr20 8837138 8837190 -63316692 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 496 228 25 122 chr20 8838129 8838326 -63315556 + MER5A DNA MER1_type 4 181 -8 261 0 0 0 chr20 8838534 8838563 -63315319 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 21 57 0 0 chr20 8839436 8839471 -63314411 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr20 8841745 8841773 -63312109 + (TA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr20 8843516 8843545 -63310337 + AT_rich Low_complexity Low_complexity 1 29 0 383 279 137 12 chr20 8844173 8844334 -63309548 - MER5A DNA MER1_type 0 189 9 240 217 72 14 chr20 8845216 8845285 -63308597 + MER116 DNA Mariner 3 75 -5 519 246 87 0 chr20 8846145 8846271 -63307611 - MIR SINE MIR -54 208 72 1948 161 3 3 chr20 8846322 8846633 -63307249 - AluSx SINE Alu -1 311 1 180 0 0 0 chr20 8846993 8847013 -63306869 + (CAA)n Simple_repeat Simple_repeat 2 21 0 324 0 0 0 chr20 8851228 8851264 -63302618 + (CA)n Simple_repeat Simple_repeat 2 37 0 209 57 29 0 chr20 8851701 8851736 -63302146 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 213 39 0 0 chr20 8853166 8853192 -63300690 + (CGG)n Simple_repeat Simple_repeat 1 26 0 36 53 0 0 chr20 8853330 8853387 -63300495 + GC_rich Low_complexity Low_complexity 1 57 0 189 0 0 0 chr20 8853573 8853594 -63300288 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 399 313 0 17 chr20 8853713 8853892 -63299990 + (TA)n Simple_repeat Simple_repeat 2 177 0 180 0 0 0 chr20 8854874 8854894 -63298988 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 222 37 0 0 chr20 8855263 8855290 -63298592 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 207 300 71 14 chr20 8856463 8856533 -63297349 + MIR SINE MIR 38 111 -97 203 146 24 0 chr20 8856712 8856753 -63297129 + CT-rich Low_complexity Low_complexity 1 42 0 2061 133 59 19 chr20 8856825 8857149 -63296733 - MER1B DNA MER1_type 0 337 1 216 292 45 22 chr20 8857175 8857264 -63296618 + MIR SINE MIR 117 207 -55 241 290 65 38 chr20 8857826 8858012 -63295870 - L2 LINE L2 -3 3310 3120 426 291 64 21 chr20 8858089 8858230 -63295652 - MIR SINE MIR -108 154 8 339 309 114 30 chr20 8858393 8858707 -63295175 - LTR33 LTR ERVL -11 510 119 1983 216 189 6 chr20 8858713 8859242 -63294640 - MLT1E1 LTR MaLR 0 654 29 216 0 0 0 chr20 8859709 8859733 -63294149 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1719 41 0 0 chr20 8860817 8861014 -63292868 - L1PA5 LINE L1 0 6154 5958 348 264 56 32 chr20 8861500 8861625 -63292257 + MER94 DNA DNA 7 134 0 596 290 116 1 chr20 8862991 8863369 -63290513 + LTR16C LTR ERVL 34 483 -8 482 304 30 38 chr20 8863621 8863858 -63290024 - L2 LINE L2 -183 3089 2855 250 192 13 13 chr20 8864970 8865048 -63288834 + GA-rich Low_complexity Low_complexity 3 80 0 1806 135 112 35 chr20 8865433 8865781 -63288101 - THE1C LTR MaLR 0 375 1 28 29 0 0 chr20 8866108 8866143 -63287739 + AT_rich Low_complexity Low_complexity 1 35 0 2273 151 20 25 chr20 8866148 8866636 -63287246 - L1MA9 LINE L1 -22 6290 5702 * 4038 175 46 1 chr20 8866624 8867414 -63286468 + L1 LINE L1 4407 5231 -915 28 79 0 0 chr20 8867700 8867763 -63286119 + AT_rich Low_complexity Low_complexity 1 63 0 1032 142 0 0 chr20 8867764 8867912 -63285970 - FRAM SINE Alu -20 156 9 35 24 0 0 chr20 8868046 8868088 -63285794 + AT_rich Low_complexity Low_complexity 1 42 0 278 245 210 80 chr20 8868241 8868268 -63285614 - L1MC/D LINE L1 -1922 5886 5864 2083 97 4 7 chr20 8868268 8868572 -63285310 + AluSc SINE Alu 1 303 0 278 245 210 80 chr20 8868572 8868927 -63284955 - L1MC/D LINE L1 -1944 5864 5411 2427 69 3 3 chr20 8868927 8869231 -63284651 - AluY SINE Alu -7 304 1 278 245 210 80 chr20 8869231 8869385 -63284497 - L1MC/D LINE L1 -2397 5411 5278 333 349 62 16 chr20 8869423 8869730 -63284152 - L1MC/D LINE L1 -845 5301 4981 935 227 15 0 chr20 8869949 8870147 -63283735 - MER6B DNA MER2_type -7 203 3 278 289 26 0 chr20 8870147 8870223 -63283659 + L2 LINE L2 3236 3313 0 382 292 24 56 chr20 8870249 8870424 -63283458 - HAL1b LINE L1 -437 911 745 1903 140 9 22 chr20 8870424 8870739 -63283143 - AluJb SINE Alu -1 311 1 382 292 24 56 chr20 8870739 8870813 -63283069 - HAL1b LINE L1 -603 745 670 325 296 44 48 chr20 8871078 8871372 -63282510 - HAL1b LINE L1 -878 470 178 21 36 0 0 chr20 8871650 8871678 -63282204 + AT_rich Low_complexity Low_complexity 1 28 0 638 344 57 0 chr20 8871945 8872192 -63281690 - MIR SINE MIR -1 261 1 24 0 0 0 chr20 8872412 8872436 -63281446 + AT_rich Low_complexity Low_complexity 1 24 0 279 0 0 0 chr20 8873004 8873035 -63280847 + (CA)n Simple_repeat Simple_repeat 1 31 0 856 256 79 4 chr20 8873514 8873741 -63280141 + MLT1G LTR MaLR 12 255 -335 754 234 8 98 chr20 8873751 8874016 -63279866 + MIR SINE MIR 1 241 -21 1079 267 181 2 chr20 8874785 8875204 -63278678 + LTR33A LTR ERVL 29 522 -1 2159 136 7 0 chr20 8876772 8877082 -63276800 + MER1B DNA MER1_type 28 339 0 180 125 0 0 chr20 8877513 8877545 -63276337 + (TG)n Simple_repeat Simple_repeat 2 33 0 247 24 24 24 chr20 8877920 8877961 -63275921 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 497 294 65 26 chr20 8877969 8878200 -63275682 + Charlie8 DNA MER1_type 150 389 -2028 623 268 156 73 chr20 8879320 8879805 -63274077 + LTR33 LTR ERVL 24 516 -7 370 373 43 19 chr20 8879880 8880089 -63273793 - MIR SINE MIR -2 260 47 487 330 89 26 chr20 8880107 8880223 -63273659 + L3 LINE CR1 1221 1328 -249 806 214 8 126 chr20 8880223 8880461 -63273421 + MER63A DNA MER1_type 1 210 0 487 330 89 26 chr20 8880461 8880647 -63273235 + L3 LINE CR1 1328 1542 -35 201 299 58 11 chr20 8880793 8880880 -63273002 + MIR SINE MIR 79 169 -93 22 0 0 0 chr20 8881066 8881088 -63272794 + AT_rich Low_complexity Low_complexity 1 22 0 187 195 73 0 chr20 8881938 8881979 -63271903 - L2 LINE L2 -12 3260 3217 * 248 299 239 27 chr20 8881950 8882134 -63271748 - MIR SINE MIR -21 241 19 2586 219 56 37 chr20 8882641 8883341 -63270541 + L1ME3A LINE L1 5420 6132 -38 248 158 18 0 chr20 8884910 8884967 -63268915 + GA-rich Low_complexity Low_complexity 1 58 0 555 279 107 17 chr20 8885757 8885990 -63267892 - MLT1J2 LTR MaLR -130 320 67 182 368 23 35 chr20 8886377 8886464 -63267418 - MIR SINE MIR -171 91 6 394 289 10 13 chr20 8886593 8886736 -63267146 + MLT1H LTR MaLR 57 167 -242 378 184 145 21 chr20 8886847 8886987 -63266895 + MLT1F1 LTR MaLR 427 550 -17 610 255 7 7 chr20 8887899 8888044 -63265838 - MER117 DNA MER1_type -52 145 1 2116 92 4 0 chr20 8890288 8890561 -63263321 - AluSp SINE Alu -3 310 37 1476 248 60 10 chr20 8890580 8890995 -63262887 - L1ME1 LINE L1 -5 6161 5726 2249 260 62 7 chr20 8891135 8891813 -63262069 + L1ME3A LINE L1 5420 6134 -36 2283 113 3 0 chr20 8891816 8892118 -63261764 + AluSq SINE Alu 3 305 -8 212 337 41 10 chr20 8893188 8893286 -63260596 + MIR SINE MIR 40 140 -68 711 230 23 40 chr20 8893353 8893412 -63260470 + MER5A DNA MER1_type 18 76 -113 1820 160 0 23 chr20 8893412 8893712 -63260170 + AluJo SINE Alu 3 295 -17 711 230 23 40 chr20 8893712 8893826 -63260056 + MER5A DNA MER1_type 76 188 -1 777 269 127 4 chr20 8894795 8895055 -63258827 - MLT1G1 LTR MaLR -19 576 285 668 231 27 41 chr20 8895055 8895202 -63258680 - AluJo SINE Alu -57 255 111 1172 241 44 0 chr20 8895202 8895472 -63258410 - MLT1G1 LTR MaLR -312 283 2 610 309 39 5 chr20 8895638 8895842 -63258040 - MIR SINE MIR -18 244 34 201 139 0 0 chr20 8895904 8895947 -63257935 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 840 188 7 0 chr20 8895947 8896101 -63257781 - L1MD3 LINE L1 -5 7990 7836 1006 207 102 53 chr20 8896102 8896475 -63257407 - MER57A LTR ERV1 0 403 1 1366 232 40 27 chr20 8896475 8896846 -63257036 - L1MD3 LINE L1 -157 7838 7463 24 32 0 0 chr20 8896964 8896995 -63256887 + AT_rich Low_complexity Low_complexity 1 31 0 1235 120 6 0 chr20 8896995 8897162 -63256720 - AluSx SINE Alu -140 172 5 246 317 26 26 chr20 8898653 8898767 -63255115 + MIR SINE MIR 42 154 -73 1256 168 20 72 chr20 8899653 8899722 -63254160 - MLT1C LTR MaLR 0 467 396 2865 13 0 0 chr20 8899722 8900033 -63253849 - AluYa5 SINE Alu 0 311 1 1256 168 20 72 chr20 8900033 8900255 -63253627 - MLT1C LTR MaLR -71 396 191 594 28 0 0 chr20 8900257 8900329 -63253553 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 189 364 45 0 chr20 8900347 8900457 -63253425 - L3 LINE CR1 -62 1515 1401 805 300 44 31 chr20 8901138 8901455 -63252427 + MLT1I LTR MaLR 70 390 -19 286 329 17 68 chr20 8901522 8901759 -63252123 + L2 LINE L2 2305 2529 -785 * 496 317 60 70 chr20 8901756 8902226 -63251656 - L2 LINE L2 -1 3271 2807 531 313 107 5 chr20 8902349 8902573 -63251309 - MIR SINE MIR -10 252 6 252 336 60 0 chr20 8902753 8902887 -63250995 - L2 LINE L2 -836 2478 2337 369 0 0 0 chr20 8904411 8904452 -63249430 + (TG)n Simple_repeat Simple_repeat 1 41 0 255 133 0 0 chr20 8905494 8905539 -63248343 + (TC)n Simple_repeat Simple_repeat 2 46 0 326 245 238 7 chr20 8905804 8905947 -63247935 - MER5A DNA MER1_type -1 188 13 26 0 0 0 chr20 8906348 8906374 -63247508 + AT_rich Low_complexity Low_complexity 1 26 0 382 61 30 30 chr20 8906663 8906729 -63247153 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 472 345 60 82 chr20 8907283 8907688 -63246194 + L2 LINE L2 2817 3212 -60 2120 135 0 7 chr20 8907688 8907991 -63245891 + AluSx SINE Alu 1 301 -11 472 345 60 82 chr20 8907991 8908051 -63245831 + L2 LINE L2 3212 3272 0 523 313 30 5 chr20 8908249 8908447 -63245435 - MIR SINE MIR -38 224 22 2409 88 0 3 chr20 8909764 8910069 -63243813 - AluSq SINE Alu -9 304 1 1792 129 4 0 chr20 8911544 8911800 -63242082 + AluSx SINE Alu 44 300 -12 1086 240 31 105 chr20 8912564 8912741 -63241141 - MLT1H LTR MaLR 0 549 360 327 49 0 0 chr20 8912741 8912782 -63241100 + (GGCTG)n Simple_repeat Simple_repeat 5 45 0 1086 240 31 105 chr20 8912782 8913117 -63240765 - MLT1H LTR MaLR -189 360 75 205 279 0 51 chr20 8916999 8917078 -63236804 + L2 LINE L2 3194 3268 -4 197 237 136 0 chr20 8917604 8917663 -63236219 - MIR3 SINE MIR -22 186 120 215 294 59 0 chr20 8919276 8919344 -63234538 + L2 LINE L2 3194 3265 -7 426 229 55 18 chr20 8921095 8921204 -63232678 - MIR SINE MIR -71 191 79 296 102 20 0 chr20 8921221 8921270 -63232612 + (GA)n Simple_repeat Simple_repeat 2 51 0 894 152 11 6 chr20 8921292 8921470 -63232412 + GA-rich Low_complexity Low_complexity 2 180 0 425 190 69 138 chr20 8921484 8921565 -63232317 + MER63A DNA MER1_type 43 107 -1581 1834 140 6 35 chr20 8921565 8921879 -63232003 - AluSx SINE Alu -7 305 1 425 190 69 138 chr20 8921879 8921971 -63231911 + MER63A DNA MER1_type 107 204 -6 327 308 19 10 chr20 8921980 8922084 -63231798 - MIR SINE MIR -146 116 12 276 235 59 12 chr20 8922942 8923027 -63230855 - MIR SINE MIR -51 211 123 500 299 77 15 chr20 8923047 8923481 -63230401 - LTR33 LTR ERVL -15 506 3 248 266 160 0 chr20 8923564 8923658 -63230224 + MIR SINE MIR 35 143 -65 336 102 0 0 chr20 8924082 8924131 -63229751 + (CA)n Simple_repeat Simple_repeat 2 50 0 911 263 108 50 chr20 8924698 8924886 -63228996 + LTR16C LTR ERVL 89 265 -226 3692 128 23 4 chr20 8924886 8925401 -63228481 + MER1A DNA MER1_type 3 527 0 911 263 108 50 chr20 8925401 8925593 -63228289 + LTR16C LTR ERVL 265 491 0 498 252 150 0 chr20 8925597 8925744 -63228138 - MER91A DNA MER1_type -27 169 1 5644 57 3 1 chr20 8925971 8926636 -63227246 - L1PA7 LINE L1 0 6154 5489 1807 45 18 0 chr20 8926637 8926923 -63226959 + L1PA7 LINE L1 5197 5486 -668 502 50 0 0 chr20 8926944 8927004 -63226878 + L1MB1 LINE L1 6106 6165 -3 465 295 65 0 chr20 8928199 8928338 -63225544 + MIR3 SINE MIR 56 203 -5 452 273 24 81 chr20 8928382 8928591 -63225291 - MIR SINE MIR 0 262 66 442 293 20 7 chr20 8928595 8928742 -63225140 - LTR33 LTR ERVL -7 514 366 713 277 47 22 chr20 8928792 8929070 -63224812 - LTR33 LTR ERVL -234 287 3 302 329 87 30 chr20 8929601 8929832 -63224050 + L2 LINE L2 2933 3176 -96 591 235 127 12 chr20 8929859 8930025 -63223857 - MIR SINE MIR 0 262 78 2537 53 10 0 chr20 8930053 8930353 -63223529 - AluY SINE Alu -8 303 1 253 243 0 29 chr20 8930471 8930541 -63223341 - L2 LINE L2 -10 3303 3236 183 100 0 0 chr20 8931247 8931277 -63222605 + (TG)n Simple_repeat Simple_repeat 1 30 0 1501 77 0 0 chr20 8931502 8931716 -63222166 + AluY SINE Alu 100 313 0 281 215 25 13 chr20 8931821 8931900 -63221982 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 232 64 0 21 chr20 8931918 8931965 -63221917 + LTR66 LTR ERVL 394 439 -171 207 284 19 117 chr20 8932651 8932813 -63221069 + L2 LINE L2 2904 3049 -223 755 268 36 8 chr20 8932846 8933094 -63220788 - MIR SINE MIR -4 258 3 637 66 0 38 chr20 8933981 8934087 -63219795 + (GA)n Simple_repeat Simple_repeat 1 102 0 1842 250 27 36 chr20 8934388 8934944 -63218938 - L1ME1 LINE L1 -67 6099 5549 180 216 0 0 chr20 8935990 8936041 -63217841 + T-rich Low_complexity Low_complexity 1 51 0 557 316 61 4 chr20 8936196 8936424 -63217458 + LTR16C LTR ERVL 251 491 0 180 0 0 0 chr20 8937172 8937192 -63216690 + (CA)n Simple_repeat Simple_repeat 1 20 0 921 240 84 30 chr20 8938159 8938705 -63215177 - L1ME3A LINE L1 -6 6164 5557 404 278 134 21 chr20 8939706 8939900 -63213982 + MIR SINE MIR 42 257 -5 231 337 48 12 chr20 8940269 8940352 -63213530 - L2 LINE L2 -181 3091 3006 418 331 144 32 chr20 8940520 8941002 -63212880 - L2 LINE L2 -5 3308 2720 251 331 16 41 chr20 8943630 8943751 -63210131 - MIR3 SINE MIR -3 205 88 1898 100 7 15 chr20 8944343 8944613 -63209269 + AluSc SINE Alu 41 308 -1 322 239 0 0 chr20 8944854 8944925 -63208957 - MIR SINE MIR -9 253 183 326 141 0 16 chr20 8945611 8945675 -63208207 + (TA)n Simple_repeat Simple_repeat 1 63 0 243 246 161 101 chr20 8945764 8946081 -63207801 - MLT1H LTR MaLR -185 364 29 189 132 0 0 chr20 8946102 8946140 -63207742 + (TA)n Simple_repeat Simple_repeat 2 39 0 245 306 69 94 chr20 8946263 8946508 -63207374 - MIR SINE MIR -1 261 23 1586 199 31 9 chr20 8947173 8947500 -63206382 + MLT1A1 LTR MaLR 12 345 -20 254 278 56 0 chr20 8949205 8949349 -63204533 - MER103 DNA DNA -2 164 13 1508 248 122 24 chr20 8949578 8950118 -63203764 + MLT1G1 LTR MaLR 3 595 0 247 306 231 31 chr20 8950483 8950643 -63203239 + L2 LINE L2 3122 3313 0 428 282 0 8 chr20 8951105 8951229 -63202653 + MER94 DNA DNA 11 133 -1 4470 156 19 2 chr20 8951586 8952395 -63201487 - L1MC2 LINE L1 -9 6335 5514 948 92 7 7 chr20 8952429 8952571 -63201311 - L1PA7 LINE L1 -6 6148 6007 530 355 51 28 chr20 8952577 8952966 -63200916 - LTR33 LTR ERVL -99 422 25 211 326 92 20 chr20 8953215 8953313 -63200569 - L3b LINE CR1 -80 1503 1399 1169 153 22 61 chr20 8953593 8953821 -63200061 - MER20 DNA MER1_type 0 219 1 186 43 0 0 chr20 8954446 8954469 -63199413 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 228 118 0 0 chr20 8955105 8955139 -63198743 + (GA)n Simple_repeat Simple_repeat 2 35 0 682 121 0 23 chr20 8955139 8955271 -63198611 + (GGAA)n Simple_repeat Simple_repeat 4 132 0 643 145 75 0 chr20 8955682 8955841 -63198041 - Charlie5 DNA MER1_type -94 2518 2348 371 284 121 7 chr20 8956023 8956164 -63197718 + MIR3 SINE MIR 42 198 -10 2052 174 126 39 chr20 8956186 8956704 -63197178 + MLT1F1 LTR MaLR 5 567 0 648 358 9 0 chr20 8956837 8957055 -63196827 - MIR SINE MIR -2 260 41 214 276 192 32 chr20 8957456 8957612 -63196270 + L3b LINE CR1 1270 1450 -133 253 367 33 39 chr20 8957667 8957847 -63196035 + MIR SINE MIR 7 185 -77 379 314 7 36 chr20 8958477 8958617 -63195265 + MER63A DNA MER1_type 62 197 -13 911 279 61 74 chr20 8958704 8959242 -63194640 - MLT1F LTR MaLR 0 542 12 907 242 5 16 chr20 8959685 8959871 -63194011 + MER5A DNA MER1_type 1 184 -5 392 292 17 17 chr20 8959915 8960035 -63193847 - MIR3 SINE MIR -18 190 71 602 222 0 8 chr20 8960530 8960656 -63193226 - FLAM_C SINE Alu -18 125 1 2014 123 0 10 chr20 8961569 8961862 -63192020 - AluSx SINE Alu -1 311 22 1637 248 61 53 chr20 8961892 8962499 -63191383 + MLT1G LTR MaLR 5 578 -12 188 256 0 0 chr20 8962804 8962843 -63191039 + L2 LINE L2 3267 3305 -8 393 233 23 11 chr20 8962948 8963124 -63190758 + CT-rich Low_complexity Low_complexity 1 178 0 401 327 25 44 chr20 8963281 8963440 -63190442 + MER5A DNA MER1_type 31 186 -3 889 269 94 12 chr20 8963682 8964084 -63189798 + Charlie4a DNA MER1_type 41 475 -33 492 117 0 0 chr20 8964488 8964565 -63189317 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 1972 145 3 7 chr20 8964574 8964877 -63189005 - AluSx SINE Alu -10 302 1 206 286 16 110 chr20 8964993 8965175 -63188707 - MIR SINE MIR -2 260 96 380 223 92 70 chr20 8965377 8965550 -63188332 - MIR SINE MIR -66 142 19 185 316 26 68 chr20 8966822 8966939 -63186943 - L2 LINE L2 -1317 1997 1886 582 109 0 0 chr20 8967217 8967309 -63186573 + (TCCA)n Simple_repeat Simple_repeat 1 92 0 181 152 0 0 chr20 8967313 8967346 -63186536 - L2 LINE L2 -2 3311 3279 239 303 0 0 chr20 8967617 8967683 -63186199 - L2 LINE L2 -7 3306 3241 267 289 72 47 chr20 8967823 8968154 -63185728 - L2 LINE L2 -314 2958 2549 1769 183 3 7 chr20 8968665 8968955 -63184927 - AluJo SINE Alu -23 289 1 658 159 203 18 chr20 8970296 8970459 -63183423 - L1PA15 LINE L1 -5 6160 5968 234 300 56 0 chr20 8970553 8970643 -63183239 + MER117 DNA MER1_type 100 194 -3 225 0 0 0 chr20 8970855 8970880 -63183002 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2880 56 14 0 chr20 8970880 8971237 -63182645 - L1PA7 LINE L1 -18 6136 5775 313 319 142 21 chr20 8971251 8971533 -63182349 + L2 LINE L2 2199 2514 -800 2180 208 97 17 chr20 8971589 8972165 -63181717 - MLT1E3 LTR MaLR -1 623 2 627 267 8 21 chr20 8972238 8972393 -63181489 - LTR16C LTR ERVL 0 491 290 1724 163 46 6 chr20 8972393 8972719 -63181163 - MER44D DNA MER2_type 0 609 1 627 267 8 21 chr20 8972719 8972823 -63181059 - LTR16C LTR ERVL -201 290 186 681 279 48 24 chr20 8973077 8973328 -63180554 - MIR SINE MIR 0 262 6 301 372 19 6 chr20 8973375 8973531 -63180351 + L1MC2 LINE L1 5483 5640 -2168 238 205 60 24 chr20 8973588 8973671 -63180211 + L1MC2 LINE L1 5746 5831 -1977 1596 143 22 35 chr20 8973757 8974071 -63179811 + L1MC2 LINE L1 6026 6335 -9 213 94 0 0 chr20 8974706 8974738 -63179144 + (CAAT)n Simple_repeat Simple_repeat 3 34 0 187 171 29 0 chr20 8976295 8976330 -63177552 - MER5A DNA MER1_type -118 71 36 886 177 27 11 chr20 8976665 8976851 -63177031 + MER5A DNA MER1_type 1 189 0 459 282 16 0 chr20 8977047 8977171 -63176711 + MER94 DNA DNA 1 126 -8 680 131 16 8 chr20 8977484 8977606 -63176276 + MER65A LTR ERV1 323 445 0 1823 174 7 3 chr20 8978697 8978991 -63174891 + AluJb SINE Alu 1 295 -17 2129 111 4 0 chr20 8979255 8979630 -63174252 - AluSx SINE Alu 0 376 1 1654 183 20 0 chr20 8980584 8980885 -63172997 - AluSx SINE Alu -5 307 1 420 311 87 72 chr20 8981462 8981783 -63172099 + L3 LINE CR1 1178 1503 -74 233 259 0 0 chr20 8982654 8982712 -63171170 + (TG)n Simple_repeat Simple_repeat 2 59 0 728 324 122 17 chr20 8982734 8983250 -63170632 - L2 LINE L2 -2 3311 2754 243 79 0 0 chr20 8984189 8984227 -63169655 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 185 0 0 39 chr20 8985706 8985732 -63168150 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 384 295 40 46 chr20 8985733 8985819 -63168063 + L2 LINE L2 2141 2226 -1088 1399 249 0 10 chr20 8985819 8986132 -63167750 - AluJo SINE Alu -2 310 1 384 295 40 46 chr20 8986132 8986218 -63167664 + L2 LINE L2 2226 2312 -1002 743 239 114 30 chr20 8986224 8986550 -63167332 - MLT1F1 LTR MaLR -202 365 1 515 292 103 5 chr20 8986552 8986737 -63167145 + L2 LINE L2 2577 2779 -535 727 316 56 51 chr20 8986988 8987558 -63166324 + MLT1L LTR MaLR 43 615 0 1045 316 32 52 chr20 8987925 8988520 -63165362 + L2 LINE L2 2548 3129 -184 1908 197 34 12 chr20 8988520 8988936 -63164946 + MSTB LTR MaLR 1 425 -1 1045 316 32 52 chr20 8988936 8989117 -63164765 + L2 LINE L2 3129 3312 -1 207 347 20 31 chr20 8989145 8989243 -63164639 + MIR3 SINE MIR 98 194 -14 282 276 141 29 chr20 8989290 8989460 -63164422 + MIR SINE MIR 22 210 -52 1696 190 3 23 chr20 8989846 8990151 -63163731 - AluJo SINE Alu -13 299 1 216 261 0 0 chr20 8990489 8990535 -63163347 + CT-rich Low_complexity Low_complexity 2 47 0 2020 120 13 27 chr20 8991029 8991329 -63162553 + AluSx SINE Alu 1 296 -16 181 227 45 0 chr20 8991604 8991648 -63162234 + L2 LINE L2 3268 3313 0 354 270 230 14 chr20 8991912 8992060 -63161822 - MER5A DNA MER1_type -6 183 4 708 83 38 8 chr20 8992845 8992977 -63160905 + GA-rich Low_complexity Low_complexity 1 136 0 221 315 210 28 chr20 8994306 8994449 -63159433 + MIR SINE MIR 6 174 -88 826 123 31 15 chr20 8995195 8995325 -63158557 - AluJo/FRAM SINE Alu -14 298 167 346 196 0 0 chr20 8995325 8995381 -63158501 - Alu SINE Alu -252 56 1 353 306 174 27 chr20 8995572 8995830 -63158052 - L3 LINE CR1 -111 1466 1171 243 239 0 0 chr20 8995909 8995976 -63157906 + (TA)n Simple_repeat Simple_repeat 2 68 0 507 167 12 0 chr20 8996002 8996086 -63157796 - AluJ/FLAM SINE Alu -222 90 6 2218 102 3 0 chr20 8996209 8996503 -63157379 - AluSx SINE Alu -17 295 1 195 231 0 77 chr20 8996702 8996754 -63157128 - L2 LINE L2 0 3272 3225 209 339 179 25 chr20 8998303 8998866 -63155016 - L2 LINE L2 -2331 983 334 5954 46 17 5 chr20 8998907 8999691 -63154191 - L1PA7 LINE L1 0 6154 5362 439 259 167 17 chr20 9000132 9000306 -63153576 + MIR SINE MIR 58 257 -5 246 236 396 0 chr20 9001871 9001977 -63151905 + MER5A DNA MER1_type 41 188 -1 306 255 265 51 chr20 9002113 9002156 -63151726 + L2 LINE L2 2537 2569 -745 2148 122 10 0 chr20 9002156 9002452 -63151430 - AluSx SINE Alu -13 299 1 306 255 265 51 chr20 9002452 9002604 -63151278 + L2 LINE L2 2569 2774 -540 2045 125 30 0 chr20 9003256 9003552 -63150330 + AluSx SINE Alu 1 305 -7 4297 113 3 0 chr20 9003667 9004298 -63149584 - MER41B LTR ERV1 0 635 3 707 230 109 27 chr20 9004394 9004898 -63148984 + MLT1G1 LTR MaLR 5 542 0 29 28 0 0 chr20 9004898 9004934 -63148948 + AT_rich Low_complexity Low_complexity 1 36 0 2498 171 29 17 chr20 9005329 9005807 -63148075 - L1PA15 LINE L1 -4 6161 5678 2500 90 0 0 chr20 9006380 9006691 -63147191 - AluSx SINE Alu -1 311 1 358 307 11 0 chr20 9007020 9007108 -63146774 + L2 LINE L2 3223 3311 -2 423 301 82 10 chr20 9008025 9008221 -63145661 + LTR16C LTR ERVL 280 489 -2 667 213 128 11 chr20 9008279 9008467 -63145415 + MER63A DNA MER1_type 1 210 0 1564 201 62 0 chr20 9008580 9008868 -63145014 - AluJb SINE Alu -5 307 2 286 237 43 21 chr20 9008998 9009091 -63144791 - LTR33 LTR ERVL -14 507 413 237 331 32 35 chr20 9010989 9011145 -63142737 + MIR SINE MIR 68 228 -34 22 35 0 0 chr20 9012725 9012754 -63141128 + AT_rich Low_complexity Low_complexity 1 29 0 274 230 160 0 chr20 9013058 9013158 -63140724 + L1MC4 LINE L1 7926 8041 -1 383 278 71 10 chr20 9014115 9014313 -63139569 - L1ME LINE L1 -354 5767 5558 354 267 41 56 chr20 9014341 9014536 -63139346 - L1ME LINE L1 -2495 5500 5309 892 169 111 5 chr20 9016985 9017174 -63136708 + MER3 DNA MER1_type 1 209 0 4837 141 25 11 chr20 9017832 9018776 -63135106 - L1PB4 LINE L1 0 6156 5197 294 355 95 30 chr20 9019151 9019447 -63134435 - L2 LINE L2 -774 2540 2226 181 308 28 137 chr20 9019752 9019963 -63133919 + L2 LINE L2 2994 3181 -91 189 333 0 30 chr20 9020339 9020405 -63133477 + L2 LINE L2 3245 3308 -5 248 333 77 44 chr20 9021214 9021397 -63132485 - MIR3 SINE MIR -17 191 3 306 132 0 0 chr20 9022855 9022908 -63130974 + (CA)n Simple_repeat Simple_repeat 2 54 0 978 121 0 0 chr20 9023001 9023133 -63130749 + AluSq/x SINE Alu 1 132 -180 835 269 31 18 chr20 9023367 9023590 -63130292 + MIR SINE MIR 1 226 -36 212 175 0 0 chr20 9023874 9023914 -63129968 + T-rich Low_complexity Low_complexity 4 43 0 266 307 57 0 chr20 9025200 9025288 -63128594 + MER94 DNA DNA 27 119 -15 384 314 109 0 chr20 9025385 9025522 -63128360 - MIR SINE MIR -27 235 84 226 254 0 0 chr20 9025641 9025696 -63128186 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1731 76 0 13 chr20 9025723 9025947 -63127935 + AluY SINE Alu 1 221 -90 30 0 0 0 chr20 9026191 9026221 -63127661 + AT_rich Low_complexity Low_complexity 1 30 0 339 130 0 0 chr20 9026221 9026275 -63127607 + (CA)n Simple_repeat Simple_repeat 2 55 0 323 177 35 97 chr20 9026489 9026602 -63127280 + MIR SINE MIR 82 187 -75 1100 142 0 18 chr20 9026835 9027004 -63126878 - AluJb SINE Alu -9 303 138 614 280 15 37 chr20 9027315 9027583 -63126299 - L1ME LINE L1 -376 5794 5533 734 275 108 47 chr20 9027605 9027790 -63126092 + LTR16C LTR ERVL 1 173 -318 2211 106 3 0 chr20 9027790 9028083 -63125799 + AluSg SINE Alu 1 294 -16 734 275 108 47 chr20 9028083 9028323 -63125559 + LTR16C LTR ERVL 173 452 -39 194 156 0 0 chr20 9028426 9028458 -63125424 + L2 LINE L2 3191 3222 -91 233 324 68 54 chr20 9030165 9030313 -63123569 + L3b LINE CR1 1267 1416 -167 2437 74 7 0 chr20 9030356 9030654 -63123228 - AluY SINE Alu -11 300 1 2393 87 0 10 chr20 9030872 9031184 -63122698 + AluY SINE Alu 1 309 -2 2842 16 0 0 chr20 9031223 9031533 -63122349 + AluYb8 SINE Alu 1 310 -8 2307 67 0 29 chr20 9032099 9032411 -63121471 + AluY SINE Alu 1 303 -8 467 282 177 10 chr20 9032522 9032731 -63121151 - MIR SINE MIR 0 262 19 235 266 16 16 chr20 9036145 9036209 -63117673 - MIR3 SINE MIR -11 197 134 370 269 34 67 chr20 9036283 9036402 -63117480 + MIR3 SINE MIR 8 122 -86 2636 55 0 0 chr20 9036770 9037079 -63116803 + AluY SINE Alu 1 309 -2 270 310 63 51 chr20 9038866 9039024 -63114858 + MIR3 SINE MIR 10 169 -39 409 258 94 0 chr20 9040155 9040283 -63113599 - MIR SINE MIR -110 152 13 2272 92 10 0 chr20 9041265 9041559 -63112323 + AluSp SINE Alu 1 297 -16 1870 153 3 3 chr20 9042481 9042805 -63111077 - AluSx SINE Alu 0 324 1 238 265 15 0 chr20 9042836 9042904 -63110978 + (TGAA)n Simple_repeat Simple_repeat 1 69 0 412 261 23 86 chr20 9042911 9043097 -63110785 - MER5A DNA MER1_type 0 189 5 1941 135 44 10 chr20 9043332 9043628 -63110254 + AluSc SINE Alu 1 306 -3 199 330 170 19 chr20 9043802 9043908 -63109974 - L2 LINE L2 -4 3309 3188 198 118 0 0 chr20 9045178 9045212 -63108670 + (T)n Simple_repeat Simple_repeat 1 34 0 528 268 137 0 chr20 9045254 9045407 -63108475 - LTR16A LTR ERVL -119 331 158 321 274 117 85 chr20 9047989 9048077 -63105805 + HAL1 LINE L1 218 302 -2205 804 270 6 0 chr20 9048077 9048251 -63105631 - MER45A DNA AcHobo 0 178 4 321 274 117 85 chr20 9048251 9048385 -63105497 + HAL1 LINE L1 302 447 -2060 2413 89 3 0 chr20 9048521 9048825 -63105057 - AluY SINE Alu -6 305 1 392 222 261 39 chr20 9048991 9049194 -63104688 + MIR SINE MIR 3 250 -12 241 163 23 0 chr20 9049163 9049206 -63104676 + L2 LINE L2 3224 3267 -5 * 183 205 0 0 chr20 9049209 9049248 -63104634 + GA-rich Low_complexity Low_complexity 1 39 0 237 262 97 48 chr20 9049284 9049387 -63104495 + MIR SINE MIR 10 117 -145 387 176 22 34 chr20 9049393 9049482 -63104400 - MLT1H LTR MaLR 0 549 311 537 243 15 7 chr20 9049835 9049971 -63103911 + MIR SINE MIR 122 258 -4 456 303 73 33 chr20 9051225 9051499 -63102383 + LTR16A LTR ERVL 17 301 -149 2181 113 0 0 chr20 9051570 9051861 -63102021 - AluSc SINE Alu -18 291 1 340 271 207 7 chr20 9051931 9052071 -63101811 - MIR SINE MIR -29 233 66 510 242 87 19 chr20 9052382 9052543 -63101339 - LTR33 LTR ERVL -6 515 344 655 197 41 0 chr20 9052557 9052704 -63101178 + Charlie4 DNA MER1_type 1807 1959 -2 315 350 12 31 chr20 9053105 9053265 -63100617 - L2 LINE L2 -585 2729 2573 1113 268 100 11 chr20 9053333 9053702 -63100180 + LTR16C LTR ERVL 90 491 0 257 362 38 31 chr20 9053756 9054074 -63099808 - L2 LINE L2 -787 2527 2208 399 254 0 90 chr20 9054367 9054501 -63099381 + MER94 DNA DNA 1 122 -12 197 196 20 0 chr20 9054584 9054635 -63099247 + GA-rich Low_complexity Low_complexity 1 52 0 244 349 0 0 chr20 9054750 9054833 -63099049 + L2 LINE L2 3190 3272 0 2297 110 0 0 chr20 9055041 9055342 -63098540 + AluSg SINE Alu 1 301 -9 386 241 92 64 chr20 9055348 9055489 -63098393 + MIR SINE MIR 118 262 0 2033 128 31 0 chr20 9055912 9056039 -63097843 + AluSx SINE Alu 1 123 -189 180 0 0 0 chr20 9056039 9056059 -63097823 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 2033 128 31 0 chr20 9056059 9056221 -63097661 + AluSx SINE Alu 123 299 -13 829 199 78 5 chr20 9056660 9056851 -63097031 + MER3 DNA MER1_type 2 206 -3 542 331 209 21 chr20 9057013 9057538 -63096344 + L2 LINE L2 1995 2618 -696 509 316 118 15 chr20 9057737 9058000 -63095882 + L2 LINE L2 3005 3294 -19 22 0 0 0 chr20 9058324 9058346 -63095536 + AT_rich Low_complexity Low_complexity 1 22 0 29 70 0 0 chr20 9059116 9059173 -63094709 + AT_rich Low_complexity Low_complexity 1 57 0 399 274 72 13 chr20 9059967 9060120 -63093762 + MIR SINE MIR 44 205 -57 559 124 0 67 chr20 9060739 9060844 -63093038 - L1MD1 LINE L1 -8 6234 6137 3095 180 62 9 chr20 9060847 9061509 -63092373 - L1MD2 LINE L1 -276 6083 5387 269 274 11 0 chr20 9061869 9061964 -63091918 + (TA)n Simple_repeat Simple_repeat 1 96 0 1056 235 91 76 chr20 9062103 9062656 -63091226 + L1MC4 LINE L1 7344 7910 -132 288 0 0 0 chr20 9062656 9062688 -63091194 + (TG)n Simple_repeat Simple_repeat 2 33 0 1056 235 91 76 chr20 9062688 9062815 -63091067 + L1MC4 LINE L1 7910 8034 -8 262 269 52 67 chr20 9062929 9063063 -63090819 - MIR3 SINE MIR -52 156 25 553 289 119 64 chr20 9064091 9064402 -63089480 - L2 LINE L2 -1 3271 2944 461 156 10 52 chr20 9064629 9064725 -63089157 + MER5B DNA MER1_type 80 171 -7 4886 93 14 1 chr20 9064943 9065638 -63088244 - L1PB1 LINE L1 -4 6147 5444 1140 189 6 42 chr20 9065654 9065966 -63087916 + L1 LINE L1 5103 5403 -743 1607 184 3 52 chr20 9066003 9066313 -63087569 + AluJo SINE Alu 1 295 -17 219 261 14 14 chr20 9067348 9067417 -63086465 + CT-rich Low_complexity Low_complexity 3 71 0 247 283 0 0 chr20 9067958 9068018 -63085864 + T-rich Low_complexity Low_complexity 3 62 0 1775 161 109 13 chr20 9068487 9068873 -63085009 - MSTC LTR MaLR -5 423 1 972 239 92 52 chr20 9068873 9069166 -63084716 + Charlie4a DNA MER1_type 40 359 -1602 1268 144 27 9 chr20 9069166 9069388 -63084494 + L1PB1 LINE L1 5923 6148 -3 972 239 92 52 chr20 9069388 9069541 -63084341 + Charlie4a DNA MER1_type 359 504 -4 2287 87 10 0 chr20 9069800 9070098 -63083784 + AluSx SINE Alu 1 301 -11 390 259 17 9 chr20 9070492 9070608 -63083274 + Charlie4 DNA MER1_type 40 156 -1805 616 256 29 88 chr20 9070943 9071104 -63082778 + MIR SINE MIR 25 169 -93 2254 109 3 10 chr20 9071104 9071225 -63082657 + AluSx SINE Alu 1 121 -191 189 0 0 0 chr20 9071225 9071246 -63082636 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2254 109 3 10 chr20 9071246 9071427 -63082455 + AluSx SINE Alu 121 301 -11 616 256 29 88 chr20 9071427 9071503 -63082379 + MIR SINE MIR 169 248 -14 200 350 110 20 chr20 9072143 9072243 -63081639 + MIR SINE MIR 36 144 -64 977 327 50 59 chr20 9073656 9074201 -63079681 + MLT1K LTR MaLR 47 586 -2 406 115 0 0 chr20 9074329 9074390 -63079492 - L1PA16 LINE L1 -3 6163 6103 261 328 64 0 chr20 9074626 9074751 -63079131 - MLT1I LTR MaLR -276 133 1 2218 73 0 14 chr20 9074945 9075258 -63078624 - AluY SINE Alu 0 309 1 1569 198 0 17 chr20 9075463 9075756 -63078126 + AluJo SINE Alu 1 288 -24 2318 75 0 0 chr20 9075767 9076085 -63077797 + AluY SINE Alu 1 318 0 197 368 0 26 chr20 9076159 9076273 -63077609 - MIR SINE MIR -147 115 5 21 0 0 0 chr20 9077804 9077825 -63076057 + AT_rich Low_complexity Low_complexity 1 21 0 784 134 31 8 chr20 9077995 9078122 -63075760 + L1PA8 LINE L1 6038 6167 -5 183 391 98 0 chr20 9078320 9078412 -63075470 - L2 LINE L2 -55 3217 3117 2684 33 0 0 chr20 9078552 9078858 -63075024 + AluY SINE Alu 1 306 -5 537 325 72 15 chr20 9078870 9079135 -63074747 + L2 LINE L2 2698 2977 -337 2629 49 0 0 chr20 9079261 9079566 -63074316 - AluY SINE Alu 0 311 7 418 285 54 54 chr20 9079575 9079908 -63073974 + MLT1I LTR MaLR 75 407 -2 275 297 162 7 chr20 9079976 9080124 -63073758 + L2 LINE L2 3113 3283 -30 1745 155 35 11 chr20 9081120 9081404 -63072478 + AluJo SINE Alu 1 291 -21 1492 298 5 0 chr20 9082533 9082919 -63070963 + LTR16C LTR ERVL 104 491 0 1795 173 3 3 chr20 9083628 9083917 -63069965 + AluJb SINE Alu 2 290 -22 2468 209 151 11 chr20 9084767 9085562 -63068320 - L1MD2 LINE L1 0 6359 5454 337 283 20 141 chr20 9086259 9086410 -63067472 - L1MEd LINE L1 -5191 928 831 2372 82 7 13 chr20 9086410 9086713 -63067169 - AluSx SINE Alu -11 301 1 337 283 20 141 chr20 9086713 9086865 -63067017 - L1MEd LINE L1 -5288 831 662 25 31 0 0 chr20 9087099 9087131 -63066751 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr20 9087757 9087778 -63066104 + AT_rich Low_complexity Low_complexity 1 21 0 243 119 0 0 chr20 9088024 9088066 -63065816 + MLT1G1 LTR MaLR 16 57 -538 1535 124 5 0 chr20 9088067 9088277 -63065605 - AluSg/x SINE Alu -7 303 93 981 126 7 7 chr20 9088296 9088439 -63065443 - AluSq/x SINE Alu -170 143 1 1079 269 160 25 chr20 9088440 9088920 -63064962 + MLT1G1 LTR MaLR 51 595 0 195 343 107 29 chr20 9089510 9089650 -63064232 - L2 LINE L2 0 3272 3122 313 263 50 0 chr20 9089915 9090014 -63063868 - L1MC/D LINE L1 -351 5770 5665 2199 110 13 0 chr20 9090058 9090357 -63063525 - AluSx SINE Alu -7 305 3 341 257 18 28 chr20 9090498 9090607 -63063275 + CT-rich Low_complexity Low_complexity 2 109 0 21 89 0 0 chr20 9090616 9090672 -63063210 + AT_rich Low_complexity Low_complexity 1 56 0 635 270 13 0 chr20 9091716 9091868 -63062014 - MER91B DNA MER1_type -35 155 2 548 323 35 19 chr20 9093488 9093745 -63060137 + MIR SINE MIR 2 262 0 214 204 284 34 chr20 9093755 9093843 -63060039 + MIR3 SINE MIR 96 205 -3 1633 86 0 19 chr20 9094754 9094963 -63058919 + AluY SINE Alu 1 205 -106 418 267 167 27 chr20 9095818 9095968 -63057914 + MER5A DNA MER1_type 10 180 -9 324 341 0 0 chr20 9096109 9096197 -63057685 + MIR SINE MIR 37 124 -84 272 158 37 12 chr20 9096741 9096823 -63057059 + (TA)n Simple_repeat Simple_repeat 2 85 0 185 414 45 8 chr20 9097026 9097159 -63056723 + L2 LINE L2 3171 3308 -5 223 273 15 0 chr20 9098520 9098586 -63055296 + (TATATG)n Simple_repeat Simple_repeat 1 67 0 276 241 0 0 chr20 9098587 9098666 -63055216 + (TA)n Simple_repeat Simple_repeat 2 80 0 213 245 0 0 chr20 9098907 9098956 -63054926 - L2 LINE L2 -4 3309 3261 41 66 0 0 chr20 9099100 9099176 -63054706 + AT_rich Low_complexity Low_complexity 1 76 0 489 263 160 5 chr20 9099523 9099736 -63054146 + L1MC4a LINE L1 5604 5849 -1959 25 65 0 0 chr20 9099767 9099813 -63054069 + AT_rich Low_complexity Low_complexity 1 46 0 1857 151 0 26 chr20 9099833 9100138 -63053744 - AluSx SINE Alu -15 297 1 2095 112 33 3 chr20 9100756 9101059 -63052823 + AluSq SINE Alu 2 313 0 193 91 68 0 chr20 9101059 9101103 -63052779 + A-rich Low_complexity Low_complexity 4 180 0 328 293 37 53 chr20 9101123 9101311 -63052571 + Charlie8 DNA MER1_type 86 270 -2147 553 309 27 45 chr20 9101426 9101866 -63052016 + L1MC4a LINE L1 4733 5164 -982 2180 100 0 13 chr20 9101868 9102169 -63051713 + AluSx SINE Alu 1 297 -15 2562 245 34 28 chr20 9102245 9102714 -63051168 + L1MC4a LINE L1 5255 5732 -2076 2080 106 0 45 chr20 9102714 9103026 -63050856 + AluSq SINE Alu 1 298 -15 2562 245 34 28 chr20 9103026 9103316 -63050566 + L1MC4a LINE L1 5732 6019 -1789 333 62 0 0 chr20 9103329 9103377 -63050505 + (TG)n Simple_repeat Simple_repeat 2 49 0 4198 214 90 88 chr20 9103379 9104250 -63049632 + L1MC4a LINE L1 6202 7077 -731 2136 116 3 0 chr20 9104250 9104544 -63049338 + AluSq SINE Alu 1 295 -18 4198 214 90 88 chr20 9104544 9105277 -63048605 + L1MC4a LINE L1 7077 7808 0 198 103 0 0 chr20 9108518 9108547 -63045335 + (TC)n Simple_repeat Simple_repeat 2 30 0 4066 204 13 28 chr20 9108858 9109790 -63044092 - L1MB4 LINE L1 -1 6179 5262 208 238 25 25 chr20 9109881 9109961 -63043921 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 531 221 169 0 chr20 9110151 9110305 -63043577 + MIR SINE MIR 12 191 -71 21 0 0 0 chr20 9111389 9111410 -63042472 + AT_rich Low_complexity Low_complexity 1 21 0 1565 143 0 0 chr20 9114131 9114354 -63039528 + AluSx SINE Alu 3 225 -87 23 0 0 0 chr20 9114481 9114504 -63039378 + AT_rich Low_complexity Low_complexity 1 23 0 332 313 0 27 chr20 9115391 9115503 -63038379 - MIR SINE MIR -105 157 49 1819 266 96 10 chr20 9117198 9117699 -63036183 + MLT1H LTR MaLR 6 549 0 1520 228 35 41 chr20 9117898 9118333 -63035549 + MLT1C LTR MaLR 36 467 0 595 226 315 22 chr20 9118955 9119269 -63034613 + L2 LINE L2 2908 3313 0 337 281 26 53 chr20 9119698 9119812 -63034070 - MIR3 SINE MIR -21 187 77 195 100 0 0 chr20 9119857 9119887 -63033995 + (TG)n Simple_repeat Simple_repeat 1 30 0 7698 22 0 0 chr20 9120364 9121453 -63032429 - L1PA3 LINE L1 -3 6152 5064 13224 33 0 0 chr20 9121453 9123075 -63030807 + L1P LINE L1 2288 3909 -2237 582 221 168 0 chr20 9124249 9124398 -63029484 + MER5A DNA MER1_type 9 182 -7 431 246 44 110 chr20 9124794 9125066 -63028816 - MER112 DNA MER1_type -2 254 1 249 57 0 0 chr20 9126782 9126817 -63027065 + (TG)n Simple_repeat Simple_repeat 1 35 0 844 162 100 189 chr20 9128132 9128571 -63025311 + MER57A LTR ERV1 3 402 -1 478 309 0 8 chr20 9128579 9128705 -63025177 - MER5B DNA MER1_type -52 126 2 21 71 0 0 chr20 9128805 9128847 -63025035 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr20 9131825 9131846 -63022036 + AT_rich Low_complexity Low_complexity 1 21 0 205 167 0 0 chr20 9131882 9131918 -63021964 + (ATG)n Simple_repeat Simple_repeat 1 36 0 1655 277 31 16 chr20 9132576 9133147 -63020735 + L1MB7 LINE L1 1081 1660 -4724 * 5941 191 31 59 chr20 9133133 9134633 -63019249 + L1MC3 LINE L1 5513 6971 -814 1914 168 55 44 chr20 9134633 9135191 -63018691 - MLT2A2 LTR ERVL 0 554 1 3447 205 28 11 chr20 9135191 9135980 -63017902 + L1MC3 LINE L1 6967 7768 -17 551 280 6 17 chr20 9135986 9136161 -63017721 + L1MB7 LINE L1 1652 1824 -4560 249 273 0 0 chr20 9136176 9136253 -63017629 + (TA)n Simple_repeat Simple_repeat 1 77 0 1655 281 56 22 chr20 9136260 9137305 -63016577 + L1MB7 LINE L1 1965 3052 -3330 4635 231 45 52 chr20 9137378 9139047 -63014835 + L1MB7 LINE L1 3619 5275 -1107 547 241 9 0 chr20 9139072 9139188 -63014694 + AluJb SINE Alu 132 248 -64 * 668 170 0 0 chr20 9139186 9139298 -63014584 - AluJo/FLAM SINE Alu -200 112 1 3643 197 49 7 chr20 9139301 9139685 -63014197 + L1MB7 LINE L1 5258 5625 -795 2089 116 3 0 chr20 9139685 9140005 -63013877 + AluSp SINE Alu 1 321 0 3643 197 49 7 chr20 9140005 9140658 -63013224 + L1MB7 LINE L1 5625 6344 -76 25 51 0 0 chr20 9140725 9140764 -63013118 + AT_rich Low_complexity Low_complexity 1 39 0 1029 215 0 5 chr20 9140764 9140964 -63012918 - MER2 DNA MER2_type -139 206 8 398 169 67 0 chr20 9140964 9141053 -63012829 + L1MB8 LINE L1 6082 6176 -2 845 264 45 45 chr20 9141098 9141412 -63012470 - MLT1A1 LTR MaLR 0 365 52 456 260 182 19 chr20 9142570 9142724 -63011158 - MER5A DNA MER1_type -1 188 10 262 348 54 5 chr20 9143354 9143733 -63010149 + LTR16B LTR ERVL 9 452 -9 228 146 0 0 chr20 9144689 9144730 -63009152 + AluJb SINE Alu 256 296 -5 1741 150 7 3 chr20 9144786 9145073 -63008809 - AluSx SINE Alu -1 311 24 1005 226 99 36 chr20 9145115 9145500 -63008382 - LTR37A LTR ERV1 -17 409 1 246 267 27 0 chr20 9145695 9145770 -63008112 + L1ME1 LINE L1 6080 6156 -10 303 272 210 31 chr20 9145823 9146018 -63007864 + L1ME LINE L1 5482 5711 -455 219 295 16 0 chr20 9146180 9146241 -63007641 + MIR SINE MIR 78 139 -69 25 0 0 0 chr20 9146241 9146266 -63007616 + AT_rich Low_complexity Low_complexity 1 25 0 5116 101 0 7 chr20 9146268 9147012 -63006870 - L1PB1 LINE L1 -2 6149 5411 24 0 0 0 chr20 9147428 9147452 -63006430 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr20 9148687 9148708 -63005174 + AT_rich Low_complexity Low_complexity 1 21 0 676 189 0 23 chr20 9148810 9148942 -63004940 + FLAM_C SINE Alu 5 133 0 223 183 49 7 chr20 9149009 9149151 -63004731 + (TA)n Simple_repeat Simple_repeat 2 149 0 23 33 0 0 chr20 9149151 9149181 -63004701 + AT_rich Low_complexity Low_complexity 1 30 0 300 242 73 65 chr20 9149288 9149412 -63004470 - HAL1b LINE L1 -82 1266 1142 256 305 9 9 chr20 9149447 9149552 -63004330 + CT-rich Low_complexity Low_complexity 4 108 0 1621 193 17 32 chr20 9150023 9150370 -63003512 - MER2 DNA MER2_type -1 343 2 21 0 0 0 chr20 9150627 9150648 -63003234 + AT_rich Low_complexity Low_complexity 1 21 0 378 346 32 10 chr20 9153207 9153453 -63000429 + L2 LINE L2 2740 2989 -283 2005 188 57 5 chr20 9153479 9153884 -62999998 + MSTB LTR MaLR 1 426 0 4157 232 85 55 chr20 9153886 9155197 -62998685 + MSTB-int LTR MaLR 3 1352 -228 295 137 0 123 chr20 9155260 9155333 -62998549 - MST-int LTR MaLR -1005 646 583 416 151 0 14 chr20 9155412 9155485 -62998397 - MST-int LTR MaLR -997 654 583 998 189 58 10 chr20 9155488 9155694 -62998188 + MSTB-int LTR MaLR 1436 1651 0 2165 178 28 19 chr20 9155694 9156116 -62997766 + MSTB LTR MaLR 1 426 0 251 246 62 0 chr20 9156179 9156244 -62997638 - LTR33A LTR ERVL -153 370 302 475 299 63 31 chr20 9156301 9156511 -62997371 - LTR33 LTR ERVL -318 203 3 2553 68 0 0 chr20 9157541 9157852 -62996030 + AluY SINE Alu 1 311 0 339 279 39 101 chr20 9157904 9158162 -62995720 + L1ME3 LINE L1 1089 1329 -5097 336 256 44 48 chr20 9158168 9158460 -62995422 + L1ME3 LINE L1 1193 1683 -4924 1544 203 4 0 chr20 9158536 9158802 -62995080 - AluJb SINE Alu -39 273 7 296 290 146 41 chr20 9158830 9159192 -62994690 + L1ME3 LINE L1 1865 2264 -4343 249 25 50 0 chr20 9159309 9159349 -62994533 + Alu SINE Alu 257 298 -3 1073 263 113 42 chr20 9159372 9160505 -62993377 + L1ME3 LINE L1 2390 3602 -2824 1617 283 98 29 chr20 9160555 9163033 -62990849 + L1ME3 LINE L1 3685 6378 -64 237 158 35 18 chr20 9163049 9163106 -62990776 + (TA)n Simple_repeat Simple_repeat 1 58 0 2128 256 47 11 chr20 9163106 9163638 -62990244 - MLT1F1 LTR MaLR -10 557 7 207 69 0 0 chr20 9163644 9163673 -62990209 + (CA)n Simple_repeat Simple_repeat 2 30 0 2419 260 58 13 chr20 9163814 9164716 -62989166 + L1ME1 LINE L1 5225 6163 -3 1098 223 65 87 chr20 9164758 9165161 -62988721 + MSTD LTR MaLR 3 396 0 1556 272 86 2 chr20 9165373 9165792 -62988090 - MLT1H LTR MaLR -8 541 88 397 191 54 176 chr20 9165801 9165923 -62987959 + MER97a DNA MER1_type? 1 90 -804 2401 60 3 0 chr20 9165923 9166223 -62987659 + AluY SINE Alu 3 303 -8 397 191 54 176 chr20 9166223 9166304 -62987578 + MER97a DNA MER1_type? 90 179 -715 184 345 76 41 chr20 9167161 9167332 -62986550 + L2 LINE L2 2915 3091 -181 23 33 0 0 chr20 9167688 9167718 -62986164 + AT_rich Low_complexity Low_complexity 1 30 0 2206 101 7 0 chr20 9168859 9169156 -62984726 + AluSp SINE Alu 1 299 -14 1901 241 97 32 chr20 9169186 9169772 -62984110 - MLT1E2 LTR MaLR 0 626 3 2624 264 38 14 chr20 9169950 9170837 -62983045 + L1MC4 LINE L1 6978 7886 -156 991 253 12 52 chr20 9170961 9171289 -62982593 + L1ME3 LINE L1 5473 5787 -377 660 254 15 5 chr20 9171349 9171546 -62982336 + L1MC4 LINE L1 7310 7508 -534 726 262 55 75 chr20 9171581 9171966 -62981916 + L1ME3 LINE L1 5779 6155 -7 24 0 0 0 chr20 9173274 9173298 -62980584 + AT_rich Low_complexity Low_complexity 1 24 0 540 223 36 54 chr20 9173500 9173666 -62980216 + MER20 DNA MER1_type 4 166 -53 22 35 0 0 chr20 9174035 9174064 -62979818 + AT_rich Low_complexity Low_complexity 1 29 0 405 0 0 0 chr20 9174140 9174185 -62979697 + (CA)n Simple_repeat Simple_repeat 2 46 0 1636 149 19 39 chr20 9174186 9174495 -62979387 - L1MA4A LINE L1 -21 6282 5980 217 169 138 31 chr20 9174767 9174832 -62979050 - MIR SINE MIR -6 256 185 250 346 68 23 chr20 9174915 9175048 -62978834 - MIR SINE MIR -113 149 11 615 323 154 45 chr20 9175605 9176454 -62977428 - L2 LINE L2 -5 3267 2305 2260 98 0 3 chr20 9176517 9176812 -62977070 - AluSg SINE Alu -16 294 1 829 186 19 6 chr20 9176831 9176992 -62976890 + MER3 DNA MER1_type 1 163 -46 1344 218 13 67 chr20 9177038 9177414 -62976468 + MLT1A2 LTR MaLR 15 370 -4 209 275 62 38 chr20 9177425 9177505 -62976377 - L2 LINE L2 -34 3279 3198 181 225 22 11 chr20 9177568 9177657 -62976225 + GA-rich Low_complexity Low_complexity 1 90 0 456 310 113 78 chr20 9177658 9178236 -62975646 - L2 LINE L2 -1135 2179 1566 2542 96 28 6 chr20 9178236 9178592 -62975290 - THE1B LTR MaLR 0 364 1 456 310 113 78 chr20 9178592 9178771 -62975111 - L2 LINE L2 -1748 1566 1395 210 209 0 75 chr20 9179010 9179025 -62974857 + GA-rich Low_complexity Low_complexity 3 18 -46 2171 134 3 0 chr20 9179025 9179331 -62974551 + AluSx SINE Alu 1 307 -5 210 209 0 75 chr20 9179331 9179382 -62974500 + GA-rich Low_complexity Low_complexity 18 64 0 2079 138 26 0 chr20 9180702 9181006 -62972876 + AluSx SINE Alu 1 312 0 234 0 0 0 chr20 9181174 9181200 -62972682 + (T)n Simple_repeat Simple_repeat 1 26 0 1689 134 77 0 chr20 9181667 9181964 -62971918 - AluSx SINE Alu 0 317 1 198 345 0 0 chr20 9182093 9182151 -62971731 - L2 LINE L2 -1 3271 3214 24 32 0 0 chr20 9182482 9182513 -62971369 + AT_rich Low_complexity Low_complexity 1 31 0 269 239 37 46 chr20 9182513 9182622 -62971260 + MER103 DNA DNA 59 166 0 347 283 279 21 chr20 9182886 9183169 -62970713 - L3 LINE CR1 -126 1451 1096 289 308 221 28 chr20 9183223 9183545 -62970337 - L3 LINE CR1 -632 945 562 832 163 8 143 chr20 9184026 9184278 -62969604 - MER20 DNA MER1_type -1 218 1 427 145 0 40 chr20 9184500 9184576 -62969306 + Charlie3 DNA MER1_type 2637 2709 -1 279 0 0 0 chr20 9187869 9187900 -62965982 + (CA)n Simple_repeat Simple_repeat 1 31 0 406 300 45 37 chr20 9188402 9188604 -62965278 + MIR SINE MIR 20 232 -30 2506 119 11 3 chr20 9189927 9190297 -62963585 - THE1C LTR MaLR 0 375 3 9241 129 36 52 chr20 9190307 9191392 -62962490 - THE1C-int LTR MaLR -9 1571 519 2389 62 0 0 chr20 9191392 9191680 -62962202 - AluY SINE Alu -2 309 22 9241 129 36 52 chr20 9191680 9192191 -62961691 - THE1C-int LTR MaLR -1061 519 1 2378 119 10 44 chr20 9192191 9192579 -62961303 - THE1C LTR MaLR 0 375 1 29 78 0 0 chr20 9192930 9192994 -62960888 + AT_rich Low_complexity Low_complexity 1 64 0 238 418 0 0 chr20 9193026 9193136 -62960746 + MIR SINE MIR 46 155 -107 1415 191 36 22 chr20 9193566 9193844 -62960038 - AluJo SINE Alu -30 282 1 270 81 0 0 chr20 9194925 9194962 -62958920 + (CA)n Simple_repeat Simple_repeat 2 38 0 218 241 11 0 chr20 9195033 9195120 -62958762 + (TA)n Simple_repeat Simple_repeat 2 89 0 234 318 15 0 chr20 9196743 9196809 -62957073 - L2 LINE L2 0 3313 3247 22 70 0 0 chr20 9198751 9198794 -62955088 + AT_rich Low_complexity Low_complexity 1 43 0 198 171 0 0 chr20 9199447 9199488 -62954394 + (CA)n Simple_repeat Simple_repeat 2 42 0 250 232 0 36 chr20 9200146 9200202 -62953680 + L2 LINE L2 3207 3260 -12 368 366 67 5 chr20 9201366 9201560 -62952322 + MIR SINE MIR 47 252 -10 202 98 24 49 chr20 9201580 9201621 -62952261 + (TTG)n Simple_repeat Simple_repeat 3 42 0 590 332 74 16 chr20 9201678 9201922 -62951960 + MIR SINE MIR 5 262 0 529 198 83 13 chr20 9202690 9202847 -62951035 + L1MDa LINE L1 1696 1863 -4677 2507 158 30 20 chr20 9202847 9203411 -62950471 - MER41B LTR ERV1 0 635 1 994 242 180 39 chr20 9203411 9203928 -62949954 + L1MDa LINE L1 1860 2449 -4091 4574 243 67 49 chr20 9203945 9204859 -62949023 + L1MDa LINE L1 2830 3726 -2814 2191 122 3 0 chr20 9204859 9205163 -62948719 + AluSq SINE Alu 1 305 -8 4574 243 67 49 chr20 9205163 9205461 -62948421 + L1MDa LINE L1 3726 4017 -2523 192 77 0 0 chr20 9205461 9205487 -62948395 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4574 243 67 49 chr20 9205487 9206417 -62947465 + L1MDa LINE L1 4017 5011 -1529 756 276 18 25 chr20 9206403 9206421 -62947461 - L1M4 LINE L1 -1224 4922 4905 * 2730 128 20 39 chr20 9206421 9206928 -62946954 - L1MA7 LINE L1 -10 6281 5785 756 276 18 25 chr20 9206928 9207184 -62946698 - L1M4 LINE L1 -1241 4905 4650 * 4688 173 44 19 chr20 9207171 9208105 -62945777 - L1MA7 LINE L1 -752 5394 4430 2241 125 0 6 chr20 9208105 9208418 -62945464 - AluSx SINE Alu 0 312 2 4688 173 44 19 chr20 9208418 9208510 -62945372 - L1MA7 LINE L1 -1716 4430 4342 1801 255 44 16 chr20 9208508 9209219 -62944663 + L1MDa LINE L1 4998 5733 -841 * 1255 191 14 97 chr20 9209208 9209559 -62944323 + L1MD2 LINE L1 6037 6358 -1 * 186 184 0 0 chr20 9210520 9210558 -62943324 + L2 LINE L2 3276 3313 0 427 315 95 17 chr20 9210942 9211183 -62942699 - MIR SINE MIR -2 260 1 188 339 32 0 chr20 9211188 9211250 -62942632 + MIR3 SINE MIR 139 202 -6 2158 112 32 61 chr20 9211691 9211764 -62942118 - THE1B LTR MaLR 0 364 290 2135 51 0 111 chr20 9211764 9212096 -62941786 + AluY SINE Alu 1 295 -16 2158 112 32 61 chr20 9212096 9212397 -62941485 - THE1B LTR MaLR -74 290 1 1555 186 58 0 chr20 9213193 9213312 -62940570 + AluJo SINE Alu 1 112 -200 189 0 0 0 chr20 9213312 9213333 -62940549 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1555 186 58 0 chr20 9213333 9213487 -62940395 + AluJo SINE Alu 112 290 -22 348 140 87 0 chr20 9213610 9213644 -62940238 + L1M4 LINE L1 5227 5257 -900 246 62 0 0 chr20 9213644 9213676 -62940206 + (CA)n Simple_repeat Simple_repeat 2 33 0 348 140 87 0 chr20 9213676 9213737 -62940145 + L1M4 LINE L1 5257 5340 -817 794 209 13 6 chr20 9213867 9214025 -62939857 + L1MB5 LINE L1 5976 6134 -40 273 256 0 0 chr20 9214628 9214710 -62939172 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 188 108 0 27 chr20 9215262 9215299 -62938583 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 662 209 60 45 chr20 9215697 9215898 -62937984 + MER3 DNA MER1_type 6 209 0 909 247 5 0 chr20 9216554 9216740 -62937142 - MER5A DNA MER1_type -2 187 1 3594 52 0 0 chr20 9216742 9217185 -62936697 + L1PA5 LINE L1 5701 6143 -11 424 198 25 0 chr20 9217387 9217468 -62936414 - MER5A DNA MER1_type -78 111 29 1998 125 7 4 chr20 9217800 9218103 -62935779 + AluSx SINE Alu 5 308 0 282 197 0 16 chr20 9221032 9221093 -62932789 - L1M4 LINE L1 -477 5697 5638 * 998 199 29 42 chr20 9221085 9221326 -62932556 + L1MB5 LINE L1 5930 6167 -7 363 271 35 69 chr20 9221917 9222061 -62931821 - MIR SINE MIR -50 212 74 2038 127 10 58 chr20 9222070 9222464 -62931418 - THE1C LTR MaLR 0 375 1 1210 193 161 67 chr20 9223159 9223605 -62930277 - MLT1D LTR MaLR 0 505 18 436 252 21 42 chr20 9223932 9224075 -62929807 + MIR SINE MIR 77 216 -46 1983 271 66 47 chr20 9224555 9225150 -62928732 - HAL1 LINE L1 -590 1917 1335 637 199 8 23 chr20 9225150 9225281 -62928601 - FLAM_A SINE Alu -4 129 1 1983 271 66 47 chr20 9225281 9225838 -62928044 - HAL1 LINE L1 -1172 1335 743 1726 179 89 0 chr20 9226186 9226510 -62927372 + MSTA LTR MaLR 76 428 0 207 69 0 0 chr20 9226525 9226554 -62927328 + (T)n Simple_repeat Simple_repeat 1 29 0 3299 141 13 30 chr20 9226799 9227360 -62926522 - L1PA15 LINE L1 0 6165 5613 2221 122 3 0 chr20 9227360 9227672 -62926210 - AluSp SINE Alu 0 313 1 3299 141 13 30 chr20 9227672 9227720 -62926162 - L1PA15 LINE L1 -552 5613 5566 5964 227 26 27 chr20 9227720 9229932 -62923950 - L1PA13 LINE L1 -3036 3761 1535 481 259 22 44 chr20 9229931 9230066 -62923816 - L1PA13 LINE L1 -6564 223 92 * 25 90 0 0 chr20 9230837 9230904 -62922978 + AT_rich Low_complexity Low_complexity 1 67 0 10761 32 2 1 chr20 9231384 9233448 -62920434 + L1PA4 LINE L1 4092 6155 0 433 302 60 7 chr20 9233586 9233735 -62920147 - MIR SINE MIR -74 188 32 348 317 35 18 chr20 9234577 9234804 -62919078 + L1ME4a LINE L1 5515 5745 -376 358 213 107 41 chr20 9234826 9234948 -62918934 + L1ME4a LINE L1 5974 6103 -18 183 359 77 26 chr20 9235094 9235211 -62918671 - L2 LINE L2 -188 3084 2962 1875 89 114 0 chr20 9235522 9235793 -62918089 + AluSc SINE Alu 1 302 -7 1759 144 75 39 chr20 9236333 9236695 -62917187 - THE1C LTR MaLR 0 375 1 9536 127 20 44 chr20 9236696 9237884 -62915998 - THE1C-int LTR MaLR -1 1579 437 1992 141 3 3 chr20 9237884 9238202 -62915680 + AluSx SINE Alu 1 318 0 9536 127 20 44 chr20 9238202 9238629 -62915253 - THE1C-int LTR MaLR -1143 437 1 1678 151 91 26 chr20 9238629 9238981 -62914901 - THE1C LTR MaLR 0 375 1 193 333 91 30 chr20 9241933 9242065 -62911817 - MIR3 SINE MIR -53 155 16 23 0 0 0 chr20 9242356 9242379 -62911503 + AT_rich Low_complexity Low_complexity 1 23 0 2418 77 3 3 chr20 9242568 9242879 -62911003 - AluY SINE Alu 0 311 1 23 78 0 0 chr20 9243251 9243302 -62910580 + AT_rich Low_complexity Low_complexity 1 51 0 623 292 171 13 chr20 9243532 9243837 -62910045 + MLT1K LTR MaLR 173 525 -63 221 0 0 33 chr20 9244277 9244307 -62909575 + (TAA)n Simple_repeat Simple_repeat 2 30 0 190 374 58 19 chr20 9244414 9244569 -62909313 + L2 LINE L2 2865 3025 -247 1299 221 10 3 chr20 9247882 9248190 -62905692 - MER33 DNA MER1_type 0 324 15 180 277 46 15 chr20 9248560 9248625 -62905257 + L2 LINE L2 3194 3260 -12 22 0 0 0 chr20 9248959 9248981 -62904901 + AT_rich Low_complexity Low_complexity 1 22 0 483 232 42 36 chr20 9249215 9249383 -62904499 + MIR SINE MIR 91 259 -3 205 365 17 26 chr20 9250368 9250483 -62903399 + MIR SINE MIR 29 142 -120 1666 172 34 30 chr20 9250736 9251033 -62902849 + AluJo SINE Alu 1 298 -14 201 290 84 46 chr20 9251060 9251191 -62902691 - MIR SINE MIR -46 216 81 307 390 13 6 chr20 9251646 9251805 -62902077 + MIR SINE MIR 37 196 -66 189 0 0 0 chr20 9251932 9251953 -62901929 + (TTA)n Simple_repeat Simple_repeat 2 22 0 365 371 45 0 chr20 9253417 9253619 -62900263 + MIR SINE MIR 51 261 -1 31 58 0 0 chr20 9255776 9255828 -62898054 + AT_rich Low_complexity Low_complexity 1 52 0 184 91 45 0 chr20 9256102 9256146 -62897736 + (TA)n Simple_repeat Simple_repeat 1 46 0 2392 84 0 3 chr20 9256378 9256677 -62897205 - AluSc SINE Alu -11 298 1 822 316 68 38 chr20 9257162 9258003 -62895879 - L2 LINE L2 -1 3312 2437 1109 185 99 30 chr20 9258585 9258887 -62894995 - MER33 DNA MER1_type 0 324 2 204 40 0 0 chr20 9258901 9258926 -62894956 + (TG)n Simple_repeat Simple_repeat 1 25 0 3246 164 43 3 chr20 9258937 9259518 -62894364 + MER6A DNA MER2_type 2 605 0 2311 97 3 3 chr20 9259580 9259889 -62893993 + AluSc SINE Alu 1 309 0 2458 110 30 0 chr20 9260548 9260912 -62892970 - THE1C LTR MaLR 0 375 1 251 344 104 8 chr20 9261761 9261886 -62891996 + MIR SINE MIR 19 155 -107 21 36 0 0 chr20 9263476 9263504 -62890378 + AT_rich Low_complexity Low_complexity 1 28 0 486 49 0 0 chr20 9264962 9265023 -62888859 + (TTCTC)n Simple_repeat Simple_repeat 4 64 0 264 122 0 0 chr20 9265037 9265078 -62888804 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 1561 177 17 17 chr20 9265737 9266025 -62887857 + AluJb SINE Alu 4 291 -21 236 118 0 20 chr20 9266084 9266135 -62887747 + (CA)n Simple_repeat Simple_repeat 2 51 0 355 224 49 14 chr20 9266242 9266385 -62887497 + (TTATA)n Simple_repeat Simple_repeat 5 152 0 181 286 0 0 chr20 9269099 9269141 -62884741 - L2 LINE L2 -7 3265 3224 213 291 73 27 chr20 9270379 9270489 -62883393 - MIR3 SINE MIR -19 189 75 502 321 57 25 chr20 9272709 9272868 -62881014 - MER91A DNA MER1_type -32 164 1 262 219 73 89 chr20 9275021 9275069 -62878813 + MIR SINE MIR 22 69 -193 1118 206 99 19 chr20 9275069 9275355 -62878527 - AluJo SINE Alu 0 307 1 262 219 73 89 chr20 9275355 9275428 -62878454 + MIR SINE MIR 69 142 -120 1733 165 4 4 chr20 9275503 9275776 -62878106 + AluSx SINE Alu 1 273 -39 21 0 0 0 chr20 9276170 9276191 -62877691 + AT_rich Low_complexity Low_complexity 1 21 0 5977 6 0 0 chr20 9276197 9276863 -62877019 + L1PA2 LINE L1 5490 6155 0 189 0 0 0 chr20 9276868 9276889 -62876993 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 43123 28 23 1 chr20 9279339 9285357 -62868525 + L1HS LINE L1 2 6155 0 243 0 0 0 chr20 9285370 9285397 -62868485 + (A)n Simple_repeat Simple_repeat 1 27 0 413 256 95 70 chr20 9286355 9286597 -62867285 - L1ME3A LINE L1 -9 6161 5914 381 298 224 0 chr20 9286835 9287040 -62866842 - MIR SINE MIR 0 262 12 188 220 80 20 chr20 9287134 9287184 -62866698 + L3 LINE CR1 1431 1483 -94 738 160 29 130 chr20 9287378 9287616 -62866266 + MER20 DNA MER1_type 6 219 0 362 250 162 27 chr20 9288146 9288294 -62865588 - MER5A DNA MER1_type 0 189 22 2178 116 0 0 chr20 9290420 9290713 -62863169 - AluSq SINE Alu -20 293 1 1068 238 33 119 chr20 9290984 9291564 -62862318 - L1MC4 LINE L1 -26 8016 7487 25 65 0 0 chr20 9291665 9291711 -62862171 + AT_rich Low_complexity Low_complexity 1 46 0 2476 70 0 0 chr20 9291803 9292102 -62861780 - AluY SINE Alu -12 299 1 21 0 0 0 chr20 9292501 9292522 -62861360 + AT_rich Low_complexity Low_complexity 1 21 0 287 322 68 17 chr20 9292973 9293091 -62860791 - L2 LINE L2 0 3313 3190 295 269 81 62 chr20 9293414 9293574 -62860308 - MIR SINE MIR -74 188 26 771 253 55 46 chr20 9293771 9294101 -62859781 - L1ME2 LINE L1 -5 6161 5832 1438 229 11 4 chr20 9294114 9294393 -62859489 - MLT1A1 LTR MaLR 0 365 85 435 207 24 0 chr20 9294440 9294522 -62859360 - MLT1A1 LTR MaLR -285 89 6 924 222 77 42 chr20 9294525 9294836 -62859046 - L1ME2 LINE L1 -323 5841 5520 209 233 0 0 chr20 9294836 9294879 -62859003 + (TA)n Simple_repeat Simple_repeat 2 44 0 315 311 0 0 chr20 9294879 9294969 -62858913 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr20 9294978 9295002 -62858880 + (TA)n Simple_repeat Simple_repeat 1 24 0 2214 136 3 6 chr20 9295015 9295369 -62858513 + L1PB1 LINE L1 5791 6143 -8 23 0 0 0 chr20 9295369 9295392 -62858490 + AT_rich Low_complexity Low_complexity 1 23 0 2177 92 0 52 chr20 9295484 9295811 -62858071 - AluY SINE Alu -1 310 1 423 0 0 0 chr20 9296179 9296226 -62857656 + (TG)n Simple_repeat Simple_repeat 2 48 0 30 93 0 0 chr20 9296666 9296752 -62857130 + AT_rich Low_complexity Low_complexity 1 86 0 248 274 216 20 chr20 9296999 9297152 -62856730 - LTR41 LTR ERVL -7 766 584 503 199 62 43 chr20 9297714 9297875 -62856007 - LTR41 LTR ERVL -609 164 1 4036 114 14 3 chr20 9298105 9298738 -62855144 - L1MA1 LINE L1 0 6302 5663 1687 79 31 0 chr20 9298777 9299005 -62854877 - L1M1 LINE L1 -554 7167 6933 1122 119 0 43 chr20 9299017 9299202 -62854680 - AluSc SINE Alu -1 308 132 13846 186 40 14 chr20 9299206 9305374 -62848508 - L1M1 LINE L1 -752 6813 515 2378 78 7 3 chr20 9305374 9305681 -62848201 + AluSc SINE Alu 1 308 -1 13846 186 40 14 chr20 9305681 9306107 -62847775 - L1M1 LINE L1 -7050 515 102 2464 291 30 39 chr20 9306132 9306995 -62846887 - HERVL LTR ERVL -648 5116 4262 4005 181 39 6 chr20 9306995 9307896 -62845986 + L1PB4 LINE L1 5131 6065 -91 650 236 55 12 chr20 9307962 9308127 -62845755 - HERVL LTR ERVL -1497 4267 4096 955 153 101 5 chr20 9308149 9308358 -62845524 - L1MA9 LINE L1 0 6312 6084 1027 246 11 19 chr20 9308371 9308639 -62845243 - HERVL LTR ERVL -1657 3997 3732 330 350 32 6 chr20 9308994 9309151 -62844731 - HERVL LTR ERVL -4983 671 511 198 0 0 0 chr20 9309397 9309419 -62844463 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1448 232 69 43 chr20 9309709 9310170 -62843712 + MLT1D LTR MaLR 31 503 -2 618 220 19 31 chr20 9310890 9311049 -62842833 - LTR41 LTR ERVL -609 164 8 1138 297 24 29 chr20 9311067 9311559 -62842323 - L1MC4 LINE L1 -303 7739 7250 484 202 18 30 chr20 9311559 9311727 -62842155 + CT-rich Low_complexity Low_complexity 1 166 0 301 260 62 0 chr20 9311733 9311829 -62842053 - L1MC4 LINE L1 -937 7105 7004 3797 197 40 16 chr20 9311838 9312705 -62841177 - L1MB5 LINE L1 0 6672 5785 935 209 5 0 chr20 9312714 9312924 -62840958 - L1MB5 LINE L1 -1093 5551 5341 1806 262 21 7 chr20 9312929 9313509 -62840373 - L1MB5 LINE L1 -1616 5028 4441 888 324 81 40 chr20 9313484 9314185 -62839697 - L1MB5 LINE L1 -5736 806 77 * 269 342 37 104 chr20 9314501 9314884 -62838998 - L2 LINE L2 -2 3270 2914 473 246 14 5 chr20 9315201 9315430 -62838452 + GA-rich Low_complexity Low_complexity 1 231 0 201 392 0 25 chr20 9315348 9315468 -62838414 + G-rich Low_complexity Low_complexity 5 121 0 * 519 168 26 26 chr20 9315472 9315627 -62838255 + GA-rich Low_complexity Low_complexity 4 158 0 25 0 0 0 chr20 9316369 9316394 -62837488 + AT_rich Low_complexity Low_complexity 1 25 0 2141 156 60 26 chr20 9316629 9317097 -62836785 + L1MB3 LINE L1 5697 6180 -3 25 75 0 0 chr20 9318395 9318448 -62835434 + AT_rich Low_complexity Low_complexity 1 53 0 254 291 17 109 chr20 9318611 9318698 -62835184 + MIR3 SINE MIR 7 72 -136 470 299 44 29 chr20 9318698 9318902 -62834980 + MER63A DNA MER1_type 1 207 -3 254 291 17 109 chr20 9318902 9318989 -62834893 + MIR3 SINE MIR 72 165 -43 426 297 61 12 chr20 9321008 9321173 -62832709 + MIR SINE MIR 29 201 -61 988 246 80 42 chr20 9322036 9322397 -62831485 - LTR16A1 LTR ERVL 0 457 83 360 270 35 40 chr20 9322743 9322917 -62830965 + MER46C DNA MER2_type 82 254 -84 22 0 0 0 chr20 9322952 9322974 -62830908 + AT_rich Low_complexity Low_complexity 1 22 0 304 352 125 36 chr20 9323157 9323461 -62830421 - L3 LINE CR1 -65 1512 1182 332 304 54 0 chr20 9323919 9324011 -62829871 + L2 LINE L2 3190 3286 -27 22 0 0 0 chr20 9324811 9324833 -62829049 + AT_rich Low_complexity Low_complexity 1 22 0 26 74 0 0 chr20 9325830 9325884 -62827998 + AT_rich Low_complexity Low_complexity 1 54 0 229 346 90 26 chr20 9325903 9326059 -62827823 + MIR3 SINE MIR 40 205 -3 237 65 0 0 chr20 9326189 9326220 -62827662 + (CA)n Simple_repeat Simple_repeat 2 32 0 691 274 29 19 chr20 9326283 9326467 -62827415 - MER63A DNA MER1_type -1478 210 22 2614 176 43 43 chr20 9326467 9327029 -62826853 + MER68 LTR ERV1 1 562 0 691 274 29 19 chr20 9327029 9327052 -62826830 - MER63A DNA MER1_type -1666 22 1 192 40 0 0 chr20 9327171 9327196 -62826686 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr20 9327360 9327388 -62826494 + AT_rich Low_complexity Low_complexity 1 28 0 2144 118 36 36 chr20 9327444 9327808 -62826074 - THE1B LTR MaLR 0 364 1 9704 106 93 1 chr20 9327808 9329252 -62824630 - THE1B-int LTR MaLR 0 1580 3 2129 137 42 25 chr20 9329254 9329612 -62824270 - THE1B LTR MaLR 0 364 1 369 215 0 0 chr20 9330644 9330737 -62823145 + (TA)n Simple_repeat Simple_repeat 2 94 0 249 327 95 39 chr20 9331324 9331660 -62822222 + L2 LINE L2 550 904 -2410 1264 197 39 55 chr20 9331728 9332037 -62821845 - AluJo SINE Alu -8 304 1 1753 204 33 3 chr20 9332580 9332948 -62820934 - L1MB5 LINE L1 -8 6166 5788 291 157 0 0 chr20 9332956 9333007 -62820875 + (TA)n Simple_repeat Simple_repeat 1 51 0 1899 109 29 7 chr20 9333021 9333296 -62820586 + THE1B LTR MaLR 84 364 0 656 251 5 44 chr20 9333324 9333527 -62820355 - L1M4 LINE L1 -5506 1036 842 807 33 17 25 chr20 9333545 9333665 -62820217 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 406 125 0 0 chr20 9333665 9333721 -62820161 - AluJo SINE Alu -32 280 225 * 795 216 0 6 chr20 9333719 9333881 -62820001 - AluJo SINE Alu -151 161 1 492 279 0 0 chr20 9333897 9334019 -62819863 - L1M4 LINE L1 -5788 754 633 1696 216 8 8 chr20 9334700 9335065 -62818817 + MLT1A1 LTR MaLR 1 365 0 2380 32 0 0 chr20 9336713 9336995 -62816887 + L1PA4 LINE L1 5864 6145 -10 271 267 112 9 chr20 9337151 9337267 -62816615 + MER5C DNA MER1_type 4 131 -193 1403 204 7 25 chr20 9337454 9337734 -62816148 + L1MDa LINE L1 15 289 -6251 337 253 0 0 chr20 9337719 9337794 -62816088 + L1M4 LINE L1 3508 3582 -2564 * 386 276 29 12 chr20 9337791 9337961 -62815921 + L1M4 LINE L1 4339 4511 -1635 619 341 101 31 chr20 9339344 9339799 -62814083 + LTR16C LTR ERVL 5 491 0 562 319 173 35 chr20 9339802 9340178 -62813704 + MLT1K LTR MaLR 157 584 -4 262 273 162 32 chr20 9341741 9341895 -62811987 - MLT1H LTR MaLR -4 545 372 377 299 138 24 chr20 9342253 9342420 -62811462 + MER63A DNA MER1_type 22 207 -3 24 32 0 0 chr20 9343642 9343673 -62810209 + AT_rich Low_complexity Low_complexity 1 31 0 1050 213 29 42 chr20 9343824 9344063 -62809819 + AluJb SINE Alu 65 300 -12 2245 116 0 0 chr20 9345720 9346030 -62807852 + AluSg SINE Alu 1 310 0 1846 144 0 21 chr20 9346210 9346579 -62807303 - AluSx SINE Alu 0 367 5 467 143 12 12 chr20 9346737 9346821 -62807061 - AluJ/FLAM SINE Alu -226 86 3 968 117 0 21 chr20 9346913 9347058 -62806824 + AluSg/x SINE Alu 154 295 -15 26 74 0 0 chr20 9347742 9347796 -62806086 + AT_rich Low_complexity Low_complexity 1 54 0 225 339 68 8 chr20 9348041 9348159 -62805723 - L2 LINE L2 -12 3260 3136 3294 138 15 4 chr20 9348191 9348740 -62805142 - L1MB1 LINE L1 -1 6167 5613 1649 169 36 36 chr20 9350140 9350442 -62803440 + AluJo SINE Alu 6 307 -5 21 57 0 0 chr20 9351875 9351910 -62801972 + AT_rich Low_complexity Low_complexity 1 35 0 181 189 11 44 chr20 9351978 9352068 -62801814 + (TA)n Simple_repeat Simple_repeat 2 88 0 742 210 55 110 chr20 9353511 9353645 -62800237 + MER5A DNA MER1_type 1 122 -67 1678 98 140 11 chr20 9353645 9353910 -62799972 - AluSg SINE Alu -1 299 1 742 210 55 110 chr20 9353910 9353975 -62799907 + MER5A DNA MER1_type 122 189 0 261 308 83 19 chr20 9354807 9354963 -62798919 + MIR SINE MIR 97 262 0 228 159 95 0 chr20 9354978 9355041 -62798841 + L1MC4 LINE L1 6624 6692 -1350 192 40 0 0 chr20 9355044 9355069 -62798813 + (GA)n Simple_repeat Simple_repeat 2 26 0 1345 224 22 32 chr20 9355078 9355390 -62798492 - MLT2D LTR ERVL -105 309 1 361 292 10 10 chr20 9356057 9356153 -62797729 + MER5A DNA MER1_type 1 96 -93 2832 221 70 44 chr20 9356204 9357151 -62796731 + L1MDa LINE L1 998 1974 -4566 2250 107 3 0 chr20 9357151 9357450 -62796432 - AluSx SINE Alu -12 300 1 2832 221 70 44 chr20 9357450 9357496 -62796386 + L1MDa LINE L1 1974 2017 -4523 372 306 100 0 chr20 9357515 9357675 -62796207 + MLT1J1 LTR MaLR 9 184 -262 291 279 82 93 chr20 9357717 9357900 -62795982 + MLT1J2 LTR MaLR 263 443 -7 180 111 0 0 chr20 9358682 9358709 -62795173 + (GA)n Simple_repeat Simple_repeat 2 28 0 1477 198 128 22 chr20 9359896 9360254 -62793628 + MSTD LTR MaLR 1 396 0 207 100 0 0 chr20 9360728 9360758 -62793124 + (TAA)n Simple_repeat Simple_repeat 3 32 0 297 314 109 7 chr20 9360767 9360904 -62792978 - MIR SINE MIR -17 245 95 249 308 23 85 chr20 9360969 9361030 -62792852 - L2 LINE L2 0 3272 3222 1198 188 109 10 chr20 9361030 9361323 -62792559 - MER33 DNA MER1_type -2 322 1 249 308 23 85 chr20 9361323 9361391 -62792491 - L2 LINE L2 -50 3222 3151 * 1033 292 62 22 chr20 9361382 9361783 -62792099 - L2 LINE L2 -367 2947 2531 827 247 25 81 chr20 9361897 9362290 -62791592 + LTR37B LTR ERV1 98 468 0 290 231 93 19 chr20 9363381 9363489 -62790393 - MLT1H LTR MaLR -15 534 419 2586 46 0 3 chr20 9363701 9364005 -62789877 + AluY SINE Alu 1 303 -8 21 0 0 0 chr20 9364033 9364054 -62789828 + AT_rich Low_complexity Low_complexity 1 21 0 230 209 0 0 chr20 9364075 9364118 -62789764 - MLT1H LTR MaLR -387 162 120 839 194 57 110 chr20 9364801 9365064 -62788818 + AluJo SINE Alu 30 278 -34 463 185 19 9 chr20 9365081 9365189 -62788693 - L1MB7 LINE L1 -27 6157 6049 * 6196 164 30 5 chr20 9365188 9365873 -62788009 + L1M1 LINE L1 10 731 -6834 186 43 0 0 chr20 9365873 9365896 -62787986 + (GGAGA)n Simple_repeat Simple_repeat 4 26 0 6196 164 30 5 chr20 9365896 9366237 -62787645 + L1M1 LINE L1 731 1062 -6503 535 242 181 74 chr20 9366941 9367310 -62786572 + L2 LINE L2 2622 3030 -283 182 292 180 11 chr20 9367803 9367892 -62785990 + MIR3 SINE MIR 2 105 -103 642 113 0 10 chr20 9367973 9368099 -62785783 + FLAM_A SINE Alu 19 143 0 4823 254 63 47 chr20 9368246 9370070 -62783812 - L1M4c LINE L1 -4602 2355 560 1786 105 0 8 chr20 9370070 9370318 -62783564 + AluSg SINE Alu 32 277 -33 186 43 0 0 chr20 9370323 9370346 -62783536 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4823 254 63 47 chr20 9370346 9370848 -62783034 - L1M4c LINE L1 -6400 557 11 226 325 72 0 chr20 9371133 9371216 -62782666 - MIR SINE MIR -171 91 3 287 339 62 0 chr20 9371305 9371435 -62782447 + MIR SINE MIR 91 228 -34 473 268 203 7 chr20 9371896 9372049 -62781833 + MER5A DNA MER1_type 3 185 -4 254 350 38 42 chr20 9372316 9372553 -62781329 + L2 LINE L2 2877 3112 -160 733 184 13 0 chr20 9372556 9372790 -62781092 + CT-rich Low_complexity Low_complexity 1 237 0 293 346 0 0 chr20 9372850 9372928 -62780954 + L2 LINE L2 3133 3210 -62 517 252 9 0 chr20 9373061 9373172 -62780710 - L2 LINE L2 -12 3301 3190 31 82 0 0 chr20 9373451 9373524 -62780358 + AT_rich Low_complexity Low_complexity 1 73 0 6287 171 26 27 chr20 9373621 9373657 -62780225 - L1MA4A LINE L1 -6 6999 6964 2292 120 50 36 chr20 9373657 9374016 -62779866 + THE1B LTR MaLR 1 364 0 6287 171 26 27 chr20 9374016 9374375 -62779507 - L1MA4A LINE L1 -41 6964 6606 1717 167 0 14 chr20 9374375 9374663 -62779219 + AluSx SINE Alu 1 284 -28 216 0 0 0 chr20 9374666 9374690 -62779192 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 6287 171 26 27 chr20 9374690 9376702 -62777180 - L1MA4A LINE L1 -401 6604 4582 5547 219 52 12 chr20 9376704 9377991 -62775891 - L1MA4A LINE L1 -4724 2125 787 1534 201 7 14 chr20 9378527 9378816 -62775066 - AluJb SINE Alu -25 287 1 219 188 0 0 chr20 9378991 9379091 -62774791 + GA-rich Low_complexity Low_complexity 1 100 0 29 28 0 0 chr20 9379182 9379218 -62774664 + AT_rich Low_complexity Low_complexity 1 36 0 21 82 0 0 chr20 9379624 9379673 -62774209 + AT_rich Low_complexity Low_complexity 1 49 0 223 122 41 0 chr20 9380084 9380133 -62773749 + (TTAAA)n Simple_repeat Simple_repeat 2 52 0 1622 175 0 14 chr20 9380788 9381079 -62772803 - AluJb SINE Alu -25 287 1 621 289 83 14 chr20 9381659 9381877 -62772005 + MIR SINE MIR 4 236 -26 685 258 46 116 chr20 9383350 9383695 -62770187 + MLT1G LTR MaLR 2 322 -273 338 265 20 10 chr20 9383803 9383901 -62769981 + MLT1G LTR MaLR 444 542 -13 3385 226 71 29 chr20 9384154 9385025 -62768857 + L1M4 LINE L1 14 921 -5621 24 53 0 0 chr20 9385207 9385245 -62768637 + AT_rich Low_complexity Low_complexity 1 38 0 318 258 21 11 chr20 9385471 9385564 -62768318 - L1M4 LINE L1 -3600 2546 2453 180 0 0 0 chr20 9385701 9385721 -62768161 + (TTG)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr20 9385891 9385919 -62767963 + AT_rich Low_complexity Low_complexity 1 28 0 424 159 45 144 chr20 9386171 9386303 -62767579 + L1M4 LINE L1 587 705 -5837 326 244 24 0 chr20 9387582 9387664 -62766218 + MER81 DNA DNA 31 114 0 1200 66 28 44 chr20 9387740 9387921 -62765961 + L1PA11 LINE L1 5996 6173 -1 1496 330 33 22 chr20 9387933 9388536 -62765346 + ERVL LTR ERVL 3135 3744 -2020 558 333 40 35 chr20 9388596 9389001 -62764881 + ERVL LTR ERVL 4788 5194 -570 1188 58 17 6 chr20 9390342 9390516 -62763366 + (TTTC)n Simple_repeat Simple_repeat 1 176 0 1928 157 7 0 chr20 9390521 9390827 -62763055 - AluSx SINE Alu -4 308 1 492 188 45 0 chr20 9391016 9391128 -62762754 - L1MA8 LINE L1 -5 6286 6170 21 0 0 0 chr20 9391159 9391180 -62762702 + AT_rich Low_complexity Low_complexity 1 21 0 537 239 54 129 chr20 9392178 9392550 -62761332 - MLT1H LTR MaLR -165 384 41 1524 187 22 4 chr20 9393604 9393882 -62760000 - AluJo SINE Alu -29 283 1 1078 201 62 0 chr20 9393902 9394111 -62759771 + AluJo SINE Alu 79 300 -12 2181 120 3 0 chr20 9394427 9394727 -62759155 - AluSx SINE Alu -11 301 1 1540 249 60 40 chr20 9394727 9395477 -62758405 - L1M4 LINE L1 -2293 3853 3089 308 296 75 14 chr20 9395749 9396024 -62757858 - MER20B DNA MER1_type -432 351 1 776 213 58 16 chr20 9396032 9396220 -62757662 + MER3 DNA MER1_type 1 196 -13 577 333 162 19 chr20 9396430 9396899 -62756983 - L3 LINE CR1 -698 879 344 410 311 22 15 chr20 9396904 9397039 -62756843 - MIR SINE MIR -102 160 25 260 173 113 196 chr20 9397046 9397179 -62756703 + MLT1E LTR MaLR 1 122 -471 2103 111 7 3 chr20 9397515 9397803 -62756079 - AluSx SINE Alu -23 289 1 403 300 111 12 chr20 9397960 9398213 -62755669 + L1ME4a LINE L1 5558 5835 -286 200 167 45 30 chr20 9398236 9398302 -62755580 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 21 0 0 0 chr20 9398455 9398476 -62755406 + AT_rich Low_complexity Low_complexity 1 21 0 2069 133 0 10 chr20 9399037 9399339 -62754543 - AluSc SINE Alu -10 299 1 246 226 19 0 chr20 9399812 9399865 -62754017 + GA-rich Low_complexity Low_complexity 2 55 0 568 297 53 19 chr20 9401499 9401708 -62752174 - MIR SINE MIR 0 262 47 320 60 75 0 chr20 9401817 9401884 -62751998 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 284 280 5 0 chr20 9403883 9403973 -62749909 + MIR SINE MIR 98 187 -62 291 268 0 61 chr20 9404906 9404988 -62748894 - L2 LINE L2 0 3313 3237 2203 98 0 32 chr20 9405368 9405684 -62748198 - AluSg SINE Alu -4 306 1 297 155 0 0 chr20 9408451 9408509 -62745373 + A-rich Low_complexity Low_complexity 3 60 0 393 22 0 0 chr20 9409147 9409193 -62744689 + (CA)n Simple_repeat Simple_repeat 1 46 0 210 348 22 0 chr20 9410622 9410714 -62743168 + CT-rich Low_complexity Low_complexity 2 95 0 1079 218 84 14 chr20 9410905 9411189 -62742693 + MER2 DNA MER2_type 41 344 -1 873 271 166 56 chr20 9411274 9411810 -62742072 + MLT1H1 LTR MaLR 1 555 0 23 0 0 0 chr20 9411894 9411917 -62741965 + AT_rich Low_complexity Low_complexity 1 23 0 1045 179 0 0 chr20 9411997 9412170 -62741712 - FRAM SINE Alu 0 176 4 7471 31 2 0 chr20 9412514 9413856 -62740026 - L1PA4 LINE L1 -1 6154 4808 185 0 40 0 chr20 9414040 9414065 -62739817 + (TA)n Simple_repeat Simple_repeat 1 26 0 2156 108 0 10 chr20 9414067 9414391 -62739491 - AluSc SINE Alu 0 321 1 392 245 82 0 chr20 9416317 9416415 -62737467 - MER5A DNA MER1_type -80 109 4 526 159 58 43 chr20 9416496 9416634 -62737248 + MER53 DNA DNA 50 189 0 375 287 57 8 chr20 9416651 9416773 -62737109 - MER5B DNA MER1_type -50 128 1 207 275 211 37 chr20 9416785 9416894 -62736988 - MIR SINE MIR -61 147 20 738 193 14 21 chr20 9417131 9417271 -62736611 - MER5B DNA MER1_type -39 139 1 24 53 0 0 chr20 9417585 9417623 -62736259 + AT_rich Low_complexity Low_complexity 1 38 0 517 178 5 140 chr20 9418947 9419132 -62734750 + MER53 DNA DNA 3 157 -32 1121 195 30 128 chr20 9419132 9419537 -62734345 - MLT1A1 LTR MaLR 0 365 1 517 178 5 140 chr20 9419537 9419565 -62734317 + MER53 DNA DNA 157 187 -2 2896 144 43 14 chr20 9420088 9420649 -62733233 - L1MA4 LINE L1 -1 6299 5723 229 296 12 0 chr20 9421673 9421754 -62732128 + (TA)n Simple_repeat Simple_repeat 1 82 0 180 0 0 0 chr20 9424594 9424614 -62729268 + (TTG)n Simple_repeat Simple_repeat 2 21 0 525 279 23 17 chr20 9424938 9425110 -62728772 - MER69 DNA AcHobo -1053 173 1 2323 109 0 0 chr20 9425143 9425445 -62728437 - AluSg SINE Alu -8 302 1 479 157 39 10 chr20 9426288 9426390 -62727492 - L1MC1 LINE L1 -5 6328 6224 237 139 0 0 chr20 9427037 9427080 -62726802 + (TG)n Simple_repeat Simple_repeat 2 44 0 8256 51 0 2 chr20 9427930 9429741 -62724141 + L1PA5 LINE L1 4343 6151 -3 499 353 134 35 chr20 9429878 9430595 -62723287 - L2 LINE L2 -337 2977 2190 322 250 28 94 chr20 9431427 9431607 -62722275 + L2 LINE L2 3146 3313 0 1917 145 10 3 chr20 9432171 9432467 -62721415 - AluSx SINE Alu -14 298 1 1219 175 47 132 chr20 9433086 9433550 -62720332 - L1MB8 LINE L1 -1 6177 5753 288 338 25 55 chr20 9434415 9434616 -62719266 + L2 LINE L2 2888 3082 -190 719 230 67 11 chr20 9434889 9435067 -62718815 + MER5A DNA MER1_type 1 188 -1 652 185 8 23 chr20 9435163 9435293 -62718589 - L1MC4a LINE L1 -1052 6756 6629 258 32 0 0 chr20 9435300 9435331 -62718551 + (TG)n Simple_repeat Simple_repeat 1 31 0 1252 179 60 13 chr20 9435403 9435637 -62718245 - AluJb SINE Alu -67 245 1 747 231 29 29 chr20 9435642 9435850 -62718032 - L1MC3 LINE L1 -1260 6525 6318 343 240 20 113 chr20 9437079 9437229 -62716653 - MER5A DNA MER1_type -18 171 36 234 128 0 0 chr20 9438378 9438417 -62715465 + (TG)n Simple_repeat Simple_repeat 2 40 0 596 210 123 65 chr20 9439077 9439286 -62714596 - MIR SINE MIR 0 262 40 285 98 0 0 chr20 9439381 9439422 -62714460 + (TCTA)n Simple_repeat Simple_repeat 3 43 0 471 87 0 0 chr20 9439423 9439492 -62714390 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 186 43 0 0 chr20 9439498 9439521 -62714361 + (CCTA)n Simple_repeat Simple_repeat 1 23 0 10853 165 59 87 chr20 9439523 9442330 -62711552 - Tigger4(Zombi) DNA MER2_type -2 2729 2 1866 167 24 12 chr20 9442417 9442746 -62711136 - MER1B DNA MER1_type 0 339 7 819 158 5 49 chr20 9442782 9442966 -62710916 + L1MA5A LINE L1 6120 6295 -2 946 187 130 23 chr20 9443495 9443771 -62710111 - MER33 DNA MER1_type -25 299 1 200 225 0 0 chr20 9444504 9444544 -62709338 + CT-rich Low_complexity Low_complexity 2 41 0 1927 202 11 0 chr20 9444813 9445174 -62708708 + MLT1A1 LTR MaLR 1 365 0 2815 3 0 0 chr20 9445290 9445594 -62708288 - AluYa5 SINE Alu -7 304 1 320 236 47 123 chr20 9445624 9445836 -62708046 - L1MC4 LINE L1 -11 8031 7836 398 206 328 0 chr20 9445901 9446032 -62707850 - L1ME2 LINE L1 -75 6089 5916 6293 79 14 2 chr20 9447566 9448964 -62704918 - L1PA10 LINE L1 -5 6163 4770 6847 215 53 24 chr20 9449338 9450672 -62703210 - L1MB3 LINE L1 -7 6176 4882 5436 11 0 0 chr20 9450672 9451285 -62702597 - L1PA2 LINE L1 0 6155 5543 6847 215 53 24 chr20 9451285 9452771 -62701111 - L1MB3 LINE L1 -1301 4882 3273 505 192 113 7 chr20 9454959 9455110 -62698772 + MER53 DNA DNA 19 185 -4 202 291 36 82 chr20 9455116 9455226 -62698656 - MER5B DNA MER1_type -72 106 2 189 214 0 0 chr20 9455249 9455291 -62698591 + (CA)n Simple_repeat Simple_repeat 2 43 0 208 302 188 0 chr20 9455703 9455799 -62698083 - L2 LINE L2 -1 3312 3199 210 118 0 0 chr20 9455924 9455958 -62697924 + (A)n Simple_repeat Simple_repeat 1 34 0 558 234 185 17 chr20 9457052 9457282 -62696600 - MIR SINE MIR 0 262 16 775 235 34 0 chr20 9458160 9458339 -62695543 - MER5A DNA MER1_type -4 185 1 3267 166 75 19 chr20 9458729 9459397 -62694485 + MER44D DNA MER2_type 1 705 0 23 0 0 0 chr20 9459574 9459597 -62694285 + AT_rich Low_complexity Low_complexity 1 23 0 1759 191 29 9 chr20 9459716 9460056 -62693826 + MER7A DNA MER2_type 2 346 0 35 63 0 0 chr20 9460107 9460170 -62693712 + AT_rich Low_complexity Low_complexity 1 63 0 1279 201 44 91 chr20 9460817 9461226 -62692656 - MLT1B LTR MaLR 0 390 1 306 357 11 10 chr20 9461364 9461531 -62692351 + MIR SINE MIR 6 174 -63 737 258 128 47 chr20 9461625 9462117 -62691765 - L1MC4a LINE L1 -1644 6164 5633 348 283 26 35 chr20 9462577 9462805 -62691077 + CT-rich Low_complexity Low_complexity 1 225 0 266 307 23 11 chr20 9465023 9465111 -62688771 + MIR3 SINE MIR 109 197 -11 231 248 0 28 chr20 9465582 9465691 -62688191 + (TA)n Simple_repeat Simple_repeat 1 106 0 1564 70 0 0 chr20 9466131 9466331 -62687551 - L1PA8 LINE L1 -425 5706 5507 3114 122 0 0 chr20 9466331 9466795 -62687087 + L1PA8 LINE L1 5705 6172 0 1638 199 27 0 chr20 9467271 9467572 -62686310 + AluJb SINE Alu 1 309 -3 207 0 0 0 chr20 9467922 9467945 -62685937 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 393 252 14 119 chr20 9468484 9468702 -62685180 - L1ME1 LINE L1 -81 6085 5891 * 1154 249 84 12 chr20 9468699 9469117 -62684765 - L1MEc LINE L1 -4273 2123 1676 3081 269 40 26 chr20 9469285 9470457 -62683425 - L1ME1 LINE L1 -1450 4696 3508 340 266 1 2 chr20 9470488 9470601 -62683281 + L1M3 LINE L1 5331 5442 -726 * 16763 109 11 26 chr20 9470590 9472573 -62681309 + L1P3 LINE L1 666 2621 -3840 193 29 59 0 chr20 9472573 9472607 -62681275 + (CAA)n Simple_repeat Simple_repeat 1 36 0 16763 109 11 26 chr20 9472607 9473684 -62680198 + L1P3 LINE L1 2621 3713 -2748 628 133 0 20 chr20 9473684 9473782 -62680100 + AluSg/x SINE Alu 198 293 -16 2911 177 0 18 chr20 9473783 9474342 -62679540 + L1P3 LINE L1 4222 4770 -1691 414 311 8 0 chr20 9474348 9474467 -62679415 - L2 LINE L2 -474 2840 2721 1714 190 5 60 chr20 9474533 9474917 -62678965 - MLT1A1 LTR MaLR -2 363 1 794 297 125 9 chr20 9474994 9475337 -62678545 - MLT1J2 LTR MaLR -64 386 4 244 123 15 31 chr20 9476007 9476072 -62677810 + CT-rich Low_complexity Low_complexity 4 67 0 181 307 23 11 chr20 9476107 9476195 -62677687 + MIR3 SINE MIR 113 201 -7 25 31 0 0 chr20 9476819 9476851 -62677031 + AT_rich Low_complexity Low_complexity 1 32 0 235 337 31 10 chr20 9477413 9477511 -62676371 + L2 LINE L2 2277 2376 -938 207 214 18 0 chr20 9477556 9477612 -62676270 + (CAAA)n Simple_repeat Simple_repeat 4 60 0 631 309 120 34 chr20 9477613 9478165 -62675717 + L2 LINE L2 2446 3060 -212 532 274 54 18 chr20 9478791 9478959 -62674923 - MLT1J1 LTR MaLR -264 182 9 530 125 0 19 chr20 9479147 9479251 -62674631 - L1MA4 LINE L1 -5 6295 6194 298 350 24 0 chr20 9480169 9480292 -62673590 + MIR3 SINE MIR 2 127 -81 333 281 139 50 chr20 9480297 9480535 -62673347 + L1ME LINE L1 5521 5779 -383 1523 293 52 9 chr20 9480719 9481272 -62672610 + L1ME3 LINE L1 5573 6149 -13 199 307 92 79 chr20 9482183 9482411 -62671471 + L3 LINE CR1 486 716 -861 1033 279 81 16 chr20 9482486 9482910 -62670972 - MLT1H LTR MaLR -55 494 1 719 280 5 11 chr20 9482993 9483182 -62670700 + MER63A DNA MER1_type 23 210 0 2072 122 135 23 chr20 9483254 9483639 -62670243 - MSTA LTR MaLR 0 428 1 197 298 18 0 chr20 9484705 9484762 -62669120 - L2 LINE L2 -234 3038 2981 323 333 151 33 chr20 9484894 9485291 -62668591 - L2 LINE L2 -568 2746 2303 1304 119 67 0 chr20 9485291 9485501 -62668381 + MSTB1 LTR MaLR 209 432 0 211 390 12 0 chr20 9486559 9486641 -62667241 - MIR SINE MIR -167 95 13 303 28 0 0 chr20 9486686 9486722 -62667160 + (TG)n Simple_repeat Simple_repeat 2 37 0 38 98 0 0 chr20 9486943 9487065 -62666817 + AT_rich Low_complexity Low_complexity 1 122 0 217 264 19 0 chr20 9488202 9488255 -62665627 - MIR SINE MIR -85 177 124 312 347 0 20 chr20 9488627 9488725 -62665157 + MER91A DNA MER1_type 101 196 0 408 315 51 30 chr20 9488938 9489135 -62664747 - L1ME3 LINE L1 -251 5911 5711 2010 247 77 52 chr20 9489519 9490243 -62663639 + MER21B LTR ERV1 24 765 -98 416 236 14 74 chr20 9490771 9490919 -62662963 - MER21B LTR ERV1 -111 752 614 26 50 0 0 chr20 9491171 9491211 -62662671 + AT_rich Low_complexity Low_complexity 1 40 0 711 182 19 19 chr20 9491522 9491676 -62662206 + MLT1A1 LTR MaLR 10 163 -202 1895 226 3 0 chr20 9491677 9492014 -62661868 + L1MA4A LINE L1 1015 1352 -5497 3267 163 31 8 chr20 9492015 9492621 -62661261 + L1MA4A LINE L1 4179 4798 -2050 339 25 0 0 chr20 9492621 9492661 -62661221 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1538 48 0 0 chr20 9492661 9492850 -62661032 - L1PA4 LINE L1 -18 6137 5949 3895 20 7 0 chr20 9492850 9493299 -62660583 + L1PA4 LINE L1 5445 5896 -259 * 5578 176 38 10 chr20 9493297 9495450 -62658432 + L1MA4A LINE L1 4779 7001 -4 927 214 23 14 chr20 9496240 9496455 -62657427 + MLT1A1 LTR MaLR 147 363 -2 23 33 0 0 chr20 9496549 9496579 -62657303 + AT_rich Low_complexity Low_complexity 1 30 0 682 276 118 0 chr20 9496962 9497165 -62656717 + MIR SINE MIR 33 259 -3 790 29 19 0 chr20 9497211 9497316 -62656566 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 220 324 68 14 chr20 9497554 9497628 -62656254 - L2 LINE L2 -4 3309 3232 * 232 325 74 31 chr20 9497613 9497776 -62656106 + L2 LINE L2 3125 3294 -19 253 281 32 73 chr20 9498201 9498358 -62655524 - MIR SINE MIR -64 144 41 360 0 0 0 chr20 9498518 9498558 -62655324 + (CA)n Simple_repeat Simple_repeat 2 41 0 229 264 19 0 chr20 9499570 9499623 -62654259 + CT-rich Low_complexity Low_complexity 3 56 0 398 284 29 0 chr20 9499624 9499726 -62654156 - L2 LINE L2 -5 3267 3163 1047 348 95 39 chr20 9500098 9501144 -62652738 - L2 LINE L2 -386 2928 1825 265 295 26 0 chr20 9501482 9501560 -62652322 - MLT1H LTR MaLR -16 533 454 613 299 43 29 chr20 9501665 9501946 -62651936 - MLT1H LTR MaLR -260 289 5 241 333 139 55 chr20 9501957 9502763 -62651119 - L2 LINE L2 -2058 1256 383 1460 184 35 21 chr20 9504921 9505204 -62648678 + AluJo SINE Alu 11 297 -15 532 277 143 9 chr20 9505281 9505512 -62648370 - MIR SINE MIR 0 262 1 210 180 20 0 chr20 9505583 9505633 -62648249 + T-rich Low_complexity Low_complexity 3 53 0 206 209 0 0 chr20 9505674 9505717 -62648165 + MIR SINE MIR 37 79 -129 544 320 88 50 chr20 9506857 9507395 -62646487 - L2 LINE L2 -6 3307 2755 602 286 62 0 chr20 9507402 9507580 -62646302 - MER5A DNA MER1_type 0 189 1 259 389 8 8 chr20 9507834 9507965 -62645917 + MLT1K LTR MaLR 353 483 -105 187 346 126 31 chr20 9508908 9509067 -62644815 + L2 LINE L2 3099 3272 0 370 243 178 104 chr20 9510402 9510806 -62643076 - MLT1H LTR MaLR -114 435 2 300 286 79 87 chr20 9512063 9512189 -62641693 - MIR SINE MIR -109 153 29 2168 122 73 12 chr20 9515193 9515536 -62638346 + THE1B LTR MaLR 1 364 0 11375 99 11 0 chr20 9515536 9517098 -62636784 + THE1B-int LTR MaLR 1 1580 0 2054 131 76 17 chr20 9517098 9517442 -62636440 + THE1B LTR MaLR 1 364 0 452 275 113 14 chr20 9517541 9517683 -62636199 - MER5A DNA MER1_type -12 177 22 245 228 16 145 chr20 9517812 9518005 -62635877 - MLT1H LTR MaLR 0 549 382 228 290 160 10 chr20 9518035 9518135 -62635747 - MLT1H LTR MaLR -325 224 110 181 113 0 57 chr20 9518485 9518538 -62635344 + (TTTTA)n Simple_repeat Simple_repeat 3 52 0 790 239 51 10 chr20 9519541 9519738 -62634144 - MER3 DNA MER1_type 0 209 5 242 313 0 0 chr20 9519943 9520010 -62633872 - MIR SINE MIR -19 243 177 321 26 0 0 chr20 9520150 9520188 -62633694 + (TG)n Simple_repeat Simple_repeat 2 39 0 557 224 26 0 chr20 9520983 9521099 -62632783 + MER94 DNA DNA 3 121 -13 30 0 0 0 chr20 9521415 9521445 -62632437 + AT_rich Low_complexity Low_complexity 1 30 0 1947 112 44 4 chr20 9521484 9521826 -62632056 - L1P4 LINE L1 -603 5565 5212 3621 102 11 0 chr20 9521826 9522347 -62631535 + L1PA10 LINE L1 5630 6157 -11 1682 232 93 24 chr20 9522387 9523024 -62630858 + MER20B DNA MER1_type 77 773 -10 585 235 92 7 chr20 9523042 9523195 -62630687 + MER5A DNA MER1_type 1 166 -23 222 37 0 0 chr20 9524125 9524152 -62629730 + (TG)n Simple_repeat Simple_repeat 2 28 0 2005 132 35 0 chr20 9525290 9525579 -62628303 - AluSx SINE Alu -13 299 1 294 296 224 0 chr20 9525617 9525742 -62628140 + MER5A DNA MER1_type 31 183 -6 1862 162 38 12 chr20 9525911 9526250 -62627632 - MER7A DNA MER2_type 0 346 1 1970 157 0 10 chr20 9526422 9526734 -62627148 + AluJo SINE Alu 3 311 -1 2034 280 78 28 chr20 9526827 9527620 -62626262 + L1MEc LINE L1 93 925 -5471 32 57 0 0 chr20 9527622 9527675 -62626207 + AT_rich Low_complexity Low_complexity 1 53 0 204 214 0 0 chr20 9527891 9527933 -62625949 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 323 333 14 7 chr20 9528041 9528179 -62625703 + L2 LINE L2 2915 3053 -219 242 175 0 0 chr20 9528664 9528704 -62625178 - MLT2C1 LTR ERVL -8 389 350 346 211 56 0 chr20 9528752 9528823 -62625059 + MLT2B1 LTR ERVL 57 131 -389 186 43 0 0 chr20 9528882 9528905 -62624977 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 1046 297 105 17 chr20 9528905 9529323 -62624559 - MLT2B1 LTR ERVL -65 455 1 23590 202 28 31 chr20 9529325 9529373 -62624509 - ERVL-B1 LTR ERVL -9 5755 5708 1630 117 47 112 chr20 9529373 9529550 -62624332 + THE1C LTR MaLR 1 188 -187 1559 127 0 0 chr20 9529550 9529771 -62624111 - AluSg/x SINE Alu -7 305 85 1630 117 47 112 chr20 9529771 9529994 -62623888 + THE1C LTR MaLR 188 375 0 23590 202 28 31 chr20 9529994 9531989 -62621893 - ERVL-B1 LTR ERVL -56 5708 3709 1438 225 22 32 chr20 9531989 9532358 -62621524 + MLT1A1 LTR MaLR 1 365 0 23590 202 28 31 chr20 9532358 9532700 -62621182 - ERVL-B1 LTR ERVL -2055 3709 3368 315 0 0 0 chr20 9532700 9532735 -62621147 + (CA)n Simple_repeat Simple_repeat 2 36 0 23590 202 28 31 chr20 9532735 9534186 -62619696 - ERVL-B1 LTR ERVL -2396 3368 1915 2218 190 36 5 chr20 9534186 9534602 -62619280 + MSTB1 LTR MaLR 4 432 0 23590 202 28 31 chr20 9534602 9535187 -62618695 - ERVL-B1 LTR ERVL -3849 1915 1330 3275 117 10 0 chr20 9535187 9535681 -62618201 - L1PA13 LINE L1 0 6163 5665 23590 202 28 31 chr20 9535681 9536281 -62617601 - ERVL-B1 LTR ERVL -4434 1330 744 2631 196 16 2 chr20 9536302 9536880 -62617002 + L1MA4A LINE L1 4102 4687 -1459 3806 137 9 14 chr20 9536880 9537522 -62616360 + L1MA4A LINE L1 5650 6297 -6 24 0 0 0 chr20 9537522 9537546 -62616336 + AT_rich Low_complexity Low_complexity 1 24 0 2244 246 69 13 chr20 9537546 9538172 -62615710 - ERVL-B1 LTR ERVL -5102 662 2 876 260 69 86 chr20 9538209 9538616 -62615266 - MLT2B1 LTR ERVL -120 400 1 265 310 50 20 chr20 9538624 9538724 -62615158 - L2 LINE L2 -36 3236 3134 1193 297 60 10 chr20 9538867 9539251 -62614631 - LTR16C LTR ERVL 0 491 89 216 0 0 0 chr20 9539534 9539558 -62614324 + (T)n Simple_repeat Simple_repeat 1 24 0 222 385 21 0 chr20 9539804 9539900 -62613982 + L2 LINE L2 2868 2965 -349 279 0 0 0 chr20 9539946 9539977 -62613905 + (CA)n Simple_repeat Simple_repeat 2 32 0 242 162 54 0 chr20 9540016 9540090 -62613792 + (TA)n Simple_repeat Simple_repeat 2 79 0 1814 146 34 7 chr20 9540434 9540729 -62613153 + AluJb SINE Alu 1 303 -9 207 288 85 0 chr20 9542896 9542955 -62610927 - L2 LINE L2 -17 3255 3192 183 205 0 0 chr20 9544828 9544867 -62609015 + (TG)n Simple_repeat Simple_repeat 2 40 0 1065 266 46 30 chr20 9545307 9545611 -62608271 - LTR16C LTR ERVL -1 490 182 2205 234 58 26 chr20 9546016 9546660 -62607222 - L1MC4 LINE L1 -141 7901 7238 612 250 23 0 chr20 9546674 9546850 -62607032 - L1MC4 LINE L1 -960 7082 6903 183 374 147 10 chr20 9546904 9547102 -62606780 + L3b LINE CR1 1277 1501 -82 1800 189 9 18 chr20 9549028 9549371 -62604511 + MLT1A1 LTR MaLR 26 365 0 540 294 89 97 chr20 9549373 9549835 -62604047 - MLT1H LTR MaLR -84 465 8 221 73 0 24 chr20 9550022 9550063 -62603819 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 807 254 16 0 chr20 9550226 9550419 -62603463 + MIR SINE MIR 58 253 -9 315 266 61 48 chr20 9551247 9551489 -62602393 - MLT1L LTR MaLR -197 418 110 383 327 75 64 chr20 9552520 9552878 -62601004 - L1ME LINE L1 -379 5742 5381 288 237 88 0 chr20 9552918 9553032 -62600850 - HAL1b LINE L1 -17 1331 1208 232 225 0 0 chr20 9553035 9553075 -62600807 + polypyrimidine Low_complexity Low_complexity 5 44 0 648 287 68 54 chr20 9553652 9554094 -62599788 + LTR16A1 LTR ERVL 8 455 -2 3111 30 0 0 chr20 9554642 9555008 -62598874 - L1PA3 LINE L1 -3 6152 5787 23 33 0 0 chr20 9555150 9555180 -62598702 + AT_rich Low_complexity Low_complexity 1 30 0 568 289 115 31 chr20 9555225 9555485 -62598397 + LTR33 LTR ERVL 4 285 -236 242 109 87 0 chr20 9555508 9555554 -62598328 + MLT1H LTR MaLR 132 181 -368 205 226 19 0 chr20 9555917 9555970 -62597912 + (TA)n Simple_repeat Simple_repeat 2 55 0 651 162 0 0 chr20 9555992 9556091 -62597791 - FLAM_C SINE Alu -29 114 16 409 234 72 72 chr20 9556147 9556314 -62597568 - MER58C DNA MER1_type -5 210 44 225 0 0 0 chr20 9556399 9556424 -62597458 + (A)n Simple_repeat Simple_repeat 1 25 0 1031 248 11 29 chr20 9556488 9556762 -62597120 - L1M4 LINE L1 -5880 662 394 249 327 75 0 chr20 9556899 9557006 -62596876 + L2 LINE L2 2942 3056 -257 292 266 124 54 chr20 9557077 9557408 -62596474 - HAL1 LINE L1 0 2507 2154 33 25 0 0 chr20 9557444 9557484 -62596398 + AT_rich Low_complexity Low_complexity 1 40 0 192 77 0 0 chr20 9557587 9557613 -62596269 + (T)n Simple_repeat Simple_repeat 1 26 0 835 280 75 52 chr20 9557615 9558079 -62595803 - HAL1 LINE L1 -605 1902 1428 25 31 0 0 chr20 9558122 9558154 -62595728 + AT_rich Low_complexity Low_complexity 1 32 0 418 259 74 27 chr20 9558237 9558620 -62595262 + MLT1H LTR MaLR 1 509 -33 26 0 0 0 chr20 9559408 9559434 -62594448 + AT_rich Low_complexity Low_complexity 1 26 0 2050 112 6 37 chr20 9559581 9559904 -62593978 + AluSq SINE Alu 1 313 0 22 0 0 0 chr20 9561323 9561345 -62592537 + AT_rich Low_complexity Low_complexity 1 22 0 1791 173 134 11 chr20 9562708 9563089 -62590793 + MSTA LTR MaLR 1 428 0 183 42 0 0 chr20 9563258 9563282 -62590600 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 5188 193 22 16 chr20 9563289 9565017 -62588865 - L1PA16 LINE L1 -10 6156 4413 405 0 0 0 chr20 9565017 9565062 -62588820 + (TG)n Simple_repeat Simple_repeat 2 46 0 5188 193 22 16 chr20 9565062 9565356 -62588526 - L1PA16 LINE L1 -1753 4413 4122 408 20 0 0 chr20 9565455 9565504 -62588378 + (CA)n Simple_repeat Simple_repeat 1 49 0 261 234 31 0 chr20 9565539 9565603 -62588279 + MIR SINE MIR 106 171 -91 7592 86 5 20 chr20 9565634 9566707 -62587175 - MER11C LTR ERVK -14 1057 1 211 365 19 10 chr20 9566707 9566811 -62587071 + MIR SINE MIR 158 262 0 476 348 85 49 chr20 9567312 9567950 -62585932 - L1M4 LINE L1 -753 5393 4733 421 241 80 29 chr20 9568213 9568350 -62585532 - MIR SINE MIR 0 262 119 1841 217 74 15 chr20 9570241 9570846 -62583036 - L1MD3 LINE L1 -9 7986 7204 1011 206 122 0 chr20 9571387 9571674 -62582208 + MER33 DNA MER1_type 2 323 -1 439 290 155 5 chr20 9571760 9571960 -62581922 + MIR SINE MIR 20 249 -13 231 61 0 0 chr20 9572121 9572154 -62581728 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1742 184 3 0 chr20 9572172 9572460 -62581422 - AluJo SINE Alu -23 289 1 330 331 103 36 chr20 9572586 9573081 -62580801 - L2 LINE L2 0 3313 2779 624 251 56 59 chr20 9573198 9573299 -62580583 - L2 LINE L2 -1171 2143 2043 1132 168 0 21 chr20 9573299 9573537 -62580345 + L1MA9 LINE L1 6075 6307 -5 624 251 56 59 chr20 9573537 9573722 -62580160 - L2 LINE L2 -1271 2043 1858 345 251 143 25 chr20 9574547 9574750 -62579132 - L1MC4 LINE L1 -1051 6991 6765 2120 90 28 3 chr20 9575357 9575646 -62578236 + AluSg SINE Alu 4 299 -11 1338 255 28 40 chr20 9576257 9576680 -62577202 + LTR52 LTR ERVL 1 418 -3 217 340 65 52 chr20 9577243 9577396 -62576486 - MIR3 SINE MIR -52 156 2 292 313 84 0 chr20 9578223 9578306 -62575576 + L2 LINE L2 3178 3267 -5 368 321 31 6 chr20 9578891 9579050 -62574832 + L3b LINE CR1 1279 1441 -142 624 256 6 32 chr20 9579148 9579304 -62574578 + MER5B DNA MER1_type 1 152 -26 4233 215 31 57 chr20 9579880 9579909 -62573973 - L1MD2 LINE L1 -10 6349 6321 1765 198 28 5 chr20 9579909 9580298 -62573584 - L1MB4 LINE L1 0 6180 5783 210 91 0 0 chr20 9580298 9580331 -62573551 + (TG)n Simple_repeat Simple_repeat 2 34 0 4233 215 31 57 chr20 9580331 9581621 -62572261 - L1MD2 LINE L1 -36 6323 5055 536 134 10 10 chr20 9581634 9581731 -62572151 + L1PB4 LINE L1 6057 6153 -3 31 0 0 0 chr20 9581731 9581762 -62572120 + AT_rich Low_complexity Low_complexity 1 31 0 283 201 24 120 chr20 9581769 9581934 -62571948 - L1MB4 LINE L1 -1098 5048 4891 3929 202 92 117 chr20 9581936 9583970 -62569912 + L1MCa LINE L1 20 2004 -4422 1048 246 11 8 chr20 9584054 9584318 -62569564 - MER93b LTR ERV1 0 373 109 761 69 62 0 chr20 9584327 9584457 -62569425 + (ATGTG)n Simple_repeat Simple_repeat 2 139 0 1469 213 0 7 chr20 9584459 9584746 -62569136 - AluJb SINE Alu -26 286 2 4801 252 57 15 chr20 9584761 9586766 -62567116 + L1MCa LINE L1 2153 4245 -2181 625 229 21 0 chr20 9586773 9586913 -62566969 + MLT2D LTR ERVL 1 143 -271 370 107 27 70 chr20 9586930 9587117 -62566765 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 * 468 77 89 18 chr20 9587083 9587251 -62566631 + (TA)n Simple_repeat Simple_repeat 1 180 0 23 0 0 0 chr20 9587256 9587279 -62566603 + AT_rich Low_complexity Low_complexity 1 23 0 1212 277 10 0 chr20 9587312 9587601 -62566281 - ERVL LTR ERVL -5061 703 412 207 114 0 0 chr20 9587601 9587636 -62566246 + (TA)n Simple_repeat Simple_repeat 1 35 0 280 205 24 12 chr20 9587708 9587791 -62566091 + (TA)n Simple_repeat Simple_repeat 2 85 0 22 0 0 0 chr20 9587925 9587947 -62565935 + AT_rich Low_complexity Low_complexity 1 22 0 2337 93 3 3 chr20 9589241 9589554 -62564328 - AluSq SINE Alu 0 313 1 1653 185 7 0 chr20 9589675 9589972 -62563910 - AluSx SINE Alu -13 299 1 235 44 44 22 chr20 9590168 9590213 -62563669 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 754 248 29 14 chr20 9590615 9590825 -62563057 - L1PB4 LINE L1 -3 6153 5941 264 100 0 0 chr20 9591311 9591351 -62562531 + (TG)n Simple_repeat Simple_repeat 2 41 0 470 288 70 84 chr20 9591351 9591896 -62561986 + HAL1 LINE L1 1153 1689 -818 506 322 56 31 chr20 9593658 9593978 -62559904 - L1ME LINE L1 -347 5815 5488 2415 155 23 28 chr20 9594365 9594797 -62559085 + Tigger2a DNA MER2_type 1 430 -4 28 61 0 0 chr20 9594878 9594927 -62558955 + AT_rich Low_complexity Low_complexity 1 49 0 466 358 66 9 chr20 9595634 9595860 -62558022 + MIR SINE MIR 2 240 -22 252 59 0 0 chr20 9595928 9595962 -62557920 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 56 0 0 chr20 9596188 9596224 -62557658 + AT_rich Low_complexity Low_complexity 1 36 0 2506 51 0 3 chr20 9596910 9597221 -62556661 + AluY SINE Alu 1 310 -1 2321 94 0 7 chr20 9597234 9597542 -62556340 + AluSg SINE Alu 1 306 -4 228 184 0 0 chr20 9597773 9597822 -62556060 + (TA)n Simple_repeat Simple_repeat 2 50 0 7003 177 29 17 chr20 9597899 9600281 -62553601 - L1PB2 LINE L1 0 6151 3735 11145 146 12 5 chr20 9600635 9602426 -62551456 + Tigger1 DNA MER2_type 1 1805 -613 2071 187 37 55 chr20 9602444 9602903 -62550979 + MER34B LTR ERV1 12 462 -103 630 215 8 0 chr20 9602905 9603035 -62550847 + Ricksha_b DNA DNA 2 132 -1122 4670 178 29 51 chr20 9603035 9604061 -62549821 + Ricksha_b DNA DNA 239 1242 -12 32 67 0 0 chr20 9604841 9604901 -62548981 + AT_rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr20 9605143 9605164 -62548718 + AT_rich Low_complexity Low_complexity 1 21 0 205 339 24 24 chr20 9605568 9605692 -62548190 - L2 LINE L2 -1698 1616 1493 1418 251 42 11 chr20 9607410 9607792 -62546090 + MSTD LTR MaLR 3 396 0 5551 249 107 28 chr20 9607794 9609396 -62544486 + MSTD-int LTR MaLR 2 1730 -5 1628 173 72 45 chr20 9609401 9609776 -62544106 + MSTD LTR MaLR 1 385 -11 742 306 50 50 chr20 9610348 9610433 -62543449 + MLT1K LTR MaLR 188 272 -316 2499 160 19 2 chr20 9610433 9610858 -62543024 + MSTB1 LTR MaLR 1 432 0 742 306 50 50 chr20 9610858 9611171 -62542711 + MLT1K LTR MaLR 271 586 -2 555 200 7 59 chr20 9611819 9611954 -62541928 + LTR49 LTR ERV1 468 595 0 809 179 48 0 chr20 9612064 9612209 -62541673 - FRAM SINE Alu -17 159 8 240 111 0 0 chr20 9612930 9612966 -62540916 + (T)n Simple_repeat Simple_repeat 1 36 0 216 0 0 0 chr20 9613014 9613038 -62540844 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 198 328 56 72 chr20 9613965 9614160 -62539722 + L2 LINE L2 2828 3019 -253 191 330 60 20 chr20 9614331 9614431 -62539451 + L2 LINE L2 3137 3240 -32 2265 252 64 14 chr20 9614677 9615396 -62538486 + L1ME3A LINE L1 5408 6162 -8 2002 131 18 0 chr20 9615405 9615687 -62538195 + AluSg SINE Alu 1 287 -23 19168 176 40 9 chr20 9615837 9616660 -62537222 - L1MA2 LINE L1 0 7723 6927 2087 192 29 12 chr20 9616660 9617081 -62536801 - MSTA LTR MaLR 0 428 1 19168 176 40 9 chr20 9617081 9621674 -62532208 - L1MA2 LINE L1 -796 6927 1993 2284 79 31 0 chr20 9621674 9621965 -62531917 - AluY SINE Alu -11 300 1 19168 176 40 9 chr20 9621965 9624001 -62529881 - L1MA2 LINE L1 -5730 1993 22 237 325 125 0 chr20 9624104 9624184 -62529698 - MIR SINE MIR -152 110 21 528 312 98 27 chr20 9624485 9624780 -62529102 - MLT1I LTR MaLR -22 387 72 369 335 82 14 chr20 9624899 9625192 -62528690 - L1ME LINE L1 -350 5820 5508 35 41 0 0 chr20 9625328 9625377 -62528505 + AT_rich Low_complexity Low_complexity 1 49 0 403 285 27 20 chr20 9625715 9625959 -62527923 + LTR16C LTR ERVL 92 369 -122 37 76 0 0 chr20 9626102 9626181 -62527701 + AT_rich Low_complexity Low_complexity 1 79 0 1983 104 98 14 chr20 9626454 9626800 -62527082 + THE1C LTR MaLR 1 375 0 620 306 39 0 chr20 9627723 9627903 -62525979 - MER5A DNA MER1_type -2 187 1 964 274 150 21 chr20 9629432 9629916 -62523966 - MLT1G3 LTR MaLR -33 497 3 260 178 10 30 chr20 9630958 9631059 -62522823 + (TA)n Simple_repeat Simple_repeat 2 100 0 201 121 0 0 chr20 9631206 9631239 -62522643 + (TC)n Simple_repeat Simple_repeat 2 34 0 278 203 76 63 chr20 9631499 9631578 -62522304 - MER5A DNA MER1_type -1 188 109 470 275 154 7 chr20 9631605 9631754 -62522128 + MER5A DNA MER1_type 13 183 -6 2269 108 0 0 chr20 9631995 9632290 -62521592 - AluSg SINE Alu -15 295 1 2207 131 0 0 chr20 9632867 9633179 -62520703 + AluSx SINE Alu 1 312 0 376 250 0 46 chr20 9633658 9633766 -62520116 - MER5A DNA MER1_type -83 106 4 23 33 0 0 chr20 9633888 9633918 -62519964 + AT_rich Low_complexity Low_complexity 1 30 0 204 284 122 0 chr20 9633986 9634060 -62519822 + MIR SINE MIR 67 149 -59 671 258 98 12 chr20 9634112 9634356 -62519526 + Charlie4a DNA MER1_type 7 271 -237 721 220 0 0 chr20 9634366 9634539 -62519343 + L1 LINE L1 3844 4016 -2130 21 36 0 0 chr20 9634888 9634916 -62518966 + AT_rich Low_complexity Low_complexity 1 28 0 304 364 37 23 chr20 9635232 9635449 -62518433 + MIR SINE MIR 34 253 -9 207 206 111 48 chr20 9635785 9635848 -62518034 + MIR SINE MIR 113 179 -83 21 36 0 0 chr20 9636551 9636579 -62517303 + AT_rich Low_complexity Low_complexity 1 28 0 2097 120 74 34 chr20 9637347 9637697 -62516185 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr20 9638000 9638021 -62515861 + AT_rich Low_complexity Low_complexity 1 21 0 2274 157 29 11 chr20 9638109 9638484 -62515398 + LTR39 LTR ERV1 1 382 -401 1355 207 85 124 chr20 9638484 9639212 -62514670 + LTR8A LTR ERV1 1 700 -27 32 0 0 0 chr20 9639358 9639390 -62514492 + AT_rich Low_complexity Low_complexity 1 32 0 1828 230 35 10 chr20 9639516 9639912 -62513970 + LTR39 LTR ERV1 378 783 0 208 315 54 27 chr20 9640692 9640803 -62513079 - L2 LINE L2 -1 3312 3199 21 36 0 0 chr20 9640889 9640917 -62512965 + AT_rich Low_complexity Low_complexity 1 28 0 2421 84 0 0 chr20 9641472 9641783 -62512099 - AluY SINE Alu 0 311 1 216 395 30 15 chr20 9642425 9642557 -62511325 - MIR3 SINE MIR -63 145 12 368 183 0 0 chr20 9642557 9642617 -62511265 + MER5A DNA MER1_type 1 60 -129 1951 139 14 26 chr20 9642632 9642976 -62510906 + THE1C LTR MaLR 1 340 -35 1261 92 11 22 chr20 9642977 9643162 -62510720 - AluSg/x SINE Alu -13 299 117 696 172 0 0 chr20 9643191 9643307 -62510575 - FLAM_C SINE Alu -16 117 2 229 179 0 0 chr20 9643308 9643347 -62510535 + THE1C LTR MaLR 390 428 0 1633 224 172 5 chr20 9643353 9643778 -62510104 + MLT1D LTR MaLR 6 501 -4 247 268 0 0 chr20 9643798 9643854 -62510028 + MER5A DNA MER1_type 130 185 -4 197 273 109 55 chr20 9644071 9644181 -62509701 + MIR SINE MIR 34 149 -59 750 230 25 30 chr20 9644238 9644473 -62509409 + Charlie4a DNA MER1_type 38 271 -237 6236 198 18 16 chr20 9644482 9644770 -62509112 + L1PA16 LINE L1 3843 4129 -2037 1299 161 68 65 chr20 9644770 9645078 -62508804 + AluJb SINE Alu 3 311 0 6236 198 18 16 chr20 9645078 9647119 -62506763 + L1PA16 LINE L1 4129 6164 -2 337 224 46 101 chr20 9647121 9647358 -62506524 + Charlie4a DNA MER1_type 259 482 -26 181 241 46 81 chr20 9647445 9647532 -62506350 - MIR SINE MIR -123 139 56 1619 170 35 0 chr20 9647675 9647963 -62505919 + AluJb SINE Alu 1 298 -14 356 295 25 16 chr20 9648792 9648914 -62504968 + L3b LINE CR1 1111 1233 -350 310 277 11 11 chr20 9649609 9649703 -62504179 + MLT1I LTR MaLR 71 164 -245 234 288 106 24 chr20 9650421 9650591 -62503291 - LTR33 LTR ERVL 0 521 338 485 279 32 7 chr20 9650656 9650810 -62503072 - LTR33 LTR ERVL -360 161 4 288 0 0 0 chr20 9651468 9651500 -62502382 + (GA)n Simple_repeat Simple_repeat 1 32 0 1221 198 166 32 chr20 9651568 9651972 -62501910 + LTR48 LTR ERV1 330 787 0 260 328 37 42 chr20 9652112 9652301 -62501581 + Charlie8 DNA MER1_type 57 244 -2173 1381 220 91 23 chr20 9653145 9653617 -62500265 - Charlie4a DNA MER1_type 0 508 5 1763 133 11 7 chr20 9654030 9654308 -62499574 + AluSx SINE Alu 24 302 -10 194 192 19 19 chr20 9654696 9654748 -62499134 + MIR SINE MIR 211 262 0 374 351 61 14 chr20 9655923 9656071 -62497811 - MER5A DNA MER1_type -6 183 29 1331 143 28 4 chr20 9656137 9656544 -62497338 - LTR54 LTR ERV1 0 510 8 551 291 86 34 chr20 9656556 9656848 -62497034 - L1ME3A LINE L1 -37 6133 5827 2100 109 0 0 chr20 9657826 9658100 -62495782 - AluSg SINE Alu -16 294 21 332 318 101 34 chr20 9658253 9658520 -62495362 - L2 LINE L2 -92 3221 2937 221 333 175 0 chr20 9658524 9658707 -62495175 - MIR SINE MIR -25 237 23 2122 129 0 3 chr20 9658716 9659026 -62494856 - AluSc SINE Alu 0 309 1 2233 105 7 0 chr20 9659290 9659594 -62494288 + AluY SINE Alu 1 306 -5 2857 122 5 97 chr20 9660082 9660538 -62493344 + L1PA16 LINE L1 5650 6045 -121 1842 180 71 20 chr20 9660538 9660944 -62492938 - MSTA LTR MaLR 0 428 2 2857 122 5 97 chr20 9660944 9661055 -62492827 + L1PA16 LINE L1 6045 6165 -1 22 0 0 0 chr20 9661430 9661452 -62492430 + AT_rich Low_complexity Low_complexity 1 22 0 30 45 0 0 chr20 9662426 9662470 -62491412 + AT_rich Low_complexity Low_complexity 1 44 0 436 199 81 7 chr20 9663285 9663421 -62490461 + L1MA7 LINE L1 6146 6291 0 372 335 137 57 chr20 9663700 9664139 -62489743 - L2 LINE L2 -11 3302 2829 225 200 82 64 chr20 9664647 9664757 -62489125 - L2 LINE L2 -1046 2268 2157 295 352 59 43 chr20 9664964 9665268 -62488614 + L2 LINE L2 2250 2558 -756 597 270 6 12 chr20 9665382 9665545 -62488337 - MER58B DNA MER1_type -2 339 178 506 308 158 12 chr20 9666926 9667325 -62486557 + LTR16A1 LTR ERVL 1 457 0 200 200 0 0 chr20 9667550 9667585 -62486297 + (CA)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr20 9667642 9667663 -62486219 + AT_rich Low_complexity Low_complexity 1 21 0 725 223 80 11 chr20 9669776 9669951 -62483931 + L1MB4 LINE L1 5845 6031 -149 2582 218 49 5 chr20 9670187 9670798 -62483084 - L1MB4 LINE L1 -4 6176 5539 1741 243 19 2 chr20 9670829 9671294 -62482588 - L1MB4 LINE L1 -765 5381 4909 338 342 43 27 chr20 9673316 9673500 -62480382 - MIR3 SINE MIR -4 204 18 276 257 62 9 chr20 9675294 9675407 -62478475 - LTR33 LTR ERVL -57 464 346 428 371 10 10 chr20 9675457 9675662 -62478220 - LTR33 LTR ERVL -257 264 60 291 274 71 0 chr20 9675754 9675838 -62478044 + L1ME3A LINE L1 17 106 -6434 451 96 58 0 chr20 9675845 9675949 -62477933 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 2247 272 58 58 chr20 9675949 9676994 -62476888 + L1ME3A LINE L1 105 1040 -5500 557 228 22 10 chr20 9676991 9677140 -62476742 - L1MDa LINE L1 -4604 1778 1521 * 1321 174 66 7 chr20 9677140 9677427 -62476455 - Ricksha DNA DNA -17 2837 2534 3588 149 58 35 chr20 9677433 9678213 -62475669 - Ricksha DNA DNA -384 2867 1973 2675 26 0 0 chr20 9678213 9678524 -62475358 - AluYa5 SINE Alu 0 311 1 3588 149 58 35 chr20 9678524 9678823 -62475059 - Ricksha DNA DNA -1278 1973 1682 5154 280 33 29 chr20 9679670 9679914 -62473968 + L1P LINE L1 1487 1728 -4418 2398 86 0 0 chr20 9679914 9680216 -62473666 + AluSx SINE Alu 1 302 -10 5154 280 33 29 chr20 9680216 9682042 -62471840 + L1P LINE L1 1728 3566 -2580 1283 235 0 0 chr20 9684306 9684540 -62469342 + Tigger7 DNA MER2_type 3 236 -497 1078 217 9 4 chr20 9684546 9684776 -62469106 - MER46A DNA MER2_type -1 235 5 403 195 24 0 chr20 9684778 9684860 -62469022 + Tigger7 DNA MER2_type 2407 2490 -1 325 294 105 14 chr20 9684922 9685065 -62468817 - L1MDa LINE L1 -5398 1165 1010 3256 282 92 30 chr20 9685219 9687572 -62466310 + L1ME3A LINE L1 3204 5762 -794 2110 147 26 26 chr20 9687572 9687961 -62465921 + L1PB1 LINE L1 5750 6138 -13 3256 282 92 30 chr20 9687961 9688400 -62465482 + L1ME3A LINE L1 5762 6172 -384 527 254 113 60 chr20 9688401 9688684 -62465198 + L1ME3A LINE L1 6241 6538 -26 31 92 0 0 chr20 9688806 9688893 -62464989 + AT_rich Low_complexity Low_complexity 1 87 0 1524 197 0 16 chr20 9688897 9689202 -62464680 + AluJo SINE Alu 1 300 -12 484 296 49 128 chr20 9689418 9689694 -62464188 - L2 LINE L2 -452 2862 2566 338 182 39 0 chr20 9689694 9689771 -62464111 + L1MB3 LINE L1 6091 6170 -13 484 296 49 128 chr20 9689771 9690142 -62463740 - L2 LINE L2 -748 2566 2266 437 297 121 25 chr20 9690158 9690397 -62463485 - MIR SINE MIR 0 262 1 1785 166 0 10 chr20 9690870 9691172 -62462710 + AluJb SINE Alu 1 299 -13 13784 191 31 18 chr20 9691530 9694152 -62459730 + L1MA3 LINE L1 16 2602 -5122 2215 118 0 0 chr20 9694152 9694457 -62459425 + AluSx SINE Alu 1 305 -7 13784 191 31 18 chr20 9694457 9697145 -62456737 + L1MA3 LINE L1 2602 5786 -1938 503 123 0 12 chr20 9697145 9697226 -62456656 - MADE1 DNA Mariner 0 80 1 13784 191 31 18 chr20 9697226 9699190 -62454692 + L1MA3 LINE L1 5786 7723 -1 739 342 70 23 chr20 9699491 9699889 -62453993 - LTR16C LTR ERVL -4 487 71 1960 239 105 2 chr20 9700640 9701125 -62452757 - MER21B LTR ERV1 -113 750 216 1265 226 30 15 chr20 9701130 9701400 -62452482 + MSTD LTR MaLR 123 396 0 875 207 57 0 chr20 9701400 9701593 -62452289 - L1 LINE L1 -900 5246 5043 * 3901 178 20 24 chr20 9701592 9702372 -62451510 + L1MB1 LINE L1 5392 6168 0 246 329 49 0 chr20 9703356 9703438 -62450444 + L2 LINE L2 2413 2498 -816 346 241 0 0 chr20 9703714 9703793 -62450089 - L1ME4a LINE L1 -296 5825 5747 858 230 158 34 chr20 9704125 9704447 -62449435 - MLT1A1 LTR MaLR 0 365 4 3137 187 20 6 chr20 9704684 9705320 -62448562 - L1MC1 LINE L1 0 6333 5689 248 241 89 0 chr20 9705320 9705399 -62448483 - L1 LINE L1 -1846 4300 4215 291 165 41 10 chr20 9705404 9705501 -62448381 - L1 LINE L1 -2974 3172 3073 810 153 20 33 chr20 9705516 9705666 -62448216 - L1MC1 LINE L1 -769 5564 5417 * 6447 162 13 9 chr20 9705663 9706021 -62447861 - L1PB1 LINE L1 -3 6148 5793 192 77 0 0 chr20 9706021 9706047 -62447835 + (TA)n Simple_repeat Simple_repeat 1 26 0 6447 162 13 9 chr20 9706047 9707848 -62446034 - L1PB1 LINE L1 -358 5793 3977 364 181 13 110 chr20 9707847 9708002 -62445880 - L1 LINE L1 -3219 2927 2788 * 21 0 0 0 chr20 9708925 9708946 -62444936 + AT_rich Low_complexity Low_complexity 1 21 0 1069 249 20 23 chr20 9708971 9709324 -62444558 + L1 LINE L1 4359 4710 -1436 27 0 0 0 chr20 9709340 9709367 -62444515 + AT_rich Low_complexity Low_complexity 1 27 0 3995 182 59 39 chr20 9709367 9709618 -62444264 - L1MA4A LINE L1 -24 6981 6736 204 40 0 0 chr20 9709618 9709643 -62444239 + (TG)n Simple_repeat Simple_repeat 2 26 0 3995 182 59 39 chr20 9709643 9711119 -62442763 - L1MA4A LINE L1 -269 6736 5159 6242 215 20 9 chr20 9711119 9712633 -62441249 - L1MA4A LINE L1 -2002 4846 3315 4368 194 25 68 chr20 9712632 9713441 -62440441 - L1MA4A LINE L1 -4309 2540 1795 * 723 197 92 0 chr20 9713441 9713583 -62440299 - FRAM SINE Alu -10 156 2 4368 194 25 68 chr20 9713583 9713951 -62439931 - L1MA4A LINE L1 -5054 1795 1413 971 265 63 40 chr20 9713954 9714045 -62439837 - L1M4 LINE L1 -2332 3814 3727 2281 97 0 0 chr20 9714045 9714345 -62439537 + AluY SINE Alu 2 301 -10 971 265 63 40 chr20 9714345 9714373 -62439509 - L1M4 LINE L1 -2419 3727 3701 297 0 0 0 chr20 9714373 9714406 -62439476 + (TG)n Simple_repeat Simple_repeat 2 34 0 971 265 63 40 chr20 9714406 9714681 -62439201 - L1M4 LINE L1 -2445 3701 3410 1112 129 7 0 chr20 9714681 9714874 -62439008 - AluSg SINE Alu 0 320 127 507 222 0 0 chr20 9714877 9714994 -62438888 + (CATATA)n Simple_repeat Simple_repeat 5 121 0 1002 81 0 0 chr20 9714999 9715122 -62438760 - AluSg SINE Alu -187 123 1 2520 226 40 12 chr20 9715127 9715425 -62438457 - L1M4 LINE L1 -2727 3419 3131 2732 10 3 0 chr20 9715425 9715727 -62438155 - AluYa5 SINE Alu -8 303 1 2520 226 40 12 chr20 9715727 9716188 -62437694 - L1M4 LINE L1 -3015 3131 2639 1632 199 58 17 chr20 9716572 9716919 -62436963 + LTR22 LTR ERVK 1 361 -148 301 327 51 56 chr20 9716971 9717185 -62436697 - L2 LINE L2 -542 2772 2560 909 283 109 38 chr20 9717232 9717780 -62436102 + MLT1G1 LTR MaLR 1 587 -8 461 284 13 79 chr20 9718585 9718814 -62435068 + L2 LINE L2 3100 3313 0 286 324 36 18 chr20 9719524 9719635 -62434247 - L2 LINE L2 -17 3255 3143 259 321 138 36 chr20 9719622 9719927 -62433955 - L2 LINE L2 -702 2612 2277 * 249 295 0 41 chr20 9720032 9720154 -62433728 + GA-rich Low_complexity Low_complexity 4 120 0 219 139 0 0 chr20 9720371 9720407 -62433475 + (TG)n Simple_repeat Simple_repeat 2 37 0 345 301 35 21 chr20 9720449 9720592 -62433290 - L2 LINE L2 -1884 1430 1286 295 260 53 40 chr20 9720922 9721072 -62432810 + L1ME4a LINE L1 5782 5933 -188 1328 241 36 42 chr20 9721087 9721369 -62432513 + L1ME4a LINE L1 5493 5772 -398 2531 53 0 3 chr20 9721369 9721672 -62432210 - AluY SINE Alu -9 302 1 1328 241 36 42 chr20 9721672 9721837 -62432045 + L1ME4a LINE L1 5772 5937 -233 617 86 21 0 chr20 9721839 9721932 -62431950 + L1PB2 LINE L1 6049 6143 -8 280 247 80 7 chr20 9722075 9722225 -62431657 + L1ME4a LINE L1 5961 6121 0 28 29 0 0 chr20 9722403 9722438 -62431444 + AT_rich Low_complexity Low_complexity 1 35 0 185 386 85 7 chr20 9724147 9724300 -62429582 - MIR SINE MIR -93 169 5 1088 286 59 53 chr20 9724344 9724871 -62429011 + MLT1H1 LTR MaLR 11 540 -15 197 264 33 77 chr20 9724988 9725079 -62428803 + MIR SINE MIR 5 91 -171 216 143 43 0 chr20 9725116 9725186 -62428696 + (TA)n Simple_repeat Simple_repeat 2 74 0 1514 264 8 60 chr20 9725208 9725711 -62428171 - MLT2B1 LTR ERVL -42 478 2 928 218 76 17 chr20 9725714 9726003 -62427879 - L1MA9 LINE L1 -2436 3710 3405 * 6472 200 29 13 chr20 9725997 9727504 -62426378 + L1MA9 LINE L1 3697 5228 -918 592 116 18 0 chr20 9727512 9727624 -62426258 + L1MA9 LINE L1 5335 5448 -852 3235 153 13 10 chr20 9727624 9728218 -62425664 + L1MA4A LINE L1 5703 6299 -4 4403 138 40 51 chr20 9728237 9728941 -62424941 + L1MA9 LINE L1 5476 6171 -141 1936 189 72 12 chr20 9728941 9729343 -62424539 + MSTB LTR MaLR 1 426 0 4403 138 40 51 chr20 9729343 9729484 -62424398 + L1MA9 LINE L1 6171 6312 0 11039 183 24 27 chr20 9729485 9731645 -62422237 - ERVL-B1 LTR ERVL -3 5761 3610 * 11060 200 13 10 chr20 9731640 9733682 -62420200 - ERVL-B1 LTR ERVL -2482 3282 1235 2884 230 104 82 chr20 9733699 9734790 -62419092 - ERVL-B1 LTR ERVL -4648 1116 2 264 77 0 0 chr20 9734871 9734910 -62418972 + (TA)n Simple_repeat Simple_repeat 2 40 0 1233 253 17 111 chr20 9734916 9735482 -62418400 - MLT2B3 LTR ERVL -46 491 3 276 324 29 0 chr20 9735484 9735589 -62418293 + MIR SINE MIR 154 261 -1 297 261 84 8 chr20 9736220 9736339 -62417543 - L1ME3A LINE L1 -1 6169 6042 698 190 229 0 chr20 9736429 9736608 -62417274 + MIR SINE MIR 32 251 -11 25 0 0 0 chr20 9738519 9738544 -62415338 + AT_rich Low_complexity Low_complexity 1 25 0 205 200 43 0 chr20 9738566 9738636 -62415246 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 1851 145 0 41 chr20 9739173 9739490 -62414392 - AluJo SINE Alu 0 312 9 438 292 139 39 chr20 9740354 9740635 -62413247 - L2 LINE L2 0 3313 3005 261 309 56 24 chr20 9741112 9741238 -62412644 + MER5A DNA MER1_type 10 139 -50 * 330 341 113 24 chr20 9741210 9741517 -62412365 - L2 LINE L2 -219 3053 2726 22 35 0 0 chr20 9741986 9742015 -62411867 + AT_rich Low_complexity Low_complexity 1 29 0 657 218 41 86 chr20 9742296 9742493 -62411389 + MER20 DNA MER1_type 31 218 -1 246 320 118 62 chr20 9742734 9742912 -62410970 + MIR3 SINE MIR 16 203 -5 306 350 17 8 chr20 9742914 9743034 -62410848 + MLT2E LTR ERVL 1 121 -507 245 304 185 22 chr20 9743055 9743239 -62410643 + MLT2F LTR ERVL 223 436 -227 284 207 0 85 chr20 9743406 9743443 -62410439 + MLT2E LTR ERVL 533 561 -67 2234 160 85 5 chr20 9743443 9743867 -62410015 + LTR22A LTR ERVK 1 458 0 284 207 0 85 chr20 9743867 9743911 -62409971 + MLT2E LTR ERVL 561 607 -21 2022 149 0 0 chr20 9744031 9744326 -62409556 + AluSg SINE Alu 1 295 -15 231 265 15 0 chr20 9744679 9744747 -62409135 - MER103 DNA DNA -91 75 7 315 348 0 0 chr20 9745158 9745247 -62408635 - MIR SINE MIR -148 114 26 21 0 0 0 chr20 9745980 9746001 -62407881 + AT_rich Low_complexity Low_complexity 1 21 0 7271 42 3 10 chr20 9746001 9747057 -62406825 - L1PA4 LINE L1 -3 6152 5097 1681 189 0 16 chr20 9747658 9747964 -62405918 - AluJo SINE Alu -9 303 3 12119 184 54 24 chr20 9748141 9749822 -62404060 + L1M1 LINE L1 13 1641 -5924 315 0 0 0 chr20 9749822 9749857 -62404025 + (GA)n Simple_repeat Simple_repeat 2 36 0 12119 184 54 24 chr20 9749857 9750208 -62403674 + L1M1 LINE L1 1641 1980 -5585 640 13 0 0 chr20 9750208 9750287 -62403595 + L1PA2 LINE L1 6073 6151 -4 12119 184 54 24 chr20 9750287 9750405 -62403477 + L1M1 LINE L1 1980 2093 -5472 2127 113 10 0 chr20 9750405 9750698 -62403184 + AluSc SINE Alu 1 296 -13 12119 184 54 24 chr20 9750698 9750991 -62402891 + L1M1 LINE L1 2093 2533 -5032 2877 142 6 18 chr20 9750985 9751500 -62402382 + L1M1 LINE L1 2887 3395 -4170 * 16253 168 24 23 chr20 9751554 9752804 -62401078 + L1MA2 LINE L1 663 1910 -5813 1679 150 177 11 chr20 9752804 9753171 -62400711 + MSTA LTR MaLR 1 428 0 16253 168 24 23 chr20 9753171 9758975 -62394907 + L1MA2 LINE L1 1910 7719 -4 23 33 0 0 chr20 9758984 9759014 -62394868 + AT_rich Low_complexity Low_complexity 1 30 0 280 303 92 54 chr20 9759044 9759229 -62394653 - MLT1K LTR MaLR -172 416 225 185 257 29 71 chr20 9760394 9760464 -62393418 + L2 LINE L2 3184 3250 -63 297 274 153 0 chr20 9760553 9760677 -62393205 + MIR SINE MIR 70 212 -50 27 92 0 0 chr20 9761222 9761298 -62392584 + AT_rich Low_complexity Low_complexity 1 76 0 2545 255 88 17 chr20 9761494 9762584 -62391298 - L1MD2 LINE L1 -70 6289 5128 310 247 66 44 chr20 9762963 9763164 -62390718 - L1MD2 LINE L1 -2969 3177 2969 324 0 0 0 chr20 9763164 9763200 -62390682 + (TG)n Simple_repeat Simple_repeat 2 37 0 310 247 66 44 chr20 9763200 9763225 -62390657 - L1MD2 LINE L1 -3177 2969 2946 * 784 221 44 15 chr20 9763203 9763407 -62390475 - L1MC2 LINE L1 -8 6336 6127 941 206 31 51 chr20 9763585 9763874 -62390008 - LTR56 LTR ERV1 -1 436 179 1398 244 74 30 chr20 9763874 9764472 -62389410 + L1MC3 LINE L1 831 1454 -4972 7378 225 58 54 chr20 9764519 9767848 -62386034 + L1MC3 LINE L1 2032 5347 -2718 2030 162 0 0 chr20 9767848 9768156 -62385726 - AluSx SINE Alu -4 308 1 7378 225 58 54 chr20 9768156 9769944 -62383938 + L1MC3 LINE L1 5347 7445 -620 249 324 0 0 chr20 9769944 9770012 -62383870 + MLT1J2 LTR MaLR 35 102 -465 7378 225 58 54 chr20 9770012 9770614 -62383268 + L1MC3 LINE L1 7445 8043 -22 2774 12 3 0 chr20 9770617 9770938 -62382944 - L1PA3 LINE L1 0 6155 5834 41 87 0 0 chr20 9770962 9771066 -62382816 + AT_rich Low_complexity Low_complexity 1 104 0 476 29 159 0 chr20 9771221 9771290 -62382592 + MADE1 DNA Mariner 1 80 0 316 316 51 59 chr20 9771512 9771749 -62382133 - MIR SINE MIR -25 237 3 905 64 0 0 chr20 9772174 9772284 -62381598 + AluY SINE Alu 197 306 -5 8114 148 44 82 chr20 9772831 9774593 -62379289 - pTR5 LTR ERV1 -1 2437 743 269 246 0 25 chr20 9774785 9774884 -62378998 - L1ME LINE L1 -515 5606 5516 339 293 79 7 chr20 9774884 9775024 -62378858 + MLT1J2 LTR MaLR 1 150 -300 312 325 183 6 chr20 9775070 9775239 -62378643 + MLT1J2 LTR MaLR 207 405 -45 330 262 54 54 chr20 9775292 9775802 -62378080 - L1M2 LINE L1 -684 5486 5008 21 36 0 0 chr20 9775835 9775863 -62378019 + AT_rich Low_complexity Low_complexity 1 28 0 419 269 82 82 chr20 9775915 9776305 -62377577 - L1ME LINE L1 -1301 4845 4456 824 148 0 0 chr20 9776999 9777121 -62376761 + FRAM SINE Alu 20 141 -35 1501 232 197 7 chr20 9777343 9777887 -62375995 + MER76 LTR ERV 1 647 -41 869 256 60 75 chr20 9778706 9778746 -62375136 - LTR16A1 LTR ERVL 0 457 418 198 0 0 0 chr20 9778746 9778768 -62375114 + (TG)n Simple_repeat Simple_repeat 1 22 0 869 256 60 75 chr20 9778768 9779191 -62374691 - LTR16A1 LTR ERVL -39 418 1 492 304 173 0 chr20 9780682 9780902 -62372980 + MIR SINE MIR 5 262 0 468 127 13 0 chr20 9781372 9781451 -62372431 - MADE1 DNA Mariner 0 80 1 525 229 43 55 chr20 9781559 9781812 -62372070 + LTR37B LTR ERV1 197 446 -22 403 88 15 0 chr20 9781813 9781881 -62372001 - L1MD2 LINE L1 -3 6356 6288 1356 87 0 16 chr20 9781881 9782065 -62371817 + AluSq SINE Alu 133 313 0 1980 132 24 3 chr20 9782098 9782456 -62371426 + AluSx SINE Alu 1 364 0 4441 235 73 43 chr20 9782460 9783857 -62370025 - L1MD1 LINE L1 -53 6583 5228 1831 156 11 0 chr20 9783857 9784174 -62369708 - AluJb SINE Alu 0 320 1 4441 235 73 43 chr20 9784174 9785138 -62368744 - L1MD1 LINE L1 -1408 5228 4130 1569 209 40 0 chr20 9785138 9785440 -62368442 - 7SLRNA srpRNA srpRNA -3 317 4 4441 235 73 43 chr20 9785440 9786164 -62367718 - L1MD1 LINE L1 -2506 4130 3429 963 229 84 57 chr20 9786159 9786445 -62367437 - L1MD1 LINE L1 -3895 2645 2368 * 1706 161 23 10 chr20 9786445 9786744 -62367138 - AluSx SINE Alu -7 305 3 1597 174 0 7 chr20 9786746 9787016 -62366866 - AluJb SINE Alu -21 291 24 963 229 84 57 chr20 9787016 9787274 -62366608 - L1MD1 LINE L1 -4172 2368 2207 319 268 162 0 chr20 9787317 9787459 -62366423 + MIR SINE MIR 95 259 -3 666 293 147 39 chr20 9788024 9788413 -62365469 - LTR16A1 LTR ERVL 0 457 27 3302 124 9 50 chr20 9789475 9790093 -62363789 + MER4B LTR ERV1 1 770 -9 21 0 0 0 chr20 9792415 9792436 -62361446 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 9792478 9792499 -62361383 + AT_rich Low_complexity Low_complexity 1 21 0 2882 16 0 0 chr20 9792839 9793155 -62360727 - AluYb8 SINE Alu -2 316 1 464 320 144 36 chr20 9793431 9793658 -62360224 - L1M4 LINE L1 -2734 3412 3211 225 0 0 0 chr20 9793658 9793683 -62360199 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 464 320 144 36 chr20 9793683 9793792 -62360090 - L1M4 LINE L1 -2935 3211 3115 1786 141 19 0 chr20 9793792 9794055 -62359827 - AluSx SINE Alu -14 298 31 464 320 144 36 chr20 9794055 9794579 -62359303 - L1M4 LINE L1 -3031 3115 2458 262 143 61 0 chr20 9795478 9795527 -62358355 + MADE1 DNA Mariner 1 52 -28 364 231 90 60 chr20 9795804 9795938 -62357944 - L2 LINE L2 0 3313 3176 337 250 0 0 chr20 9795989 9796057 -62357825 + L2 LINE L2 3241 3308 -5 825 218 55 56 chr20 9797163 9797546 -62356336 - MLT1C LTR MaLR -4 463 1 200 287 18 6 chr20 9797962 9798126 -62355756 + (TTAGGG)n Simple_repeat Simple_repeat 4 169 0 227 200 109 0 chr20 9798262 9798317 -62355565 + MIR SINE MIR 84 144 -64 4007 190 140 15 chr20 9798323 9799748 -62354134 - MER52A LTR ERV1 0 1755 1 22 0 0 0 chr20 9799931 9799953 -62353929 + AT_rich Low_complexity Low_complexity 1 22 0 2522 158 12 5 chr20 9800498 9800922 -62352960 + MSTA LTR MaLR 2 428 0 240 167 0 0 chr20 9803095 9803143 -62350739 + GA-rich Low_complexity Low_complexity 2 49 0 25 0 0 0 chr20 9803216 9803241 -62350641 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr20 9804779 9804800 -62349082 + AT_rich Low_complexity Low_complexity 1 21 0 504 266 158 13 chr20 9808043 9808201 -62345681 - MER5A DNA MER1_type 0 189 9 265 177 51 0 chr20 9809559 9809638 -62344244 + (CCCTAG)n Simple_repeat Simple_repeat 1 83 0 237 235 73 29 chr20 9810605 9810673 -62343209 + MIR SINE MIR 184 254 -8 265 183 0 37 chr20 9811029 9811111 -62342771 + GA-rich Low_complexity Low_complexity 3 81 0 186 43 0 0 chr20 9811937 9811960 -62341922 + (ATG)n Simple_repeat Simple_repeat 1 23 0 263 331 63 8 chr20 9811964 9812091 -62341791 - MIR SINE MIR -10 252 119 24 53 0 0 chr20 9812516 9812554 -62341328 + AT_rich Low_complexity Low_complexity 1 38 0 298 247 14 0 chr20 9812580 9812653 -62341229 - MIR SINE MIR -148 114 41 205 152 0 0 chr20 9812776 9812809 -62341073 + CT-rich Low_complexity Low_complexity 2 34 0 306 0 0 0 chr20 9812810 9812844 -62341038 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 33 0 0 chr20 9813019 9813049 -62340833 + AT_rich Low_complexity Low_complexity 1 30 0 183 360 105 0 chr20 9813362 9813476 -62340406 + L2 LINE L2 3137 3262 -10 7223 25 5 0 chr20 9814128 9815009 -62338873 + L1PA3 LINE L1 5301 6185 0 2345 59 0 50 chr20 9815818 9816141 -62337741 - AluY SINE Alu -4 307 1 375 271 79 62 chr20 9816156 9816333 -62337549 + MER102a DNA MER1_type 148 327 -3 207 0 0 0 chr20 9817653 9817676 -62336206 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 242 290 176 11 chr20 9817833 9818009 -62335873 + L2 LINE L2 2968 3172 -141 1160 146 0 0 chr20 9818012 9818190 -62335692 - AluSg/x SINE Alu -9 303 126 1862 128 10 20 chr20 9818191 9818352 -62335530 - AluSx SINE Alu -17 295 137 1877 117 47 3 chr20 9818352 9818650 -62335232 - AluSx SINE Alu -1 311 1 1862 128 10 20 chr20 9818650 9818786 -62335096 - AluSx SINE Alu -175 137 1 478 271 19 32 chr20 9818786 9818941 -62334941 + L2 LINE L2 3161 3313 0 191 291 0 18 chr20 9819012 9819067 -62334815 + L2 LINE L2 3258 3311 -2 22 35 0 0 chr20 9819728 9819757 -62334125 + AT_rich Low_complexity Low_complexity 1 29 0 323 262 158 79 chr20 9820560 9820724 -62333158 + MER5A DNA MER1_type 6 182 -7 726 257 101 68 chr20 9821115 9821648 -62332234 - MLT1H1 LTR MaLR -4 551 1 1970 54 0 0 chr20 9821671 9821930 -62331952 - L1P LINE L1 -4620 1526 1268 257 290 97 41 chr20 9822159 9822304 -62331578 + LTR33 LTR ERVL 1 153 -368 21 36 0 0 chr20 9822536 9822564 -62331318 + AT_rich Low_complexity Low_complexity 1 28 0 443 311 72 27 chr20 9823310 9823532 -62330350 + MIR SINE MIR 29 260 -2 254 281 61 0 chr20 9823563 9823645 -62330237 + L1ME LINE L1 5738 5824 -297 1409 137 194 0 chr20 9823776 9824024 -62329858 - AluSx SINE Alu -16 296 1 297 342 37 71 chr20 9824229 9824583 -62329299 + MLT1J2 LTR MaLR 104 445 -5 39 22 0 0 chr20 9824813 9824859 -62329023 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr20 9825345 9825367 -62328515 + AT_rich Low_complexity Low_complexity 1 22 0 958 358 13 22 chr20 9826267 9827037 -62326845 + L1MEc LINE L1 196 958 -5605 354 262 84 63 chr20 9827063 9827254 -62326628 + L1MEc LINE L1 785 979 -5405 428 275 46 38 chr20 9827316 9827578 -62326304 + L1MEc LINE L1 1158 1421 -5142 2083 234 75 0 chr20 9827578 9828043 -62325839 - MLT1D LTR MaLR 0 505 6 1364 266 68 70 chr20 9828047 9828116 -62325766 + L1MEc LINE L1 1265 1333 -5049 1466 191 10 27 chr20 9828116 9828414 -62325468 - AluJo SINE Alu -19 293 1 1364 266 68 70 chr20 9828414 9828953 -62324929 + L1MEc LINE L1 1333 1872 -4510 180 0 0 0 chr20 9828953 9828973 -62324909 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1364 266 68 70 chr20 9828973 9829025 -62324857 + L1MEc LINE L1 1872 1923 -4459 964 251 18 0 chr20 9829025 9829244 -62324638 + MER58A DNA MER1_type 1 223 -1 1364 266 68 70 chr20 9829244 9829664 -62324218 + L1MEc LINE L1 1923 2342 -4040 1899 65 8 0 chr20 9829664 9829910 -62323972 + L1PA5 LINE L1 5904 6151 -3 1364 266 68 70 chr20 9829910 9830462 -62323420 + L1MEc LINE L1 2342 3027 -3355 22 0 0 0 chr20 9830617 9830639 -62323243 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr20 9830694 9830720 -62323162 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 261 0 0 0 chr20 9831003 9831032 -62322850 + (TG)n Simple_repeat Simple_repeat 2 30 0 195 100 0 0 chr20 9831183 9831213 -62322669 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1930 150 3 28 chr20 9831633 9831953 -62321929 - AluJo SINE Alu 0 312 1 781 255 85 5 chr20 9832039 9832239 -62321643 + MIR SINE MIR 42 257 -5 29 94 0 0 chr20 9833511 9833596 -62320286 + AT_rich Low_complexity Low_complexity 1 85 0 3557 162 12 65 chr20 9834261 9834990 -62318892 + LTR8 LTR ERV1 1 691 0 26 64 0 0 chr20 9836212 9836259 -62317623 + AT_rich Low_complexity Low_complexity 1 47 0 270 382 18 0 chr20 9837636 9837746 -62316136 - MIR3 SINE MIR -52 156 45 319 284 104 22 chr20 9837893 9838027 -62315855 + MSTD LTR MaLR 4 148 -217 2145 168 0 0 chr20 9838092 9838449 -62315433 - L1PB4 LINE L1 -17 6139 5783 330 161 16 0 chr20 9838454 9838516 -62315366 + L1MC4 LINE L1 6641 6703 -1339 3892 154 18 7 chr20 9838524 9839720 -62314162 - L1PB4 LINE L1 -374 5782 4572 993 180 35 0 chr20 9839723 9839895 -62313987 + MSTD LTR MaLR 219 396 0 5854 234 124 26 chr20 9839896 9841475 -62312407 + MSTD-int LTR MaLR 2 1735 0 1014 166 105 33 chr20 9841475 9841796 -62312086 + MSTD LTR MaLR 1 396 0 2633 156 12 0 chr20 9841950 9842373 -62311509 + MSTA LTR MaLR 1 428 0 226 26 79 0 chr20 9843179 9843217 -62310665 + A-rich Low_complexity Low_complexity 4 44 0 385 337 120 4 chr20 9843237 9843306 -62310576 - LTR33A LTR ERVL -94 429 369 3568 122 12 81 chr20 9843306 9843988 -62309894 + MER41B LTR ERV1 1 635 0 385 337 120 4 chr20 9843988 9844185 -62309697 - LTR33A LTR ERVL -154 369 132 764 297 115 60 chr20 9844257 9844806 -62309076 - MLT1G LTR MaLR -2 588 10 376 169 0 0 chr20 9848504 9848569 -62305313 - MER81 DNA DNA -48 66 2 182 218 0 18 chr20 9848675 9848730 -62305152 + CT-rich Low_complexity Low_complexity 2 55 0 309 320 63 26 chr20 9849027 9849188 -62304694 - MIR SINE MIR -56 206 40 1300 183 23 115 chr20 9849754 9850153 -62303729 + MLT1A1 LTR MaLR 4 365 0 304 316 52 19 chr20 9850629 9850784 -62303098 - MIR SINE MIR 0 262 103 194 167 67 100 chr20 9851843 9851903 -62301979 - L2 LINE L2 -85 3228 3171 1527 217 73 11 chr20 9852035 9852473 -62301409 + Charlie4a DNA MER1_type 44 508 0 183 262 24 48 chr20 9852534 9852618 -62301264 - L2 LINE L2 -270 3002 2921 4094 36 4 2 chr20 9852708 9853203 -62300679 + L1PA4 LINE L1 5657 6152 -3 192 97 0 0 chr20 9853206 9853237 -62300645 + (A)n Simple_repeat Simple_repeat 1 31 0 416 19 19 0 chr20 9854093 9854146 -62299736 + (TC)n Simple_repeat Simple_repeat 1 54 0 342 0 0 0 chr20 9854145 9854183 -62299699 + (CA)n Simple_repeat Simple_repeat 1 38 0 * 3020 171 20 12 chr20 9856138 9856729 -62297153 - L1MA8 LINE L1 0 6291 5696 193 85 0 43 chr20 9856731 9856778 -62297104 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1800 160 10 0 chr20 9856800 9857003 -62296879 - L1MA8 LINE L1 -599 5692 5483 971 164 273 17 chr20 9857003 9857241 -62296641 - AluJb SINE Alu -3 299 1 1800 160 10 0 chr20 9857241 9857350 -62296532 - L1MA8 LINE L1 -808 5483 5377 1699 170 0 32 chr20 9857619 9857931 -62295951 + AluJb SINE Alu 11 312 0 316 396 6 59 chr20 9858434 9858877 -62295005 - L2 LINE L2 -47 3225 2817 916 238 116 62 chr20 9858890 9859260 -62294622 - LTR16C LTR ERVL 0 491 102 294 344 39 28 chr20 9859469 9859649 -62294233 - MIR SINE MIR -52 210 29 2199 105 0 3 chr20 9861270 9861566 -62292316 - AluSx SINE Alu -17 295 1 237 250 73 0 chr20 9862596 9862664 -62291218 - MIR SINE MIR -70 192 120 677 286 6 11 chr20 9862694 9862872 -62291010 - MER5B DNA MER1_type -1 177 1 433 288 124 34 chr20 9863097 9863330 -62290552 - MIR SINE MIR 0 262 9 440 301 44 54 chr20 9864231 9864527 -62289355 + HAL1b LINE L1 415 707 -641 496 313 106 51 chr20 9865258 9865891 -62287991 + L1M4 LINE L1 2337 3004 -3142 31 0 0 0 chr20 9865891 9865922 -62287960 + AT_rich Low_complexity Low_complexity 1 31 0 28 48 0 0 chr20 9865977 9866019 -62287863 + AT_rich Low_complexity Low_complexity 1 42 0 501 288 16 0 chr20 9866385 9866510 -62287372 + MER63A DNA MER1_type 59 185 -25 255 122 0 0 chr20 9866577 9866626 -62287256 + (GGGA)n Simple_repeat Simple_repeat 2 50 0 930 62 78 0 chr20 9867121 9867250 -62286632 - MER85 DNA T2_type 0 139 1 204 167 24 0 chr20 9867462 9867504 -62286378 + (TA)n Simple_repeat Simple_repeat 2 44 0 889 175 6 6 chr20 9868033 9868204 -62285678 - L1M2 LINE L1 -603 5709 5539 2267 98 21 3 chr20 9868204 9868530 -62285352 + L1MB1 LINE L1 5827 6168 0 7603 28 5 0 chr20 9868896 9870003 -62283879 + L1PA3 LINE L1 5045 6155 0 602 333 99 17 chr20 9870322 9870616 -62283266 + L2 LINE L2 2559 2876 -438 346 276 73 8 chr20 9870618 9870741 -62283141 + L2 LINE L2 3182 3312 -1 216 0 0 0 chr20 9870952 9870976 -62282906 + (CA)n Simple_repeat Simple_repeat 2 25 0 309 216 17 95 chr20 9870988 9871104 -62282778 - MIR SINE MIR -66 142 36 2183 109 6 31 chr20 9872541 9872862 -62281020 - AluSq SINE Alu 0 313 1 237 234 0 0 chr20 9873280 9873327 -62280555 - AluJ/monomer SINE Alu -250 53 7 1855 31 4 0 chr20 9874019 9874245 -62279637 - L1PA4 LINE L1 -3 6152 5926 21 36 0 0 chr20 9874708 9874736 -62279146 + AT_rich Low_complexity Low_complexity 1 28 0 245 349 129 8 chr20 9875289 9875421 -62278461 + MIR SINE MIR 5 152 -110 488 302 11 39 chr20 9875423 9875605 -62278277 + MIR SINE MIR 13 189 -73 4809 297 102 13 chr20 9875881 9876516 -62277366 - L2 LINE L2 0 3313 2736 2602 42 0 3 chr20 9876516 9876823 -62277059 + AluY SINE Alu 3 308 -3 4809 297 102 13 chr20 9876823 9878437 -62275445 - L2 LINE L2 -577 2736 863 1662 252 57 51 chr20 9878443 9878990 -62274892 - MLT1H1 LTR MaLR -2 591 3 368 283 6 127 chr20 9879001 9879174 -62274708 - L2 LINE L2 -3161 153 2 28 0 0 0 chr20 9879415 9879443 -62274439 + AT_rich Low_complexity Low_complexity 1 28 0 923 283 135 15 chr20 9879791 9880389 -62273493 - L1ME3A LINE L1 -266 5973 5306 1826 277 105 50 chr20 9880452 9882450 -62271432 - L1ME3A LINE L1 -1071 5144 3038 291 276 147 55 chr20 9882463 9882898 -62270984 - L1ME3A LINE L1 -3504 2711 2237 2481 118 8 14 chr20 9882967 9883332 -62270550 - THE1B LTR MaLR 0 364 2 569 323 102 32 chr20 9883742 9884185 -62269697 + LTR67 LTR ERVL 84 557 0 2210 105 7 0 chr20 9884322 9884618 -62269264 - AluY SINE Alu -13 298 1 673 219 86 48 chr20 9884792 9885002 -62268880 - MER20 DNA MER1_type -1 218 1 354 330 37 26 chr20 9885007 9885198 -62268684 - MER117 DNA MER1_type -3 194 2 260 55 73 0 chr20 9886655 9886710 -62267172 + (TA)n Simple_repeat Simple_repeat 2 60 0 333 0 0 0 chr20 9886713 9886750 -62267132 + (CA)n Simple_repeat Simple_repeat 2 38 0 1869 146 16 13 chr20 9887262 9887571 -62266311 + AluSg SINE Alu 1 310 0 1731 255 79 98 chr20 9888382 9890275 -62263607 - L1M4 LINE L1 -2066 4080 2223 308 246 45 36 chr20 9890282 9890392 -62263490 - L1ME3A LINE L1 -4109 2287 2177 49 84 0 0 chr20 9890766 9890885 -62262997 + AT_rich Low_complexity Low_complexity 1 119 0 307 289 92 52 chr20 9890949 9890996 -62262886 + L1M4 LINE L1 3898 3942 -2204 1110 220 37 71 chr20 9890996 9891374 -62262508 - MLT1A1 LTR MaLR 0 365 1 307 289 92 52 chr20 9891374 9891631 -62262251 + L1M4 LINE L1 3942 4214 -1932 1038 170 30 20 chr20 9891909 9892109 -62261773 + MSTB LTR MaLR 225 426 0 1020 330 25 19 chr20 9892110 9892626 -62261256 - HUERS-P1 LTR ERV1 -4033 3089 2571 2040 112 47 53 chr20 9892788 9893127 -62260755 - MER1B DNA MER1_type 0 337 1 673 343 43 56 chr20 9893866 9894700 -62259182 - HUERS-P1 LTR ERV1 -5384 1738 916 1354 274 24 64 chr20 9894890 9895605 -62258277 - HUERS-P1 LTR ERV1 -5068 1608 535 312 322 59 17 chr20 9895762 9895880 -62258002 - HUERS-P1 LTR ERV1 -6116 147 25 3498 150 25 33 chr20 9895908 9896516 -62257366 - LTR26 LTR ERV1 0 603 1 1373 191 10 58 chr20 9896746 9897055 -62256827 + AluJo SINE Alu 1 294 -18 2181 16 0 0 chr20 9897382 9897632 -62256250 + L1HS LINE L1 5902 6151 -4 1718 154 54 40 chr20 9897707 9898077 -62255805 - THE1C LTR MaLR 0 375 1 494 141 31 4 chr20 9898971 9899082 -62254800 + L1MA5A LINE L1 6187 6300 0 239 150 0 0 chr20 9899404 9899444 -62254438 + L1MC5 LINE L1 7173 7212 -749 728 186 28 7 chr20 9899475 9899620 -62254262 - MER3 DNA MER1_type -55 154 7 700 219 94 81 chr20 9899626 9900083 -62253799 + L1MC5 LINE L1 7331 7793 -168 197 348 76 8 chr20 9900914 9901032 -62252850 + MIR SINE MIR 20 145 -63 43 99 0 0 chr20 9901243 9901384 -62252498 + AT_rich Low_complexity Low_complexity 1 141 0 24 0 0 0 chr20 9902615 9902639 -62251243 + AT_rich Low_complexity Low_complexity 1 24 0 552 84 0 0 chr20 9903063 9903146 -62250736 + (TC)n Simple_repeat Simple_repeat 2 84 0 826 278 48 0 chr20 9903429 9903638 -62250244 - MER58A DNA MER1_type 0 224 6 495 218 50 122 chr20 9903649 9903952 -62249930 + LTR37B LTR ERV1 114 394 -74 311 313 35 28 chr20 9905528 9905672 -62248210 + MIR SINE MIR 52 196 -66 258 238 16 16 chr20 9906142 9906205 -62247677 + LTR67 LTR ERVL 488 550 -7 2384 75 0 3 chr20 9906301 9906593 -62247289 + AluY SINE Alu 3 293 -18 343 337 12 41 chr20 9906891 9907060 -62246822 + MER5B DNA MER1_type 10 173 -5 374 344 17 28 chr20 9907984 9908164 -62245718 - MER5A DNA MER1_type -8 181 4 428 277 14 35 chr20 9908578 9908719 -62245163 - MER5B DNA MER1_type 0 178 41 272 268 242 7 chr20 9908749 9908902 -62244980 - MER5A DNA MER1_type 0 189 1 * 305 303 53 13 chr20 9908902 9909047 -62244835 + MIR SINE MIR 30 180 -82 867 202 58 0 chr20 9909281 9909454 -62244428 - MER5A DNA MER1_type -6 183 1 287 424 32 0 chr20 9909741 9909866 -62244016 - L2 LINE L2 -28 3244 3116 2693 125 38 20 chr20 9912298 9912747 -62241135 + LTR32 LTR ERVL 15 471 0 421 258 129 26 chr20 9913418 9913573 -62240309 + MER5B DNA MER1_type 2 172 -6 960 201 5 31 chr20 9913588 9913782 -62240100 - MER5A DNA MER1_type 0 189 1 1171 288 57 2 chr20 9914396 9914830 -62239052 + L1ME3 LINE L1 5638 6094 -68 285 211 87 124 chr20 9915071 9915232 -62238650 + HAL1 LINE L1 43 197 -2310 554 319 50 38 chr20 9915390 9915869 -62238013 + HAL1 LINE L1 611 1095 -1412 510 323 65 32 chr20 9916059 9916307 -62237575 + HAL1 LINE L1 1161 1416 -1091 1246 280 77 49 chr20 9916332 9917047 -62236835 + L1M4 LINE L1 15 749 -5793 200 128 0 26 chr20 9917167 9917206 -62236676 + (TAAAAA)n Simple_repeat Simple_repeat 2 39 0 191 149 0 21 chr20 9917212 9917259 -62236623 + (TTAAA)n Simple_repeat Simple_repeat 4 49 0 2322 273 110 23 chr20 9917273 9917809 -62236073 + L1M4 LINE L1 1164 1652 -4994 243 0 0 0 chr20 9917809 9917836 -62236046 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2322 273 110 23 chr20 9917836 9918723 -62235159 + L1M4 LINE L1 1652 2711 -3935 1218 294 140 12 chr20 9919499 9920013 -62233869 + MLT1G LTR MaLR 9 588 -2 262 248 69 99 chr20 9920672 9920773 -62233109 + L2 LINE L2 3199 3296 -17 775 296 136 19 chr20 9920955 9921213 -62232669 + LTR16A LTR ERVL 18 331 -119 2699 153 5 9 chr20 9921213 9921643 -62232239 - MSTC LTR MaLR 0 428 1 775 296 136 19 chr20 9921643 9921745 -62232137 + LTR16A LTR ERVL 331 420 -30 270 0 0 0 chr20 9921807 9921837 -62232045 + (CA)n Simple_repeat Simple_repeat 1 30 0 680 274 129 30 chr20 9923845 9924318 -62229564 + MLT1H LTR MaLR 28 542 0 608 200 236 71 chr20 9924771 9925051 -62228831 + MER46C DNA MER2_type 9 334 -4 1280 97 36 109 chr20 9925880 9926128 -62227754 + MER30 DNA MER1_type 1 230 0 264 233 56 33 chr20 9926262 9926352 -62227530 + LTR67 LTR ERVL 446 537 -20 390 205 90 57 chr20 9926652 9926774 -62227108 - MLT1I LTR MaLR -9 400 275 240 35 0 0 chr20 9927161 9927190 -62226692 + (CA)n Simple_repeat Simple_repeat 2 30 0 8966 111 11 2 chr20 9927587 9928839 -62225043 + THE1B-int LTR MaLR 318 1580 0 2389 100 30 46 chr20 9928839 9929209 -62224673 + THE1B LTR MaLR 1 364 0 536 255 11 100 chr20 9929254 9929525 -62224357 + L1M4 LINE L1 4501 4747 -1399 2032 217 73 26 chr20 9929543 9930524 -62223358 + L1MB5 LINE L1 4637 5646 -528 2738 136 7 7 chr20 9930524 9930952 -62222930 + MSTA LTR MaLR 1 428 0 500 149 11 0 chr20 9930953 9931040 -62222842 + MSTA-int LTR MaLR 2 89 -1562 472 127 0 0 chr20 9931040 9931111 -62222771 + MSTA LTR MaLR 358 428 0 2409 198 19 13 chr20 9931111 9931595 -62222287 + L1MB5 LINE L1 5642 6131 -43 1963 153 0 0 chr20 9931595 9931882 -62222000 - AluSx SINE Alu -21 291 5 2409 198 19 13 chr20 9931882 9931927 -62221955 + L1MB5 LINE L1 6131 6174 0 7150 235 71 33 chr20 9932347 9933520 -62220362 - L1MD1 LINE L1 -7 6235 5108 1701 151 25 7 chr20 9933520 9933805 -62220077 + AluJb SINE Alu 1 290 -22 7150 235 71 33 chr20 9933805 9934591 -62219291 - L1MD1 LINE L1 -1134 5108 4353 2058 150 0 0 chr20 9934591 9934897 -62218985 - AluSx SINE Alu -4 308 3 7150 235 71 33 chr20 9934897 9936701 -62217181 - L1MD1 LINE L1 -1889 4353 2327 1065 83 0 0 chr20 9936710 9936854 -62217028 + L1PB1 LINE L1 5641 5784 -367 396 0 0 0 chr20 9936862 9936906 -62216976 + (TA)n Simple_repeat Simple_repeat 2 45 0 668 67 19 19 chr20 9936907 9937011 -62216871 + AluY SINE Alu 208 311 0 339 191 0 0 chr20 9937127 9937195 -62216687 + (TA)n Simple_repeat Simple_repeat 1 68 0 1689 149 100 7 chr20 9937195 9937504 -62216378 + L1PB1 LINE L1 5782 6119 -32 22 0 0 0 chr20 9937510 9937532 -62216350 + AT_rich Low_complexity Low_complexity 1 22 0 2230 192 92 29 chr20 9937537 9938046 -62215836 + L1MC1 LINE L1 1881 2483 -4097 1525 60 20 0 chr20 9938046 9938247 -62215635 + L1PA4 LINE L1 5949 6153 -2 2230 192 92 29 chr20 9938247 9938406 -62215476 + L1MC1 LINE L1 2483 2631 -3949 1375 228 148 27 chr20 9938447 9938608 -62215274 + L1MC1 LINE L1 4434 4574 -1852 2350 73 7 0 chr20 9938608 9938930 -62214952 + AluY SINE Alu 1 311 0 1375 228 148 27 chr20 9938930 9939390 -62214492 + L1MC1 LINE L1 4574 5130 -1296 1968 67 0 52 chr20 9939390 9939657 -62214225 + AluY SINE Alu 36 288 -23 302 222 0 0 chr20 9939658 9939721 -62214161 + L1MC4 LINE L1 6640 6702 -1340 258 156 0 0 chr20 9939723 9939768 -62214114 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 5946 185 18 12 chr20 9939768 9941257 -62212625 + L1MC1 LINE L1 5116 6613 0 523 274 70 32 chr20 9941709 9941895 -62211987 - MIR SINE MIR 0 262 70 1272 262 78 47 chr20 9941916 9942252 -62211630 + L1MC4 LINE L1 7415 7772 -270 2100 115 14 0 chr20 9942252 9942547 -62211335 - AluSx SINE Alu -13 299 1 1272 262 78 47 chr20 9942547 9942699 -62211183 + L1MC4 LINE L1 7772 7918 -124 2088 128 6 9 chr20 9942815 9943150 -62210732 - L1PA16 LINE L1 -6 6160 5827 237 309 124 0 chr20 9945525 9945622 -62208260 - MIR SINE MIR -114 148 40 2253 85 0 0 chr20 9945627 9945931 -62207951 - AluY SINE Alu 0 304 1 38 51 0 0 chr20 9946006 9946065 -62207817 + AT_rich Low_complexity Low_complexity 1 59 0 187 359 54 0 chr20 9946330 9946422 -62207460 - MIR SINE MIR -61 147 51 1875 152 14 3 chr20 9946824 9947113 -62206769 - AluJb SINE Alu -20 292 1 338 303 241 40 chr20 9947115 9947439 -62206443 - L2 LINE L2 0 3313 2925 1566 305 62 25 chr20 9947492 9948142 -62205740 - L2 LINE L2 -453 2861 2188 331 255 114 7 chr20 9949000 9949149 -62204733 - L1ME4a LINE L1 -1 6120 5956 227 333 0 0 chr20 9949251 9949317 -62204565 - MER2 DNA MER2_type -279 66 1 773 274 161 15 chr20 9949533 9949862 -62204020 + LTR16A1 LTR ERVL 17 393 -64 * 895 303 35 21 chr20 9949858 9950148 -62203734 - MLT1H LTR MaLR -224 325 32 745 142 0 17 chr20 9950168 9950288 -62203594 + FLAM_C SINE Alu 1 118 -15 703 271 29 14 chr20 9950421 9950628 -62203254 + MIR SINE MIR 49 258 -4 360 319 136 44 chr20 9951176 9951543 -62202339 + L3b LINE CR1 1177 1577 -6 398 317 166 34 chr20 9952318 9952536 -62201346 + L3 LINE CR1 792 980 -597 1735 184 19 19 chr20 9952536 9952901 -62200981 + MLT1A1 LTR MaLR 1 365 0 398 317 166 34 chr20 9952901 9953032 -62200850 + L3 LINE CR1 980 1187 -390 207 265 59 0 chr20 9953653 9953730 -62200152 - MIR SINE MIR -73 135 55 199 191 48 0 chr20 9953719 9953761 -62200121 + L2 LINE L2 3270 3313 0 * 265 182 23 0 chr20 9953795 9953839 -62200043 + MER4E LTR ERV1 652 696 -70 303 345 35 0 chr20 9954246 9954359 -62199523 - L2 LINE L2 -290 2982 2866 3759 121 279 78 chr20 9954383 9955673 -62198209 - pTR5 LTR ERV1 0 2438 743 375 371 113 9 chr20 9955673 9956018 -62197864 - L2 LINE L2 -465 2849 2469 533 306 42 49 chr20 9956049 9956356 -62197526 + MLT1J LTR MaLR 2 306 -205 521 336 88 4 chr20 9956457 9956683 -62197199 - L2 LINE L2 -870 2444 2200 800 242 87 10 chr20 9956699 9956988 -62196894 + L1M4 LINE L1 4572 4882 -1264 532 216 28 28 chr20 9956992 9957168 -62196714 + L1M4 LINE L1 4978 5153 -993 605 121 250 8 chr20 9957169 9957343 -62196539 + L1M4 LINE L1 5230 5441 -737 500 163 10 0 chr20 9957343 9957441 -62196441 + L1MA6 LINE L1 6202 6300 0 3194 100 4 18 chr20 9957470 9957961 -62195921 - L1MA2 LINE L1 0 6304 5821 1221 102 0 0 chr20 9957972 9958138 -62195744 - L1PA7 LINE L1 -8 6146 5981 1979 201 98 19 chr20 9958138 9958610 -62195272 + LTR22 LTR ERVK 1 509 0 30811 99 8 14 chr20 9958611 9962315 -62191567 - L1PA7 LINE L1 -166 6303 2620 2281 96 0 3 chr20 9962315 9962608 -62191274 - AluY SINE Alu -8 303 12 30811 99 8 14 chr20 9962608 9964540 -62189342 - L1PA7 LINE L1 -3849 2620 679 396 234 2 3 chr20 9964538 9964651 -62189231 - L1M4 LINE L1 -726 5442 5331 * 1318 273 53 31 chr20 9964691 9965234 -62188648 + L1M4 LINE L1 3519 4073 -2073 * 3729 83 0 6 chr20 9965232 9965727 -62188155 - L1P3 LINE L1 -5130 1331 840 1851 124 0 0 chr20 9965719 9966010 -62187872 - L1M1 LINE L1 -532 5772 5482 * 3261 171 11 43 chr20 9966011 9966772 -62187110 + L1MB7 LINE L1 5428 6163 -21 2049 135 16 0 chr20 9966774 9967078 -62186804 - AluSx SINE Alu -3 309 1 748 226 42 6 chr20 9967709 9967877 -62186005 - MER5A DNA MER1_type -8 181 8 25 51 0 0 chr20 9968383 9968422 -62185460 + AT_rich Low_complexity Low_complexity 1 39 0 206 241 56 0 chr20 9968520 9968574 -62185308 + GA-rich Low_complexity Low_complexity 4 60 0 288 239 120 11 chr20 9968662 9968754 -62185128 - MER5A DNA MER1_type -77 112 11 227 289 0 0 chr20 9968984 9969036 -62184846 - L2 LINE L2 0 3272 3221 2284 72 0 27 chr20 9969339 9969631 -62184251 - AluY SINE Alu 0 311 28 22 94 0 0 chr20 9969858 9969922 -62183960 + AT_rich Low_complexity Low_complexity 1 64 0 294 324 181 14 chr20 9970152 9970362 -62183520 - L2 LINE L2 -45 3268 3024 234 105 0 0 chr20 9970368 9970406 -62183476 + (TG)n Simple_repeat Simple_repeat 1 38 0 29 0 0 0 chr20 9970410 9970439 -62183443 + AT_rich Low_complexity Low_complexity 1 29 0 1949 202 55 0 chr20 9970461 9970843 -62183039 - MLT2C2 LTR ERVL -61 403 1 187 361 204 24 chr20 9971045 9971950 -62181932 - L2 LINE L2 -1916 1398 331 29 0 0 0 chr20 9972283 9972312 -62181570 + AT_rich Low_complexity Low_complexity 1 29 0 201 196 0 0 chr20 9973156 9973207 -62180675 + (TA)n Simple_repeat Simple_repeat 2 52 0 325 174 165 41 chr20 9973930 9974051 -62179831 + L1ME4a LINE L1 5308 5443 -2599 282 157 0 20 chr20 9974184 9974235 -62179647 - L2 LINE L2 -1 3312 3263 213 132 26 0 chr20 9974203 9974241 -62179641 - MIR SINE MIR -13 249 211 * 372 220 0 11 chr20 9974557 9974648 -62179234 - MLT1I LTR MaLR 0 409 320 270 136 0 0 chr20 9974649 9974693 -62179189 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 2068 157 0 3 chr20 9974693 9974999 -62178883 - AluSx SINE Alu -7 305 1 2602 143 11 0 chr20 9975157 9975598 -62178284 + L1MA2 LINE L1 5857 6302 -2 320 285 73 95 chr20 9975808 9976261 -62177621 + L1ME4a LINE L1 5630 6072 -49 26 30 0 0 chr20 9977430 9977463 -62176419 + AT_rich Low_complexity Low_complexity 1 33 0 2352 85 0 7 chr20 9978010 9978305 -62175577 + AluY SINE Alu 10 302 -9 616 292 121 48 chr20 9979098 9979642 -62174240 + MLT1G LTR MaLR 1 584 -6 1417 332 143 38 chr20 9979693 9980786 -62173096 - L3 LINE CR1 -118 1459 252 182 256 148 57 chr20 9980992 9981168 -62172714 + L2 LINE L2 3097 3288 -25 238 232 0 61 chr20 9981438 9981520 -62172362 - LTR16C LTR ERVL -50 441 365 266 267 0 17 chr20 9982713 9982773 -62171109 + L2 LINE L2 3246 3304 -9 1759 72 0 4 chr20 9984344 9984580 -62169302 - LTR12 LTR ERV1 0 714 480 280 258 21 0 chr20 9984581 9984678 -62169204 - LTR30 LTR ERV1 -80 642 544 997 72 158 0 chr20 9984678 9984830 -62169052 - LTR12 LTR ERV1 -437 277 102 * 5705 106 31 0 chr20 9984825 9985691 -62168191 - HERV9 LTR ERV1 -7506 893 1 5538 81 94 3 chr20 9985691 9986448 -62167434 - LTR12 LTR ERV1 0 826 1 534 214 86 0 chr20 9987261 9987401 -62166481 - MER3 DNA MER1_type -57 152 1 1779 226 108 22 chr20 9987651 9988142 -62165740 - MLT1F LTR MaLR -8 534 2 608 265 24 29 chr20 9988412 9988582 -62165300 - MER5B DNA MER1_type -7 171 3 420 257 230 7 chr20 9989318 9989470 -62164412 - MER5A DNA MER1_type 0 189 4 340 365 14 14 chr20 9991084 9991232 -62162650 + MIR3 SINE MIR 33 180 -28 2520 49 0 10 chr20 9991261 9991565 -62162317 - AluY SINE Alu -10 301 1 2789 164 138 18 chr20 9994141 9994769 -62159113 + MER39 LTR ERV1 1 704 -3 2125 166 53 33 chr20 9997017 9997469 -62156413 - LTR32 LTR ERVL 0 471 11 853 274 62 19 chr20 9997675 9997919 -62155963 - L1MEc LINE L1 -6026 370 106 1981 116 0 34 chr20 9997919 9998243 -62155639 - AluSx SINE Alu 0 315 2 853 274 62 19 chr20 9998243 9998318 -62155564 - L1MEc LINE L1 -6290 106 36 416 194 143 0 chr20 9998524 9998622 -62155260 - MLT1H LTR MaLR 0 467 356 276 241 0 65 chr20 9999398 9999506 -62154376 + LTR67 LTR ERVL 457 557 0 369 0 0 0 chr20 9999773 9999814 -62154068 + (TG)n Simple_repeat Simple_repeat 1 41 0 184 239 22 0 chr20 9999888 9999934 -62153948 - MIR3 SINE MIR -50 158 112 217 333 0 26 chr20 10000817 10000931 -62152951 + GA-rich Low_complexity Low_complexity 2 112 0 250 213 16 0 chr20 10001698 10001759 -62152123 + LTR37A LTR ERV1 111 172 -254 2172 96 17 7 chr20 10001819 10002121 -62151761 + AluSq SINE Alu 1 305 -8 615 98 0 74 chr20 10002122 10002244 -62151638 + LTR37A LTR ERV1 314 426 0 207 250 0 44 chr20 10002469 10002537 -62151345 + (CATA)n Simple_repeat Simple_repeat 3 67 0 648 227 162 0 chr20 10006348 10006546 -62147336 - MLT1H LTR MaLR -206 343 114 416 289 107 93 chr20 10007271 10007409 -62146473 + MLT1J2 LTR MaLR 6 141 -309 1028 228 27 5 chr20 10007409 10007628 -62146254 + MER58A DNA MER1_type 1 224 0 416 289 107 93 chr20 10007628 10007928 -62145954 + MLT1J2 LTR MaLR 141 450 0 204 333 0 0 chr20 10008730 10008790 -62145092 + L2 LINE L2 3249 3308 -5 1763 308 76 17 chr20 10009051 10010006 -62143876 - L2 LINE L2 0 3313 2304 308 127 0 79 chr20 10011198 10011324 -62142558 + (GGAAA)n Simple_repeat Simple_repeat 5 120 0 252 307 23 0 chr20 10011328 10011416 -62142466 - MIR3 SINE MIR -34 174 85 388 238 64 89 chr20 10011515 10011750 -62142132 + L1ME LINE L1 4795 5023 -1123 2176 86 0 0 chr20 10011769 10012061 -62141821 + L1PA7 LINE L1 5859 6150 -4 517 253 12 37 chr20 10012061 10012194 -62141688 + L1ME LINE L1 5555 5685 -479 1706 183 23 0 chr20 10012194 10012495 -62141387 + AluJo SINE Alu 1 308 -4 517 253 12 37 chr20 10012495 10012523 -62141359 + L1ME LINE L1 5685 5712 -452 1480 214 7 10 chr20 10012870 10013159 -62140723 + AluJo SINE Alu 1 288 -24 299 329 19 93 chr20 10013593 10013809 -62140073 - L2 LINE L2 0 3272 3073 217 186 0 0 chr20 10014480 10014523 -62139359 - L2 LINE L2 0 3313 3271 287 250 0 13 chr20 10014872 10014959 -62138923 + L1PA16 LINE L1 4812 4897 -1249 * 4401 157 9 4 chr20 10014957 10015734 -62138148 + L1PA16 LINE L1 5284 6064 -102 371 252 78 0 chr20 10016883 10016986 -62136896 + MER81 DNA DNA 2 112 -2 27 0 0 0 chr20 10017740 10017767 -62136115 + AT_rich Low_complexity Low_complexity 1 27 0 23 68 0 0 chr20 10019226 10019270 -62134612 + AT_rich Low_complexity Low_complexity 1 44 0 342 297 31 16 chr20 10020521 10020649 -62133233 + MER94 DNA DNA 5 134 0 317 261 80 0 chr20 10021466 10021554 -62132328 + MIR3 SINE MIR 62 156 -52 2120 105 18 3 chr20 10022052 10022337 -62131545 - AluSc SINE Alu -20 289 1 262 349 138 0 chr20 10023624 10023733 -62130149 - L2 LINE L2 0 3272 3149 206 318 236 7 chr20 10023882 10024030 -62129852 - L3 LINE CR1 -401 1176 995 27 62 0 0 chr20 10024754 10024802 -62129080 + AT_rich Low_complexity Low_complexity 1 48 0 2174 124 48 20 chr20 10025796 10026150 -62127732 + THE1B LTR MaLR 1 364 0 3308 114 9 5 chr20 10026150 10026703 -62127179 + L1MA2 LINE L1 5641 6195 -109 27 0 0 0 chr20 10027445 10027472 -62126410 + AT_rich Low_complexity Low_complexity 1 27 0 829 195 100 0 chr20 10027726 10027916 -62125966 - MER3 DNA MER1_type 0 209 1 888 235 112 104 chr20 10028187 10028647 -62125235 + HAL1b LINE L1 317 772 -576 273 57 0 0 chr20 10028647 10028682 -62125200 + (TA)n Simple_repeat Simple_repeat 2 36 0 2425 81 0 0 chr20 10028682 10028979 -62124903 - AluY SINE Alu -14 297 1 2085 135 0 7 chr20 10028987 10029275 -62124607 + AluSx SINE Alu 4 289 -23 888 235 112 104 chr20 10029275 10029643 -62124239 + HAL1b LINE L1 778 1165 -183 3360 154 66 46 chr20 10029643 10030356 -62123526 - LTR8A LTR ERV1 0 727 1 888 235 112 104 chr20 10030356 10030483 -62123399 + HAL1b LINE L1 1165 1290 -58 27 49 0 0 chr20 10030560 10030601 -62123281 + AT_rich Low_complexity Low_complexity 1 41 0 199 272 112 48 chr20 10030659 10030784 -62123098 - MIR SINE MIR -82 180 48 378 263 118 7 chr20 10032024 10032176 -62121706 + Charlie8 DNA MER1_type 10 178 -2239 1063 225 131 0 chr20 10032205 10032525 -62121357 + L1ME3 LINE L1 5721 6082 -80 355 200 56 11 chr20 10032717 10032807 -62121075 + MER5A DNA MER1_type 96 189 0 23 54 0 0 chr20 10033686 10033723 -62120159 + AT_rich Low_complexity Low_complexity 1 37 0 930 263 12 16 chr20 10033883 10034134 -62119748 + MER45C DNA AcHobo 8 257 -696 788 237 163 0 chr20 10034206 10034421 -62119461 + MER45C DNA AcHobo 704 953 0 2363 269 47 30 chr20 10035805 10036832 -62117050 - L2 LINE L2 0 3313 2277 2088 116 0 0 chr20 10037767 10038042 -62115840 - AluSx SINE Alu -14 298 24 307 325 32 16 chr20 10038364 10038490 -62115392 + MLT1H LTR MaLR 130 257 -292 180 295 0 64 chr20 10039763 10039841 -62114041 - L2 LINE L2 0 3272 3200 1340 221 147 12 chr20 10040341 10040743 -62113139 + MLT1H LTR MaLR 94 549 0 459 96 96 0 chr20 10041280 10041353 -62112529 - MADE1 DNA Mariner 0 80 1 2120 130 0 0 chr20 10041793 10042105 -62111777 - AluSq SINE Alu 0 312 1 21 0 0 0 chr20 10042124 10042145 -62111737 + AT_rich Low_complexity Low_complexity 1 21 0 5714 135 9 1 chr20 10042145 10043272 -62110610 - L1PB1 LINE L1 -3 6148 5015 2057 128 3 3 chr20 10043670 10043968 -62109914 - AluSx SINE Alu -6 306 9 222 37 0 0 chr20 10044340 10044367 -62109515 + (TAGA)n Simple_repeat Simple_repeat 1 27 0 201 158 18 35 chr20 10044367 10044424 -62109458 + (TA)n Simple_repeat Simple_repeat 1 56 0 3638 130 20 74 chr20 10044774 10045504 -62108378 + LTR8 LTR ERV1 1 691 0 606 174 58 58 chr20 10045995 10046150 -62107732 - MER5B DNA MER1_type -11 167 13 2097 91 0 82 chr20 10047357 10047676 -62106206 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr20 10048041 10048063 -62105819 + AT_rich Low_complexity Low_complexity 1 22 0 704 158 0 0 chr20 10048185 10048299 -62105583 + MLT1A2 LTR MaLR 1 114 -260 554 297 162 14 chr20 10048428 10048866 -62105016 - HAL1 LINE L1 -607 1900 1398 322 267 59 55 chr20 10048933 10049188 -62104694 - HAL1 LINE L1 -1220 1287 1032 372 360 97 8 chr20 10049203 10049461 -62104421 - HAL1 LINE L1 -1424 1083 803 586 197 27 20 chr20 10050190 10050337 -62103545 + MER3 DNA MER1_type 13 160 -49 712 267 87 5 chr20 10050740 10050946 -62102936 + MIR SINE MIR 40 262 0 395 147 0 0 chr20 10051766 10051834 -62102048 + Tigger1 DNA MER2_type 1 68 -2350 926 113 7 0 chr20 10051836 10051977 -62101905 + Tigger1 DNA MER2_type 2110 2251 -167 13081 121 66 16 chr20 10051988 10054221 -62099661 + Tigger1 DNA MER2_type 74 2418 0 804 173 0 0 chr20 10055037 10055270 -62098612 + (TGG)n Simple_repeat Simple_repeat 1 233 0 746 188 0 6 chr20 10055310 10055491 -62098391 + (TGG)n Simple_repeat Simple_repeat 1 180 0 361 292 90 39 chr20 10055804 10056037 -62097845 + L2 LINE L2 2553 2797 -517 24 32 0 0 chr20 10056299 10056330 -62097552 + AT_rich Low_complexity Low_complexity 1 31 0 297 151 0 0 chr20 10056355 10056408 -62097474 + (TGAA)n Simple_repeat Simple_repeat 2 54 0 705 144 0 0 chr20 10056642 10056760 -62097122 + L1MA5A LINE L1 6177 6294 -3 262 311 19 66 chr20 10058414 10058520 -62095362 - MIR3 SINE MIR -95 113 13 984 256 29 4 chr20 10058925 10059198 -62094684 + LTR16C LTR ERVL 212 491 0 2201 99 10 7 chr20 10059699 10060001 -62093881 + AluSx SINE Alu 1 303 -9 375 23 0 0 chr20 10060952 10060996 -62092886 + (TA)n Simple_repeat Simple_repeat 2 45 0 290 211 0 0 chr20 10061590 10061642 -62092240 + MIR SINE MIR 49 100 -162 342 280 60 10 chr20 10061668 10061768 -62092114 - L2 LINE L2 -4 3309 3205 1642 209 106 5 chr20 10061981 10062369 -62091513 - MLT1D LTR MaLR -52 453 27 527 289 71 16 chr20 10062572 10062888 -62090994 - L2 LINE L2 -297 3016 2686 221 375 17 25 chr20 10065610 10065730 -62088152 - MIR3 SINE MIR -78 130 12 2185 110 0 3 chr20 10066429 10066721 -62087161 + AluSq SINE Alu 2 292 -21 1179 167 21 177 chr20 10066730 10067149 -62086733 + MLT2D LTR ERVL 1 354 -60 256 143 0 0 chr20 10067264 10067306 -62086576 + MLT2D LTR ERVL 423 464 0 21 82 0 0 chr20 10067854 10067903 -62085979 + AT_rich Low_complexity Low_complexity 1 49 0 775 164 132 19 chr20 10068061 10068220 -62085662 - MER5A DNA MER1_type -3 186 10 185 262 107 60 chr20 10068361 10068445 -62085437 - L3 LINE CR1 -9 1568 1481 2110 152 0 0 chr20 10068649 10068952 -62084930 + AluSx SINE Alu 1 303 -9 222 385 0 0 chr20 10069271 10069336 -62084546 + MER91 DNA MER1_type 132 196 0 22 0 0 0 chr20 10071462 10071484 -62082398 + AT_rich Low_complexity Low_complexity 1 22 0 3030 166 81 25 chr20 10071484 10071607 -62082275 - L1MA7 LINE L1 -1 6290 6175 1814 154 44 68 chr20 10071607 10071991 -62081891 + THE1C LTR MaLR 1 375 0 3030 166 81 25 chr20 10071991 10072534 -62081348 - L1MA7 LINE L1 -116 6175 5587 1708 129 6 79 chr20 10072530 10072724 -62081158 + L1M2 LINE L1 5141 5348 -943 * 5152 152 9 6 chr20 10072724 10073718 -62080164 + L1PA16 LINE L1 5170 6166 0 1708 129 6 79 chr20 10073718 10074003 -62079879 + L1M2 LINE L1 5348 5592 -699 585 179 28 0 chr20 10075330 10075436 -62078446 - MER5A DNA MER1_type -77 112 4 306 0 0 0 chr20 10075786 10075820 -62078062 + (TTG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr20 10075886 10075907 -62077975 + AT_rich Low_complexity Low_complexity 1 21 0 186 71 0 0 chr20 10077641 10077669 -62076213 + (TG)n Simple_repeat Simple_repeat 1 28 0 299 315 163 5 chr20 10077743 10077927 -62075955 + MIR SINE MIR 30 242 -20 23 54 0 0 chr20 10078952 10078989 -62074893 + AT_rich Low_complexity Low_complexity 1 37 0 281 283 74 66 chr20 10079445 10079642 -62074240 + MIR SINE MIR 64 261 -1 190 391 11 0 chr20 10080247 10080339 -62073543 - MIR3 SINE MIR -49 159 67 648 261 54 71 chr20 10080352 10080632 -62073250 + Charlie8 DNA MER1_type 1 275 -2142 356 0 23 0 chr20 10080646 10080690 -62073192 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 286 180 16 0 chr20 10081026 10081087 -62072795 + MER53 DNA DNA 127 188 -1 2114 103 3 3 chr20 10081179 10081461 -62072421 + AluSc SINE Alu 5 286 -23 651 294 63 18 chr20 10082070 10082356 -62071526 - LTR16C LTR ERVL 0 491 193 821 291 8 8 chr20 10082984 10083228 -62070654 + MIR SINE MIR 9 252 -10 2033 119 52 35 chr20 10083540 10083909 -62069973 + THE1C LTR MaLR 1 375 0 437 270 37 37 chr20 10084297 10084593 -62069289 - L1ME LINE L1 -335 5786 5491 357 246 9 0 chr20 10084637 10084751 -62069131 - L1P5 LINE L1 -722 5434 5320 250 242 106 0 chr20 10085649 10085715 -62068167 + MIR SINE MIR 58 130 -78 795 241 80 5 chr20 10085741 10085965 -62067917 - MIR SINE MIR -4 258 18 25 0 0 0 chr20 10086231 10086256 -62067626 + AT_rich Low_complexity Low_complexity 1 25 0 1775 249 16 18 chr20 10086440 10086954 -62066928 - L1ME1 LINE L1 -5 6161 5649 396 0 0 0 chr20 10088095 10088139 -62065743 + (TG)n Simple_repeat Simple_repeat 2 45 0 183 80 0 0 chr20 10088140 10088165 -62065717 + (CG)n Simple_repeat Simple_repeat 2 26 0 346 235 82 20 chr20 10090335 10090433 -62063449 + L2 LINE L2 3187 3290 -23 1628 232 22 56 chr20 10092644 10092865 -62061017 - L1MA9 LINE L1 -38 6274 6047 1739 110 158 14 chr20 10092865 10093156 -62060726 + MER1B DNA MER1_type 1 333 -4 1628 232 22 56 chr20 10093156 10093490 -62060392 - L1MA9 LINE L1 -265 6047 5738 2136 128 3 13 chr20 10093499 10093804 -62060078 - AluSx SINE Alu -10 302 1 566 233 129 52 chr20 10094162 10094267 -62059615 + LTR16C LTR ERVL 242 337 -154 2369 93 0 0 chr20 10094267 10094568 -62059314 - AluSc SINE Alu -8 301 1 566 233 129 52 chr20 10094568 10094694 -62059188 + LTR16C LTR ERVL 337 491 0 2050 146 83 24 chr20 10094779 10095189 -62058693 + Tigger2a DNA MER2_type 1 434 0 864 186 81 0 chr20 10096321 10096493 -62057389 + MER5A DNA MER1_type 1 186 -3 13136 222 19 12 chr20 10096544 10098065 -62055817 - L1PA16 LINE L1 0 7604 6096 210 91 0 0 chr20 10098065 10098098 -62055784 + (TTG)n Simple_repeat Simple_repeat 2 34 0 13136 222 19 12 chr20 10098098 10101776 -62052106 - L1PA16 LINE L1 -1508 6096 2355 227 265 73 0 chr20 10101795 10101863 -62052019 - LTR9B LTR ERV1 -3 641 569 2294 105 3 10 chr20 10102400 10102713 -62051169 + AluSp SINE Alu 1 311 -2 37855 73 5 9 chr20 10103161 10107791 -62046091 - L1PA5 LINE L1 -34 6120 1515 7489 87 4 3 chr20 10107791 10108759 -62045123 + LTR5 LTR ERVK 1 969 0 37855 73 5 9 chr20 10108759 10110258 -62043624 - L1PA5 LINE L1 -4639 1515 12 257 313 12 0 chr20 10110521 10110601 -62043281 + CT-rich Low_complexity Low_complexity 2 82 0 1417 202 0 46 chr20 10110622 10110924 -62042958 - AluJo SINE Alu -20 292 5 189 279 0 0 chr20 10110949 10111028 -62042854 + CT-rich Low_complexity Low_complexity 3 81 0 203 0 37 0 chr20 10111104 10111131 -62042751 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 280 299 8 0 chr20 10111971 10112088 -62041794 - L1MEd LINE L1 -5947 172 55 439 279 92 71 chr20 10112360 10112654 -62041228 + MLT1I LTR MaLR 20 319 -90 1413 139 11 73 chr20 10113408 10113682 -62040200 - AluJo SINE Alu -13 299 43 28 48 0 0 chr20 10113702 10113744 -62040138 + AT_rich Low_complexity Low_complexity 1 42 0 2367 97 0 3 chr20 10114112 10114420 -62039462 + AluSx SINE Alu 1 307 -5 25 31 0 0 chr20 10115127 10115159 -62038723 + AT_rich Low_complexity Low_complexity 1 32 0 254 258 113 70 chr20 10115238 10115424 -62038458 + MLT1J LTR MaLR 224 417 -94 2325 66 31 0 chr20 10115467 10115754 -62038128 - AluY SINE Alu -15 296 1 229 203 81 0 chr20 10115853 10115927 -62037955 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 569 143 0 0 chr20 10116217 10116301 -62037581 - AluJ/FLAM SINE Alu -228 84 1 695 165 0 0 chr20 10117090 10117199 -62036683 + FLAM_C SINE Alu 1 109 -34 2338 92 0 22 chr20 10117226 10117542 -62036340 + AluY SINE Alu 1 309 -2 28 0 0 0 chr20 10118306 10118334 -62035548 + AT_rich Low_complexity Low_complexity 1 28 0 697 155 14 40 chr20 10118566 10118714 -62035168 + LTR37A LTR ERV1 1 144 -282 400 344 26 10 chr20 10118764 10118956 -62034926 + L2 LINE L2 2423 2617 -697 845 214 0 40 chr20 10118986 10119187 -62034695 + AluJo SINE Alu 1 193 -119 1136 205 57 4 chr20 10119213 10119442 -62034440 + MLT1D LTR MaLR 261 501 -4 1763 167 44 26 chr20 10119502 10119843 -62034039 + MER7A DNA MER2_type 2 346 0 393 311 87 31 chr20 10119990 10120060 -62033822 - MER5B DNA MER1_type -6 172 107 355 279 133 6 chr20 10120060 10120104 -62033778 - MER45A DNA AcHobo -1403 178 141 1898 146 0 14 chr20 10120104 10120391 -62033491 + AluJo SINE Alu 2 284 -28 355 279 133 6 chr20 10120391 10120504 -62033378 - MER45A DNA AcHobo -1440 141 1 393 311 87 31 chr20 10120504 10120594 -62033288 - MER5B DNA MER1_type -71 107 3 1378 224 92 22 chr20 10120643 10121084 -62032798 - MER110A LTR ERV1 0 491 41 3573 173 46 10 chr20 10127144 10127857 -62026025 + L1MB7 LINE L1 5368 6106 -78 274 156 0 0 chr20 10127863 10127908 -62025974 - L1MB7 LINE L1 -71 6113 6069 245 217 38 57 chr20 10128005 10128111 -62025771 + Charlie7 DNA MER1_type 2490 2593 -19 255 254 30 37 chr20 10128602 10128736 -62025146 - Charlie7 DNA MER1_type 0 2612 2480 * 2183 233 80 9 chr20 10128734 10129271 -62024611 - MLT1G LTR MaLR -6 584 10 345 266 0 0 chr20 10130468 10130547 -62023335 + Charlie7 DNA MER1_type 25 103 -2509 264 219 29 29 chr20 10130552 10130657 -62023225 + Charlie7 DNA MER1_type 2476 2580 -32 432 353 79 5 chr20 10131062 10131252 -62022630 - MIR SINE MIR -39 223 20 217 277 62 0 chr20 10133052 10133117 -62020765 - MIR SINE MIR -12 250 182 300 200 0 0 chr20 10133338 10133403 -62020479 + (TG)n Simple_repeat Simple_repeat 2 66 0 212 359 10 19 chr20 10133963 10134066 -62019816 - L3b LINE CR1 -164 1419 1318 475 310 49 0 chr20 10134310 10134452 -62019430 + MIR SINE MIR 1 149 -113 9732 250 53 27 chr20 10134464 10140460 -62013422 + L1ME1 LINE L1 36 6183 -52 292 301 70 19 chr20 10140355 10140511 -62013371 + L1MA10 LINE L1 6238 6401 -2 * 215 319 59 25 chr20 10140515 10140634 -62013248 + MIR SINE MIR 137 259 -3 1125 234 57 95 chr20 10140976 10141399 -62012483 - LTR16C LTR ERVL 0 491 85 1171 248 95 66 chr20 10142321 10142838 -62011044 - MLT1F1 LTR MaLR 0 567 11 25 0 0 0 chr20 10143587 10143612 -62010270 + AT_rich Low_complexity Low_complexity 1 25 0 2185 116 0 0 chr20 10143810 10144104 -62009778 + AluSg SINE Alu 1 294 -16 413 221 9 71 chr20 10144262 10144375 -62009507 + L2 LINE L2 3207 3312 -1 21 0 0 0 chr20 10144424 10144445 -62009437 + AT_rich Low_complexity Low_complexity 1 21 0 295 251 105 23 chr20 10144520 10144691 -62009191 + L1ME LINE L1 4890 5074 -1072 518 279 75 47 chr20 10144971 10145290 -62008592 + L1ME LINE L1 5357 5684 -480 23 0 0 0 chr20 10145770 10145793 -62008089 + AT_rich Low_complexity Low_complexity 1 23 0 333 0 0 0 chr20 10146849 10146886 -62006996 + (TC)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr20 10147813 10147838 -62006044 + (TG)n Simple_repeat Simple_repeat 2 26 0 466 264 54 62 chr20 10149343 10149648 -62004234 + MLT1H LTR MaLR 202 626 0 36 53 0 0 chr20 10149962 10150019 -62003863 + AT_rich Low_complexity Low_complexity 1 57 0 25 65 0 0 chr20 10150079 10150125 -62003757 + AT_rich Low_complexity Low_complexity 1 46 0 218 104 104 0 chr20 10150132 10150180 -62003702 + A-rich Low_complexity Low_complexity 2 54 0 180 0 0 0 chr20 10150257 10150277 -62003605 + (TAA)n Simple_repeat Simple_repeat 2 21 0 33 85 0 0 chr20 10150301 10150383 -62003499 + AT_rich Low_complexity Low_complexity 1 82 0 774 324 88 9 chr20 10150478 10150944 -62002938 - L1ME LINE L1 -405 5765 5263 1210 246 77 31 chr20 10151033 10151534 -62002348 - MLT1E LTR MaLR -6 587 1 1828 145 20 30 chr20 10152018 10152322 -62001560 + AluSx SINE Alu 1 301 -11 255 286 84 24 chr20 10152330 10152617 -62001265 - L1ME LINE L1 -1460 4686 4383 404 310 49 27 chr20 10153870 10154054 -61999828 - MIR SINE MIR -74 188 1 25 51 0 0 chr20 10154198 10154237 -61999645 + AT_rich Low_complexity Low_complexity 1 39 0 855 287 93 35 chr20 10154714 10155373 -61998509 - L1M4 LINE L1 -1438 4708 4012 292 167 128 51 chr20 10155469 10155547 -61998335 - MER103 DNA DNA -45 121 38 855 265 22 101 chr20 10155995 10156231 -61997651 + LTR16A1 LTR ERVL 1 179 -278 207 0 0 0 chr20 10156231 10156254 -61997628 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 855 265 22 101 chr20 10156254 10156512 -61997370 + LTR16A1 LTR ERVL 179 456 -1 215 281 125 0 chr20 10157493 10157557 -61996325 + MIR SINE MIR 89 160 -102 1531 284 29 25 chr20 10158809 10159295 -61994587 - LTR16C LTR ERVL 0 491 4 231 302 174 20 chr20 10160284 10160433 -61993449 + MLT1H LTR MaLR 3 174 -375 343 285 95 6 chr20 10160541 10160699 -61993183 + MLT1H LTR MaLR 341 512 -37 23 86 0 0 chr20 10161417 10161475 -61992407 + AT_rich Low_complexity Low_complexity 1 58 0 339 202 21 64 chr20 10163862 10163956 -61989926 + L2 LINE L2 3224 3313 0 2200 248 92 20 chr20 10165322 10165367 -61988515 + L1ME3A LINE L1 5371 5411 -759 1997 130 27 0 chr20 10165367 10165668 -61988214 + AluSx SINE Alu 1 309 -3 2200 248 92 20 chr20 10165668 10166364 -61987518 + L1ME3A LINE L1 5411 6165 -5 917 290 56 72 chr20 10166550 10166801 -61987081 + L2 LINE L2 2819 3060 -253 5714 39 0 1 chr20 10166801 10167497 -61986385 + L1PA4 LINE L1 5461 6155 0 917 290 56 72 chr20 10167497 10167742 -61986140 + L2 LINE L2 3060 3307 -6 2196 80 3 3 chr20 10167957 10168269 -61985613 + L1PA8 LINE L1 5861 6172 0 1742 239 2 21 chr20 10169819 10170246 -61983636 + L1ME1 LINE L1 5734 6152 -14 3526 79 6 4 chr20 10170339 10170822 -61983060 + L1PA8 LINE L1 5688 6171 -1 302 196 6 184 chr20 10171200 10171236 -61982646 + L1MC4 LINE L1 7541 7582 -460 2063 224 83 41 chr20 10171236 10171802 -61982080 + MLT1G LTR MaLR 1 590 0 302 196 6 184 chr20 10171802 10171923 -61981959 + L1MC4 LINE L1 7582 7670 -372 457 276 120 51 chr20 10172041 10172258 -61981624 + MIR SINE MIR 21 252 -10 380 279 125 16 chr20 10173252 10173622 -61980260 - L1ME LINE L1 -496 5625 5237 2024 141 3 0 chr20 10174566 10174865 -61979017 + AluSx SINE Alu 1 300 -12 1196 251 21 12 chr20 10175176 10175503 -61978379 + LTR16A LTR ERVL 121 450 0 391 318 127 31 chr20 10175698 10176381 -61977501 - L1ME LINE L1 -1371 4775 4027 1613 108 100 4 chr20 10176715 10176965 -61976917 + AluSc SINE Alu 1 274 -35 514 274 79 32 chr20 10177475 10177507 -61976375 - L1ME LINE L1 -402 5760 5731 923 169 75 203 chr20 10177507 10178038 -61975844 - MER4C LTR ERV1 -1 464 2 514 274 79 32 chr20 10178038 10178195 -61975687 - L1ME LINE L1 -431 5731 5562 21 36 0 0 chr20 10178217 10178245 -61975637 + AT_rich Low_complexity Low_complexity 1 28 0 645 233 158 16 chr20 10179200 10179453 -61974429 - LTR50 LTR ERVL -124 671 383 253 262 0 0 chr20 10180008 10180069 -61973813 - L2 LINE L2 0 3313 3253 21 82 0 0 chr20 10180190 10180239 -61973643 + AT_rich Low_complexity Low_complexity 1 49 0 189 115 33 33 chr20 10180243 10180304 -61973578 + (TTA)n Simple_repeat Simple_repeat 2 62 0 1719 160 7 7 chr20 10180309 10180590 -61973292 - AluJo SINE Alu -30 282 2 232 186 0 68 chr20 10182181 10182240 -61971642 - L1M1 LINE L1 -766 5536 5482 231 289 96 0 chr20 10182294 10182429 -61971453 - L1M1 LINE L1 -2406 5402 5255 21 36 0 0 chr20 10183340 10183368 -61970514 + AT_rich Low_complexity Low_complexity 1 28 0 1898 115 18 4 chr20 10183484 10183784 -61970098 - AluSx SINE Alu 0 304 1 3234 217 82 21 chr20 10183910 10184886 -61968996 + L1MC4a LINE L1 6773 7807 -1 1026 216 28 5 chr20 10185638 10185851 -61968031 + MER20 DNA MER1_type 1 218 -1 25 51 0 0 chr20 10186022 10186061 -61967821 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr20 10186457 10186477 -61967405 + (T)n Simple_repeat Simple_repeat 1 20 0 2018 144 3 0 chr20 10186765 10187064 -61966818 - AluSq SINE Alu -13 300 1 537 273 0 7 chr20 10187156 10187310 -61966572 - L1MB4 LINE L1 -6 6174 6022 863 169 51 20 chr20 10187801 10187996 -61965886 - L1MB4 LINE L1 -196 5984 5784 1574 238 129 24 chr20 10187999 10188503 -61965379 + L1ME1 LINE L1 5454 6010 -156 254 239 63 42 chr20 10188519 10188661 -61965221 + L1MC5 LINE L1 7423 7567 -394 354 350 121 8 chr20 10188750 10188990 -61964892 + L3 LINE CR1 567 833 -744 337 295 40 45 chr20 10189487 10189687 -61964195 + L1MC5 LINE L1 7645 7843 -118 3342 119 52 17 chr20 10189706 10190284 -61963598 - L1MA5 LINE L1 -19 6281 5684 1300 213 91 31 chr20 10190416 10190834 -61963048 + LTR47B LTR ERVL 1 443 0 211 215 134 107 chr20 10191567 10191702 -61962180 - MIR SINE MIR -63 145 17 1196 12 47 7 chr20 10192786 10193215 -61960667 + (CATA)n Simple_repeat Simple_repeat 1 446 0 866 291 72 23 chr20 10193423 10193770 -61960112 + L1MC4a LINE L1 5481 5844 -1964 1941 138 19 19 chr20 10193790 10194102 -61959780 + AluSx SINE Alu 1 312 0 317 314 126 0 chr20 10194177 10194352 -61959530 - L1ME4a LINE L1 -112 6009 5813 207 0 0 0 chr20 10195459 10195482 -61958400 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1234 274 88 28 chr20 10196028 10196662 -61957220 + L1M4 LINE L1 3519 4190 -1956 2165 206 154 4 chr20 10196714 10197266 -61956616 - MLT1E1 LTR MaLR -19 635 1 573 266 149 56 chr20 10197286 10198077 -61955805 + L1M4 LINE L1 4266 5130 -1016 311 136 34 102 chr20 10199273 10199361 -61954521 + MLT1I LTR MaLR 344 409 0 230 308 37 0 chr20 10199392 10199499 -61954383 - L1M4 LINE L1 -1307 4839 4729 327 281 84 39 chr20 10199665 10199868 -61954014 - L1M4 LINE L1 -1669 4477 4266 249 190 86 52 chr20 10200707 10200758 -61953124 - MLT1I LTR MaLR -4 405 353 645 272 161 31 chr20 10200758 10201107 -61952775 + MLT1G LTR MaLR 2 395 -195 663 241 143 93 chr20 10201811 10202314 -61951568 - MLT1F LTR MaLR -14 528 1 2355 94 19 38 chr20 10202478 10202849 -61951033 - THE1B LTR MaLR 0 364 1 181 358 109 15 chr20 10202941 10203078 -61950804 - L2 LINE L2 -316 2997 2848 255 86 0 0 chr20 10203218 10203253 -61950629 - MADE1 DNA Mariner -45 35 1 297 200 213 0 chr20 10203276 10203356 -61950526 - MIR SINE MIR -30 232 136 281 280 54 11 chr20 10204307 10204400 -61949482 - MIR3 SINE MIR -5 203 107 329 304 72 101 chr20 10204763 10205220 -61948662 - L1M2 LINE L1 -5651 1198 755 317 342 124 42 chr20 10204950 10205468 -61948414 + L1M2 LINE L1 672 1231 -5618 * 1139 71 14 5 chr20 10206190 10206405 -61947477 + (TC)n Simple_repeat Simple_repeat 1 217 0 961 131 0 0 chr20 10208341 10208478 -61945404 - AluSg/x SINE Alu -25 287 151 180 340 0 0 chr20 10209199 10209249 -61944633 - L2 LINE L2 -1 3271 3222 335 246 164 41 chr20 10209252 10209447 -61944435 - MER20 DNA MER1_type 0 219 1 183 80 0 0 chr20 10209695 10209720 -61944162 + (A)n Simple_repeat Simple_repeat 1 25 0 229 281 44 97 chr20 10210059 10210287 -61943595 + L2 LINE L2 3098 3313 0 197 272 167 35 chr20 10210391 10210505 -61943377 - L2 LINE L2 0 3313 3185 212 220 20 0 chr20 10211535 10211585 -61942297 + (TA)n Simple_repeat Simple_repeat 1 51 0 489 182 73 0 chr20 10212401 10212529 -61941353 - MIR SINE MIR -63 145 64 301 306 14 0 chr20 10212725 10212797 -61941085 - L2 LINE L2 0 3272 3200 188 325 167 42 chr20 10213674 10213794 -61940088 + L2 LINE L2 3133 3267 -5 31 0 0 0 chr20 10214303 10214334 -61939548 + AT_rich Low_complexity Low_complexity 1 31 0 255 225 0 28 chr20 10214729 10214800 -61939082 - L1MC4 LINE L1 -138 7904 7836 558 259 112 68 chr20 10214853 10215388 -61938494 - L1MC5 LINE L1 -364 7678 7127 22 35 0 0 chr20 10216464 10216493 -61937389 + AT_rich Low_complexity Low_complexity 1 29 0 1197 267 112 44 chr20 10216662 10217453 -61936429 - L2 LINE L2 -5 3308 2458 2235 105 0 25 chr20 10217651 10217966 -61935916 + AluSq SINE Alu 1 307 -6 3951 123 34 65 chr20 10218464 10219263 -61934619 - LTR1 LTR ERV1 0 785 12 26 30 0 0 chr20 10219636 10219669 -61934213 + AT_rich Low_complexity Low_complexity 1 33 0 532 265 94 0 chr20 10219767 10219948 -61933934 - MIR SINE MIR -1 261 64 195 139 0 0 chr20 10221214 10221250 -61932632 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 440 338 20 33 chr20 10222342 10222493 -61931389 + L2 LINE L2 3114 3262 -10 197 397 0 13 chr20 10222503 10222581 -61931301 + L2 LINE L2 3187 3263 -9 441 296 61 61 chr20 10222714 10222961 -61930921 - MIR SINE MIR 0 262 16 257 347 100 37 chr20 10223381 10223652 -61930230 - L2 LINE L2 -157 3115 2828 * 850 305 123 37 chr20 10223651 10224440 -61929442 - L2 LINE L2 -729 2585 1729 635 345 82 23 chr20 10225699 10226137 -61927745 - L2 LINE L2 -5 3267 2804 2813 112 9 14 chr20 10226508 10226891 -61926991 - MSTA LTR MaLR 0 428 46 2829 126 70 8 chr20 10226891 10227374 -61926508 - LTR10D LTR ERV1 0 513 1 2813 112 9 14 chr20 10227374 10227420 -61926462 - MSTA LTR MaLR -382 46 1 1736 289 166 22 chr20 10227511 10228568 -61925314 - L2 LINE L2 -1154 2160 951 811 214 62 26 chr20 10229047 10229239 -61924643 + MER58A DNA MER1_type 1 199 -25 21 57 0 0 chr20 10230475 10230510 -61923372 + AT_rich Low_complexity Low_complexity 1 35 0 333 249 272 6 chr20 10230649 10230822 -61923060 - L1M4 LINE L1 -3794 2352 2134 21 0 0 0 chr20 10232347 10232368 -61921514 + AT_rich Low_complexity Low_complexity 1 21 0 1362 136 40 9 chr20 10233119 10233347 -61920535 + MER46A DNA MER2_type 2 236 0 2266 99 0 0 chr20 10234409 10234703 -61919179 - AluSg SINE Alu -16 294 1 2234 108 10 0 chr20 10235680 10235975 -61917907 - AluSg SINE Alu -12 298 1 22 0 0 0 chr20 10237676 10237698 -61916184 + AT_rich Low_complexity Low_complexity 1 22 0 2213 112 3 0 chr20 10239145 10239440 -61914442 + AluJb SINE Alu 1 296 -16 234 150 0 0 chr20 10239440 10239480 -61914402 + (TA)n Simple_repeat Simple_repeat 1 40 0 667 128 40 8 chr20 10239963 10240088 -61913794 + L1MA6 LINE L1 6172 6300 0 348 204 65 46 chr20 10241511 10241619 -61912263 - MLT1K LTR MaLR -27 561 452 250 328 0 0 chr20 10242149 10242265 -61911617 + GA-rich Low_complexity Low_complexity 1 116 0 1874 149 40 6 chr20 10244582 10244930 -61908952 + MER46B DNA MER2_type 1 235 -1 2212 97 20 10 chr20 10244959 10245259 -61908623 - AluSp SINE Alu -9 304 2 27 29 0 0 chr20 10245617 10245651 -61908231 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr20 10247323 10247353 -61906529 + AT_rich Low_complexity Low_complexity 1 30 0 615 256 77 51 chr20 10248164 10248235 -61905647 - MLT1J1 LTR MaLR -126 320 252 2080 142 0 0 chr20 10248235 10248537 -61905345 + AluSx SINE Alu 1 302 -10 615 256 77 51 chr20 10248537 10248777 -61905105 - MLT1J1 LTR MaLR -194 252 1 1001 163 0 0 chr20 10249338 10249491 -61904391 + AluJo SINE Alu 1 153 -159 672 252 126 52 chr20 10249570 10249895 -61903987 + L1MEd LINE L1 20 368 -5751 412 290 46 0 chr20 10250137 10250268 -61903614 + L1MEd LINE L1 597 733 -5386 542 261 19 0 chr20 10250377 10250538 -61903344 - L1ME3 LINE L1 -278 5884 5721 550 194 75 75 chr20 10250689 10250849 -61903033 + MIR SINE MIR 8 167 -95 325 273 98 28 chr20 10252183 10252326 -61901556 + MIR SINE MIR 110 262 0 2766 164 42 43 chr20 10252397 10253000 -61900882 - L1MB3 LINE L1 -10 6173 5572 1030 48 0 0 chr20 10253490 10253614 -61900268 + AluY SINE Alu 176 299 -12 882 239 5 0 chr20 10254190 10254374 -61899508 - MER5A DNA MER1_type -2 187 3 541 306 38 24 chr20 10254993 10255202 -61898680 - MIR SINE MIR 0 262 51 587 225 39 42 chr20 10255222 10255475 -61898407 - MER106B DNA MER1_type 0 1059 1 1000 202 101 24 chr20 10255485 10255782 -61898100 + MER33 DNA MER1_type 3 322 -2 281 255 21 43 chr20 10255927 10256021 -61897861 - L3 LINE CR1 -276 1301 1210 1874 148 13 69 chr20 10256052 10256444 -61897438 + MLT1B LTR MaLR 21 390 0 557 115 10 6 chr20 10257253 10257352 -61896530 - L1ME LINE L1 -699 5463 5365 1005 184 29 0 chr20 10257421 10257628 -61896254 + MER20 DNA MER1_type 1 213 -6 210 343 201 34 chr20 10257710 10258089 -61895793 + L2 LINE L2 2831 3272 0 214 309 62 69 chr20 10258177 10258465 -61895417 - L2 LINE L2 -1421 1893 1608 2151 107 17 13 chr20 10259845 10260145 -61893737 - AluSx SINE Alu -11 301 1 2243 105 10 0 chr20 10260391 10260695 -61893187 + AluSp SINE Alu 1 307 -6 248 375 62 16 chr20 10260745 10260873 -61893009 + MIR3 SINE MIR 10 143 -65 2185 92 3 32 chr20 10262091 10262405 -61891477 + AluSx SINE Alu 1 305 -7 36 62 0 0 chr20 10262446 10262510 -61891372 + AT_rich Low_complexity Low_complexity 1 64 0 830 207 43 22 chr20 10263658 10263890 -61889992 + L1ME3A LINE L1 5929 6165 -5 2567 40 0 0 chr20 10264846 10265142 -61888740 - AluY SINE Alu -15 296 1 469 308 19 6 chr20 10265165 10265324 -61888558 - MIR SINE MIR -14 248 88 386 344 23 0 chr20 10266224 10266352 -61887530 - MIR SINE MIR -112 150 20 22 0 0 0 chr20 10266602 10266624 -61887258 + AT_rich Low_complexity Low_complexity 1 22 0 459 257 66 7 chr20 10266807 10266943 -61886939 + L2 LINE L2 3167 3310 -3 29 0 0 0 chr20 10268892 10268921 -61884961 + GC_rich Low_complexity Low_complexity 1 29 0 265 269 26 0 chr20 10269249 10269327 -61884555 + CT-rich Low_complexity Low_complexity 2 81 0 195 129 0 0 chr20 10269989 10270020 -61883862 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 401 155 0 0 chr20 10270023 10270094 -61883788 + L1ME LINE L1 5458 5528 -634 362 94 16 0 chr20 10270112 10270176 -61883706 + (GA)n Simple_repeat Simple_repeat 1 65 0 1451 235 111 16 chr20 10270176 10270715 -61883167 + L1ME1 LINE L1 5486 6065 -101 252 341 0 0 chr20 10270968 10271050 -61882832 - L2 LINE L2 -4 3268 3187 434 34 34 0 chr20 10271339 10271398 -61882484 + (TTTCC)n Simple_repeat Simple_repeat 5 65 0 1586 51 0 28 chr20 10272308 10272523 -61881359 - L1PA4 LINE L1 0 6155 5947 238 277 0 15 chr20 10272694 10272759 -61881123 - MIR SINE MIR -6 256 193 351 297 69 45 chr20 10272773 10272975 -61880907 + MLT1L LTR MaLR 22 228 -387 325 346 72 20 chr20 10273160 10273313 -61880569 - MIR SINE MIR -99 163 3 228 304 13 13 chr20 10273504 10273583 -61880299 + MIR SINE MIR 62 140 -68 712 303 35 4 chr20 10273607 10273838 -61880044 - MIR SINE MIR -24 238 1 380 230 18 44 chr20 10274283 10274396 -61879486 + MLT1J1 LTR MaLR 204 313 -133 236 319 0 0 chr20 10275710 10275782 -61878100 + MLT1J LTR MaLR 1 72 -439 403 285 123 12 chr20 10275805 10276058 -61877824 + MLT1J LTR MaLR 231 511 0 2453 75 3 0 chr20 10277111 10277418 -61876464 + AluY SINE Alu 1 308 -3 1106 202 4 40 chr20 10277679 10277907 -61875975 - MER58A DNA MER1_type -3 221 2 243 0 0 0 chr20 10278208 10278235 -61875647 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 270 0 0 0 chr20 10278234 10278264 -61875618 + (TC)n Simple_repeat Simple_repeat 2 31 0 546 219 8 47 chr20 10278639 10278767 -61875115 + MER5A DNA MER1_type 4 126 -63 192 77 0 0 chr20 10279502 10279528 -61874354 + (TA)n Simple_repeat Simple_repeat 2 27 0 2841 260 73 69 chr20 10279904 10280313 -61873569 - HAL1 LINE L1 0 2507 2101 277 75 38 0 chr20 10280313 10280366 -61873516 + (TA)n Simple_repeat Simple_repeat 1 55 0 2841 260 73 69 chr20 10280366 10281807 -61872075 - HAL1 LINE L1 -406 2101 649 467 301 111 10 chr20 10281849 10282048 -61871834 - MIR SINE MIR -7 255 37 1240 228 92 76 chr20 10283383 10283914 -61869968 + MLT1H LTR MaLR 1 582 -8 186 414 0 0 chr20 10284278 10284365 -61869517 - MIR SINE MIR -97 165 79 915 240 114 53 chr20 10285444 10285899 -61867983 + LTR33 LTR ERVL 39 521 0 40547 36 21 5 chr20 10286569 10292620 -61861262 + L1PA3 LINE L1 3 6154 -1 514 344 25 42 chr20 10293015 10293300 -61860582 + MLT1K LTR MaLR 97 376 -212 975 287 45 41 chr20 10293741 10294391 -61859491 - L2 LINE L2 0 3313 2666 321 280 33 88 chr20 10294394 10294576 -61859306 + HAL1 LINE L1 1130 1301 -1206 2552 148 5 0 chr20 10294728 10295140 -61858742 + L1PA15-16 LINE L1 2 415 -6434 3839 199 8 1 chr20 10295173 10295881 -61858001 - L1PA15-16 LINE L1 -5717 1132 420 8530 190 10 15 chr20 10295886 10298882 -61855000 + L1PA15-16 LINE L1 1506 4485 -2364 1128 112 17 48 chr20 10298870 10298911 -61854971 + L1P4 LINE L1 5313 5354 -797 * 2340 102 3 6 chr20 10298911 10299224 -61854658 - AluSp SINE Alu 0 313 2 1128 112 17 48 chr20 10299224 10299433 -61854449 + L1P4 LINE L1 5354 5540 -611 * 3556 230 49 65 chr20 10299428 10301240 -61852642 - L1MD1 LINE L1 -203 6039 4265 437 298 75 0 chr20 10301242 10301403 -61852479 + LTR16C LTR ERVL 318 490 -1 698 291 15 0 chr20 10301492 10301698 -61852184 + MER63A DNA MER1_type 1 209 -1 259 223 45 102 chr20 10302480 10302582 -61851300 - MIR SINE MIR -55 207 116 2145 62 0 0 chr20 10302582 10302856 -61851026 + L1PA7 LINE L1 5875 6148 -6 259 223 45 102 chr20 10302856 10302910 -61850972 - MIR SINE MIR -146 116 60 7062 40 1 7 chr20 10303095 10303987 -61849895 + L1PA5 LINE L1 5275 6161 0 1464 153 20 51 chr20 10304003 10304298 -61849584 + MER51A LTR ERV1 268 553 -81 908 228 135 15 chr20 10304339 10304739 -61849143 - LTR16A1 LTR ERVL 0 457 10 2305 110 7 0 chr20 10304882 10305190 -61848692 - AluSq SINE Alu -3 310 1 317 194 0 15 chr20 10305555 10305622 -61848260 + MLT1H LTR MaLR 259 324 -225 495 296 111 60 chr20 10306634 10306850 -61847032 - MIR SINE MIR -21 241 15 6722 142 31 9 chr20 10307225 10308429 -61845453 + Tigger3b DNA MER2_type 1 1230 -1 491 224 230 63 chr20 10308708 10308882 -61845000 - MIR SINE MIR -2 260 58 1145 165 31 145 chr20 10308901 10309288 -61844594 + MLT1A1 LTR MaLR 12 354 -11 1826 129 0 84 chr20 10309556 10309912 -61843970 + AluSx SINE Alu 1 312 0 1373 232 12 57 chr20 10310726 10311148 -61842734 - LTR16A1 LTR ERVL -6 451 49 1527 193 39 20 chr20 10311562 10311868 -61842014 + AluJo SINE Alu 1 312 0 1566 210 3 0 chr20 10312321 10312612 -61841270 - AluSx SINE Alu -20 292 1 1220 227 145 10 chr20 10312739 10313140 -61840742 + L1ME1 LINE L1 5704 6158 -8 617 348 82 0 chr20 10314243 10314476 -61839406 - MIR SINE MIR -10 252 1 1126 257 93 35 chr20 10315248 10315765 -61838117 + MLT1H LTR MaLR 3 549 0 1995 145 42 0 chr20 10315784 10316115 -61837767 - MER7A DNA MER2_type 0 346 4 410 256 0 55 chr20 10316648 10316812 -61837070 + MER112 DNA MER1_type 100 254 -6 2684 151 14 0 chr20 10317889 10318332 -61835550 + L1PA16 LINE L1 5718 6166 0 199 268 0 0 chr20 10318462 10318503 -61835379 + MER5B DNA MER1_type 3 43 -135 537 247 65 0 chr20 10318512 10318682 -61835200 + L1M4 LINE L1 4766 4946 -1200 235 291 76 0 chr20 10318706 10318785 -61835097 - LTR16C LTR ERVL -269 222 138 511 240 0 8 chr20 10318906 10319035 -61834847 + MER94 DNA DNA 4 131 -3 576 314 66 63 chr20 10320440 10320635 -61833247 + L2 LINE L2 2912 3110 -162 1769 190 19 27 chr20 10320635 10321003 -61832879 + MLT1A1 LTR MaLR 1 365 0 576 314 66 63 chr20 10321003 10321157 -61832725 + L2 LINE L2 3110 3262 -10 197 333 0 0 chr20 10321206 10321266 -61832616 + L2 LINE L2 3248 3307 -6 988 275 62 17 chr20 10323553 10323936 -61829946 + LTR16A1 LTR ERVL 80 457 0 182 295 16 0 chr20 10324001 10324062 -61829820 - MIR SINE MIR -14 248 187 366 61 0 0 chr20 10324279 10324328 -61829554 + (TG)n Simple_repeat Simple_repeat 1 49 0 207 320 31 82 chr20 10324334 10324431 -61829451 - MIR SINE MIR -160 102 11 181 133 0 0 chr20 10324738 10324768 -61829114 + MIR SINE MIR 113 142 -120 1140 289 85 8 chr20 10325396 10325797 -61828085 + MLT1H LTR MaLR 118 549 0 464 322 87 26 chr20 10325939 10326169 -61827713 + MIR SINE MIR 3 246 -16 21 0 0 0 chr20 10326923 10326944 -61826938 + AT_rich Low_complexity Low_complexity 1 21 0 1884 255 95 14 chr20 10327263 10327887 -61825995 - L1ME3 LINE L1 -49 6113 5440 262 387 16 0 chr20 10330024 10330148 -61823734 + L2 LINE L2 2927 3052 -220 209 315 34 48 chr20 10330249 10330395 -61823487 + MIR SINE MIR 109 252 -10 566 269 28 33 chr20 10331339 10331592 -61822290 + L1MC4a LINE L1 5644 5818 -541 348 24 0 0 chr20 10331626 10331667 -61822215 + (TG)n Simple_repeat Simple_repeat 2 42 0 193 320 60 40 chr20 10332795 10332995 -61820887 + L2 LINE L2 1519 1722 -1592 357 213 50 50 chr20 10334387 10334528 -61819354 - L1ME4a LINE L1 -1 6120 5980 551 296 85 38 chr20 10334551 10335106 -61818776 - L1ME4a LINE L1 -189 5932 5352 29 0 0 0 chr20 10335381 10335410 -61818472 + AT_rich Low_complexity Low_complexity 1 29 0 1693 193 0 7 chr20 10335410 10335695 -61818187 - AluJo SINE Alu -26 286 4 226 286 101 10 chr20 10336419 10336618 -61817264 - L1ME4a LINE L1 -2166 3980 3764 207 100 0 0 chr20 10337620 10337650 -61816232 + (TTA)n Simple_repeat Simple_repeat 1 30 0 315 257 14 0 chr20 10337701 10337775 -61816107 + L1ME3A LINE L1 5561 5635 -535 1406 229 51 88 chr20 10337833 10338404 -61815478 + L1ME3A LINE L1 5615 6164 -6 225 0 0 0 chr20 10339696 10339721 -61814161 + (TC)n Simple_repeat Simple_repeat 2 26 0 896 206 0 0 chr20 10339721 10339886 -61813996 - FAM SINE Alu -10 165 1 947 212 31 50 chr20 10340503 10340725 -61813157 + MER20 DNA MER1_type 2 219 0 648 242 24 12 chr20 10341121 10341286 -61812596 + MER3 DNA MER1_type 1 167 -42 275 246 0 0 chr20 10341308 10341373 -61812509 + MER3 DNA MER1_type 143 207 -2 1344 131 13 97 chr20 10341390 10341688 -61812194 + L1MA4A LINE L1 6020 6292 -11 1655 171 54 13 chr20 10341862 10342041 -61811841 - AluJo SINE Alu -2 310 113 352 0 20 20 chr20 10342041 10342090 -61811792 + (TTTTA)n Simple_repeat Simple_repeat 5 53 0 1655 171 54 13 chr20 10342090 10342208 -61811674 - AluJo SINE Alu -199 113 1 257 299 0 0 chr20 10342209 10342276 -61811606 - MER5A DNA MER1_type -114 75 9 1050 190 5 28 chr20 10342292 10342503 -61811379 + MER3 DNA MER1_type 1 206 -3 510 231 33 83 chr20 10342534 10342776 -61811106 + MER5C DNA MER1_type 43 272 -52 1945 159 46 3 chr20 10342790 10343181 -61810701 + L1MA5A LINE L1 5886 6293 -4 968 139 46 109 chr20 10343204 10343442 -61810440 + AluJb SINE Alu 81 303 -9 746 137 0 16 chr20 10343739 10343899 -61809983 - AluSc SINE Alu 0 327 170 823 149 88 136 chr20 10344727 10344960 -61808922 + MER33 DNA MER1_type 6 224 -2361 2185 108 0 3 chr20 10344960 10345256 -61808626 + AluSg SINE Alu 1 295 -15 823 149 88 136 chr20 10345256 10345317 -61808565 + MER33 DNA MER1_type 224 286 -38 215 61 30 0 chr20 10346653 10346686 -61807196 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 416 202 82 99 chr20 10346771 10347014 -61806868 + L1MC5 LINE L1 7696 7934 -27 * 916 191 39 85 chr20 10347004 10347334 -61806548 + L1ME3A LINE L1 5851 6165 -5 354 348 62 17 chr20 10347633 10347811 -61806071 - MIR SINE MIR -75 187 2 1095 275 77 31 chr20 10349170 10349875 -61804007 + L1MCa LINE L1 1184 2125 -4482 202 306 198 22 chr20 10350796 10351018 -61802864 - MIR SINE MIR 0 262 2 1878 200 57 11 chr20 10351141 10351581 -61802301 - MLT1C LTR MaLR 0 467 8 247 268 0 0 chr20 10351908 10351964 -61801918 - L2 LINE L2 -2 3311 3256 1208 250 159 50 chr20 10352611 10353248 -61800634 - MER20B DNA MER1_type -76 707 2 900 251 93 5 chr20 10353310 10353525 -61800357 - MIR SINE MIR -9 253 20 414 200 70 0 chr20 10353534 10353634 -61800248 - Charlie2 DNA MER1_type -2297 565 459 212 323 101 20 chr20 10353749 10353848 -61800034 + L2 LINE L2 3207 3313 0 2008 157 40 40 chr20 10353891 10354287 -61799595 - MSTD LTR MaLR 0 396 1 225 278 14 14 chr20 10355418 10355490 -61798392 - L3 LINE CR1 -436 1141 1070 204 97 0 0 chr20 10356075 10356106 -61797776 + (TA)n Simple_repeat Simple_repeat 1 31 0 2299 162 47 0 chr20 10357348 10357756 -61796126 - MSTA LTR MaLR -1 427 1 180 0 0 0 chr20 10358251 10358271 -61795611 + (CCA)n Simple_repeat Simple_repeat 1 20 0 284 292 142 35 chr20 10358286 10358512 -61795370 + L2 LINE L2 2728 2977 -337 238 291 101 0 chr20 10359172 10359251 -61794631 + L1MC/D LINE L1 5727 5813 -531 209 305 53 53 chr20 10359405 10359536 -61794346 - MIR SINE MIR -57 151 21 942 260 226 28 chr20 10360542 10361007 -61792875 + Charlie2 DNA MER1_type 39 595 -2267 1968 239 142 24 chr20 10361117 10361859 -61792023 + Charlie2a DNA MER1_type 1468 2296 -566 988 244 0 0 chr20 10361876 10362081 -61791801 + AluJo SINE Alu 68 272 -40 1660 191 3 13 chr20 10364067 10364371 -61789511 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr20 10365994 10366015 -61787867 + AT_rich Low_complexity Low_complexity 1 21 0 1014 224 112 58 chr20 10366017 10366633 -61787249 - L1MC5 LINE L1 -35 7926 7278 1376 152 33 13 chr20 10367161 10367519 -61786363 - MSTB LTR MaLR 0 426 1 991 260 31 24 chr20 10367880 10368168 -61785714 - LTR16C LTR ERVL 0 491 202 196 313 12 125 chr20 10368449 10368689 -61785193 + L2 LINE L2 2301 2513 -801 276 100 0 0 chr20 10368821 10368861 -61785021 + (TG)n Simple_repeat Simple_repeat 1 40 0 1761 145 14 3 chr20 10369572 10369869 -61784013 + AluSx SINE Alu 1 300 -12 682 314 57 26 chr20 10370940 10371471 -61782411 + L1ME LINE L1 3878 4424 -1722 255 306 20 0 chr20 10371554 10371652 -61782230 + L1ME LINE L1 4952 5051 -1095 311 318 16 0 chr20 10371776 10371879 -61782003 + L1ME LINE L1 5162 5287 -854 21 0 0 0 chr20 10371879 10371900 -61781982 + AT_rich Low_complexity Low_complexity 1 21 0 669 290 32 9 chr20 10371905 10372126 -61781756 + MIR SINE MIR 5 230 -32 437 316 56 24 chr20 10372491 10372781 -61781101 + L1ME LINE L1 5511 5727 -394 264 91 0 0 chr20 10372975 10373019 -61780863 + (TG)n Simple_repeat Simple_repeat 2 45 0 7870 46 11 0 chr20 10373540 10375271 -61778611 + L1PA5 LINE L1 4407 6147 -7 27 0 0 0 chr20 10375271 10375298 -61778584 + AT_rich Low_complexity Low_complexity 1 27 0 1642 231 19 24 chr20 10375668 10375742 -61778140 + L1MC4a LINE L1 7324 7397 -411 1842 141 73 17 chr20 10375742 10376097 -61777785 + THE1C LTR MaLR 1 375 0 1642 231 19 24 chr20 10376097 10376447 -61777435 + L1MC4a LINE L1 7397 7746 -62 1056 164 15 5 chr20 10376459 10376654 -61777228 - MLT1A1 LTR MaLR -132 233 37 458 278 158 56 chr20 10377803 10378234 -61775648 - MLT1J LTR MaLR -34 477 3 617 261 187 11 chr20 10378530 10378832 -61775050 - L1ME4a LINE L1 -286 5835 5480 774 233 39 49 chr20 10380372 10380668 -61773214 + L1MC4 LINE L1 7741 8035 -7 946 97 0 0 chr20 10380668 10380802 -61773080 + L1MA2 LINE L1 6171 6304 0 429 223 0 36 chr20 10382566 10382678 -61771204 - L1MA9 LINE L1 -38 6274 6167 490 151 13 164 chr20 10382745 10382904 -61770978 + L1MA9 LINE L1 5855 5989 -323 299 226 303 9 chr20 10383572 10383681 -61770201 + MLT1I LTR MaLR 29 137 -272 207 0 0 0 chr20 10384081 10384104 -61769778 + (CCA)n Simple_repeat Simple_repeat 1 23 0 226 363 106 11 chr20 10384493 10384870 -61769012 - L2 LINE L2 -748 2566 2154 852 287 97 18 chr20 10384909 10385299 -61768583 + LTR16B LTR ERVL 38 458 -6 396 278 73 59 chr20 10385916 10386189 -61767693 + HAL1b LINE L1 440 716 -632 229 197 28 14 chr20 10386331 10386402 -61767480 + (TA)n Simple_repeat Simple_repeat 1 72 0 1168 242 106 56 chr20 10386439 10386803 -61767079 - L1MC4a LINE L1 -1929 5879 5485 2661 48 0 12 chr20 10386803 10387177 -61766705 + L1PA7 LINE L1 5807 6176 0 1168 242 106 56 chr20 10387177 10387274 -61766608 - L1MC4a LINE L1 -2323 5485 5394 591 282 95 41 chr20 10387343 10387932 -61765950 + HAL1b LINE L1 719 1339 -9 295 296 105 26 chr20 10388585 10388737 -61765145 - MIR SINE MIR -49 213 50 2272 118 0 0 chr20 10389066 10389372 -61764510 + AluSx SINE Alu 1 306 -6 1136 257 3 31 chr20 10389420 10389708 -61764174 - MLT1H LTR MaLR -231 318 39 1496 182 31 11 chr20 10389961 10390247 -61763635 - AluJo SINE Alu -13 299 8 405 293 141 30 chr20 10390582 10390668 -61763214 - L1ME4a LINE L1 -72 6049 5974 2156 77 7 0 chr20 10390668 10390940 -61762942 - AluSx SINE Alu 0 312 39 405 293 141 30 chr20 10390940 10390954 -61762928 - L1ME4a LINE L1 -147 5974 5963 423 56 0 0 chr20 10390954 10391008 -61762874 + (CA)n Simple_repeat Simple_repeat 2 55 0 405 293 141 30 chr20 10391008 10391210 -61762672 - L1ME4a LINE L1 -158 5963 5712 4220 165 18 15 chr20 10391413 10391789 -61762093 + L1PA15 LINE L1 3572 3945 -2220 2758 26 0 0 chr20 10391789 10392100 -61761782 + AluYa5 SINE Alu 1 311 0 4220 165 18 15 chr20 10392100 10394252 -61759630 + L1PA15 LINE L1 3945 6152 -13 207 69 0 0 chr20 10394303 10394332 -61759550 + (TAA)n Simple_repeat Simple_repeat 1 29 0 1790 175 38 15 chr20 10394501 10394844 -61759038 - MLT1A1 LTR MaLR -1 364 14 4841 187 53 49 chr20 10395118 10396627 -61757255 - L1MD2 LINE L1 -17 6602 5075 521 233 11 23 chr20 10396632 10396808 -61757074 - L1MD2 LINE L1 -3990 2416 2243 314 87 0 0 chr20 10396824 10396870 -61757012 + MADE1 DNA Mariner 1 46 -34 1353 191 3 68 chr20 10396871 10397180 -61756702 - AluJo SINE Alu -23 289 1 348 289 7 22 chr20 10397183 10397318 -61756564 - L1MD2 LINE L1 -4202 2204 2072 5825 227 54 24 chr20 10397333 10399284 -61754598 - L1MD2 LINE L1 -4387 2019 7 781 265 45 59 chr20 10399285 10399722 -61754160 + L2 LINE L2 2690 3113 -200 847 268 40 0 chr20 10400241 10400491 -61753391 - MIR SINE MIR 0 262 3 268 270 0 0 chr20 10401115 10401189 -61752693 + MER116 DNA Mariner 5 78 -2 22 35 0 0 chr20 10402423 10402452 -61751430 + AT_rich Low_complexity Low_complexity 1 29 0 480 345 109 9 chr20 10402455 10402675 -61751207 - MIR SINE MIR 0 262 21 1866 204 87 40 chr20 10403673 10404179 -61749703 + MLT1H LTR MaLR 17 546 -3 291 382 47 12 chr20 10404409 10404579 -61749303 + MIR3 SINE MIR 16 191 -17 364 277 10 0 chr20 10404654 10404755 -61749127 - L2 LINE L2 -2 3311 3210 524 284 77 16 chr20 10404758 10404952 -61748930 - MER63A DNA MER1_type -4 206 1 196 333 40 27 chr20 10405070 10405220 -61748662 - L2 LINE L2 -293 2979 2828 194 252 102 55 chr20 10405221 10405348 -61748534 - L2 LINE L2 -842 2472 2340 647 335 145 17 chr20 10405482 10406178 -61747704 - L2 LINE L2 -1223 2091 1307 206 338 154 17 chr20 10406270 10406510 -61747372 - L2 LINE L2 -2 3311 3039 208 288 136 32 chr20 10406511 10406636 -61747246 + MIR SINE MIR 93 230 -32 245 274 21 21 chr20 10407006 10407101 -61746781 - MLT1K LTR MaLR 0 588 494 331 306 60 82 chr20 10407218 10407387 -61746495 - MLT1K LTR MaLR -219 369 207 658 176 181 33 chr20 10407387 10407569 -61746313 + MER3 DNA MER1_type 1 209 0 331 306 60 82 chr20 10407569 10407680 -61746202 - MLT1K LTR MaLR -381 207 95 811 287 70 0 chr20 10408112 10408412 -61745470 - MER102b DNA MER1_type -12 329 9 980 250 0 5 chr20 10408690 10408906 -61744976 + LTR16C LTR ERVL 277 491 0 764 192 0 70 chr20 10410111 10410283 -61743599 + MER5B DNA MER1_type 13 172 -6 469 264 16 66 chr20 10410422 10410604 -61743278 + MIR SINE MIR 17 189 -73 459 189 0 87 chr20 10410627 10410823 -61743059 + (TA)n Simple_repeat Simple_repeat 2 180 0 23 54 0 0 chr20 10411032 10411069 -61742813 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr20 10411080 10411107 -61742775 + AT_rich Low_complexity Low_complexity 1 27 0 2077 120 79 15 chr20 10411217 10411559 -61742323 + THE1B LTR MaLR 1 364 0 11722 90 8 11 chr20 10411559 10411930 -61741952 + THE1B-int LTR MaLR 1 371 -1209 2329 103 3 3 chr20 10411930 10412241 -61741641 - AluSp SINE Alu -2 311 1 11722 90 8 11 chr20 10412241 10413453 -61740429 + THE1B-int LTR MaLR 371 1580 0 342 94 41 0 chr20 10413453 10413520 -61740362 + THE1A LTR MaLR 1 41 -314 * 465 130 14 0 chr20 10413516 10413585 -61740297 + THE1C LTR MaLR 306 375 0 336 352 73 18 chr20 10415100 10415319 -61738563 - MIR SINE MIR -17 245 15 1317 249 81 3 chr20 10415482 10415815 -61738067 - LTR16C LTR ERVL -23 468 110 247 272 22 0 chr20 10417078 10417170 -61736712 + L1MC/D LINE L1 5186 5279 -867 339 314 110 55 chr20 10417180 10417671 -61736211 + L1MC/D LINE L1 5323 5841 -401 21 0 0 0 chr20 10419367 10419388 -61734494 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr20 10421548 10421571 -61732311 + AT_rich Low_complexity Low_complexity 1 23 0 284 158 13 0 chr20 10421719 10421795 -61732087 + (TA)n Simple_repeat Simple_repeat 2 78 0 774 196 0 0 chr20 10422440 10422573 -61731309 - FLAM_C SINE Alu 0 133 1 345 341 97 14 chr20 10423207 10423424 -61730458 + L1ME LINE L1 5409 5643 -478 208 67 0 44 chr20 10423437 10423482 -61730400 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 27 81 0 0 chr20 10423545 10423607 -61730275 + AT_rich Low_complexity Low_complexity 1 62 0 391 298 48 8 chr20 10423719 10423843 -61730039 + MLT1J LTR MaLR 3 131 -380 577 240 139 50 chr20 10423906 10424164 -61729718 + MLT1J LTR MaLR 230 510 -1 25 0 0 0 chr20 10425023 10425048 -61728834 + AT_rich Low_complexity Low_complexity 1 25 0 2330 88 3 0 chr20 10426678 10426975 -61726907 - AluSq SINE Alu -15 298 1 813 221 70 120 chr20 10426979 10427405 -61726477 - L1ME3A LINE L1 -4 6166 5762 * 3230 169 96 3 chr20 10427396 10428041 -61725841 - L1MB4 LINE L1 0 6180 5476 717 294 73 45 chr20 10428069 10428600 -61725282 - L1ME3A LINE L1 -393 5769 5222 441 98 54 0 chr20 10428661 10428773 -61725109 + (TA)n Simple_repeat Simple_repeat 2 119 0 1093 252 136 29 chr20 10428779 10429295 -61724587 - L1MC4a LINE L1 -1875 5933 5363 267 280 65 65 chr20 10429415 10429508 -61724374 - MER5A DNA MER1_type -83 106 14 1416 96 0 0 chr20 10429832 10430040 -61723842 + AluSc SINE Alu 103 310 0 259 32 0 0 chr20 10430009 10430120 -61723762 + (TAA)n Simple_repeat Simple_repeat 1 111 0 * 294 282 13 0 chr20 10430540 10430618 -61723264 - MIR SINE MIR -27 235 157 336 24 0 0 chr20 10431741 10431782 -61722100 + (CA)n Simple_repeat Simple_repeat 1 41 0 1269 251 87 39 chr20 10432099 10432822 -61721060 + HAL1b LINE L1 343 1289 -59 2125 122 3 0 chr20 10437636 10437930 -61715952 + AluSx SINE Alu 3 297 -15 25 51 0 0 chr20 10438806 10438845 -61715037 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr20 10438938 10438960 -61714922 + AT_rich Low_complexity Low_complexity 1 22 0 951 272 101 17 chr20 10439960 10440365 -61713517 - LTR16A1 LTR ERVL -18 439 1 439 220 120 65 chr20 10440405 10440605 -61713277 + L2 LINE L2 3099 3309 -4 207 297 0 54 chr20 10440793 10440867 -61713015 - MIR SINE MIR 0 262 193 455 258 172 7 chr20 10440869 10441020 -61712862 - MER5A DNA MER1_type 0 189 14 833 270 0 0 chr20 10441043 10441221 -61712661 - MIR SINE MIR -75 187 10 1080 269 109 16 chr20 10441834 10442283 -61711599 - LTR16C LTR ERVL 0 491 1 26 30 0 0 chr20 10442477 10442510 -61711372 + AT_rich Low_complexity Low_complexity 1 33 0 507 267 30 0 chr20 10443269 10443400 -61710482 - MIR SINE MIR -22 240 106 528 260 85 22 chr20 10443976 10444199 -61709683 + MIR SINE MIR 15 251 -11 575 293 18 0 chr20 10444312 10444476 -61709406 + MIR SINE MIR 60 226 -36 2909 205 83 20 chr20 10444665 10445363 -61708519 - Charlie1a DNA MER1_type -712 743 2 209 331 50 14 chr20 10445398 10445537 -61708345 - L2 LINE L2 -829 2485 2342 384 271 8 0 chr20 10445880 10446002 -61707880 + L1ME3 LINE L1 5391 5513 -651 321 274 0 0 chr20 10446054 10446171 -61707711 + (TA)n Simple_repeat Simple_repeat 2 118 0 740 287 99 18 chr20 10446272 10446655 -61707227 + L1ME3 LINE L1 5536 5949 -213 29 28 0 0 chr20 10446906 10446942 -61706940 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr20 10447158 10447187 -61706695 + AT_rich Low_complexity Low_complexity 1 29 0 1539 165 15 11 chr20 10447303 10447563 -61706319 - AluJo SINE Alu -10 302 42 236 308 0 22 chr20 10448616 10448707 -61705175 - L1MC4 LINE L1 -1340 6702 6614 321 276 0 0 chr20 10448716 10448839 -61705043 + (TA)n Simple_repeat Simple_repeat 1 123 0 1669 193 7 0 chr20 10449606 10449902 -61703980 + AluJo SINE Alu 1 298 -14 22 35 0 0 chr20 10450069 10450098 -61703784 + AT_rich Low_complexity Low_complexity 1 29 0 226 77 0 103 chr20 10450545 10450584 -61703298 - HSMAR1 DNA Mariner 0 1287 1253 222 37 0 0 chr20 10450614 10450641 -61703241 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 195 100 0 0 chr20 10450984 10451014 -61702868 + (CA)n Simple_repeat Simple_repeat 1 30 0 564 327 71 40 chr20 10451018 10451440 -61702442 + L2 LINE L2 2136 2570 -744 678 303 126 39 chr20 10451610 10452022 -61701860 - MLT1H LTR MaLR -100 449 2 1031 32 0 0 chr20 10452132 10452258 -61701624 - L1PA4 LINE L1 0 6155 6030 326 248 50 59 chr20 10452291 10452392 -61701490 + L2 LINE L2 3156 3255 -17 253 289 56 0 chr20 10453298 10453388 -61700494 + L1ME2 LINE L1 5579 5673 -448 823 325 13 0 chr20 10453455 10453692 -61700190 + MIR SINE MIR 12 251 -11 30 0 0 0 chr20 10454299 10454329 -61699553 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr20 10454436 10454457 -61699425 + AT_rich Low_complexity Low_complexity 1 21 0 610 345 37 34 chr20 10455837 10456217 -61697665 - L3 LINE CR1 -17 1560 1180 639 187 120 0 chr20 10456293 10456443 -61697439 - MIR SINE MIR -3 259 92 306 379 33 0 chr20 10458083 10458236 -61695646 + MIR SINE MIR 88 245 -17 2256 84 0 7 chr20 10459230 10459538 -61694344 + AluSx SINE Alu 1 306 0 666 226 60 93 chr20 10459816 10459926 -61693956 - MIR SINE MIR -2 260 148 2307 98 0 7 chr20 10459926 10460233 -61693649 + AluSx SINE Alu 1 305 -7 666 226 60 93 chr20 10460233 10460370 -61693512 - MIR SINE MIR -114 148 21 26 0 0 0 chr20 10460405 10460431 -61693451 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr20 10460507 10460535 -61693347 + AT_rich Low_complexity Low_complexity 1 28 0 204 288 100 12 chr20 10460642 10460722 -61693160 - MIR3 SINE MIR -3 205 119 931 204 23 42 chr20 10461904 10462168 -61691714 + L1ME2 LINE L1 5792 6050 -114 1941 141 161 12 chr20 10462192 10462597 -61691285 - L1PA16 LINE L1 -1 6165 5701 456 195 0 2 chr20 10462589 10462685 -61691197 - L1M4 LINE L1 -611 5563 5469 * 393 237 51 0 chr20 10462687 10462805 -61691077 + L1ME2 LINE L1 6040 6163 -1 322 282 16 85 chr20 10463632 10463820 -61690062 + LTR16A1 LTR ERVL 2 176 -281 256 196 0 0 chr20 10463917 10463963 -61689919 + LTR16A1 LTR ERVL 245 290 -167 426 188 152 25 chr20 10464775 10465023 -61688859 - MLT1H LTR MaLR -13 536 207 358 324 22 7 chr20 10465721 10465860 -61688022 + MER117 DNA MER1_type 21 161 -36 749 230 86 19 chr20 10466071 10466280 -61687602 + MIR SINE MIR 40 262 0 1546 262 180 5 chr20 10466491 10467052 -61686830 - MLT2F LTR ERVL -4 659 1 385 298 85 48 chr20 10467068 10467256 -61686626 + MIR3 SINE MIR 9 203 -5 584 316 73 9 chr20 10468061 10468279 -61685603 + LTR16A LTR ERVL 207 438 -12 24 0 0 0 chr20 10468483 10468507 -61685375 + AT_rich Low_complexity Low_complexity 1 24 0 240 35 0 0 chr20 10468653 10468682 -61685200 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 515 196 0 0 chr20 10468834 10468931 -61684951 - MER5A DNA MER1_type -5 184 88 329 297 71 32 chr20 10468945 10469100 -61684782 + L2 LINE L2 3110 3270 -2 409 268 10 0 chr20 10470104 10470201 -61683681 + L2 LINE L2 3169 3266 -6 626 200 101 101 chr20 10470771 10471169 -61682713 - MLT1H LTR MaLR 0 549 86 1285 65 12 0 chr20 10471428 10471598 -61682284 + L1PA4 LINE L1 5981 6152 -3 543 333 26 4 chr20 10471905 10472136 -61681746 - MIR SINE MIR -26 236 1 555 225 12 23 chr20 10472380 10472641 -61681241 + GA-rich Low_complexity Low_complexity 1 257 0 909 316 80 29 chr20 10473405 10473858 -61680024 + LTR16C LTR ERVL 3 478 -13 875 253 192 47 chr20 10474851 10475357 -61678525 - MLT1G LTR MaLR 0 590 12 369 0 0 0 chr20 10475791 10475832 -61678050 + (TG)n Simple_repeat Simple_repeat 1 41 0 294 242 0 0 chr20 10476390 10476456 -61677426 + LTR16C LTR ERVL 426 491 0 22 0 0 0 chr20 10476974 10476996 -61676886 + AT_rich Low_complexity Low_complexity 1 22 0 592 263 126 10 chr20 10477123 10477321 -61676561 - MIR SINE MIR -22 240 20 670 292 123 42 chr20 10478449 10478478 -61675404 - MLT1J LTR MaLR -45 466 441 1927 167 0 0 chr20 10478478 10478777 -61675105 - AluJb SINE Alu -13 299 1 670 292 123 42 chr20 10478777 10479178 -61674704 - MLT1J LTR MaLR -70 441 1 214 229 34 8 chr20 10479453 10479571 -61674311 + (TA)n Simple_repeat Simple_repeat 1 121 0 1371 137 49 4 chr20 10479594 10479820 -61674062 - MER46A DNA MER2_type 0 236 1 33 66 0 0 chr20 10480167 10480228 -61673654 + AT_rich Low_complexity Low_complexity 1 61 0 724 174 8 0 chr20 10480912 10481044 -61672838 - FLAM_C SINE Alu 0 133 1 183 42 0 0 chr20 10481090 10481114 -61672768 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 766 283 22 9 chr20 10481749 10481975 -61671907 - MIR SINE MIR 0 262 34 249 222 16 0 chr20 10482565 10482628 -61671254 - MER116 DNA Mariner -2 78 15 206 237 0 0 chr20 10483563 10483601 -61670281 + MIR SINE MIR 108 145 -63 760 284 84 9 chr20 10484077 10484292 -61669590 - MIR SINE MIR -31 231 1 627 246 161 42 chr20 10484533 10484919 -61668963 + MLT1J2 LTR MaLR 1 432 -18 1040 215 9 27 chr20 10485068 10485291 -61668591 + MER20 DNA MER1_type 1 219 0 2411 90 3 0 chr20 10485519 10485831 -61668051 + AluSp SINE Alu 1 313 0 399 341 43 12 chr20 10485866 10486030 -61667852 + MIR SINE MIR 84 252 -10 384 243 271 0 chr20 10488091 10488235 -61665647 - MER5A DNA MER1_type 0 189 7 181 299 117 13 chr20 10488259 10488336 -61665546 + L3 LINE CR1 1484 1568 -9 779 318 19 19 chr20 10488699 10488960 -61664922 - MIR SINE MIR 0 262 2 28 29 0 0 chr20 10489752 10489787 -61664095 + AT_rich Low_complexity Low_complexity 1 35 0 2153 225 40 41 chr20 10490233 10490864 -61663018 - L1ME2 LINE L1 -10 6154 5525 462 311 33 22 chr20 10491305 10491414 -61662468 + MIR SINE MIR 67 180 -82 761 210 45 19 chr20 10491414 10491571 -61662311 + FRAM SINE Alu 1 161 -5 462 311 33 22 chr20 10491571 10491641 -61662241 + MIR SINE MIR 180 248 -14 2645 19 0 7 chr20 10492005 10492315 -61661567 - AluY SINE Alu -3 308 1 295 275 117 85 chr20 10492797 10493298 -61660584 + L2 LINE L2 1739 3167 -146 620 320 81 13 chr20 10493347 10493581 -61660301 - MIR SINE MIR 0 262 13 458 273 167 13 chr20 10494710 10494860 -61659022 - MER5A DNA MER1_type -6 183 11 830 209 6 0 chr20 10494901 10495064 -61658818 - MER5A DNA MER1_type -23 166 3 557 159 39 154 chr20 10497150 10497332 -61656550 - MER20 DNA MER1_type -58 161 1 1034 62 0 0 chr20 10499458 10499586 -61654296 + AluY SINE Alu 177 304 -7 965 296 33 13 chr20 10499943 10500341 -61653541 + MLT1J LTR MaLR 106 511 0 312 269 0 32 chr20 10500589 10500682 -61653200 - L1MC4 LINE L1 -1339 6703 6614 10506 204 58 24 chr20 10501488 10501668 -61652214 + L1MC3 LINE L1 4181 4353 -3432 4406 105 9 3 chr20 10501668 10502314 -61651568 - L1PA11 LINE L1 -1 6173 5524 10506 204 58 24 chr20 10502314 10505617 -61648265 + L1MC3 LINE L1 4353 7785 0 1008 167 23 23 chr20 10505639 10505855 -61648027 + L1MB3 LINE L1 5965 6180 -3 212 218 126 23 chr20 10506307 10506394 -61647488 - MIR SINE MIR -35 227 132 337 277 59 0 chr20 10506624 10506731 -61647151 + MIR SINE MIR 38 155 -62 452 321 24 18 chr20 10506882 10507050 -61646832 - MLT1J2 LTR MaLR -29 421 253 1040 201 5 5 chr20 10507871 10508060 -61645822 - MER5A DNA MER1_type 0 189 1 823 153 0 8 chr20 10509125 10509256 -61644626 + FLAM_C SINE Alu 1 130 -3 2179 92 3 10 chr20 10509846 10510141 -61643741 - AluSx SINE Alu -18 294 2 208 163 0 23 chr20 10510160 10510203 -61643679 + CT-rich Low_complexity Low_complexity 4 45 0 637 280 43 10 chr20 10511546 10511753 -61642129 - LTR16A1 LTR ERVL -13 444 231 815 198 43 32 chr20 10513006 10513193 -61640689 - MER5A DNA MER1_type 0 189 1 249 216 0 0 chr20 10514524 10514575 -61639307 + MIR SINE MIR 87 137 -71 2069 174 155 54 chr20 10514758 10515350 -61638532 - MLT1E1 LTR MaLR 0 654 3 302 250 73 10 chr20 10515419 10515515 -61638367 + MIR SINE MIR 105 206 -56 207 351 18 35 chr20 10516766 10516880 -61637002 - MIR SINE MIR -67 141 30 883 222 5 11 chr20 10518891 10519080 -61634802 + MER5A DNA MER1_type 2 189 0 300 354 31 15 chr20 10519100 10519230 -61634652 - MIR3 SINE MIR -63 145 14 2114 145 3 0 chr20 10519837 10520148 -61633734 + AluSx SINE Alu 1 312 0 237 309 82 18 chr20 10520602 10520712 -61633170 + L2 LINE L2 3197 3313 0 30 0 0 0 chr20 10524038 10524068 -61629814 + AT_rich Low_complexity Low_complexity 1 30 0 309 283 101 50 chr20 10524893 10525049 -61628833 + MIR SINE MIR 53 216 -46 487 231 98 69 chr20 10525049 10525222 -61628660 - MER5B DNA MER1_type 0 178 1 2071 114 46 32 chr20 10525667 10526036 -61627846 + THE1C LTR MaLR 1 374 -1 463 245 94 38 chr20 10526946 10527158 -61626724 - MER112 DNA MER1_type -7 253 30 251 274 120 8 chr20 10527268 10527385 -61626497 + MIR3 SINE MIR 43 172 -36 189 0 0 0 chr20 10527535 10527556 -61626326 + (A)n Simple_repeat Simple_repeat 1 21 0 349 236 34 11 chr20 10528085 10528174 -61625708 - L2 LINE L2 -21 3292 3202 511 272 46 41 chr20 10528195 10528238 -61625644 + MER63A DNA MER1_type 8 49 -1639 2535 68 0 0 chr20 10528238 10528547 -61625335 + AluY SINE Alu 1 309 -2 511 272 46 41 chr20 10528547 10528698 -61625184 + MER63A DNA MER1_type 49 203 -7 1899 286 116 18 chr20 10528716 10529643 -61624239 - L2 LINE L2 -168 3145 2070 1137 152 4 8 chr20 10529644 10529888 -61623994 + L1MB3 LINE L1 5641 5932 -251 3374 151 29 43 chr20 10529888 10530537 -61623345 - Tigger1 DNA MER2_type 0 2418 1779 26448 130 11 20 chr20 10530569 10533865 -61620017 - L1PA8A LINE L1 -6 6440 3116 2192 76 0 4 chr20 10533865 10534140 -61619742 - AluY SINE Alu -3 308 35 2148 95 10 17 chr20 10534142 10534438 -61619444 - AluY SINE Alu -17 294 1 26448 130 11 20 chr20 10534438 10537558 -61616324 - L1PA8A LINE L1 -3331 3115 7 11234 125 27 12 chr20 10537558 10539330 -61614552 - Tigger1 DNA MER2_type -619 1799 2 1471 108 47 0 chr20 10539330 10539562 -61614320 + L1MB3 LINE L1 5930 6172 -11 26 0 0 0 chr20 10539562 10539588 -61614294 + AT_rich Low_complexity Low_complexity 1 26 0 353 252 50 25 chr20 10539588 10539707 -61614175 - L2 LINE L2 -1230 2084 1963 189 107 0 0 chr20 10540343 10540371 -61613511 + (TG)n Simple_repeat Simple_repeat 1 28 0 682 212 27 65 chr20 10541330 10541514 -61612368 + MER5B DNA MER1_type 1 177 -1 1939 178 26 18 chr20 10541694 10542081 -61611801 - MLT1B LTR MaLR 0 390 1 520 340 72 0 chr20 10542374 10542583 -61611299 + MIR SINE MIR 8 231 -31 561 99 0 0 chr20 10543355 10543436 -61610446 + (TA)n Simple_repeat Simple_repeat 1 81 0 1242 188 33 112 chr20 10543656 10544050 -61609832 + MLT1A1 LTR MaLR 3 365 0 207 381 59 17 chr20 10544050 10544168 -61609714 + MIR3 SINE MIR 49 171 -37 1219 165 99 29 chr20 10544986 10545228 -61608654 + AluJo SINE Alu 6 264 -48 346 145 246 0 chr20 10545228 10545297 -61608585 + MER103 DNA DNA 8 93 -73 429 316 60 0 chr20 10546104 10546237 -61607645 + MIR SINE MIR 63 203 -59 326 335 78 35 chr20 10548381 10548638 -61605244 - L1ME4a LINE L1 -237 5884 5617 940 280 113 72 chr20 10548642 10549800 -61604082 - L1MC4a LINE L1 -1239 6569 5365 354 242 16 16 chr20 10549802 10549930 -61603952 + (TA)n Simple_repeat Simple_repeat 2 129 0 1593 172 35 38 chr20 10549967 10550333 -61603549 - MLT1A1 LTR MaLR 0 365 1 514 284 41 99 chr20 10550363 10550848 -61603034 - L1MC4a LINE L1 -824 5322 4866 990 299 61 45 chr20 10552236 10552797 -61601085 - L1MC4a LINE L1 -1923 5885 5316 494 337 136 47 chr20 10553013 10553113 -61600769 - L1MC4a LINE L1 -1088 5058 4968 499 271 96 66 chr20 10553113 10553508 -61600374 - MLT1I LTR MaLR -2 407 1 494 337 136 47 chr20 10553508 10554144 -61599738 - L1MC4a LINE L1 -1178 4968 4237 2348 69 0 44 chr20 10554144 10554464 -61599418 + AluY SINE Alu 1 306 -5 494 337 136 47 chr20 10554464 10554559 -61599323 - L1MC4a LINE L1 -1909 4237 4152 747 201 12 35 chr20 10554825 10554994 -61598888 + FRAM SINE Alu 1 165 -1 715 177 0 0 chr20 10555204 10555317 -61598565 + AluJb SINE Alu 136 248 -64 222 359 90 21 chr20 10555802 10555947 -61597935 + MIR3 SINE MIR 33 187 -21 1349 216 102 94 chr20 10556665 10557187 -61596695 - MLT1H LTR MaLR -23 526 1 1297 193 101 26 chr20 10557306 10557653 -61596229 - MER63B DNA MER1_type -63 373 1 246 245 0 0 chr20 10558659 10558712 -61595170 + L1MD3 LINE L1 6517 6569 -1426 22 35 0 0 chr20 10558741 10558770 -61595112 + AT_rich Low_complexity Low_complexity 1 29 0 3105 184 27 32 chr20 10558783 10558956 -61594926 + L1MC3 LINE L1 7060 7232 -553 2646 96 3 0 chr20 10558956 10559310 -61594572 - THE1A LTR MaLR 0 355 1 3105 184 27 32 chr20 10559310 10559830 -61594052 + L1MC3 LINE L1 7232 7750 -35 752 186 60 36 chr20 10559861 10560062 -61593820 + FAM SINE Alu 1 72 0 266 308 19 56 chr20 10560287 10560394 -61593488 + MIR3 SINE MIR 10 112 -96 2229 108 0 0 chr20 10561028 10561354 -61592528 - AluSq SINE Alu 0 326 1 308 162 86 38 chr20 10561390 10561495 -61592387 - L2 LINE L2 -126 3187 3078 1199 258 118 9 chr20 10561623 10562057 -61591825 - L1ME3A LINE L1 -238 5932 5452 39 0 0 0 chr20 10562084 10562123 -61591759 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr20 10562216 10562252 -61591630 + AT_rich Low_complexity Low_complexity 1 36 0 1225 222 109 50 chr20 10562252 10562693 -61591189 + MLT1C LTR MaLR 1 467 0 1107 214 18 14 chr20 10562753 10563028 -61590854 + MER33 DNA MER1_type 48 323 -1 2094 122 7 7 chr20 10563333 10563637 -61590245 + AluSq SINE Alu 1 304 -9 248 282 94 12 chr20 10564195 10564280 -61589602 + MIR SINE MIR 100 191 -71 276 254 130 7 chr20 10564420 10564558 -61589324 + L1ME4a LINE L1 5967 6121 0 21 0 0 0 chr20 10564782 10564803 -61589079 + AT_rich Low_complexity Low_complexity 1 21 0 947 189 68 0 chr20 10566242 10566432 -61587450 + MER3 DNA MER1_type 6 208 -1 312 195 293 0 chr20 10566462 10566544 -61587338 + MER5A DNA MER1_type 49 154 -35 588 309 10 14 chr20 10567026 10567233 -61586649 - LTR16C LTR ERVL -1 490 285 369 0 0 0 chr20 10568521 10568562 -61585320 + (CA)n Simple_repeat Simple_repeat 2 42 0 261 0 0 0 chr20 10568584 10568618 -61585264 + (CA)n Simple_repeat Simple_repeat 1 63 0 261 0 0 0 chr20 10568618 10568647 -61585235 + (CA)n Simple_repeat Simple_repeat 2 30 0 1794 69 0 0 chr20 10568666 10568882 -61585000 - AluY SINE Alu 0 311 96 236 279 38 0 chr20 10568909 10568988 -61584894 + (TA)n Simple_repeat Simple_repeat 1 82 0 496 322 62 9 chr20 10569511 10569722 -61584160 + MLT2F LTR ERVL 196 417 -246 284 288 0 0 chr20 10569704 10569770 -61584112 + MLT2E LTR ERVL 202 267 -361 * 254 264 46 0 chr20 10569825 10569912 -61583970 + MLT2E LTR ERVL 519 609 -19 29 70 0 0 chr20 10570160 10570217 -61583665 + AT_rich Low_complexity Low_complexity 1 57 0 23 68 0 0 chr20 10570240 10570284 -61583598 + AT_rich Low_complexity Low_complexity 1 44 0 1994 179 6 8 chr20 10570980 10571343 -61582539 + MER47A DNA MER2_type 4 365 -1 226 301 55 0 chr20 10571707 10571780 -61582102 + MIR SINE MIR 118 194 -68 1230 206 41 4 chr20 10571989 10572232 -61581650 - L1PA16 LINE L1 -23 6143 5892 493 232 58 0 chr20 10573110 10573248 -61580634 - MER103 DNA DNA -13 153 8 541 268 159 19 chr20 10573332 10573489 -61580393 + MER5A DNA MER1_type 9 187 -2 302 214 22 0 chr20 10574085 10574174 -61579708 + L1MA10 LINE L1 6230 6320 -14 698 295 69 9 chr20 10574387 10574621 -61579261 + MIR SINE MIR 2 252 -10 405 268 56 56 chr20 10574682 10574861 -61579021 + L2 LINE L2 3103 3281 -32 23 0 0 0 chr20 10675529 10675552 -61478330 + AT_rich Low_complexity Low_complexity 1 23 0 1299 55 88 6 chr20 10675937 10676118 -61477764 - MER30 DNA MER1_type -34 196 1 391 233 0 0 chr20 10679150 10679236 -61474646 + MER33 DNA MER1_type 1 86 -238 2103 129 0 23 chr20 10679250 10679559 -61474323 + AluSx SINE Alu 1 302 -10 783 216 57 23 chr20 10679610 10679786 -61474096 - MER58A DNA MER1_type -42 182 1 682 159 0 32 chr20 10680098 10680224 -61473658 + FLAM_A SINE Alu 1 122 -11 745 154 0 39 chr20 10680527 10680657 -61473225 - FLAM_C SINE Alu -8 125 1 755 181 0 0 chr20 10680735 10680879 -61473003 + FLAM_A SINE Alu 1 144 0 263 240 103 34 chr20 10680892 10681067 -61472815 - HAL1 LINE L1 -78 2429 2243 696 181 0 0 chr20 10681160 10681276 -61472606 + FRAM SINE Alu 51 166 -10 801 248 27 19 chr20 10681276 10681534 -61472348 - HAL1 LINE L1 -394 2113 1854 1421 170 116 59 chr20 10681535 10681996 -61471886 + LTR48B LTR ERV1 2 561 -146 758 180 0 8 chr20 10681996 10682118 -61471764 - FLAM_A SINE Alu -12 121 1 1421 170 116 59 chr20 10682118 10682274 -61471608 + LTR48B LTR ERV1 561 707 0 1704 247 92 24 chr20 10682332 10683072 -61470810 - HAL1 LINE L1 -735 1772 983 1191 154 0 40 chr20 10683072 10683273 -61470609 + AluJb SINE Alu 103 295 -17 327 231 100 25 chr20 10683961 10684247 -61469635 + L1M4 LINE L1 1102 1775 -4354 408 292 121 53 chr20 10684327 10684783 -61469099 + MLT1H1 LTR MaLR 69 555 0 341 294 44 0 chr20 10684784 10684976 -61468906 + L1MEc LINE L1 1537 1720 -856 6199 96 20 3 chr20 10685635 10686699 -61467183 + L1PA11 LINE L1 5096 6174 0 857 165 0 0 chr20 10687078 10687211 -61466671 + FLAM_C SINE Alu 1 133 0 6152 207 47 19 chr20 10687218 10688415 -61465467 + L1M4 LINE L1 3495 4657 -1504 2354 92 0 19 chr20 10688415 10688731 -61465151 + AluSg SINE Alu 1 310 0 6152 207 47 19 chr20 10688731 10688769 -61465113 + L1M4 LINE L1 4657 4692 -1469 2167 137 26 0 chr20 10688769 10689120 -61464762 - MER46B DNA MER2_type 0 236 2 6152 207 47 19 chr20 10689120 10689145 -61464737 + L1M4 LINE L1 4692 4715 -1446 2033 127 0 3 chr20 10689145 10689476 -61464406 + AluSx SINE Alu 1 330 0 6152 207 47 19 chr20 10689476 10690467 -61463415 + L1M4 LINE L1 4715 5803 -358 1665 267 115 8 chr20 10690490 10691229 -61462653 + HAL1 LINE L1 404 1221 -1286 925 260 184 27 chr20 10691253 10691722 -61462160 + HAL1 LINE L1 1380 1774 -733 234 0 0 0 chr20 10691722 10691748 -61462134 + (CA)n Simple_repeat Simple_repeat 2 27 0 925 260 184 27 chr20 10691748 10692013 -61461869 + HAL1 LINE L1 1774 2229 -278 1548 163 0 101 chr20 10692152 10692374 -61461508 - AluJb SINE Alu 0 312 148 2394 91 7 0 chr20 10692374 10692672 -61461210 - AluSq SINE Alu -13 300 1 1548 163 0 101 chr20 10692672 10692807 -61461075 - AluJb SINE Alu -164 148 1 1121 169 86 36 chr20 10692961 10693066 -61460816 - MER33 DNA MER1_type -2269 316 218 2225 116 0 3 chr20 10693066 10693369 -61460513 - AluSg SINE Alu -8 302 1 1121 169 86 36 chr20 10693369 10693564 -61460318 - MER33 DNA MER1_type -2367 218 1 2133 124 3 0 chr20 10693596 10693894 -61459988 + AluSx SINE Alu 1 299 -13 236 298 149 7 chr20 10693898 10694005 -61459877 + MIR SINE MIR 102 235 -27 2445 47 0 3 chr20 10694005 10694302 -61459580 + AluY SINE Alu 2 297 -14 236 298 149 7 chr20 10694302 10694335 -61459547 + MIR SINE MIR 235 262 0 22 0 0 0 chr20 10695224 10695246 -61458636 + AT_rich Low_complexity Low_complexity 1 22 0 387 241 188 18 chr20 10696786 10697051 -61456831 + L1MD2 LINE L1 3587 3806 -2340 1897 137 16 22 chr20 10697051 10697365 -61456517 + AluJo SINE Alu 1 312 0 387 241 188 18 chr20 10697365 10697493 -61456389 + L1MD2 LINE L1 3806 4047 -2099 316 167 73 52 chr20 10697515 10697611 -61456271 + L1MD2 LINE L1 4349 4446 -1700 2774 189 97 20 chr20 10697886 10698623 -61455259 + L1MD2 LINE L1 4883 5719 -640 2269 116 0 0 chr20 10698623 10698924 -61454958 - AluSg SINE Alu -9 301 1 2774 189 97 20 chr20 10698924 10699104 -61454778 + L1MD2 LINE L1 5719 5884 -475 2251 107 0 3 chr20 10699130 10699428 -61454454 + AluSx SINE Alu 1 297 -15 2370 96 6 3 chr20 10699441 10699753 -61454129 + AluSq SINE Alu 1 313 0 1757 199 11 30 chr20 10700148 10700380 -61453502 + MLT1A1 LTR MaLR 1 225 -140 2374 93 0 0 chr20 10700380 10700681 -61453201 + AluSg SINE Alu 1 301 -9 1757 199 11 30 chr20 10700681 10700820 -61453062 + MLT1A1 LTR MaLR 225 365 0 2093 130 138 5 chr20 10700998 10701376 -61452506 - MSTA LTR MaLR 0 428 1 235 321 123 37 chr20 10701445 10701713 -61452169 + L2 LINE L2 2887 3177 -95 210 37 0 0 chr20 10701810 10701837 -61452045 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 655 142 0 8 chr20 10703597 10703818 -61450064 - AluJb SINE Alu -8 304 1 736 192 24 0 chr20 10704047 10704172 -61449710 - FLAM_C SINE Alu -5 128 1 947 223 99 0 chr20 10704654 10704927 -61448955 + MER46C DNA MER2_type 5 304 -34 196 298 0 0 chr20 10704988 10705045 -61448837 + L3b LINE CR1 1350 1406 -177 2222 104 7 0 chr20 10705289 10705586 -61448296 - AluSp SINE Alu -14 299 1 290 279 193 0 chr20 10705781 10705916 -61447966 - MER5A DNA MER1_type 0 189 28 450 212 212 13 chr20 10705916 10706067 -61447815 - MER5A DNA MER1_type 0 189 9 37 0 0 0 chr20 10706116 10706153 -61447729 + AT_rich Low_complexity Low_complexity 1 37 0 980 175 0 0 chr20 10706451 10706611 -61447271 + FRAM SINE Alu 1 157 -19 482 126 39 48 chr20 10707147 10707230 -61446652 - MER53 DNA DNA 0 189 106 3250 158 40 21 chr20 10707230 10707862 -61446020 - LTR48B LTR ERV1 0 644 1 482 126 39 48 chr20 10707862 10707881 -61446001 - MER53 DNA DNA -83 106 88 185 387 0 13 chr20 10708101 10708176 -61445706 + MIR SINE MIR 23 96 -112 532 176 11 94 chr20 10708192 10708381 -61445501 - MER104 DNA Tc2 -5 175 2 366 326 15 0 chr20 10708725 10708857 -61445025 + (TCCA)n Simple_repeat Simple_repeat 1 134 0 1752 181 64 24 chr20 10709059 10709595 -61444287 + MER39 LTR ERV1 2 689 -18 6270 34 0 0 chr20 10709610 10710352 -61443530 - L1PA3 LINE L1 0 6155 5414 2333 269 93 38 chr20 10710527 10710850 -61443032 - L2 LINE L2 -145 3168 2864 2044 103 0 0 chr20 10710850 10711111 -61442771 + AluY SINE Alu 35 295 -16 2333 269 93 38 chr20 10711111 10711770 -61442112 - L2 LINE L2 -449 2864 2127 2015 257 53 51 chr20 10712110 10712179 -61441703 - MER21B LTR ERV1 -109 754 687 2512 145 5 2 chr20 10712179 10712580 -61441302 + MER57A LTR ERV1 2 403 0 2015 257 53 51 chr20 10712580 10712799 -61441083 - MER21B LTR ERV1 -176 687 470 2361 98 0 7 chr20 10712799 10713104 -61440778 + AluSg SINE Alu 1 303 -7 2015 257 53 51 chr20 10713104 10713564 -61440318 - MER21B LTR ERV1 -393 470 3 748 243 102 26 chr20 10713567 10713944 -61439938 + MLT1G3 LTR MaLR 1 401 -189 1734 168 7 26 chr20 10714032 10714342 -61439540 + AluJb SINE Alu 3 306 -6 348 317 10 0 chr20 10714512 10714616 -61439266 + MIR SINE MIR 48 152 -56 2215 117 7 0 chr20 10715544 10715844 -61438038 - AluSx SINE Alu -10 302 1 183 156 0 0 chr20 10716034 10716066 -61437816 + (TA)n Simple_repeat Simple_repeat 1 32 0 2308 233 75 42 chr20 10716156 10717146 -61436736 + L1ME3A LINE L1 5130 6159 -11 488 262 147 28 chr20 10717779 10717954 -61435928 - L1MC5 LINE L1 -54 7907 7754 306 0 0 0 chr20 10717954 10717988 -61435894 + (CA)n Simple_repeat Simple_repeat 2 35 0 488 262 147 28 chr20 10717988 10718201 -61435681 - L1MC5 LINE L1 -207 7754 7473 1901 107 50 11 chr20 10718235 10718516 -61435366 + AluSx SINE Alu 1 292 -20 768 280 60 4 chr20 10718692 10718908 -61434974 - MIR SINE MIR -10 252 21 1945 164 0 0 chr20 10718908 10719212 -61434670 - AluJo SINE Alu -8 304 1 768 280 60 4 chr20 10719212 10719227 -61434655 - MIR SINE MIR -241 21 8 2241 129 0 0 chr20 10719760 10720063 -61433819 + AluSx SINE Alu 1 303 -9 2707 105 3 0 chr20 10720613 10720976 -61432906 - THE1B LTR MaLR 0 364 1 289 209 157 17 chr20 10721248 10721363 -61432519 - L1ME4a LINE L1 0 6121 5991 1942 158 17 0 chr20 10722310 10722608 -61431274 - AluSx SINE Alu -9 303 1 273 119 0 0 chr20 10725715 10725757 -61428125 + (A)n Simple_repeat Simple_repeat 1 42 0 2859 116 113 0 chr20 10725761 10726211 -61427671 + MER61D LTR ERV1 1 501 0 244 167 17 50 chr20 10726257 10726317 -61427565 + L1M4 LINE L1 4105 4162 -1984 643 280 0 7 chr20 10726327 10726477 -61427405 + FRAM SINE Alu 4 152 -14 293 253 102 45 chr20 10726481 10726746 -61427136 + L1M4 LINE L1 4378 4657 -1489 287 242 30 0 chr20 10726746 10726812 -61427070 + L2 LINE L2 3246 3313 0 504 298 145 70 chr20 10726825 10726842 -61427040 + L2 LINE L2 2203 2217 -1055 2108 137 58 65 chr20 10726842 10726905 -61426977 - MSTB1 LTR MaLR -4 428 366 2250 111 3 9 chr20 10726905 10727220 -61426662 + AluSq SINE Alu 1 313 0 2108 137 58 65 chr20 10727220 10727233 -61426649 - MSTB1 LTR MaLR -66 366 354 2342 96 0 10 chr20 10727233 10727545 -61426337 + AluSc SINE Alu 1 309 0 2108 137 58 65 chr20 10727545 10727898 -61425984 - MSTB1 LTR MaLR -78 354 1 504 298 145 70 chr20 10727898 10728132 -61425750 + L2 LINE L2 2217 2432 -840 1638 179 33 0 chr20 10728132 10728434 -61425448 - AluJo SINE Alu 0 312 1 504 298 145 70 chr20 10728434 10728657 -61425225 + L2 LINE L2 2432 2637 -635 798 161 32 0 chr20 10728657 10728781 -61425101 + FLAM_C SINE Alu 1 128 -5 504 298 145 70 chr20 10728781 10729037 -61424845 + L2 LINE L2 2637 3000 -272 1654 192 65 0 chr20 10729100 10729392 -61424490 + AluSx SINE Alu 1 311 -1 181 171 229 133 chr20 10729491 10729519 -61424363 + L2 LINE L2 3199 3223 -90 2599 58 0 3 chr20 10729519 10729830 -61424052 - AluY SINE Alu -1 310 1 181 171 229 133 chr20 10729830 10729906 -61423976 + L2 LINE L2 3223 3313 0 572 131 0 0 chr20 10729987 10730071 -61423811 - AluJ/FRAM SINE Alu -13 299 216 215 196 143 0 chr20 10731191 10731247 -61422635 - MIR SINE MIR -12 250 187 360 0 0 0 chr20 10731325 10731365 -61422517 + (TTA)n Simple_repeat Simple_repeat 2 41 0 10244 37 7 103 chr20 10731380 10732914 -61420968 - SVA Other Other 0 1386 1 374 311 80 22 chr20 10733340 10733989 -61419893 + L1M4 LINE L1 4371 5057 -1089 481 328 103 27 chr20 10734165 10734573 -61419309 + L1M4 LINE L1 5257 5695 -483 538 263 26 13 chr20 10734667 10734823 -61419059 - LTR16A1 LTR ERVL -299 158 1 1930 174 3 0 chr20 10735071 10735376 -61418506 - AluSx SINE Alu -6 306 1 909 152 9 3 chr20 10735645 10735876 -61418006 - MER2 DNA MER2_type 0 345 59 1144 213 117 46 chr20 10735982 10736418 -61417464 + MLT1C LTR MaLR 1 467 0 469 260 83 71 chr20 10736990 10737208 -61416674 + L1ME4a LINE L1 5612 5839 -282 723 103 0 0 chr20 10737208 10737315 -61416567 + L1MA3 LINE L1 6198 6304 -1 469 260 83 71 chr20 10737315 10737519 -61416363 + L1ME4a LINE L1 5839 6039 -82 183 42 0 0 chr20 10737520 10737544 -61416338 + (TG)n Simple_repeat Simple_repeat 2 25 0 29 0 0 0 chr20 10737586 10737615 -61416267 + AT_rich Low_complexity Low_complexity 1 29 0 2495 71 6 0 chr20 10737618 10737929 -61415953 + AluSp SINE Alu 1 313 0 1290 232 125 27 chr20 10739964 10740466 -61413416 - MLT1F1 LTR MaLR -2 565 1 330 201 49 183 chr20 10740466 10740690 -61413192 - MLT1F1-int LTR MaLR -41 1330 1137 355 178 133 11 chr20 10740780 10740870 -61413012 - MLT1E LTR MaLR -492 101 1 1266 158 29 5 chr20 10741412 10741621 -61412261 + MER20 DNA MER1_type 4 217 -2 23 0 0 0 chr20 10742109 10742132 -61411750 + AT_rich Low_complexity Low_complexity 1 23 0 2046 141 39 0 chr20 10743388 10743722 -61410160 + MER7A DNA MER2_type 2 346 0 22 94 0 0 chr20 10744145 10744209 -61409673 + AT_rich Low_complexity Low_complexity 1 64 0 303 152 0 15 chr20 10744545 10744611 -61409271 + L1PA13 LINE L1 6096 6160 -3 2425 82 6 22 chr20 10746776 10747091 -61406791 + AluSx SINE Alu 1 310 -2 231 275 92 69 chr20 10747266 10747397 -61406485 + MIR SINE MIR 35 168 -94 2136 113 14 3 chr20 10747434 10747727 -61406155 + AluSx SINE Alu 1 296 -16 2211 87 17 7 chr20 10748080 10748369 -61405513 - AluSc SINE Alu -17 292 1 664 194 40 0 chr20 10748370 10748494 -61405388 - FLAM_A SINE Alu -4 129 1 226 250 59 15 chr20 10749025 10749093 -61404789 - L2 LINE L2 -8 3264 3194 2295 97 3 0 chr20 10751351 10751649 -61402233 - AluSp SINE Alu -13 300 2 793 226 78 94 chr20 10753366 10753856 -61400026 + L1MC5 LINE L1 6725 7206 -755 1020 237 9 9 chr20 10753867 10754086 -61399796 + MER58A DNA MER1_type 5 223 -1 1458 115 28 14 chr20 10754133 10754351 -61399531 + AluSg/x SINE Alu 80 300 -10 1616 186 4 0 chr20 10754414 10754688 -61399194 + AluJo SINE Alu 1 275 -37 308 113 0 81 chr20 10754688 10754750 -61399132 + AluJo/FRAM SINE Alu 201 257 -45 378 289 145 38 chr20 10754837 10755367 -61398515 + L1MC5 LINE L1 7268 7854 -107 478 255 19 66 chr20 10756346 10756558 -61397324 - MER46C DNA MER2_type 0 338 137 902 116 0 20 chr20 10756568 10756714 -61397168 - Tigger7 DNA MER2_type -6 2581 2439 * 1595 193 72 0 chr20 10756709 10757030 -61396852 - Tigger7 DNA MER2_type -389 344 1 488 202 101 8 chr20 10757031 10757150 -61396732 - MER46C DNA MER2_type -207 131 2 35 0 0 0 chr20 10758196 10758231 -61395651 + AT_rich Low_complexity Low_complexity 1 35 0 1961 139 45 0 chr20 10758233 10758521 -61395361 + AluSx SINE Alu 1 301 -11 32 0 0 0 chr20 10758856 10758888 -61394994 + AT_rich Low_complexity Low_complexity 1 32 0 2525 61 0 0 chr20 10759799 10760096 -61393786 - AluY SINE Alu -14 297 1 1304 200 76 17 chr20 10760240 10760530 -61393352 + AluJb SINE Alu 1 307 -5 29 46 0 31 chr20 10761313 10761359 -61392523 + AT_rich Low_complexity Low_complexity 1 46 -17 720 174 8 30 chr20 10761359 10761491 -61392391 + FLAM_C SINE Alu 1 129 -4 29 46 0 31 chr20 10761491 10761509 -61392373 + AT_rich Low_complexity Low_complexity 46 63 0 2460 84 0 3 chr20 10761855 10762165 -61391717 + AluSq SINE Alu 1 309 -4 1840 129 35 3 chr20 10763494 10763780 -61390102 - AluSx SINE Alu -13 299 5 459 0 0 0 chr20 10764115 10764166 -61389716 + (CA)n Simple_repeat Simple_repeat 2 52 0 1938 132 3 21 chr20 10765642 10765951 -61387931 + AluSx SINE Alu 1 304 0 288 360 130 24 chr20 10766379 10766873 -61387009 + L2 LINE L2 2063 2644 -670 936 205 27 5 chr20 10766873 10767058 -61386824 + MER5A DNA MER1_type 1 189 0 288 360 130 24 chr20 10767058 10767219 -61386663 + L2 LINE L2 2644 2787 -527 656 270 149 18 chr20 10767318 10767540 -61386342 + MIR SINE MIR 12 262 0 364 261 236 6 chr20 10768051 10768212 -61385670 + MIR SINE MIR 65 262 0 405 0 0 0 chr20 10768613 10768658 -61385224 + (CAAAC)n Simple_repeat Simple_repeat 2 46 0 354 259 77 14 chr20 10768910 10769053 -61384829 + L2 LINE L2 2982 3133 -180 1241 251 101 7 chr20 10769058 10769464 -61384418 + LTR16A LTR ERVL 1 444 -6 1558 145 29 71 chr20 10769501 10769596 -61384286 + MER2 DNA MER2_type 1 99 -246 2040 92 30 20 chr20 10769596 10769901 -61383981 + AluSx SINE Alu 1 308 -4 1558 145 29 71 chr20 10769901 10770091 -61383791 + MER2 DNA MER2_type 99 271 -74 1816 131 20 7 chr20 10770091 10770389 -61383493 - AluSx SINE Alu -10 302 1 1558 145 29 71 chr20 10770389 10770453 -61383429 + MER2 DNA MER2_type 271 336 -9 313 306 91 88 chr20 10770925 10771343 -61382539 + L1M2 LINE L1 276 694 -6155 279 250 183 10 chr20 10772917 10773021 -61380861 - L2 LINE L2 0 3313 3192 26 30 0 0 chr20 10773122 10773155 -61380727 + AT_rich Low_complexity Low_complexity 1 33 0 402 240 19 0 chr20 10773268 10773372 -61380510 + MER5A DNA MER1_type 4 109 -80 2193 96 7 0 chr20 10773438 10773740 -61380142 - AluSx SINE Alu -8 304 1 847 240 5 0 chr20 10774199 10774391 -61379491 - AluJo SINE Alu 0 312 120 295 210 74 25 chr20 10774408 10774489 -61379393 - MER5B DNA MER1_type 0 178 94 192 299 39 13 chr20 10774678 10774755 -61379127 + MIR SINE MIR 68 146 -116 827 270 117 4 chr20 10774908 10775138 -61378744 + MIR SINE MIR 2 257 -5 613 148 106 0 chr20 10775325 10775339 -61378543 - L1MA10 LINE L1 -3 6331 6318 499 196 134 46 chr20 10775339 10775533 -61378349 - L1ME2 LINE L1 -9 6155 5945 1992 131 40 14 chr20 10775558 10775855 -61378027 - AluSx SINE Alu -7 305 1 736 149 35 21 chr20 10775950 10776091 -61377791 - FLAM_C SINE Alu 0 143 1 542 231 0 7 chr20 10776093 10776240 -61377642 - L1ME2 LINE L1 -298 5868 5723 1784 167 20 3 chr20 10776295 10776595 -61377287 - AluJb SINE Alu -7 305 1 2141 140 0 10 chr20 10777258 10777572 -61376310 + AluSx SINE Alu 1 311 -1 376 264 65 69 chr20 10777585 10777801 -61376081 - L1ME1 LINE L1 -17 6149 5935 506 294 92 43 chr20 10777967 10778173 -61375709 - MIR SINE MIR -17 245 48 1269 152 0 5 chr20 10778238 10778429 -61375453 + AluJo SINE Alu 1 190 -122 315 299 9 28 chr20 10778440 10778547 -61375335 - L2 LINE L2 0 3313 3209 264 397 64 19 chr20 10779252 10779408 -61374474 + L2 LINE L2 3107 3269 -3 433 259 63 60 chr20 10780554 10780746 -61373136 + MIR SINE MIR 24 213 -49 199 262 0 0 chr20 10781653 10781695 -61372187 - L2 LINE L2 -18 3295 3254 992 149 58 0 chr20 10782490 10782664 -61371218 + MER5A DNA MER1_type 6 189 0 1372 159 0 0 chr20 10783713 10783921 -61369961 + MER46A DNA MER2_type 28 235 -1 247 308 42 42 chr20 10784042 10784162 -61369720 - MLT1K LTR MaLR -91 497 378 553 262 198 16 chr20 10784620 10784872 -61369010 - L2 LINE L2 -4 3309 3012 21 0 0 0 chr20 10786188 10786209 -61367673 + AT_rich Low_complexity Low_complexity 1 21 0 260 294 43 80 chr20 10786225 10786389 -61367493 - MIR SINE MIR -27 181 16 229 271 19 65 chr20 10786485 10786592 -61367290 + MER102a DNA MER1_type 221 322 -8 1289 173 19 71 chr20 10786805 10786886 -61366996 - Charlie4a DNA MER1_type -1469 492 408 273 29 0 0 chr20 10786886 10786920 -61366962 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1512 178 6 116 chr20 10786929 10787266 -61366616 + AluJo SINE Alu 2 301 -1 1289 173 19 71 chr20 10787266 10787498 -61366384 - Charlie4a DNA MER1_type -1561 400 186 442 250 194 77 chr20 10787609 10788001 -61365881 - MLT1H LTR MaLR -5 544 107 354 23 0 0 chr20 10788966 10789009 -61364873 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1107 268 80 48 chr20 10789036 10789510 -61364372 - LTR16C LTR ERVL 0 491 3 635 308 72 0 chr20 10789622 10789843 -61364039 - MIR SINE MIR -12 250 14 2111 104 18 0 chr20 10790640 10790950 -61362932 + AluSx SINE Alu 1 315 0 201 225 135 22 chr20 10791340 10791429 -61362453 - L2 LINE L2 -163 3150 3052 361 299 22 15 chr20 10791589 10791723 -61362159 - MIR SINE MIR -36 226 92 2030 238 65 48 chr20 10791926 10792556 -61361326 - MLT1E1 LTR MaLR 0 654 14 646 325 130 12 chr20 10793395 10793943 -61359939 - L2 LINE L2 -7 3306 2686 828 239 66 66 chr20 10794179 10794573 -61359309 - LTR16A1 LTR ERVL -63 394 1 517 217 9 9 chr20 10795118 10795224 -61358658 + MER5B DNA MER1_type 1 106 -72 2768 216 46 27 chr20 10795226 10795857 -61358025 - L1MD3 LINE L1 0 7995 7353 414 269 120 42 chr20 10795986 10796202 -61357680 + MIR SINE MIR 28 260 -2 1061 260 29 4 chr20 10796374 10796620 -61357262 - MIR SINE MIR -10 252 1 2322 115 0 0 chr20 10796731 10797043 -61356839 - AluSx SINE Alu 0 312 1 229 313 38 0 chr20 10798251 10798331 -61355551 + (CGTG)n Simple_repeat Simple_repeat 3 85 0 226 175 25 0 chr20 10798841 10798881 -61355001 - MIR SINE MIR -9 253 213 183 295 116 11 chr20 10798917 10799012 -61354870 + MIR3 SINE MIR 85 189 -19 624 211 22 56 chr20 10799812 10800084 -61353798 - MLT1H LTR MaLR -4 590 230 309 185 87 0 chr20 10800357 10800449 -61353433 - L1ME4a LINE L1 -1 6120 6021 21 36 0 0 chr20 10800460 10800488 -61353394 + AT_rich Low_complexity Low_complexity 1 28 0 714 231 140 32 chr20 10800541 10800762 -61353120 - MIR SINE MIR -12 250 6 779 251 50 0 chr20 10800773 10800952 -61352930 - MER5A DNA MER1_type 0 189 2 307 276 48 9 chr20 10800956 10801061 -61352821 - MIR SINE MIR -82 180 72 652 207 64 7 chr20 10801651 10801791 -61352091 + MER5A DNA MER1_type 14 161 -28 907 218 11 0 chr20 10801911 10802085 -61351797 - MER5A DNA MER1_type -6 183 8 2272 137 39 0 chr20 10802737 10803072 -61350810 + MER7A DNA MER2_type 1 346 0 799 255 42 8 chr20 10804164 10804423 -61349459 - LTR37B LTR ERV1 -3 465 198 580 235 31 56 chr20 10804467 10804517 -61349365 - LTR37B LTR ERV1 -272 196 146 614 209 33 0 chr20 10804517 10804670 -61349212 + L1MA10 LINE L1 6177 6334 0 580 235 31 56 chr20 10804670 10804815 -61349067 - LTR37B LTR ERV1 -322 146 6 629 247 16 47 chr20 10804863 10805053 -61348829 + MIR SINE MIR 69 252 -10 704 246 27 16 chr20 10805382 10805565 -61348317 + MIR SINE MIR 42 226 -36 710 291 65 12 chr20 10806216 10806524 -61347358 + LTR16A1 LTR ERVL 153 455 -2 189 74 0 0 chr20 10807459 10807486 -61346396 + (CA)n Simple_repeat Simple_repeat 2 28 0 642 246 62 124 chr20 10808564 10809016 -61344866 + L1ME4a LINE L1 5543 5966 -155 819 190 29 23 chr20 10809028 10809202 -61344680 - MER5B DNA MER1_type 0 178 4 2144 121 0 38 chr20 10809303 10809446 -61344436 + AluSx SINE Alu 3 150 -162 2394 70 17 0 chr20 10809446 10809747 -61344135 + AluSp SINE Alu 1 306 -7 2144 121 0 38 chr20 10809747 10809917 -61343965 + AluSx SINE Alu 150 304 -8 1500 167 124 70 chr20 10809987 10810413 -61343469 + LTR37B LTR ERV1 6 454 -14 1774 185 7 0 chr20 10811541 10811849 -61342033 - AluJo SINE Alu -2 310 1 359 303 124 22 chr20 10811917 10812102 -61341780 - L3 LINE CR1 -1 1576 1373 440 225 8 67 chr20 10812476 10812596 -61341286 + MER5A DNA MER1_type 2 114 -75 444 19 0 0 chr20 10812701 10812754 -61341128 + (CA)n Simple_repeat Simple_repeat 2 54 0 272 287 89 0 chr20 10813140 10813241 -61340641 - L3 LINE CR1 -335 1242 1133 197 266 174 37 chr20 10814353 10814462 -61339420 + MIR3 SINE MIR 82 205 -3 930 227 22 64 chr20 10814630 10814943 -61338939 - LTR16A1 LTR ERVL 0 457 158 2555 58 0 3 chr20 10815022 10815331 -61338551 - AluY SINE Alu -3 308 1 216 197 105 53 chr20 10815797 10815873 -61338009 + L2 LINE L2 3192 3271 -1 238 243 97 19 chr20 10816786 10816889 -61336993 - MER5A DNA MER1_type -24 165 55 196 286 124 57 chr20 10816807 10816912 -61336970 + MER5A DNA MER1_type 56 167 -22 * 643 62 0 0 chr20 10816931 10817011 -61336871 - Alu SINE Alu -9 300 221 363 200 200 0 chr20 10817890 10817975 -61335907 - MER5A DNA MER1_type -84 105 4 544 320 88 41 chr20 10818698 10819404 -61334478 + L1M4 LINE L1 2401 3139 -3007 2099 101 4 0 chr20 10819553 10819862 -61334020 - AluSc SINE Alu 0 310 1 359 289 27 27 chr20 10819996 10820145 -61333737 + MIR SINE MIR 113 261 -1 1894 132 30 7 chr20 10821141 10821437 -61332445 + AluSx SINE Alu 1 303 -9 1607 189 68 12 chr20 10821612 10821934 -61331948 - MER58B DNA MER1_type -1 340 1 2333 89 3 3 chr20 10821984 10822288 -61331594 + AluSp SINE Alu 1 304 -9 689 245 15 51 chr20 10822355 10822429 -61331453 + MER5A DNA MER1_type 1 76 -113 2197 118 3 3 chr20 10822429 10822735 -61331147 + AluSx SINE Alu 1 306 -6 689 245 15 51 chr20 10822735 10822856 -61331026 + MER5A DNA MER1_type 76 189 0 209 278 0 56 chr20 10822923 10822995 -61330887 - L2 LINE L2 -1 3271 3204 284 48 24 0 chr20 10823730 10823772 -61330110 + (GA)n Simple_repeat Simple_repeat 1 43 0 386 308 107 0 chr20 10824260 10824419 -61329463 - MIR SINE MIR -73 189 14 334 308 72 14 chr20 10825383 10825548 -61328334 - MLT1J1 LTR MaLR -2 444 276 647 216 40 0 chr20 10826035 10826160 -61327722 + L2 LINE L2 3141 3270 -2 1269 230 8 59 chr20 10826386 10826574 -61327308 + L1ME2 LINE L1 5789 5948 -216 2580 60 0 0 chr20 10826574 10826875 -61327007 + AluY SINE Alu 1 301 -10 1269 230 8 59 chr20 10826875 10827073 -61326809 + L1ME2 LINE L1 5948 6155 -9 405 0 0 0 chr20 10827082 10827127 -61326755 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 1664 176 47 3 chr20 10827860 10828179 -61325703 - MER63C DNA MER1_type 0 932 600 710 182 8 8 chr20 10828181 10828302 -61325580 + FLAM_A SINE Alu 1 121 -21 3009 178 46 7 chr20 10828317 10828901 -61324981 - MER63C DNA MER1_type -323 607 1 25 0 0 0 chr20 10833085 10833110 -61320772 + AT_rich Low_complexity Low_complexity 1 25 0 506 309 13 7 chr20 10833540 10833689 -61320193 - MIR SINE MIR -105 157 8 282 236 88 59 chr20 10833875 10834049 -61319833 - MIR SINE MIR -60 148 10 875 49 0 16 chr20 10834146 10834268 -61319614 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 324 341 58 7 chr20 10834324 10834462 -61319420 - MIR3 SINE MIR -62 146 2 411 213 75 0 chr20 10834957 10835051 -61318831 + MER5A DNA MER1_type 9 109 -80 589 295 35 46 chr20 10835193 10835451 -61318431 - MIR SINE MIR -11 251 1 470 313 89 38 chr20 10837851 10838222 -61315660 + L1ME LINE L1 5429 5818 -303 466 332 8 10 chr20 10838305 10838659 -61315223 - LTR16B LTR ERVL -12 452 59 8258 25 0 0 chr20 10839076 10840182 -61313700 + L1PA3 LINE L1 5046 6152 -3 29 0 0 0 chr20 10840182 10840211 -61313671 + AT_rich Low_complexity Low_complexity 1 29 0 233 116 0 47 chr20 10841603 10841646 -61312236 - MER3 DNA MER1_type -18 191 151 21 0 0 0 chr20 10843067 10843088 -61310794 + AT_rich Low_complexity Low_complexity 1 21 0 2123 115 7 14 chr20 10843092 10843388 -61310494 - AluSq SINE Alu -19 294 1 198 103 0 0 chr20 10845050 10845079 -61308803 + (T)n Simple_repeat Simple_repeat 1 29 0 501 276 190 21 chr20 10849085 10849469 -61304413 - MLT1H LTR MaLR 0 549 101 * 1272 265 137 7 chr20 10849459 10849896 -61303986 - LTR33 LTR ERVL -18 503 10 677 232 22 61 chr20 10850079 10850260 -61303622 + MER5B DNA MER1_type 5 178 0 286 330 47 98 chr20 10851622 10851940 -61301942 - L2 LINE L2 -5 3267 2966 289 99 62 0 chr20 10853851 10853932 -61299950 + (TA)n Simple_repeat Simple_repeat 1 86 0 919 142 0 37 chr20 10854111 10854273 -61299609 + FRAM SINE Alu 20 175 -1 225 257 43 29 chr20 10854356 10854426 -61299456 + MIR SINE MIR 21 91 -171 226 266 16 0 chr20 10856044 10856108 -61297774 - MIR SINE MIR -16 246 182 428 327 37 25 chr20 10856120 10856282 -61297600 + MIR SINE MIR 6 169 -93 1430 131 89 0 chr20 10856333 10856569 -61297313 - Tigger2 DNA MER2_type 0 2718 2462 3924 154 48 14 chr20 10856639 10857272 -61296610 - Tigger2 DNA MER2_type -2006 712 53 1852 185 0 0 chr20 10857272 10857574 -61296308 + AluJo SINE Alu 1 302 -10 3924 154 48 14 chr20 10857574 10857629 -61296253 - Tigger2 DNA MER2_type -2665 53 1 21 36 0 0 chr20 10857872 10857900 -61295982 + AT_rich Low_complexity Low_complexity 1 28 0 197 65 32 0 chr20 10858831 10858862 -61295020 + (CAA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr20 10859278 10859299 -61294583 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 10859402 10859424 -61294458 + AT_rich Low_complexity Low_complexity 1 22 0 2247 173 77 26 chr20 10859845 10860270 -61293612 - L1MB7 LINE L1 0 6184 5727 2067 105 3 68 chr20 10860270 10860593 -61293289 - AluSx SINE Alu -10 302 1 2247 173 77 26 chr20 10860593 10860675 -61293207 - L1MB7 LINE L1 -457 5727 5651 243 224 0 0 chr20 10860706 10860782 -61293100 + (CCA)n Simple_repeat Simple_repeat 3 78 0 334 234 0 21 chr20 10860871 10861012 -61292870 + (CCA)n Simple_repeat Simple_repeat 2 139 0 402 297 74 55 chr20 10861941 10862143 -61291739 - MIR SINE MIR -27 235 30 607 269 34 97 chr20 10862296 10862549 -61291333 - L2 LINE L2 0 3313 3083 1653 175 18 105 chr20 10862549 10862948 -61290934 - MLT1A1 LTR MaLR 0 365 2 607 269 34 97 chr20 10862948 10863014 -61290868 - L2 LINE L2 -230 3083 3014 1276 245 31 22 chr20 10863810 10864165 -61289717 + LTR16C LTR ERVL 134 491 0 2066 243 90 2 chr20 10865176 10865678 -61288204 - MLT1H LTR MaLR -3 546 1 267 301 20 59 chr20 10866843 10866996 -61286886 - LTR16C LTR ERVL -14 477 331 207 283 0 0 chr20 10867623 10867669 -61286213 + polypurine Low_complexity Low_complexity 3 48 0 23 33 0 0 chr20 10867733 10867763 -61286119 + AT_rich Low_complexity Low_complexity 1 30 0 1457 130 39 0 chr20 10867998 10868228 -61285654 + AluSq SINE Alu 72 310 -3 2365 246 56 18 chr20 10868823 10868961 -61284921 + L1ME3A LINE L1 5518 5649 -521 1353 234 0 0 chr20 10868961 10869200 -61284682 + MER8 DNA MER2_type 1 239 0 2365 246 56 18 chr20 10869200 10869690 -61284192 + L1ME3A LINE L1 5649 6170 0 1253 255 90 28 chr20 10869871 10870338 -61283544 - LTR33 LTR ERVL 0 521 26 596 286 106 61 chr20 10870982 10871359 -61282523 - LTR16C LTR ERVL -2 489 96 445 348 105 21 chr20 10871652 10872034 -61281848 + L2 LINE L2 1932 2345 -969 598 232 158 29 chr20 10872664 10872910 -61280972 - MLT1H LTR MaLR 0 549 272 2428 192 111 8 chr20 10873248 10873754 -61280128 + MLT1F1 LTR MaLR 4 561 -6 192 191 24 0 chr20 10874815 10874857 -61279025 - L2 LINE L2 -213 3059 3017 1291 235 107 26 chr20 10874939 10875221 -61278661 - MLT1D LTR MaLR -1 504 169 1955 148 10 13 chr20 10875221 10875532 -61278350 - AluSx SINE Alu -2 310 1 1291 235 107 26 chr20 10875532 10875708 -61278174 - MLT1D LTR MaLR -336 169 9 204 355 54 43 chr20 10875784 10875970 -61277912 - L2 LINE L2 -474 2840 2653 1116 221 60 28 chr20 10876328 10876645 -61277237 + LTR16A1 LTR ERVL 128 454 -3 886 199 34 6 chr20 10877110 10877286 -61276596 + MER5A DNA MER1_type 9 189 0 2297 101 0 0 chr20 10877358 10877656 -61276226 + AluY SINE Alu 1 298 -13 328 241 7 0 chr20 10877835 10877932 -61275950 + L1MC/D LINE L1 5731 5828 -299 225 217 60 12 chr20 10878073 10878156 -61275726 + (CATATA)n Simple_repeat Simple_repeat 3 89 0 1782 156 4 4 chr20 10878181 10878444 -61275438 + AluJb SINE Alu 4 266 -46 201 74 0 0 chr20 10878453 10878480 -61275402 + (CA)n Simple_repeat Simple_repeat 2 28 0 726 321 78 35 chr20 10878599 10879077 -61274805 - L2 LINE L2 -26 3287 2831 2114 129 13 0 chr20 10879077 10879379 -61274503 - AluSx SINE Alu -6 306 1 726 321 78 35 chr20 10879379 10879627 -61274255 - L2 LINE L2 -482 2831 2520 2200 123 0 0 chr20 10879627 10879920 -61273962 - AluSx SINE Alu -19 293 1 726 321 78 35 chr20 10879920 10879949 -61273933 - L2 LINE L2 -793 2520 2494 702 274 60 41 chr20 10879975 10880293 -61273589 - MLT1H LTR MaLR -195 354 31 2305 65 3 0 chr20 10880581 10880874 -61273008 - AluY SINE Alu -17 294 1 989 182 32 27 chr20 10882705 10882892 -61270990 + MER5A DNA MER1_type 2 189 0 1862 152 0 10 chr20 10883788 10884077 -61269805 - AluJo SINE Alu -15 297 12 241 287 56 28 chr20 10884099 10884207 -61269675 - MLT1J LTR MaLR 0 511 401 237 200 0 0 chr20 10884265 10884305 -61269577 - MLT1J LTR MaLR -201 310 271 220 347 79 41 chr20 10884365 10884734 -61269148 - L2 LINE L2 -1199 2115 1733 1635 191 126 7 chr20 10885919 10886349 -61267533 + L1M4 LINE L1 4822 5302 -844 2106 143 0 0 chr20 10887230 10887537 -61266345 + AluSx SINE Alu 1 307 -5 2045 144 10 0 chr20 10887600 10887899 -61265983 - AluSx SINE Alu -10 302 1 1100 132 17 6 chr20 10888156 10888330 -61265552 + MLT1B LTR MaLR 215 390 0 291 167 25 142 chr20 10889293 10889413 -61264469 + LTR37A LTR ERV1 8 113 -313 2080 177 23 23 chr20 10889432 10889827 -61264055 - L1MB7 LINE L1 -92 6092 5698 926 210 69 34 chr20 10890038 10890300 -61263582 + LTR37A LTR ERV1 151 421 -5 459 169 43 119 chr20 10891257 10891535 -61262347 - LTR37B LTR ERV1 -3 465 209 937 175 63 53 chr20 10891737 10891943 -61261939 + MER58A DNA MER1_type 1 208 -16 2190 181 78 2 chr20 10891965 10892363 -61261519 - MSTA LTR MaLR 0 428 1 312 27 0 0 chr20 10892415 10892452 -61261430 + (T)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr20 10892923 10892945 -61260937 + AT_rich Low_complexity Low_complexity 1 22 0 495 213 0 11 chr20 10892950 10893044 -61260838 - FLAM_A SINE Alu -27 115 23 7335 174 154 23 chr20 10893045 10894597 -61259285 + MER52A LTR ERV1 1 1755 0 660 284 72 54 chr20 10895483 10895887 -61257995 + LTR16C LTR ERVL 6 491 0 257 213 100 0 chr20 10896021 10896101 -61257781 - L1MC4 LINE L1 -1338 6704 6617 22 70 0 0 chr20 10896166 10896209 -61257673 + AT_rich Low_complexity Low_complexity 1 43 0 1683 98 8 4 chr20 10896278 10896512 -61257370 - AluSq SINE Alu -41 272 38 976 249 93 35 chr20 10897746 10898091 -61255791 + MLT1A1 LTR MaLR 1 365 0 202 278 167 0 chr20 10898701 10898809 -61255073 + MIR SINE MIR 130 255 -7 939 175 84 0 chr20 10899162 10899328 -61254554 - MLT1F1 LTR MaLR -1 566 387 225 0 0 0 chr20 10899370 10899395 -61254487 + (TC)n Simple_repeat Simple_repeat 2 26 0 408 55 0 0 chr20 10899617 10899672 -61254210 + (CA)n Simple_repeat Simple_repeat 2 56 0 24 53 0 0 chr20 10899766 10899804 -61254078 + AT_rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr20 10900197 10900218 -61253664 + (CA)n Simple_repeat Simple_repeat 2 22 0 388 254 64 9 chr20 10900771 10900881 -61253001 + L2 LINE L2 3191 3306 -7 847 206 23 11 chr20 10900943 10901118 -61252764 - MLT1C LTR MaLR 0 467 291 804 221 90 67 chr20 10901652 10901951 -61251931 - MLT1C LTR MaLR -161 306 1 238 317 58 29 chr20 10901973 10902077 -61251805 - L2 LINE L2 0 3272 3166 21 0 0 0 chr20 10902118 10902139 -61251743 + AT_rich Low_complexity Low_complexity 1 21 0 260 269 128 13 chr20 10902444 10902522 -61251360 - LTR16C LTR ERVL 0 491 405 1916 100 89 0 chr20 10902656 10902927 -61250955 - AluSg SINE Alu -15 295 1 391 174 12 12 chr20 10902927 10903013 -61250869 + MER41B LTR ERV1 512 597 -38 1538 242 56 97 chr20 10903032 10903591 -61250291 - MER21B LTR ERV1 -19 586 20 991 92 0 8 chr20 10903592 10903723 -61250159 - AluSp/q SINE Alu -15 298 169 2250 105 3 3 chr20 10903916 10904211 -61249671 + AluSx SINE Alu 1 295 -17 3348 156 74 15 chr20 10904233 10904817 -61249065 - LTR35 LTR ERV1 0 618 1 2359 103 0 0 chr20 10906008 10906308 -61247574 - AluSg SINE Alu -10 300 1 335 231 39 67 chr20 10906456 10906560 -61247322 - MIR SINE MIR -65 197 97 1419 181 32 48 chr20 10906700 10907010 -61246872 - AluJo SINE Alu -2 310 6 223 366 149 0 chr20 10907463 10907597 -61246285 + MIR SINE MIR 47 200 -62 952 124 0 8 chr20 10908432 10908561 -61245321 - FLAM_C SINE Alu -5 128 1 349 259 72 22 chr20 10908709 10908848 -61245034 + MLT1J2 LTR MaLR 1 146 -304 542 282 11 52 chr20 10908918 10909092 -61244790 + MLT1J2 LTR MaLR 271 437 -13 1111 186 74 63 chr20 10909096 10909163 -61244719 + MLT2B3 LTR ERVL 1 66 -488 2149 133 45 48 chr20 10909163 10909539 -61244343 - THE1C LTR MaLR 0 375 1 1111 186 74 63 chr20 10909539 10909740 -61244142 + MLT2B3 LTR ERVL 66 272 -282 255 171 0 0 chr20 10909740 10909781 -61244101 + MLT2B3 LTR ERVL 472 512 -8 918 231 6 0 chr20 10909826 10910008 -61243874 + MER58A DNA MER1_type 42 224 0 1734 178 7 23 chr20 10910298 10910602 -61243280 + AluJb SINE Alu 1 299 -13 331 295 26 6 chr20 10910605 10910761 -61243121 + L1ME3A LINE L1 5789 5947 -223 3549 46 5 2 chr20 10910846 10911287 -61242595 + L1PA7 LINE L1 5736 6177 0 26 0 0 0 chr20 10911448 10911474 -61242408 + AT_rich Low_complexity Low_complexity 1 26 0 2038 204 43 87 chr20 10913128 10913227 -61240655 - MER92C LTR ERV1 -2 552 450 2065 122 14 0 chr20 10913227 10913515 -61240367 - AluY SINE Alu -19 292 1 2038 204 43 87 chr20 10913515 10913992 -61239890 - MER92C LTR ERV1 -104 450 1 288 310 10 0 chr20 10914307 10914407 -61239475 + MIR SINE MIR 109 209 -53 470 238 166 13 chr20 10914411 10914562 -61239320 - MER5A DNA MER1_type -6 183 10 1476 219 81 31 chr20 10915153 10915274 -61238608 + L1ME3A LINE L1 5478 5592 -570 10136 87 12 5 chr20 10915274 10916550 -61237332 + HSMAR1 DNA Mariner 2 1287 0 1476 219 81 31 chr20 10916550 10917006 -61236876 + L1ME3A LINE L1 5592 6104 -58 2679 241 127 11 chr20 10917036 10917746 -61236136 - MER21B LTR ERV1 -54 809 18 1015 196 178 25 chr20 10917756 10918031 -61235851 - MER2 DNA MER2_type -27 318 2 429 241 0 0 chr20 10918057 10918136 -61235746 - MER21B LTR ERV1 -773 90 12 259 226 0 0 chr20 10918150 10918212 -61235670 + L1ME3A LINE L1 6100 6161 -9 1148 158 0 15 chr20 10918438 10918634 -61235248 - AluJb SINE Alu -8 304 112 291 296 11 108 chr20 10920552 10920728 -61233154 - MIR3 SINE MIR -28 180 22 315 0 0 0 chr20 10920763 10920798 -61233084 + (A)n Simple_repeat Simple_repeat 1 35 0 626 254 107 17 chr20 10920886 10921063 -61232819 + MIR SINE MIR 31 223 -39 225 113 38 75 chr20 10926271 10926324 -61227558 + G-rich Low_complexity Low_complexity 3 53 0 324 188 0 0 chr20 10926483 10926547 -61227335 + (TG)n Simple_repeat Simple_repeat 2 65 0 207 0 0 0 chr20 10926604 10926627 -61227255 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 360 0 0 0 chr20 10927704 10927744 -61226138 + (CA)n Simple_repeat Simple_repeat 1 40 0 272 318 0 0 chr20 10930047 10930132 -61223750 + MIR SINE MIR 98 182 -80 190 226 151 38 chr20 10930327 10930380 -61223502 - L2 LINE L2 0 3272 3214 368 257 147 0 chr20 10930391 10930500 -61223382 - MIR SINE MIR -133 129 5 206 308 0 13 chr20 10931492 10931570 -61222312 - MIR SINE MIR -50 212 136 301 358 12 43 chr20 10931768 10931930 -61221952 + L2 LINE L2 2190 2346 -968 1859 299 122 13 chr20 10932029 10933027 -61220855 + L2 LINE L2 2055 3163 -150 285 266 183 23 chr20 10933046 10933347 -61220535 - HAL1 LINE L1 -110 2397 2049 * 509 280 15 38 chr20 10933343 10933607 -61220275 + HAL1 LINE L1 1429 1686 -821 402 265 73 73 chr20 10934463 10934667 -61219215 + HAL1 LINE L1 2214 2417 -90 3393 218 42 45 chr20 10935070 10935414 -61218468 + L1MB3 LINE L1 17 361 -6181 901 159 0 6 chr20 10935414 10935571 -61218311 + L1PA15 LINE L1 6010 6165 0 3393 218 42 45 chr20 10935571 10936179 -61217703 + L1MB3 LINE L1 361 966 -5576 267 198 103 35 chr20 10936185 10936301 -61217581 + L1M4 LINE L1 2759 2882 -3762 * 2570 233 52 29 chr20 10936300 10937653 -61216229 + L1MB3 LINE L1 949 2446 -4200 709 186 0 0 chr20 10937658 10937800 -61216082 + FLAM_A SINE Alu 6 147 0 1215 224 38 8 chr20 10937824 10938190 -61215692 + L1MB3 LINE L1 5114 5490 -1154 2501 196 50 22 chr20 10938190 10939346 -61214536 + L1M4 LINE L1 5062 6243 -439 * 4264 181 23 18 chr20 10939338 10940418 -61213464 + L1MB3 LINE L1 5599 6680 -1 299 247 35 59 chr20 10940418 10940503 -61213379 - MER5B DNA MER1_type -54 124 42 1265 197 10 69 chr20 10940504 10940794 -61213088 + AluJb SINE Alu 1 273 -39 196 140 18 88 chr20 10941003 10941060 -61212822 + MER5C DNA MER1_type 83 135 -189 583 234 153 10 chr20 10941200 10941409 -61212473 - MIR SINE MIR -2 260 22 255 293 30 20 chr20 10941445 10941544 -61212338 + MIR SINE MIR 44 143 -119 2293 112 0 0 chr20 10941599 10941911 -61211971 - AluSq SINE Alu -1 312 1 713 254 77 23 chr20 10942414 10942717 -61211165 - MLT1K LTR MaLR -9 579 212 555 244 17 17 chr20 10943004 10943123 -61210759 - MER5A DNA MER1_type -60 129 11 349 196 137 20 chr20 10943678 10943780 -61210102 + MIR SINE MIR 76 189 -73 311 288 72 24 chr20 10944005 10944130 -61209752 - MIR SINE MIR -79 183 53 21 0 0 0 chr20 10944241 10944262 -61209620 + AT_rich Low_complexity Low_complexity 1 21 0 185 180 20 0 chr20 10944409 10944459 -61209423 + CT-rich Low_complexity Low_complexity 2 52 0 2343 103 0 0 chr20 10944801 10945103 -61208779 - AluSx SINE Alu -10 302 1 645 314 79 16 chr20 10945250 10945629 -61208253 - MLT1I LTR MaLR -1 408 6 987 204 10 0 chr20 10946243 10946444 -61207438 + MER3 DNA MER1_type 5 207 -2 316 359 41 35 chr20 10947220 10947365 -61206517 - L2 LINE L2 -30 3242 3097 869 158 0 0 chr20 10947466 10947599 -61206283 + FLAM_C SINE Alu 1 133 0 719 233 157 54 chr20 10947654 10947691 -61206191 + MLT1J2 LTR MaLR 44 76 -374 1901 161 3 20 chr20 10947691 10947995 -61205887 - AluJb SINE Alu -13 299 1 719 233 157 54 chr20 10947995 10948326 -61205556 + MLT1J2 LTR MaLR 76 450 0 409 258 10 10 chr20 10948391 10948488 -61205394 - MIR SINE MIR -95 113 17 400 321 117 35 chr20 10948990 10949333 -61204549 + MLT1L LTR MaLR 1 371 -244 268 269 26 0 chr20 10949577 10949655 -61204227 + MIR SINE MIR 118 197 -65 * 1086 330 47 48 chr20 10949645 10950088 -61203794 - L2 LINE L2 0 3313 2871 1935 156 0 16 chr20 10950088 10950395 -61203487 + AluSx SINE Alu 1 302 -10 1086 330 47 48 chr20 10950395 10950984 -61202898 - L2 LINE L2 -442 2871 2275 1213 268 112 12 chr20 10951003 10951484 -61202398 - MLT1H LTR MaLR 0 549 21 391 328 25 25 chr20 10951528 10951732 -61202150 - L2 LINE L2 -1074 2240 2037 366 274 0 0 chr20 10952022 10952128 -61201754 + L1ME3A LINE L1 6065 6170 0 26 50 0 0 chr20 10952349 10952389 -61201493 + AT_rich Low_complexity Low_complexity 1 40 0 309 294 13 33 chr20 10952922 10953065 -61200817 - MIR SINE MIR -11 197 57 479 167 25 25 chr20 10953297 10953413 -61200469 + MLT1G LTR MaLR 6 121 -434 496 303 212 39 chr20 10953416 10953486 -61200396 - L2 LINE L2 -653 2661 2604 273 29 0 0 chr20 10953486 10953520 -61200362 + (CCCTAA)n Simple_repeat Simple_repeat 5 38 0 496 303 212 39 chr20 10953520 10953812 -61200070 - L2 LINE L2 -710 2604 2236 244 288 32 56 chr20 10954760 10954885 -61198997 + MIR SINE MIR 13 134 -128 239 336 49 62 chr20 10954851 10955095 -61198787 + L2 LINE L2 2940 3180 -133 * 1437 212 23 13 chr20 10955231 10955617 -61198265 - Charlie5 DNA MER1_type 0 2623 2234 613 160 21 35 chr20 10955625 10955769 -61198113 - MER3 DNA MER1_type -87 122 28 237 280 40 13 chr20 10955891 10955966 -61197916 - MIR SINE MIR -77 185 109 2196 110 6 22 chr20 10956454 10956771 -61197111 - AluSx SINE Alu 0 312 1 1403 269 57 33 chr20 10956881 10957372 -61196510 + MLT1J LTR MaLR 9 511 0 1894 168 10 3 chr20 10957698 10958007 -61195875 - AluJo SINE Alu -1 311 1 778 243 107 42 chr20 10959022 10959331 -61194551 + MLT1H LTR MaLR 216 544 -5 685 270 120 43 chr20 10960009 10960427 -61193455 - MLT1H LTR MaLR 0 549 100 233 361 19 4 chr20 10960444 10960564 -61193318 + MIR SINE MIR 35 157 -65 1383 234 76 18 chr20 10960567 10961003 -61192879 + MLT1C LTR MaLR 1 461 -6 271 304 65 11 chr20 10961814 10961906 -61191976 + MIR SINE MIR 20 116 -92 541 254 51 61 chr20 10962038 10962235 -61191647 - L2 LINE L2 0 3313 3119 1013 206 19 29 chr20 10962343 10962552 -61191330 - AluJo SINE Alu -16 296 90 794 153 0 0 chr20 10962582 10962700 -61191182 - FLAM_C SINE Alu -15 118 1 248 207 0 35 chr20 10963307 10963365 -61190517 + MLT1L LTR MaLR 145 200 -415 573 200 20 38 chr20 10963524 10963768 -61190114 + Tigger7 DNA MER2_type 1 316 -2171 * 885 162 17 0 chr20 10963757 10963930 -61189952 + Tigger7 DNA MER2_type 2316 2491 0 576 265 74 3 chr20 10963941 10964172 -61189710 + MLT1L LTR MaLR 345 615 0 325 265 0 100 chr20 10964865 10965035 -61188847 + MLT1H LTR MaLR 3 155 -394 1755 241 27 12 chr20 10967340 10967821 -61186061 + L1MC3 LINE L1 7124 7611 -174 258 164 164 27 chr20 10968896 10968969 -61184913 + MIR3 SINE MIR 91 173 -35 997 236 206 10 chr20 10968978 10969025 -61184857 + MLT1H LTR MaLR 59 96 -453 2240 110 0 0 chr20 10969025 10969325 -61184557 + AluSx SINE Alu 1 300 -12 997 236 206 10 chr20 10969325 10969676 -61184206 + MLT1H LTR MaLR 96 535 -14 856 303 50 42 chr20 10970391 10970794 -61183088 - MLT1K LTR MaLR -181 407 2 344 232 205 26 chr20 10970799 10970950 -61182932 - MER5B DNA MER1_type 0 178 1 230 220 110 33 chr20 10971890 10971981 -61181901 + MIR3 SINE MIR 109 206 -2 248 290 22 87 chr20 10972349 10972487 -61181395 - L2 LINE L2 -20 3293 3165 22 0 0 0 chr20 10972800 10972822 -61181060 + GC_rich Low_complexity Low_complexity 1 22 0 823 260 220 4 chr20 10973706 10974191 -61179691 + L2 LINE L2 2666 3262 -51 222 314 4 0 chr20 10974239 10974311 -61179571 - MIR SINE MIR -105 103 31 204 359 75 38 chr20 10974902 10975095 -61178787 + MIR SINE MIR 6 212 -50 319 208 144 32 chr20 10976354 10976479 -61177403 - MLT1H LTR MaLR 0 549 411 320 267 52 35 chr20 10976980 10977096 -61176786 + MIR SINE MIR 36 153 -109 572 319 43 0 chr20 10978213 10978376 -61175506 + MIR3 SINE MIR 21 190 -18 1999 112 22 4 chr20 10978394 10978670 -61175212 - AluSp SINE Alu -19 294 14 22315 82 10 15 chr20 10979504 10981430 -61172452 - L1PA6 LINE L1 -3 6151 4216 2552 64 0 6 chr20 10981430 10981742 -61172140 - AluY SINE Alu -1 310 1 22315 82 10 15 chr20 10981742 10985986 -61167896 - L1PA6 LINE L1 -1938 4216 11 836 289 128 4 chr20 10986052 10986325 -61167557 - LTR16C LTR ERVL -41 450 144 456 336 57 38 chr20 10986531 10986849 -61167033 - MLT1K LTR MaLR -78 510 187 407 331 45 7 chr20 10987628 10987782 -61166100 - MIR3 SINE MIR -7 201 42 542 319 27 51 chr20 10987997 10988097 -61165785 - MIR SINE MIR 0 262 161 3861 135 17 5 chr20 10988097 10988674 -61165208 + L1PA16 LINE L1 5580 6163 -3 542 319 27 51 chr20 10988674 10988830 -61165052 - MIR SINE MIR -101 161 12 22 0 0 0 chr20 10988950 10988972 -61164910 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr20 10990179 10990215 -61163667 + AT_rich Low_complexity Low_complexity 1 36 0 242 359 55 0 chr20 10990511 10990639 -61163243 + L2 LINE L2 2926 3060 -212 574 299 77 62 chr20 10990831 10991221 -61162661 - L2 LINE L2 -8 3305 2904 1879 130 22 4 chr20 10991221 10991598 -61162284 - AluSc SINE Alu 0 382 1 574 299 77 62 chr20 10991598 10991688 -61162194 - L2 LINE L2 -409 2904 2817 191 243 143 43 chr20 10991736 10991806 -61162076 + L2 LINE L2 3197 3273 -40 267 293 42 73 chr20 10992334 10992508 -61161374 - MIR3 SINE MIR -13 195 31 201 139 0 0 chr20 10992708 10992751 -61161131 + (T)n Simple_repeat Simple_repeat 1 43 0 267 31 0 0 chr20 10992949 10992981 -61160901 + (TC)n Simple_repeat Simple_repeat 2 33 0 363 44 0 0 chr20 10992983 10993028 -61160854 + (CA)n Simple_repeat Simple_repeat 1 45 0 1190 77 6 0 chr20 10993210 10993366 -61160516 + L1PB1 LINE L1 5634 5790 -361 291 28 0 0 chr20 10993366 10993402 -61160480 + (TG)n Simple_repeat Simple_repeat 2 37 0 2775 97 3 18 chr20 10993408 10993789 -61160093 + L1PB1 LINE L1 5776 6150 -1 2250 173 25 67 chr20 10994208 10994653 -61159229 + MSTB LTR MaLR 1 426 0 721 177 4 24 chr20 10994686 10994946 -61158936 + (CATATA)n Simple_repeat Simple_repeat 1 254 0 22 56 0 0 chr20 10995029 10995065 -61158817 + AT_rich Low_complexity Low_complexity 1 36 0 221 146 21 0 chr20 10995331 10995379 -61158503 + (TA)n Simple_repeat Simple_repeat 1 49 0 201 74 0 0 chr20 10995385 10995412 -61158470 + (CA)n Simple_repeat Simple_repeat 1 27 0 357 24 0 0 chr20 10995412 10995454 -61158428 + (TG)n Simple_repeat Simple_repeat 2 43 0 1762 223 52 38 chr20 10995741 10996238 -61157644 - L1ME3A LINE L1 -5 6165 5662 210 189 0 19 chr20 10996970 10997023 -61156859 + (TTAAA)n Simple_repeat Simple_repeat 2 53 0 492 319 135 18 chr20 10997027 10997341 -61156541 - L2 LINE L2 -145 3168 2784 2629 134 65 0 chr20 10997341 10997743 -61156139 - MSTA LTR MaLR 0 428 1 492 319 135 18 chr20 10997743 10997909 -61155973 - L2 LINE L2 -529 2784 2639 345 209 48 48 chr20 10998052 10998157 -61155725 - MIR3 SINE MIR -15 193 89 259 235 0 0 chr20 10998429 10998480 -61155402 + L2 LINE L2 3259 3309 -4 1545 258 46 71 chr20 10998605 10999197 -61154685 - MLT1K LTR MaLR -1 587 11 198 71 0 0 chr20 10999372 10999400 -61154482 + (T)n Simple_repeat Simple_repeat 1 28 0 338 203 83 68 chr20 11000097 11000230 -61153652 - LTR33A LTR ERVL -29 494 360 456 193 0 35 chr20 11000539 11000653 -61153229 + MER113 DNA MER1_type? 114 223 -298 209 251 230 68 chr20 11001364 11001555 -61152327 + L2 LINE L2 3087 3308 -5 339 261 17 35 chr20 11002135 11002250 -61151632 + MLT1H LTR MaLR 51 163 -386 344 257 26 79 chr20 11002376 11002528 -61151354 + MLT1H LTR MaLR 406 549 0 794 256 93 83 chr20 11002678 11002975 -61150907 + L2 LINE L2 2848 3153 -160 576 111 0 12 chr20 11002975 11003056 -61150826 + MADE1 DNA Mariner 1 80 0 794 256 93 83 chr20 11003056 11003218 -61150664 + L2 LINE L2 3153 3312 -1 824 192 0 0 chr20 11003319 11003449 -61150433 + FLAM_A SINE Alu 1 130 -3 214 335 174 29 chr20 11003507 11004193 -61149689 - L2 LINE L2 -637 2677 1893 231 235 78 0 chr20 11005589 11005640 -61148242 + MLT1H LTR MaLR 483 537 -12 1191 187 34 5 chr20 11005863 11006072 -61147810 + MER20 DNA MER1_type 3 217 -2 210 234 43 0 chr20 11006403 11006450 -61147432 - L2 LINE L2 -1 3312 3264 199 320 90 0 chr20 11007505 11007583 -61146299 - MIR SINE MIR -71 191 107 2378 129 28 3 chr20 11008203 11008560 -61145322 - MER47A DNA MER2_type 0 366 1 379 243 65 9 chr20 11008569 11008676 -61145206 + MIR SINE MIR 28 140 -122 572 274 112 53 chr20 11008683 11009040 -61144842 - L2 LINE L2 0 3313 2936 274 250 0 0 chr20 11009047 11009111 -61144771 + MIR SINE MIR 146 209 -53 441 296 239 9 chr20 11009160 11009494 -61144388 - L3 LINE CR1 -15 1562 1152 372 247 209 10 chr20 11011061 11011204 -61142678 - MER5A DNA MER1_type 0 189 13 387 224 72 32 chr20 11011250 11011375 -61142507 + L2 LINE L2 3184 3313 0 238 293 0 0 chr20 11011407 11011465 -61142417 + L2 LINE L2 3215 3272 0 259 288 23 61 chr20 11013399 11013531 -61140351 + MIR SINE MIR 76 202 -60 514 238 189 0 chr20 11013533 11013676 -61140206 - MER5A DNA MER1_type -6 183 14 1506 235 100 56 chr20 11014077 11014535 -61139347 + L1ME3 LINE L1 5651 6134 -36 2017 146 13 7 chr20 11014535 11014844 -61139038 - AluJo SINE Alu -1 311 1 1506 235 100 56 chr20 11014844 11014883 -61138999 + L1ME3 LINE L1 6134 6170 0 1048 281 76 43 chr20 11015355 11015868 -61138014 - MLT1H LTR MaLR -18 531 2 200 297 16 0 chr20 11016257 11016321 -61137561 + MER5B DNA MER1_type 114 178 0 932 231 11 0 chr20 11016332 11016514 -61137368 - MER5A DNA MER1_type -5 184 1 475 223 198 13 chr20 11016522 11016679 -61137203 - MER5A DNA MER1_type 0 189 4 1971 152 0 7 chr20 11017355 11017665 -61136217 - AluJb SINE Alu -4 308 1 371 290 82 48 chr20 11017825 11018056 -61135826 + MLT1J LTR MaLR 223 461 -50 962 181 6 0 chr20 11018170 11018336 -61135546 - MER5A DNA MER1_type -19 170 4 914 129 7 7 chr20 11018702 11018842 -61135040 + THE1-int LTR MaLR 897 1036 -544 24 67 0 0 chr20 11019497 11019542 -61134340 + AT_rich Low_complexity Low_complexity 1 45 0 6843 93 10 0 chr20 11019542 11019591 -61134291 - L1PA10 LINE L1 -11 6157 6110 2348 139 22 27 chr20 11019591 11019957 -61133925 + THE1B LTR MaLR 1 364 0 12802 88 2 0 chr20 11019958 11021533 -61132349 + THE1B-int LTR MaLR 2 1580 0 2497 120 19 25 chr20 11021533 11021899 -61131983 + THE1B LTR MaLR 1 364 0 6843 93 10 0 chr20 11021899 11022806 -61131076 - L1PA10 LINE L1 -57 6111 5200 296 229 180 8 chr20 11022876 11022998 -61130884 - MIR SINE MIR -116 146 4 268 139 70 26 chr20 11023260 11023375 -61130507 + (TA)n Simple_repeat Simple_repeat 1 120 0 3643 202 63 59 chr20 11023385 11023880 -61130002 - L1MB8 LINE L1 -6 6172 5681 813 112 0 0 chr20 11023880 11023987 -61129895 + AluSg/x SINE Alu 177 283 -27 372 22 0 0 chr20 11023988 11024033 -61129849 + (CA)n Simple_repeat Simple_repeat 2 46 0 3643 202 63 59 chr20 11024033 11025124 -61128758 - L1MB8 LINE L1 -496 5682 4462 258 136 0 0 chr20 11025165 11025209 -61128673 + (TA)n Simple_repeat Simple_repeat 1 44 0 1077 211 46 90 chr20 11025226 11025614 -61128268 - MLT2D LTR ERVL -43 371 1 1803 203 38 51 chr20 11025620 11026168 -61127714 - L1MB8 LINE L1 -1713 4433 3893 269 109 65 0 chr20 11026231 11026277 -61127605 + L1PB1 LINE L1 5737 5785 -366 1988 134 0 7 chr20 11026277 11026560 -61127322 + AluSq SINE Alu 1 281 -32 202 28 28 28 chr20 11026566 11026602 -61127280 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2336 95 3 3 chr20 11026604 11026910 -61126972 + AluSq SINE Alu 1 306 -7 761 53 86 5 chr20 11026918 11027485 -61126397 + (TA)n Simple_repeat Simple_repeat 1 612 0 2417 115 0 64 chr20 11027511 11027704 -61126178 + L1PB1 LINE L1 5782 5939 -212 2102 136 0 3 chr20 11027704 11028006 -61125876 + AluSx SINE Alu 1 301 -11 2417 115 0 64 chr20 11028006 11028204 -61125678 + L1PB1 LINE L1 5939 6148 -3 501 17 0 0 chr20 11028208 11028266 -61125616 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 2219 121 3 0 chr20 11028308 11028605 -61125277 + AluSc SINE Alu 1 298 -11 23 33 0 0 chr20 11028708 11028738 -61125144 + AT_rich Low_complexity Low_complexity 1 30 0 771 249 30 0 chr20 11030004 11030214 -61123668 + MIR SINE MIR 23 241 -21 414 0 0 0 chr20 11030225 11030271 -61123611 + (CAT)n Simple_repeat Simple_repeat 2 47 0 699 326 61 28 chr20 11030486 11030882 -61123000 - MLT1K LTR MaLR -56 532 124 1017 236 87 46 chr20 11031277 11031793 -61122089 - MLT1G LTR MaLR 0 595 10 2301 89 0 0 chr20 11031807 11032135 -61121747 + AluSc SINE Alu 1 328 0 1081 235 100 59 chr20 11033921 11034360 -61119522 + LTR16A1 LTR ERVL 1 457 0 194 324 29 29 chr20 11034733 11034801 -61119081 + MIR SINE MIR 76 143 -65 1845 72 16 0 chr20 11035568 11035817 -61118065 - L1PA13 LINE L1 -19 6144 5892 638 252 142 21 chr20 11035880 11036162 -61117720 - LTR16A1 LTR ERVL -11 446 131 379 370 0 8 chr20 11036407 11036534 -61117348 + MIR SINE MIR 20 145 -63 2345 76 7 0 chr20 11036713 11037014 -61116868 - AluY SINE Alu -8 303 1 441 291 74 14 chr20 11037016 11037301 -61116581 - L1M4 LINE L1 -3725 2421 2120 393 58 0 0 chr20 11037846 11037898 -61115984 + (TC)n Simple_repeat Simple_repeat 1 52 0 320 287 0 25 chr20 11038421 11038543 -61115339 - MLT1H LTR MaLR 0 549 431 324 321 124 5 chr20 11038560 11038753 -61115129 - LTR33 LTR ERVL -305 216 1 371 236 64 93 chr20 11039110 11039250 -61114632 + MIR3 SINE MIR 34 169 -39 896 265 111 11 chr20 11040436 11040931 -61112951 + MLT1G1 LTR MaLR 3 593 -2 2110 144 35 3 chr20 11041206 11041573 -61112309 + MLT1B LTR MaLR 12 390 0 257 290 0 60 chr20 11041573 11041673 -61112209 - MIR SINE MIR -90 172 79 549 247 98 47 chr20 11041902 11042137 -61111745 + MLT1L LTR MaLR 45 291 -324 2101 127 80 32 chr20 11042417 11042818 -61111064 - Tigger2 DNA MER2_type -1 2717 2298 393 162 15 0 chr20 11042822 11042890 -61110992 - Tigger2 DNA MER2_type -2649 69 1 4597 194 32 26 chr20 11043664 11044292 -61109590 - L1MD1 LINE L1 0 6242 5619 2163 99 0 3 chr20 11044292 11044575 -61109307 - AluSg SINE Alu -13 297 16 4597 194 32 26 chr20 11044575 11045178 -61108704 - L1MD1 LINE L1 -623 5619 5003 2555 110 6 8 chr20 11045178 11045543 -61108339 - THE1B LTR MaLR 0 364 1 4597 194 32 26 chr20 11045543 11045647 -61108235 - L1MD1 LINE L1 -1239 5003 4901 323 247 16 73 chr20 11045750 11045936 -61107946 - L1MD1 LINE L1 -2990 3156 2960 * 2944 117 66 66 chr20 11045929 11046208 -61107674 - L1MA5 LINE L1 -6 6294 6016 1586 164 52 151 chr20 11046208 11046818 -61107064 - L1PB4 LINE L1 -143 6013 5464 3903 113 41 12 chr20 11046821 11047285 -61106597 + L1PB4 LINE L1 4995 5444 -707 3903 90 50 20 chr20 11047285 11047880 -61106002 + L1PB1 LINE L1 5535 6151 0 3903 113 41 12 chr20 11047880 11047901 -61105981 + L1PB1 LINE L1 5444 6151 0 2398 150 62 5 chr20 11047896 11048061 -61105821 - L1PB4 LINE L1 -743 5403 5249 * 210 71 0 0 chr20 11048061 11048089 -61105793 + (ATG)n Simple_repeat Simple_repeat 1 28 0 2398 150 62 5 chr20 11048089 11048492 -61105390 - L1PB4 LINE L1 -897 5249 4887 320 338 75 0 chr20 11048951 11049084 -61104798 - MIR SINE MIR -38 224 82 988 102 0 22 chr20 11049365 11049502 -61104380 - AluSq/x SINE Alu -179 134 1 866 291 50 25 chr20 11050334 11050451 -61103431 + LTR16C LTR ERVL 94 207 -284 2171 161 43 28 chr20 11050451 11050873 -61103009 - MSTA LTR MaLR 0 428 1 866 291 50 25 chr20 11050873 11051112 -61102770 + LTR16C LTR ERVL 207 459 -32 499 251 43 2 chr20 11051145 11051329 -61102553 + MLT1H LTR MaLR 12 231 -318 333 154 103 0 chr20 11051331 11051409 -61102473 + MLT1H LTR MaLR 464 549 0 299 319 238 6 chr20 11051865 11052025 -61101857 + MIR3 SINE MIR 4 200 -8 384 127 0 32 chr20 11052111 11052174 -61101708 + MER5A DNA MER1_type 1 61 -128 1323 166 44 9 chr20 11052174 11052403 -61101479 - AluJo SINE Alu -75 237 1 342 154 0 0 chr20 11052405 11052457 -61101425 + MER5A DNA MER1_type 52 103 -86 464 250 20 0 chr20 11052609 11052709 -61101173 + MER5A DNA MER1_type 88 189 0 214 290 213 7 chr20 11052719 11052874 -61101008 + MER5A DNA MER1_type 3 189 0 320 274 27 0 chr20 11052936 11053009 -61100873 - MER5A DNA MER1_type -106 83 9 319 217 0 0 chr20 11053083 11053143 -61100739 + MER91B DNA MER1_type 5 64 -126 477 179 74 11 chr20 11053221 11053316 -61100566 + MIR SINE MIR 49 149 -113 488 204 129 0 chr20 11053930 11054077 -61099805 - L1M4 LINE L1 -1274 4872 4707 1059 250 32 18 chr20 11055876 11056156 -61097726 - LTR8 LTR ERV1 0 691 408 * 3524 116 14 0 chr20 11056143 11056693 -61097189 + MER41B LTR ERV1 78 635 0 228 255 0 0 chr20 11057274 11057325 -61096557 + L2 LINE L2 3263 3313 0 402 85 0 0 chr20 11057499 11057558 -61096324 + (TA)n Simple_repeat Simple_repeat 2 60 0 326 239 192 54 chr20 11057579 11057913 -61095969 - L1ME4a LINE L1 -5 6116 5737 1151 269 139 5 chr20 11058144 11058576 -61095306 + LTR16C LTR ERVL 1 490 -1 225 0 0 0 chr20 11058629 11058654 -61095228 + (T)n Simple_repeat Simple_repeat 1 25 0 488 268 55 38 chr20 11059592 11059844 -61094038 - MLT1L LTR MaLR -39 576 237 207 0 0 0 chr20 11059901 11059924 -61093958 + (A)n Simple_repeat Simple_repeat 1 23 0 237 198 0 81 chr20 11060173 11060259 -61093623 - MLT1D LTR MaLR -16 526 448 256 313 149 10 chr20 11060302 11060497 -61093385 - MLT1D LTR MaLR -297 252 31 210 211 39 0 chr20 11061451 11061503 -61092379 + MIR SINE MIR 136 189 -73 432 293 26 0 chr20 11061535 11061651 -61092231 - MIR SINE MIR -65 197 79 844 299 27 27 chr20 11061817 11062341 -61091541 + MLT1K LTR MaLR 17 572 -16 425 176 23 92 chr20 11062680 11062748 -61091134 + MER3 DNA MER1_type 49 58 -104 2062 124 0 23 chr20 11062748 11063054 -61090828 - AluSc SINE Alu -10 299 1 425 176 23 92 chr20 11063054 11063116 -61090766 + MER3 DNA MER1_type 58 123 -39 1025 210 52 3 chr20 11063123 11063433 -61090449 + MER3 DNA MER1_type 2242 2566 0 397 169 24 48 chr20 11064113 11064196 -61089686 - MLT1D LTR MaLR -424 81 1 204 125 0 0 chr20 11065174 11065206 -61088676 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1302 163 40 8 chr20 11065576 11065827 -61088055 - LTR16C LTR ERVL 0 491 233 1037 125 32 132 chr20 11065828 11066109 -61087773 + LTR12 LTR ERV1 22 274 -440 316 200 57 19 chr20 11066112 11066217 -61087665 + LTR30 LTR ERV1 544 652 -70 651 89 0 0 chr20 11066217 11066307 -61087575 + LTR12 LTR ERV1 617 706 -8 463 278 86 29 chr20 11066311 11066520 -61087362 - LTR16C LTR ERVL -236 255 35 302 267 104 25 chr20 11067626 11067866 -61086016 - LTR16A1 LTR ERVL 0 457 199 268 341 49 12 chr20 11067875 11067957 -61085925 - L2 LINE L2 -61 3211 3127 1315 248 44 16 chr20 11068914 11069297 -61084585 - LTR16C LTR ERVL 0 491 98 244 361 10 10 chr20 11069513 11069610 -61084272 - L2 LINE L2 -255 3058 2962 501 155 19 10 chr20 11069636 11069739 -61084143 - FRAM SINE Alu -2 174 71 239 316 0 63 chr20 11071228 11071323 -61082559 - L3 LINE CR1 -106 1471 1383 317 379 122 9 chr20 11072034 11072377 -61081505 + L2 LINE L2 2568 2949 -365 191 302 58 47 chr20 11072497 11072583 -61081299 + L2 LINE L2 3090 3176 -96 185 303 9 64 chr20 11074057 11074130 -61079752 - MIR SINE MIR -10 252 185 2294 113 46 62 chr20 11074130 11074565 -61079317 + MSTA LTR MaLR 1 428 0 185 303 9 64 chr20 11074565 11074600 -61079282 - MIR SINE MIR -77 185 150 673 264 102 21 chr20 11074686 11074921 -61078961 - MLT1I LTR MaLR -151 258 5 386 230 46 0 chr20 11074928 11075015 -61078867 - MIR SINE MIR -114 148 58 223 301 46 56 chr20 11075357 11075573 -61078309 + L2 LINE L2 2762 2975 -339 4823 102 24 1 chr20 11075633 11076356 -61077526 - L1MA2 LINE L1 -1 6303 5565 1450 206 98 0 chr20 11076363 11076688 -61077194 + MSTD LTR MaLR 40 396 0 362 359 97 38 chr20 11076688 11076978 -61076904 + L2 LINE L2 2966 3272 0 434 337 121 34 chr20 11078655 11079248 -61074634 - L2 LINE L2 -566 2748 2104 257 194 0 16 chr20 11079293 11079355 -61074527 + T-rich Low_complexity Low_complexity 4 64 0 685 172 35 6 chr20 11079370 11079544 -61074338 + CT-rich Low_complexity Low_complexity 2 180 0 559 329 89 15 chr20 11079565 11079957 -61073925 + MLT1K LTR MaLR 10 430 -158 188 269 103 13 chr20 11080148 11080226 -61073656 - L2 LINE L2 -1264 2050 1966 222 358 32 41 chr20 11080353 11080476 -61073406 + L2 LINE L2 2929 3050 -222 271 360 88 9 chr20 11081042 11081156 -61072726 + L2 LINE L2 3113 3235 -37 1041 285 56 25 chr20 11081157 11081602 -61072280 - LTR33A LTR ERVL -3 520 62 210 193 18 70 chr20 11081647 11081704 -61072178 + L2 LINE L2 3259 3312 -1 1145 237 86 54 chr20 11083093 11083536 -61070346 + LTR16A1 LTR ERVL 1 457 0 1431 118 228 0 chr20 11083711 11083948 -61069934 + AluSx SINE Alu 1 291 -11 324 70 0 0 chr20 11083959 11084002 -61069880 + (CA)n Simple_repeat Simple_repeat 2 44 0 273 321 48 71 chr20 11084140 11084392 -61069490 - MIR SINE MIR -2 260 15 203 267 0 0 chr20 11084923 11084983 -61068899 + A-rich Low_complexity Low_complexity 1 60 0 214 189 132 0 chr20 11085186 11085239 -61068643 - MER5A DNA MER1_type -129 60 1 498 167 0 0 chr20 11085668 11085752 -61068130 + L1MC4 LINE L1 6944 7027 -1015 424 222 116 111 chr20 11085752 11085959 -61067923 - MER34 LTR ERV1 -2 540 356 1048 223 32 11 chr20 11086328 11086611 -61067271 + L1MC4 LINE L1 7024 7312 -730 899 195 56 5 chr20 11086613 11086808 -61067074 - Tigger2 DNA MER2_type -13 2705 2501 * 1056 84 0 0 chr20 11086805 11086948 -61066934 - Tigger2 DNA MER2_type -2272 446 304 1721 200 79 103 chr20 11086969 11087143 -61066739 + L1MC4 LINE L1 7400 7577 -465 234 0 0 0 chr20 11087143 11087169 -61066713 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1721 200 79 103 chr20 11087169 11087653 -61066229 + L1MC4 LINE L1 7577 8042 0 841 239 35 5 chr20 11088080 11088281 -61065601 + MLT2C1 LTR ERVL 4 210 -187 318 211 0 0 chr20 11088281 11088352 -61065530 + L1MC4 LINE L1 7783 7853 -189 479 219 12 94 chr20 11088357 11088517 -61065365 + MLT2C1 LTR ERVL 196 342 -55 702 62 26 0 chr20 11088517 11088630 -61065252 + (TCTA)n Simple_repeat Simple_repeat 1 116 0 561 62 0 37 chr20 11088644 11088725 -61065157 - MADE1 DNA Mariner -2 78 1 203 104 0 83 chr20 11088736 11088784 -61065098 + (CTAGGG)n Simple_repeat Simple_repeat 5 48 0 737 189 0 34 chr20 11088938 11089086 -61064796 + FLAM_C SINE Alu 1 143 0 805 242 132 7 chr20 11092726 11093007 -61060875 + MER5C DNA MER1_type 8 323 -1 21 0 0 0 chr20 11093731 11093752 -61060130 + AT_rich Low_complexity Low_complexity 1 21 0 491 305 52 0 chr20 11093918 11094072 -61059810 - MIR SINE MIR -50 212 51 1349 139 63 0 chr20 11096527 11096779 -61057103 + L1MA2 LINE L1 6037 6304 0 210 37 0 0 chr20 11096809 11096836 -61057046 + (CA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr20 11098455 11098483 -61055399 + AT_rich Low_complexity Low_complexity 1 28 0 1533 138 4 17 chr20 11098827 11099067 -61054815 - AluSx SINE Alu -75 237 1 634 231 19 43 chr20 11099556 11099764 -61054118 - MER3 DNA MER1_type -2 207 5 22 35 0 0 chr20 11100343 11100372 -61053510 + AT_rich Low_complexity Low_complexity 1 29 0 2126 117 0 13 chr20 11101110 11101409 -61052473 + AluSx SINE Alu 18 312 0 781 292 128 39 chr20 11102838 11103454 -61050428 + HAL1b LINE L1 207 877 -471 24 53 0 0 chr20 11103735 11103773 -61050109 + AT_rich Low_complexity Low_complexity 1 38 0 23 86 0 0 chr20 11103992 11104050 -61049832 + AT_rich Low_complexity Low_complexity 1 58 0 345 266 104 66 chr20 11107495 11107920 -61045962 + MLT1K LTR MaLR 102 577 -11 303 269 115 10 chr20 11107996 11108204 -61045678 + L2 LINE L2 1975 2204 -1110 2223 84 0 0 chr20 11108223 11108496 -61045386 - AluSx SINE Alu -39 273 1 452 306 12 25 chr20 11109379 11109539 -61044343 + MIR SINE MIR 76 233 -29 314 285 68 109 chr20 11109758 11110098 -61043784 - L1M2 LINE L1 -5752 1097 772 525 131 0 0 chr20 11110098 11110182 -61043700 + (CCCCCG)n Simple_repeat Simple_repeat 3 86 0 2975 93 9 29 chr20 11110810 11111259 -61042623 + L1PA13 LINE L1 5721 6160 -3 226 211 39 0 chr20 11111355 11111407 -61042475 + A-rich Low_complexity Low_complexity 3 56 0 814 306 44 19 chr20 11111563 11111975 -61041907 - L1ME3A LINE L1 -219 5951 5530 4285 124 67 72 chr20 11112121 11113558 -61040324 - pTR5 LTR ERV1 0 2438 61 21 36 0 0 chr20 11114821 11114849 -61039033 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr20 11115796 11115817 -61038065 + (TTCC)n Simple_repeat Simple_repeat 2 22 0 471 35 0 0 chr20 11115818 11115875 -61038007 + (TC)n Simple_repeat Simple_repeat 2 58 0 682 158 0 63 chr20 11115876 11116003 -61037879 - FRAM SINE Alu -58 118 1 277 265 94 40 chr20 11116272 11116624 -61037258 - L1MDa LINE L1 -2920 3620 3242 414 0 0 0 chr20 11116707 11116753 -61037129 + (TG)n Simple_repeat Simple_repeat 2 47 0 2389 60 0 26 chr20 11116769 11117071 -61036811 - AluY SINE Alu -17 294 1 372 285 26 67 chr20 11117444 11117680 -61036202 - L1MDa LINE L1 -3864 2676 2452 292 353 0 9 chr20 11118108 11118224 -61035658 + MIR SINE MIR 10 124 -138 1456 203 159 5 chr20 11118241 11118709 -61035173 + MLT1F LTR MaLR 1 542 0 279 0 0 0 chr20 11118853 11118884 -61034998 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 709 152 4 2 chr20 11118887 11119139 -61034743 - 7SLRNA srpRNA srpRNA -21 299 1 350 231 51 161 chr20 11119208 11119637 -61034245 - L1MDa LINE L1 -4731 1990 1609 248 267 133 9 chr20 11119897 11120002 -61033880 + MLT1L LTR MaLR 498 615 0 1915 89 0 0 chr20 11121463 11121709 -61032173 - AluSg SINE Alu -11 299 54 1038 279 118 23 chr20 11121846 11122509 -61031373 - L2 LINE L2 -10 3303 2570 331 225 362 7 chr20 11122576 11122714 -61031168 + MLT1H LTR MaLR 266 452 -97 208 289 298 0 chr20 11122830 11122944 -61030938 - L2 LINE L2 -746 2568 2421 686 95 147 0 chr20 11123123 11123239 -61030643 + AluSq/x SINE Alu 1 133 -179 430 254 73 39 chr20 11123431 11123636 -61030246 + LTR16A1 LTR ERVL 34 245 -212 678 253 10 26 chr20 11123938 11124132 -61029750 + LTR16A1 LTR ERVL 267 457 0 377 348 36 0 chr20 11124664 11124802 -61029080 - MIR3 SINE MIR -12 196 54 245 236 18 0 chr20 11125218 11125273 -61028609 - MER5A DNA MER1_type -6 183 128 4003 175 37 19 chr20 11125291 11126785 -61027097 + L1MB8 LINE L1 4358 5869 -309 376 338 13 26 chr20 11127078 11127229 -61026653 + MIR3 SINE MIR 54 202 -6 267 278 0 0 chr20 11127450 11127504 -61026378 - Tigger3(Golem) DNA MER2_type -2975 54 1 1068 200 35 32 chr20 11127506 11127790 -61026092 - L1MB7 LINE L1 -44 6129 5843 2978 115 78 22 chr20 11127790 11128330 -61025552 + Tigger3(Golem) DNA MER2_type 2374 2943 -86 2394 107 24 19 chr20 11128332 11128705 -61025177 + THE1C LTR MaLR 1 375 0 238 244 70 58 chr20 11128791 11128877 -61025005 - MER5A DNA MER1_type -98 91 5 669 265 133 62 chr20 11129157 11129644 -61024238 - LTR33A LTR ERVL 0 523 2 908 198 6 0 chr20 11129754 11129926 -61023956 + MER5B DNA MER1_type 4 176 -2 23 0 0 0 chr20 11130879 11130902 -61022980 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr20 11131037 11131065 -61022817 + AT_rich Low_complexity Low_complexity 1 28 0 654 199 192 0 chr20 11131143 11131294 -61022588 - MER5A DNA MER1_type -1 188 9 31 68 0 0 chr20 11131432 11131491 -61022391 + AT_rich Low_complexity Low_complexity 1 59 0 195 204 0 0 chr20 11131583 11131627 -61022255 + (CATA)n Simple_repeat Simple_repeat 1 44 0 228 205 131 41 chr20 11132104 11132226 -61021656 - L1MB7 LINE L1 -860 5431 5299 531 239 60 60 chr20 11132314 11132481 -61021401 + MIR SINE MIR 2 168 -94 22 70 0 0 chr20 11132896 11132939 -61020943 + AT_rich Low_complexity Low_complexity 1 43 0 401 304 57 57 chr20 11133094 11133571 -61020311 - L1MB7 LINE L1 -2126 4020 3544 2047 119 0 7 chr20 11133677 11133984 -61019898 + AluSx SINE Alu 1 305 0 269 167 28 56 chr20 11134966 11135038 -61018844 - MLT1H LTR MaLR -381 168 99 538 262 14 21 chr20 11135983 11136070 -61017812 + LTR16C LTR ERVL 347 434 -57 782 176 0 8 chr20 11136070 11136201 -61017681 + FLAM_A SINE Alu 4 133 0 538 262 14 21 chr20 11136201 11136258 -61017624 + LTR16C LTR ERVL 434 490 -1 2387 125 13 13 chr20 11136513 11136888 -61016994 - THE1C LTR MaLR 0 375 1 240 344 47 23 chr20 11137267 11137395 -61016487 + LTR16C LTR ERVL 199 329 -162 844 194 127 40 chr20 11138751 11139003 -61014879 + MER74A LTR ERVL 1 274 -284 24 53 0 0 chr20 11140164 11140202 -61013680 + AT_rich Low_complexity Low_complexity 1 38 0 287 56 0 0 chr20 11140748 11140784 -61013098 + tRNA-His-CAC tRNA tRNA 1 36 -39 22 35 0 0 chr20 11140884 11140913 -61012969 + AT_rich Low_complexity Low_complexity 1 29 0 192 308 77 13 chr20 11140948 11141026 -61012856 - L2 LINE L2 -52 3220 3138 3492 133 11 52 chr20 11141107 11141745 -61012137 + LTR9 LTR ERV1 1 612 0 21 0 0 0 chr20 11141781 11141802 -61012080 + AT_rich Low_complexity Low_complexity 1 21 0 2060 93 0 29 chr20 11142487 11142821 -61011061 - AluY SINE Alu 0 337 12 600 261 122 55 chr20 11143199 11143678 -61010204 - L1MB7 LINE L1 -2868 3278 2763 1135 23 0 0 chr20 11144105 11144235 -61009647 - AluY SINE Alu -10 301 172 1034 215 78 90 chr20 11144843 11145243 -61008639 - MLT1H LTR MaLR -105 444 50 2246 118 0 6 chr20 11145960 11146274 -61007608 - AluSx SINE Alu 0 312 1 1264 46 0 0 chr20 11146642 11146793 -61007089 - L1PA3 LINE L1 -5 6150 6000 6393 141 74 6 chr20 11147119 11148259 -61005623 + Tigger3b DNA MER2_type 14 1230 -1 349 287 54 83 chr20 11148847 11149185 -61004697 + MLT1I LTR MaLR 13 367 -182 2133 163 67 8 chr20 11149921 11150295 -61003587 + MSTD LTR MaLR 1 396 0 472 254 211 7 chr20 11150372 11150514 -61003368 + MER5B DNA MER1_type 1 171 -7 275 174 47 0 chr20 11150756 11150905 -61002977 + (TA)n Simple_repeat Simple_repeat 1 156 0 23 33 0 0 chr20 11151018 11151048 -61002834 + AT_rich Low_complexity Low_complexity 1 30 0 1824 155 0 21 chr20 11151180 11151499 -61002383 + AluJb SINE Alu 1 313 0 4514 159 61 21 chr20 11151533 11151862 -61002020 - L1MB3 LINE L1 0 6183 5869 2075 97 0 66 chr20 11151862 11152182 -61001700 + AluSc SINE Alu 1 299 -10 4514 159 61 21 chr20 11152182 11152899 -61000983 - L1MB3 LINE L1 -314 5869 5088 2147 120 0 13 chr20 11153741 11154042 -60999840 - AluSg SINE Alu -13 297 1 204 267 123 48 chr20 11154098 11154244 -60999638 - MIR3 SINE MIR -31 177 21 1231 177 117 38 chr20 11154248 11154565 -60999317 + MER2 DNA MER2_type 3 344 0 3033 37 11 0 chr20 11154702 11155077 -60998805 - L1PA4 LINE L1 0 6155 5777 402 314 155 38 chr20 11155821 11155992 -60997890 + L3 LINE CR1 1296 1504 -73 1226 147 0 82 chr20 11155992 11156237 -60997645 + MER30 DNA MER1_type 2 226 -4 402 314 155 38 chr20 11156237 11156304 -60997578 + L3 LINE CR1 1504 1562 -15 2299 91 7 19 chr20 11157225 11157534 -60996348 - AluY SINE Alu -6 305 1 503 342 103 7 chr20 11159321 11159602 -60994280 + HAL1 LINE L1 1608 1915 -592 539 256 0 30 chr20 11160004 11160168 -60993714 + HAL1b LINE L1 747 905 -443 245 256 24 49 chr20 11160261 11160343 -60993539 + HAL1b LINE L1 836 915 -433 1248 173 107 0 chr20 11160376 11160665 -60993217 + MER33 DNA MER1_type 1 320 -4 21 0 0 0 chr20 11161163 11161184 -60992698 + AT_rich Low_complexity Low_complexity 1 21 0 1278 161 139 15 chr20 11162032 11162299 -60991583 + AluJb SINE Alu 1 300 -2 1020 264 79 27 chr20 11163452 11163782 -60990100 + MLT1I LTR MaLR 63 409 0 736 270 38 0 chr20 11164486 11164671 -60989211 + MIR SINE MIR 40 231 -31 540 0 0 0 chr20 11164776 11164836 -60989046 + (TA)n Simple_repeat Simple_repeat 2 61 0 1546 179 7 35 chr20 11164839 11165129 -60988753 - AluJo SINE Alu -30 282 1 2357 130 11 19 chr20 11165644 11166020 -60987862 - THE1C LTR MaLR 0 375 3 727 275 147 46 chr20 11167305 11167651 -60986231 - LTR16A1 LTR ERVL -22 435 55 2839 148 0 5 chr20 11167799 11168246 -60985636 - Tigger2 DNA MER2_type -1 2717 2273 367 212 45 0 chr20 11168236 11168302 -60985580 - Tigger2 DNA MER2_type -2649 69 1 * 444 276 22 55 chr20 11168863 11169044 -60984838 - LTR33 LTR ERVL -346 175 1 826 290 82 21 chr20 11169396 11169861 -60984021 - HAL1b LINE L1 -553 795 303 2096 145 40 6 chr20 11169862 11170214 -60983668 - THE1B LTR MaLR 0 364 1 1950 188 96 32 chr20 11170225 11170393 -60983489 + MLT1D LTR MaLR 7 163 -342 261 0 0 0 chr20 11170393 11170422 -60983460 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1950 188 96 32 chr20 11170422 11170720 -60983162 + MLT1D LTR MaLR 163 503 -2 2525 148 21 86 chr20 11171632 11171758 -60982124 - L1MB7 LINE L1 -11 6173 6040 2755 7 0 3 chr20 11171758 11172062 -60981820 - AluYa5 SINE Alu -8 303 1 2525 148 21 86 chr20 11172062 11172494 -60981388 - L1MB7 LINE L1 -144 6040 5651 229 362 64 0 chr20 11172626 11172720 -60981162 - MIR SINE MIR -71 137 38 1767 240 48 28 chr20 11172791 11173253 -60980629 - MLT1H LTR MaLR -4 545 75 1874 188 6 22 chr20 11173253 11173447 -60980435 - MLT1A1 LTR MaLR -2 363 176 2850 194 82 16 chr20 11173447 11174129 -60979753 + LTR8A LTR ERV1 1 727 0 1874 188 6 22 chr20 11174129 11174296 -60979586 - MLT1A1 LTR MaLR -189 176 8 279 170 19 0 chr20 11174313 11174366 -60979516 - MLT1H LTR MaLR -495 54 1 2126 191 38 16 chr20 11174683 11175134 -60978748 + MER65C LTR ERV1 1 461 0 200 303 202 0 chr20 11175174 11175283 -60978599 + L2 LINE L2 3142 3272 0 358 239 8 43 chr20 11175388 11175505 -60978377 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 921 281 99 34 chr20 11176515 11176991 -60976891 + LTR33 LTR ERVL 1 507 -14 270 193 0 0 chr20 11177271 11177328 -60976554 + (TG)n Simple_repeat Simple_repeat 1 57 0 319 339 85 15 chr20 11177923 11178053 -60975829 + MIR SINE MIR 6 144 -118 897 236 140 71 chr20 11178840 11179277 -60974605 + LTR33 LTR ERVL 3 469 -52 2164 123 0 0 chr20 11179301 11179609 -60974273 - AluSx SINE Alu -4 308 1 1024 316 65 48 chr20 11179717 11180639 -60973243 + L2 LINE L2 2367 3306 -7 678 293 56 50 chr20 11180642 11181179 -60972703 + L1ME1 LINE L1 5320 5853 -313 45 45 0 0 chr20 11181489 11181555 -60972327 + AT_rich Low_complexity Low_complexity 1 66 0 2143 246 115 40 chr20 11181556 11182277 -60971605 + MER21B LTR ERV1 1 775 -88 315 0 0 0 chr20 11182277 11182312 -60971570 + (CA)n Simple_repeat Simple_repeat 2 36 0 281 277 27 54 chr20 11183314 11183426 -60970456 + MIR SINE MIR 36 144 -118 1140 286 48 41 chr20 11184102 11184184 -60969698 + HAL1 LINE L1 2 82 -2425 2135 71 3 0 chr20 11184184 11184466 -60969416 - L1PA7 LINE L1 -7 6147 5865 1140 286 48 41 chr20 11184466 11184900 -60968982 + HAL1 LINE L1 82 522 -1985 729 300 39 16 chr20 11184955 11185212 -60968670 - MER115 DNA AcHobo -243 450 188 559 231 46 0 chr20 11185311 11185419 -60968463 - MER81 DNA DNA 0 114 2 1704 266 63 24 chr20 11185442 11186138 -60967744 + HAL1 LINE L1 555 1277 -1230 574 142 0 54 chr20 11186139 11186287 -60967595 + (GAAA)n Simple_repeat Simple_repeat 4 143 0 1484 265 90 87 chr20 11186338 11187551 -60966331 + HAL1 LINE L1 1288 2504 -3 2491 63 0 0 chr20 11187806 11188107 -60965775 - AluY SINE Alu -10 301 1 1373 285 72 32 chr20 11188244 11188770 -60965112 + MLT1H LTR MaLR 1 547 -2 2837 10 0 0 chr20 11189378 11189687 -60964195 - AluYa5 SINE Alu -2 309 1 557 258 36 57 chr20 11189779 11190027 -60963855 + L1ME LINE L1 5560 5798 -368 266 274 85 102 chr20 11191815 11191970 -60961912 - HAL1b LINE L1 -4 6117 5961 192 40 0 0 chr20 11191970 11191995 -60961887 + (CA)n Simple_repeat Simple_repeat 2 26 0 266 274 85 102 chr20 11191995 11192405 -60961477 - HAL1b LINE L1 -160 5961 1204 1555 183 33 23 chr20 11192539 11192845 -60961037 - AluJo SINE Alu -3 309 1 1891 118 62 14 chr20 11192984 11193273 -60960609 - AluSx SINE Alu -9 303 1 623 309 121 26 chr20 11193853 11194316 -60959566 - L1M4 LINE L1 -907 5239 4733 25 0 0 0 chr20 11194316 11194341 -60959541 + AT_rich Low_complexity Low_complexity 1 25 0 555 114 0 0 chr20 11194710 11194789 -60959093 + MADE1 DNA Mariner 2 80 0 570 170 54 0 chr20 11195022 11195134 -60958748 + MER57A LTR ERV1 286 403 0 3364 188 39 36 chr20 11195134 11195902 -60957980 + MER57A-int LTR ERV1 1 850 -6687 444 258 23 24 chr20 11195934 11196110 -60957772 + MER57A-int LTR ERV1 842 2713 -3233 749 234 98 38 chr20 11196110 11196375 -60957507 + MER34C LTR ERV1 147 427 -158 429 228 15 21 chr20 11196376 11196505 -60957377 + MER57A-int LTR ERV1 1094 1190 -3681 292 180 86 40 chr20 11196479 11196609 -60957273 + MER57A-int LTR ERV1 1085 1169 -3767 * 763 178 10 87 chr20 11196617 11196825 -60957057 + MER57A-int LTR ERV1 3081 3272 -3059 597 78 0 0 chr20 11196878 11196955 -60956927 + MER57A-int LTR ERV1 3265 3341 -2990 494 209 0 0 chr20 11197005 11197110 -60956772 + MER57A-int LTR ERV1 3348 3452 -2879 889 209 39 31 chr20 11197228 11197791 -60956091 + MER57A-int LTR ERV1 1710 3116 -1922 * 5256 179 20 89 chr20 11197784 11199188 -60954694 + MER57A-int LTR ERV1 3703 5511 -1949 1632 173 7 15 chr20 11199188 11199459 -60954423 - AluJo SINE Alu -41 271 3 5256 179 20 89 chr20 11199459 11199750 -60954132 + MER57A-int LTR ERV1 5511 5821 -1639 3183 221 59 20 chr20 11199973 11200317 -60953565 + MER57A-int LTR ERV1 2520 2849 -4688 1935 158 81 57 chr20 11200317 11200693 -60953189 + MSTA LTR MaLR 1 389 -39 1693 171 40 20 chr20 11200693 11200997 -60952885 - AluJb SINE Alu -2 310 1 1935 158 81 57 chr20 11200997 11201038 -60952844 + MSTA LTR MaLR 389 428 0 3183 221 59 20 chr20 11201038 11201488 -60952394 + MER57A-int LTR ERV1 2849 6540 -997 2232 108 7 0 chr20 11201504 11201801 -60952081 + AluSx SINE Alu 1 299 -13 797 225 31 11 chr20 11201803 11201994 -60951888 + L1ME3A LINE L1 5967 6161 -9 3063 169 47 42 chr20 11202018 11202121 -60951761 + MER57A-int LTR ERV1 6524 6625 -912 1635 178 3 36 chr20 11202121 11202425 -60951457 + AluJb SINE Alu 1 294 -18 3063 169 47 42 chr20 11202425 11202938 -60950944 + MER57A-int LTR ERV1 6625 7143 -394 848 180 254 29 chr20 11202939 11203250 -60950632 + LTR54B LTR ERV1 1 381 -117 493 196 9 9 chr20 11203251 11203358 -60950524 + MER57A-int LTR ERV1 7430 7536 -1 2017 158 15 53 chr20 11203359 11203752 -60950130 + MER57A LTR ERV1 1 378 -25 590 152 0 9 chr20 11203753 11203865 -60950017 + GA-rich Low_complexity Low_complexity 2 112 0 984 266 71 7 chr20 11204149 11204627 -60949255 + MLT1H LTR MaLR 12 542 -7 1075 257 33 7 chr20 11205025 11205301 -60948581 + MLT1H LTR MaLR 1 283 -266 699 227 51 11 chr20 11205318 11205494 -60948388 + MLT1H LTR MaLR 101 283 -266 397 263 51 8 chr20 11205592 11205710 -60948172 + MLT1H LTR MaLR 423 545 -4 1110 170 63 10 chr20 11206583 11206789 -60947093 - MER20 DNA MER1_type 0 219 3 5093 207 15 3 chr20 11206990 11208141 -60945741 - L1 LINE L1 -2579 3567 2403 8831 157 14 5 chr20 11208141 11208724 -60945158 + L1PB1 LINE L1 3524 4100 -2051 1750 120 6 107 chr20 11208724 11209050 -60944832 - AluSx SINE Alu -16 296 4 8831 157 14 5 chr20 11209050 11209353 -60944529 + L1PB1 LINE L1 4100 4399 -1752 201 39 0 0 chr20 11209353 11209379 -60944503 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 8831 157 14 5 chr20 11209379 11211091 -60942791 + L1PB1 LINE L1 4399 6146 -5 821 281 74 17 chr20 11212027 11212380 -60941502 - L1ME2 LINE L1 0 6164 5792 201 154 0 0 chr20 11213795 11213834 -60940048 + (TA)n Simple_repeat Simple_repeat 2 40 0 1062 211 108 87 chr20 11213905 11214441 -60939441 + MER39 LTR ERV1 1 706 -1 690 243 58 52 chr20 11214441 11214744 -60939138 - MLT1H LTR MaLR -19 571 226 493 284 33 84 chr20 11215078 11215300 -60938582 + L2 LINE L2 2997 3198 -115 383 233 65 88 chr20 11215300 11215515 -60938367 - MER63A DNA MER1_type 0 210 1 493 284 33 84 chr20 11215515 11215626 -60938256 + L2 LINE L2 3198 3313 0 231 356 80 15 chr20 11216066 11216513 -60937369 + L2 LINE L2 2528 3010 -262 258 167 0 0 chr20 11216743 11216803 -60937079 + CT-rich Low_complexity Low_complexity 1 60 0 206 348 50 14 chr20 11217013 11217154 -60936728 + L2 LINE L2 1852 1997 -1317 346 109 0 0 chr20 11217170 11217225 -60936657 - L1MB2 LINE L1 -4 6167 6113 358 368 15 0 chr20 11217478 11217614 -60936268 - MIR3 SINE MIR -4 204 67 879 203 35 1 chr20 11217774 11217992 -60935890 - L1MB2 LINE L1 -45 6126 5923 1488 268 30 12 chr20 11218122 11218522 -60935360 - LTR16C LTR ERVL -5 486 80 333 335 86 69 chr20 11218551 11219119 -60934763 + L2 LINE L2 2134 2711 -603 411 306 107 28 chr20 11219226 11219872 -60934010 - L1M4 LINE L1 -2527 3619 2923 4334 227 97 64 chr20 11219872 11220831 -60933051 + Charlie2a DNA MER1_type 467 1394 -1468 2259 105 0 3 chr20 11220831 11221125 -60932757 - AluSc SINE Alu -16 293 1 4334 227 97 64 chr20 11221125 11221612 -60932270 + Charlie2a DNA MER1_type 1394 1864 -998 2495 69 0 0 chr20 11221612 11221915 -60931967 + AluY SINE Alu 1 303 -8 4334 227 97 64 chr20 11221915 11222142 -60931740 + Charlie2a DNA MER1_type 1864 2082 -780 1550 191 6 41 chr20 11222142 11222461 -60931421 + AluJb SINE Alu 1 308 -4 4334 227 97 64 chr20 11222461 11222948 -60930934 + Charlie2a DNA MER1_type 2082 2699 -163 938 215 16 5 chr20 11223033 11223219 -60930663 + AluJb SINE Alu 48 235 -77 752 264 14 28 chr20 11223612 11223824 -60930058 + MER3 DNA MER1_type 1 209 0 638 203 49 114 chr20 11223833 11224202 -60929680 + LTR37B LTR ERV1 122 466 -2 1808 111 121 7 chr20 11224392 11224672 -60929210 + AluSx SINE Alu 1 312 0 281 283 91 0 chr20 11224742 11224841 -60929041 + MIR SINE MIR 149 256 -6 2288 154 24 11 chr20 11224975 11225357 -60928525 + MLT1B LTR MaLR 1 387 -3 994 311 56 0 chr20 11225596 11225902 -60927980 - MLT1H LTR MaLR -214 335 13 522 257 22 15 chr20 11226433 11226569 -60927313 - MER58A DNA MER1_type 0 224 88 822 155 0 0 chr20 11226569 11226685 -60927197 + AluJo/FLAM SINE Alu 5 120 -192 456 160 0 50 chr20 11226685 11226785 -60927097 + AluJ/FRAM SINE Alu 218 312 0 376 227 0 15 chr20 11226865 11226931 -60926951 - MER58A DNA MER1_type -42 65 1 819 206 44 50 chr20 11228593 11228718 -60925164 - MER5A DNA MER1_type -10 179 54 2260 85 3 3 chr20 11228718 11229012 -60924870 + AluSc SINE Alu 3 296 -13 819 206 44 50 chr20 11229012 11229066 -60924816 - MER5A DNA MER1_type -135 54 1 446 272 32 8 chr20 11229078 11229213 -60924669 + MER5B DNA MER1_type 47 178 0 2285 207 72 53 chr20 11230069 11230768 -60923114 - L1ME2 LINE L1 -10 6154 5443 1072 162 5 0 chr20 11230879 11231076 -60922806 + L1PB1 LINE L1 5951 6148 -3 31 20 0 20 chr20 11231076 11231109 -60922773 + AT_rich Low_complexity Low_complexity 1 34 -14 815 129 22 7 chr20 11231109 11231248 -60922634 + L1PA16 LINE L1 6024 6164 -2 31 20 0 20 chr20 11231248 11231263 -60922619 + AT_rich Low_complexity Low_complexity 34 48 0 209 235 353 0 chr20 11231830 11231932 -60921950 + MER5A DNA MER1_type 52 189 0 1372 237 17 10 chr20 11233008 11233308 -60920574 + LTR16C LTR ERVL 187 488 -3 5257 146 27 49 chr20 11233622 11235021 -60918861 + L1PA16 LINE L1 4765 6166 0 329 281 98 58 chr20 11235600 11235824 -60918058 + MER102b DNA MER1_type 95 327 -14 230 377 14 0 chr20 11235893 11235962 -60917920 - L2 LINE L2 0 3272 3203 2125 118 28 23 chr20 11236301 11236692 -60917190 + L1MA3 LINE L1 5913 6305 0 829 306 101 32 chr20 11236801 11237177 -60916705 + LTR16A1 LTR ERVL 45 446 -11 2674 97 85 7 chr20 11238338 11238712 -60915170 + MLT2A1 LTR ERVL 1 345 -99 414 0 0 0 chr20 11238712 11238758 -60915124 + (TA)n Simple_repeat Simple_repeat 2 47 0 2091 114 4 4 chr20 11238762 11239043 -60914839 - AluSx SINE Alu -16 296 16 2674 97 85 7 chr20 11239043 11239075 -60914807 + MLT2A1 LTR ERVL 347 444 0 520 283 85 24 chr20 11239079 11239291 -60914591 + L2 LINE L2 3086 3310 -3 441 256 56 73 chr20 11239660 11239907 -60913975 - MLT1J LTR MaLR -4 535 288 840 172 0 0 chr20 11240112 11240234 -60913648 - FLAM_C SINE Alu -21 122 1 231 297 0 0 chr20 11240280 11240344 -60913538 - MLT1J LTR MaLR -447 64 1 416 272 154 0 chr20 11240344 11240480 -60913402 + MIR SINE MIR 89 245 -17 609 219 158 6 chr20 11241065 11241229 -60912653 + MER5A DNA MER1_type 1 189 0 734 270 75 40 chr20 11241632 11241980 -60911902 - Charlie7 DNA MER1_type -2118 494 135 361 233 34 10 chr20 11242709 11242844 -60911038 - L1ME1 LINE L1 -18 6148 6022 220 310 35 0 chr20 11243057 11243115 -60910767 + L2 LINE L2 3134 3193 -79 380 93 0 0 chr20 11243229 11243283 -60910599 - MLT1H LTR MaLR 0 549 496 475 163 39 137 chr20 11243285 11243438 -60910444 - MER58A DNA MER1_type -1 223 86 292 160 21 160 chr20 11243447 11243541 -60910341 + MLT1A1 LTR MaLR 1 81 -284 1328 137 25 0 chr20 11243541 11243782 -60910100 + L1MA4 LINE L1 6028 6274 -26 829 198 47 6 chr20 11243873 11244045 -60909837 + MLT1A1 LTR MaLR 170 348 -17 441 217 0 0 chr20 11244060 11244143 -60909739 - MER58A DNA MER1_type -24 83 1 365 319 18 9 chr20 11244316 11244429 -60909453 - MLT1J LTR MaLR -278 271 158 1580 238 107 0 chr20 11244844 11245468 -60908414 + L1ME2 LINE L1 5449 6162 -2 389 282 30 30 chr20 11246590 11246721 -60907161 + MIR SINE MIR 23 153 -109 210 344 147 8 chr20 11246843 11247102 -60906780 + L2 LINE L2 1944 2238 -1076 208 233 0 137 chr20 11248192 11248265 -60905617 + MER5A DNA MER1_type 121 183 -6 308 323 74 69 chr20 11249431 11249620 -60904262 - L2 LINE L2 -2 3270 3081 1738 112 62 25 chr20 11249632 11249941 -60903941 + AluSx SINE Alu 1 319 0 4514 129 71 13 chr20 11250302 11251122 -60902760 - L1MA4A LINE L1 -4 6299 5433 1982 146 20 64 chr20 11251477 11251634 -60902248 + MSTB LTR MaLR 41 203 -223 2150 121 0 16 chr20 11251634 11251948 -60901934 + AluSc SINE Alu 1 309 0 1982 146 20 64 chr20 11251948 11252194 -60901688 + MSTB LTR MaLR 203 426 0 234 0 0 0 chr20 11253299 11253325 -60900557 + (A)n Simple_repeat Simple_repeat 1 26 0 52 0 0 0 chr20 11253608 11253660 -60900222 + AT_rich Low_complexity Low_complexity 1 52 0 261 122 0 0 chr20 11253670 11253711 -60900171 - MLT1F LTR MaLR 0 542 502 1895 151 136 18 chr20 11253730 11254113 -60899769 + MSTA LTR MaLR 1 428 0 2095 251 25 2 chr20 11254113 11254628 -60899254 - MLT1F LTR MaLR -15 527 1 325 311 102 28 chr20 11254688 11254865 -60899017 - HAL1b LINE L1 -622 726 537 709 219 173 7 chr20 11254933 11255211 -60898671 - MER5C DNA MER1_type 0 324 1 227 106 43 43 chr20 11255230 11255277 -60898605 + MLT1J LTR MaLR 101 147 -364 2689 96 3 3 chr20 11255412 11255776 -60898106 + THE1B LTR MaLR 1 364 0 992 187 12 32 chr20 11255843 11256089 -60897793 + L1MA9 LINE L1 6067 6307 -5 11872 121 25 12 chr20 11256104 11256216 -60897666 + Tigger1 DNA MER2_type 3 112 -2306 2204 121 10 0 chr20 11256216 11256521 -60897361 - AluSx SINE Alu -4 308 1 11872 121 25 12 chr20 11256521 11258343 -60895539 + Tigger1 DNA MER2_type 112 1963 -455 388 244 0 11 chr20 11258534 11258624 -60895258 + Tigger1 DNA MER2_type 2326 2414 -4 323 291 18 0 chr20 11258764 11258874 -60895008 + LTR67 LTR ERVL 446 557 0 23 89 0 11 chr20 11259172 11259210 -60894672 + AT_rich Low_complexity Low_complexity 1 38 -51 2074 112 0 0 chr20 11259210 11259488 -60894394 - AluSq SINE Alu -18 295 18 23 89 0 11 chr20 11259488 11259539 -60894343 + AT_rich Low_complexity Low_complexity 38 89 0 204 132 0 26 chr20 11259751 11259789 -60894093 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 595 325 42 14 chr20 11260892 11261104 -60892778 - MIR SINE MIR -25 237 20 1771 166 3 17 chr20 11261273 11261569 -60892313 + AluJo SINE Alu 1 292 -20 33 0 0 0 chr20 11261569 11261602 -60892280 + AT_rich Low_complexity Low_complexity 1 33 0 262 155 14 84 chr20 11261646 11261717 -60892165 - L1MC4a LINE L1 -1902 5906 5841 4770 211 66 34 chr20 11261726 11263308 -60890574 + L1MA5 LINE L1 3650 5282 -864 1894 155 31 0 chr20 11263315 11263605 -60890277 + AluJb SINE Alu 11 309 -3 5138 134 19 8 chr20 11263606 11264499 -60889383 + L1MA5 LINE L1 5392 6294 -6 400 296 157 9 chr20 11264766 11265084 -60888798 - LTR33A LTR ERVL -77 446 82 1916 119 7 11 chr20 11265490 11265776 -60888106 - AluSx SINE Alu -1 311 27 351 310 60 71 chr20 11265850 11266399 -60887483 - L1M4 LINE L1 -3212 2934 2392 1209 184 77 45 chr20 11266421 11266757 -60887125 - L1MB8 LINE L1 -1 6177 5831 * 1841 240 45 37 chr20 11266756 11267643 -60886239 - L1MDa LINE L1 -3339 3201 2314 30 45 0 0 chr20 11267958 11268002 -60885880 + AT_rich Low_complexity Low_complexity 1 44 0 1248 278 47 26 chr20 11268028 11268651 -60885231 - L1MDa LINE L1 -4547 1995 1360 606 293 72 26 chr20 11268683 11268990 -60884892 + MLT1K LTR MaLR 259 579 -9 184 159 0 68 chr20 11269240 11269284 -60884598 + L2 LINE L2 1783 1823 -1491 290 351 97 12 chr20 11269385 11269550 -60884332 - L2 LINE L2 0 3272 3094 2218 102 10 0 chr20 11269947 11270241 -60883641 + AluSx SINE Alu 1 297 -15 2011 133 7 13 chr20 11270854 11271156 -60882726 + AluSx SINE Alu 1 300 -12 990 256 185 19 chr20 11271582 11271812 -60882070 + LTR16C LTR ERVL 69 260 -231 1397 190 28 104 chr20 11271812 11272207 -60881675 + MLT1A1 LTR MaLR 1 365 0 2268 120 34 0 chr20 11272212 11272562 -60881320 + THE1B LTR MaLR 1 362 -2 990 256 185 19 chr20 11272562 11272688 -60881194 + LTR16C LTR ERVL 263 491 0 393 349 8 0 chr20 11272806 11272932 -60880950 + MIR SINE MIR 133 259 -3 835 165 0 0 chr20 11273119 11273246 -60880636 + FLAM_C SINE Alu 1 127 -6 438 237 91 56 chr20 11273438 11273670 -60880212 + L2 LINE L2 2953 3192 -121 22 0 0 0 chr20 11274648 11274670 -60879212 + AT_rich Low_complexity Low_complexity 1 22 0 395 205 54 52 chr20 11274853 11274980 -60878902 - Charlie8 DNA MER1_type -2141 276 152 449 293 57 0 chr20 11276264 11276387 -60877495 - L2 LINE L2 0 3272 3143 2250 74 3 14 chr20 11276672 11276982 -60876900 - AluSx SINE Alu 0 307 1 189 195 0 0 chr20 11277673 11277714 -60876168 + CT-rich Low_complexity Low_complexity 2 42 0 800 217 42 0 chr20 11278511 11278700 -60875182 - MER115 DNA AcHobo 0 693 497 192 293 52 0 chr20 11279034 11279092 -60874790 - L3b LINE CR1 -232 1351 1291 207 0 0 0 chr20 11279778 11279801 -60874081 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 186 133 0 0 chr20 11280054 11280084 -60873798 + (TG)n Simple_repeat Simple_repeat 2 31 0 383 176 28 28 chr20 11280110 11280218 -60873664 + LTR67 LTR ERVL 450 557 0 225 263 35 0 chr20 11280218 11280275 -60873607 + L2 LINE L2 3214 3272 0 1879 167 0 0 chr20 11280362 11280655 -60873227 - AluJb SINE Alu -19 293 1 382 290 71 45 chr20 11280685 11281122 -60872760 - L1ME4a LINE L1 -73 6048 5583 1916 148 3 17 chr20 11281122 11281419 -60872463 - AluSx SINE Alu -18 294 2 382 290 71 45 chr20 11281419 11281739 -60872143 - L1ME4a LINE L1 -538 5583 5273 243 279 51 0 chr20 11282124 11282203 -60871679 - L1ME4a LINE L1 -1314 4832 4750 222 237 10 52 chr20 11282238 11282335 -60871547 + C-rich Low_complexity Low_complexity 2 94 0 * 244 302 16 28 chr20 11282286 11282468 -60871414 + (CCA)n Simple_repeat Simple_repeat 1 180 0 330 277 71 22 chr20 11282556 11282740 -60871142 - L1ME4a LINE L1 -1556 4590 4398 33 56 0 0 chr20 11283617 11283671 -60870211 + AT_rich Low_complexity Low_complexity 1 54 0 209 286 114 0 chr20 11283700 11283770 -60870112 + L2 LINE L2 3187 3264 -8 186 292 0 0 chr20 11284015 11284063 -60869819 - L2 LINE L2 -1 3312 3265 491 287 164 60 chr20 11284177 11284706 -60869176 - L2 LINE L2 -338 2976 2393 1527 227 68 20 chr20 11285088 11285529 -60868353 + MLT1C LTR MaLR 6 467 0 427 300 19 44 chr20 11285652 11285811 -60868071 - MIR SINE MIR -66 196 43 181 348 29 14 chr20 11286554 11286623 -60867259 - MIR SINE MIR -104 104 35 243 88 0 0 chr20 11287037 11287071 -60866811 + (CA)n Simple_repeat Simple_repeat 1 34 0 315 190 101 0 chr20 11288246 11288325 -60865557 - MER5A DNA MER1_type -77 112 26 802 316 65 8 chr20 11289736 11290087 -60863795 - LTR16A LTR ERVL -79 371 1 2268 84 19 13 chr20 11291024 11291370 -60862512 + AluSx SINE Alu 1 348 0 1552 273 72 51 chr20 11291455 11291494 -60862388 + HAL1b LINE L1 115 152 -1196 780 231 53 48 chr20 11291494 11291702 -60862180 - MER63A DNA MER1_type 0 210 2 1552 273 72 51 chr20 11291702 11292869 -60861013 + HAL1b LINE L1 152 1346 -2 547 265 34 0 chr20 11292939 11293056 -60860826 + FLAM_A SINE Alu 1 121 -21 21 0 0 0 chr20 11293056 11293077 -60860805 + AT_rich Low_complexity Low_complexity 1 21 0 336 296 33 29 chr20 11293147 11293421 -60860461 + L1MD2 LINE L1 3249 3523 -2623 3406 230 44 64 chr20 11293536 11293705 -60860177 + L1MD2 LINE L1 3533 3704 -2442 518 149 0 0 chr20 11293705 11293779 -60860103 - AluSp SINE Alu -96 217 144 3406 230 44 64 chr20 11293779 11294974 -60858908 + L1MD2 LINE L1 3704 4946 -1200 4450 194 44 23 chr20 11295015 11295251 -60858631 + L1MB3 LINE L1 4018 4248 -1935 183 80 0 0 chr20 11295251 11295276 -60858606 + (CA)n Simple_repeat Simple_repeat 1 25 0 4450 194 44 23 chr20 11295276 11295486 -60858396 + L1MB3 LINE L1 4248 4452 -1731 2121 114 23 3 chr20 11295486 11295661 -60858221 - AluSx SINE Alu -7 305 120 387 0 0 0 chr20 11295661 11295704 -60858178 + (TG)n Simple_repeat Simple_repeat 2 44 0 2121 114 23 3 chr20 11295704 11295827 -60858055 - AluSx SINE Alu -192 120 1 4450 194 44 23 chr20 11295827 11295857 -60858025 + L1MB3 LINE L1 4452 4480 -1703 1986 141 116 38 chr20 11295857 11296254 -60857628 + MSTA LTR MaLR 1 428 0 4450 194 44 23 chr20 11296254 11297909 -60855973 + L1MB3 LINE L1 4480 6183 0 3744 196 53 21 chr20 11297901 11298566 -60855316 + L1MD2 LINE L1 4944 5669 -690 * 1434 199 75 41 chr20 11298566 11298928 -60854954 + MLT1A2 LTR MaLR 1 374 0 3744 196 53 21 chr20 11298928 11299409 -60854473 + L1MD2 LINE L1 5669 6133 -226 260 24 0 71 chr20 11299438 11299480 -60854402 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 429 135 52 0 chr20 11299510 11299606 -60854276 + (TATG)n Simple_repeat Simple_repeat 2 102 0 414 146 37 0 chr20 11299629 11299711 -60854171 + (TA)n Simple_repeat Simple_repeat 1 85 0 210 37 0 0 chr20 11299711 11299738 -60854144 + (GA)n Simple_repeat Simple_repeat 2 28 0 590 200 48 0 chr20 11299739 11299864 -60854018 + L1MD2 LINE L1 6151 6281 -78 690 134 90 0 chr20 11299874 11300008 -60853874 + L1MD1 LINE L1 6091 6236 -6 2062 105 0 0 chr20 11300022 11300289 -60853593 + AluSq SINE Alu 1 267 -46 252 22 43 22 chr20 11300292 11300338 -60853544 + (TAAAA)n Simple_repeat Simple_repeat 4 50 0 905 154 101 0 chr20 11300338 11300487 -60853395 + AluSg/x SINE Alu 131 294 -18 403 338 120 71 chr20 11300519 11300547 -60853335 - L2 LINE L2 -13 3259 3234 1189 166 50 0 chr20 11300547 11300746 -60853136 + MER3 DNA MER1_type 1 209 0 403 338 120 71 chr20 11300746 11301283 -60852599 - L2 LINE L2 -38 3234 2725 1427 183 21 28 chr20 11301283 11301643 -60852239 + AluJo SINE Alu 1 358 0 403 338 120 71 chr20 11301643 11302332 -60851550 - L2 LINE L2 -547 2725 1964 1415 177 40 22 chr20 11302388 11302665 -60851217 + AluJo SINE Alu 1 282 -30 22 0 0 0 chr20 11304076 11304098 -60849784 + AT_rich Low_complexity Low_complexity 1 22 0 306 317 29 9 chr20 11304119 11304273 -60849609 + MIR SINE MIR 19 176 -66 233 252 36 18 chr20 11304377 11304442 -60849440 - MER5A DNA MER1_type -1 188 112 246 267 53 0 chr20 11304544 11304619 -60849263 + LTR16A LTR ERVL 25 103 -347 * 396 262 8 8 chr20 11304615 11304737 -60849145 + LTR16A LTR ERVL 329 450 0 180 378 77 14 chr20 11304944 11305087 -60848795 + L2 LINE L2 2910 3061 -211 200 306 139 56 chr20 11305330 11305438 -60848444 - MIR SINE MIR -109 153 37 21 57 0 0 chr20 11305447 11305482 -60848400 + AT_rich Low_complexity Low_complexity 1 35 0 1849 129 7 3 chr20 11305499 11305794 -60848088 + L1MC1 LINE L1 6037 6332 -1 322 298 11 0 chr20 11306768 11306862 -60847020 + MER68 LTR ERV1 450 544 -18 1363 243 27 17 chr20 11306863 11307275 -60846607 - L1ME3A LINE L1 -114 6056 5641 20669 26 0 0 chr20 11307276 11310511 -60843371 + L1PA2 LINE L1 2921 6155 0 24 0 0 0 chr20 11310511 11310535 -60843347 + AT_rich Low_complexity Low_complexity 1 24 0 785 289 65 31 chr20 11310535 11310826 -60843056 - LTR16C LTR ERVL -122 369 69 908 253 101 27 chr20 11311206 11311574 -60842308 - MLT1J LTR MaLR -109 402 8 623 147 108 0 chr20 11313313 11313415 -60840467 + FRAM SINE Alu 40 152 -24 900 125 0 0 chr20 11313935 11314055 -60839827 + FLAM_C SINE Alu 1 120 -23 775 337 55 37 chr20 11314750 11315186 -60838696 - L2 LINE L2 -449 2865 2422 827 308 56 17 chr20 11315295 11315655 -60838227 - LTR16C LTR ERVL -14 477 104 284 383 42 12 chr20 11316078 11316245 -60837637 + L3 LINE CR1 565 736 -841 352 272 201 38 chr20 11318138 11318322 -60835560 + MIR SINE MIR 48 261 -1 403 301 20 33 chr20 11318612 11318765 -60835117 - MLT1J2 LTR MaLR -298 152 2 24 32 0 0 chr20 11319272 11319303 -60834579 + AT_rich Low_complexity Low_complexity 1 31 0 253 312 21 0 chr20 11319400 11319493 -60834389 - MIR SINE MIR 0 262 168 1390 163 67 50 chr20 11319494 11319851 -60834031 + THE1C LTR MaLR 1 363 -12 587 265 46 0 chr20 11319855 11320006 -60833876 - MIR SINE MIR -90 172 15 585 211 6 43 chr20 11320868 11320935 -60832947 + L1MA10 LINE L1 6172 6240 -94 405 0 0 0 chr20 11320935 11320980 -60832902 + (TG)n Simple_repeat Simple_repeat 1 45 0 585 211 6 43 chr20 11320980 11321073 -60832809 + L1MA10 LINE L1 6240 6326 -8 1850 174 93 86 chr20 11321483 11321857 -60832025 + LTR8A LTR ERV1 1 382 -345 2231 100 0 13 chr20 11321857 11322157 -60831725 - AluY SINE Alu -14 297 2 1850 174 93 86 chr20 11322157 11322361 -60831521 + LTR8A LTR ERV1 382 583 -144 1437 180 102 29 chr20 11322361 11322813 -60831069 + LTR10A LTR ERV1 1 548 -61 688 175 6 81 chr20 11322826 11322986 -60830896 + LTR8A LTR ERV1 580 727 0 3994 273 78 28 chr20 11322993 11323051 -60830831 + L1M4b LINE L1 12 66 -6789 189 107 0 0 chr20 11323051 11323079 -60830803 + (TA)n Simple_repeat Simple_repeat 1 28 0 3994 273 78 28 chr20 11323079 11324699 -60829183 + L1M4b LINE L1 66 1775 -5080 2075 162 15 74 chr20 11324692 11325216 -60828666 + L1MC2 LINE L1 5815 6307 -37 * 505 267 59 16 chr20 11325456 11325643 -60828239 + L1ME3A LINE L1 5717 5911 -259 192 119 48 71 chr20 11325968 11325979 -60827903 + L3 LINE CR1 1534 1574 -3 205 97 0 0 chr20 11325979 11326010 -60827872 + MIR3 SINE MIR 171 201 -7 1611 155 59 41 chr20 11326514 11326804 -60827078 - AluJo SINE Alu -17 295 1 372 267 63 111 chr20 11326943 11327066 -60826816 + MLT1J LTR MaLR 43 170 -315 1607 186 0 35 chr20 11327066 11327378 -60826504 - AluJo SINE Alu -11 301 1 372 267 63 111 chr20 11327378 11327524 -60826358 + MLT1J LTR MaLR 170 338 -147 189 147 0 0 chr20 11328023 11328057 -60825825 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 277 39 39 39 chr20 11328239 11328290 -60825592 + (CAAAA)n Simple_repeat Simple_repeat 4 54 0 1521 255 91 43 chr20 11328520 11328583 -60825299 + MLT1H1 LTR MaLR 1 60 -495 2216 111 3 0 chr20 11328583 11328871 -60825011 + AluSq SINE Alu 4 292 -21 1521 255 91 43 chr20 11328871 11329337 -60824545 + MLT1H1 LTR MaLR 60 555 0 200 31 62 0 chr20 11331324 11331356 -60822526 + T-rich Low_complexity Low_complexity 1 34 0 11415 30 0 1 chr20 11331359 11333478 -60820404 - L1PA4 LINE L1 -3 6152 4034 2744 96 0 0 chr20 11333934 11334298 -60819584 + THE1B LTR MaLR 1 364 0 319 281 31 10 chr20 11334475 11334571 -60819311 + L3 LINE CR1 1476 1573 -4 686 219 30 35 chr20 11334937 11335138 -60818744 + MER3 DNA MER1_type 9 208 -1 831 214 171 70 chr20 11336207 11336622 -60817260 - LTR16A1 LTR ERVL 0 457 1 283 214 14 57 chr20 11336976 11337046 -60816836 + L2 LINE L2 3247 3313 0 694 205 0 0 chr20 11337079 11337226 -60816656 - FLAM_A SINE Alu 0 147 1 2214 103 63 23 chr20 11337540 11337890 -60815992 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr20 11337972 11338001 -60815881 + AT_rich Low_complexity Low_complexity 1 29 0 408 71 0 0 chr20 11338621 11338677 -60815205 + (TG)n Simple_repeat Simple_repeat 2 57 0 1051 207 163 3 chr20 11339262 11339635 -60814247 + Charlie4a DNA MER1_type 75 504 -4 2666 82 18 32 chr20 11339828 11339870 -60814012 - THE1C LTR MaLR 0 375 334 2373 89 0 0 chr20 11339870 11340172 -60813710 + AluY SINE Alu 1 302 -9 2666 82 18 32 chr20 11340172 11340509 -60813373 - THE1C LTR MaLR -41 334 1 216 359 58 81 chr20 11340509 11340548 -60813334 + L2 LINE L2 3040 3078 -194 2434 144 23 28 chr20 11340548 11340984 -60812898 + Tigger2a DNA MER2_type 1 434 0 216 359 58 81 chr20 11340984 11341167 -60812715 + L2 LINE L2 3078 3257 -15 207 299 68 77 chr20 11341698 11341815 -60812067 - L2 LINE L2 -1 3271 3156 1163 318 36 5 chr20 11341878 11342321 -60811561 - LTR16C LTR ERVL 0 491 35 332 254 28 42 chr20 11342423 11342565 -60811317 - L1MEc LINE L1 -3411 2804 2665 692 271 59 45 chr20 11342590 11343239 -60810643 - L1MEc LINE L1 -3616 2599 1978 21 36 0 0 chr20 11343292 11343320 -60810562 + AT_rich Low_complexity Low_complexity 1 28 0 481 322 124 0 chr20 11343321 11343563 -60810319 - L1MEc LINE L1 -4579 1817 1546 2335 75 0 0 chr20 11343660 11343940 -60809942 + AluY SINE Alu 1 280 -31 183 42 0 0 chr20 11343943 11343967 -60809915 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 348 307 91 17 chr20 11344649 11344825 -60809057 - L3b LINE CR1 -99 1484 1296 212 119 0 24 chr20 11345066 11345108 -60808774 + (TTC)n Simple_repeat Simple_repeat 1 41 0 309 217 14 0 chr20 11345154 11345223 -60808659 + MLT1J1 LTR MaLR 26 95 -351 746 169 0 0 chr20 11345302 11345440 -60808442 - FRAM SINE Alu 0 165 28 266 328 39 8 chr20 11345440 11345568 -60808314 + MLT1J2 LTR MaLR 97 228 -222 417 256 66 29 chr20 11345604 11345741 -60808141 + MLT1J2 LTR MaLR 291 432 -18 385 226 0 65 chr20 11345777 11345870 -60808012 + MIR SINE MIR 12 98 -164 302 241 48 12 chr20 11345889 11345972 -60807910 + MLT1J2 LTR MaLR 339 424 -26 2147 171 55 25 chr20 11346842 11347281 -60806601 + MLT1C LTR MaLR 16 467 0 267 276 71 0 chr20 11347283 11347381 -60806501 + MIR SINE MIR 142 246 -16 245 290 70 30 chr20 11347563 11347663 -60806219 - L3b LINE CR1 -339 1244 1141 460 312 65 5 chr20 11347773 11347972 -60805910 + LTR33 LTR ERVL 10 220 -301 867 158 26 7 chr20 11347976 11348128 -60805754 - FRAM SINE Alu -9 167 13 300 337 86 0 chr20 11348201 11348376 -60805506 + LTR33 LTR ERVL 332 521 0 775 328 52 27 chr20 11348383 11348786 -60805096 - LTR16C LTR ERVL -6 485 73 257 292 146 27 chr20 11349283 11349468 -60804414 - L2 LINE L2 0 3313 3107 356 88 18 0 chr20 11349471 11349528 -60804354 + (TG)n Simple_repeat Simple_repeat 2 59 0 848 232 17 25 chr20 11351958 11352199 -60801683 - LTR16C LTR ERVL 0 491 253 2412 93 3 3 chr20 11352327 11352639 -60801243 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 11354085 11354107 -60799775 + AT_rich Low_complexity Low_complexity 1 22 0 180 230 180 70 chr20 11354360 11354460 -60799422 + MIR SINE MIR 31 141 -67 213 121 0 0 chr20 11355035 11355068 -60798814 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr20 11355835 11355856 -60798026 + AT_rich Low_complexity Low_complexity 1 21 0 402 39 0 0 chr20 11355878 11355930 -60797952 + (TG)n Simple_repeat Simple_repeat 2 53 0 2389 246 87 18 chr20 11356007 11357042 -60796840 - L1ME3A LINE L1 -5 6165 5052 665 159 40 7 chr20 11357481 11357632 -60796250 - MER3 DNA MER1_type 0 2585 2430 399 193 12 0 chr20 11357633 11357716 -60796166 - MER3 DNA MER1_type -95 114 31 448 242 222 7 chr20 11357813 11357966 -60795916 + MER5A DNA MER1_type 1 186 -3 464 254 24 16 chr20 11358421 11358547 -60795335 + L2 LINE L2 3187 3313 0 407 344 56 0 chr20 11358759 11358884 -60794998 + L2 LINE L2 3182 3313 0 357 207 35 35 chr20 11359381 11359468 -60794414 - MER94 DNA DNA -29 105 19 180 0 0 0 chr20 11361138 11361158 -60792724 + (T)n Simple_repeat Simple_repeat 1 20 0 932 238 60 31 chr20 11361555 11361715 -60792167 - L1ME3 LINE L1 -181 5981 5827 1818 173 3 0 chr20 11361715 11362004 -60791878 + AluJb SINE Alu 2 291 -21 932 238 60 31 chr20 11362004 11362194 -60791688 - L1ME3 LINE L1 -335 5827 5595 430 273 72 22 chr20 11362491 11362630 -60791252 + Charlie8 DNA MER1_type 87 232 -2185 1888 160 7 13 chr20 11363301 11363601 -60790281 + AluJo SINE Alu 1 298 -14 654 381 34 16 chr20 11364264 11364880 -60789002 - HERV16 LTR ERVL -3421 1575 949 2587 146 27 2 chr20 11364880 11365326 -60788556 + LTR32 LTR ERVL 15 471 0 762 218 46 60 chr20 11366550 11366766 -60787116 + MER20 DNA MER1_type 6 218 -1 808 269 40 54 chr20 11366818 11367130 -60786752 + L1ME LINE L1 5311 5615 -555 579 239 9 0 chr20 11367130 11367239 -60786643 - MER81 DNA DNA -1 113 4 808 269 40 54 chr20 11367239 11367446 -60786436 + L1ME LINE L1 5615 5823 -347 1747 152 0 92 chr20 11368056 11368392 -60785490 - AluJb SINE Alu -7 305 1 1522 174 85 0 chr20 11368706 11368988 -60784894 - AluJb SINE Alu -2 310 5 875 247 136 59 chr20 11369074 11369580 -60784302 + MLT1H LTR MaLR 4 548 -1 266 354 75 12 chr20 11369800 11369983 -60783899 + MIR SINE MIR 10 204 -58 250 295 39 0 chr20 11370019 11370097 -60783785 + MIR SINE MIR 176 256 -6 1032 281 60 45 chr20 11370144 11370628 -60783254 + LTR16C LTR ERVL 1 491 0 399 318 164 44 chr20 11372123 11372789 -60781093 + L2 LINE L2 2560 3313 0 329 333 66 61 chr20 11373191 11373389 -60780493 + L2 LINE L2 3052 3250 -22 1724 223 43 3 chr20 11373389 11373780 -60780102 + MER82 DNA MER2_type 1 407 -246 22 35 0 0 chr20 11373907 11373936 -60779946 + AT_rich Low_complexity Low_complexity 1 29 0 5839 152 17 3 chr20 11374041 11375740 -60778142 + L1MA4 LINE L1 4577 6295 -5 7558 34 0 0 chr20 11376231 11377636 -60776246 + L1PA5 LINE L1 4741 6147 -7 232 0 0 0 chr20 11377705 11377741 -60776141 + L1HS LINE L1 6120 6155 0 1852 167 3 7 chr20 11378386 11378691 -60775191 + AluJb SINE Alu 1 304 -8 291 238 48 67 chr20 11378832 11378937 -60774945 + MIR SINE MIR 49 151 -111 180 77 0 0 chr20 11379105 11379131 -60774751 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2207 104 0 22 chr20 11379187 11379504 -60774378 - AluSx SINE Alu -2 310 1 776 216 202 18 chr20 11381806 11382148 -60771734 + Charlie4a DNA MER1_type 25 429 -79 2521 194 24 6 chr20 11382169 11382701 -60771181 + L1MB5 LINE L1 5625 6166 -8 2431 79 0 19 chr20 11382950 11383267 -60770615 + AluSx SINE Alu 1 311 -1 822 254 103 151 chr20 11383801 11383922 -60769960 - L2 LINE L2 -350 2964 2839 1941 84 25 4 chr20 11383922 11384221 -60769661 + AluY SINE Alu 1 305 0 822 254 103 151 chr20 11384221 11384329 -60769553 - L2 LINE L2 -475 2839 2727 1860 126 32 3 chr20 11384329 11384614 -60769268 - AluSx SINE Alu -17 295 3 822 254 103 151 chr20 11384614 11385032 -60768850 - L2 LINE L2 -587 2727 2346 232 239 0 91 chr20 11385038 11385126 -60768756 + MLT1H LTR MaLR 8 87 -462 1111 255 104 12 chr20 11385983 11386387 -60767495 + MER69 DNA AcHobo 1 441 -785 1406 130 8 4 chr20 11386389 11386635 -60767247 + L1MA2 LINE L1 6058 6304 0 25 0 0 0 chr20 11386635 11386660 -60767222 + AT_rich Low_complexity Low_complexity 1 25 0 2324 219 65 29 chr20 11386868 11387801 -60766081 + MER69 DNA AcHobo 1457 2423 -103 1285 61 0 0 chr20 11388262 11388425 -60765457 + L1PA8 LINE L1 6005 6167 -5 2385 199 71 43 chr20 11388910 11389228 -60764654 - L1MC4a LINE L1 -470 7338 7030 267 79 0 0 chr20 11389228 11389266 -60764616 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2385 199 71 43 chr20 11389266 11389587 -60764295 - L1MC4a LINE L1 -778 7030 6674 1640 187 36 33 chr20 11389587 11389951 -60763931 + MLT1A1 LTR MaLR 1 365 0 2385 199 71 43 chr20 11389951 11390025 -60763857 - L1MC4a LINE L1 -1134 6674 6604 1227 206 77 36 chr20 11390059 11390301 -60763581 + L1MD3 LINE L1 7570 7835 -160 791 221 101 29 chr20 11390301 11390509 -60763373 + MER58A DNA MER1_type 1 223 -1 1227 206 77 36 chr20 11390509 11390654 -60763228 + L1MD3 LINE L1 7835 7973 -22 1377 96 0 6 chr20 11390654 11390831 -60763051 + AluY SINE Alu 118 293 -18 370 262 9 0 chr20 11390844 11390951 -60762931 + Charlie8 DNA MER1_type 62 169 -2248 457 246 116 101 chr20 11390999 11391345 -60762537 + MLT1J LTR MaLR 8 358 -153 1178 143 71 25 chr20 11391403 11391599 -60762283 + AluJb SINE Alu 95 299 -13 32 26 0 0 chr20 11391736 11391775 -60762107 + AT_rich Low_complexity Low_complexity 1 39 0 1387 159 72 4 chr20 11392815 11393092 -60760790 - MER33 DNA MER1_type -22 302 7 443 172 97 30 chr20 11393973 11394107 -60759775 - L1ME4a LINE L1 -5 6116 5974 260 390 25 8 chr20 11394648 11394766 -60759116 - L2 LINE L2 -15 3257 3138 491 97 10 40 chr20 11394873 11394967 -60758915 - L1MA9 LINE L1 -35 6256 6162 2059 146 7 0 chr20 11394968 11395329 -60758553 - AluSx SINE Alu 0 363 1 182 36 0 36 chr20 11395474 11395502 -60758380 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 318 106 0 0 chr20 11396120 11396167 -60757715 + (CA)n Simple_repeat Simple_repeat 2 48 0 376 299 48 0 chr20 11396713 11396860 -60757022 + L1ME1 LINE L1 439 592 -6015 1408 238 12 56 chr20 11396912 11397324 -60756558 + L1ME1 LINE L1 590 983 -5624 916 120 0 23 chr20 11397325 11397458 -60756424 + AluSq/x SINE Alu 1 130 -183 2170 117 3 0 chr20 11397487 11397785 -60756097 - AluSp SINE Alu -14 299 1 482 289 39 26 chr20 11397785 11398017 -60755865 + L1ME1 LINE L1 1347 1581 -5026 509 227 81 38 chr20 11398017 11398202 -60755680 - MER95 LTR ERV 0 431 239 585 293 57 7 chr20 11398409 11398692 -60755190 + L1ME1 LINE L1 1404 1700 -4726 * 1546 211 65 12 chr20 11398673 11399173 -60754709 + L1ME1 LINE L1 2387 2868 -3558 3168 218 16 57 chr20 11399212 11399445 -60754437 + L1ME1 LINE L1 5576 5817 -629 2241 88 0 7 chr20 11399445 11399765 -60754117 + AluSc SINE Alu 1 318 0 3168 218 16 57 chr20 11399765 11400392 -60753490 + L1ME1 LINE L1 5817 6402 -44 225 0 0 0 chr20 11400403 11400428 -60753454 + (TG)n Simple_repeat Simple_repeat 2 26 0 612 221 16 0 chr20 11400469 11400596 -60753286 - MER3 DNA MER1_type -74 135 7 723 253 128 43 chr20 11402013 11402318 -60751564 + MLT1H LTR MaLR 25 355 -194 233 246 15 0 chr20 11402371 11402436 -60751446 + MLT1J2 LTR MaLR 363 428 -22 250 196 0 0 chr20 11402490 11402536 -60751346 + MIR3 SINE MIR 139 184 -24 242 292 0 0 chr20 11402810 11402875 -60751007 + GA-rich Low_complexity Low_complexity 3 67 0 476 321 6 22 chr20 11403071 11403251 -60750631 + MIR SINE MIR 30 205 -57 1695 176 0 28 chr20 11404670 11405030 -60748852 + AluJo SINE Alu 1 351 0 1757 226 43 14 chr20 11405366 11405857 -60748025 + MLT1D LTR MaLR 1 505 0 444 260 21 0 chr20 11407246 11407342 -60746540 - MER5A DNA MER1_type -80 109 12 495 204 2 0 chr20 11408030 11408134 -60745748 - L1ME3 LINE L1 -20 6150 6044 583 183 147 63 chr20 11408135 11408326 -60745556 + MER3 DNA MER1_type 3 209 0 14591 35 0 1 chr20 11408363 11410139 -60743743 + L1P LINE L1 3083 4857 -1289 735 217 15 40 chr20 11410209 11410301 -60743581 - L1ME3 LINE L1 -25 6137 6044 742 174 117 61 chr20 11410301 11410497 -60743385 + MER3 DNA MER1_type 3 209 0 735 217 15 40 chr20 11410497 11410602 -60743280 - L1ME3 LINE L1 -118 6044 5945 227 191 24 0 chr20 11411274 11411316 -60742566 + MER5C DNA MER1_type 34 76 -248 221 301 14 0 chr20 11411452 11411525 -60742357 - MER5C DNA MER1_type -250 74 1 27 49 0 0 chr20 11411931 11411972 -60741910 + AT_rich Low_complexity Low_complexity 1 41 0 487 313 115 58 chr20 11412141 11412575 -60741307 - LTR67 LTR ERVL -4 553 95 217 232 28 160 chr20 11413478 11413659 -60740223 - L2 LINE L2 -10 3303 3147 217 409 44 10 chr20 11413686 11413889 -60739993 - L2 LINE L2 -252 3061 2852 548 280 54 6 chr20 11413938 11414106 -60739776 - L2 LINE L2 -579 2735 2560 627 127 28 4 chr20 11414110 11414233 -60739649 + L1MA5 LINE L1 6164 6294 -3 1449 221 91 47 chr20 11414312 11414827 -60739055 + MLT1H LTR MaLR 12 549 0 1021 183 14 10 chr20 11415409 11415617 -60738265 + LTR16A1 LTR ERVL 247 455 -2 2935 170 55 86 chr20 11415754 11416467 -60737415 - LTR8 LTR ERV1 0 691 1 326 272 167 0 chr20 11417502 11417664 -60736218 + L2 LINE L2 3120 3308 -5 945 188 54 89 chr20 11418026 11418362 -60735520 + MER33 DNA MER1_type 1 324 0 1542 271 30 12 chr20 11418402 11418808 -60735074 + LTR16C LTR ERVL 79 491 0 534 251 79 54 chr20 11420105 11420308 -60733574 - MER63A DNA MER1_type -1 209 2 477 158 79 10 chr20 11421072 11421173 -60732709 - MER5A DNA MER1_type -38 151 44 1813 157 0 7 chr20 11422244 11422524 -60731358 - AluSx SINE Alu 0 312 35 1752 169 14 35 chr20 11422919 11423286 -60730596 + L1MA10 LINE L1 4439 4797 -1349 372 224 26 26 chr20 11423290 11423406 -60730476 + L1MA9 LINE L1 6167 6282 -30 371 203 0 40 chr20 11423416 11423490 -60730392 - L1MC3 LINE L1 -652 7133 7063 4996 185 24 34 chr20 11423499 11425052 -60728830 + L1MA10 LINE L1 4793 6333 -1 2175 226 60 83 chr20 11425290 11426182 -60727700 - L1MC4 LINE L1 0 8042 7171 261 315 44 19 chr20 11426687 11426860 -60727022 + MLT1I LTR MaLR 273 401 -8 419 250 152 8 chr20 11427089 11427221 -60726661 - MER63A DNA MER1_type -2 208 58 453 225 45 9 chr20 11427415 11427526 -60726356 + L1ME3A LINE L1 5651 5765 -405 2357 96 0 0 chr20 11427526 11427829 -60726053 + AluSc SINE Alu 1 303 -6 248 232 40 0 chr20 11427829 11427928 -60725954 + (TA)n Simple_repeat Simple_repeat 2 104 0 240 208 30 0 chr20 11427941 11428042 -60725840 + (TA)n Simple_repeat Simple_repeat 2 105 0 304 226 118 54 chr20 11428050 11428143 -60725739 + L1MC4 LINE L1 6613 6711 -1331 960 213 96 60 chr20 11428150 11428484 -60725398 + L1ME3A LINE L1 5791 6136 -34 343 296 235 26 chr20 11428959 11429189 -60724693 + L2 LINE L2 3016 3293 -20 1216 132 13 9 chr20 11429363 11429582 -60724300 + L1PA16 LINE L1 5668 5886 -280 262 146 0 0 chr20 11429793 11429834 -60724048 - L1PA11 LINE L1 -9 6165 6125 965 134 56 0 chr20 11429836 11430058 -60723824 + L1PA16 LINE L1 5894 6157 -9 2097 125 0 25 chr20 11430085 11430405 -60723477 + AluSx SINE Alu 1 312 0 23 0 0 0 chr20 11430507 11430530 -60723352 + AT_rich Low_complexity Low_complexity 1 23 0 2497 284 69 14 chr20 11431550 11432403 -60721479 - L2 LINE L2 -1522 1792 893 350 266 26 88 chr20 11432680 11432793 -60721089 - MIR3 SINE MIR -28 180 80 369 192 13 0 chr20 11432852 11432930 -60720952 - MER116 DNA Mariner -1 79 1 1733 159 7 45 chr20 11432996 11433305 -60720577 - AluJb SINE Alu -15 297 1 1737 176 7 3 chr20 11433350 11433646 -60720236 + AluJb SINE Alu 10 306 -6 437 267 50 0 chr20 11434414 11434534 -60719348 + LTR16C LTR ERVL 147 272 -219 1810 44 0 9 chr20 11434821 11435047 -60718835 - L1PA5 LINE L1 0 6154 5931 599 285 84 0 chr20 11435319 11435498 -60718384 - MIR SINE MIR -48 214 21 1918 222 126 35 chr20 11435913 11436290 -60717592 + L1ME2 LINE L1 5441 5782 -382 1732 101 7 47 chr20 11436290 11436568 -60717314 + AluY SINE Alu 45 311 0 1918 222 126 35 chr20 11436568 11436848 -60717034 + L1ME2 LINE L1 5782 6158 -6 186 71 0 0 chr20 11437117 11437145 -60716737 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 546 301 75 19 chr20 11437656 11437869 -60716013 - MIR SINE MIR -18 244 20 320 273 239 17 chr20 11437898 11438012 -60715870 - L2 LINE L2 0 3313 3226 1892 199 127 40 chr20 11438012 11438530 -60715352 + MLT1F1 LTR MaLR 1 563 -4 320 273 239 17 chr20 11438530 11438653 -60715229 - L2 LINE L2 -87 3226 3023 413 209 0 55 chr20 11438661 11438752 -60715130 + FLAM_A SINE Alu 1 86 -56 253 314 43 71 chr20 11438769 11438841 -60715041 - L2 LINE L2 -1366 1948 1875 2347 119 28 0 chr20 11438841 11439195 -60714687 + THE1B LTR MaLR 1 364 0 253 314 43 71 chr20 11439195 11439332 -60714550 - L2 LINE L2 -1439 1875 1745 1538 227 0 3 chr20 11439818 11440122 -60713760 - AluJo SINE Alu -9 303 1 31 26 0 0 chr20 11440934 11440972 -60712910 + AT_rich Low_complexity Low_complexity 1 38 0 273 188 71 24 chr20 11442079 11442164 -60711718 - Charlie7 DNA MER1_type -25 2587 2499 2093 257 67 36 chr20 11443078 11443909 -60709973 + L2 LINE L2 2250 3096 -217 417 253 0 0 chr20 11444029 11444120 -60709762 - MER104 DNA Tc2 -89 91 1 337 333 91 38 chr20 11444232 11444418 -60709464 - L2 LINE L2 -1 3271 3076 2214 110 3 22 chr20 11444501 11444820 -60709062 - AluSp SINE Alu 0 313 1 376 269 39 105 chr20 11445808 11446113 -60707769 - L2 LINE L2 -880 2434 2150 205 200 0 0 chr20 11446366 11446406 -60707476 + A-rich Low_complexity Low_complexity 1 40 0 287 327 10 0 chr20 11447580 11447684 -60706198 - MLT1L LTR MaLR -165 450 346 248 185 19 19 chr20 11447792 11447846 -60706036 - LTR67 LTR ERVL -405 152 99 377 236 135 1 chr20 11448090 11448223 -60705659 - L1ME2 LINE L1 0 6164 6016 285 292 0 0 chr20 11448747 11448819 -60705063 - MIR SINE MIR -120 142 71 416 346 28 11 chr20 11448835 11449017 -60704865 + L2 LINE L2 2837 3021 -292 262 173 96 0 chr20 11449118 11449170 -60704712 + MIR SINE MIR 90 146 -116 366 23 0 0 chr20 11449204 11449247 -60704635 + (TG)n Simple_repeat Simple_repeat 2 44 0 1097 152 33 6 chr20 11449256 11449529 -60704353 + MER63 DNA MER1_type 1 974 -86 1652 174 24 0 chr20 11452094 11452381 -60701501 - AluJo SINE Alu -16 296 3 397 340 82 42 chr20 11452558 11453008 -60700874 + L2 LINE L2 2013 2480 -834 270 324 95 56 chr20 11453421 11453705 -60700177 + L2 LINE L2 2920 3214 -58 302 0 0 0 chr20 11455071 11455108 -60698774 - L1PA8 LINE L1 -807 5339 5303 6262 75 4 4 chr20 11455108 11455936 -60697946 + L1PA8 LINE L1 5336 6165 -7 250 355 152 15 chr20 11455938 11456273 -60697609 - L2 LINE L2 -2216 1098 718 280 232 43 0 chr20 11457134 11457203 -60696679 + L2 LINE L2 3241 3312 -1 517 312 144 40 chr20 11457644 11458428 -60695454 - L2 LINE L2 -12 3301 2430 3542 30 0 0 chr20 11458454 11458899 -60694983 - L1P2 LINE L1 -480 5674 5230 2793 44 0 0 chr20 11458899 11459236 -60694646 + L1PA5 LINE L1 5809 6147 -7 183 100 0 0 chr20 11459267 11459297 -60694585 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 876 309 215 38 chr20 11459299 11460374 -60693508 - L2 LINE L2 -907 2407 1098 869 191 11 37 chr20 11460374 11460562 -60693320 + MER5A DNA MER1_type 4 186 -3 876 309 215 38 chr20 11460562 11460681 -60693201 - L2 LINE L2 -2216 1098 1001 324 334 169 20 chr20 11460947 11461291 -60692591 + L3 LINE CR1 829 1223 -354 1111 171 6 0 chr20 11461375 11461551 -60692331 + AluSc SINE Alu 131 307 -2 26 30 0 0 chr20 11462902 11462935 -60690947 + AT_rich Low_complexity Low_complexity 1 33 0 228 134 15 45 chr20 11463059 11463126 -60690756 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 21 36 0 0 chr20 11463168 11463196 -60690686 + AT_rich Low_complexity Low_complexity 1 28 0 258 105 0 0 chr20 11464481 11464519 -60689363 + (TATATG)n Simple_repeat Simple_repeat 1 38 0 499 240 212 7 chr20 11465645 11465791 -60688091 + MER5A DNA MER1_type 14 189 0 182 328 0 45 chr20 11465814 11465881 -60688001 + MER5A DNA MER1_type 39 102 -87 1750 207 22 5 chr20 11465945 11466346 -60687536 + L1MB7 LINE L1 4784 5191 -955 852 166 0 14 chr20 11466351 11466496 -60687386 + FLAM_C SINE Alu 1 143 0 4332 154 28 33 chr20 11466502 11467436 -60686446 + L1MB7 LINE L1 5185 6110 -74 1949 140 7 0 chr20 11467562 11467717 -60686165 - AluSx SINE Alu -25 287 128 243 0 0 0 chr20 11467717 11467744 -60686138 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1949 140 7 0 chr20 11467744 11467873 -60686009 - AluSx SINE Alu -184 128 1 2542 196 33 4 chr20 11468355 11468846 -60685036 - MLT1D LTR MaLR 0 505 1 317 313 90 17 chr20 11468935 11469190 -60684692 + L1ME LINE L1 5473 5749 -415 645 266 149 34 chr20 11469192 11469347 -60684535 + MLT1J2 LTR MaLR 1 137 -313 261 0 0 0 chr20 11469347 11469376 -60684506 + (TAA)n Simple_repeat Simple_repeat 2 30 0 645 266 149 34 chr20 11469376 11469569 -60684313 + MLT1J2 LTR MaLR 137 389 -61 2595 173 99 24 chr20 11469903 11470488 -60683394 + L1MB7 LINE L1 5556 6184 0 266 264 11 65 chr20 11470745 11470863 -60683019 + MER5B DNA MER1_type 7 129 -60 180 354 0 31 chr20 11470890 11470986 -60682896 - L3 LINE CR1 -565 1012 920 279 285 208 0 chr20 11471697 11471827 -60682055 + MER5B DNA MER1_type 1 157 -21 1225 197 104 7 chr20 11471875 11472154 -60681728 + AluJb SINE Alu 1 306 -6 374 169 24 0 chr20 11472417 11472500 -60681382 + (CATA)n Simple_repeat Simple_repeat 2 86 0 322 301 73 15 chr20 11473435 11473571 -60680311 + MIR SINE MIR 25 168 -94 284 214 29 14 chr20 11473681 11473751 -60680131 - L2 LINE L2 -9 3304 3234 1934 223 74 67 chr20 11473753 11474282 -60679600 + L1ME1 LINE L1 5175 5713 -453 1469 141 11 0 chr20 11474282 11474551 -60679331 + L1MA4 LINE L1 6029 6300 0 1934 223 74 67 chr20 11474551 11474929 -60678953 + L1ME1 LINE L1 5713 6087 -79 1167 212 111 12 chr20 11475100 11475524 -60678358 + L1ME3A LINE L1 5665 6160 -10 322 336 49 30 chr20 11475532 11475862 -60678020 - L2 LINE L2 -208 3105 2717 953 233 28 31 chr20 11476029 11476346 -60677536 - HsTC2 DNA Tc2 -4 1894 1579 2560 139 21 16 chr20 11476432 11476862 -60677020 - MSTB1 LTR MaLR 0 432 1 274 125 0 0 chr20 11477767 11477807 -60676075 + LTR56 LTR ERV1 349 388 -57 26 0 0 0 chr20 11477807 11477833 -60676049 + AT_rich Low_complexity Low_complexity 1 26 0 197 240 0 20 chr20 11477833 11477883 -60675999 + MIR SINE MIR 136 184 -78 2234 190 102 39 chr20 11477922 11478399 -60675483 + MLT2B1 LTR ERVL 1 414 0 784 167 0 0 chr20 11478585 11478705 -60675177 + FLAM_A SINE Alu 1 120 -13 27 49 0 0 chr20 11478716 11478757 -60675125 + AT_rich Low_complexity Low_complexity 1 41 0 181 263 75 0 chr20 11478923 11479003 -60674879 - MIR SINE MIR -4 258 173 * 368 261 89 64 chr20 11478987 11479190 -60674692 - L2 LINE L2 0 3313 3106 224 365 65 6 chr20 11479215 11479385 -60674497 - MIR SINE MIR -81 181 2 2178 159 27 12 chr20 11479667 11480069 -60673813 + MER31A LTR ERV1 61 468 -17 517 296 18 84 chr20 11481156 11481430 -60672452 + MLT1K LTR MaLR 13 268 -320 375 328 21 6 chr20 11482115 11482273 -60671609 + MIR SINE MIR 25 183 -62 751 292 133 15 chr20 11482291 11482626 -60671256 - MLT1J2 LTR MaLR -8 442 53 21 36 0 0 chr20 11482939 11482967 -60670915 + AT_rich Low_complexity Low_complexity 1 28 0 2972 136 57 73 chr20 11483180 11483811 -60670071 - LTR29 LTR ERV1 0 622 2 882 175 16 58 chr20 11483980 11484169 -60669713 - MER5A DNA MER1_type -8 181 1 1150 321 22 34 chr20 11484180 11484685 -60669197 + L2 LINE L2 2813 3311 -2 647 237 27 82 chr20 11486185 11486404 -60667478 - MER63A DNA MER1_type -3 207 1 1592 259 133 8 chr20 11486421 11486895 -60666987 + MLT1H LTR MaLR 14 546 -3 376 363 47 12 chr20 11487161 11487332 -60666550 + L2 LINE L2 2849 3025 -288 518 209 92 12 chr20 11487403 11487566 -60666316 - Charlie5 DNA MER1_type 0 2620 2445 2002 212 32 13 chr20 11487575 11488037 -60665845 + L1MD2 LINE L1 5673 6143 -216 260 256 11 44 chr20 11488036 11488126 -60665756 + L1MD1 LINE L1 6079 6165 -77 * 787 240 112 16 chr20 11488245 11488478 -60665404 - MIR SINE MIR 0 262 15 276 111 22 0 chr20 11488784 11488829 -60665053 - L2 LINE L2 -4 3309 3264 333 355 61 43 chr20 11488893 11488977 -60664905 + L1MC4a LINE L1 5529 5610 -2198 2037 146 77 8 chr20 11488977 11489340 -60664542 + MLT1B LTR MaLR 3 390 0 333 355 61 43 chr20 11489340 11489582 -60664300 + L1MC4a LINE L1 5610 5861 -1947 345 323 45 23 chr20 11489825 11490045 -60663837 - L2 LINE L2 -515 2799 2575 522 342 41 24 chr20 11490302 11490597 -60663285 - L2 LINE L2 -449 2865 2566 1221 215 138 38 chr20 11490598 11490783 -60663099 + MLT1D LTR MaLR 1 166 -339 1971 119 9 55 chr20 11490783 11491110 -60662772 + AluSx SINE Alu 1 312 0 1221 215 138 38 chr20 11491110 11491382 -60662500 + MLT1D LTR MaLR 166 505 0 316 309 100 36 chr20 11491415 11491716 -60662166 - L2 LINE L2 -778 2536 2217 667 157 0 0 chr20 11493403 11493518 -60660364 - L1MB3 LINE L1 -8 6175 6061 764 265 46 14 chr20 11493747 11493966 -60659916 - MIR SINE MIR -22 240 15 361 258 187 7 chr20 11494589 11494744 -60659138 - LTR33 LTR ERVL -311 210 28 591 293 41 62 chr20 11495042 11495284 -60658598 + MIR SINE MIR 21 257 -5 267 271 141 0 chr20 11495755 11495840 -60658042 - MER103 DNA DNA -68 98 2 294 255 20 31 chr20 11496339 11496410 -60657472 + MIR SINE MIR 96 167 -95 2886 208 25 18 chr20 11496410 11496964 -60656918 + MER68 LTR ERV1 3 560 -2 294 255 20 31 chr20 11496964 11496990 -60656892 + MIR SINE MIR 167 192 -70 607 283 206 28 chr20 11498014 11498474 -60655408 - MLT1H LTR MaLR -7 542 1 420 228 138 42 chr20 11498980 11499169 -60654713 - L2 LINE L2 -10 3303 3097 2449 63 0 7 chr20 11499170 11499470 -60654412 + AluY SINE Alu 1 298 -13 223 302 81 0 chr20 11499610 11499696 -60654186 - MIR SINE MIR -123 139 47 252 277 134 18 chr20 11499943 11500055 -60653827 - MIR SINE MIR -4 258 134 285 176 140 118 chr20 11500130 11500266 -60653616 - MLT1J2 LTR MaLR 0 450 366 371 277 73 59 chr20 11500289 11500509 -60653373 - MLT1I LTR MaLR -123 286 64 204 269 0 0 chr20 11501378 11501471 -60652411 + (TA)n Simple_repeat Simple_repeat 2 94 0 1887 76 15 23 chr20 11502638 11502901 -60650981 + L1P2 LINE L1 5395 5655 -500 4420 114 14 163 chr20 11502901 11504491 -60649391 + pTR5 LTR ERV1 743 2606 0 4353 38 0 10 chr20 11504491 11504996 -60648886 + L1PA4 LINE L1 5652 6151 -4 1140 178 0 0 chr20 11506353 11506533 -60647349 - MER5A DNA MER1_type 0 189 10 221 338 27 0 chr20 11506799 11506873 -60647009 - L3 LINE CR1 -1089 488 413 771 237 68 0 chr20 11506904 11507081 -60646801 - MER5A DNA MER1_type 0 189 1 22 0 0 0 chr20 11507481 11507503 -60646379 + AT_rich Low_complexity Low_complexity 1 22 0 363 225 83 31 chr20 11507557 11507762 -60646120 + Charlie1 DNA MER1_type 1 244 -2517 1463 174 14 33 chr20 11507763 11508039 -60645843 + AluJo SINE Alu 14 284 -28 590 120 112 16 chr20 11508044 11508169 -60645713 + Charlie1 DNA MER1_type 2624 2760 -1 323 345 22 21 chr20 11509434 11509667 -60644215 - L2 LINE L2 -307 3006 2777 288 351 54 43 chr20 11512006 11512191 -60641691 - MIR SINE MIR -64 198 12 245 371 0 11 chr20 11512283 11512372 -60641510 - MIR3 SINE MIR -54 154 67 1849 242 74 42 chr20 11513330 11513900 -60639982 - MLT1E LTR MaLR -2 591 4 847 236 43 119 chr20 11513909 11514635 -60639247 - MLT1E-int LTR MaLR -25 1710 692 928 236 61 15 chr20 11514866 11515265 -60638617 - MLT1E-int LTR MaLR -791 580 48 788 194 49 93 chr20 11515265 11515436 -60638446 + MLT1B LTR MaLR 1 159 -231 783 147 0 91 chr20 11515436 11515579 -60638303 + FLAM_C SINE Alu 4 133 0 788 194 49 93 chr20 11515579 11515654 -60638228 + MLT1B LTR MaLR 159 236 -154 360 78 0 20 chr20 11515647 11515698 -60638184 + MLT1B LTR MaLR 340 389 -1 * 325 160 0 0 chr20 11515699 11515749 -60638133 - MLT1E-int LTR MaLR -1319 52 3 996 191 115 68 chr20 11515751 11516003 -60637879 - MLT1E LTR MaLR 0 593 330 469 319 103 7 chr20 11515993 11516275 -60637607 - LTR16C LTR ERVL -94 397 89 * 276 311 238 8 chr20 11516379 11516501 -60637381 - L2 LINE L2 -1 3271 3122 744 222 51 37 chr20 11516684 11516900 -60636982 + MIR SINE MIR 2 220 -42 2364 106 0 0 chr20 11517130 11517442 -60636440 + AluSx SINE Alu 1 312 0 1475 213 164 65 chr20 11518211 11518737 -60635145 - MER119 DNA MER1_type 0 583 6 186 174 0 0 chr20 11518770 11518816 -60635066 + T-rich Low_complexity Low_complexity 1 46 0 1091 172 11 6 chr20 11519314 11519488 -60634394 + FAM SINE Alu 1 175 0 239 234 0 11 chr20 11519913 11520007 -60633875 + (TGG)n Simple_repeat Simple_repeat 2 94 0 381 267 114 34 chr20 11520224 11520400 -60633482 - MIR SINE MIR -59 203 14 586 273 107 27 chr20 11521013 11521313 -60632569 - L1ME LINE L1 -527 5639 5316 2170 159 6 15 chr20 11522196 11522536 -60631346 - MER1B DNA MER1_type 0 337 1 742 224 93 0 chr20 11522605 11522788 -60631094 + MER3 DNA MER1_type 2 201 -8 255 212 45 0 chr20 11522742 11522808 -60631074 - MER3 DNA MER1_type -106 103 35 * 814 271 46 57 chr20 11522981 11523369 -60630513 - LTR16A1 LTR ERVL -2 455 72 21 0 0 0 chr20 11523633 11523654 -60630228 + AT_rich Low_complexity Low_complexity 1 21 0 363 44 0 0 chr20 11524070 11524115 -60629767 + (TC)n Simple_repeat Simple_repeat 2 46 0 26 0 0 0 chr20 11524138 11524164 -60629718 + AT_rich Low_complexity Low_complexity 1 26 0 209 319 43 32 chr20 11524761 11524855 -60629027 - L2 LINE L2 -41 3272 3178 190 315 70 49 chr20 11525036 11525179 -60628703 + L3 LINE CR1 1106 1251 -326 390 335 65 40 chr20 11525207 11525485 -60628397 + L3 LINE CR1 1178 1462 -115 1963 148 30 0 chr20 11525834 11526137 -60627745 + AluJb SINE Alu 1 312 0 2350 91 0 26 chr20 11526344 11526653 -60627229 + AluSg SINE Alu 1 301 -9 2590 59 0 0 chr20 11527203 11527507 -60626375 + AluY SINE Alu 2 305 -6 214 211 70 42 chr20 11527648 11527719 -60626163 - MER5A DNA MER1_type -28 161 89 411 273 175 0 chr20 11528403 11528557 -60625325 + MER5A DNA MER1_type 8 188 -1 278 339 165 27 chr20 11528639 11528863 -60625019 + MIR SINE MIR 2 256 -6 786 253 155 43 chr20 11528930 11529421 -60624461 + MLT1H1 LTR MaLR 10 555 0 245 250 19 0 chr20 11529482 11529534 -60624348 + MER58A DNA MER1_type 1 53 -171 2998 157 26 4 chr20 11529549 11530052 -60623830 - L1MC1 LINE L1 0 6333 5820 8476 156 51 23 chr20 11530053 11531894 -60621988 - L1MCa LINE L1 -4415 2011 29 792 223 18 18 chr20 11531903 11532069 -60621813 + MER58A DNA MER1_type 43 208 -16 368 296 227 29 chr20 11532082 11532322 -60621560 - L2 LINE L2 -49 3264 3073 3014 126 5 5 chr20 11532322 11532750 -60621132 + MSTA LTR MaLR 1 428 0 368 296 227 29 chr20 11532750 11532884 -60620998 - L2 LINE L2 -240 3073 2816 573 293 59 13 chr20 11533062 11533298 -60620584 - LTR16A1 LTR ERVL -12 445 199 1105 237 87 82 chr20 11533298 11533847 -60620035 - MER34B LTR ERV1 0 565 14 748 235 55 102 chr20 11533925 11534308 -60619574 - MLT1A1 LTR MaLR 0 365 1 246 197 0 33 chr20 11536680 11536741 -60617141 - L1MC4 LINE L1 0 8042 7984 2073 169 34 20 chr20 11536812 11537168 -60616714 + MLT1A1 LTR MaLR 1 361 -4 1656 167 29 36 chr20 11537203 11537509 -60616373 - AluJb SINE Alu -5 307 4 1336 242 74 18 chr20 11537516 11538010 -60615872 - L1MC4 LINE L1 -98 7710 7180 671 242 127 53 chr20 11538217 11538539 -60615343 - L1ME3A LINE L1 0 6170 5825 2882 146 12 5 chr20 11538607 11539032 -60614850 - MSTA LTR MaLR 0 428 1 2029 128 0 3 chr20 11539119 11539409 -60614473 - AluSx SINE Alu -22 290 2 376 322 61 28 chr20 11539455 11539635 -60614247 - MIR SINE MIR -28 234 49 667 312 149 14 chr20 11539762 11540111 -60613771 + LTR16C LTR ERVL 96 491 0 300 297 17 42 chr20 11540446 11540564 -60613318 + MIR SINE MIR 15 129 -133 2432 173 51 7 chr20 11540576 11541009 -60612873 - LTR32 LTR ERVL 0 471 20 250 299 0 10 chr20 11541021 11541118 -60612764 + MIR SINE MIR 131 226 -36 430 229 243 7 chr20 11541155 11541299 -60612583 + MIR SINE MIR 12 189 -73 2102 73 0 0 chr20 11542714 11543013 -60610869 - AluSc SINE Alu 0 332 34 300 165 66 104 chr20 11543043 11543160 -60610722 - MLT1I LTR MaLR 0 409 316 280 252 117 29 chr20 11543516 11543619 -60610263 + MIR SINE MIR 79 190 -72 4507 200 38 16 chr20 11544520 11546202 -60607680 + L1MB4 LINE L1 4458 6180 0 6393 87 17 8 chr20 11546206 11547094 -60606788 + L1PA10 LINE L1 5260 6156 -12 1346 243 84 6 chr20 11547101 11547527 -60606355 - MLT1H LTR MaLR -57 492 5 371 309 111 19 chr20 11547814 11547976 -60605906 - MIR3 SINE MIR -13 195 19 391 273 11 0 chr20 11548066 11548154 -60605728 + MER5A DNA MER1_type 9 97 -92 502 211 35 56 chr20 11548235 11548377 -60605505 - MER5B DNA MER1_type -4 174 36 2656 49 0 0 chr20 11548396 11548702 -60605180 - AluY SINE Alu -5 306 1 252 86 0 0 chr20 11549931 11549966 -60603916 + (TATATG)n Simple_repeat Simple_repeat 6 40 0 233 178 0 0 chr20 11549967 11550012 -60603870 - LTR66 LTR ERVL -172 438 394 239 258 0 0 chr20 11550012 11550074 -60603808 + (TA)n Simple_repeat Simple_repeat 2 63 0 3165 142 55 6 chr20 11550217 11550711 -60603171 - LTR44 LTR ERV1 0 519 2 674 224 160 0 chr20 11550720 11550876 -60603006 - MER5A DNA MER1_type 0 189 9 463 221 188 13 chr20 11550902 11551051 -60602831 - MER5B DNA MER1_type -3 175 1 351 65 0 0 chr20 11551204 11551250 -60602632 + (GA)n Simple_repeat Simple_repeat 1 46 0 358 44 0 0 chr20 11551364 11551409 -60602473 - L1P4 LINE L1 -564 5601 5557 954 82 54 7 chr20 11551410 11551614 -60602268 + L1PA8 LINE L1 5931 6162 0 1710 170 3 17 chr20 11551739 11552039 -60601843 - AluJo SINE Alu -16 296 1 327 321 0 0 chr20 11552471 11552577 -60601305 - L1ME3 LINE L1 -2 6160 6055 234 146 24 0 chr20 11552577 11552618 -60601264 - MER3 DNA MER1_type -160 49 8 237 242 0 16 chr20 11552618 11552680 -60601202 - L1ME3 LINE L1 -150 6012 5952 683 220 5 52 chr20 11552725 11552916 -60600966 - L1PB4 LINE L1 -25 6131 5950 455 282 84 23 chr20 11553764 11553993 -60599889 + MIR SINE MIR 19 260 -2 811 198 178 41 chr20 11554503 11554700 -60599182 - MER58A DNA MER1_type 0 224 1 361 183 14 0 chr20 11554708 11554779 -60599103 - Charlie5 DNA MER1_type -27 2585 2514 1357 167 101 40 chr20 11554787 11555063 -60598819 + AluJo SINE Alu 1 293 -19 1531 136 4 0 chr20 11555167 11555395 -60598487 + AluSq SINE Alu 81 309 -4 232 188 71 18 chr20 11557088 11557200 -60596682 + (TA)n Simple_repeat Simple_repeat 1 118 0 449 245 185 0 chr20 11557306 11557457 -60596425 + MER5A DNA MER1_type 11 189 0 254 234 19 37 chr20 11557462 11557569 -60596313 - L1ME4a LINE L1 -77 6044 5940 375 378 25 10 chr20 11557938 11558142 -60595740 - MIR SINE MIR -3 259 53 274 289 163 22 chr20 11559653 11559788 -60594094 + MIR3 SINE MIR 19 172 -36 2293 89 0 0 chr20 11560446 11560755 -60593127 + AluSg SINE Alu 1 309 0 6149 198 103 73 chr20 11561052 11562379 -60591503 + L1MC3 LINE L1 5782 7269 -516 268 298 0 12 chr20 11562379 11562463 -60591419 + MLT1F1 LTR MaLR 49 131 -436 6149 198 103 73 chr20 11562463 11562997 -60590885 + L1MC3 LINE L1 7269 7785 0 195 250 56 0 chr20 11563001 11563073 -60590809 + MER5C DNA MER1_type 235 310 -14 22 0 0 0 chr20 11563708 11563730 -60590152 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr20 11566708 11566733 -60587149 + AT_rich Low_complexity Low_complexity 1 25 0 397 308 43 0 chr20 11566816 11566933 -60586949 - MIR SINE MIR -63 145 24 207 273 0 0 chr20 11567633 11567677 -60586205 + (TG)n Simple_repeat Simple_repeat 1 44 0 271 235 295 18 chr20 11568143 11568309 -60585573 - MIR SINE MIR -1 261 50 989 213 23 32 chr20 11568498 11568719 -60585163 - MER20 DNA MER1_type 0 219 1 666 289 68 5 chr20 11568749 11568939 -60584943 + MIR SINE MIR 12 213 -49 495 293 87 34 chr20 11569007 11569215 -60584667 - MIR SINE MIR -19 243 25 257 269 343 0 chr20 11569592 11569700 -60584182 + MIR SINE MIR 20 164 -98 934 189 30 0 chr20 11569702 11569866 -60584016 + FRAM SINE Alu 1 168 -8 687 328 9 4 chr20 11573225 11573454 -60580428 + MIR SINE MIR 33 262 0 369 273 110 16 chr20 11574844 11575050 -60578832 - MIR SINE MIR -1 261 38 182 250 104 0 chr20 11575017 11575065 -60578817 - MIR SINE MIR -133 129 77 * 1134 265 152 7 chr20 11575415 11575823 -60578059 + L2 LINE L2 1907 2373 -941 411 82 0 33 chr20 11575824 11575885 -60577997 - MLT1F LTR MaLR 0 542 484 1738 210 109 61 chr20 11575906 11576196 -60577686 - MLT1F LTR MaLR -13 529 254 201 39 0 0 chr20 11576196 11576222 -60577660 + (TTA)n Simple_repeat Simple_repeat 2 27 0 959 170 14 14 chr20 11576224 11576371 -60577511 - FRAM SINE Alu -19 147 1 1738 210 109 61 chr20 11576371 11576582 -60577300 - MLT1F LTR MaLR -288 254 1 1220 264 138 25 chr20 11576582 11577444 -60576438 + L2 LINE L2 2370 3313 0 709 218 128 11 chr20 11577477 11577656 -60576226 + MER3 DNA MER1_type 2 201 -8 219 274 0 0 chr20 11577774 11577825 -60576057 - L2 LINE L2 -5 3267 3217 523 255 176 14 chr20 11579340 11579556 -60574326 - MIR SINE MIR -11 251 1 352 259 140 97 chr20 11579684 11580035 -60573847 - L1ME4a LINE L1 -2 6119 5754 34 84 0 0 chr20 11580102 11580185 -60573697 + AT_rich Low_complexity Low_complexity 1 83 0 685 284 132 19 chr20 11580207 11580718 -60573164 - L1ME4a LINE L1 -293 5828 5255 352 318 85 79 chr20 11582708 11583037 -60570845 - L2 LINE L2 -9 3263 2933 377 316 200 0 chr20 11583037 11583192 -60570690 - MER5A DNA MER1_type 0 189 4 383 174 19 11 chr20 11584083 11584178 -60569704 + MER5A DNA MER1_type 35 131 -47 343 280 48 97 chr20 11584270 11584395 -60569487 - MIR SINE MIR -33 229 114 1990 149 0 7 chr20 11584395 11584683 -60569199 + AluJo SINE Alu 1 286 -26 343 280 48 97 chr20 11584683 11584743 -60569139 - MIR SINE MIR -148 114 53 1831 127 4 4 chr20 11585274 11585541 -60568341 - AluSx SINE Alu -9 303 37 263 295 116 0 chr20 11586093 11586205 -60567677 + MIR SINE MIR 50 174 -88 232 329 0 37 chr20 11586465 11586547 -60567335 - MIR SINE MIR -106 156 78 2030 129 0 14 chr20 11586642 11586937 -60566945 + AluSx SINE Alu 1 291 -21 343 70 0 0 chr20 11586942 11587049 -60566833 + Alu SINE Alu 241 347 0 759 285 93 40 chr20 11587813 11588283 -60565599 - LTR33 LTR ERVL -9 512 1 263 224 47 56 chr20 11588661 11588768 -60565114 - L1ME4a LINE L1 0 6121 6016 1009 229 130 80 chr20 11588910 11589433 -60564449 - MLT1H LTR MaLR 0 549 1 693 288 88 63 chr20 11589846 11590211 -60563671 - L2 LINE L2 -2 3311 2938 1292 245 160 17 chr20 11590437 11590937 -60562945 - MLT1G1 LTR MaLR -2 553 1 3051 174 82 35 chr20 11590966 11591645 -60562237 + L1MD2 LINE L1 5388 6098 -261 447 48 145 0 chr20 11591646 11591708 -60562174 + MADE1 DNA Mariner 2 72 -8 423 200 0 42 chr20 11591708 11591803 -60562079 + LTR16C LTR ERVL 274 364 -127 509 249 138 27 chr20 11591815 11592030 -60561852 + L1MD2 LINE L1 6108 6350 -9 1709 181 7 23 chr20 11592030 11592340 -60561542 + AluJo SINE Alu 1 305 -7 511 227 9 0 chr20 11592880 11592990 -60560892 + Charlie8 DNA MER1_type 86 196 -2221 325 303 25 33 chr20 11593031 11593153 -60560729 + LTR16C LTR ERVL 4 124 -367 722 224 7 0 chr20 11593175 11593327 -60560555 - MER5A DNA MER1_type -5 184 32 270 0 0 0 chr20 11594295 11594325 -60559557 + (CA)n Simple_repeat Simple_repeat 2 31 0 2826 124 51 24 chr20 11595001 11595454 -60558428 - MER4C LTR ERV1 0 465 1 872 10 0 0 chr20 11596577 11596675 -60557207 + L1PA3 LINE L1 6054 6151 -4 361 256 12 12 chr20 11596815 11596901 -60556981 - MER81 DNA DNA 0 114 29 394 158 0 13 chr20 11597219 11597295 -60556587 - MER5A DNA MER1_type -85 104 30 750 234 16 10 chr20 11597488 11597680 -60556202 + MIR SINE MIR 55 247 -15 1477 226 92 25 chr20 11597681 11598114 -60555768 - MLT1C LTR MaLR 0 467 6 202 286 29 43 chr20 11599045 11599115 -60554767 - L2 LINE L2 -4 3309 3241 410 276 86 12 chr20 11602576 11602739 -60551143 + MIR SINE MIR 18 192 -70 713 313 91 43 chr20 11602757 11602989 -60550893 - L2 LINE L2 -19 3294 3075 1748 174 52 33 chr20 11602989 11603357 -60550525 - THE1C LTR MaLR 0 375 1 713 313 91 43 chr20 11603357 11603613 -60550269 - L2 LINE L2 -238 3075 2787 2448 77 0 0 chr20 11604021 11604319 -60549563 + AluY SINE Alu 1 298 -13 1092 276 71 31 chr20 11604358 11604810 -60549072 + L1ME3 LINE L1 5658 6127 -35 718 159 44 0 chr20 11604817 11604930 -60548952 + FLAM_A SINE Alu 2 119 -14 207 139 0 0 chr20 11605952 11605988 -60547894 + (A)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr20 11607986 11608007 -60545875 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 3624 83 6 4 chr20 11608007 11608479 -60545403 - L1PA7 LINE L1 -11 6143 5668 653 276 37 28 chr20 11609699 11609913 -60543969 - LTR16C LTR ERVL 0 491 276 1472 150 0 17 chr20 11610370 11610610 -60543272 - MER46A DNA MER2_type 0 236 1 239 240 0 0 chr20 11610627 11610677 -60543205 + (CA)n Simple_repeat Simple_repeat 2 51 0 352 250 19 48 chr20 11610689 11610793 -60543089 + L2 LINE L2 3201 3301 -12 1374 174 166 13 chr20 11610885 11611265 -60542617 - Charlie4a DNA MER1_type -24 484 47 2566 53 0 3 chr20 11611409 11611713 -60542169 - AluY SINE Alu -8 303 1 217 281 148 8 chr20 11611839 11611985 -60541897 - MIR SINE MIR -31 231 66 352 298 25 25 chr20 11612015 11612173 -60541709 - MER5A DNA MER1_type -24 165 8 2653 194 70 26 chr20 11615798 11616427 -60537455 + L1ME2 LINE L1 5474 6135 -29 3501 139 39 7 chr20 11616427 11616717 -60537165 - L1MA4A LINE L1 -5 6298 6019 324 48 0 0 chr20 11616717 11616759 -60537123 + (CA)n Simple_repeat Simple_repeat 2 43 0 3501 139 39 7 chr20 11616759 11617066 -60536816 - L1MA4A LINE L1 -284 6019 5682 2653 194 70 26 chr20 11617066 11617095 -60536787 + L1ME2 LINE L1 6135 6161 -3 494 136 34 11 chr20 11617096 11617184 -60536698 - L1ME3A LINE L1 -52 6118 6029 342 303 114 0 chr20 11617708 11617840 -60536042 - MIR SINE MIR -86 176 30 317 267 0 0 chr20 11617922 11617997 -60535885 + L1ME3A LINE L1 6045 6119 -51 * 486 233 116 0 chr20 11617995 11618142 -60535740 + L1MA10 LINE L1 6005 6327 -7 316 247 129 0 chr20 11618165 11618250 -60535632 - L1MC4 LINE L1 -1339 6703 6608 459 212 68 27 chr20 11618271 11618417 -60535465 + MER113 DNA MER1_type? 297 448 -73 26 0 0 0 chr20 11618774 11618800 -60535082 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr20 11618857 11618878 -60535004 + AT_rich Low_complexity Low_complexity 1 21 0 417 270 147 0 chr20 11619551 11619714 -60534168 + MIR SINE MIR 49 235 -27 182 227 0 0 chr20 11619687 11619731 -60534151 + L2 LINE L2 3213 3256 -16 * 1134 245 46 23 chr20 11620125 11620431 -60533451 + MER46C DNA MER2_type 4 316 -22 204 67 0 0 chr20 11620431 11620461 -60533421 + (T)n Simple_repeat Simple_repeat 1 30 0 551 261 55 40 chr20 11620536 11620735 -60533147 + MER112 DNA MER1_type 1 202 -58 1474 179 181 33 chr20 11620745 11621175 -60532707 - Charlie4a DNA MER1_type -10 498 5 534 183 157 0 chr20 11621965 11622080 -60531802 + FLAM_A SINE Alu 1 133 0 459 277 88 0 chr20 11622310 11622447 -60531435 + LTR16C LTR ERVL 147 295 -196 190 228 35 0 chr20 11622992 11623049 -60530833 + MIR SINE MIR 89 147 -115 288 91 0 0 chr20 11623066 11623110 -60530772 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 2429 162 18 49 chr20 11623496 11623990 -60529892 + LTR55 LTR ERV 1 479 -69 295 180 101 22 chr20 11624015 11624104 -60529778 + MER5A DNA MER1_type 17 112 -77 327 96 0 0 chr20 11624442 11624494 -60529388 + (CA)n Simple_repeat Simple_repeat 2 53 0 346 303 7 26 chr20 11626488 11626640 -60527242 + GA-rich Low_complexity Low_complexity 3 151 0 1548 178 0 68 chr20 11627297 11627618 -60526264 + AluJo SINE Alu 1 299 -13 22 0 0 0 chr20 11629090 11629112 -60524770 + GC_rich Low_complexity Low_complexity 1 22 0 273 313 14 61 chr20 11631381 11631528 -60522354 - MIR SINE MIR -50 212 73 198 0 0 0 chr20 11632129 11632151 -60521731 + (TC)n Simple_repeat Simple_repeat 1 22 0 249 57 0 0 chr20 11635040 11635075 -60518807 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2095 106 0 4 chr20 11635076 11635350 -60518532 - AluSg SINE Alu -36 274 2 286 259 129 0 chr20 11639178 11639263 -60514619 + MER5A DNA MER1_type 11 106 -83 309 240 78 39 chr20 11639419 11639548 -60514334 + MER5B DNA MER1_type 36 169 -9 380 253 0 0 chr20 11639740 11639827 -60514055 + MIR SINE MIR 99 185 -77 456 227 25 17 chr20 11640177 11640296 -60513586 - MER5A DNA MER1_type -66 123 4 1075 171 97 52 chr20 11640344 11640534 -60513348 - MER33 DNA MER1_type -2261 324 113 5395 134 28 29 chr20 11640534 11641457 -60512425 - MER49 LTR ERV1 -1 922 1 1075 171 97 52 chr20 11641457 11641576 -60512306 - MER33 DNA MER1_type -2472 113 1 1026 191 179 52 chr20 11641691 11642015 -60511867 - MLT1A1 LTR MaLR 0 365 1 325 259 129 62 chr20 11642353 11642546 -60511336 + MLT1K LTR MaLR 277 482 -106 2116 119 14 3 chr20 11642590 11642884 -60510998 + AluSg SINE Alu 1 297 -13 260 326 126 0 chr20 11643348 11643443 -60510439 + L2 LINE L2 3137 3243 -29 455 276 44 61 chr20 11643671 11643899 -60509983 + L2 LINE L2 2921 3144 -169 538 218 16 16 chr20 11643910 11644034 -60509848 - MER104 DNA Tc2 -4 176 53 973 219 11 0 chr20 11644479 11644666 -60509216 - MER5A DNA MER1_type 0 189 1 1320 284 98 50 chr20 11645118 11645855 -60508027 + L2 LINE L2 27 798 -2516 893 281 121 40 chr20 11645847 11646005 -60507877 + L2 LINE L2 1715 1859 -1455 * 1195 201 81 44 chr20 11646005 11646388 -60507494 + MLT2C1 LTR ERVL 1 397 0 893 281 121 40 chr20 11646388 11646590 -60507292 + L2 LINE L2 1859 2116 -1198 1931 148 3 35 chr20 11646590 11646908 -60506974 - AluJo SINE Alu -4 308 1 893 281 121 40 chr20 11646908 11646966 -60506916 + L2 LINE L2 2116 2168 -1146 1775 209 64 56 chr20 11646966 11647450 -60506432 - LTR42 LTR ERVL 0 495 8 268 225 195 117 chr20 11647458 11647608 -60506274 + L2 LINE L2 2164 2301 -1013 1312 208 56 31 chr20 11647608 11647896 -60505986 - AluJo SINE Alu -17 295 1 2241 172 25 15 chr20 11647897 11648305 -60505577 + MLT2D LTR ERVL 3 414 0 268 225 195 117 chr20 11648305 11648383 -60505499 + L2 LINE L2 2300 2412 -902 243 299 95 14 chr20 11648441 11648588 -60505294 + MLT1J LTR MaLR 348 506 -5 687 135 117 0 chr20 11648629 11648740 -60505142 - FRAM SINE Alu -25 151 28 1107 269 151 15 chr20 11648740 11649204 -60504678 + L2 LINE L2 2433 2959 -355 544 261 122 46 chr20 11649217 11649676 -60504206 - MLT1J LTR MaLR -5 506 13 758 250 77 57 chr20 11649765 11650303 -60503579 + MLT1H1 LTR MaLR 1 555 0 994 317 160 21 chr20 11650305 11650825 -60503057 - L2 LINE L2 -494 2820 2229 1018 259 76 15 chr20 11651772 11652169 -60501713 + LTR16C LTR ERVL 71 491 0 1299 258 21 6 chr20 11652590 11652919 -60500963 - MER58B DNA MER1_type -4 337 4 1338 122 0 39 chr20 11653180 11653408 -60500474 - AluSg/x SINE Alu 0 305 86 182 175 0 25 chr20 11653699 11653739 -60500143 + MIR SINE MIR 111 149 -113 372 94 0 0 chr20 11653839 11653892 -60499990 + (TG)n Simple_repeat Simple_repeat 1 53 0 1881 196 57 102 chr20 11653897 11654576 -60499306 + MLT1E1 LTR MaLR 6 654 0 378 304 103 11 chr20 11654836 11655020 -60498862 - L2 LINE L2 -1279 2035 1835 287 253 40 0 chr20 11655020 11655095 -60498787 + L1M4 LINE L1 4832 4909 -1237 2695 172 26 6 chr20 11655139 11656000 -60497882 + L1M4 LINE L1 4906 5784 -400 498 332 57 22 chr20 11656302 11656531 -60497351 - MIR SINE MIR -18 244 8 324 202 34 76 chr20 11657155 11657274 -60496608 - L1ME3 LINE L1 -3 6159 6046 1324 195 52 50 chr20 11657275 11657696 -60496186 - Charlie1 DNA MER1_type 0 2761 2340 403 236 78 59 chr20 11657808 11658046 -60495836 - L1ME3 LINE L1 -174 5988 5650 486 240 38 82 chr20 11658046 11658229 -60495653 - FAM SINE Alu 0 175 1 403 236 78 59 chr20 11658229 11658304 -60495578 - L1ME3 LINE L1 -512 5650 5578 335 125 0 16 chr20 11658762 11658826 -60495056 + (GGA)n Simple_repeat Simple_repeat 3 65 0 343 180 120 114 chr20 11659075 11659242 -60494640 - MLT1H LTR MaLR 0 549 382 1376 113 5 0 chr20 11659386 11659599 -60494283 - Tigger4(Zombi) DNA MER2_type 0 2731 2518 2312 114 7 0 chr20 11659708 11660015 -60493867 + AluSx SINE Alu 1 309 -3 1388 207 24 27 chr20 11660186 11660514 -60493368 + MER87 LTR ERV1 215 541 0 180 370 0 19 chr20 11662481 11662589 -60491293 - L2 LINE L2 -1034 2280 2175 693 217 5 33 chr20 11662836 11663020 -60490862 + MER104 DNA MER2_type 2 180 0 25 0 0 0 chr20 11663783 11663808 -60490074 + AT_rich Low_complexity Low_complexity 1 25 0 252 232 18 0 chr20 11664309 11664365 -60489517 - MIR3 SINE MIR -41 167 111 665 237 102 0 chr20 11666243 11666405 -60487477 + MER5A DNA MER1_type 4 184 -5 588 231 15 0 chr20 11667668 11667798 -60486084 - MER94 DNA DNA -2 132 1 270 0 0 0 chr20 11670351 11670381 -60483501 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2263 78 7 7 chr20 11670827 11671121 -60482761 - AluSc SINE Alu -15 294 1 180 0 0 0 chr20 11671782 11671802 -60482080 + (A)n Simple_repeat Simple_repeat 1 20 0 685 227 43 6 chr20 11672680 11672843 -60481039 - MER5A DNA MER1_type -1 188 20 719 267 87 41 chr20 11673233 11673999 -60479883 - L1ME3 LINE L1 -561 5560 2890 249 91 0 23 chr20 11674217 11674261 -60479621 + L1MA4A LINE L1 6080 6122 -181 * 363 205 29 10 chr20 11674250 11674360 -60479522 + L1MA4A LINE L1 6044 6280 -2 2289 114 0 7 chr20 11674703 11675010 -60478872 - AluSx SINE Alu -7 305 1 566 258 150 0 chr20 11675335 11675575 -60478307 + LTR16A1 LTR ERVL 178 453 -4 2224 119 10 0 chr20 11675776 11676079 -60477803 + AluSx SINE Alu 1 306 -6 24 32 0 0 chr20 11676081 11676112 -60477770 + AT_rich Low_complexity Low_complexity 1 31 0 692 179 74 0 chr20 11676514 11676676 -60477206 + L1MB3 LINE L1 5991 6164 -19 190 0 32 32 chr20 11677601 11677632 -60476250 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 36369 83 8 9 chr20 11677632 11683767 -60470115 - L1PA6 LINE L1 -16 6138 11 647 142 108 42 chr20 11684945 11685065 -60468817 - FLAM_C SINE Alu -15 128 1 2323 115 0 0 chr20 11685683 11685995 -60467887 - AluSx SINE Alu 0 312 1 716 236 81 8 chr20 11686176 11686422 -60467460 + MLT1H LTR MaLR 35 298 -251 336 292 91 19 chr20 11686479 11686633 -60467249 + MLT1H LTR MaLR 384 548 -1 1903 149 4 4 chr20 11688921 11689196 -60464686 + AluSx SINE Alu 1 275 -37 21 36 0 0 chr20 11689606 11689634 -60464248 + AT_rich Low_complexity Low_complexity 1 28 0 2213 229 52 13 chr20 11690649 11691264 -60462618 + L1MC4a LINE L1 7170 7808 0 489 291 162 32 chr20 11691850 11692190 -60461692 - L3 LINE CR1 -50 1527 1144 300 194 117 29 chr20 11693182 11693285 -60460597 + MIR SINE MIR 90 201 -61 340 285 108 23 chr20 11693847 11693977 -60459905 + L2 LINE L2 3172 3312 -1 297 385 0 22 chr20 11693969 11694104 -60459778 + MIR3 SINE MIR 14 145 -63 * 2084 127 40 0 chr20 11694108 11694408 -60459474 + AluSx SINE Alu 1 312 0 235 235 259 0 chr20 11694707 11694788 -60459094 + MIR3 SINE MIR 82 183 -25 346 277 74 83 chr20 11695384 11695709 -60458173 + MER102b DNA MER1_type 9 330 -11 1290 141 35 22 chr20 11696323 11696550 -60457332 + MER30 DNA MER1_type 1 230 0 305 341 0 12 chr20 11697253 11697338 -60456544 + MIR SINE MIR 8 91 -171 1718 257 94 2 chr20 11697398 11697885 -60455997 + MLT1H LTR MaLR 18 549 0 192 40 0 0 chr20 11698133 11698158 -60455724 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2181 119 0 7 chr20 11698165 11698460 -60455422 - AluSq SINE Alu -20 293 1 492 328 88 17 chr20 11698768 11699006 -60454876 + MIR SINE MIR 8 262 0 22 0 0 0 chr20 11699743 11699765 -60454117 + AT_rich Low_complexity Low_complexity 1 22 0 2179 126 3 0 chr20 11700280 11700574 -60453308 - AluSg SINE Alu -15 295 1 1369 232 74 25 chr20 11701264 11701695 -60452187 - LTR16A1 LTR ERVL -3 454 3 248 271 29 14 chr20 11702391 11702461 -60451421 + MIR3 SINE MIR 111 181 -27 668 195 5 88 chr20 11702731 11702946 -60450936 + MER3 DNA MER1_type 13 209 0 236 196 0 0 chr20 11702905 11702951 -60450931 - MER3 DNA MER1_type -121 88 43 * 980 252 53 13 chr20 11703316 11703634 -60450248 + LTR16C LTR ERVL 161 491 0 186 348 45 34 chr20 11703993 11704171 -60449711 + L2 LINE L2 725 904 -2410 937 208 5 10 chr20 11704303 11704505 -60449377 + MLT1H LTR MaLR 2 202 -347 1416 177 91 84 chr20 11704513 11704919 -60448963 + MER47B DNA MER2_type 10 418 0 556 286 163 14 chr20 11704928 11705211 -60448671 + MLT1H LTR MaLR 225 549 0 440 222 9 13 chr20 11705573 11705686 -60448196 + MLT1H LTR MaLR 15 170 -379 518 224 99 6 chr20 11705815 11705976 -60447906 + MLT1H LTR MaLR 374 549 0 2373 100 0 0 chr20 11706661 11706972 -60446910 - AluY SINE Alu 0 311 1 1710 196 0 19 chr20 11708403 11708715 -60445167 + AluJo SINE Alu 1 306 -6 1545 144 107 3 chr20 11708786 11709112 -60444770 - MER46B DNA MER2_type 0 236 2 383 295 87 15 chr20 11709754 11709948 -60443934 + MIR SINE MIR 17 219 -43 21 0 0 0 chr20 11710073 11710094 -60443788 + AT_rich Low_complexity Low_complexity 1 21 0 2186 129 0 0 chr20 11710381 11710691 -60443191 + AluSx SINE Alu 1 310 -2 639 244 100 25 chr20 11710843 11711203 -60442679 - L1ME4a LINE L1 -282 5839 5511 664 284 75 53 chr20 11711308 11711776 -60442106 - L1MC5 LINE L1 -7 7954 7477 2076 144 13 0 chr20 11713247 11713373 -60440509 + AluSx SINE Alu 1 124 -188 408 20 0 0 chr20 11713373 11713422 -60440460 + (CA)n Simple_repeat Simple_repeat 2 50 0 2076 144 13 0 chr20 11713422 11713594 -60440288 + AluSx SINE Alu 124 303 -9 1371 221 94 21 chr20 11713620 11714046 -60439836 + MLT1C LTR MaLR 6 462 -5 1451 104 8 58 chr20 11714839 11714972 -60438910 - MER30 DNA MER1_type -1 229 112 207 0 0 0 chr20 11714972 11714995 -60438887 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1451 104 8 58 chr20 11714995 11715101 -60438781 - MER30 DNA MER1_type -118 112 2 325 259 153 0 chr20 11716546 11716677 -60437205 - MER103 DNA DNA -9 157 7 2007 144 0 0 chr20 11717809 11718114 -60435768 - AluSx SINE Alu -7 305 1 22 0 0 0 chr20 11718269 11718291 -60435591 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr20 11718350 11718373 -60435509 + AT_rich Low_complexity Low_complexity 1 23 0 2199 129 6 0 chr20 11718380 11718691 -60435191 + AluSq SINE Alu 1 313 0 516 237 37 56 chr20 11720263 11720478 -60433404 - MIR SINE MIR -29 233 23 261 271 35 24 chr20 11720858 11720943 -60432939 - MIR3 SINE MIR -4 204 119 240 293 71 20 chr20 11724045 11724144 -60429738 + MIR3 SINE MIR 104 207 -1 747 253 34 51 chr20 11724372 11724428 -60429454 - L1ME1 LINE L1 -5 6161 6106 2040 125 30 0 chr20 11724428 11724725 -60429157 + AluSx SINE Alu 1 306 -6 747 253 34 51 chr20 11724725 11724964 -60428918 - L1ME1 LINE L1 -60 6106 5871 1014 189 69 36 chr20 11725513 11725873 -60428009 - Charlie4a DNA MER1_type -81 427 56 4055 205 59 10 chr20 11725873 11726681 -60427201 + L1MB7 LINE L1 4130 4897 -1287 186 43 0 0 chr20 11726681 11726704 -60427178 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4055 205 59 10 chr20 11726704 11727736 -60426146 + L1MB7 LINE L1 4897 6065 -119 24 0 0 0 chr20 11727829 11727853 -60426029 + AT_rich Low_complexity Low_complexity 1 24 0 721 226 101 0 chr20 11729200 11729359 -60424523 + MER45A DNA AcHobo 1 175 -3 315 253 0 0 chr20 11729585 11729668 -60424214 - HsTC2 DNA Tc2 -3 1895 1813 375 218 13 0 chr20 11729693 11729771 -60424111 + Tigger7 DNA MER2_type 1 79 -2408 23 78 0 0 chr20 11729779 11729830 -60424052 + AT_rich Low_complexity Low_complexity 1 51 0 1126 133 86 26 chr20 11729915 11730148 -60423734 + Tigger7 DNA MER2_type 2341 2587 0 1596 196 31 0 chr20 11731005 11731291 -60422591 + AluJb SINE Alu 1 295 -17 2458 63 0 10 chr20 11731379 11731682 -60422200 - AluY SINE Alu -11 300 1 258 136 0 0 chr20 11731682 11731726 -60422156 - Alu SINE Alu -258 44 1 1065 248 151 17 chr20 11732115 11732526 -60421356 - MER31B LTR ERV1 0 466 1 239 318 34 59 chr20 11732572 11732737 -60421145 - MIR SINE MIR -56 152 18 1840 119 83 4 chr20 11737411 11737688 -60416194 + AluSg SINE Alu 1 299 -11 186 211 211 0 chr20 11737701 11737758 -60416124 - MIR SINE MIR -80 182 114 765 207 40 29 chr20 11737769 11737943 -60415939 - MER5A DNA MER1_type -1 188 13 2272 76 3 26 chr20 11738263 11738565 -60415317 + AluY SINE Alu 2 296 -15 22 0 0 0 chr20 11739982 11740004 -60413878 + AT_rich Low_complexity Low_complexity 1 22 0 785 187 239 28 chr20 11740081 11740400 -60413482 + MLT1A1 LTR MaLR 1 365 0 1360 111 0 0 chr20 11740431 11740611 -60413271 - AluSg/x SINE Alu -9 303 124 991 280 143 16 chr20 11740719 11741208 -60412674 + L2 LINE L2 1419 1969 -1345 2012 139 47 28 chr20 11741208 11741595 -60412287 + MER57A LTR ERV1 1 394 -9 292 251 235 25 chr20 11741605 11741848 -60412034 + L2 LINE L2 1974 2267 -1047 237 279 0 0 chr20 11741857 11741918 -60411964 + (ATG)n Simple_repeat Simple_repeat 2 62 0 782 238 17 17 chr20 11741946 11742118 -60411764 - MIR SINE MIR -26 236 65 1081 287 111 22 chr20 11742145 11742695 -60411187 + L2 LINE L2 2302 2900 -414 213 310 14 111 chr20 11742814 11743030 -60410852 + L2 LINE L2 3115 3309 -4 355 269 58 6 chr20 11744637 11744793 -60409089 + MER104 DNA Tc2 5 168 -12 180 0 0 0 chr20 11744944 11744964 -60408918 + (CAA)n Simple_repeat Simple_repeat 2 21 0 339 281 26 26 chr20 11745006 11745120 -60408762 - MIR3 SINE MIR -24 184 71 224 71 48 0 chr20 11745224 11745266 -60408616 + (TTTAA)n Simple_repeat Simple_repeat 2 45 0 403 326 23 8 chr20 11746134 11746266 -60407616 + MIR SINE MIR 33 166 -96 633 53 0 0 chr20 11746266 11746367 -60407515 + AluY SINE Alu 209 309 0 883 237 128 60 chr20 11746719 11747267 -60406615 + MLT1G1 LTR MaLR 4 588 -7 5287 138 58 10 chr20 11747521 11748400 -60405482 + Tigger1 DNA MER2_type 1498 2418 0 1827 132 3 43 chr20 11749072 11749375 -60404507 - AluJo SINE Alu -21 291 1 427 350 116 12 chr20 11750115 11750461 -60403421 + L1MC/D LINE L1 5412 5793 -2015 202 260 14 27 chr20 11750616 11750689 -60403193 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 268 286 13 0 chr20 11752098 11752175 -60401707 + (TCCA)n Simple_repeat Simple_repeat 4 81 0 2674 76 3 80 chr20 11752484 11752895 -60400987 + MER51B LTR ERV1 7 375 -2 720 258 77 13 chr20 11753018 11753431 -60400451 - LTR16C LTR ERVL -2 489 4 572 280 42 6 chr20 11753998 11754166 -60399716 + MER5B DNA MER1_type 5 178 0 1955 131 25 0 chr20 11756337 11756619 -60397263 - AluSx SINE Alu -22 290 2 181 344 0 16 chr20 11756620 11756684 -60397198 + MER5B DNA MER1_type 116 178 0 2160 120 3 0 chr20 11756808 11757100 -60396782 - AluSp SINE Alu -20 293 1 1717 105 8 27 chr20 11757906 11758164 -60395718 + AluSq SINE Alu 47 299 -14 1251 47 0 0 chr20 11758224 11758410 -60395472 + L1PA4 LINE L1 5982 6167 0 23 68 0 0 chr20 11758554 11758598 -60395284 + AT_rich Low_complexity Low_complexity 1 44 0 8514 93 15 97 chr20 11758768 11760261 -60393621 + SVA Other Other 17 1386 0 314 100 0 0 chr20 11760288 11760328 -60393554 + tRNA-Ile-ATT tRNA tRNA 1 40 -37 195 279 82 68 chr20 11761114 11761261 -60392621 + MIR3 SINE MIR 25 173 -35 309 272 18 18 chr20 11762001 11762115 -60391767 - L1ME LINE L1 -329 5841 5728 1592 298 147 17 chr20 11762176 11763208 -60390674 - L2 LINE L2 -43 3270 2096 600 291 48 5 chr20 11763211 11763417 -60390465 - L1ME LINE L1 -504 5658 5444 256 300 100 8 chr20 11763553 11763673 -60390209 + L2 LINE L2 3182 3312 -1 218 246 41 0 chr20 11763709 11763785 -60390097 - MIR SINE MIR -57 151 68 180 77 0 0 chr20 11765834 11765860 -60388022 + (TG)n Simple_repeat Simple_repeat 2 27 0 27 29 0 0 chr20 11766773 11766807 -60387075 + AT_rich Low_complexity Low_complexity 1 34 0 771 204 22 50 chr20 11766996 11767177 -60386705 + MER5A DNA MER1_type 13 188 -1 23 0 0 0 chr20 11767960 11767983 -60385899 + AT_rich Low_complexity Low_complexity 1 23 0 705 201 157 0 chr20 11768731 11768890 -60384992 - MER5A DNA MER1_type -2 187 4 343 331 49 20 chr20 11769144 11769389 -60384493 - L1ME LINE L1 -1752 4394 4143 202 244 0 51 chr20 11770579 11770657 -60383225 + A-rich Low_complexity Low_complexity 5 78 0 198 0 0 0 chr20 11772177 11772199 -60381683 + (CAA)n Simple_repeat Simple_repeat 2 23 0 22 35 0 0 chr20 11773259 11773288 -60380594 + AT_rich Low_complexity Low_complexity 1 29 0 292 169 42 0 chr20 11773550 11773621 -60380261 + GA-rich Low_complexity Low_complexity 3 76 0 2363 101 0 3 chr20 11774124 11774431 -60379451 - AluSx SINE Alu -6 306 1 182 314 0 0 chr20 11776125 11776176 -60377706 + L2 LINE L2 3217 3267 -5 2208 90 6 32 chr20 11778638 11778949 -60374933 - AluY SINE Alu -8 303 1 1033 173 5 16 chr20 11779740 11779931 -60373951 + MER53 DNA DNA 1 189 0 710 256 118 44 chr20 11780407 11780728 -60373154 - LTR16A1 LTR ERVL -91 366 22 183 143 95 0 chr20 11781045 11781087 -60372795 - MIR SINE MIR -123 139 94 780 201 168 6 chr20 11783088 11783267 -60370615 - MER3 DNA MER1_type -1 208 1 3027 141 82 68 chr20 11783387 11784083 -60369799 - L1MB3 LINE L1 -3 6180 5475 196 236 181 0 chr20 11784867 11784939 -60368943 - MIR SINE MIR -59 149 65 1963 139 3 16 chr20 11786135 11786444 -60367438 - AluSx SINE Alu -7 305 1 716 240 76 0 chr20 11786790 11786961 -60366921 + MER5A DNA MER1_type 6 189 0 620 217 184 13 chr20 11786977 11787129 -60366753 + MER5A DNA MER1_type 9 186 -3 1874 174 36 9 chr20 11787219 11787552 -60366330 - MLT1A1 LTR MaLR -23 342 1 1782 179 3 6 chr20 11787911 11788223 -60365659 - AluJb SINE Alu -1 311 1 7926 37 5 2 chr20 11788736 11789758 -60364124 + L1PA3 LINE L1 5127 6150 -5 30 0 0 0 chr20 11789764 11789794 -60364088 + AT_rich Low_complexity Low_complexity 1 30 0 443 222 67 89 chr20 11789950 11790130 -60363752 - MER5B DNA MER1_type -2 176 1 410 242 194 8 chr20 11790165 11790289 -60363593 - MER5A DNA MER1_type -2 187 41 763 218 18 6 chr20 11790434 11790599 -60363283 + MER5A DNA MER1_type 1 167 -22 21 36 0 0 chr20 11790697 11790725 -60363157 + AT_rich Low_complexity Low_complexity 1 28 0 763 82 0 0 chr20 11793766 11793864 -60360018 + L1PA4 LINE L1 6051 6148 -7 2067 139 3 3 chr20 11794199 11794509 -60359373 + AluSx SINE Alu 1 310 -2 830 214 83 61 chr20 11794524 11794753 -60359129 + MIR SINE MIR 2 235 -27 816 271 9 19 chr20 11794800 11795014 -60358868 - MER58C DNA MER1_type -1 214 3 1138 168 10 5 chr20 11795731 11795933 -60357949 + L1MB5 LINE L1 5972 6174 0 213 121 0 0 chr20 11795970 11796003 -60357879 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 216 0 0 0 chr20 11796400 11796424 -60357458 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2304 106 7 0 chr20 11797058 11797361 -60356521 - AluSc SINE Alu -4 305 1 226 330 21 32 chr20 11797385 11797479 -60356403 - MIR3 SINE MIR -29 179 87 469 267 107 40 chr20 11797657 11797882 -60356000 + Charlie8 DNA MER1_type 37 276 -2141 570 196 181 0 chr20 11798754 11798892 -60354990 - MER5A DNA MER1_type 0 189 27 186 200 0 60 chr20 11798932 11798982 -60354900 - MER5A DNA MER1_type -121 68 22 1169 142 6 0 chr20 11799853 11800029 -60353853 - AluSq SINE Alu -16 297 121 970 279 124 35 chr20 11800542 11801343 -60352539 - L2 LINE L2 -12 3301 2345 23 0 0 0 chr20 11803069 11803092 -60350790 + AT_rich Low_complexity Low_complexity 1 23 0 362 132 0 0 chr20 11803334 11803387 -60350495 + Tigger2 DNA MER2_type 13 65 -2653 2397 130 55 2 chr20 11803390 11803805 -60350077 + Tigger2 DNA MER2_type 2280 2716 -2 506 231 148 24 chr20 11803959 11804128 -60349754 + MIR3 SINE MIR 4 193 -15 852 241 26 22 chr20 11804143 11804375 -60349507 - MIR SINE MIR -2 260 28 395 234 171 19 chr20 11804600 11804758 -60349124 - MER5A DNA MER1_type 0 189 8 1383 175 64 3 chr20 11805317 11805614 -60348268 + MER33 DNA MER1_type 10 324 0 622 237 160 0 chr20 11805630 11805786 -60348096 + MER5A DNA MER1_type 9 189 0 1545 169 29 4 chr20 11806382 11806654 -60347228 - AluJb SINE Alu -33 279 1 210 118 0 0 chr20 11807244 11807278 -60346604 + (TA)n Simple_repeat Simple_repeat 2 35 0 313 342 140 37 chr20 11807508 11807751 -60346131 + L2 LINE L2 3005 3272 0 186 118 0 0 chr20 11808291 11808325 -60345557 + (T)n Simple_repeat Simple_repeat 1 34 0 843 242 0 0 chr20 11808426 11808604 -60345278 + MER5A DNA MER1_type 12 189 0 277 359 78 30 chr20 11809284 11809451 -60344431 + MIR SINE MIR 45 219 -43 248 257 0 0 chr20 11809524 11809594 -60344288 + MER116 DNA Mariner 9 78 -2 528 329 156 30 chr20 11810101 11810600 -60343282 + L2 LINE L2 721 1282 -2032 1593 297 190 17 chr20 11810610 11811746 -60342136 + L2 LINE L2 1725 3056 -257 284 277 10 50 chr20 11811747 11811848 -60342034 + L2 LINE L2 3167 3263 -50 25 65 0 0 chr20 11811870 11811916 -60341966 + AT_rich Low_complexity Low_complexity 1 46 0 261 329 35 0 chr20 11812046 11812131 -60341751 + MER91A DNA MER1_type 109 196 0 360 305 100 46 chr20 11813896 11814135 -60339747 + MIR SINE MIR 10 261 -1 257 335 92 38 chr20 11814163 11814234 -60339648 - MIR SINE MIR -44 218 152 696 204 105 11 chr20 11814234 11814425 -60339457 + MER3 DNA MER1_type 1 209 0 257 335 92 38 chr20 11814425 11814538 -60339344 - MIR SINE MIR -110 152 24 536 197 14 84 chr20 11815588 11815685 -60338197 - MIR SINE MIR -21 241 156 2140 202 38 64 chr20 11815685 11816313 -60337569 + LTR9 LTR ERV1 1 612 0 536 197 14 84 chr20 11816313 11816357 -60337525 - MIR SINE MIR -106 156 110 2299 101 0 0 chr20 11817255 11817562 -60336320 - AluY SINE Alu -4 307 1 1505 139 15 133 chr20 11817570 11817900 -60335982 - AluJo SINE Alu -11 291 1 216 339 57 16 chr20 11817967 11818091 -60335791 - MIR SINE MIR -75 187 59 32 0 0 0 chr20 11818824 11818856 -60335026 + AT_rich Low_complexity Low_complexity 1 32 0 1553 155 100 35 chr20 11818880 11819221 -60334661 + MLT1A1 LTR MaLR 3 365 0 210 37 0 0 chr20 11820602 11820629 -60333253 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1517 94 0 0 chr20 11820633 11820825 -60333057 - AluSc SINE Alu -31 278 87 1070 122 0 43 chr20 11820849 11821013 -60332869 - FRAM SINE Alu 0 176 20 443 280 70 21 chr20 11821013 11821299 -60332583 - LTR16B LTR ERVL -34 430 131 732 251 215 14 chr20 11821611 11822067 -60331815 - L2 LINE L2 -62 3251 2684 422 294 49 54 chr20 11822061 11822245 -60331637 - MIR SINE MIR -70 192 10 * 2011 140 3 37 chr20 11822798 11823119 -60330763 + AluJo SINE Alu 1 310 -2 2093 118 0 29 chr20 11823123 11823438 -60330444 + AluSc SINE Alu 1 306 -3 215 302 132 44 chr20 11823760 11823942 -60329940 + MIR SINE MIR 52 249 -13 1049 138 39 17 chr20 11824104 11824285 -60329597 - MER5A DNA MER1_type -4 185 1 343 282 25 22 chr20 11824312 11824447 -60329435 + MIR SINE MIR 62 199 -62 3846 129 6 8 chr20 11824452 11825079 -60328803 + MER41B LTR ERV1 3 628 -7 2609 172 54 16 chr20 11825171 11825672 -60328210 + MLT2B1 LTR ERVL 1 520 0 2105 176 143 34 chr20 11826282 11826877 -60327005 + LTR8A LTR ERV1 1 660 -67 1038 162 11 37 chr20 11826877 11827068 -60326814 - AluJb SINE Alu -5 307 122 1286 117 0 0 chr20 11827069 11827240 -60326642 - AluSq SINE Alu -142 171 1 389 153 14 0 chr20 11827240 11827312 -60326570 + LTR8A LTR ERV1 655 727 0 661 221 0 21 chr20 11827932 11828072 -60325810 + MER58B DNA MER1_type 202 338 -3 383 243 139 40 chr20 11828560 11828733 -60325149 + L2 LINE L2 2632 2821 -493 * 818 222 11 22 chr20 11828728 11828913 -60324969 - MER5A DNA MER1_type -6 183 1 752 287 45 80 chr20 11828915 11829097 -60324785 + L2 LINE L2 2804 2991 -322 2132 120 0 32 chr20 11829097 11829406 -60324476 - AluSx SINE Alu -13 299 1 752 287 45 80 chr20 11829406 11829711 -60324171 + L2 LINE L2 2991 3274 -39 1525 104 0 0 chr20 11829991 11830184 -60323698 + AluSp SINE Alu 107 299 -14 836 243 34 80 chr20 11831940 11832418 -60321464 + LTR37B LTR ERV1 11 466 -2 483 48 0 0 chr20 11832641 11832703 -60321179 + (TG)n Simple_repeat Simple_repeat 2 63 0 754 212 63 5 chr20 11833034 11833223 -60320659 - MER3 DNA MER1_type 0 209 10 1941 164 0 6 chr20 11834317 11834628 -60319254 - AluY SINE Alu -2 309 1 461 369 53 36 chr20 11835479 11836012 -60317870 - L2 LINE L2 -43 3229 2688 240 197 33 16 chr20 11836056 11836117 -60317765 + L1ME4a LINE L1 5965 6026 -95 519 240 16 8 chr20 11836861 11836982 -60316900 + MIR SINE MIR 128 249 -13 23 0 0 0 chr20 11837097 11837120 -60316762 + AT_rich Low_complexity Low_complexity 1 23 0 477 0 0 0 chr20 11837509 11837562 -60316320 + (TG)n Simple_repeat Simple_repeat 2 54 0 1642 186 55 6 chr20 11837846 11838173 -60315709 + MER61A LTR ERV1 1 343 0 1887 120 0 39 chr20 11838642 11838925 -60314957 + AluSx SINE Alu 2 273 -39 493 350 67 30 chr20 11838966 11839295 -60314587 + HAL1 LINE L1 1257 1597 -910 21 0 0 0 chr20 11839523 11839544 -60314338 + AT_rich Low_complexity Low_complexity 1 21 0 1218 39 13 0 chr20 11840011 11840166 -60313716 + L1PA4 LINE L1 5997 6153 -2 22 35 0 0 chr20 11840174 11840203 -60313679 + AT_rich Low_complexity Low_complexity 1 29 0 2917 136 3 46 chr20 11841249 11841814 -60312068 + L1MA7 LINE L1 5550 6090 -201 24 32 0 0 chr20 11842171 11842202 -60311680 + AT_rich Low_complexity Low_complexity 1 31 0 1341 219 146 32 chr20 11843762 11844200 -60309682 + MLT1D LTR MaLR 1 488 -17 321 303 145 0 chr20 11845189 11845423 -60308459 + L1ME4a LINE L1 5574 5841 -280 264 212 95 83 chr20 11845489 11845753 -60308129 + L1ME4a LINE L1 5853 6119 -2 21 71 0 0 chr20 11846300 11846342 -60307540 + AT_rich Low_complexity Low_complexity 1 42 0 1363 208 39 12 chr20 11846612 11846949 -60306933 - MER39 LTR ERV1 -5 702 357 469 220 90 14 chr20 11846917 11847081 -60306801 - MER39 LTR ERV1 -359 183 6 * 1696 92 4 8 chr20 11847529 11847769 -60306113 - L1PB1 LINE L1 -1 6150 5912 7592 27 0 0 chr20 11848036 11849176 -60304706 - L1PA4 LINE L1 -1 6154 5015 2283 38 0 0 chr20 11849176 11849466 -60304416 + L1PA4 LINE L1 4694 4983 -1163 757 201 65 0 chr20 11850200 11850369 -60303513 + MER5A DNA MER1_type 4 183 -6 186 360 116 12 chr20 11851311 11851397 -60302485 + L2 LINE L2 3126 3220 -52 279 0 0 0 chr20 11851403 11851434 -60302448 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 318 50 0 0 chr20 11851527 11851567 -60302315 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 314 167 0 0 chr20 11851576 11851630 -60302252 - Alu SINE Alu -9 291 238 411 73 0 0 chr20 11851632 11851687 -60302195 + (TTCCC)n Simple_repeat Simple_repeat 2 56 0 229 139 0 0 chr20 11851723 11851759 -60302123 - Alu SINE Alu -27 274 239 466 161 40 27 chr20 11851762 11851911 -60301971 + CT-rich Low_complexity Low_complexity 4 154 0 213 65 0 0 chr20 11851914 11851945 -60301937 + (TCTCTG)n Simple_repeat Simple_repeat 4 34 0 2011 140 20 0 chr20 11851960 11852260 -60301622 - AluSx SINE Alu -6 306 1 527 244 15 15 chr20 11854001 11854132 -60299750 + MIR3 SINE MIR 12 142 -66 264 331 172 38 chr20 11856565 11856961 -60296921 + L3 LINE CR1 765 1213 -364 216 336 80 7 chr20 11856947 11857084 -60296798 - MIR3 SINE MIR -32 176 30 * 1072 292 91 19 chr20 11860560 11861088 -60292794 + L2 LINE L2 2749 3313 0 284 350 150 31 chr20 11861282 11861508 -60292374 - L2 LINE L2 -20 3252 3000 468 266 127 76 chr20 11861967 11862242 -60291640 + MLT1H LTR MaLR 39 327 -222 238 204 0 0 chr20 11862366 11862410 -60291472 + MLT1H LTR MaLR 506 549 0 21 0 0 0 chr20 11863593 11863614 -60290268 + AT_rich Low_complexity Low_complexity 1 21 0 528 358 17 0 chr20 11863768 11863944 -60289938 - MIR SINE MIR -72 190 12 330 317 17 17 chr20 11865045 11865225 -60288657 + L1ME4a LINE L1 5719 5898 -223 233 264 253 22 chr20 11866099 11866190 -60287692 + L2 LINE L2 3201 3312 -1 257 242 253 0 chr20 11867992 11868091 -60285791 - MER5A DNA MER1_type 0 189 66 813 182 34 0 chr20 11868093 11868241 -60285641 - FRAM SINE Alu -3 173 21 256 207 0 0 chr20 11868241 11868304 -60285578 - MER5A DNA MER1_type -124 65 3 753 233 93 48 chr20 11868668 11868981 -60284901 + MLT1J1 LTR MaLR 109 435 -11 373 348 76 31 chr20 11869082 11869306 -60284576 + MIR SINE MIR 15 248 -14 222 218 0 0 chr20 11869321 11869375 -60284507 - MER5A DNA MER1_type -133 56 3 220 305 24 37 chr20 11869481 11869563 -60284319 + MIR SINE MIR 19 99 -109 2609 88 11 0 chr20 11869628 11869979 -60283903 + THE1A LTR MaLR 1 355 0 492 309 71 54 chr20 11870959 11871309 -60282573 + L2 LINE L2 2465 2820 -494 399 21 0 0 chr20 11871333 11871381 -60282501 + (CA)n Simple_repeat Simple_repeat 2 49 0 316 280 45 8 chr20 11871439 11871571 -60282311 + L2 LINE L2 2966 3102 -170 891 253 30 17 chr20 11871585 11871818 -60282064 + MIR SINE MIR 19 254 -8 1663 169 6 47 chr20 11872843 11873162 -60280720 - AluJo SINE Alu -6 306 1 450 304 135 14 chr20 11873553 11873760 -60280122 + MIR SINE MIR 9 240 -22 1051 261 72 14 chr20 11874507 11874856 -60279026 + L1ME1 LINE L1 5776 6144 -22 317 202 24 24 chr20 11875314 11875398 -60278484 + LTR33A LTR ERVL 440 523 0 278 269 35 78 chr20 11875604 11875745 -60278137 - MLT1K LTR MaLR -250 338 204 243 355 153 49 chr20 11876404 11876795 -60277087 + MLT1K LTR MaLR 38 469 -119 1692 144 70 104 chr20 11876913 11877356 -60276526 - MSTC LTR MaLR 0 428 1 28 29 0 0 chr20 11877541 11877576 -60276306 + AT_rich Low_complexity Low_complexity 1 35 0 384 260 169 7 chr20 11878702 11878751 -60275131 - MER5A DNA MER1_type 0 189 149 266 68 45 0 chr20 11878751 11878795 -60275087 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 384 260 169 7 chr20 11878795 11878899 -60274983 - MER5A DNA MER1_type -40 149 11 717 220 81 0 chr20 11879080 11879253 -60274629 - MER5A DNA MER1_type -2 187 1 297 301 39 39 chr20 11879323 11879479 -60274403 - MIR3 SINE MIR -2 206 51 2124 140 0 0 chr20 11879546 11879854 -60274028 - AluSx SINE Alu -2 310 3 246 331 14 47 chr20 11879973 11880121 -60273761 + MER5A DNA MER1_type 5 147 -42 754 205 12 29 chr20 11880171 11880342 -60273540 + MER5B DNA MER1_type 8 175 -3 548 179 0 0 chr20 11881540 11881642 -60272240 - MER5A DNA MER1_type -84 105 4 279 122 0 0 chr20 11882709 11882758 -60271124 + (CTCA)n Simple_repeat Simple_repeat 4 52 0 287 307 0 9 chr20 11884396 11884510 -60269372 + (TA)n Simple_repeat Simple_repeat 2 114 0 1237 197 42 16 chr20 11885062 11885372 -60268510 - MER33 DNA MER1_type -5 319 2 320 319 42 42 chr20 11885554 11885698 -60268184 - HAL1b LINE L1 -449 899 756 370 296 22 7 chr20 11886177 11886312 -60267570 - HAL1 LINE L1 -851 1656 1520 2359 96 0 0 chr20 11886320 11886622 -60267260 - AluSg SINE Alu -8 302 1 333 324 41 12 chr20 11886938 11887182 -60266700 - HAL1 LINE L1 -1239 1268 1018 23 0 0 0 chr20 11887193 11887216 -60266666 + AT_rich Low_complexity Low_complexity 1 23 0 420 281 78 97 chr20 11888534 11888865 -60265017 + MLT1L LTR MaLR 111 542 -73 1198 208 9 0 chr20 11889174 11889390 -60264492 + MER58A DNA MER1_type 6 223 -1 497 261 30 0 chr20 11889390 11889524 -60264358 - MER46C DNA MER2_type -142 196 59 2059 141 0 10 chr20 11890338 11890644 -60263238 - AluSx SINE Alu -9 303 1 550 272 6 50 chr20 11891952 11891974 -60261908 - MER5B DNA MER1_type -1 177 156 2364 194 60 22 chr20 11891974 11892475 -60261407 - MLT2B1 LTR ERVL 0 520 1 550 272 6 50 chr20 11892475 11892632 -60261250 - MER5B DNA MER1_type -22 156 6 519 224 0 0 chr20 11892684 11892782 -60261100 - MER5A DNA MER1_type -83 106 9 434 226 113 0 chr20 11892792 11892907 -60260975 + MER3 DNA MER1_type 42 122 -87 1406 191 61 21 chr20 11892913 11893291 -60260591 + MER3 DNA MER1_type 2232 2624 0 283 286 64 22 chr20 11893453 11893652 -60260230 + MLT1L LTR MaLR 309 568 -47 440 286 173 0 chr20 11893664 11893797 -60260085 - MER5A DNA MER1_type -22 167 12 248 247 43 32 chr20 11894017 11894110 -60259772 + MER103 DNA DNA 2 95 -71 314 346 55 45 chr20 11894300 11894502 -60259380 + MIR SINE MIR 23 226 -36 191 350 140 13 chr20 11895132 11895289 -60258593 - L2 LINE L2 0 3313 3137 1544 207 59 77 chr20 11895339 11895452 -60258430 + MLT1D LTR MaLR 1 114 -391 1713 148 39 28 chr20 11895452 11895736 -60258146 + AluJo SINE Alu 1 287 -25 791 41 0 0 chr20 11895736 11895833 -60258049 + L1PA4 LINE L1 6056 6152 -3 1544 207 59 77 chr20 11895833 11896270 -60257612 + MLT1D LTR MaLR 112 505 0 198 191 0 0 chr20 11896853 11896895 -60256987 + (TA)n Simple_repeat Simple_repeat 1 42 0 23 86 0 0 chr20 11897112 11897170 -60256712 + AT_rich Low_complexity Low_complexity 1 58 0 1439 248 70 4 chr20 11897770 11898241 -60255641 + Charlie4a DNA MER1_type 5 506 -2 328 45 0 0 chr20 11898706 11898750 -60255132 - MADE1 DNA Mariner 0 80 37 299 170 19 0 chr20 11899004 11899057 -60254825 + MLT1H LTR MaLR 5 58 -491 329 191 0 29 chr20 11899057 11899125 -60254757 - MLT1D LTR MaLR 0 467 402 1332 116 6 0 chr20 11899125 11899306 -60254576 + AluSg SINE Alu 1 182 -128 967 222 130 57 chr20 11899321 11899720 -60254162 - MLT1D LTR MaLR -55 412 4 1081 217 60 111 chr20 11899728 11900198 -60253684 + MLT1H LTR MaLR 58 503 -46 662 236 62 50 chr20 11901098 11901356 -60252526 - MIR SINE MIR 0 262 2 249 328 153 11 chr20 11901721 11901898 -60251984 - L3b LINE CR1 -280 1303 1102 790 158 16 43 chr20 11901902 11902086 -60251796 - MER53 DNA DNA -1 188 10 941 194 11 11 chr20 11902156 11902336 -60251546 - MER5A DNA MER1_type -8 181 2 1149 241 157 25 chr20 11902859 11903291 -60250591 + MLT1H LTR MaLR 41 529 -20 282 73 0 0 chr20 11903629 11903670 -60250212 + (TG)n Simple_repeat Simple_repeat 1 41 0 635 204 159 11 chr20 11904727 11904902 -60248980 + MER39 LTR ERV1 260 460 -247 2000 155 43 33 chr20 11904902 11905448 -60248434 + MLT2A2 LTR ERVL 1 554 0 754 198 24 61 chr20 11905467 11905679 -60248203 + MER39 LTR ERV1 504 707 0 366 221 29 10 chr20 11907219 11907323 -60246559 - MER103 DNA DNA -36 130 25 693 191 69 12 chr20 11907429 11907602 -60246280 - MER5A DNA MER1_type -3 186 4 308 216 108 10 chr20 11907819 11907921 -60245961 + L1ME3 LINE L1 6051 6162 0 484 292 49 5 chr20 11908898 11909083 -60244799 + L1ME3A LINE L1 5937 6129 -41 1045 335 97 10 chr20 11909699 11910310 -60243572 + L2 LINE L2 734 1397 -1917 1399 306 120 36 chr20 11910397 11911174 -60242708 + L2 LINE L2 1882 2723 -591 884 297 82 45 chr20 11911270 11911758 -60242124 + L2 LINE L2 2807 3312 -1 1934 205 21 34 chr20 11912798 11913329 -60240553 - L1ME1 LINE L1 -74 6092 5569 21 0 0 0 chr20 11914068 11914089 -60239793 + AT_rich Low_complexity Low_complexity 1 21 0 1398 218 155 15 chr20 11914147 11914541 -60239341 + MLT1H LTR MaLR 101 549 0 1642 164 49 80 chr20 11914693 11915083 -60238799 + MLT1B LTR MaLR 1 378 -12 1271 111 28 0 chr20 11915182 11915363 -60238519 + L1PA11 LINE L1 5987 6172 -2 231 236 18 0 chr20 11915944 11915999 -60237883 - MIR SINE MIR 0 262 207 204 182 0 0 chr20 11916357 11916401 -60237481 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 24 53 0 0 chr20 11917194 11917232 -60236650 + AT_rich Low_complexity Low_complexity 1 38 0 2061 195 60 71 chr20 11917253 11918159 -60235723 + L1M3 LINE L1 4670 5558 -622 21 36 0 0 chr20 11919817 11919845 -60234037 + AT_rich Low_complexity Low_complexity 1 28 0 862 221 119 18 chr20 11920982 11921208 -60232674 + Tigger7 DNA MER2_type 19 267 -2220 488 242 0 0 chr20 11921206 11921305 -60232577 + Tigger7 DNA MER2_type 2489 2587 0 * 306 263 103 32 chr20 11921315 11921471 -60232411 + MLT1F LTR MaLR 126 292 -298 465 265 12 35 chr20 11921537 11921707 -60232175 + MLT1F LTR MaLR 370 535 -7 674 156 119 132 chr20 11922269 11922596 -60231286 + MER33 DNA MER1_type 2 324 0 1611 181 11 18 chr20 11922664 11922946 -60230936 + AluJo SINE Alu 1 280 -32 771 11 0 0 chr20 11922946 11923034 -60230848 + (TAAAA)n Simple_repeat Simple_repeat 2 89 0 774 219 65 77 chr20 11923674 11924042 -60229840 + LTR16A1 LTR ERVL 111 456 -1 1985 104 21 17 chr20 11924415 11924702 -60229180 - AluSx SINE Alu -24 288 1 2329 63 14 0 chr20 11925582 11925869 -60228013 - AluY SINE Alu -20 291 1 2192 111 13 3 chr20 11926652 11926950 -60226932 + AluSg SINE Alu 1 301 -9 1929 142 0 17 chr20 11928252 11928540 -60225342 + AluSx SINE Alu 1 283 -29 2420 58 0 29 chr20 11928540 11928873 -60225009 + AluY SINE Alu 1 311 0 22 0 0 0 chr20 11929402 11929424 -60224458 + AT_rich Low_complexity Low_complexity 1 22 0 307 232 289 37 chr20 11929527 11929717 -60224165 - MIR SINE MIR -13 249 12 455 225 18 36 chr20 11929803 11929914 -60223968 + L2 LINE L2 3164 3272 0 297 0 0 0 chr20 11930463 11930496 -60223386 + (TG)n Simple_repeat Simple_repeat 2 34 0 3503 182 89 45 chr20 11930626 11931612 -60222270 + L1MB7 LINE L1 4858 5904 -280 2215 136 0 16 chr20 11931612 11931928 -60221954 + AluSx SINE Alu 1 311 -1 3503 182 89 45 chr20 11931928 11932222 -60221660 + L1MB7 LINE L1 5904 6184 0 23 0 0 0 chr20 11932310 11932333 -60221549 + AT_rich Low_complexity Low_complexity 1 23 0 232 270 14 0 chr20 11932796 11932870 -60221012 - MLT1H LTR MaLR 0 549 475 383 235 88 7 chr20 11932962 11933098 -60220784 - MLT1H LTR MaLR -395 154 8 450 238 175 28 chr20 11933531 11933674 -60220208 - MER5A DNA MER1_type 0 189 26 314 284 107 45 chr20 11933682 11933880 -60220002 + MIR3 SINE MIR 3 210 -52 482 246 18 9 chr20 11934122 11934232 -60219650 - L2 LINE L2 -5 3308 3198 449 283 104 36 chr20 11934291 11934577 -60219305 + Charlie8 DNA MER1_type 7 302 -2115 1044 169 105 63 chr20 11934941 11935067 -60218815 - MLT1E1 LTR MaLR 0 654 535 1852 58 0 5 chr20 11935067 11935290 -60218592 - AluY SINE Alu -4 307 86 1044 169 105 63 chr20 11935290 11935528 -60218354 - MLT1E1 LTR MaLR -119 535 224 558 161 145 8 chr20 11935577 11935701 -60218181 - MLT1E1 LTR MaLR -507 147 7 1984 177 0 3 chr20 11936216 11936527 -60217355 + AluJo SINE Alu 1 310 -2 646 294 88 13 chr20 11936666 11936894 -60216988 - MIR SINE MIR 0 262 18 220 349 119 0 chr20 11937005 11937114 -60216768 + MER91 DNA MER1_type 75 190 0 1945 108 4 0 chr20 11937924 11938184 -60215698 - AluSg SINE Alu -13 297 37 309 51 0 0 chr20 11938734 11938773 -60215109 + (A)n Simple_repeat Simple_repeat 1 39 0 1011 161 27 103 chr20 11938983 11939080 -60214802 - MER33 DNA MER1_type -2261 324 221 2595 165 67 2 chr20 11939080 11939600 -60214282 + L1MD2 LINE L1 5793 6346 -13 1011 161 27 103 chr20 11939600 11939629 -60214253 - MER33 DNA MER1_type -2364 221 191 1834 199 28 40 chr20 11939629 11940052 -60213830 - MER47B DNA MER2_type 0 418 1 1011 161 27 103 chr20 11940052 11940254 -60213628 - MER33 DNA MER1_type -2394 191 20 2100 100 0 14 chr20 11940394 11940674 -60213208 + AluSx SINE Alu 1 276 -36 234 0 0 0 chr20 11941253 11941279 -60212603 + (A)n Simple_repeat Simple_repeat 1 26 0 430 225 70 21 chr20 11941351 11941493 -60212389 + MIR SINE MIR 97 245 -17 216 0 0 0 chr20 11941976 11942000 -60211882 + (TA)n Simple_repeat Simple_repeat 2 25 0 2560 223 54 25 chr20 11942671 11943389 -60210493 - L1ME1 LINE L1 -3 6163 5425 208 244 189 0 chr20 11943467 11943557 -60210325 - MIR SINE MIR -108 154 48 1241 292 60 24 chr20 11944180 11944792 -60209090 - L2 LINE L2 -209 3104 2469 2460 93 3 0 chr20 11947051 11947363 -60206519 - AluSq SINE Alu 0 313 1 1096 185 70 38 chr20 11947451 11947765 -60206117 - MER33 DNA MER1_type 0 324 1 194 299 146 6 chr20 11948230 11948394 -60205488 - MIR SINE MIR 0 262 76 2593 169 39 31 chr20 11949204 11949720 -60204162 - MLT2B1 LTR ERVL 0 520 1 313 200 29 0 chr20 11949727 11949797 -60204085 + MER5A DNA MER1_type 4 75 -114 2464 60 0 22 chr20 11950338 11950652 -60203230 - AluY SINE Alu -4 307 1 242 281 11 45 chr20 11951400 11951489 -60202393 + L2 LINE L2 3011 3096 -217 1031 262 108 22 chr20 11951543 11951905 -60201977 + LTR16C LTR ERVL 90 482 -9 449 108 15 0 chr20 11951917 11951982 -60201900 + L2 LINE L2 3248 3313 0 182 326 130 11 chr20 11952035 11952127 -60201755 - MER5A DNA MER1_type -22 167 65 1051 170 72 16 chr20 11952236 11952430 -60201452 - AluJb SINE Alu -10 302 98 664 132 0 0 chr20 11952432 11952538 -60201344 + AluJb SINE Alu 202 307 -5 359 225 9 99 chr20 11952538 11952649 -60201233 - MER45 DNA AcHobo -939 101 1 22 0 0 0 chr20 11953154 11953176 -60200706 + AT_rich Low_complexity Low_complexity 1 22 0 1186 206 70 96 chr20 11953487 11953861 -60200021 - MLT1A1 LTR MaLR 0 365 2 457 289 58 13 chr20 11954108 11954264 -60199618 + MIR SINE MIR 20 182 -80 459 259 175 34 chr20 11954288 11954489 -60199393 + L2 LINE L2 2330 2588 -726 1736 135 104 32 chr20 11954489 11954836 -60199046 - THE1C LTR MaLR -2 373 2 459 259 175 34 chr20 11954836 11954931 -60198951 + L2 LINE L2 2588 2668 -646 947 164 0 75 chr20 11954998 11955102 -60198780 + MER20 DNA MER1_type 1 82 -137 1539 185 41 41 chr20 11955102 11955465 -60198417 + MLT1A1 LTR MaLR 3 365 0 947 164 0 75 chr20 11955465 11955573 -60198309 + MER20 DNA MER1_type 82 197 -22 308 204 0 45 chr20 11956509 11956597 -60197285 + MER20 DNA MER1_type 130 213 -6 739 263 224 21 chr20 11956607 11957026 -60196856 + L2 LINE L2 2809 3312 -1 1936 125 26 22 chr20 11957783 11958094 -60195788 + AluSx SINE Alu 1 312 0 1131 260 162 15 chr20 11958930 11959693 -60194189 - L2 LINE L2 -1 3312 2451 1445 176 72 14 chr20 11959854 11960133 -60193749 + AluJo SINE Alu 1 295 -17 198 0 0 0 chr20 11960435 11960457 -60193425 + (T)n Simple_repeat Simple_repeat 1 22 0 359 192 14 0 chr20 11961186 11961259 -60192623 + MER116 DNA Mariner 7 80 0 21 0 0 0 chr20 11961287 11961308 -60192574 + AT_rich Low_complexity Low_complexity 1 21 0 255 309 82 0 chr20 11962931 11963028 -60190854 - L2 LINE L2 0 3313 3209 1425 187 29 64 chr20 11963243 11963618 -60190264 + MLT1A2 LTR MaLR 1 362 -12 299 294 33 0 chr20 11965183 11965275 -60188607 - MIR3 SINE MIR -9 199 105 953 190 23 9 chr20 11965451 11965667 -60188215 - MLT1D LTR MaLR 0 505 287 1227 221 151 34 chr20 11965936 11966709 -60187173 - Charlie2 DNA MER1_type -2 2860 1987 2106 118 0 7 chr20 11966709 11967020 -60186862 - AluSq SINE Alu 0 309 1 1227 221 151 34 chr20 11967020 11967049 -60186833 - Charlie2 DNA MER1_type -875 1987 1963 456 283 172 20 chr20 11967092 11967336 -60186546 - Charlie2 DNA MER1_type -2557 305 25 204 270 14 27 chr20 11968440 11968514 -60185368 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 1752 236 77 33 chr20 11968588 11969199 -60184683 + L1ME1 LINE L1 5524 6161 -5 947 165 6 0 chr20 11969805 11969963 -60183919 - MER5A DNA MER1_type -3 186 28 1534 164 18 31 chr20 11970612 11970898 -60182984 + AluJb SINE Alu 1 282 -30 198 0 0 0 chr20 11970907 11970929 -60182953 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1403 196 160 20 chr20 11971224 11971623 -60182259 + MLT1D LTR MaLR 51 505 0 354 246 43 22 chr20 11974923 11975061 -60178821 + L1ME2 LINE L1 6005 6145 -19 306 279 43 43 chr20 11975157 11975297 -60178585 + L1MC5 LINE L1 7772 7911 -50 360 0 0 0 chr20 11975431 11975471 -60178411 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 1743 125 4 8 chr20 11975475 11975731 -60178151 - AluSx SINE Alu -37 275 21 486 253 158 19 chr20 11976427 11976585 -60177297 + MER5A DNA MER1_type 10 189 0 668 113 0 0 chr20 11977783 11977880 -60176002 - L1MC1 LINE L1 0 6333 6237 372 22 0 0 chr20 11979222 11979267 -60174615 + (CA)n Simple_repeat Simple_repeat 2 46 0 333 278 35 0 chr20 11979401 11979516 -60174366 + MER103 DNA DNA 47 165 -1 25 0 0 0 chr20 11980479 11980504 -60173378 + AT_rich Low_complexity Low_complexity 1 25 0 414 225 34 0 chr20 11980626 11980715 -60173167 + MIR SINE MIR 83 174 -88 193 200 0 0 chr20 11980800 11980840 -60173042 - L2 LINE L2 -5 3267 3228 257 279 65 19 chr20 11981253 11981407 -60172475 + HAL1b LINE L1 746 906 -442 567 232 130 16 chr20 11981968 11982153 -60171729 - MER63A DNA MER1_type 0 210 5 22 35 0 0 chr20 11983150 11983179 -60170703 + AT_rich Low_complexity Low_complexity 1 29 0 281 224 0 13 chr20 11983182 11983258 -60170624 + ALR/Alpha Satellite centromeric 32 106 -66 207 239 221 26 chr20 11983552 11983665 -60170217 + MIR SINE MIR 1 135 -127 362 320 59 26 chr20 11983792 11983945 -60169937 + MIR SINE MIR 7 164 -98 443 311 8 0 chr20 11984612 11984731 -60169151 - L2 LINE L2 -1 3271 3152 28 48 0 0 chr20 11985217 11985259 -60168623 + AT_rich Low_complexity Low_complexity 1 42 0 725 266 118 43 chr20 11986096 11986488 -60167394 - MER113 DNA MER1_type? -1 520 84 1825 172 0 10 chr20 11986488 11986784 -60167098 + AluSx SINE Alu 1 293 -19 725 266 118 43 chr20 11986784 11986875 -60167007 - MER113 DNA MER1_type? -437 84 1 900 213 25 15 chr20 11986908 11987110 -60166772 + MIR SINE MIR 46 249 -13 817 178 53 13 chr20 11987113 11987265 -60166617 - FRAM SINE Alu -18 158 1 417 153 0 0 chr20 11988165 11988237 -60165645 + GA-rich Low_complexity Low_complexity 3 74 0 479 238 135 0 chr20 11988579 11988705 -60165177 + MIR SINE MIR 38 180 -82 316 317 0 0 chr20 11989554 11989658 -60164224 + MLT1H LTR MaLR 1 104 -445 2943 110 5 0 chr20 11989659 11990088 -60163794 + L1PB3 LINE L1 5708 6138 -16 975 99 0 0 chr20 11990089 11990230 -60163652 + (GGAA)n Simple_repeat Simple_repeat 2 142 0 483 70 70 0 chr20 11990230 11990316 -60163566 + GA-rich Low_complexity Low_complexity 2 93 0 215 204 74 19 chr20 11990394 11990448 -60163434 + L2 LINE L2 3256 3312 -1 554 264 45 0 chr20 11990648 11990803 -60163079 + MLT1J LTR MaLR 1 162 -349 2522 96 8 3 chr20 11991420 11991773 -60162109 - THE1A LTR MaLR 0 355 1 11482 103 6 3 chr20 11991773 11993349 -60160533 - THE1A-int LTR MaLR 0 1580 1 2713 79 6 3 chr20 11993349 11993703 -60160179 - THE1A LTR MaLR 0 355 1 1464 176 106 3 chr20 11993703 11994013 -60159869 + MER2 DNA MER2_type 1 344 0 439 251 169 5 chr20 11994306 11994501 -60159381 + MIR SINE MIR 24 250 -12 376 311 12 25 chr20 11994916 11995077 -60158805 + LTR16A LTR ERVL 2 160 -290 694 268 0 18 chr20 11995118 11995286 -60158596 + LTR16A LTR ERVL 276 440 -10 508 295 32 6 chr20 11995299 11995455 -60158427 - MIR SINE MIR -101 161 2 859 231 101 75 chr20 11995587 11996025 -60157857 - LTR33A LTR ERVL -2 521 73 333 303 25 37 chr20 11996811 11996973 -60156909 + MIR3 SINE MIR 44 203 -5 559 255 135 85 chr20 11997165 11997670 -60156212 + MLT1H LTR MaLR 4 533 -16 390 196 21 10 chr20 11997801 11997898 -60155984 - MER103 DNA DNA -68 98 1 1387 178 159 0 chr20 11998273 11998593 -60155289 + MER93b LTR ERV1 3 373 0 214 254 16 16 chr20 11999354 11999417 -60154465 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 659 195 0 7 chr20 12000249 12000398 -60153484 + CT-rich Low_complexity Low_complexity 3 150 0 549 200 0 0 chr20 12000404 12000509 -60153373 - FLAM_A SINE Alu -1 141 37 1468 288 76 10 chr20 12001708 12002472 -60151410 - L2 LINE L2 -1 3312 2491 214 320 68 59 chr20 12003054 12003276 -60150606 + L2 LINE L2 2836 3059 -213 2367 153 65 0 chr20 12004179 12004579 -60149303 - MSTB LTR MaLR 0 426 1 234 289 167 42 chr20 12004595 12004931 -60148951 - L2 LINE L2 -2 3311 2934 1279 266 85 28 chr20 12005360 12005853 -60148029 + MLT1G1 LTR MaLR 75 595 0 240 357 18 120 chr20 12006896 12007238 -60146644 + L2 LINE L2 2963 3269 -3 1030 231 159 22 chr20 12007787 12008241 -60145641 - LTR33 LTR ERVL -4 517 2 1216 236 31 12 chr20 12008525 12008851 -60145031 + LTR16C LTR ERVL 160 491 0 467 298 19 25 chr20 12008991 12009149 -60144733 + MIR3 SINE MIR 26 182 -26 213 232 145 0 chr20 12009554 12009623 -60144259 + MIR SINE MIR 54 132 -76 231 152 0 0 chr20 12009772 12009818 -60144064 - L1MA9 LINE L1 0 6312 6267 21 0 0 0 chr20 12010705 12010726 -60143156 + AT_rich Low_complexity Low_complexity 1 21 0 486 275 66 0 chr20 12010807 12010974 -60142908 + MER5B DNA MER1_type 1 178 0 1962 152 3 0 chr20 12011492 12011788 -60142094 + AluSx SINE Alu 3 299 -13 878 172 25 105 chr20 12012017 12012255 -60141627 - MER20 DNA MER1_type 0 219 1 219 36 0 0 chr20 12012748 12012776 -60141106 + (CA)n Simple_repeat Simple_repeat 1 28 0 627 265 70 25 chr20 12012899 12013099 -60140783 - MLT1H1 LTR MaLR -1 554 346 450 167 0 0 chr20 12013729 12013813 -60140069 + GA-rich Low_complexity Low_complexity 2 85 0 1031 241 43 18 chr20 12015498 12015780 -60138102 - LTR16C LTR ERVL -10 481 193 266 330 91 0 chr20 12015815 12015903 -60137979 - LTR16C LTR ERVL -367 124 29 2982 122 9 2 chr20 12015904 12016365 -60137517 + L1MB3 LINE L1 5675 6138 -45 1612 136 124 12 chr20 12016369 12016627 -60137255 + AluSx SINE Alu 1 287 -25 2398 136 67 12 chr20 12016653 12017057 -60136825 - MSTB LTR MaLR 0 426 1 2116 103 0 7 chr20 12017070 12017351 -60136531 + AluSx SINE Alu 1 279 -33 531 45 0 0 chr20 12017352 12017418 -60136464 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 22 70 0 0 chr20 12017650 12017693 -60136189 + AT_rich Low_complexity Low_complexity 1 43 0 367 280 193 13 chr20 12017747 12017897 -60135985 + MER5A DNA MER1_type 13 189 0 387 273 103 44 chr20 12018681 12019000 -60134882 + L1ME4a LINE L1 5582 5919 -202 231 114 0 0 chr20 12019017 12019052 -60134830 + (CA)n Simple_repeat Simple_repeat 2 36 0 393 330 89 6 chr20 12019062 12019241 -60134641 + L2 LINE L2 3103 3296 -17 281 248 60 40 chr20 12019271 12019420 -60134462 + L1ME4a LINE L1 5941 6092 -29 22 0 0 0 chr20 12019853 12019875 -60134007 + AT_rich Low_complexity Low_complexity 1 22 0 1390 191 53 18 chr20 12020548 12020831 -60133051 - AluJo SINE Alu -17 295 3 1440 211 42 15 chr20 12020876 12021208 -60132674 + MER58B DNA MER1_type 1 341 0 180 111 0 0 chr20 12021329 12021356 -60132526 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr20 12021613 12021636 -60132246 + AT_rich Low_complexity Low_complexity 1 23 0 422 245 179 33 chr20 12022563 12022898 -60130984 + L1ME4a LINE L1 5733 6116 -5 558 118 0 12 chr20 12024629 12024714 -60129168 + AluS SINE Alu 1 84 -228 192 152 0 0 chr20 12026317 12026350 -60127532 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1013 176 70 12 chr20 12026392 12026649 -60127233 + MER33 DNA MER1_type 1 262 -62 305 65 0 0 chr20 12026742 12026788 -60127094 - L1PA4 LINE L1 0 6155 6110 1459 12 0 0 chr20 12026788 12026956 -60126926 + L1PA2 LINE L1 5958 6125 -30 854 314 64 31 chr20 12027007 12027615 -60126267 - L2 LINE L2 -74 3239 2601 519 310 62 18 chr20 12027633 12027907 -60125975 + L1ME4a LINE L1 5505 5790 -331 674 276 63 37 chr20 12027937 12028400 -60125482 + L1M4 LINE L1 4211 4685 -1461 229 275 29 0 chr20 12028655 12028724 -60125158 + (TA)n Simple_repeat Simple_repeat 1 71 0 234 91 0 0 chr20 12028889 12028922 -60124960 + (CA)n Simple_repeat Simple_repeat 1 33 0 22 35 0 0 chr20 12029199 12029228 -60124654 + AT_rich Low_complexity Low_complexity 1 29 0 2050 20 20 0 chr20 12029379 12029623 -60124259 + L1PA4 LINE L1 5906 6154 -1 25 0 0 0 chr20 12029671 12029696 -60124186 + AT_rich Low_complexity Low_complexity 1 25 0 2247 108 0 0 chr20 12030838 12031125 -60122757 - AluSx SINE Alu -25 287 1 2237 108 7 0 chr20 12032503 12032800 -60121082 + AluSx SINE Alu 1 299 -13 22 35 0 0 chr20 12033286 12033315 -60120567 + AT_rich Low_complexity Low_complexity 1 29 0 300 224 232 8 chr20 12034112 12034237 -60119645 + L1ME4a LINE L1 5969 6121 0 25 31 0 0 chr20 12034825 12034857 -60119025 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr20 12034994 12035017 -60118865 + AT_rich Low_complexity Low_complexity 1 23 0 285 281 117 23 chr20 12035056 12035184 -60118698 - MIR3 SINE MIR 0 208 69 433 124 11 11 chr20 12036112 12036201 -60117681 + (TC)n Simple_repeat Simple_repeat 1 89 0 2354 273 98 32 chr20 12036559 12037867 -60116015 + L2 LINE L2 1927 3313 0 426 221 16 16 chr20 12037957 12038084 -60115798 + L1MC5 LINE L1 7815 7941 -20 438 281 154 15 chr20 12038084 12038351 -60115531 - L1ME LINE L1 -299 5822 5519 728 238 107 16 chr20 12038351 12038495 -60115387 + MER5C DNA MER1_type 7 137 -187 237 65 0 0 chr20 12038495 12038526 -60115356 + (TG)n Simple_repeat Simple_repeat 2 32 0 728 238 107 16 chr20 12038526 12038625 -60115257 + MER5C DNA MER1_type 137 272 -52 686 315 100 53 chr20 12038662 12038735 -60115147 - L1ME LINE L1 -748 5398 5330 589 76 0 0 chr20 12038735 12038814 -60115068 + MADE1 DNA Mariner 2 80 0 686 315 100 53 chr20 12038814 12039964 -60113918 - L1ME LINE L1 -816 5330 4245 23 0 0 0 chr20 12040062 12040085 -60113797 + AT_rich Low_complexity Low_complexity 1 23 0 1560 248 125 15 chr20 12040606 12041077 -60112805 + MLT1G1 LTR MaLR 73 595 0 1675 214 60 13 chr20 12041407 12041870 -60112012 + Charlie1b DNA MER1_type 38 522 -1 896 47 0 0 chr20 12041924 12042030 -60111852 + AluYa5/8 SINE Alu 191 296 -14 2174 124 0 0 chr20 12042912 12043210 -60110672 + AluSx SINE Alu 1 298 -14 249 315 0 0 chr20 12043468 12043541 -60110341 - MLT1J1 LTR MaLR -10 436 364 557 157 0 0 chr20 12044591 12044674 -60109208 + FRAM SINE Alu 73 155 -21 664 203 84 55 chr20 12045450 12045652 -60108230 + MER3 DNA MER1_type 1 208 -1 267 103 0 0 chr20 12046100 12046139 -60107743 + (TA)n Simple_repeat Simple_repeat 1 39 0 255 284 0 0 chr20 12046288 12046376 -60107506 + L1MC4 LINE L1 6614 6701 -1341 * 262 268 0 0 chr20 12046310 12046392 -60107490 - L1MC4 LINE L1 -1347 6695 6614 204 125 0 0 chr20 12046403 12046435 -60107447 + (TA)n Simple_repeat Simple_repeat 2 33 0 189 0 0 0 chr20 12047803 12047824 -60106058 + (A)n Simple_repeat Simple_repeat 1 21 0 1918 156 7 0 chr20 12047824 12048125 -60105757 + AluSx SINE Alu 1 303 -9 422 214 71 77 chr20 12050367 12050563 -60103319 + L1MC5 LINE L1 7761 7955 -6 373 269 179 53 chr20 12052131 12052488 -60101394 + MLT1J LTR MaLR 110 511 0 286 306 78 32 chr20 12053349 12053568 -60100314 - MIR SINE MIR -30 232 4 231 61 0 0 chr20 12054798 12054831 -60099051 + (CA)n Simple_repeat Simple_repeat 2 34 0 25 75 0 0 chr20 12055784 12055837 -60098045 + AT_rich Low_complexity Low_complexity 1 53 0 27 0 0 0 chr20 12056060 12056087 -60097795 + AT_rich Low_complexity Low_complexity 1 27 0 282 283 0 10 chr20 12056131 12056230 -60097652 + (TA)n Simple_repeat Simple_repeat 2 99 0 249 139 0 0 chr20 12056851 12056894 -60096988 + (GAAAA)n Simple_repeat Simple_repeat 4 46 0 1037 227 44 17 chr20 12057868 12058163 -60095719 + L1M4 LINE L1 2128 2430 -3716 246 309 37 12 chr20 12058194 12058275 -60095607 - MIR SINE MIR -91 117 35 459 237 89 37 chr20 12058442 12058577 -60095305 + MIR SINE MIR 50 191 -71 243 259 138 0 chr20 12058571 12058687 -60095195 - MIR SINE MIR -128 134 3 * 1960 70 0 4 chr20 12059985 12060226 -60093656 - AluY SINE Alu -11 300 61 1177 174 5 28 chr20 12061086 12061298 -60092584 - MLT1B LTR MaLR 0 390 184 294 351 87 16 chr20 12061316 12061501 -60092381 + MIR SINE MIR 27 224 -38 270 56 0 0 chr20 12061660 12061696 -60092186 + (TG)n Simple_repeat Simple_repeat 2 37 0 339 273 25 41 chr20 12063457 12063578 -60090304 - L2 LINE L2 -181 3091 2973 182 369 82 8 chr20 12063745 12063867 -60090015 - L2 LINE L2 -541 2773 2643 232 184 20 20 chr20 12063878 12063927 -60089955 + L2 LINE L2 3173 3221 -92 333 315 100 30 chr20 12064088 12064358 -60089524 - L2 LINE L2 -839 2475 2187 35 0 0 0 chr20 12065006 12065041 -60088841 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr20 12065214 12065235 -60088647 + AT_rich Low_complexity Low_complexity 1 21 0 485 275 55 25 chr20 12065493 12065844 -60088038 + LTR33 LTR ERVL 103 521 0 2005 109 88 0 chr20 12066395 12066680 -60087202 + AluSx SINE Alu 1 310 -2 249 33 0 0 chr20 12066686 12066716 -60087166 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 1891 160 7 3 chr20 12066776 12067082 -60086800 + AluJo SINE Alu 1 307 -5 848 246 105 75 chr20 12067667 12068212 -60085670 + L1ME4a LINE L1 5559 6119 -2 2189 116 0 0 chr20 12068562 12068872 -60085010 - AluSx SINE Alu 0 310 1 541 255 35 78 chr20 12069141 12069372 -60084510 + Charlie8 DNA MER1_type 1 221 -2196 455 371 48 0 chr20 12069825 12070035 -60083847 + MIR SINE MIR 6 225 -37 405 0 0 0 chr20 12070204 12070249 -60083633 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 375 238 89 10 chr20 12070844 12070945 -60082937 - MIR SINE MIR -110 152 44 730 247 36 76 chr20 12071077 12071148 -60082734 - Charlie4a DNA MER1_type -1460 501 429 1561 202 13 19 chr20 12071148 12071455 -60082427 - AluJo SINE Alu -7 305 1 730 247 36 76 chr20 12071455 12071658 -60082224 - Charlie4a DNA MER1_type -1532 429 238 321 289 10 10 chr20 12071628 12071732 -60082150 - Charlie4a DNA MER1_type -404 104 1 * 273 197 0 0 chr20 12075910 12075971 -60077911 + (TG)n Simple_repeat Simple_repeat 1 61 0 338 277 195 61 chr20 12075989 12076466 -60077416 + L1M2 LINE L1 587 1127 -5722 * 389 284 107 81 chr20 12076396 12076843 -60077039 - L1M2 LINE L1 -5716 1133 675 308 289 102 8 chr20 12076844 12076972 -60076910 - MIR SINE MIR -21 241 102 2249 88 0 33 chr20 12077774 12078080 -60075802 + AluSq SINE Alu 1 296 -17 518 155 24 0 chr20 12078161 12078245 -60075637 - MER5A DNA MER1_type -74 115 30 425 291 15 30 chr20 12078298 12078432 -60075450 - MIR3 SINE MIR -62 146 15 648 252 46 0 chr20 12078529 12078680 -60075202 - MLT1H LTR MaLR 0 549 392 384 236 5 5 chr20 12078822 12078919 -60074963 - MLT1H LTR MaLR -274 159 71 1634 142 28 28 chr20 12079220 12079502 -60074380 - AluJo SINE Alu -18 294 13 289 255 103 28 chr20 12079538 12079683 -60074199 - L2 LINE L2 -7 3306 3151 1905 157 3 10 chr20 12079690 12079989 -60073893 + AluSx SINE Alu 1 297 -15 279 0 0 0 chr20 12079989 12080020 -60073862 + (TA)n Simple_repeat Simple_repeat 1 31 0 261 57 0 0 chr20 12080077 12080112 -60073770 + (TC)n Simple_repeat Simple_repeat 2 36 0 787 261 160 14 chr20 12080116 12080588 -60073294 - L2 LINE L2 -157 3156 2614 2830 91 11 11 chr20 12080640 12081004 -60072878 - THE1B LTR MaLR 0 364 1 556 255 25 6 chr20 12082511 12082668 -60071214 - L1ME3 LINE L1 -14 6148 5989 608 228 39 7 chr20 12082685 12082944 -60070938 - L1ME3 LINE L1 -167 6011 5749 2081 104 43 0 chr20 12083004 12083283 -60070599 + AluSx SINE Alu 1 291 -21 622 97 29 0 chr20 12083306 12083409 -60070473 + GA-rich Low_complexity Low_complexity 3 108 0 238 167 0 0 chr20 12083409 12083445 -60070437 + polypurine Low_complexity Low_complexity 5 40 0 21 36 0 0 chr20 12084182 12084210 -60069672 + AT_rich Low_complexity Low_complexity 1 28 0 2081 80 0 4 chr20 12084326 12084590 -60069292 - AluY SINE Alu -18 293 31 1544 135 5 0 chr20 12084847 12085069 -60068813 + AluSx SINE Alu 1 223 -89 519 351 58 0 chr20 12085094 12085265 -60068617 + MER91A DNA MER1_type 1 181 -15 241 297 135 31 chr20 12085476 12085705 -60068177 - MLT1H LTR MaLR -296 253 1 232 309 52 10 chr20 12085726 12085823 -60068059 + L2 LINE L2 3204 3304 -9 22 0 0 0 chr20 12085879 12085901 -60067981 + AT_rich Low_complexity Low_complexity 1 22 0 423 103 0 0 chr20 12085903 12085971 -60067911 - L1MA7 LINE L1 0 6291 6224 1158 116 29 0 chr20 12086327 12086500 -60067382 + L1MA4 LINE L1 6117 6294 -6 1944 120 55 0 chr20 12086508 12086783 -60067099 + AluSq SINE Alu 1 290 -23 292 236 0 0 chr20 12086986 12087058 -60066824 - L1MC/D LINE L1 -1969 5839 5768 589 294 163 19 chr20 12087433 12087997 -60065885 - HAL1b LINE L1 -703 645 1 2074 206 28 32 chr20 12088747 12089243 -60064639 - MLT1D LTR MaLR 0 505 12 1827 128 21 40 chr20 12089563 12089891 -60063991 + MER1B DNA MER1_type 18 339 0 27 0 0 0 chr20 12089961 12089988 -60063894 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr20 12090301 12090331 -60063551 + AT_rich Low_complexity Low_complexity 1 30 0 697 153 8 23 chr20 12090961 12091092 -60062790 - MLT2B2 LTR ERVL -386 129 1 208 280 20 0 chr20 12091092 12091142 -60062740 + MIR SINE MIR 206 256 -6 2574 59 0 0 chr20 12092237 12092542 -60061340 + AluY SINE Alu 1 305 -6 1197 213 12 24 chr20 12092702 12092956 -60060926 - AluJb SINE Alu -61 251 1 198 0 0 0 chr20 12093037 12093059 -60060823 + (A)n Simple_repeat Simple_repeat 1 22 0 242 300 33 11 chr20 12093062 12093152 -60060730 + MLT1J2 LTR MaLR 68 159 -291 245 250 0 0 chr20 12093228 12093280 -60060602 + MLT1J2 LTR MaLR 273 324 -126 1280 237 95 21 chr20 12093579 12093917 -60059965 - MLT1E2 LTR MaLR 0 626 264 5942 129 27 16 chr20 12093922 12094771 -60059111 + Tigger1 DNA MER2_type 1 839 -1579 2071 124 34 0 chr20 12094771 12095062 -60058820 + AluSx SINE Alu 1 301 -11 5942 129 27 16 chr20 12095062 12095085 -60058797 + Tigger1 DNA MER2_type 839 860 -1558 2355 94 0 3 chr20 12095085 12095384 -60058498 + AluY SINE Alu 1 298 -13 5942 129 27 16 chr20 12095384 12096166 -60057716 + Tigger1 DNA MER2_type 860 1958 -460 336 117 0 17 chr20 12096167 12096227 -60057655 - L1PA8 LINE L1 0 6172 6114 492 133 33 67 chr20 12096245 12096264 -60057618 + Tigger1 DNA MER2_type 1157 1175 -1243 2321 101 0 0 chr20 12096264 12096562 -60057320 + AluY SINE Alu 1 298 -13 492 133 33 67 chr20 12096562 12096632 -60057250 + Tigger1 DNA MER2_type 1175 1243 -1175 6049 88 52 6 chr20 12096641 12097491 -60056391 - L1PA10 LINE L1 -26 6142 5254 2293 172 28 16 chr20 12097497 12097933 -60055949 + Tigger1 DNA MER2_type 1947 2387 -31 3187 115 87 18 chr20 12097933 12098428 -60055454 + MER1A DNA MER1_type 1 529 0 231 250 0 0 chr20 12098428 12098467 -60055415 + Tigger1 DNA MER2_type 2380 2418 0 530 174 85 177 chr20 12098470 12098660 -60055222 - MLT1E2 LTR MaLR -370 256 99 2142 116 0 16 chr20 12098660 12098970 -60054912 - AluSx SINE Alu -7 305 1 530 174 85 177 chr20 12098970 12099061 -60054821 - MLT1E2 LTR MaLR -527 99 1 2126 130 0 10 chr20 12099379 12099680 -60054202 - AluSx SINE Alu -14 298 1 549 190 50 0 chr20 12100157 12100257 -60053625 + MER96B DNA MER1_type? 4 108 -309 1557 152 29 63 chr20 12100271 12100587 -60053295 - MER44D DNA MER2_type -34 575 1 2168 110 0 0 chr20 12100653 12100963 -60052919 - AluSx SINE Alu 0 310 1 2830 131 44 11 chr20 12101383 12101745 -60052137 + MER4C LTR ERV1 1 382 -83 186 43 0 0 chr20 12101745 12101768 -60052114 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2830 131 44 11 chr20 12101768 12101855 -60052027 + MER4C LTR ERV1 382 465 0 23 0 0 0 chr20 12101871 12101894 -60051988 + AT_rich Low_complexity Low_complexity 1 23 0 4635 91 0 39 chr20 12101894 12102543 -60051339 - L1PB2 LINE L1 -4 6147 5524 23 54 0 0 chr20 12102949 12102986 -60050896 + AT_rich Low_complexity Low_complexity 1 37 0 280 264 16 50 chr20 12103167 12103288 -60050594 + L1ME LINE L1 5673 5789 -332 339 269 32 0 chr20 12103322 12103416 -60050466 + MIR SINE MIR 46 154 -62 643 250 7 0 chr20 12103511 12103651 -60050231 - MER3 DNA MER1_type -5 204 64 425 281 37 0 chr20 12103707 12103842 -60050040 + MIR SINE MIR 45 184 -78 205 146 42 0 chr20 12105289 12105337 -60048545 + T-rich Low_complexity Low_complexity 5 54 0 294 346 20 50 chr20 12106112 12106314 -60047568 - MLT1I LTR MaLR -123 286 91 401 299 20 7 chr20 12106495 12106642 -60047240 - MIR SINE MIR -14 248 100 2343 95 0 40 chr20 12106852 12107178 -60046704 + AluSp SINE Alu 1 313 0 614 273 40 40 chr20 12107313 12107566 -60046316 - MLT1L LTR MaLR -356 259 7 438 278 108 57 chr20 12107575 12107787 -60046095 - MIR SINE MIR -25 237 15 330 251 37 61 chr20 12107801 12107921 -60045961 + MER104 DNA Tc2 1 117 -1781 2834 169 49 6 chr20 12107921 12108448 -60045434 - MER44D DNA MER2_type 0 605 1 330 251 37 61 chr20 12108448 12108490 -60045392 + MER104 DNA Tc2 117 159 -21 2383 90 7 0 chr20 12108538 12108837 -60045045 + AluSp SINE Alu 1 301 -12 1635 163 71 14 chr20 12109476 12109771 -60044111 - AluJo SINE Alu 0 312 1 1835 149 54 3 chr20 12110052 12110347 -60043535 - AluJb SINE Alu -2 310 1 739 232 42 70 chr20 12110614 12110873 -60043009 - LTR16A1 LTR ERVL -145 312 61 3669 89 42 0 chr20 12111311 12111838 -60042044 + L1PA13 LINE L1 5613 6161 -2 834 216 27 5 chr20 12112031 12112141 -60041741 - MER5A DNA MER1_type 0 189 72 1622 190 36 13 chr20 12112141 12112446 -60041436 - AluSx SINE Alu 0 312 1 834 216 27 5 chr20 12112446 12112520 -60041362 - MER5A DNA MER1_type -117 72 1 460 259 38 23 chr20 12113020 12113151 -60040731 + L2 LINE L2 3180 3312 -1 1190 274 57 9 chr20 12113707 12114127 -60039755 + MLT1J1 LTR MaLR 7 446 0 216 164 27 14 chr20 12114138 12114211 -60039671 + (TA)n Simple_repeat Simple_repeat 1 74 0 224 339 144 6 chr20 12114286 12114460 -60039422 - L2 LINE L2 -567 2747 2550 193 381 0 0 chr20 12114510 12114573 -60039309 + L2 LINE L2 3246 3308 -5 705 260 53 18 chr20 12114788 12115015 -60038867 - MLT1J2 LTR MaLR -177 273 39 27 0 0 0 chr20 12115071 12115098 -60038784 + AT_rich Low_complexity Low_complexity 1 27 0 2204 119 0 0 chr20 12115308 12115603 -60038279 - AluSx SINE Alu -17 295 1 30 59 0 0 chr20 12116027 12116078 -60037804 + AT_rich Low_complexity Low_complexity 1 51 0 738 229 73 41 chr20 12116731 12117045 -60036837 - L1M4 LINE L1 -3201 2945 2622 1066 181 99 81 chr20 12117647 12118160 -60035722 + MER34B LTR ERV1 1 560 -5 541 158 137 36 chr20 12118185 12118324 -60035558 + MSTB1 LTR MaLR 220 372 -60 362 240 31 0 chr20 12118371 12118467 -60035415 - LTR67 LTR ERVL 0 557 459 561 146 0 0 chr20 12118624 12118713 -60035169 - LTR8 LTR ERV1 0 691 603 1605 104 68 12 chr20 12118713 12118962 -60034920 + AluSx SINE Alu 39 301 -11 1808 105 25 7 chr20 12118962 12119239 -60034643 - LTR8 LTR ERV1 -409 282 1 557 273 31 0 chr20 12119607 12119735 -60034147 + MIR3 SINE MIR 36 167 -41 656 232 48 43 chr20 12119745 12119869 -60034013 + MER3 DNA MER1_type 1 128 -81 2231 124 0 0 chr20 12119869 12120175 -60033707 + AluSx SINE Alu 1 306 -6 656 232 48 43 chr20 12120175 12120257 -60033625 + MER3 DNA MER1_type 128 208 -1 205 306 12 71 chr20 12120261 12120346 -60033536 + L2 LINE L2 3192 3271 -42 1530 262 63 75 chr20 12120391 12120822 -60033060 - L2 LINE L2 -32 3281 2846 2095 138 0 0 chr20 12120822 12121112 -60032770 + AluSx SINE Alu 6 295 -17 1530 262 63 75 chr20 12121112 12121266 -60032616 - L2 LINE L2 -467 2846 2692 2101 108 0 32 chr20 12121266 12121299 -60032583 - AluSg SINE Alu -6 304 271 210 37 0 0 chr20 12121299 12121326 -60032556 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2101 108 0 32 chr20 12121326 12121606 -60032276 - AluSg SINE Alu -39 271 1 1530 262 63 75 chr20 12121606 12121617 -60032265 - L2 LINE L2 -621 2692 2682 1536 155 41 28 chr20 12121617 12121908 -60031974 - AluJo SINE Alu -17 295 1 1530 262 63 75 chr20 12121908 12122359 -60031523 - L2 LINE L2 -631 2682 2248 24 0 0 0 chr20 12122607 12122631 -60031251 + AT_rich Low_complexity Low_complexity 1 24 0 1074 264 53 48 chr20 12123490 12123925 -60029957 + LTR16A1 LTR ERVL 12 448 -9 590 228 64 35 chr20 12124369 12124444 -60029438 + MER5A DNA MER1_type 9 80 -109 2142 128 0 3 chr20 12124444 12124740 -60029142 + AluSx SINE Alu 13 307 -5 590 228 64 35 chr20 12124740 12124835 -60029047 + MER5A DNA MER1_type 80 184 -5 822 206 29 12 chr20 12125219 12125389 -60028493 + MER5A DNA MER1_type 6 178 -11 189 0 0 0 chr20 12126937 12126958 -60026924 + (T)n Simple_repeat Simple_repeat 1 21 0 2132 144 0 0 chr20 12127271 12127583 -60026299 + AluSx SINE Alu 1 312 0 34 65 0 0 chr20 12127656 12127718 -60026164 + AT_rich Low_complexity Low_complexity 1 62 0 407 228 359 11 chr20 12128290 12128474 -60025408 + MIR SINE MIR 12 259 -3 28 29 0 0 chr20 12128474 12128509 -60025373 + AT_rich Low_complexity Low_complexity 1 35 0 337 143 32 0 chr20 12128984 12129047 -60024835 - MLT1F1 LTR MaLR -433 134 70 596 57 23 0 chr20 12129582 12129670 -60024212 + L1PB1 LINE L1 6061 6150 -1 301 366 170 0 chr20 12130965 12131189 -60022693 - MIR SINE MIR 0 262 1 273 186 17 17 chr20 12131593 12131652 -60022230 - MLT1H1 LTR MaLR -196 394 336 549 288 187 9 chr20 12131692 12131911 -60021971 - MLT1H1 LTR MaLR -285 270 13 321 130 188 0 chr20 12132217 12132286 -60021596 - L2 LINE L2 -2 3311 3230 238 292 26 26 chr20 12132345 12132458 -60021424 - L2 LINE L2 -89 3224 3112 230 135 39 0 chr20 12132795 12132847 -60021035 + GA-rich Low_complexity Low_complexity 3 56 0 330 320 74 61 chr20 12132857 12133088 -60020794 + L2 LINE L2 3039 3272 0 2087 129 6 24 chr20 12134015 12134356 -60019526 - THE1B LTR MaLR 0 364 30 485 300 41 6 chr20 12134738 12134884 -60018998 + MIR SINE MIR 42 196 -66 1563 128 13 0 chr20 12134884 12135111 -60018771 - MER30 DNA MER1_type 0 230 1 485 300 41 6 chr20 12135111 12135134 -60018748 + MIR SINE MIR 196 217 -45 321 336 82 16 chr20 12135172 12135294 -60018588 - L2 LINE L2 -21 3251 3122 1255 225 107 60 chr20 12135894 12136239 -60017643 + L1MC5 LINE L1 7126 7453 -508 2041 141 23 0 chr20 12136239 12136543 -60017339 + AluSx SINE Alu 1 311 -1 1255 225 107 60 chr20 12136543 12136961 -60016921 + L1MC5 LINE L1 7453 7925 -36 1840 169 0 20 chr20 12137351 12137647 -60016235 - AluJo SINE Alu -22 290 1 269 263 38 53 chr20 12137716 12137779 -60016103 - MER90 LTR ERV1 -103 511 449 1939 167 25 11 chr20 12137779 12138139 -60015743 - MLT1A1 LTR MaLR 0 365 1 269 263 38 53 chr20 12138139 12138208 -60015674 - MER90 LTR ERV1 -165 449 381 246 224 13 26 chr20 12138331 12138407 -60015475 - MER90 LTR ERV1 -452 162 88 2205 107 7 3 chr20 12138687 12138986 -60014896 + AluSx SINE Alu 1 300 -12 351 0 0 0 chr20 12139405 12139444 -60014438 + (T)n Simple_repeat Simple_repeat 1 39 0 795 179 12 13 chr20 12139563 12139797 -60014085 + MLT1A1 LTR MaLR 1 338 -27 213 251 14 7 chr20 12139967 12140089 -60013793 + GA-rich Low_complexity Low_complexity 1 121 -324 2077 132 0 0 chr20 12140089 12140384 -60013498 + AluSx SINE Alu 1 295 -17 213 251 14 7 chr20 12140384 12140409 -60013473 + GA-rich Low_complexity Low_complexity 121 445 0 * 545 0 0 15 chr20 12140407 12140473 -60013409 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 285 331 78 7 chr20 12140477 12140619 -60013263 - MIR SINE MIR 0 262 111 2134 101 45 0 chr20 12141506 12141793 -60012089 + AluSx SINE Alu 1 300 -12 244 369 77 17 chr20 12141793 12141984 -60011898 - MIR3 SINE MIR -58 204 7 785 234 81 90 chr20 12142109 12142443 -60011439 + MLT1H LTR MaLR 219 549 0 708 200 4 130 chr20 12142885 12143155 -60010727 + MER106A DNA MER1_type 1 236 0 4016 147 15 26 chr20 12144387 12145055 -60008827 - MER50 LTR ERV1 -20 714 53 270 0 0 0 chr20 12145055 12145085 -60008797 + (TG)n Simple_repeat Simple_repeat 2 31 0 4016 147 15 26 chr20 12145085 12145138 -60008744 - MER50 LTR ERV1 -681 53 1 1710 158 29 18 chr20 12145808 12146086 -60007796 + AluJo SINE Alu 1 281 -31 2037 102 53 0 chr20 12146086 12146368 -60007514 - AluSx SINE Alu -14 298 1 694 282 116 29 chr20 12147141 12147452 -60006430 - MLT1H LTR MaLR -2 593 311 2796 139 19 0 chr20 12147452 12147876 -60006006 - MSTB1 LTR MaLR 0 432 1 694 282 116 29 chr20 12147876 12148066 -60005816 - MLT1H LTR MaLR -284 311 1 296 287 99 10 chr20 12148069 12148170 -60005712 + MER5B DNA MER1_type 22 131 -47 945 189 29 0 chr20 12148389 12148564 -60005318 - MER5A DNA MER1_type -9 180 1 231 143 48 0 chr20 12149887 12149929 -60003953 - MIR SINE MIR -109 153 110 1097 178 198 31 chr20 12150847 12151105 -60002777 + AluJo SINE Alu 2 302 0 233 158 95 21 chr20 12151635 12151730 -60002152 + (TTTA)n Simple_repeat Simple_repeat 3 104 0 334 275 21 63 chr20 12151750 12151892 -60001990 - L1MEc LINE L1 -3961 2168 2033 3192 177 39 3 chr20 12152243 12153164 -60000718 - L1 LINE L1 -1059 5087 4084 22 35 0 0 chr20 12153264 12153293 -60000589 + AT_rich Low_complexity Low_complexity 1 29 0 383 224 0 0 chr20 12153362 12153447 -60000435 - L1MEc LINE L1 -4722 1588 1504 5400 142 13 11 chr20 12153454 12154378 -59999504 + Tigger1 DNA MER2_type 2 927 -1491 396 189 33 16 chr20 12154379 12154501 -59999381 + CT-rich Low_complexity Low_complexity 2 125 0 1035 177 154 71 chr20 12154501 12154767 -59999115 - AluJo SINE Alu -14 288 1 8399 129 32 18 chr20 12154768 12156199 -59997683 + Tigger1 DNA MER2_type 967 2418 0 355 294 106 6 chr20 12156207 12156387 -59997495 - L1MEc LINE L1 -4826 1484 1287 561 233 104 28 chr20 12156417 12156705 -59997177 - L1MEc LINE L1 -4915 1204 895 252 204 153 0 chr20 12158036 12158134 -59995748 - L1MC4 LINE L1 0 8042 7930 573 170 75 201 chr20 12158218 12158482 -59995400 - L1MC4 LINE L1 -130 7912 7721 2174 143 0 0 chr20 12158482 12158776 -59995106 + AluSx SINE Alu 2 295 -17 573 170 75 201 chr20 12158776 12158940 -59994942 - L1MC4 LINE L1 -321 7721 7538 1299 165 182 0 chr20 12158998 12159289 -59994593 - MER2 DNA MER2_type 0 344 1 216 182 0 0 chr20 12159390 12159434 -59994448 + (TA)n Simple_repeat Simple_repeat 2 45 0 2477 64 0 0 chr20 12159599 12159897 -59993985 + AluY SINE Alu 1 298 -13 558 258 59 48 chr20 12162039 12162225 -59991657 + MER58A DNA MER1_type 1 188 -36 634 134 34 8 chr20 12162250 12162369 -59991513 - L1MB1 LINE L1 0 6168 6047 1557 133 11 35 chr20 12162373 12162659 -59991223 - L1MB1 LINE L1 -12 6156 5878 187 200 44 0 chr20 12162749 12162794 -59991088 - L2 LINE L2 -583 2731 2685 691 282 158 11 chr20 12163980 12164246 -59989636 - MER115 DNA AcHobo -384 309 5 767 152 45 0 chr20 12164264 12164396 -59989486 - MER20 DNA MER1_type -23 196 59 236 61 0 0 chr20 12164396 12164429 -59989453 + L1PA3 LINE L1 6116 6148 -7 314 148 0 0 chr20 12164461 12164515 -59989367 - MER20 DNA MER1_type -163 56 3 2846 65 3 0 chr20 12164953 12165321 -59988561 + L1PA8 LINE L1 5804 6172 0 28 0 0 0 chr20 12165443 12165471 -59988411 + AT_rich Low_complexity Low_complexity 1 28 0 786 180 145 25 chr20 12165600 12165800 -59988082 + MER58A DNA MER1_type 1 224 0 2040 132 17 0 chr20 12167316 12167611 -59986271 + AluSq SINE Alu 1 300 -13 2030 129 0 7 chr20 12167641 12167960 -59985922 - AluSx SINE Alu 0 317 1 243 288 122 36 chr20 12167978 12168117 -59985765 + L2 LINE L2 3122 3272 0 199 323 32 21 chr20 12168227 12168320 -59985562 - MIR3 SINE MIR -11 197 104 552 126 11 21 chr20 12168560 12168655 -59985227 - MLT1A1 LTR MaLR 0 365 272 * 1271 198 27 45 chr20 12168647 12168980 -59984902 - MLT1A1 LTR MaLR -38 327 1 340 235 29 44 chr20 12169034 12169170 -59984712 + L1MC5 LINE L1 7336 7469 -492 2114 126 10 0 chr20 12169190 12169484 -59984398 + AluSx SINE Alu 1 297 -15 262 226 45 73 chr20 12169559 12169736 -59984146 + L1MC5 LINE L1 7609 7780 -181 233 152 22 0 chr20 12169770 12169816 -59984066 + (TTG)n Simple_repeat Simple_repeat 2 48 0 3573 152 94 61 chr20 12170159 12170815 -59983067 - MER4D LTR ERV1 0 903 209 1537 182 77 3 chr20 12170815 12171101 -59982781 + AluJo SINE Alu 1 307 -5 3573 152 94 61 chr20 12171101 12171315 -59982567 - MER4D LTR ERV1 -694 209 4 189 226 0 65 chr20 12171319 12171381 -59982501 + L3 LINE CR1 1209 1266 -311 286 128 0 0 chr20 12171497 12171544 -59982338 - MER41B LTR ERV1 0 635 589 * 2788 83 13 0 chr20 12171525 12171921 -59981961 - MER41A LTR ERV1 -153 401 1 521 266 152 6 chr20 12172149 12172307 -59981575 - MER5A DNA MER1_type 0 189 9 510 236 98 60 chr20 12172657 12173094 -59980788 + L1MC5 LINE L1 7390 7843 -118 1360 215 23 39 chr20 12173095 12173528 -59980354 - L1MD3 LINE L1 -1 7994 7569 244 250 21 21 chr20 12173529 12173625 -59980257 + L1MC5 LINE L1 7833 7928 -33 294 324 0 18 chr20 12173636 12173747 -59980135 - MIR SINE MIR -137 125 17 195 69 0 0 chr20 12174088 12174117 -59979765 + (TC)n Simple_repeat Simple_repeat 2 30 0 235 409 91 17 chr20 12174626 12174856 -59979026 - L2 LINE L2 -33 3239 2993 189 304 54 0 chr20 12176655 12176711 -59977171 + MIR3 SINE MIR 96 154 -54 301 304 40 0 chr20 12176891 12177016 -59976866 + MLT1I LTR MaLR 16 145 -264 226 242 32 42 chr20 12177185 12177280 -59976602 + MLT1I LTR MaLR 316 409 0 314 311 59 25 chr20 12178165 12178284 -59975598 + MIR3 SINE MIR 52 174 -34 834 247 69 100 chr20 12178480 12178901 -59974981 + MLT1J LTR MaLR 100 507 -4 462 250 32 16 chr20 12178916 12179040 -59974842 - MER5A DNA MER1_type -3 186 61 536 128 0 0 chr20 12179100 12179178 -59974704 - MER5A DNA MER1_type -111 78 1 485 129 11 0 chr20 12180316 12180409 -59973473 + CT-rich Low_complexity Low_complexity 3 96 0 870 165 142 52 chr20 12180446 12180713 -59973169 - L1ME2 LINE L1 -19 6145 5855 609 324 65 49 chr20 12181568 12182000 -59971882 + L2 LINE L2 2809 3247 -66 312 250 109 71 chr20 12182001 12182185 -59971697 - MLT1H LTR MaLR -1 548 358 242 189 0 19 chr20 12182258 12182311 -59971571 - MLT1I LTR MaLR -264 145 94 209 431 0 10 chr20 12182644 12182746 -59971136 - MER91A DNA MER1_type -94 102 2 2397 65 0 3 chr20 12183038 12183347 -59970535 - AluY SINE Alu -3 308 1 2197 193 42 2 chr20 12183610 12184020 -59969862 + MSTB LTR MaLR 1 426 0 183 205 0 0 chr20 12185056 12185095 -59968787 + (CAT)n Simple_repeat Simple_repeat 2 40 0 368 221 163 0 chr20 12185513 12185599 -59968283 - MER5A DNA MER1_type -83 106 7 224 206 10 52 chr20 12185934 12186031 -59967851 + (TTATA)n Simple_repeat Simple_repeat 5 97 0 1974 176 0 0 chr20 12186423 12186724 -59967158 - AluSx SINE Alu -7 305 5 1439 215 25 30 chr20 12187772 12188139 -59965743 - MLT1A1 LTR MaLR 0 365 1 508 302 88 14 chr20 12188261 12188476 -59965406 - MIR SINE MIR -15 247 17 1752 186 16 3 chr20 12188675 12188982 -59964900 - AluJo SINE Alu -1 311 1 186 43 0 0 chr20 12188997 12189020 -59964862 + (A)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr20 12189473 12189495 -59964387 + AT_rich Low_complexity Low_complexity 1 22 0 271 164 109 125 chr20 12190452 12190580 -59963302 + MLT1H LTR MaLR 424 549 0 258 273 43 58 chr20 12190946 12191085 -59962797 + Charlie8 DNA MER1_type 127 263 -2154 231 228 35 0 chr20 12191265 12191322 -59962560 - MER94 DNA DNA -1 133 75 977 177 108 100 chr20 12191363 12191642 -59962240 - MLT1G LTR MaLR -220 375 54 673 326 96 47 chr20 12191885 12192367 -59961515 - LTR67 LTR ERVL 0 557 45 2152 108 59 0 chr20 12192367 12192654 -59961228 + AluSx SINE Alu 1 304 -8 673 326 96 47 chr20 12192654 12192701 -59961181 - LTR67 LTR ERVL -512 45 2 1760 71 4 0 chr20 12192955 12193181 -59960701 - AluY SINE Alu 0 311 85 235 346 58 10 chr20 12193623 12193727 -59960155 - MIR SINE MIR -81 127 19 1252 260 74 44 chr20 12193770 12194297 -59959585 - MLT1H LTR MaLR -6 543 1 215 288 62 25 chr20 12194302 12194382 -59959500 - L2 LINE L2 0 3313 3231 300 320 72 0 chr20 12194976 12195129 -59958753 + L1MEd LINE L1 36 199 -5920 482 71 14 0 chr20 12195416 12195486 -59958396 - Alu SINE Alu -8 302 232 267 262 24 54 chr20 12195852 12196020 -59957862 + L1MEd LINE L1 865 1027 -5092 2486 167 5 32 chr20 12197325 12197763 -59956119 - MSTB LTR MaLR 0 426 1 25 31 0 0 chr20 12197772 12197804 -59956078 + AT_rich Low_complexity Low_complexity 1 32 0 691 341 77 10 chr20 12197825 12198124 -59955758 + MER115 DNA AcHobo 1 319 -374 464 330 43 13 chr20 12198326 12198559 -59955323 + LTR16C LTR ERVL 97 336 -155 217 229 0 0 chr20 12199168 12199216 -59954666 + L2 LINE L2 3262 3309 -4 266 227 50 42 chr20 12199781 12199900 -59953982 + MER104 DNA Tc2 4 123 -57 3808 160 73 21 chr20 12200352 12201190 -59952692 + L1MB7 LINE L1 5298 6178 -6 822 203 34 0 chr20 12201191 12201339 -59952543 + FRAM SINE Alu 1 145 -31 21 57 0 0 chr20 12201358 12201393 -59952489 + AT_rich Low_complexity Low_complexity 1 35 0 1453 172 0 111 chr20 12201775 12202158 -59951724 - AluJo SINE Alu 0 346 1 583 223 36 14 chr20 12202463 12202602 -59951280 + MLT1H LTR MaLR 122 263 -286 678 207 0 0 chr20 12202604 12202749 -59951133 - L1MB7 LINE L1 -251 5933 5789 445 295 50 54 chr20 12202760 12203038 -59950844 + MLT1H LTR MaLR 273 549 0 264 322 127 0 chr20 12203046 12203164 -59950718 - L2 LINE L2 -164 3108 2976 1052 252 49 31 chr20 12203404 12203900 -59949982 + MLT1G1 LTR MaLR 1 520 -70 7080 149 22 6 chr20 12203900 12206238 -59947644 + L1MA3 LINE L1 3920 6294 -11 301 227 0 34 chr20 12206250 12206338 -59947544 + MLT1F LTR MaLR 458 542 0 195 204 0 0 chr20 12206523 12206567 -59947315 + GA-rich Low_complexity Low_complexity 3 46 0 27 29 0 0 chr20 12208092 12208126 -59945756 + AT_rich Low_complexity Low_complexity 1 34 0 279 0 0 0 chr20 12210347 12210378 -59943504 + (CA)n Simple_repeat Simple_repeat 1 31 0 684 125 59 88 chr20 12210404 12210540 -59943342 + AluSq/x SINE Alu 3 134 -178 2093 150 3 6 chr20 12210541 12210894 -59942988 + AluSx SINE Alu 1 352 0 258 178 0 0 chr20 12211097 12211142 -59942740 - L1ME3A LINE L1 -60 6110 6066 214 338 12 0 chr20 12211659 12211739 -59942143 - MER5A DNA MER1_type -84 105 25 22 0 0 0 chr20 12212015 12212037 -59941845 + AT_rich Low_complexity Low_complexity 1 22 0 608 257 45 14 chr20 12212158 12212380 -59941502 + MER46C DNA MER2_type 109 337 -1 2952 110 14 49 chr20 12212428 12212920 -59940962 + L1PA16 LINE L1 5683 6157 -9 25 0 0 0 chr20 12212920 12212945 -59940937 + AT_rich Low_complexity Low_complexity 1 25 0 267 19 38 57 chr20 12212953 12213006 -59940876 + (TAAAAA)n Simple_repeat Simple_repeat 4 55 0 23 0 0 0 chr20 12213738 12213761 -59940121 + AT_rich Low_complexity Low_complexity 1 23 0 481 203 174 81 chr20 12214076 12214312 -59939570 - MER102a DNA MER1_type 0 330 73 1085 286 63 38 chr20 12214622 12215143 -59938739 + MLT1H LTR MaLR 3 536 -13 186 152 66 13 chr20 12216163 12216314 -59937568 + (TA)n Simple_repeat Simple_repeat 1 159 0 30 45 0 0 chr20 12216678 12216722 -59937160 + AT_rich Low_complexity Low_complexity 1 44 0 229 248 30 75 chr20 12216774 12216907 -59936975 + L1MC/D LINE L1 5575 5701 -2107 325 266 78 8 chr20 12217003 12217131 -59936751 - L1MC4 LINE L1 -87 7955 7819 386 245 130 74 chr20 12217154 12217423 -59936459 - L1MC4a LINE L1 -1344 6464 6181 294 29 0 0 chr20 12217446 12217481 -59936401 + (TG)n Simple_repeat Simple_repeat 2 36 0 820 188 6 0 chr20 12217503 12217684 -59936198 - L1MA7 LINE L1 -10 6281 6100 427 294 129 76 chr20 12218815 12219250 -59934632 + L1MEd LINE L1 266 723 -5396 26 0 0 0 chr20 12219518 12219544 -59934338 + AT_rich Low_complexity Low_complexity 1 26 0 358 341 23 0 chr20 12219706 12219838 -59934044 + MIR SINE MIR 84 218 -44 22 0 0 0 chr20 12220492 12220514 -59933368 + AT_rich Low_complexity Low_complexity 1 22 0 612 200 160 27 chr20 12220635 12220785 -59933097 - MER5A DNA MER1_type -18 171 2 356 287 66 16 chr20 12221390 12221512 -59932370 - MIR3 SINE MIR -29 179 52 592 279 87 98 chr20 12221529 12222048 -59931834 + MLT1H LTR MaLR 1 513 -36 392 99 0 14 chr20 12222442 12222513 -59931369 + L1PA2 LINE L1 6082 6151 -4 1927 142 0 7 chr20 12222773 12223061 -59930821 + AluSx SINE Alu 1 286 -26 367 197 0 26 chr20 12223739 12223815 -59930067 - MIR SINE MIR 0 262 189 381 231 39 0 chr20 12225114 12225218 -59928664 - Charlie8 DNA MER1_type -2251 166 59 601 313 20 15 chr20 12226024 12226222 -59927660 + MLT1J2 LTR MaLR 252 450 0 300 293 100 53 chr20 12227149 12227299 -59926583 - L2 LINE L2 0 3272 3116 818 235 16 5 chr20 12228085 12228272 -59925610 + MER5A DNA MER1_type 1 189 0 1100 246 14 14 chr20 12228627 12228903 -59924979 + LTR16C LTR ERVL 215 490 -1 24 0 0 0 chr20 12229643 12229667 -59924215 + AT_rich Low_complexity Low_complexity 1 24 0 248 227 0 0 chr20 12229914 12229958 -59923924 - Alu SINE Alu -178 124 81 2430 63 0 0 chr20 12229958 12230244 -59923638 - AluSc SINE Alu -10 299 14 270 167 0 0 chr20 12230244 12230286 -59923596 - Alu SINE Alu -255 44 3 305 274 247 68 chr20 12231484 12231674 -59922208 - MIR SINE MIR -10 252 29 242 218 359 0 chr20 12232224 12232351 -59921531 + MER5A DNA MER1_type 4 186 -3 180 0 0 0 chr20 12232774 12232794 -59921088 + (T)n Simple_repeat Simple_repeat 1 20 0 914 272 54 48 chr20 12233548 12234330 -59919552 + L1ME3A LINE L1 5068 5852 -318 1153 226 67 81 chr20 12234447 12234868 -59919014 + MLT1H LTR MaLR 135 549 0 411 200 234 11 chr20 12234893 12235068 -59918814 - L1ME3A LINE L1 -73 6097 5884 1887 123 0 4 chr20 12235069 12235338 -59918544 - AluSx SINE Alu -9 303 36 230 260 13 13 chr20 12235505 12235582 -59918300 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 1138 229 134 25 chr20 12238051 12238453 -59915429 + L1ME3A LINE L1 5687 6132 -38 648 202 193 14 chr20 12239608 12239826 -59914056 - L1ME3A LINE L1 -227 5943 5687 210 156 0 0 chr20 12239962 12240007 -59913875 + A-rich Low_complexity Low_complexity 1 45 0 355 269 57 21 chr20 12240058 12240199 -59913683 - MER117 DNA MER1_type -46 151 6 465 264 31 21 chr20 12240481 12240674 -59913208 - Charlie8 DNA MER1_type -2152 265 71 1707 197 25 27 chr20 12240831 12241197 -59912685 - MLT1A1 LTR MaLR 0 365 1 385 226 123 123 chr20 12241629 12241679 -59912203 + MIR SINE MIR 4 53 -209 2416 78 0 0 chr20 12241679 12241974 -59911908 - AluSc SINE Alu -14 295 1 385 226 123 123 chr20 12241974 12241996 -59911886 + MIR SINE MIR 53 74 -188 2237 110 0 19 chr20 12241996 12242313 -59911569 - AluSx SINE Alu -1 311 1 385 226 123 123 chr20 12242313 12242482 -59911400 + MIR SINE MIR 73 246 -16 235 322 23 23 chr20 12242873 12242960 -59910922 + MER5A DNA MER1_type 8 94 -95 1486 233 149 67 chr20 12243113 12243502 -59910380 + MER21B LTR ERV1 1 357 -506 1247 184 66 63 chr20 12243502 12243866 -59910016 + MLT1A1 LTR MaLR 1 365 0 1486 233 149 67 chr20 12243866 12244175 -59909707 + MER21B LTR ERV1 357 756 -107 767 213 58 35 chr20 12244567 12244741 -59909141 + MER5B DNA MER1_type 1 178 0 270 322 34 39 chr20 12244797 12245002 -59908880 - MER102b DNA MER1_type -51 290 87 431 216 121 70 chr20 12245100 12245274 -59908608 + MER5A DNA MER1_type 6 189 0 2063 114 172 5 chr20 12245321 12245688 -59908194 + MSTA LTR MaLR 1 428 0 342 323 13 66 chr20 12245805 12246031 -59907851 - L1M4 LINE L1 -3421 2725 2512 356 215 98 78 chr20 12246032 12246100 -59907782 + L1M4 LINE L1 2298 2363 -3783 901 176 96 0 chr20 12246100 12246287 -59907595 + MER3 DNA MER1_type 1 205 -4 356 215 98 78 chr20 12246287 12246423 -59907459 + L1M4 LINE L1 2363 2506 -3640 2397 83 0 13 chr20 12246564 12246878 -59907004 - AluY SINE Alu -1 310 1 757 199 33 13 chr20 12247119 12247270 -59906612 - FRAM SINE Alu -12 154 1 873 254 144 22 chr20 12247272 12247736 -59906146 + Charlie7 DNA MER1_type 238 758 -1854 827 204 86 51 chr20 12247724 12248037 -59905845 + Charlie7 DNA MER1_type 2096 2419 -193 * 31 26 0 0 chr20 12248054 12248092 -59905790 + AT_rich Low_complexity Low_complexity 1 38 0 493 107 0 0 chr20 12248603 12248678 -59905204 + MADE1 DNA Mariner 6 80 0 1806 163 78 32 chr20 12248751 12249188 -59904694 + LTR2B LTR ERV1 34 490 0 31 26 0 0 chr20 12249433 12249471 -59904411 + AT_rich Low_complexity Low_complexity 1 38 0 2072 113 3 64 chr20 12250569 12250896 -59902986 + AluSq SINE Alu 1 307 -6 2147 107 31 0 chr20 12251660 12251949 -59901933 - AluSx SINE Alu -14 298 1 23 54 0 0 chr20 12251954 12251991 -59901891 + AT_rich Low_complexity Low_complexity 1 37 0 12470 194 42 10 chr20 12252206 12255235 -59898647 - ERVL-D LTR ERVL -2564 3200 2 287 146 0 0 chr20 12255236 12255284 -59898598 - MLT2D LTR ERVL 0 414 367 235 224 0 0 chr20 12255345 12255394 -59898488 - MLT2B1 LTR ERVL -471 49 1 985 222 112 102 chr20 12255422 12255895 -59897987 + MLT1H LTR MaLR 68 545 -4 782 289 116 34 chr20 12256423 12256581 -59897301 + L2 LINE L2 2830 2974 -339 1479 163 21 146 chr20 12256581 12256869 -59897013 + MLT2D LTR ERVL 1 209 -205 2271 107 20 0 chr20 12256869 12257168 -59896714 - AluSx SINE Alu -1 311 7 1479 163 21 146 chr20 12257168 12257352 -59896530 + MLT2D LTR ERVL 209 414 0 782 289 116 34 chr20 12257352 12257633 -59896249 + L2 LINE L2 2974 3305 -8 1014 237 137 60 chr20 12257915 12258209 -59895673 - MLT1D LTR MaLR -1 504 159 2784 93 0 3 chr20 12258209 12258573 -59895309 + THE1B LTR MaLR 2 364 0 1014 237 137 60 chr20 12258573 12258746 -59895136 - MLT1D LTR MaLR -346 159 1 292 173 0 0 chr20 12259640 12259692 -59894190 + MER66B LTR ERV1 296 347 -139 1015 49 28 0 chr20 12259692 12259836 -59894046 + (GAAA)n Simple_repeat Simple_repeat 1 148 0 1059 183 0 6 chr20 12259897 12260072 -59893810 + AluJo SINE Alu 122 295 -17 1308 134 5 14 chr20 12260313 12260522 -59893360 - U17 snRNA snRNA 0 207 1 451 284 226 26 chr20 12261227 12261533 -59892349 + L2 LINE L2 2608 2974 -340 253 281 90 24 chr20 12262556 12262723 -59891159 - L1MC4 LINE L1 -1 8041 7864 1209 229 36 0 chr20 12263703 12264008 -59889874 - MER58B DNA MER1_type 0 341 26 1007 198 10 10 chr20 12264021 12264228 -59889654 + MER3 DNA MER1_type 3 209 0 2516 65 0 3 chr20 12265183 12265491 -59888391 - AluY SINE Alu -2 309 3 1059 334 73 54 chr20 12265537 12266628 -59887254 + L2 LINE L2 2213 3312 -1 1499 177 22 87 chr20 12268171 12268284 -59885598 + MER2 DNA MER2_type 1 120 -224 2116 136 0 0 chr20 12268284 12268586 -59885296 + AluSx SINE Alu 1 302 -10 1499 177 22 87 chr20 12268586 12268840 -59885042 + MER2 DNA MER2_type 120 344 0 391 284 10 29 chr20 12269307 12269409 -59884473 + L2 LINE L2 3210 3309 -4 244 310 267 26 chr20 12269507 12269810 -59884072 - L2 LINE L2 0 3313 2938 537 16 0 0 chr20 12270148 12270210 -59883672 + (TA)n Simple_repeat Simple_repeat 2 63 0 2321 97 3 0 chr20 12270210 12270508 -59883374 - AluSg SINE Alu -11 299 1 24 32 0 0 chr20 12270508 12270539 -59883343 + AT_rich Low_complexity Low_complexity 1 31 0 1142 291 42 14 chr20 12270773 12271411 -59882471 - L1ME3A LINE L1 -217 5936 5281 258 200 50 12 chr20 12271426 12271506 -59882376 + (TATAA)n Simple_repeat Simple_repeat 4 86 0 394 141 106 0 chr20 12271625 12271710 -59882172 - MER2 DNA MER2_type -134 211 118 29 28 0 0 chr20 12271722 12271758 -59882124 + AT_rich Low_complexity Low_complexity 1 36 0 266 272 0 2 chr20 12271889 12271984 -59881898 + L1ME LINE L1 5489 5579 -542 373 219 10 42 chr20 12271991 12272087 -59881795 - MER2 DNA MER2_type -249 96 4 847 289 72 26 chr20 12272132 12272746 -59881136 - L1ME3A LINE L1 -942 5187 4538 1715 75 0 9 chr20 12272746 12272959 -59880923 - AluSg/x SINE Alu -12 298 88 847 289 72 26 chr20 12272959 12273006 -59880876 - L1ME3A LINE L1 -1591 4538 4495 24 0 0 0 chr20 12273113 12273137 -59880745 + AT_rich Low_complexity Low_complexity 1 24 0 599 271 114 14 chr20 12273625 12274065 -59879817 - L1ME3A LINE L1 -5009 1110 627 343 250 60 20 chr20 12274134 12274234 -59879648 - HAL1 LINE L1 -1074 1433 1330 275 268 12 24 chr20 12274246 12274328 -59879554 - L1ME3A LINE L1 -5594 525 445 748 267 84 5 chr20 12275145 12275512 -59878370 - HAL1 LINE L1 -856 1651 1256 226 250 33 0 chr20 12276824 12276884 -59876998 + MIR3 SINE MIR 108 169 -39 297 0 0 0 chr20 12277096 12277129 -59876753 + (CA)n Simple_repeat Simple_repeat 2 34 0 363 154 0 0 chr20 12277143 12277208 -59876674 + (TGGA)n Simple_repeat Simple_repeat 4 68 0 1830 163 14 7 chr20 12277864 12278159 -59875723 - AluJo SINE Alu -15 297 1 388 161 0 0 chr20 12280208 12280270 -59873612 + L1PA15-16 LINE L1 1512 1573 -5276 581 295 106 44 chr20 12280351 12280717 -59873165 + L2 LINE L2 1709 2112 -1202 1889 156 0 29 chr20 12280717 12281025 -59872857 - AluJb SINE Alu -13 299 1 581 295 106 44 chr20 12281025 12281132 -59872750 + L2 LINE L2 2112 2211 -1103 189 264 28 69 chr20 12281399 12281471 -59872411 + MIR SINE MIR 64 132 -76 460 254 41 24 chr20 12282112 12282281 -59871601 + MER63B DNA MER1_type 1 172 -264 1606 163 10 43 chr20 12282399 12282699 -59871183 + AluJb SINE Alu 1 290 -22 810 169 21 11 chr20 12282724 12282913 -59870969 + MER63B DNA MER1_type 245 435 0 1360 201 42 77 chr20 12283153 12283555 -59870327 + MLT1B LTR MaLR 3 390 0 190 319 88 11 chr20 12283649 12283740 -59870142 + L2 LINE L2 2995 3092 -180 792 181 6 33 chr20 12283838 12284020 -59869862 - MER3 DNA MER1_type -78 131 2 331 238 0 0 chr20 12284066 12284129 -59869753 + L2 LINE L2 3246 3308 -5 344 299 90 24 chr20 12284645 12284812 -59869070 - L3b LINE CR1 -122 1461 1284 183 197 82 66 chr20 12284907 12284968 -59868914 + L2 LINE L2 3251 3312 -1 208 176 0 0 chr20 12285812 12285846 -59868036 - MIR SINE MIR -116 146 113 311 285 162 8 chr20 12285957 12286136 -59867746 + MIR SINE MIR 42 262 0 2341 82 3 38 chr20 12286682 12286999 -59866883 - AluSq SINE Alu -7 306 1 2139 99 3 0 chr20 12287614 12287934 -59865948 + AluSp SINE Alu 1 321 0 468 258 151 19 chr20 12288397 12288556 -59865326 + MER5A DNA MER1_type 10 189 0 950 262 100 57 chr20 12290116 12290834 -59863048 - L2 LINE L2 -2 3311 2559 232 231 0 0 chr20 12291215 12291267 -59862615 + (TG)n Simple_repeat Simple_repeat 1 52 0 1895 161 9 9 chr20 12291669 12292004 -59861878 - MER2 DNA MER2_type -7 338 4 496 237 44 25 chr20 12292842 12293111 -59860771 + MLT2F LTR ERVL 1 321 -342 264 59 0 0 chr20 12293111 12293145 -59860737 + (TG)n Simple_repeat Simple_repeat 2 35 0 496 237 44 25 chr20 12293145 12293179 -59860703 + MLT2F LTR ERVL 321 353 -310 305 250 169 12 chr20 12293207 12293367 -59860515 + MLT2F LTR ERVL 479 663 0 1932 161 0 10 chr20 12293496 12293795 -59860087 - AluSx SINE Alu -16 296 1 229 299 65 55 chr20 12294063 12294388 -59859494 + L1MEd LINE L1 895 1222 -4897 365 241 69 28 chr20 12294515 12294660 -59859222 + L1MEd LINE L1 1379 1529 -4600 24 0 0 0 chr20 12295276 12295300 -59858582 + AT_rich Low_complexity Low_complexity 1 24 0 1485 102 5 14 chr20 12295802 12296018 -59857864 - AluSg/x SINE Alu -3 309 96 8434 59 6 9 chr20 12297241 12298316 -59855566 + MER11C LTR ERVK 1 1071 0 23 0 0 0 chr20 12298928 12298951 -59854931 + AT_rich Low_complexity Low_complexity 1 23 0 934 307 89 20 chr20 12299256 12299809 -59854073 + MLT1L LTR MaLR 20 610 -5 26 50 0 0 chr20 12300512 12300552 -59853330 + AT_rich Low_complexity Low_complexity 1 40 0 410 280 5 11 chr20 12301166 12301278 -59852604 + MER5B DNA MER1_type 49 173 -16 201 253 103 46 chr20 12301984 12302071 -59851811 - L2 LINE L2 -26 3246 3155 1635 186 0 20 chr20 12302293 12302599 -59851283 - AluJo SINE Alu 0 312 13 195 414 131 0 chr20 12303942 12304041 -59849841 + L2 LINE L2 3160 3271 -1 2128 153 12 3 chr20 12304311 12304651 -59849231 + MER61A LTR ERV1 1 343 0 500 272 39 53 chr20 12304664 12304703 -59849179 - MIR SINE MIR -26 236 198 2244 94 3 50 chr20 12304703 12305022 -59848860 + AluSq SINE Alu 1 304 -9 500 272 39 53 chr20 12305022 12305188 -59848694 - MIR SINE MIR -64 198 34 456 228 87 40 chr20 12305582 12305731 -59848151 + MER5B DNA MER1_type 14 169 -9 276 254 0 0 chr20 12306218 12306273 -59847609 - L2 LINE L2 -8 3305 3251 598 237 116 0 chr20 12306302 12306466 -59847416 + MER5A DNA MER1_type 4 189 0 2091 132 0 0 chr20 12307130 12307426 -59846456 - AluSx SINE Alu -16 296 1 21 57 0 0 chr20 12307526 12307561 -59846321 + AT_rich Low_complexity Low_complexity 1 35 0 1490 181 7 18 chr20 12309041 12309322 -59844560 + AluJb SINE Alu 31 308 -4 277 241 107 62 chr20 12309356 12309468 -59844414 - L2 LINE L2 -3 3269 3153 2264 114 19 30 chr20 12309731 12310099 -59843783 + THE1B LTR MaLR 1 364 0 313 257 88 0 chr20 12310109 12310245 -59843637 + L1ME4a LINE L1 5756 5903 -218 492 32 0 0 chr20 12310258 12310320 -59843562 + (TG)n Simple_repeat Simple_repeat 1 62 0 278 304 18 27 chr20 12310801 12310913 -59842969 - MIR SINE MIR -56 206 96 198 103 0 0 chr20 12311236 12311265 -59842617 + (CAAAG)n Simple_repeat Simple_repeat 3 31 0 354 281 6 30 chr20 12311691 12311858 -59842024 + Charlie4 DNA MER1_type 20 182 -1779 411 289 211 7 chr20 12311975 12312127 -59841755 - MER5A DNA MER1_type -3 186 4 252 0 0 0 chr20 12312171 12312199 -59841683 + (T)n Simple_repeat Simple_repeat 1 28 0 186 380 28 0 chr20 12312413 12312484 -59841398 + L2 LINE L2 3186 3258 -14 1740 135 117 30 chr20 12313622 12313955 -59839927 + THE1B LTR MaLR 1 362 -2 2294 113 0 0 chr20 12313970 12314270 -59839612 - AluSx SINE Alu -12 300 1 876 276 114 48 chr20 12314422 12315036 -59838846 + L2 LINE L2 2676 3313 0 594 162 80 14 chr20 12315039 12315196 -59838686 + L1MB8 LINE L1 6010 6176 -2 743 314 13 8 chr20 12315329 12315565 -59838317 + MIR SINE MIR 10 246 -16 201 287 96 52 chr20 12315773 12315888 -59837994 - MER5A DNA MER1_type 0 189 70 * 400 278 119 0 chr20 12315879 12316005 -59837877 + MER5A DNA MER1_type 47 187 -2 200 176 0 0 chr20 12316360 12316394 -59837488 - L2 LINE L2 -13 3300 3267 207 0 0 0 chr20 12316610 12316633 -59837249 + (A)n Simple_repeat Simple_repeat 1 23 0 2124 144 0 0 chr20 12317717 12318015 -59835867 - AluSx SINE Alu -14 298 1 2461 88 10 0 chr20 12318748 12319056 -59834826 - AluSp SINE Alu -2 311 1 1595 156 25 32 chr20 12319523 12319805 -59834077 + AluJb SINE Alu 1 280 -32 309 26 0 0 chr20 12319807 12319845 -59834037 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 1153 152 39 76 chr20 12320304 12320634 -59833248 - MER33 DNA MER1_type -2 322 5 562 124 10 10 chr20 12320806 12320903 -59832979 + MER4A LTR ERV1 2 98 -566 1491 117 168 91 chr20 12320903 12321278 -59832604 + MER4A LTR ERV1 261 664 0 327 361 47 24 chr20 12321296 12321455 -59832427 + MIR3 SINE MIR 35 200 -8 2611 53 0 0 chr20 12321455 12321759 -59832123 + AluY SINE Alu 1 304 -7 35 24 0 0 chr20 12322411 12322453 -59831429 + AT_rich Low_complexity Low_complexity 1 42 0 364 331 15 0 chr20 12323025 12323158 -59830724 + MIR SINE MIR 84 218 -44 1549 209 55 44 chr20 12323163 12323506 -59830376 + MLT1C LTR MaLR 6 358 -109 1882 120 49 0 chr20 12323506 12323805 -59830077 - AluSg SINE Alu 0 312 1 1549 209 55 44 chr20 12323805 12323915 -59829967 + MLT1C LTR MaLR 358 465 -2 593 275 12 18 chr20 12324394 12324565 -59829317 + MER5A DNA MER1_type 20 189 0 492 270 8 0 chr20 12324710 12324836 -59829046 + L2 LINE L2 2527 2653 -661 255 198 247 0 chr20 12324855 12324936 -59828946 + MER5A DNA MER1_type 9 109 -80 681 311 115 26 chr20 12324990 12325581 -59828301 + L2 LINE L2 2666 3310 -3 1960 130 32 0 chr20 12325728 12326012 -59827870 + AluSx SINE Alu 1 293 -19 348 261 84 8 chr20 12326669 12326788 -59827094 + MIR SINE MIR 8 135 -127 1342 221 91 19 chr20 12326799 12327216 -59826666 - LTR16A1 LTR ERVL -2 455 9 262 283 11 33 chr20 12327220 12327312 -59826570 + MIR SINE MIR 140 229 -33 522 307 74 6 chr20 12327334 12327497 -59826385 + MER91B DNA MER1_type 15 188 -2 1966 138 0 10 chr20 12327529 12327825 -59826057 - AluSx SINE Alu -19 293 1 2074 101 10 49 chr20 12327888 12328021 -59825861 + AluSx SINE Alu 1 138 -174 2013 124 3 7 chr20 12328021 12328328 -59825554 + AluSx SINE Alu 1 306 0 2074 101 10 49 chr20 12328328 12328501 -59825381 + AluSx SINE Alu 138 296 -16 365 296 47 12 chr20 12328522 12328691 -59825191 + MER104 DNA MER2_type 4 178 -2 2127 92 7 10 chr20 12329485 12329780 -59824102 - AluSp SINE Alu -19 294 1 991 73 0 0 chr20 12329817 12329940 -59823942 + AluSq/x SINE Alu 5 127 -185 1788 118 4 0 chr20 12329940 12330185 -59823697 + AluSx SINE Alu 52 297 -15 1193 285 53 9 chr20 12330249 12330716 -59823166 - L1ME3A LINE L1 -6 6164 5677 239 237 40 0 chr20 12330733 12330809 -59823073 - L1ME3A LINE L1 -508 5613 5535 2077 140 3 10 chr20 12331502 12331810 -59822072 + AluSq SINE Alu 1 306 -7 1882 99 4 0 chr20 12331946 12332219 -59821663 + AluSp SINE Alu 40 313 0 2277 230 58 16 chr20 12332230 12332908 -59820974 + L1MC4a LINE L1 7099 7804 -4 2099 134 3 3 chr20 12333109 12333408 -59820474 - AluSx SINE Alu -13 299 1 202 363 110 7 chr20 12333617 12333763 -59820119 - L2 LINE L2 -8 3264 3104 345 47 0 0 chr20 12333811 12333854 -59820028 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 456 335 45 29 chr20 12333884 12334129 -59819753 + MIR SINE MIR 5 253 -9 289 267 172 36 chr20 12335071 12335292 -59818590 + MLT1H LTR MaLR 296 546 -3 905 229 8 68 chr20 12335296 12335532 -59818350 + MIR SINE MIR 15 236 -26 2270 112 62 69 chr20 12335551 12335999 -59817883 + MER65A LTR ERV1 1 445 0 217 242 30 61 chr20 12336088 12336154 -59817728 + L2 LINE L2 3206 3269 -3 233 347 147 6 chr20 12336813 12336983 -59816899 + Charlie8 DNA MER1_type 2 195 -2222 3080 123 34 38 chr20 12338313 12338817 -59815065 - MER1A DNA MER1_type 0 529 28 2432 88 3 0 chr20 12338898 12339195 -59814687 - AluSx SINE Alu -14 298 1 180 188 0 0 chr20 12339390 12339422 -59814460 - MIR SINE MIR -150 112 81 2458 48 0 29 chr20 12340463 12340773 -59813109 + AluY SINE Alu 1 301 -10 301 287 93 0 chr20 12341198 12341306 -59812576 + L1MC4 LINE L1 7924 8041 -1 250 331 71 31 chr20 12341640 12341767 -59812115 + L2 LINE L2 3182 3313 0 198 71 0 0 chr20 12341874 12341902 -59811980 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 911 201 34 0 chr20 12342423 12342602 -59811280 + MER5A DNA MER1_type 1 185 -4 405 257 221 7 chr20 12342609 12342745 -59811137 + MER5A DNA MER1_type 10 174 -15 877 261 11 14 chr20 12342758 12343042 -59810840 - L1MA9 LINE L1 -38 6274 5992 192 330 22 33 chr20 12343323 12343414 -59810468 + MIR SINE MIR 58 147 -115 194 0 39 0 chr20 12343910 12343936 -59809946 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 853 199 26 0 chr20 12343939 12344090 -59809792 - AluJb SINE Alu -30 282 128 463 235 10 0 chr20 12344713 12344815 -59809067 + MER5A DNA MER1_type 4 106 -83 780 295 12 52 chr20 12344873 12345062 -59808820 + MIR SINE MIR 22 200 -62 706 204 8 0 chr20 12345062 12345194 -59808688 + FLAM_C SINE Alu 1 133 0 780 295 12 52 chr20 12345194 12345255 -59808627 + MIR SINE MIR 200 262 0 305 279 102 14 chr20 12345444 12345475 -59808407 + L1ME4a LINE L1 5926 5953 -168 2231 116 0 0 chr20 12345475 12345777 -59808105 + AluSx SINE Alu 1 302 -10 305 279 102 14 chr20 12345777 12345892 -59807990 + L1ME4a LINE L1 5953 6085 -36 463 0 48 0 chr20 12347038 12347100 -59806782 + (TTTTA)n Simple_repeat Simple_repeat 2 66 0 796 201 28 0 chr20 12347103 12347247 -59806635 - AluJo SINE Alu -30 282 135 680 156 55 0 chr20 12347523 12347651 -59806231 - L1PA15 LINE L1 0 6165 6031 762 210 22 49 chr20 12348040 12348264 -59805618 - LTR16A1 LTR ERVL -8 449 232 2913 139 15 19 chr20 12348293 12348826 -59805056 + L1 LINE L1 3796 4326 -1820 360 123 14 27 chr20 12348826 12348896 -59804986 + L1MA3 LINE L1 6233 6304 -1 431 238 123 46 chr20 12348910 12349234 -59804648 + L1ME4a LINE L1 5743 6091 -30 336 214 27 0 chr20 12350292 12350404 -59803478 + (TCCA)n Simple_repeat Simple_repeat 3 117 0 939 134 0 0 chr20 12351697 12351824 -59802058 - AluJo SINE Alu -185 127 1 2105 128 7 7 chr20 12352533 12352838 -59801044 - AluSx SINE Alu -7 305 1 817 38 0 9 chr20 12353146 12353251 -59800631 - L1PA3 LINE L1 0 6155 6052 1655 0 0 0 chr20 12353251 12353443 -59800439 + L1P1 LINE L1 5385 5576 -579 316 305 6 85 chr20 12353709 12353873 -59800009 - MIR SINE MIR -6 256 106 1656 143 109 37 chr20 12354850 12355200 -59798682 + THE1C LTR MaLR 1 375 0 250 167 0 28 chr20 12357113 12357185 -59796697 + (TA)n Simple_repeat Simple_repeat 2 71 0 2465 44 0 47 chr20 12357546 12357867 -59796015 - AluY SINE Alu -5 306 1 387 0 0 0 chr20 12357879 12357922 -59795960 + (TTA)n Simple_repeat Simple_repeat 3 45 0 1549 48 0 0 chr20 12357922 12358109 -59795773 - L1PA3 LINE L1 -18 6137 5951 271 56 0 0 chr20 12358109 12358145 -59795737 + L1PA3 LINE L1 5921 5956 -199 362 125 89 30 chr20 12358796 12358964 -59794918 + (TA)n Simple_repeat Simple_repeat 2 179 0 22 88 0 0 chr20 12358969 12359026 -59794856 + AT_rich Low_complexity Low_complexity 1 57 0 258 121 0 72 chr20 12359097 12359180 -59794702 + (TATAA)n Simple_repeat Simple_repeat 3 79 0 402 250 139 49 chr20 12359187 12359531 -59794351 - L1ME LINE L1 -342 5779 5405 431 316 86 42 chr20 12359870 12360275 -59793607 + L1ME LINE L1 3692 4107 -2039 * 950 201 67 4 chr20 12360270 12360509 -59793373 + L1MA4 LINE L1 6045 6298 -2 21 57 0 0 chr20 12360812 12360847 -59793035 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr20 12360861 12360885 -59792997 + AT_rich Low_complexity Low_complexity 1 24 0 304 293 81 72 chr20 12360951 12361296 -59792586 + L1ME LINE L1 4487 4834 -1312 427 310 46 43 chr20 12361622 12361970 -59791912 + L1ME LINE L1 5312 5660 -461 21 71 0 0 chr20 12362067 12362109 -59791773 + AT_rich Low_complexity Low_complexity 1 42 0 697 272 24 0 chr20 12363389 12363558 -59790324 + MIR SINE MIR 28 200 -62 188 309 86 0 chr20 12363964 12364045 -59789837 - MIR SINE MIR -57 205 118 199 329 26 0 chr20 12364881 12364957 -59788925 - MIR3 SINE MIR -2 206 129 1652 133 91 34 chr20 12364962 12365315 -59788567 + THE1C LTR MaLR 1 373 -2 1261 107 51 23 chr20 12367474 12367689 -59786193 - L1PA13 LINE L1 -3 6160 5940 922 234 21 30 chr20 12367887 12368122 -59785760 + MIR SINE MIR 3 235 -27 946 197 0 75 chr20 12368688 12368901 -59784981 - AluJo SINE Alu -30 282 86 23 0 0 0 chr20 12370838 12370861 -59783021 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr20 12370875 12370899 -59782983 + AT_rich Low_complexity Low_complexity 1 24 0 2178 241 43 23 chr20 12371882 12372484 -59781398 - L1ME3A LINE L1 -1 6169 5556 1876 188 85 25 chr20 12372939 12373412 -59780470 + MLT1D LTR MaLR 3 503 -2 1815 115 9 96 chr20 12373475 12373798 -59780084 - AluSx SINE Alu -17 295 1 212 259 0 17 chr20 12375905 12375963 -59777919 + GA-rich Low_complexity Low_complexity 2 58 0 199 200 32 116 chr20 12376204 12376299 -59777583 + MIR SINE MIR 132 218 -44 673 184 177 19 chr20 12377431 12377589 -59776293 + MER5A DNA MER1_type 7 189 0 239 316 58 29 chr20 12377878 12378017 -59775865 - MER5A DNA MER1_type -29 160 18 377 209 0 44 chr20 12378092 12378183 -59775699 - MER5A DNA MER1_type -97 92 6 1993 128 33 7 chr20 12378224 12378528 -59775354 + AluSx SINE Alu 1 312 0 193 346 13 13 chr20 12379000 12379078 -59774804 - MIR SINE MIR -125 137 60 287 313 88 27 chr20 12379121 12379268 -59774614 + MER5A DNA MER1_type 12 167 -22 * 296 323 65 0 chr20 12379146 12379270 -59774612 - MER5A DNA MER1_type -26 163 32 2070 108 20 23 chr20 12379377 12379682 -59774200 - AluSc SINE Alu -1 308 5 434 182 196 28 chr20 12379804 12379947 -59773935 + MER117 DNA MER1_type 1 167 -30 988 265 8 36 chr20 12380502 12380755 -59773127 + MIR SINE MIR 15 260 -2 2222 91 3 0 chr20 12380919 12381204 -59772678 + AluSp SINE Alu 27 312 -1 2346 129 61 24 chr20 12381255 12381667 -59772215 + MSTA LTR MaLR 1 427 -1 1624 183 11 38 chr20 12383490 12383856 -59770026 - L1MB8 LINE L1 0 6178 5823 328 304 112 32 chr20 12383929 12384330 -59769552 - L1MB8 LINE L1 -337 5784 5352 572 253 71 13 chr20 12384695 12384849 -59769033 + MIR SINE MIR 22 184 -78 199 264 103 69 chr20 12384902 12384989 -59768893 - MIR SINE MIR -82 126 37 1240 312 112 18 chr20 12385170 12385322 -59768560 + L2 LINE L2 2440 2576 -737 582 333 79 11 chr20 12385322 12385701 -59768181 + MLT1I LTR MaLR 1 405 -4 1240 312 112 18 chr20 12385701 12386336 -59767546 + L2 LINE L2 2576 3313 0 497 174 37 64 chr20 12386411 12386519 -59767363 - MER58A DNA MER1_type 0 224 120 2076 206 60 27 chr20 12386519 12386970 -59766912 + MLT2B1 LTR ERVL 2 467 -53 613 264 0 0 chr20 12386997 12387122 -59766760 - MER58A DNA MER1_type 0 125 1 1977 157 3 3 chr20 12387330 12387635 -59766247 - AluSx SINE Alu -7 305 1 624 277 36 51 chr20 12388401 12388654 -59765228 - MIR SINE MIR -6 256 8 210 246 33 0 chr20 12388656 12388717 -59765165 + CT-rich Low_complexity Low_complexity 6 68 0 1222 248 40 83 chr20 12389959 12390488 -59763394 - L2 LINE L2 -4 3309 2804 699 245 74 0 chr20 12390587 12390750 -59763132 - MER96 DNA MER1_type 0 175 1 702 333 95 24 chr20 12392024 12392444 -59761438 + L2 LINE L2 340 789 -2525 509 316 25 22 chr20 12392507 12392830 -59761052 + MER115 DNA AcHobo 17 435 -258 * 1374 244 71 3 chr20 12392828 12393164 -59760718 + MER90 LTR ERV1 256 614 0 254 262 24 71 chr20 12393447 12393573 -59760309 + L1ME3 LINE L1 5966 6085 -77 449 262 69 50 chr20 12394297 12394499 -59759383 - MIR SINE MIR 0 262 57 21 0 0 0 chr20 12394653 12394674 -59759208 + AT_rich Low_complexity Low_complexity 1 21 0 2353 74 0 0 chr20 12394674 12394981 -59758901 + AluY SINE Alu 1 307 0 2798 200 48 18 chr20 12394982 12395708 -59758174 + L1M4 LINE L1 4421 5168 -978 1704 203 0 0 chr20 12395996 12396287 -59757595 - AluJo SINE Alu -21 291 1 185 344 122 0 chr20 12398511 12398601 -59755281 - L2 LINE L2 -38 3234 3134 591 303 143 65 chr20 12398619 12399177 -59754705 + MLT1L LTR MaLR 9 610 -5 25 65 0 0 chr20 12400369 12400415 -59753467 + AT_rich Low_complexity Low_complexity 1 46 0 1892 208 52 92 chr20 12400770 12401486 -59752396 + LTR8 LTR ERV1 5 691 0 6374 172 9 8 chr20 12402168 12404354 -59749528 + L1PB1 LINE L1 3958 6143 -8 26 0 0 0 chr20 12404354 12404380 -59749502 + AT_rich Low_complexity Low_complexity 1 26 0 1901 154 4 0 chr20 12404385 12404687 -59749195 + AluJo SINE Alu 4 306 0 667 213 59 95 chr20 12404794 12405015 -59748867 + L1MC4 LINE L1 6687 6992 -1050 377 239 97 9 chr20 12405480 12405593 -59748289 + Charlie4 DNA MER1_type 43 165 -1796 468 186 76 0 chr20 12405684 12405802 -59748080 + Charlie4 DNA MER1_type 1806 1932 -29 2052 111 0 42 chr20 12405951 12406257 -59747625 - AluSq SINE Alu -12 301 9 298 198 0 47 chr20 12407064 12407170 -59746712 + L1ME4a LINE L1 5987 6087 -34 1933 88 15 4 chr20 12407173 12407436 -59746446 + AluSx SINE Alu 21 286 -26 342 0 0 0 chr20 12407439 12407477 -59746405 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2440 68 0 3 chr20 12407523 12407817 -59746065 + AluY SINE Alu 1 293 -18 387 117 91 0 chr20 12408061 12408138 -59745744 - L1MA9 LINE L1 0 6312 6229 815 275 54 85 chr20 12408323 12408971 -59744911 - L1ME4a LINE L1 -3 6118 5491 1264 160 0 5 chr20 12409275 12409488 -59744394 - AluJo SINE Alu -100 212 1 208 360 132 0 chr20 12409568 12409682 -59744200 - L2 LINE L2 -1 3271 3143 279 273 13 0 chr20 12409903 12409980 -59743902 + MER116 DNA Mariner 1 78 -2 383 281 156 6 chr20 12410283 12410450 -59743432 + MER117 DNA MER1_type 1 192 -5 347 0 23 0 chr20 12410577 12410620 -59743262 + (TA)n Simple_repeat Simple_repeat 1 44 0 314 319 0 0 chr20 12410629 12410720 -59743162 - L1MC4 LINE L1 -1339 6703 6613 378 184 13 0 chr20 12410777 12410853 -59743029 - LTR37B LTR ERV1 -183 285 209 26 30 0 0 chr20 12410946 12410979 -59742903 + AT_rich Low_complexity Low_complexity 1 33 0 205 260 156 52 chr20 12411657 12411753 -59742129 + L3 LINE CR1 1472 1577 0 1121 277 103 14 chr20 12413229 12413735 -59740147 - HAL1 LINE L1 -105 2402 1852 2443 260 107 72 chr20 12413736 12414293 -59739589 - HAL1 LINE L1 -710 1797 1260 2101 93 3 40 chr20 12414293 12414595 -59739287 - AluSp SINE Alu -22 291 1 2443 260 107 72 chr20 12414595 12415320 -59738562 - HAL1 LINE L1 -1247 1260 438 1932 144 30 0 chr20 12415320 12415619 -59738263 - AluSx SINE Alu -4 308 1 2443 260 107 72 chr20 12415619 12416072 -59737810 - HAL1 LINE L1 -2069 438 2 451 257 45 54 chr20 12417377 12417599 -59736283 + L2 LINE L2 3013 3232 -81 764 233 48 15 chr20 12417619 12417825 -59736057 - LTR16C LTR ERVL -212 279 67 347 259 47 0 chr20 12417835 12417920 -59735962 + L2 LINE L2 3223 3311 -2 2227 106 0 0 chr20 12418550 12418877 -59735005 - AluSx SINE Alu 0 327 1 669 235 18 99 chr20 12419416 12419637 -59734245 - MIR SINE MIR -58 204 2 316 304 22 29 chr20 12419741 12419879 -59734003 - MIR SINE MIR -83 179 43 242 323 78 46 chr20 12421347 12421564 -59732318 - MIR SINE MIR 0 262 40 225 119 24 24 chr20 12422295 12422337 -59731545 + MIR SINE MIR 119 160 -102 229 182 68 0 chr20 12422477 12422521 -59731361 + L2 LINE L2 3267 3313 0 471 247 39 19 chr20 12423051 12423205 -59730677 + LTR16C LTR ERVL 335 491 0 1089 247 22 0 chr20 12425361 12425632 -59728250 - LTR16C LTR ERVL 0 491 215 293 239 45 0 chr20 12425780 12425847 -59728035 - MIR3 SINE MIR -50 158 89 1040 291 73 30 chr20 12426627 12427121 -59726761 + MLT1K LTR MaLR 73 587 -1 337 231 50 16 chr20 12428442 12428563 -59725319 + (TATATG)n Simple_repeat Simple_repeat 2 126 0 268 271 8 4 chr20 12428949 12429067 -59724815 + MER5A DNA MER1_type 15 183 -6 392 171 39 50 chr20 12429077 12429258 -59724624 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 414 208 46 6 chr20 12429286 12429459 -59724423 + (TA)n Simple_repeat Simple_repeat 1 180 0 366 161 81 0 chr20 12429445 12429594 -59724288 + (TATAA)n Simple_repeat Simple_repeat 1 161 0 * 227 187 41 0 chr20 12429594 12429765 -59724117 + (TA)n Simple_repeat Simple_repeat 1 178 0 307 337 82 25 chr20 12430621 12430817 -59723065 - MIR SINE MIR -3 259 53 30 0 0 0 chr20 12430930 12430960 -59722922 + AT_rich Low_complexity Low_complexity 1 30 0 2222 142 0 0 chr20 12431686 12431995 -59721887 - AluSx SINE Alu -1 311 3 206 247 221 26 chr20 12434013 12434090 -59719792 - MIR3 SINE MIR -25 183 92 365 289 33 8 chr20 12434555 12434676 -59719206 + CT-rich Low_complexity Low_complexity 6 129 0 191 323 0 0 chr20 12435415 12435477 -59718405 + L2 LINE L2 3210 3271 -1 245 275 143 11 chr20 12436305 12436396 -59717486 + L2 LINE L2 3211 3313 0 340 279 143 19 chr20 12437017 12437275 -59716607 + L2 LINE L2 3019 3308 -5 456 309 33 13 chr20 12437693 12437845 -59716037 - MIR SINE MIR -21 241 87 22 35 0 0 chr20 12438051 12438080 -59715802 + AT_rich Low_complexity Low_complexity 1 29 0 22 99 0 0 chr20 12438411 12438482 -59715400 + AT_rich Low_complexity Low_complexity 1 71 0 213 337 10 40 chr20 12439829 12439930 -59713952 + L2 LINE L2 2883 2980 -292 364 276 135 29 chr20 12439949 12440119 -59713763 + L2 LINE L2 3117 3304 -9 280 209 107 45 chr20 12440830 12441007 -59712875 - Charlie7 DNA MER1_type -8 2604 2417 * 389 210 91 35 chr20 12441000 12441035 -59712847 - Charlie7 DNA MER1_type -1891 721 689 2305 177 51 17 chr20 12441035 12441505 -59712377 - MER66B LTR ERV1 0 486 1 389 210 91 35 chr20 12441505 12441612 -59712270 - Charlie7 DNA MER1_type -1923 689 571 559 190 0 16 chr20 12441725 12441846 -59712036 - MSTC-int LTR MaLR -1615 120 2 2066 153 105 15 chr20 12441849 12442241 -59711641 - MSTC LTR MaLR -1 427 1 33 43 0 0 chr20 12442682 12442729 -59711153 + AT_rich Low_complexity Low_complexity 1 47 0 1897 189 0 3 chr20 12442736 12443049 -59710833 - AluJb SINE Alu 0 312 1 508 250 71 14 chr20 12443182 12443394 -59710488 + MER102b DNA MER1_type 118 341 0 801 236 120 27 chr20 12443856 12444148 -59709734 - L1ME3A LINE L1 -8 6162 5844 259 224 20 41 chr20 12444242 12444340 -59709542 + L1ME LINE L1 5609 5704 -466 225 234 0 31 chr20 12444965 12445029 -59708853 + T-rich Low_complexity Low_complexity 4 65 0 7214 44 15 32 chr20 12446384 12447950 -59705932 - SVA Other Other -799 1384 1 892 39 10 0 chr20 12447962 12448065 -59705817 - AluY SINE Alu -173 138 35 257 291 34 60 chr20 12448458 12448575 -59705307 - L2 LINE L2 -618 2696 2583 327 158 18 0 chr20 12448951 12449008 -59704874 - L1MC1 LINE L1 -283 6050 5993 29 28 0 0 chr20 12449092 12449128 -59704754 + AT_rich Low_complexity Low_complexity 1 36 0 233 336 103 30 chr20 12451980 12452251 -59701631 + MLT1J LTR MaLR 29 319 -192 2392 115 19 24 chr20 12452317 12452692 -59701190 + MER83C LTR ERV1 1 373 0 183 80 0 0 chr20 12452716 12452741 -59701141 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 301 276 112 26 chr20 12452838 12452990 -59700892 + MIR SINE MIR 91 255 -7 2429 65 3 7 chr20 12453513 12453821 -59700061 + AluY SINE Alu 1 307 -4 301 118 44 29 chr20 12456387 12456455 -59697427 + CT-rich Low_complexity Low_complexity 2 70 0 468 248 53 0 chr20 12456870 12456983 -59696899 + L2 LINE L2 3151 3269 -3 1052 252 192 19 chr20 12457530 12458057 -59695825 + L1ME3A LINE L1 5551 6168 -2 1915 279 75 47 chr20 12458090 12458558 -59695324 + L2 LINE L2 2058 2512 -801 423 0 0 0 chr20 12458558 12458605 -59695277 + (TG)n Simple_repeat Simple_repeat 2 48 0 1915 279 75 47 chr20 12458605 12459353 -59694529 + L2 LINE L2 2512 3313 0 324 48 0 0 chr20 12459639 12459681 -59694201 + (A)n Simple_repeat Simple_repeat 1 42 0 264 273 174 37 chr20 12460254 12460415 -59693467 + Charlie8 DNA MER1_type 2 184 -2233 796 176 98 0 chr20 12460430 12460583 -59693299 + MER5A DNA MER1_type 2 169 -20 1507 95 9 48 chr20 12461397 12461628 -59692254 + AluSc SINE Alu 76 297 -12 1213 87 10 29 chr20 12461628 12461928 -59691954 + (GAAA)n Simple_repeat Simple_repeat 1 360 0 28 79 0 0 chr20 12462422 12462485 -59691397 + AT_rich Low_complexity Low_complexity 1 63 0 2246 110 7 0 chr20 12462745 12463054 -59690828 - AluSx SINE Alu -1 311 1 213 224 190 17 chr20 12463543 12463601 -59690281 - MIR3 SINE MIR -52 156 89 2174 104 0 0 chr20 12465506 12465793 -59688089 - AluSx SINE Alu -7 305 19 273 88 349 17 chr20 12468781 12468866 -59685016 + MADE1 DNA Mariner 1 80 0 847 269 50 11 chr20 12468906 12469189 -59684693 - LTR16C LTR ERVL -2 489 196 1920 82 15 8 chr20 12469433 12469700 -59684182 - AluSc SINE Alu -9 300 32 276 320 164 0 chr20 12469799 12469927 -59683955 - MIR SINE MIR -69 193 45 1795 166 9 34 chr20 12470929 12471249 -59682633 - AluSx SINE Alu 0 312 1 652 338 5 0 chr20 12471263 12471467 -59682415 + MIR SINE MIR 44 248 -14 250 308 39 54 chr20 12471577 12471707 -59682175 - MIR SINE MIR -74 188 61 2232 88 54 0 chr20 12472258 12472552 -59681330 - AluSg SINE Alu 0 310 1 664 200 0 15 chr20 12473192 12473327 -59680555 - FLAM_C SINE Alu 0 133 1 227 147 0 0 chr20 12474055 12474089 -59679793 + MER63 DNA MER1_type 3 36 -174 220 167 33 0 chr20 12474090 12474150 -59679732 + A-rich Low_complexity Low_complexity 4 65 0 1557 210 44 5 chr20 12474156 12474523 -59679359 + MER63 DNA MER1_type 677 1057 -5 619 345 50 61 chr20 12475045 12475488 -59678394 - L2 LINE L2 0 3272 2835 290 333 26 11 chr20 12475585 12475774 -59678108 - L2 LINE L2 -763 2551 2360 327 239 137 43 chr20 12476882 12476999 -59676883 - MER5A DNA MER1_type -53 136 9 969 156 17 6 chr20 12477015 12477188 -59676694 + MER3 DNA MER1_type 1 128 -81 417 242 37 99 chr20 12477423 12477584 -59676298 + MIR SINE MIR 29 179 -83 348 218 0 0 chr20 12478137 12478224 -59675658 + (TA)n Simple_repeat Simple_repeat 2 88 0 245 259 0 0 chr20 12478287 12478341 -59675541 - MIR SINE MIR -32 230 177 21 0 0 0 chr20 12479080 12479101 -59674781 + AT_rich Low_complexity Low_complexity 1 21 0 423 38 0 0 chr20 12479241 12479294 -59674588 + (TG)n Simple_repeat Simple_repeat 1 53 0 264 314 105 12 chr20 12480157 12480631 -59673251 - L1MEc LINE L1 -4782 1528 970 661 240 64 56 chr20 12480641 12481001 -59672881 + LTR18A LTR ERVL 1 614 0 627 317 139 62 chr20 12481003 12481701 -59672181 - L1MEc LINE L1 -5158 961 210 7058 14 1 0 chr20 12481777 12482581 -59671301 + L1PA3 LINE L1 5351 6155 0 615 291 232 9 chr20 12482643 12483027 -59670855 - L3 LINE CR1 -603 974 471 2045 141 16 3 chr20 12483027 12483332 -59670550 - AluSx SINE Alu 0 312 4 615 291 232 9 chr20 12483332 12483404 -59670478 - L3 LINE CR1 -1106 471 416 1328 236 8 32 chr20 12484055 12484424 -59669458 + L1ME3 LINE L1 5802 6161 -1 216 233 78 112 chr20 12484546 12484662 -59669220 + MIR SINE MIR 119 230 -32 432 325 25 12 chr20 12484858 12485018 -59668864 - MIR SINE MIR -56 206 45 581 185 122 27 chr20 12485033 12485189 -59668693 - MER5A DNA MER1_type -9 180 4 3863 181 37 10 chr20 12485846 12486625 -59667257 - L1MB8 LINE L1 0 6178 5379 1065 167 93 0 chr20 12486635 12486839 -59667043 - AluJb SINE Alu -7 305 83 271 211 16 0 chr20 12486839 12486929 -59666953 - L1MB8 LINE L1 -800 5366 5276 200 119 0 24 chr20 12486951 12486993 -59666889 + (TTTTG)n Simple_repeat Simple_repeat 4 44 0 754 191 8 0 chr20 12488658 12488784 -59665098 + FLAM_A SINE Alu 1 127 -6 754 280 146 35 chr20 12488919 12489290 -59664592 - MLT1J2 LTR MaLR -18 432 21 700 277 190 33 chr20 12490224 12490685 -59663197 - L2 LINE L2 -1 3312 2784 375 41 0 0 chr20 12491094 12491143 -59662739 + (CA)n Simple_repeat Simple_repeat 1 49 0 743 180 0 0 chr20 12491399 12491521 -59662361 + FLAM_A SINE Alu 1 122 -11 388 226 57 19 chr20 12491546 12491652 -59662230 - MIR SINE MIR -79 183 74 331 208 65 0 chr20 12492061 12492138 -59661744 - MER5A DNA MER1_type -83 106 25 279 349 171 7 chr20 12492700 12492846 -59661036 - MER5A DNA MER1_type -6 183 14 357 352 31 0 chr20 12493102 12493230 -59660652 + MER5B DNA MER1_type 2 133 -45 292 272 328 0 chr20 12493218 12493343 -59660539 + MER5A DNA MER1_type 17 182 -7 * 2179 182 36 19 chr20 12493589 12494007 -59659875 - MSTB LTR MaLR 0 426 2 195 379 0 0 chr20 12494260 12494326 -59659556 - L2 LINE L2 -14 3299 3234 193 343 61 20 chr20 12494485 12494584 -59659298 - L2 LINE L2 -238 3034 2932 22 35 0 0 chr20 12494584 12494613 -59659269 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr20 12495346 12495377 -59658505 + AT_rich Low_complexity Low_complexity 1 31 0 1622 145 30 7 chr20 12496924 12497193 -59656689 + AluSx SINE Alu 1 275 -37 2374 104 0 0 chr20 12498187 12498496 -59655386 - AluSc SINE Alu 0 309 1 357 250 91 122 chr20 12500043 12500121 -59653761 + L2 LINE L2 2910 2989 -324 2201 121 3 0 chr20 12500121 12500419 -59653463 - AluSp SINE Alu -14 299 1 357 250 91 122 chr20 12500419 12500448 -59653434 + L2 LINE L2 2989 3017 -296 1893 120 52 3 chr20 12500448 12500739 -59653143 - AluSx SINE Alu -4 308 4 357 250 91 122 chr20 12500739 12500982 -59652900 + L2 LINE L2 3017 3250 -63 180 288 136 15 chr20 12501860 12501926 -59651956 + MER5A DNA MER1_type 42 115 -74 2392 103 33 11 chr20 12501965 12502332 -59651550 - THE1C LTR MaLR 0 375 1 2892 6 0 0 chr20 12502576 12502889 -59650993 - AluYb8 SINE Alu -5 313 1 180 158 0 0 chr20 12503198 12503236 -59650646 + (TG)n Simple_repeat Simple_repeat 2 39 0 294 231 26 0 chr20 12503989 12504067 -59649815 + LTR16A1 LTR ERVL 159 238 -219 660 205 84 0 chr20 12504413 12504579 -59649303 + LTR16A1 LTR ERVL 270 449 -8 343 258 70 37 chr20 12506263 12506498 -59647384 + MLT1I LTR MaLR 90 384 -25 1269 210 52 12 chr20 12506549 12506939 -59646943 - L1MC/D LINE L1 -569 5833 5509 351 181 0 0 chr20 12506944 12507016 -59646866 + (TA)n Simple_repeat Simple_repeat 2 73 0 679 215 55 36 chr20 12507038 12507312 -59646570 - L1MC/D LINE L1 -880 5502 5224 518 181 26 0 chr20 12507299 12507415 -59646467 - L1MC/D LINE L1 -1598 4784 4666 * 264 241 35 51 chr20 12507416 12507544 -59646338 - L1MDa LINE L1 -4897 1485 1283 1063 236 55 89 chr20 12507682 12508122 -59645760 - L1MDa LINE L1 -5935 628 204 210 37 0 0 chr20 12508565 12508592 -59645290 + (TG)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr20 12508943 12508969 -59644913 + (TG)n Simple_repeat Simple_repeat 1 26 0 196 281 52 42 chr20 12510911 12511007 -59642875 + MIR SINE MIR 91 187 -75 619 279 77 39 chr20 12511208 12511441 -59642441 - MIR SINE MIR 0 262 21 2506 68 0 0 chr20 12511480 12511791 -59642091 - AluY SINE Alu 0 311 1 199 346 148 36 chr20 12511815 12512199 -59641683 + L2 LINE L2 2864 3290 -23 1537 132 11 53 chr20 12512305 12512570 -59641312 + AluJb SINE Alu 1 254 -58 218 273 69 23 chr20 12512940 12513067 -59640815 - MIR SINE MIR -55 207 76 2084 124 7 3 chr20 12514190 12514489 -59639393 - AluSc SINE Alu -9 300 1 235 367 25 17 chr20 12514540 12514660 -59639222 - L2 LINE L2 0 3313 3193 435 222 65 24 chr20 12514749 12514905 -59638977 - MLT1I LTR MaLR -6 548 338 334 348 58 0 chr20 12515898 12516036 -59637846 - L2 LINE L2 0 3313 3168 379 361 27 32 chr20 12516817 12517036 -59636846 + MIR SINE MIR 12 229 -33 283 250 0 15 chr20 12517436 12517504 -59636378 + L2 LINE L2 3205 3271 -1 468 0 0 0 chr20 12517959 12518011 -59635871 + (TA)n Simple_repeat Simple_repeat 2 53 0 262 209 173 58 chr20 12519105 12519244 -59634638 + MIR SINE MIR 67 221 -41 22 35 0 0 chr20 12519917 12519946 -59633936 + AT_rich Low_complexity Low_complexity 1 29 0 990 296 42 15 chr20 12520200 12520535 -59633347 - MLT1I LTR MaLR -60 349 6 1352 199 34 24 chr20 12520967 12521259 -59632623 - AluJo SINE Alu -17 295 1 22 35 0 0 chr20 12522934 12522963 -59630919 + AT_rich Low_complexity Low_complexity 1 29 0 2397 158 16 23 chr20 12522991 12523427 -59630455 - Tigger2a DNA MER2_type -1 433 1 267 180 20 0 chr20 12523445 12523495 -59630387 - MER94 DNA DNA -79 55 5 266 254 14 0 chr20 12524277 12524348 -59629534 - LTR58 LTR ERV1 -249 430 359 1539 214 39 120 chr20 12524538 12525154 -59628728 - MER97b DNA MER1_type? -486 567 2 713 92 23 8 chr20 12525750 12525880 -59628002 + (TAGA)n Simple_repeat Simple_repeat 4 135 0 2431 79 0 16 chr20 12526467 12526784 -59627098 - AluSq SINE Alu 0 313 2 5366 145 26 54 chr20 12526952 12528079 -59625803 - L1MA7 LINE L1 0 6291 5195 270 109 23 46 chr20 12528655 12528730 -59625152 - L1MA7 LINE L1 0 6297 6230 2061 150 50 13 chr20 12528802 12529183 -59624699 - L1MA7 LINE L1 -37 6254 5860 318 162 59 15 chr20 12529222 12529290 -59624592 + L1ME3 LINE L1 5883 5953 -217 244 320 82 0 chr20 12529296 12529393 -59624489 + L1ME3 LINE L1 6008 6112 -50 1646 154 19 56 chr20 12529822 12530146 -59623736 + AluJo SINE Alu 1 312 0 840 140 11 101 chr20 12530179 12530251 -59623631 + AluJo SINE Alu 24 101 -211 2185 113 0 19 chr20 12530251 12530569 -59623313 + AluSx SINE Alu 1 312 0 840 140 11 101 chr20 12530569 12530675 -59623207 + AluJo SINE Alu 101 186 -126 460 299 153 0 chr20 12530933 12531090 -59622792 - MER5A DNA MER1_type 0 189 9 228 250 177 0 chr20 12531815 12531911 -59621971 - MLT1F LTR MaLR -19 523 411 2333 133 23 0 chr20 12531952 12532306 -59621576 - THE1B LTR MaLR -2 362 1 231 263 53 13 chr20 12532463 12532539 -59621343 - MLT1I LTR MaLR -266 143 65 429 20 0 0 chr20 12532759 12532809 -59621073 + (TA)n Simple_repeat Simple_repeat 2 51 0 196 313 100 0 chr20 12533119 12533199 -59620683 - L2 LINE L2 -236 3036 2949 887 173 6 6 chr20 12533431 12533587 -59620295 - LTR32 LTR ERVL 0 471 316 * 1914 142 41 38 chr20 12533586 12533930 -59619952 - LTR32 LTR ERVL -119 352 8 2386 82 0 0 chr20 12533996 12534288 -59619594 + AluSc SINE Alu 1 292 -17 445 164 0 0 chr20 12534296 12534369 -59619513 - AluJ/FRAM SINE Alu -16 296 224 253 352 30 91 chr20 12534671 12534708 -59619174 - L2 LINE L2 -4 3268 3230 3426 136 8 22 chr20 12534708 12535243 -59618639 - MER1A DNA MER1_type 0 527 1 253 352 30 91 chr20 12535243 12535569 -59618313 - L2 LINE L2 -42 3230 2927 849 236 56 20 chr20 12536613 12536899 -59616983 - L1ME3 LINE L1 -7 6155 5860 1374 168 4 4 chr20 12537526 12537752 -59616130 + AluJb SINE Alu 11 236 -76 549 145 8 97 chr20 12538325 12538449 -59615433 + LTR16A1 LTR ERVL 345 457 0 298 267 0 0 chr20 12539307 12539367 -59614515 - L2 LINE L2 -16 3297 3238 285 29 0 0 chr20 12539493 12539527 -59614355 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr20 12539560 12539592 -59614290 + (TC)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr20 12539591 12539616 -59614266 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 204 179 0 0 chr20 12540052 12540091 -59613791 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 29 28 0 0 chr20 12541123 12541159 -59612723 + AT_rich Low_complexity Low_complexity 1 36 0 432 325 12 6 chr20 12542089 12542249 -59611633 + L1ME3A LINE L1 5970 6130 -40 432 290 61 41 chr20 12543142 12543387 -59610495 + MIR SINE MIR 13 262 0 786 242 44 24 chr20 12543635 12543883 -59609999 + L1ME3 LINE L1 5908 6160 -2 21 36 0 0 chr20 12543900 12543928 -59609954 + AT_rich Low_complexity Low_complexity 1 28 0 233 281 27 68 chr20 12544040 12544186 -59609696 + L1ME LINE L1 5683 5822 -299 1753 196 71 51 chr20 12544194 12544644 -59609238 + L1ME2 LINE L1 5548 6006 -158 725 265 80 61 chr20 12545885 12546346 -59607536 - L1ME3 LINE L1 -447 5723 5254 496 327 64 11 chr20 12546394 12546752 -59607130 - L1ME3 LINE L1 -3094 3052 2676 385 324 77 31 chr20 12546852 12547074 -59606808 - L1M4 LINE L1 -1120 5026 4795 229 182 18 36 chr20 12547542 12547597 -59606285 + (TATG)n Simple_repeat Simple_repeat 2 55 0 244 258 45 0 chr20 12548837 12548926 -59604956 + GA-rich Low_complexity Low_complexity 4 96 0 7644 28 0 0 chr20 12548932 12550156 -59603726 - L1PA3 LINE L1 0 6155 4957 867 162 32 13 chr20 12550206 12550360 -59603522 - AluJo/FRAM SINE Alu -21 291 135 441 167 0 0 chr20 12550360 12550432 -59603450 - AluJ/FLAM SINE Alu -236 76 5 180 0 0 0 chr20 12551200 12551220 -59602662 + (A)n Simple_repeat Simple_repeat 1 20 0 243 88 0 0 chr20 12551297 12551331 -59602551 + (A)n Simple_repeat Simple_repeat 1 34 0 322 133 20 21 chr20 12551671 12551765 -59602117 + MER20 DNA MER1_type 21 215 -4 528 236 27 20 chr20 12551920 12552068 -59601814 + MER69 DNA AcHobo 1 149 -2377 23 0 0 0 chr20 12552068 12552091 -59601791 + AT_rich Low_complexity Low_complexity 1 23 0 409 270 87 44 chr20 12552586 12552939 -59600943 - MLT1F LTR MaLR -105 444 81 1788 150 49 14 chr20 12553112 12553714 -59600168 - MER50 LTR ERV1 0 734 1 1525 187 14 21 chr20 12554459 12554743 -59599139 - AluJo SINE Alu -30 282 1 2040 113 24 0 chr20 12554890 12555181 -59598701 - AluSx SINE Alu -14 298 1 216 261 77 15 chr20 12555630 12555695 -59598187 + L2 LINE L2 3218 3286 -27 907 127 11 17 chr20 12555711 12555892 -59597990 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr20 12556996 12557024 -59596858 + AT_rich Low_complexity Low_complexity 1 28 0 203 358 11 11 chr20 12557360 12557455 -59596427 - L2 LINE L2 -501 2813 2719 494 44 29 0 chr20 12557644 12557712 -59596170 + (GAAA)n Simple_repeat Simple_repeat 1 70 0 264 284 46 28 chr20 12558810 12558919 -59594963 - MIR3 SINE MIR -3 205 95 329 248 8 86 chr20 12559006 12559123 -59594759 - L2 LINE L2 0 3313 3206 336 207 0 0 chr20 12559170 12559228 -59594654 + MER5A DNA MER1_type 49 106 -83 359 309 20 13 chr20 12559327 12559476 -59594406 - L2 LINE L2 -455 2859 2710 676 274 74 0 chr20 12559510 12559700 -59594182 + L1ME1 LINE L1 5946 6149 -17 2047 109 87 6 chr20 12559745 12560092 -59593790 + THE1C LTR MaLR 1 375 0 770 128 7 28 chr20 12560147 12560288 -59593594 + L1PA16 LINE L1 6029 6166 0 293 310 26 69 chr20 12560452 12560674 -59593208 + MIR3 SINE MIR 5 216 -46 200 349 108 23 chr20 12561025 12561154 -59592728 - L2 LINE L2 0 3272 3133 604 342 57 53 chr20 12561316 12561822 -59592060 - L2 LINE L2 -384 2930 2423 268 261 81 9 chr20 12561917 12562028 -59591854 - MIR SINE MIR -56 206 88 2404 84 7 3 chr20 12562129 12562437 -59591445 + AluSg SINE Alu 1 309 -1 485 327 57 46 chr20 12563544 12564131 -59589751 + L2 LINE L2 2396 3060 -253 571 194 17 35 chr20 12564155 12564483 -59589399 + CT-rich Low_complexity Low_complexity 1 321 0 314 217 14 14 chr20 12564505 12564643 -59589239 + CT-rich Low_complexity Low_complexity 2 139 0 264 125 47 0 chr20 12564647 12564711 -59589171 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 314 312 65 43 chr20 12564748 12564934 -59588948 + L2 LINE L2 3123 3312 -1 1142 88 25 6 chr20 12565100 12565259 -59588623 + L1PA8 LINE L1 5998 6159 -13 33 0 0 0 chr20 12565278 12565311 -59588571 + AT_rich Low_complexity Low_complexity 1 33 0 1139 130 89 71 chr20 12565534 12565690 -59588192 + THE1C LTR MaLR 1 166 -209 1577 154 95 7 chr20 12565690 12565963 -59587919 - AluSx SINE Alu -12 300 4 1139 130 89 71 chr20 12565963 12566075 -59587807 + THE1C LTR MaLR 166 274 -101 2028 92 3 3 chr20 12566078 12566373 -59587509 + THE1C-int LTR MaLR 1285 1579 -1 1809 141 65 23 chr20 12566374 12566728 -59587154 + THE1C LTR MaLR 1 369 -6 200 271 0 0 chr20 12566936 12566984 -59586898 + CT-rich Low_complexity Low_complexity 1 48 0 740 270 172 3 chr20 12567627 12567946 -59585936 + LTR16C LTR ERVL 88 460 -31 29 0 0 0 chr20 12568319 12568348 -59585534 + AT_rich Low_complexity Low_complexity 1 29 0 1914 149 4 7 chr20 12569820 12570101 -59583781 + AluSx SINE Alu 8 287 -25 2422 231 33 36 chr20 12570141 12570875 -59583007 + L1ME2 LINE L1 5444 6334 0 207 0 0 0 chr20 12571065 12571088 -59582794 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 582 272 42 9 chr20 12571098 12571315 -59582567 - L1M4 LINE L1 -6318 224 1 909 264 66 59 chr20 12572311 12572750 -59581132 + L1M4 LINE L1 325 766 -5776 414 0 0 0 chr20 12572751 12572797 -59581085 + (TG)n Simple_repeat Simple_repeat 2 47 0 439 200 61 0 chr20 12572799 12572914 -59580968 + L1M4 LINE L1 823 944 -5598 * 3844 183 27 18 chr20 12572908 12573066 -59580816 + L1MB3 LINE L1 5318 5473 -710 379 47 0 31 chr20 12573066 12573130 -59580752 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 3844 183 27 18 chr20 12573130 12573827 -59580055 + L1MB3 LINE L1 5473 6181 -2 854 216 38 19 chr20 12573822 12574086 -59579796 + L1M4 LINE L1 926 1194 -5348 * 1708 128 28 28 chr20 12574088 12574409 -59579473 + L1MA3 LINE L1 5977 6297 -8 22 0 0 0 chr20 12574414 12574436 -59579446 + AT_rich Low_complexity Low_complexity 1 22 0 2460 246 49 39 chr20 12574483 12575882 -59578000 + L1M4 LINE L1 1438 2960 -3684 246 374 52 0 chr20 12576032 12576147 -59577735 - L2 LINE L2 -1 3271 3151 895 231 11 5 chr20 12576150 12576336 -59577546 - MER5A DNA MER1_type 0 189 3 562 239 68 6 chr20 12576350 12576513 -59577369 - MER5B DNA MER1_type -4 174 2 445 315 0 31 chr20 12576513 12576643 -59577239 + MER5B DNA MER1_type 8 133 -45 222 176 106 59 chr20 12576999 12577084 -59576798 + L3b LINE CR1 1296 1384 -199 447 316 23 0 chr20 12578291 12578465 -59575417 - MER5B DNA MER1_type 0 178 1 506 301 28 6 chr20 12579462 12579638 -59574244 - LTR33 LTR ERVL -315 206 27 8640 72 9 1 chr20 12579654 12581575 -59572307 + L1PA7 LINE L1 4204 6143 -11 39 74 0 0 chr20 12581585 12581666 -59572216 + AT_rich Low_complexity Low_complexity 1 81 0 336 271 5 101 chr20 12581764 12581952 -59571930 + MLT1J LTR MaLR 133 302 -209 21 36 0 0 chr20 12582088 12582116 -59571766 + AT_rich Low_complexity Low_complexity 1 28 0 634 164 0 0 chr20 12583739 12583849 -59570033 + 7SLRNA srpRNA srpRNA 210 319 -1 855 299 49 51 chr20 12584858 12585347 -59568535 - LTR16C LTR ERVL -2 489 2 467 317 98 19 chr20 12585678 12585943 -59567939 + L1ME4a LINE L1 5724 6009 -112 443 280 102 52 chr20 12585971 12586410 -59567472 - MLT1K LTR MaLR -17 571 111 215 296 14 0 chr20 12586481 12586552 -59567330 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 325 294 108 0 chr20 12586609 12586711 -59567171 - L2 LINE L2 0 3313 3201 1742 331 73 30 chr20 12586713 12587288 -59566594 - L2 LINE L2 -29 3284 2735 2022 146 0 19 chr20 12587288 12587603 -59566279 + AluSx SINE Alu 1 309 -3 1742 331 73 30 chr20 12587603 12587942 -59565940 - L2 LINE L2 -578 2735 2412 4238 209 60 14 chr20 12587942 12588935 -59564947 - MER45B DNA AcHobo -1 1039 1 1742 331 73 30 chr20 12588935 12589516 -59564366 - L2 LINE L2 -901 2412 1713 2080 122 17 3 chr20 12590215 12590510 -59563372 + AluSx SINE Alu 1 299 -13 1373 269 42 12 chr20 12590599 12591000 -59562882 - LTR16C LTR ERVL -13 478 66 273 255 11 53 chr20 12591144 12591238 -59562644 - MIR3 SINE MIR -37 171 82 2445 61 0 29 chr20 12593242 12593554 -59560328 + AluY SINE Alu 1 303 -8 262 211 0 89 chr20 12595162 12595252 -59558630 + MLT1H LTR MaLR 7 88 -461 259 236 9 104 chr20 12595524 12595630 -59558252 + MLT1J LTR MaLR 454 549 0 2189 161 30 39 chr20 12595892 12596351 -59557531 - MER74A LTR ERVL -103 455 1 534 327 147 31 chr20 12596717 12597244 -59556638 - L2 LINE L2 -9 3263 2678 353 242 66 11 chr20 12597246 12597337 -59556545 + L2 LINE L2 3152 3247 -25 232 243 29 14 chr20 12597386 12597456 -59556426 + MLT1J LTR MaLR 111 181 -330 575 197 8 34 chr20 12597716 12597833 -59556049 + MER81 DNA DNA 1 114 0 794 265 5 28 chr20 12597998 12598213 -59555669 - MER63A DNA MER1_type 0 210 1 1377 235 22 35 chr20 12598268 12598673 -59555209 + LTR16A1 LTR ERVL 5 404 -53 2279 153 23 48 chr20 12598685 12598800 -59555082 + L1MB3 LINE L1 5711 5827 -356 2175 139 0 3 chr20 12598800 12599109 -59554773 + AluSx SINE Alu 1 308 -4 2279 153 23 48 chr20 12599109 12599476 -59554406 + L1MB3 LINE L1 5827 6181 -2 276 200 67 0 chr20 12599529 12599589 -59554293 + LTR16A1 LTR ERVL 394 457 0 399 56 0 0 chr20 12600548 12600602 -59553280 + (CA)n Simple_repeat Simple_repeat 2 55 0 2190 119 0 0 chr20 12600788 12601083 -59552799 - AluSg SINE Alu -15 295 1 185 357 56 56 chr20 12601564 12601760 -59552122 + L2 LINE L2 2841 3036 -277 194 387 95 41 chr20 12601901 12602144 -59551738 + L2 LINE L2 3017 3272 0 25 0 0 0 chr20 12603265 12603290 -59550592 + AT_rich Low_complexity Low_complexity 1 25 0 188 348 14 0 chr20 12603976 12604045 -59549837 + MIR3 SINE MIR 134 203 -5 1491 181 32 74 chr20 12604501 12604905 -59548977 + MLT1B LTR MaLR 1 387 -3 347 254 146 0 chr20 12605301 12605411 -59548471 - L2 LINE L2 0 3313 3188 2107 139 0 72 chr20 12605474 12605705 -59548177 - MLT1A1 LTR MaLR 0 365 172 1965 166 3 10 chr20 12605705 12606013 -59547869 - AluJb SINE Alu -6 306 1 2107 139 0 72 chr20 12606013 12606170 -59547712 - MLT1A1 LTR MaLR -193 172 5 21 36 0 0 chr20 12606468 12606496 -59547386 + AT_rich Low_complexity Low_complexity 1 28 0 1698 203 85 34 chr20 12606571 12606912 -59546970 - MLT1D LTR MaLR -9 496 123 2997 51 8 0 chr20 12606912 12607287 -59546595 - L1PA10 LINE L1 -5 6163 5786 1698 203 85 34 chr20 12607287 12607417 -59546465 - MLT1D LTR MaLR -382 123 1 2685 117 32 15 chr20 12607971 12608434 -59545448 - Tigger4(Zombi) DNA MER2_type 0 2731 2261 2435 155 58 7 chr20 12608433 12608865 -59545017 - Tigger4(Zombi) DNA MER2_type -2277 454 1 * 672 231 24 18 chr20 12608975 12609144 -59544738 + MER5B DNA MER1_type 1 170 -8 1519 186 51 7 chr20 12609278 12609436 -59544446 - AluJo SINE Alu -25 287 110 261 83 0 0 chr20 12609436 12609472 -59544410 + (TG)n Simple_repeat Simple_repeat 1 36 0 1519 186 51 7 chr20 12609472 12609588 -59544294 - AluJo SINE Alu -202 110 1 186 150 0 0 chr20 12609720 12609760 -59544122 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 1501 182 13 64 chr20 12609982 12610295 -59543587 - AluJo SINE Alu -15 297 1 482 245 159 6 chr20 12610494 12610657 -59543225 - MER5A DNA MER1_type 0 189 2 25556 27 16 1 chr20 12611196 12617222 -59536660 - L1PA2 LINE L1 -2 6153 1 1889 77 8 4 chr20 12617314 12617575 -59536307 - L1PA13 LINE L1 -6 6157 5896 209 200 0 60 chr20 12617658 12617708 -59536174 - MIR SINE MIR -2 260 214 1006 153 68 0 chr20 12619646 12619822 -59534060 + MER5A DNA MER1_type 1 188 -1 898 104 0 104 chr20 12619933 12620065 -59533817 + L1MB5 LINE L1 6012 6121 -53 2150 149 0 0 chr20 12620065 12620373 -59533509 + AluSx SINE Alu 1 308 -4 898 104 0 104 chr20 12620373 12620422 -59533460 + L1MB5 LINE L1 6121 6174 0 21 36 0 0 chr20 12620894 12620922 -59532960 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr20 12621032 12621063 -59532819 + AT_rich Low_complexity Low_complexity 1 31 0 395 287 128 39 chr20 12621170 12621505 -59532377 - L1ME4a LINE L1 -11 6110 5746 186 43 0 0 chr20 12621700 12621723 -59532159 + (T)n Simple_repeat Simple_repeat 1 23 0 2285 167 9 23 chr20 12621754 12622191 -59531691 - L1PB4 LINE L1 -13 6143 5713 309 253 0 13 chr20 12622451 12622526 -59531356 + MIR SINE MIR 93 166 -96 308 326 93 17 chr20 12622678 12622914 -59530968 - L1 LINE L1 -2385 3761 3508 200 355 19 56 chr20 12622986 12623093 -59530789 - L2 LINE L2 -617 2697 2595 830 281 102 55 chr20 12623107 12623699 -59530183 + L2 LINE L2 2389 3001 -312 198 280 0 0 chr20 12623850 12623900 -59529982 + L2 LINE L2 3223 3272 0 737 109 5 9 chr20 12623986 12624114 -59529768 + L1MA8 LINE L1 6161 6277 -14 265 193 50 107 chr20 12624144 12624284 -59529598 + L1ME3 LINE L1 6031 6162 0 621 75 0 0 chr20 12625276 12625356 -59528526 + MADE1 DNA Mariner 1 80 0 691 205 0 54 chr20 12625743 12625909 -59527973 - FRAM SINE Alu -20 156 1 3171 179 14 16 chr20 12625995 12626249 -59527633 - L1MB7 LINE L1 -30 6154 5901 519 113 0 0 chr20 12626249 12626329 -59527553 - MADE1 DNA Mariner 0 80 1 3171 179 14 16 chr20 12626329 12626700 -59527182 - L1MB7 LINE L1 -283 5901 5530 1314 193 33 0 chr20 12626702 12627007 -59526875 - L1MB7 LINE L1 -885 5261 4947 28 61 0 0 chr20 12627170 12627219 -59526663 + AT_rich Low_complexity Low_complexity 1 49 0 994 193 0 0 chr20 12627890 12628061 -59525821 + AluJb SINE Alu 133 303 -9 232 345 160 24 chr20 12628114 12628320 -59525562 + L2 LINE L2 3038 3271 -1 283 128 64 0 chr20 12628883 12628930 -59524952 - tRNA-Cys-TGC tRNA tRNA -25 50 1 21 36 0 0 chr20 12629206 12629234 -59524648 + AT_rich Low_complexity Low_complexity 1 28 0 366 316 65 53 chr20 12629872 12630322 -59523560 + L1MC/D LINE L1 5056 5505 -657 324 250 50 96 chr20 12630350 12630570 -59523312 + L1MC/D LINE L1 5603 5812 -309 24 32 0 0 chr20 12630581 12630612 -59523270 + AT_rich Low_complexity Low_complexity 1 31 0 387 0 0 0 chr20 12630679 12630722 -59523160 + (TG)n Simple_repeat Simple_repeat 2 44 0 832 214 71 5 chr20 12630744 12630940 -59522942 - MER3 DNA MER1_type 0 209 1 311 215 131 9 chr20 12630940 12631047 -59522835 + HAL1b LINE L1 1212 1331 -17 408 192 0 0 chr20 12631085 12631163 -59522719 - L1ME4a LINE L1 -81 6040 5963 193 294 0 0 chr20 12631975 12632026 -59521856 + L2 LINE L2 2325 2375 -939 1614 118 80 42 chr20 12632292 12632581 -59521301 + AluSx SINE Alu 3 302 -10 225 140 20 40 chr20 12632767 12632817 -59521065 + CT-rich Low_complexity Low_complexity 1 49 0 455 312 49 76 chr20 12632857 12633012 -59520870 - MLT1K LTR MaLR -239 349 200 2142 126 0 0 chr20 12633012 12633321 -59520561 - AluSx SINE Alu 0 311 3 455 312 49 76 chr20 12633321 12633426 -59520456 - MLT1K LTR MaLR -388 200 94 22 94 0 0 chr20 12634228 12634292 -59519590 + AT_rich Low_complexity Low_complexity 1 64 0 444 294 58 34 chr20 12634402 12634814 -59519068 + L1M4 LINE L1 4877 5298 -848 1851 111 0 32 chr20 12636871 12637186 -59516696 + L1MA5A LINE L1 5990 6294 -3 1132 233 34 48 chr20 12638424 12638776 -59515106 - MLT1A1 LTR MaLR 0 365 19 2253 115 0 6 chr20 12639201 12639513 -59514369 - AluSg SINE Alu 0 310 1 470 309 89 44 chr20 12639789 12640275 -59513607 + LTR33 LTR ERVL 32 522 -1 8971 43 3 0 chr20 12640279 12642162 -59511720 - L1PA5 LINE L1 -6 6148 4272 6104 45 3 5 chr20 12642163 12642924 -59510958 + L1PA5 LINE L1 3512 4270 -1876 195 396 7 22 chr20 12643085 12643224 -59510658 + L3 LINE CR1 646 782 -795 222 299 189 8 chr20 12643307 12643434 -59510448 + L3 LINE CR1 945 1094 -483 189 258 136 68 chr20 12643463 12643595 -59510287 + MIR SINE MIR 4 144 -118 639 314 113 23 chr20 12643691 12644035 -59509847 + L3 LINE CR1 1136 1510 -67 264 286 0 0 chr20 12645131 12645194 -59508688 + MIR3 SINE MIR 144 206 -2 197 227 0 0 chr20 12645447 12645491 -59508391 - MIR SINE MIR -101 161 118 557 301 34 53 chr20 12645721 12646076 -59507806 + LTR16C LTR ERVL 142 489 -2 2180 118 0 7 chr20 12647579 12647883 -59505999 - AluSx SINE Alu -10 302 1 219 182 23 0 chr20 12647929 12647973 -59505909 + CT-rich Low_complexity Low_complexity 4 48 0 294 252 7 14 chr20 12648006 12648145 -59505737 + CT-rich Low_complexity Low_complexity 3 140 0 210 329 52 118 chr20 12648709 12649056 -59504826 - L2 LINE L2 -14 3258 2935 428 294 89 20 chr20 12649572 12649718 -59504164 + MIR SINE MIR 30 185 -77 757 287 181 15 chr20 12649718 12650044 -59503838 - L2 LINE L2 -5 3308 3037 1861 178 31 31 chr20 12650044 12650432 -59503450 + MLT1B LTR MaLR 1 388 -2 757 287 181 15 chr20 12650432 12650863 -59503019 - L2 LINE L2 -276 3037 2418 696 278 126 25 chr20 12650886 12651203 -59502679 + L2 LINE L2 2957 3305 -8 198 103 0 0 chr20 12651209 12651238 -59502644 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2147 105 17 0 chr20 12651284 12651578 -59502304 + AluSp SINE Alu 1 299 -14 1793 56 0 0 chr20 12651666 12651881 -59502001 - AluY SINE Alu -4 307 93 23 33 0 0 chr20 12652789 12652819 -59501063 + AT_rich Low_complexity Low_complexity 1 30 0 1805 163 26 23 chr20 12652881 12653225 -59500657 - MLT1A1 LTR MaLR -4 361 17 21 0 0 0 chr20 12653818 12653839 -59500043 + AT_rich Low_complexity Low_complexity 1 21 0 327 49 0 0 chr20 12653948 12653989 -59499893 + (CA)n Simple_repeat Simple_repeat 1 41 0 1478 214 69 6 chr20 12654134 12654567 -59499315 - MER89 LTR ERV1 0 559 1 343 232 116 98 chr20 12756960 12757184 -59396698 - MLT1H LTR MaLR -5 544 317 398 176 220 0 chr20 12757207 12757298 -59396584 - MLT1H LTR MaLR -30 519 409 2255 247 86 9 chr20 12757298 12757845 -59396037 - MLT1E LTR MaLR 0 593 5 545 337 66 0 chr20 12758647 12758813 -59395069 + MER5B DNA MER1_type 1 177 -1 301 331 25 8 chr20 12758985 12759106 -59394776 - MIR3 SINE MIR -41 167 45 1043 189 26 9 chr20 12759393 12759621 -59394261 - L1MC3 LINE L1 0 7785 7554 2936 146 4 4 chr20 12759635 12760087 -59393795 - L1PA16 LINE L1 -9 6157 5706 2642 193 45 7 chr20 12760394 12760932 -59392950 + MER74A LTR ERVL 1 558 0 397 262 0 0 chr20 12760933 12761017 -59392865 - MER5A DNA MER1_type -104 85 2 306 241 0 0 chr20 12761362 12761443 -59392439 + MIR SINE MIR 79 139 -69 1754 181 66 14 chr20 12761443 12761789 -59392093 - MLT1A1 LTR MaLR 0 365 1 334 223 58 48 chr20 12761789 12761892 -59391990 + MIR SINE MIR 159 262 0 308 235 37 0 chr20 12762848 12762929 -59390953 - MER112 DNA MER1_type -62 198 115 231 36 0 0 chr20 12762929 12762957 -59390925 + (TG)n Simple_repeat Simple_repeat 2 29 0 636 219 42 26 chr20 12763074 12763266 -59390616 - MER113 DNA MER1_type? -76 445 251 421 58 92 0 chr20 12763811 12763931 -59389951 + (TA)n Simple_repeat Simple_repeat 2 132 0 216 250 0 19 chr20 12764939 12764991 -59388891 + C-rich Low_complexity Low_complexity 5 55 0 666 143 0 254 chr20 12765682 12765794 -59388088 + MER5A DNA MER1_type 2 16 -173 2131 121 7 0 chr20 12765794 12766084 -59387798 - AluSx SINE Alu -20 292 1 666 143 0 254 chr20 12766084 12766223 -59387659 + MER5A DNA MER1_type 16 189 0 256 326 82 0 chr20 12767779 12767877 -59386005 - MIR3 SINE MIR -21 187 82 25 31 0 0 chr20 12768235 12768267 -59385615 + AT_rich Low_complexity Low_complexity 1 32 0 379 295 48 19 chr20 12768282 12768550 -59385332 - L1MC5 LINE L1 -68 7893 7618 1853 155 3 7 chr20 12769559 12769856 -59384026 - AluJb SINE Alu -16 296 1 255 224 32 80 chr20 12770319 12770444 -59383438 + MER5A DNA MER1_type 8 126 -63 * 844 219 11 11 chr20 12770336 12770519 -59383363 - MER5A DNA MER1_type -6 183 1 231 322 99 16 chr20 12771821 12771942 -59381940 - MIR3 SINE MIR -3 205 75 816 200 32 16 chr20 12772779 12772964 -59380918 + MER5A DNA MER1_type 1 188 -1 334 352 16 0 chr20 12773362 12773487 -59380395 + MIR SINE MIR 31 157 -105 1708 258 117 23 chr20 12773707 12773922 -59379960 - L1ME3A LINE L1 -13 6157 5964 234 0 0 0 chr20 12773922 12773948 -59379934 + (TG)n Simple_repeat Simple_repeat 1 26 0 1708 258 117 23 chr20 12773948 12774630 -59379252 - L1ME3A LINE L1 -206 5964 5177 625 220 21 5 chr20 12774641 12774827 -59379055 - MER53 DNA DNA 0 189 1 243 88 0 0 chr20 12774839 12774873 -59379009 + (T)n Simple_repeat Simple_repeat 1 34 0 211 226 45 34 chr20 12775486 12775663 -59378219 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 262 331 0 0 chr20 12775536 12775705 -59378177 + (ATG)n Simple_repeat Simple_repeat 1 169 0 808 219 19 0 chr20 12776205 12776360 -59377522 + MER5A DNA MER1_type 10 167 -22 207 261 0 0 chr20 12776394 12776440 -59377442 - MER5A DNA MER1_type -1 188 143 279 0 0 0 chr20 12776665 12776696 -59377186 + (CA)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr20 12777126 12777152 -59376730 + (ATG)n Simple_repeat Simple_repeat 2 27 0 529 312 50 23 chr20 12777161 12777379 -59376503 - MIR SINE MIR -18 244 21 638 291 153 35 chr20 12777506 12777997 -59375885 + MLT1H LTR MaLR 1 549 0 384 185 22 43 chr20 12780237 12780329 -59373553 + MIR SINE MIR 100 189 -73 297 286 34 75 chr20 12780503 12780650 -59373232 + L2 LINE L2 2911 3051 -221 238 313 173 7 chr20 12780911 12781061 -59372821 - MIR3 SINE MIR -4 204 30 563 308 60 95 chr20 12781137 12781718 -59372164 + MLT1K LTR MaLR 28 588 0 653 304 17 0 chr20 12782098 12782279 -59371603 - MIR SINE MIR -11 251 68 249 302 105 12 chr20 12782285 12782371 -59371511 - MIR SINE MIR -152 110 17 753 221 7 7 chr20 12782406 12782546 -59371336 + MER5A DNA MER1_type 16 155 -34 1245 260 0 54 chr20 12782546 12782950 -59370932 + MER1B DNA MER1_type 1 339 0 559 243 46 35 chr20 12783336 12783447 -59370435 + MER5B DNA MER1_type 4 120 -58 2178 104 0 0 chr20 12783447 12783759 -59370123 - AluSc SINE Alu 0 312 1 559 243 46 35 chr20 12783759 12783819 -59370063 + MER5B DNA MER1_type 120 178 0 1506 234 123 5 chr20 12784468 12784917 -59368965 + MLT1H LTR MaLR 40 541 -8 24 53 0 0 chr20 12784941 12784979 -59368903 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr20 12785779 12785802 -59368080 + AT_rich Low_complexity Low_complexity 1 23 0 308 345 86 7 chr20 12786075 12786214 -59367668 + MIR3 SINE MIR 34 183 -25 736 255 123 23 chr20 12787230 12787579 -59366303 - L1ME3A LINE L1 -6 6164 5781 594 219 152 6 chr20 12789585 12789749 -59364133 + MER5A DNA MER1_type 1 188 -1 207 191 24 0 chr20 12789820 12789862 -59364020 + CT-rich Low_complexity Low_complexity 3 45 0 1430 209 71 145 chr20 12790531 12790653 -59363229 - L1ME2 LINE L1 -9 6155 6025 810 197 7 7 chr20 12790653 12790800 -59363082 - FRAM SINE Alu -16 150 4 1430 209 71 145 chr20 12790800 12791036 -59362846 - L1ME2 LINE L1 -139 6025 5773 648 162 0 52 chr20 12791036 12791172 -59362710 - L1PA13 LINE L1 -1 6162 6034 1430 209 71 145 chr20 12791172 12791591 -59362291 - L1ME2 LINE L1 -391 5773 5435 397 106 15 0 chr20 12791885 12791951 -59361931 - MLT1D LTR MaLR 0 505 439 2528 113 8 0 chr20 12791988 12792358 -59361524 - L1PA13 LINE L1 0 6163 5791 1340 234 69 28 chr20 12792358 12792793 -59361089 - MLT1D LTR MaLR -52 453 1 414 234 60 98 chr20 12793063 12793278 -59360604 + MLT1H LTR MaLR 60 265 -144 234 222 0 111 chr20 12793354 12793462 -59360420 + MLT1I LTR MaLR 316 409 0 2359 75 14 0 chr20 12795732 12796026 -59357856 - AluSp SINE Alu -13 300 3 418 213 110 0 chr20 12796307 12796443 -59357439 + LTR33A LTR ERVL 373 523 0 298 405 15 8 chr20 12796474 12796605 -59357277 - MIR SINE MIR -129 133 2 1074 249 100 57 chr20 12796927 12797515 -59356367 + MLT1F LTR MaLR 2 538 -4 255 316 46 52 chr20 12797641 12797815 -59356067 - LTR33 LTR ERVL -237 284 112 241 250 0 0 chr20 12799152 12799204 -59354678 + L2 LINE L2 3261 3312 -1 338 294 62 12 chr20 12799762 12799922 -59353960 - MIR SINE MIR -13 249 82 309 341 102 63 chr20 12800780 12801527 -59352355 + L2 LINE L2 2256 3072 -200 209 278 0 0 chr20 12801527 12801581 -59352301 + L2 LINE L2 3210 3263 -9 2730 177 16 57 chr20 12801637 12802270 -59351612 + LTR9 LTR ERV1 1 607 -5 23 33 0 0 chr20 12803342 12803372 -59350510 + AT_rich Low_complexity Low_complexity 1 30 0 307 235 0 12 chr20 12804739 12804820 -59349062 - L1ME3A LINE L1 -10 6160 6081 372 274 12 30 chr20 12805586 12805750 -59348132 + A-rich Low_complexity Low_complexity 1 161 0 6251 201 21 18 chr20 12805753 12805923 -59347959 + L1PB4 LINE L1 3690 3858 -2288 2484 33 0 13 chr20 12805923 12806222 -59347660 + AluSg SINE Alu 1 295 -15 6251 201 21 18 chr20 12806222 12807540 -59346342 + L1PB4 LINE L1 3858 5182 -964 22 35 0 0 chr20 12807540 12807569 -59346313 + AT_rich Low_complexity Low_complexity 1 29 0 349 91 97 6 chr20 12807569 12807734 -59346148 + (TA)n Simple_repeat Simple_repeat 1 180 0 390 230 93 14 chr20 12807738 12807877 -59346005 + L1PB4 LINE L1 5191 5340 -806 637 314 67 21 chr20 12808474 12808850 -59345032 - LTR16C LTR ERVL 0 491 99 555 233 259 11 chr20 12809133 12809322 -59344560 - MIR SINE MIR -12 250 15 1180 280 87 3 chr20 12809408 12809765 -59344117 + MLT1F LTR MaLR 1 387 -155 2302 218 74 40 chr20 12809765 12810650 -59343232 + L1ME2 LINE L1 4463 5375 -787 1279 221 13 93 chr20 12810650 12811048 -59342834 + MLT1A2 LTR MaLR 1 366 -8 1149 247 3 18 chr20 12811054 12811382 -59342500 + L1ME2 LINE L1 5369 5691 -473 * 1667 180 21 0 chr20 12811378 12811706 -59342176 + L1PB4 LINE L1 5784 6118 -38 2244 102 0 19 chr20 12811711 12812026 -59341856 + AluSc SINE Alu 1 309 0 1054 251 111 26 chr20 12812100 12812523 -59341359 + L1ME2 LINE L1 5698 6156 -8 2127 92 0 76 chr20 12813099 12813427 -59340455 - AluSq SINE Alu -10 303 1 279 235 0 0 chr20 12813596 12813647 -59340235 + L2 LINE L2 3212 3262 -51 292 219 0 16 chr20 12813664 12813728 -59340154 - MIR SINE MIR -65 143 81 3116 166 9 5 chr20 12813730 12814292 -59339590 + L1MB3 LINE L1 5618 6181 -2 1893 151 83 6 chr20 12814328 12814665 -59339217 + MLT1A1 LTR MaLR 1 363 -2 770 172 41 53 chr20 12814894 12815063 -59338819 - MER5B DNA MER1_type -1 177 11 373 315 125 16 chr20 12815261 12815445 -59338437 + MIR SINE MIR 7 210 -52 312 27 0 0 chr20 12815662 12815699 -59338183 + (TG)n Simple_repeat Simple_repeat 1 37 0 483 159 30 76 chr20 12817394 12817526 -59336356 - L1MA9 LINE L1 -104 6208 6083 458 184 29 0 chr20 12817531 12817634 -59336248 + L1MB1 LINE L1 5765 5870 -319 343 201 49 49 chr20 12817665 12817809 -59336073 - L1MC5 LINE L1 -284 7677 7534 233 370 31 24 chr20 12817898 12818025 -59335857 + L2 LINE L2 3186 3313 0 593 129 0 0 chr20 12820150 12820235 -59333647 + L1PB4 LINE L1 6059 6143 -13 191 391 0 22 chr20 12820437 12820527 -59333355 + MIR3 SINE MIR 9 96 -112 269 209 275 0 chr20 12820527 12820618 -59333264 - MER5A DNA MER1_type 0 189 74 239 298 182 0 chr20 12820663 12820784 -59333098 + MIR SINE MIR 88 230 -32 264 303 22 11 chr20 12820825 12820914 -59332968 - MIR3 SINE MIR 0 208 119 26 0 0 0 chr20 12821109 12821135 -59332747 + AT_rich Low_complexity Low_complexity 1 26 0 658 263 13 0 chr20 12822357 12822513 -59331369 + MLT1H LTR MaLR 101 258 -291 223 114 45 0 chr20 12822807 12822851 -59331031 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 243 216 0 0 chr20 12822866 12822917 -59330965 + MLT1H LTR MaLR 485 535 -14 282 301 181 14 chr20 12823290 12823463 -59330419 - MIR SINE MIR -46 216 20 294 95 0 0 chr20 12823494 12823536 -59330346 + (GAA)n Simple_repeat Simple_repeat 2 43 0 182 260 0 20 chr20 12823633 12823683 -59330199 - L2 LINE L2 -10 3262 3214 429 344 71 34 chr20 12823903 12824284 -59329598 + LTR16C LTR ERVL 97 491 0 20140 106 13 12 chr20 12826140 12829958 -59323924 + L1PA7 LINE L1 2325 6154 0 1943 191 19 12 chr20 12830412 12830830 -59323052 - MER61C LTR ERV1 0 434 14 432 285 177 0 chr20 12832638 12832768 -59321114 + MER5A DNA MER1_type 31 183 -6 2016 222 89 55 chr20 12833018 12833649 -59320233 - MLT1E1 LTR MaLR 0 654 3 231 250 15 15 chr20 12833650 12833718 -59320164 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 761 252 61 35 chr20 12833758 12834214 -59319668 + MER113 DNA MER1_type? 2 469 -52 401 247 128 13 chr20 12834841 12835185 -59318697 + LTR33 LTR ERVL 112 510 -11 329 271 78 0 chr20 12836210 12836331 -59317551 - MER113 DNA MER1_type? -43 478 348 255 341 28 28 chr20 12836331 12836510 -59317372 + HsTC2 DNA Tc2 1 179 -1719 * 560 225 6 17 chr20 12836509 12836682 -59317200 + HsTC2 DNA Tc2 1723 1893 -5 345 269 58 19 chr20 12836832 12836936 -59316946 + MIR SINE MIR 85 192 -70 35 41 0 0 chr20 12837166 12837215 -59316667 + AT_rich Low_complexity Low_complexity 1 49 0 638 267 58 33 chr20 12838640 12838880 -59315002 + LTR16A1 LTR ERVL 147 392 -65 183 129 0 0 chr20 12838893 12838924 -59314958 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1286 145 9 22 chr20 12838934 12839161 -59314721 - L1PA16 LINE L1 -9 6157 5934 200 328 30 15 chr20 12839494 12839561 -59314321 - MIR SINE MIR -175 87 20 614 260 133 5 chr20 12840847 12841043 -59312839 + MIR SINE MIR 41 261 -1 352 326 145 31 chr20 12841316 12841543 -59312339 + MIR SINE MIR 7 259 -3 450 302 69 11 chr20 12842496 12842685 -59311197 - MIR SINE MIR 0 262 63 418 270 0 0 chr20 12842706 12842806 -59311076 + MER94 DNA DNA 1 100 -34 183 205 0 0 chr20 12842851 12842890 -59310992 + CT-rich Low_complexity Low_complexity 2 40 0 420 20 0 0 chr20 12843067 12843116 -59310766 + (TTCCC)n Simple_repeat Simple_repeat 5 53 0 898 147 6 11 chr20 12843236 12843413 -59310469 + CT-rich Low_complexity Low_complexity 3 178 0 693 296 49 42 chr20 12844325 12844612 -59309270 - LTR16C LTR ERVL -121 370 82 2262 90 7 3 chr20 12845496 12845796 -59308086 + AluSc SINE Alu 1 301 -8 244 265 0 59 chr20 12846310 12846378 -59307504 - L2 LINE L2 -1 3312 3249 816 320 14 46 chr20 12846812 12847162 -59306720 + MER115 DNA AcHobo 14 352 -341 23 0 0 0 chr20 12847434 12847457 -59306425 + AT_rich Low_complexity Low_complexity 1 23 0 909 247 122 67 chr20 12848082 12848515 -59305367 - LTR16A1 LTR ERVL 0 457 1 413 200 83 50 chr20 12850247 12850437 -59303445 + MLT1H LTR MaLR 319 520 -29 480 352 6 6 chr20 12851244 12851423 -59302459 + MIR3 SINE MIR 7 185 -23 476 168 32 0 chr20 12851541 12851636 -59302246 - MER5A DNA MER1_type -83 106 9 183 80 0 0 chr20 12852207 12852232 -59301650 + (T)n Simple_repeat Simple_repeat 1 25 0 255 279 0 0 chr20 12852508 12852569 -59301313 - Charlie8 DNA MER1_type 0 2417 2357 23 33 0 0 chr20 12852987 12853017 -59300865 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr20 12853062 12853097 -59300785 + AT_rich Low_complexity Low_complexity 1 35 0 2134 65 0 95 chr20 12853814 12854151 -59299731 + AluYa8 SINE Alu 1 305 -5 2452 196 43 24 chr20 12854825 12855451 -59298431 - L1MC4 LINE L1 -148 7894 7257 2631 222 37 14 chr20 12855462 12856170 -59297712 - L1MC4a LINE L1 -6 7802 7079 405 194 10 10 chr20 12856175 12856273 -59297609 - L1MC4a LINE L1 -627 7181 7084 22 0 0 0 chr20 12856698 12856720 -59297162 + AT_rich Low_complexity Low_complexity 1 22 0 1059 255 72 33 chr20 12856745 12857164 -59296718 - MLT1J2 LTR MaLR -13 437 3 403 280 112 105 chr20 12859525 12860107 -59293775 + MLT1K LTR MaLR 3 588 0 520 302 79 5 chr20 12860806 12860995 -59292887 + MIR SINE MIR 54 256 -6 546 300 63 1 chr20 12861558 12861984 -59291898 - LTR33A LTR ERVL -1 522 66 675 207 71 47 chr20 12863790 12863959 -59289923 - MER5A DNA MER1_type 0 189 17 251 302 101 34 chr20 12864406 12864555 -59289327 + MIR SINE MIR 48 206 -56 6843 32 1 1 chr20 12865021 12865872 -59288010 - L1PA4 LINE L1 0 6155 5305 22 70 0 0 chr20 12865919 12865962 -59287920 + AT_rich Low_complexity Low_complexity 1 43 0 1000 217 40 33 chr20 12865990 12866294 -59287588 - L1ME3A LINE L1 -48 6122 5817 3790 155 54 10 chr20 12866475 12867199 -59286683 + L1PB3 LINE L1 5392 6147 -7 304 343 56 36 chr20 12867509 12867812 -59286070 - L1MEc LINE L1 -4726 1584 1276 2000 144 0 3 chr20 12867821 12868112 -59285770 - AluSx SINE Alu -20 292 3 270 275 8 25 chr20 12868159 12868279 -59285603 - L1MEc LINE L1 -4919 1200 1083 4070 166 25 53 chr20 12868290 12868878 -59285004 - L1MB7 LINE L1 -17 6167 5563 221 30 61 0 chr20 12868878 12868911 -59284971 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1928 139 0 11 chr20 12868911 12869198 -59284684 - AluSx SINE Alu -28 284 1 4070 166 25 53 chr20 12869198 12870004 -59283878 - L1MB7 LINE L1 -619 5565 4833 419 278 144 45 chr20 12870497 12870850 -59283032 - MLT1H LTR MaLR -161 388 1 391 243 20 46 chr20 12870915 12871067 -59282815 + L1MC5 LINE L1 7782 7929 -32 2170 110 16 0 chr20 12873444 12873777 -59280105 - AluSq SINE Alu 0 338 1 35 54 0 0 chr20 12874839 12874895 -59278987 + AT_rich Low_complexity Low_complexity 1 56 0 225 0 0 0 chr20 12875000 12875025 -59278857 + (A)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr20 12875039 12875068 -59278814 + AT_rich Low_complexity Low_complexity 1 29 0 1848 140 31 67 chr20 12875077 12875435 -59278447 - MER46B DNA MER2_type -16 220 1 359 139 13 76 chr20 12875435 12875466 -59278416 + MER46A DNA MER2_type 145 170 -66 2119 180 46 59 chr20 12875551 12876007 -59277875 - MSTB2 LTR MaLR -7 450 1 1669 255 62 35 chr20 12876138 12876651 -59277231 - MLT1H LTR MaLR 0 549 23 336 350 106 25 chr20 12876784 12877218 -59276664 - L2 LINE L2 -664 2650 2182 242 304 54 9 chr20 12877425 12877537 -59276345 - MIR SINE MIR -14 248 132 213 337 117 17 chr20 12877743 12877872 -59276010 - MIR SINE MIR -62 146 6 429 299 89 6 chr20 12878570 12878727 -59275155 + MIR SINE MIR 64 233 -29 230 373 11 6 chr20 12878737 12878914 -59274968 + (TGG)n Simple_repeat Simple_repeat 3 180 0 198 143 0 0 chr20 12878968 12879003 -59274879 + (TGG)n Simple_repeat Simple_repeat 2 36 0 342 331 6 17 chr20 12879030 12879202 -59274680 + (TGG)n Simple_repeat Simple_repeat 1 170 0 398 230 0 7 chr20 12879240 12879379 -59274503 + (TGG)n Simple_repeat Simple_repeat 2 139 0 841 258 10 14 chr20 12880982 12881191 -59272691 - MIR SINE MIR -2 260 53 540 256 0 0 chr20 12882406 12882562 -59271320 + GA-rich Low_complexity Low_complexity 4 159 0 190 296 23 0 chr20 12882813 12882857 -59271025 - L3b LINE CR1 -22 1561 1517 252 146 0 0 chr20 12883119 12883160 -59270722 + L2 LINE L2 3262 3302 -11 1192 304 84 14 chr20 12884751 12885267 -59268615 - L2 LINE L2 -6 3307 2744 506 339 9 21 chr20 12885299 12885532 -59268350 - L2 LINE L2 -927 2387 2158 412 311 66 0 chr20 12886369 12886491 -59267391 + L2 LINE L2 3137 3266 -6 892 224 33 0 chr20 12887046 12887229 -59266653 - MER5A DNA MER1_type 0 189 1 468 298 0 8 chr20 12887230 12887351 -59266531 + MER5B DNA MER1_type 3 122 -56 497 238 175 0 chr20 12887500 12887660 -59266222 + MER5A DNA MER1_type 1 188 -1 518 282 77 0 chr20 12887698 12887854 -59266028 - MER5B DNA MER1_type 0 178 11 1222 263 62 7 chr20 12888139 12888447 -59265435 + MLT1H LTR MaLR 1 325 -224 614 260 47 6 chr20 12888578 12888747 -59265135 + MLT1H LTR MaLR 374 549 0 253 369 66 0 chr20 12889506 12889628 -59264254 - MIR SINE MIR -39 223 94 253 267 62 85 chr20 12889643 12889819 -59264063 - MLT1K LTR MaLR -18 570 399 299 299 35 11 chr20 12889928 12890015 -59263867 - MLT1K LTR MaLR -354 234 146 556 244 39 0 chr20 12890054 12890181 -59263701 - FLAM_A SINE Alu -1 132 1 23 68 0 0 chr20 12891386 12891430 -59262452 + AT_rich Low_complexity Low_complexity 1 44 0 261 0 0 0 chr20 12893743 12893772 -59260110 + (CA)n Simple_repeat Simple_repeat 2 30 0 530 293 143 57 chr20 12894102 12894577 -59259305 - LTR33 LTR ERVL -4 517 2 284 296 112 24 chr20 12894699 12894905 -59258977 - L2 LINE L2 -854 2460 2237 304 293 0 52 chr20 12897614 12897730 -59256152 - MIR SINE MIR -75 187 78 1890 137 18 31 chr20 12898358 12898739 -59255143 + L1MA7 LINE L1 5912 6287 -4 320 246 76 42 chr20 12899537 12899655 -59254227 - MIR SINE MIR -66 142 21 274 320 20 33 chr20 12899787 12899940 -59253942 + MARNA DNA Mariner 16 166 -420 644 319 151 12 chr20 12900055 12900400 -59253482 + L2 LINE L2 2921 3313 0 334 248 0 88 chr20 12900457 12900594 -59253288 - 7SK RNA RNA -68 125 1 536 308 46 17 chr20 12900607 12900847 -59253035 + MARNA DNA Mariner 171 417 -169 221 103 26 0 chr20 12902776 12902815 -59251067 - L2 LINE L2 -1 3312 3273 1435 175 22 121 chr20 12902926 12903331 -59250551 + MLT1A1 LTR MaLR 1 365 0 251 289 0 13 chr20 12904667 12904743 -59249139 + MIR3 SINE MIR 104 178 -30 378 42 0 0 chr20 12905799 12905847 -59248035 + (TG)n Simple_repeat Simple_repeat 2 49 0 315 0 0 0 chr20 12906580 12906615 -59247267 + (CA)n Simple_repeat Simple_repeat 2 36 0 252 314 178 18 chr20 12908358 12908527 -59245355 + LTR16C LTR ERVL 296 491 0 186 300 29 0 chr20 12908648 12908718 -59245164 - L2 LINE L2 -13 3259 3188 233 310 10 10 chr20 12909189 12909289 -59244593 - MER103 DNA DNA -12 154 55 537 298 68 34 chr20 12909669 12909874 -59244008 + MIR SINE MIR 28 239 -23 215 295 166 14 chr20 12909908 12910047 -59243835 + MIR SINE MIR 1 160 -102 216 67 0 0 chr20 12911497 12911527 -59242355 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 211 315 47 82 chr20 12913140 12913372 -59240510 + MIR SINE MIR 32 255 -7 36 53 0 0 chr20 12913714 12913771 -59240111 + AT_rich Low_complexity Low_complexity 1 57 0 293 311 88 21 chr20 12914028 12914266 -59239616 - L1M4 LINE L1 -1967 4179 3926 27 81 0 0 chr20 12914280 12914342 -59239540 + AT_rich Low_complexity Low_complexity 1 62 0 698 228 72 8 chr20 12914786 12915023 -59238859 - L1MC4a LINE L1 -1867 5941 5690 323 295 74 0 chr20 12915084 12915179 -59238703 + L1MC/D LINE L1 5540 5641 -2167 339 280 91 55 chr20 12915739 12916014 -59237868 - HAL1 LINE L1 -17 2490 2206 30 93 0 0 chr20 12916014 12916100 -59237782 + AT_rich Low_complexity Low_complexity 1 86 0 217 340 0 0 chr20 12918664 12918714 -59235168 - MIR3 SINE MIR -40 168 119 314 250 29 0 chr20 12919052 12919119 -59234763 + Charlie4 DNA MER1_type 14 82 -1879 1275 164 132 9 chr20 12919119 12919542 -59234340 - LTR54 LTR ERV1 0 510 1 557 199 90 13 chr20 12919713 12919869 -59234013 + Charlie4 DNA MER1_type 1781 1948 -13 1637 194 10 7 chr20 12920107 12920416 -59233466 + AluJo SINE Alu 3 332 0 181 0 0 0 chr20 12920416 12920436 -59233446 + (A)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr20 12922772 12922794 -59231088 + AT_rich Low_complexity Low_complexity 1 22 0 2474 168 9 12 chr20 12922836 12923265 -59230617 - MSTC LTR MaLR 0 428 1 46 54 0 0 chr20 12923494 12923568 -59230314 + AT_rich Low_complexity Low_complexity 1 74 0 1162 188 68 19 chr20 12924358 12924667 -59229215 + MER33 DNA MER1_type 1 324 0 345 196 9 103 chr20 12924760 12924867 -59229015 + MIR SINE MIR 118 214 -48 288 292 44 0 chr20 12926211 12926313 -59227569 - MIR SINE MIR -62 146 60 452 307 108 21 chr20 12927017 12927304 -59226578 - LTR16C LTR ERVL -2 489 178 226 323 32 36 chr20 12927549 12927741 -59226141 - L2 LINE L2 -314 2958 2766 946 298 41 52 chr20 12927779 12928431 -59225451 + Charlie7 DNA MER1_type 79 723 -1889 288 234 11 32 chr20 12928484 12928578 -59225304 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 530 274 102 28 chr20 12928587 12928802 -59225080 - LTR16C LTR ERVL -63 428 198 1403 186 8 8 chr20 12929148 12929401 -59224481 + AluJo SINE Alu 22 274 -38 515 170 0 9 chr20 12929409 12929515 -59224367 + GA-rich Low_complexity Low_complexity 1 105 0 2100 128 14 0 chr20 12929931 12930228 -59223654 + AluSx SINE Alu 3 303 -9 21 36 0 0 chr20 12930261 12930289 -59223593 + AT_rich Low_complexity Low_complexity 1 28 0 405 225 50 0 chr20 12930681 12930761 -59223121 - MER5A DNA MER1_type -84 105 22 448 248 209 0 chr20 12931591 12931720 -59222162 - MER5A DNA MER1_type -2 187 32 2328 157 21 23 chr20 12932338 12932771 -59221111 - MSTB1 LTR MaLR 0 432 1 6806 65 10 0 chr20 12932990 12934337 -59219545 + L1PA7 LINE L1 4787 6151 -3 27 0 0 0 chr20 12935276 12935303 -59218579 + AT_rich Low_complexity Low_complexity 1 27 0 360 265 8 8 chr20 12936283 12936400 -59217482 - L2 LINE L2 -1285 2029 1913 634 264 86 6 chr20 12936444 12936618 -59217264 + MER5A DNA MER1_type 1 188 -1 198 382 13 0 chr20 12937192 12937268 -59216614 - L3 LINE CR1 -613 964 888 195 299 90 0 chr20 12937457 12937524 -59216358 + MER5A DNA MER1_type 117 189 0 207 0 0 0 chr20 12937553 12937576 -59216306 + (TTA)n Simple_repeat Simple_repeat 2 24 0 320 260 123 26 chr20 12940592 12940746 -59213136 - MARNA DNA Mariner -224 362 194 192 107 0 0 chr20 12940806 12940834 -59213048 - L2 LINE L2 -535 2779 2752 569 296 89 37 chr20 12940841 12941378 -59212504 - L2 LINE L2 0 3313 2704 2305 176 38 5 chr20 12941401 12941845 -59212037 - L1PB4 LINE L1 0 6156 5698 767 216 38 0 chr20 12941851 12942036 -59211846 + L1 LINE L1 4873 5064 -1082 606 239 22 0 chr20 12942041 12942179 -59211703 - L2 LINE L2 -599 2715 2575 598 277 110 68 chr20 12942182 12942655 -59211227 - LTR33 LTR ERVL -1 520 28 1663 305 76 29 chr20 12943189 12943980 -59209902 - ERVL LTR ERVL -757 5007 4180 865 283 42 21 chr20 12944025 12944361 -59209521 - ERVL LTR ERVL -2360 3294 2952 491 173 0 0 chr20 12944412 12944493 -59209389 - LTR29 LTR ERV1 -66 556 476 443 292 43 86 chr20 12944782 12945039 -59208843 - ERVL LTR ERVL -3174 2590 2345 1767 136 13 84 chr20 12945051 12945361 -59208521 - AluSx SINE Alu -24 288 1 311 333 61 14 chr20 12945424 12945571 -59208311 - ERVL LTR ERVL -5076 688 535 21 0 0 0 chr20 12945707 12945728 -59208154 + AT_rich Low_complexity Low_complexity 1 21 0 232 295 9 48 chr20 12946024 12946129 -59207753 - LTR33 LTR ERVL -20 501 401 1338 273 95 69 chr20 12946343 12946467 -59207415 - L2 LINE L2 -636 2678 2559 1444 184 106 0 chr20 12946467 12946643 -59207239 - AluJb SINE Alu 0 312 93 423 0 0 0 chr20 12946643 12946690 -59207192 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 1444 184 106 0 chr20 12946690 12946795 -59207087 - AluJb SINE Alu -219 93 1 1338 273 95 69 chr20 12946795 12947341 -59206541 - L2 LINE L2 -755 2559 1990 3127 177 26 25 chr20 12947343 12948070 -59205812 - L1PA16 LINE L1 -1131 5015 4288 3504 146 4 31 chr20 12948071 12948336 -59205546 + L1PA16 LINE L1 5034 5305 -861 2071 122 0 10 chr20 12948336 12948630 -59205252 + AluSx SINE Alu 1 291 -21 3504 146 4 31 chr20 12948630 12949175 -59204707 + L1PA16 LINE L1 5305 5828 -338 1994 137 0 22 chr20 12949186 12949500 -59204382 + AluSx SINE Alu 6 312 0 1286 149 64 4 chr20 12949505 12949740 -59204142 + L1PA16 LINE L1 5909 6157 -9 2190 300 84 13 chr20 12949761 12950582 -59203300 - L2 LINE L2 -1342 1972 1094 23 33 0 0 chr20 12950742 12950772 -59203110 + AT_rich Low_complexity Low_complexity 1 30 0 210 288 122 29 chr20 12951548 12951687 -59202195 - MIR SINE MIR 0 262 111 1434 162 22 0 chr20 12951689 12951950 -59201932 - AluJo SINE Alu 0 315 50 197 241 134 54 chr20 12952032 12952144 -59201738 + L2 LINE L2 3192 3312 -1 22 0 0 0 chr20 12952608 12952630 -59201252 + AT_rich Low_complexity Low_complexity 1 22 0 382 294 103 7 chr20 12954097 12954233 -59199649 + MIR3 SINE MIR 12 160 -48 1885 143 7 0 chr20 12954317 12954621 -59199261 + AluSx SINE Alu 1 306 0 22 0 0 0 chr20 12954624 12954646 -59199236 + AT_rich Low_complexity Low_complexity 1 22 0 1074 277 85 18 chr20 12954722 12955230 -59198652 - MLT1H LTR MaLR 0 549 1 183 114 0 0 chr20 12956258 12956293 -59197589 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 456 247 0 0 chr20 12956739 12956824 -59197058 + MER5A DNA MER1_type 105 189 0 2208 97 10 0 chr20 12956906 12957196 -59196686 + AluSg SINE Alu 1 293 -17 189 350 90 10 chr20 12957612 12957712 -59196170 - MIR SINE MIR -126 136 29 204 261 0 0 chr20 12957795 12957841 -59196041 + L2 LINE L2 3261 3306 -7 1420 205 3 50 chr20 12958007 12958329 -59195553 + AluJo SINE Alu 1 307 -5 1082 224 23 0 chr20 12958341 12958605 -59195277 + L1MA4 LINE L1 6019 6288 -12 300 395 35 35 chr20 12959064 12959403 -59194479 + L2 LINE L2 2327 2665 -649 274 380 47 16 chr20 12959861 12959990 -59193892 + L2 LINE L2 3140 3272 0 331 261 6 48 chr20 12960206 12960371 -59193511 - HAL1 LINE L1 -106 2401 2244 1549 126 0 0 chr20 12960625 12960839 -59193043 - AluSg/x SINE Alu -13 297 84 7617 27 0 0 chr20 12960845 12962069 -59191813 - L1PA4 LINE L1 0 6155 4932 249 369 13 40 chr20 12963922 12964071 -59189811 + MIR3 SINE MIR 38 182 -26 268 279 0 0 chr20 12965156 12965224 -59188658 - L2 LINE L2 -4 3268 3201 1156 274 115 22 chr20 12965743 12965916 -59187966 - L1MEd LINE L1 -2690 3439 3284 252 0 0 0 chr20 12965916 12965944 -59187938 + (TC)n Simple_repeat Simple_repeat 1 28 0 1156 274 115 22 chr20 12965944 12965982 -59187900 - L1MEd LINE L1 -2845 3284 3251 1549 129 0 0 chr20 12965982 12966199 -59187683 - AluSg/x SINE Alu -21 289 73 1156 274 115 22 chr20 12966199 12966706 -59187176 - L1MEd LINE L1 -2878 3251 2653 203 0 37 0 chr20 12966897 12966924 -59186958 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 626 205 0 0 chr20 12966928 12967040 -59186842 - FRAM SINE Alu -46 130 19 249 293 57 53 chr20 12967181 12967464 -59186418 - L1MEd LINE L1 -4910 1209 926 24 53 0 0 chr20 12968108 12968146 -59185736 + AT_rich Low_complexity Low_complexity 1 38 0 542 346 91 0 chr20 12968321 12968564 -59185318 + L2 LINE L2 2388 2652 -662 26 64 0 0 chr20 12968773 12968820 -59185062 + AT_rich Low_complexity Low_complexity 1 47 0 261 314 58 48 chr20 12969254 12969563 -59184319 - L2 LINE L2 -611 2703 2392 652 343 73 50 chr20 12970901 12971774 -59182108 + L2 LINE L2 2132 3042 -230 1835 173 3 3 chr20 12971774 12971795 -59182087 - AluSx SINE Alu -5 307 287 367 23 0 0 chr20 12971795 12971838 -59182044 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1835 173 3 3 chr20 12971838 12972123 -59181759 - AluSx SINE Alu -24 288 1 652 343 73 50 chr20 12972123 12972355 -59181527 + L2 LINE L2 3042 3267 -5 301 292 58 25 chr20 12972504 12972624 -59181258 - MIR3 SINE MIR -38 170 47 28 0 0 0 chr20 12972641 12972669 -59181213 + AT_rich Low_complexity Low_complexity 1 28 0 2090 113 3 7 chr20 12974012 12974294 -59179588 + AluSq SINE Alu 1 281 -32 960 53 0 0 chr20 12974294 12974425 -59179457 + (GAA)n Simple_repeat Simple_repeat 2 132 0 758 309 33 52 chr20 12974439 12974537 -59179345 - MLT1K LTR MaLR -87 501 403 2035 117 7 3 chr20 12974537 12974723 -59179159 - AluSx SINE Alu 0 312 122 222 37 0 0 chr20 12974723 12974750 -59179132 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2035 117 7 3 chr20 12974750 12974873 -59179009 - AluSx SINE Alu -190 122 1 758 309 33 52 chr20 12974873 12975140 -59178742 - MLT1K LTR MaLR -185 403 143 180 329 63 0 chr20 12977128 12977207 -59176675 - MIR SINE MIR -109 153 70 1809 170 0 3 chr20 12977408 12977702 -59176180 + AluSx SINE Alu 15 307 -5 194 203 0 34 chr20 12979253 12979312 -59174570 + GA-rich Low_complexity Low_complexity 4 60 0 544 292 65 6 chr20 12980318 12980486 -59173396 + MIR SINE MIR 13 190 -72 301 245 21 115 chr20 12980837 12981029 -59172853 + L2 LINE L2 3013 3186 -127 736 283 177 24 chr20 12981370 12981823 -59172059 - MLT1H LTR MaLR -21 528 7 237 65 0 0 chr20 12983286 12983350 -59170532 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr20 12983350 12983381 -59170501 + (TG)n Simple_repeat Simple_repeat 1 31 0 203 330 34 72 chr20 12984156 12984335 -59169547 - MIR3 SINE MIR -63 145 10 488 252 44 7 chr20 12984813 12984948 -59168934 + MIR SINE MIR 73 212 -50 208 186 70 0 chr20 12985064 12985107 -59168775 - MIR SINE MIR -6 256 211 216 0 0 0 chr20 12985774 12985798 -59168084 + (TG)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr20 12985902 12985928 -59167954 + AT_rich Low_complexity Low_complexity 1 26 0 180 111 0 0 chr20 12986452 12986479 -59167403 + (T)n Simple_repeat Simple_repeat 1 27 0 1249 237 50 0 chr20 12986753 12987070 -59166812 - MER58B DNA MER1_type -8 333 1 393 317 154 35 chr20 12987071 12987383 -59166499 + L2 LINE L2 2216 2564 -750 423 0 0 0 chr20 12987448 12987495 -59166387 + (TG)n Simple_repeat Simple_repeat 1 47 0 1882 139 15 0 chr20 12987497 12987771 -59166111 - AluSq SINE Alu -35 278 1 521 308 70 78 chr20 12987879 12988507 -59165375 + L2 LINE L2 2643 3268 -4 322 334 40 74 chr20 12989369 12989692 -59164190 - MLT1I LTR MaLR 0 409 98 1012 132 76 36 chr20 12990566 12990816 -59163066 + L1MA9 LINE L1 6043 6302 -10 3928 181 78 50 chr20 12991108 12991769 -59162113 + MER21A LTR ERV1 8 702 -229 2349 77 27 55 chr20 12991769 12992134 -59161748 + L1PA10 LINE L1 5806 6160 -8 3928 181 78 50 chr20 12992134 12992371 -59161511 + MER21A LTR ERV1 702 931 0 33 0 0 0 chr20 12993082 12993115 -59160767 + AT_rich Low_complexity Low_complexity 1 33 0 256 250 148 23 chr20 12993139 12993227 -59160655 - L2 LINE L2 0 3313 3215 21 57 0 0 chr20 12993317 12993352 -59160530 + AT_rich Low_complexity Low_complexity 1 35 0 8993 205 58 20 chr20 12993392 12993979 -59159903 + L1MC3 LINE L1 5408 5972 -1813 189 0 0 0 chr20 12993979 12994000 -59159882 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8993 205 58 20 chr20 12994000 12994974 -59158908 + L1MC3 LINE L1 5972 6908 -877 270 116 0 0 chr20 12994974 12995017 -59158865 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 8993 205 58 20 chr20 12995017 12995377 -59158505 + L1MC3 LINE L1 6908 7253 -532 2293 116 0 0 chr20 12995377 12995680 -59158202 + AluSx SINE Alu 1 303 -9 8993 205 58 20 chr20 12995680 12996031 -59157851 + L1MC3 LINE L1 7253 7767 -18 1030 280 111 18 chr20 12996057 12996507 -59157375 + MLT1H LTR MaLR 58 549 0 393 350 102 9 chr20 12996948 12997271 -59156611 + MLT1I LTR MaLR 57 409 0 223 195 0 0 chr20 12997484 12997525 -59156357 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2337 128 11 22 chr20 12997635 12998003 -59155879 - THE1B LTR MaLR 0 364 1 218 371 69 9 chr20 13000352 13000468 -59153414 - MER5A DNA MER1_type -12 177 55 24 0 0 0 chr20 13000470 13000494 -59153388 + AT_rich Low_complexity Low_complexity 1 24 0 1578 273 25 2 chr20 13000977 13001409 -59152473 - LTR16C LTR ERVL -18 473 32 2196 125 0 6 chr20 13001952 13002322 -59151560 + AluSx SINE Alu 1 368 0 24 77 0 0 chr20 13002356 13002408 -59151474 + AT_rich Low_complexity Low_complexity 1 52 0 1574 264 55 27 chr20 13004859 13005498 -59148384 - L1ME3A LINE L1 -52 6118 5462 224 278 0 0 chr20 13005843 13005897 -59147985 + (CAA)n Simple_repeat Simple_repeat 1 54 0 225 108 0 0 chr20 13006787 13006824 -59147058 + (T)n Simple_repeat Simple_repeat 1 37 0 210 37 0 0 chr20 13006980 13007007 -59146875 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 240 86 0 0 chr20 13007538 13007573 -59146309 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 907 167 13 0 chr20 13007593 13007743 -59146139 + FRAM SINE Alu 23 174 -2 518 336 38 38 chr20 13008993 13009308 -59144574 + L2 LINE L2 2998 3312 -1 636 304 88 25 chr20 13010086 13010369 -59143513 + LTR16C LTR ERVL 191 491 0 731 213 136 102 chr20 13010801 13011242 -59142640 + LTR16A1 LTR ERVL 1 456 -1 200 94 31 0 chr20 13011844 13011876 -59142006 + CT-rich Low_complexity Low_complexity 2 34 0 1498 229 116 25 chr20 13012145 13012685 -59141197 + L1ME3A LINE L1 5584 6163 -7 473 296 82 0 chr20 13013008 13013167 -59140715 - MIR3 SINE MIR -1 207 36 290 310 76 13 chr20 13013574 13013732 -59140150 - MER5B DNA MER1_type 0 178 11 244 185 25 37 chr20 13014374 13014392 -59139490 + (TTAA)n Simple_repeat Simple_repeat 4 21 -62 2130 119 0 24 chr20 13014392 13014686 -59139196 + AluSq SINE Alu 1 287 -26 244 185 25 37 chr20 13014686 13014748 -59139134 + (TTAA)n Simple_repeat Simple_repeat 21 83 0 214 182 73 0 chr20 13014795 13014850 -59139032 - L2 LINE L2 -90 3223 3165 2116 136 3 3 chr20 13015075 13015383 -59138499 + AluSx SINE Alu 1 308 -4 225 356 11 11 chr20 13015613 13015700 -59138182 - MIR SINE MIR -69 139 53 428 234 28 9 chr20 13016959 13017066 -59136816 + MER5A DNA MER1_type 2 110 -79 548 319 94 4 chr20 13017846 13018081 -59135801 - MIR SINE MIR 0 262 7 354 269 126 63 chr20 13018524 13018747 -59135135 + MIR SINE MIR 24 260 -2 318 50 0 0 chr20 13019453 13019493 -59134389 + (TG)n Simple_repeat Simple_repeat 2 41 0 1382 207 0 0 chr20 13019573 13019819 -59134063 + AluJo SINE Alu 1 246 -66 255 31 0 0 chr20 13019819 13019851 -59134031 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 427 271 130 38 chr20 13021889 13022151 -59131731 - MLT1H LTR MaLR -259 290 5 676 187 105 0 chr20 13022544 13022715 -59131167 + MER53 DNA DNA 1 189 0 33 0 0 0 chr20 13023330 13023363 -59130519 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr20 13023684 13023716 -59130166 + AT_rich Low_complexity Low_complexity 1 32 0 192 326 51 41 chr20 13024343 13024441 -59129441 - L2 LINE L2 -23 3249 3151 237 324 59 15 chr20 13025400 13025530 -59128352 + MIR SINE MIR 28 132 -76 23 0 0 0 chr20 13025820 13025843 -59128039 + AT_rich Low_complexity Low_complexity 1 23 0 21669 134 14 78 chr20 13025908 13030267 -59123615 + L1PA7 LINE L1 9 4085 -2061 180 97 0 0 chr20 13030274 13030305 -59123577 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 9480 85 3 0 chr20 13030342 13032415 -59121467 + L1PA7 LINE L1 4072 6151 -3 354 296 16 16 chr20 13033202 13033327 -59120555 + MER5A DNA MER1_type 8 132 -57 505 222 161 43 chr20 13033956 13034118 -59119764 + MER5A DNA MER1_type 9 189 0 1068 261 96 58 chr20 13035348 13035746 -59118136 - LTR16C LTR ERVL -8 483 71 553 300 172 58 chr20 13035925 13037028 -59116854 + L2 LINE L2 1983 3197 -75 1372 195 59 72 chr20 13037260 13037634 -59116248 - MLT1B LTR MaLR 0 390 22 22 35 0 0 chr20 13038088 13038117 -59115765 + AT_rich Low_complexity Low_complexity 1 29 0 189 74 0 0 chr20 13038303 13038330 -59115552 + (TTTCC)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr20 13038743 13038769 -59115113 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr20 13039005 13039027 -59114855 + AT_rich Low_complexity Low_complexity 1 22 0 1169 240 71 45 chr20 13040146 13040571 -59113311 + LTR16A1 LTR ERVL 3 438 -19 21 0 0 0 chr20 13040801 13040822 -59113060 + AT_rich Low_complexity Low_complexity 1 21 0 355 329 14 14 chr20 13040930 13041076 -59112806 + GA-rich Low_complexity Low_complexity 3 148 0 231 422 54 5 chr20 13041603 13041788 -59112094 - MIR SINE MIR -20 242 49 213 355 0 26 chr20 13042440 13042516 -59111366 + L3 LINE CR1 1499 1572 -5 21 36 0 0 chr20 13042669 13042697 -59111185 + AT_rich Low_complexity Low_complexity 1 28 0 68 55 0 0 chr20 13043108 13043218 -59110664 + AT_rich Low_complexity Low_complexity 1 110 0 343 307 108 47 chr20 13045258 13045470 -59108412 - MIR SINE MIR -17 245 21 375 306 0 21 chr20 13045595 13045739 -59108143 + L1MC4a LINE L1 5696 5836 -1972 333 0 0 0 chr20 13046408 13046445 -59107437 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr20 13047331 13047359 -59106523 + AT_rich Low_complexity Low_complexity 1 28 0 209 252 8 24 chr20 13048614 13048737 -59105145 + CT-rich Low_complexity Low_complexity 2 122 0 321 26 0 0 chr20 13048788 13048826 -59105056 + (CA)n Simple_repeat Simple_repeat 1 38 0 355 333 138 5 chr20 13048826 13049021 -59104861 - MIR SINE MIR -14 248 28 295 298 51 75 chr20 13049067 13049359 -59104523 + L1ME LINE L1 5406 5690 -431 413 290 68 46 chr20 13049458 13049589 -59104293 - L1ME3A LINE L1 -1 6169 6042 1537 97 0 5 chr20 13049589 13049795 -59104087 + AluY SINE Alu 104 308 -3 413 290 68 46 chr20 13049795 13050690 -59103192 - L1ME3A LINE L1 -128 6042 4917 289 346 13 0 chr20 13050868 13051024 -59102858 + (CCCTAA)n Simple_repeat Simple_repeat 5 162 0 435 239 58 13 chr20 13051162 13051317 -59102565 - L1ME3A LINE L1 -3381 2765 2604 637 273 108 60 chr20 13051556 13051871 -59102011 + MLT1H LTR MaLR 220 549 0 988 238 68 57 chr20 13051937 13052307 -59101575 - MLT1A2 LTR MaLR 0 374 1 23 0 0 0 chr20 13053066 13053089 -59100793 + AT_rich Low_complexity Low_complexity 1 23 0 253 265 199 15 chr20 13053372 13053508 -59100374 + MIR SINE MIR 28 188 -74 1978 148 9 6 chr20 13053965 13054302 -59099580 - L1MB3 LINE L1 -47 6372 6035 4674 232 53 20 chr20 13054311 13055824 -59098058 - L1MB3 LINE L1 -1016 5366 3616 944 250 44 24 chr20 13055796 13056282 -59097600 - L1MB3 LINE L1 -4050 2334 1747 * 266 293 0 13 chr20 13056304 13056379 -59097503 - MIR SINE MIR -140 122 49 203 286 0 14 chr20 13056524 13056594 -59097288 + (TAA)n Simple_repeat Simple_repeat 2 70 0 25 0 0 0 chr20 13056881 13056906 -59096976 + AT_rich Low_complexity Low_complexity 1 25 0 495 315 79 0 chr20 13057523 13057688 -59096194 + L2 LINE L2 2433 2610 -704 4854 143 55 22 chr20 13057703 13058241 -59095641 - L1MA10 LINE L1 -7 6327 5745 396 0 0 0 chr20 13058241 13058285 -59095597 + (TG)n Simple_repeat Simple_repeat 2 45 0 4854 143 55 22 chr20 13058285 13058647 -59095235 - L1MA10 LINE L1 -589 5745 5397 2637 93 6 105 chr20 13058647 13059148 -59094734 + L1PB1 LINE L1 5695 6150 -1 3161 201 26 15 chr20 13059191 13059917 -59093965 + L1 LINE L1 4663 5396 -750 681 337 69 33 chr20 13059917 13060446 -59093436 + L2 LINE L2 2601 3156 -157 764 247 22 6 chr20 13060454 13060632 -59093250 + MER5A DNA MER1_type 9 189 0 590 277 28 21 chr20 13060663 13060804 -59093078 + L2 LINE L2 3172 3313 0 233 254 17 0 chr20 13060917 13060976 -59092906 - L1ME1 LINE L1 -110 6056 5997 574 160 0 0 chr20 13060980 13061086 -59092796 + L1MA8 LINE L1 6073 6178 -113 2335 204 33 95 chr20 13061098 13062171 -59091711 - L1ME1 LINE L1 -167 5999 5007 272 279 12 35 chr20 13063916 13064002 -59089880 - MIR SINE MIR -113 149 66 513 289 90 45 chr20 13064055 13064321 -59089561 - MLT1I LTR MaLR -31 378 101 244 337 22 11 chr20 13064328 13064420 -59089462 - L2 LINE L2 -189 3083 2991 301 300 209 5 chr20 13065281 13065632 -59088250 - LTR50 LTR ERVL 0 795 326 283 270 31 44 chr20 13065646 13065751 -59088131 + MER5A DNA MER1_type 59 155 -23 609 198 16 115 chr20 13066227 13066409 -59087473 + MLT1H LTR MaLR 1 164 -385 2297 170 40 2 chr20 13066424 13066853 -59087029 + L1MB3 LINE L1 5731 6175 -8 486 204 88 0 chr20 13066963 13067110 -59086772 + LTR37A LTR ERV1 92 251 -175 3795 195 23 50 chr20 13067166 13068824 -59085058 - L1MB7 LINE L1 -11 6173 4562 348 213 31 16 chr20 13068824 13068951 -59084931 + LTR37A LTR ERV1 298 426 0 678 331 75 68 chr20 13068956 13069690 -59084192 + L2 LINE L2 2113 2851 -463 781 287 79 53 chr20 13070066 13070421 -59083461 - MLT1K LTR MaLR -35 553 190 514 100 0 0 chr20 13070466 13070536 -59083346 + Alu SINE Alu 228 297 -15 236 304 0 29 chr20 13070636 13070705 -59083177 + L2 LINE L2 3205 3271 -1 398 350 35 15 chr20 13070775 13070980 -59082902 + MIR SINE MIR 37 244 -18 272 102 20 0 chr20 13071155 13071204 -59082678 + (GA)n Simple_repeat Simple_repeat 1 50 0 329 330 81 17 chr20 13073185 13073358 -59080524 + MLT1J2 LTR MaLR 213 396 -54 198 0 0 0 chr20 13073397 13073419 -59080463 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 290 380 53 12 chr20 13073589 13073760 -59080122 + MIR SINE MIR 5 182 -80 285 301 97 19 chr20 13074391 13074494 -59079388 + L2 LINE L2 3119 3229 -43 436 301 14 42 chr20 13074664 13074807 -59079075 + MER5A DNA MER1_type 47 185 -4 1512 187 12 22 chr20 13075673 13075994 -59077888 - L1MB8 LINE L1 -6 6172 5855 7137 238 46 29 chr20 13076042 13076053 -59077829 - L1MB8 LINE L1 -689 5495 5486 2081 50 123 0 chr20 13076053 13076330 -59077552 - AluY SINE Alu 0 311 1 7137 238 46 29 chr20 13076330 13077764 -59076118 - L1MB8 LINE L1 -698 5486 4078 1799 133 101 17 chr20 13077764 13078110 -59075772 + THE1C LTR MaLR 1 375 0 7137 238 46 29 chr20 13078110 13079440 -59074442 - L1MB8 LINE L1 -2106 4078 2669 402 198 58 0 chr20 13079455 13079541 -59074341 + MER5A DNA MER1_type 99 189 0 222 385 10 0 chr20 13080206 13080302 -59073580 + L3 LINE CR1 1016 1112 -465 657 139 31 7 chr20 13080584 13080782 -59073100 + LTR16A1 LTR ERVL 216 457 0 1653 144 12 0 chr20 13080942 13081185 -59072697 - AluSx SINE Alu -17 295 50 216 329 29 50 chr20 13081701 13081841 -59072041 + L3 LINE CR1 1204 1340 -237 289 326 141 28 chr20 13081876 13082228 -59071654 - L2 LINE L2 -185 3087 2702 1106 204 63 42 chr20 13082635 13083018 -59070864 - MER3 DNA MER1_type 0 2624 2234 408 198 45 9 chr20 13083020 13083131 -59070751 - MER3 DNA MER1_type -41 168 54 386 260 178 20 chr20 13083152 13083298 -59070584 + MER5A DNA MER1_type 9 177 -12 23 54 0 0 chr20 13084113 13084150 -59069732 + AT_rich Low_complexity Low_complexity 1 37 0 1423 169 4 66 chr20 13085134 13085407 -59068475 - AluJo SINE Alu -56 256 1 354 175 26 0 chr20 13085528 13085642 -59068240 + (CA)n Simple_repeat Simple_repeat 1 117 0 264 77 0 0 chr20 13086823 13086862 -59067020 + (GA)n Simple_repeat Simple_repeat 1 39 0 1558 242 41 32 chr20 13086888 13087380 -59066502 - LTR40a LTR ERVL -23 496 1 22 70 0 0 chr20 13087553 13087596 -59066286 + AT_rich Low_complexity Low_complexity 1 43 0 273 57 0 0 chr20 13087610 13087645 -59066237 + (TATG)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr20 13087787 13087812 -59066070 + AT_rich Low_complexity Low_complexity 1 25 0 370 277 59 0 chr20 13087994 13088113 -59065769 - MER117 DNA MER1_type -57 140 15 576 289 93 0 chr20 13088260 13088464 -59065418 - MIR SINE MIR -28 234 12 345 268 0 0 chr20 13088672 13088743 -59065139 + MER81 DNA DNA 1 71 -43 205 314 66 41 chr20 13088993 13089008 -59064874 + MER5A DNA MER1_type 3 20 -169 596 250 60 12 chr20 13089008 13089176 -59064706 - MER5A DNA MER1_type -2 187 12 505 280 90 65 chr20 13090085 13090550 -59063332 + L1MC5 LINE L1 7246 7722 -239 27 29 0 0 chr20 13090568 13090602 -59063280 + AT_rich Low_complexity Low_complexity 1 34 0 4504 157 61 40 chr20 13092856 13093656 -59060226 - L1MA9 LINE L1 0 6312 5479 1891 143 0 0 chr20 13093656 13093922 -59059960 - AluSx SINE Alu -46 266 1 4504 157 61 40 chr20 13093922 13094302 -59059580 - L1MA9 LINE L1 -833 5479 5108 31 68 0 0 chr20 13095660 13095719 -59058163 + AT_rich Low_complexity Low_complexity 1 59 0 898 228 64 14 chr20 13096100 13096319 -59057563 + MIR SINE MIR 5 234 -28 1962 127 32 0 chr20 13096553 13096836 -59057046 - AluSc SINE Alu -17 292 1 266 315 43 0 chr20 13097060 13097152 -59056730 - L2 LINE L2 -247 3066 2971 922 147 66 30 chr20 13097234 13097431 -59056451 - L1MB5 LINE L1 -8 6166 5963 644 214 0 0 chr20 13097434 13097588 -59056294 + L1MB8 LINE L1 5721 5874 -304 354 269 55 63 chr20 13097590 13097861 -59056021 + MLT1G LTR MaLR 98 366 -224 1999 267 125 32 chr20 13098048 13099095 -59054787 - L2 LINE L2 -135 3178 2042 217 277 109 10 chr20 13099384 13099485 -59054397 - L2 LINE L2 -528 2786 2676 1122 50 0 0 chr20 13099537 13099678 -59054204 + (TAAAA)n Simple_repeat Simple_repeat 2 142 0 797 202 11 16 chr20 13100802 13101344 -59052538 + GA-rich Low_complexity Low_complexity 1 539 0 2158 120 0 0 chr20 13101349 13101648 -59052234 - AluSx SINE Alu -13 299 1 238 296 0 34 chr20 13101884 13101972 -59051910 + MER5B DNA MER1_type 25 109 -69 245 283 0 76 chr20 13103757 13103849 -59050033 + MIR SINE MIR 114 198 -64 277 307 175 18 chr20 13105623 13105789 -59048093 + MIR SINE MIR 1 192 -70 665 262 58 52 chr20 13105821 13106184 -59047698 - LTR33 LTR ERVL -18 503 139 793 233 33 14 chr20 13106418 13106628 -59047254 + LTR16C LTR ERVL 278 491 0 216 319 28 0 chr20 13107362 13107434 -59046448 + L2 LINE L2 3236 3309 -4 203 218 18 18 chr20 13107570 13107625 -59046257 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 1408 125 65 0 chr20 13108266 13108482 -59045400 + MER30 DNA MER1_type 1 230 0 864 261 103 58 chr20 13108740 13109185 -59044697 - MLT1H LTR MaLR -75 474 10 189 220 0 60 chr20 13109233 13109283 -59044599 - L3 LINE CR1 -32 1545 1499 240 35 0 0 chr20 13109293 13109322 -59044560 + (CA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr20 13110464 13110490 -59043392 + (CA)n Simple_repeat Simple_repeat 2 27 0 214 246 0 33 chr20 13111408 13111469 -59042413 + CT-rich Low_complexity Low_complexity 1 59 0 673 307 197 13 chr20 13111904 13112453 -59041429 + L2 LINE L2 2639 3300 -13 819 278 195 20 chr20 13112778 13112926 -59040956 - L2 LINE L2 0 3313 3192 2152 102 0 3 chr20 13112926 13113238 -59040644 - AluSp SINE Alu 0 311 1 819 278 195 20 chr20 13113238 13113554 -59040328 - L2 LINE L2 -121 3192 2769 26 0 0 0 chr20 13113785 13113811 -59040071 + AT_rich Low_complexity Low_complexity 1 26 0 1804 174 96 53 chr20 13113847 13114370 -59039512 - L1MB8 LINE L1 -5 6173 5629 398 364 12 12 chr20 13115926 13116088 -59037794 - MIR3 SINE MIR -11 197 36 1542 231 10 8 chr20 13116487 13116876 -59037006 + MER63 DNA MER1_type 672 1061 -1 331 345 131 1 chr20 13117202 13117381 -59036501 - MIR SINE MIR -38 224 25 1895 139 3 16 chr20 13117406 13117709 -59036173 + AluSx SINE Alu 1 299 -13 669 268 35 10 chr20 13118086 13118341 -59035541 - MLT1H LTR MaLR -233 316 13 5781 197 12 4 chr20 13118848 13120203 -59033679 - L1 LINE L1 -901 5245 3881 776 48 19 0 chr20 13120209 13120313 -59033569 + L1P5 LINE L1 5686 5791 -360 301 196 0 0 chr20 13120328 13120384 -59033498 - L1MC4 LINE L1 -1339 6703 6648 2720 68 11 3 chr20 13120385 13120751 -59033131 + L1PB1 LINE L1 5782 6150 -1 23 68 0 0 chr20 13120751 13120795 -59033087 + AT_rich Low_complexity Low_complexity 1 44 0 384 311 172 27 chr20 13120795 13121161 -59032721 + LTR33 LTR ERVL 101 519 -2 520 301 86 0 chr20 13123485 13123648 -59030234 - MIR SINE MIR 0 262 86 509 265 68 0 chr20 13124653 13124815 -59029067 - MLT1J LTR MaLR -322 189 17 212 306 228 11 chr20 13125805 13125985 -59027897 - MIR SINE MIR -39 223 5 300 244 101 50 chr20 13127061 13127180 -59026702 + MIR3 SINE MIR 72 196 -12 22 0 0 0 chr20 13131779 13131801 -59022081 + AT_rich Low_complexity Low_complexity 1 22 0 223 401 167 0 chr20 13132933 13133065 -59020817 - L2 LINE L2 0 3272 3119 2444 70 0 10 chr20 13133349 13133651 -59020231 + AluY SINE Alu 1 299 -12 731 349 111 18 chr20 13133834 13134600 -59019282 - L2 LINE L2 -639 2675 1839 1749 169 6 31 chr20 13135340 13135660 -59018222 - AluSx SINE Alu 0 312 1 742 315 98 19 chr20 13135904 13136282 -59017600 - L2 LINE L2 0 3313 2906 566 276 24 93 chr20 13137016 13137349 -59016533 + MER102b DNA MER1_type 15 324 -17 1941 144 16 48 chr20 13137712 13138088 -59015794 - THE1B LTR MaLR 0 364 1 306 309 64 0 chr20 13138148 13138258 -59015624 + L2 LINE L2 3145 3261 -11 21 0 0 0 chr20 13139449 13139470 -59014412 + AT_rich Low_complexity Low_complexity 1 21 0 1966 152 13 7 chr20 13139546 13139855 -59014027 - AluSx SINE Alu -1 311 1 1969 149 55 9 chr20 13140110 13140438 -59013444 + MER61A LTR ERV1 1 343 0 1347 251 86 35 chr20 13140533 13141055 -59012827 + MLT1H LTR MaLR 1 549 0 255 239 0 45 chr20 13142437 13142504 -59011378 + L2 LINE L2 3246 3309 -4 23 33 0 0 chr20 13143388 13143418 -59010464 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr20 13146259 13146295 -59007587 + AT_rich Low_complexity Low_complexity 1 36 0 328 242 0 42 chr20 13146743 13146838 -59007044 - MER81 DNA DNA 0 114 24 1018 241 24 59 chr20 13146871 13147348 -59006534 - MLT1H1 LTR MaLR 0 555 10 266 264 34 37 chr20 13147414 13147526 -59006356 - MIR SINE MIR -63 145 38 1536 85 0 19 chr20 13147709 13147921 -59005961 - AluY SINE Alu -11 300 93 1041 244 44 87 chr20 13148118 13148577 -59005305 - MLT1H LTR MaLR -93 456 18 348 285 95 65 chr20 13149226 13149489 -59004393 + MLT1H LTR MaLR 81 351 -198 216 259 0 0 chr20 13150125 13150183 -59003699 + GA-rich Low_complexity Low_complexity 1 58 0 282 270 61 52 chr20 13150227 13150342 -59003540 + MIR SINE MIR 36 151 -57 713 234 112 24 chr20 13150699 13150904 -59002978 + MIR SINE MIR 40 262 0 516 273 55 16 chr20 13153646 13153829 -59000053 - MIR SINE MIR -3 259 70 21 0 0 0 chr20 13154371 13154392 -58999490 + AT_rich Low_complexity Low_complexity 1 21 0 265 275 197 49 chr20 13154499 13154885 -58998997 - L3 LINE CR1 -121 1456 1014 848 275 17 13 chr20 13155729 13155962 -58997920 - MIR SINE MIR -6 256 23 843 230 5 10 chr20 13156356 13156556 -58997326 - MER113 DNA MER1_type? -66 455 257 245 234 11 43 chr20 13157016 13157110 -58996772 - MER113 DNA MER1_type? -320 201 111 728 197 45 30 chr20 13157195 13157459 -58996423 + LTR37B LTR ERV1 201 468 0 421 292 147 42 chr20 13160663 13161016 -58992866 - L2 LINE L2 -2 3311 2922 309 198 148 60 chr20 13161374 13161556 -58992326 - L1ME3A LINE L1 -9 6161 5964 307 184 53 0 chr20 13161715 13161791 -58992091 - L1ME3 LINE L1 -2 6160 6081 1928 158 10 3 chr20 13162758 13163062 -58990820 - AluJb SINE Alu -6 306 1 194 227 201 45 chr20 13163586 13163740 -58990142 + MER5A DNA MER1_type 10 187 -2 * 547 100 31 8 chr20 13163647 13163753 -58990129 - MER5A DNA MER1_type -77 112 4 336 358 21 21 chr20 13164405 13164595 -58989287 - MIR SINE MIR -41 221 32 285 29 0 0 chr20 13165335 13165369 -58988513 + (CA)n Simple_repeat Simple_repeat 1 34 0 709 233 23 6 chr20 13168038 13168210 -58985672 - MER5B DNA MER1_type 0 178 4 332 311 66 20 chr20 13168464 13168615 -58985267 + MIR3 SINE MIR 37 194 -14 800 280 0 0 chr20 13169384 13169573 -58984309 + MER58A DNA MER1_type 7 195 -29 400 276 93 45 chr20 13172911 13173179 -58980703 - L1MEd LINE L1 -2727 3402 3122 2163 149 95 0 chr20 13173212 13173602 -58980280 + MSTA LTR MaLR 2 428 0 405 328 78 0 chr20 13173802 13174034 -58979848 - L1MEd LINE L1 -3624 2505 2256 22 35 0 0 chr20 13174353 13174382 -58979500 + AT_rich Low_complexity Low_complexity 1 29 0 564 287 70 24 chr20 13174594 13175335 -58978547 - L1MEd LINE L1 -4522 1607 925 315 0 0 0 chr20 13175781 13175816 -58978066 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 51 0 0 chr20 13176144 13176183 -58977699 + AT_rich Low_complexity Low_complexity 1 39 0 253 390 44 25 chr20 13176318 13176477 -58977405 + L3 LINE CR1 1394 1555 -22 623 307 46 28 chr20 13176807 13177025 -58976857 - MIR SINE MIR -38 224 3 186 150 0 0 chr20 13177181 13177221 -58976661 + (TG)n Simple_repeat Simple_repeat 1 40 0 414 370 17 0 chr20 13178290 13178463 -58975419 - MIR3 SINE MIR -3 205 30 217 236 6 45 chr20 13178706 13178863 -58975019 + (TA)n Simple_repeat Simple_repeat 2 152 0 1832 166 55 17 chr20 13179178 13179539 -58974343 + THE1C LTR MaLR 1 375 0 29 0 0 0 chr20 13181365 13181394 -58972488 + AT_rich Low_complexity Low_complexity 1 29 0 1379 227 89 53 chr20 13182053 13182397 -58971485 - MLT1F1 LTR MaLR -4 563 264 444 51 0 0 chr20 13182397 13182456 -58971426 + (CA)n Simple_repeat Simple_repeat 2 60 0 1379 227 89 53 chr20 13182456 13182730 -58971152 - MLT1F1 LTR MaLR -303 264 1 311 307 0 0 chr20 13183315 13183390 -58970492 - MIR3 SINE MIR -10 198 124 206 274 137 14 chr20 13183603 13183676 -58970206 + L2 LINE L2 3173 3254 -18 185 65 32 0 chr20 13185355 13185386 -58968496 + (CAATT)n Simple_repeat Simple_repeat 3 34 0 2188 62 7 11 chr20 13188342 13188614 -58965268 + AluY SINE Alu 1 271 -40 1652 276 72 4 chr20 13188954 13189414 -58964468 + MLT1H LTR MaLR 11 501 -48 568 262 84 31 chr20 13189414 13189700 -58964182 + L1MC4 LINE L1 7452 7752 -290 379 256 22 0 chr20 13189700 13189790 -58964092 - Tigger5 DNA MER2_type 0 2323 2232 344 200 14 14 chr20 13189831 13189901 -58963981 - Tigger5 DNA MER2_type 0 2323 2254 291 226 0 0 chr20 13189875 13189928 -58963954 - Tigger5 DNA MER2_type -2270 53 1 * 836 98 98 35 chr20 13189981 13190152 -58963730 + Tigger7 DNA MER2_type 2230 2411 -80 1615 146 4 0 chr20 13190152 13190412 -58963470 - Tigger5 DNA MER2_type -1 2322 2062 322 175 0 32 chr20 13190410 13190473 -58963409 - Tigger5 DNA MER2_type -2261 62 2 * 467 195 46 0 chr20 13190473 13190553 -58963329 + Tigger7 DNA MER2_type 2504 2587 0 397 248 29 15 chr20 13190553 13190690 -58963192 + L1MC4 LINE L1 7753 7891 -151 323 287 78 0 chr20 13190760 13190889 -58962993 + L1MC4 LINE L1 7904 8042 0 1995 162 20 26 chr20 13192448 13192800 -58961082 + THE1B LTR MaLR 15 364 0 11131 100 15 6 chr20 13192800 13194367 -58959515 + THE1B-int LTR MaLR 1 1580 0 2108 133 22 30 chr20 13194367 13194729 -58959153 + THE1B LTR MaLR 1 359 -5 253 263 20 61 chr20 13194889 13194988 -58958894 - MIR SINE MIR -162 100 6 282 116 0 0 chr20 13195452 13195495 -58958387 + (TG)n Simple_repeat Simple_repeat 2 44 0 2204 113 3 0 chr20 13195516 13195816 -58958066 - AluSp SINE Alu -11 302 2 1692 202 108 31 chr20 13195816 13196252 -58957630 - MLT2B1 LTR ERVL -47 473 1 520 279 83 57 chr20 13196921 13197186 -58956696 + MLT1H LTR MaLR 38 309 -240 30 0 0 0 chr20 13197445 13197475 -58956407 + AT_rich Low_complexity Low_complexity 1 30 0 377 230 10 0 chr20 13197527 13197627 -58956255 + (TA)n Simple_repeat Simple_repeat 2 102 0 376 311 23 38 chr20 13198511 13198643 -58955239 + MIR SINE MIR 16 145 -63 22 70 0 0 chr20 13200661 13200704 -58953178 + AT_rich Low_complexity Low_complexity 1 43 0 33 25 0 0 chr20 13201077 13201117 -58952765 + AT_rich Low_complexity Low_complexity 1 40 0 863 156 18 0 chr20 13201135 13201302 -58952580 - L1MA8 LINE L1 -4 6287 6118 566 114 0 0 chr20 13201314 13201402 -58952480 + L1MA8 LINE L1 6047 6134 -157 334 302 21 10 chr20 13201411 13201507 -58952375 + MIR SINE MIR 90 186 -76 302 338 81 26 chr20 13201664 13201898 -58951984 + MIR SINE MIR 1 247 -15 280 352 33 24 chr20 13202183 13202393 -58951489 - L3 LINE CR1 -119 1458 1247 535 271 7 14 chr20 13202709 13202853 -58951029 - MER45A DNA AcHobo 0 178 36 317 315 123 19 chr20 13203390 13203552 -58950330 + HAL1 LINE L1 1274 1452 -1055 525 313 107 26 chr20 13203863 13204096 -58949786 + MIR SINE MIR 8 259 -3 1533 291 72 50 chr20 13204195 13205519 -58948363 + L1ME3A LINE L1 3758 5111 -1035 225 260 39 8 chr20 13205551 13205678 -58948204 + (TA)n Simple_repeat Simple_repeat 1 131 0 379 310 0 0 chr20 13205735 13205848 -58948034 + L1ME3A LINE L1 5717 5829 -341 626 211 72 0 chr20 13205857 13206037 -58947845 + L1ME3A LINE L1 5796 5988 -182 258 255 69 20 chr20 13206077 13206179 -58947703 + L1ME3A LINE L1 6060 6166 -4 3311 123 16 0 chr20 13206192 13206678 -58947204 + L1PA7 LINE L1 8 501 -5960 13467 95 33 0 chr20 13206678 13209500 -58944382 + L1PA7 LINE L1 3668 6469 0 24 0 0 0 chr20 13209556 13209580 -58944302 + AT_rich Low_complexity Low_complexity 1 24 0 256 245 157 27 chr20 13209586 13209847 -58944035 + L1M4 LINE L1 4311 4605 -1541 234 241 0 0 chr20 13209920 13209974 -58943908 - MLT1F1 LTR MaLR -14 553 500 6436 249 59 44 chr20 13209975 13211602 -58942280 + L1MC3 LINE L1 8 1609 -4955 351 0 0 0 chr20 13211602 13211641 -58942241 + (CA)n Simple_repeat Simple_repeat 2 40 0 6436 249 59 44 chr20 13211641 13213327 -58940555 + L1MC3 LINE L1 1609 3268 -3296 2482 111 56 50 chr20 13213327 13213770 -58940112 + L1PA16 LINE L1 5717 6162 -4 6436 249 59 44 chr20 13213770 13215535 -58938347 + L1MC3 LINE L1 3268 5178 -1386 6047 213 39 18 chr20 13215532 13215549 -58938333 + L1MC3 LINE L1 5556 5571 -993 * 207 0 0 0 chr20 13215549 13215572 -58938310 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6047 213 39 18 chr20 13215572 13217094 -58936788 + L1MC3 LINE L1 5571 5821 -743 3812 181 44 55 chr20 13217106 13217504 -58936378 + L1MC3 LINE L1 7250 7651 -552 2496 190 45 61 chr20 13217504 13218126 -58935756 - LTR9 LTR ERV1 0 612 1 3812 181 44 55 chr20 13218126 13218202 -58935680 + L1MC3 LINE L1 7651 7726 -477 2332 154 22 74 chr20 13218202 13218552 -58935330 - LTR54 LTR ERV1 0 510 196 2209 85 3 19 chr20 13218552 13218859 -58935023 + AluY SINE Alu 1 302 -9 2332 154 22 74 chr20 13218859 13219046 -58934836 - LTR54 LTR ERV1 -314 196 1 3812 181 44 55 chr20 13219046 13219519 -58934363 + L1MC3 LINE L1 7726 8188 -15 418 125 117 102 chr20 13219675 13219803 -58934079 + L1MC3 LINE L1 7656 7785 0 225 278 139 57 chr20 13219915 13220109 -58933773 - MLT1F1 LTR MaLR -226 323 114 339 343 6 6 chr20 13220221 13220393 -58933489 + L1M4 LINE L1 4666 4837 -1309 286 282 0 32 chr20 13220454 13220578 -58933304 + L1M4 LINE L1 4996 5115 -1031 28 29 0 0 chr20 13221336 13221371 -58932511 + AT_rich Low_complexity Low_complexity 1 35 0 432 266 58 7 chr20 13222510 13222664 -58931218 + MLT1J2 LTR MaLR 1 162 -288 1821 231 135 19 chr20 13222676 13223188 -58930694 - MLT1E LTR MaLR -8 585 15 291 71 0 0 chr20 13223406 13223448 -58930434 + (GA)n Simple_repeat Simple_repeat 2 43 0 22 80 0 0 chr20 13223923 13223973 -58929909 + AT_rich Low_complexity Low_complexity 1 50 0 2335 109 0 0 chr20 13224024 13224336 -58929546 - AluSx SINE Alu 0 312 1 669 229 21 36 chr20 13224389 13224581 -58929301 - MER5A DNA MER1_type 0 189 1 1015 227 59 12 chr20 13224603 13225065 -58928817 + MER34 LTR ERV1 28 542 0 201 170 19 57 chr20 13225303 13225356 -58928526 + L2 LINE L2 3263 3313 0 1045 221 74 140 chr20 13225446 13225917 -58927965 + MLT1H LTR MaLR 1 440 -109 4647 192 98 79 chr20 13226004 13226589 -58927293 - L1MC3 LINE L1 0 7785 7213 289 235 12 25 chr20 13226589 13226670 -58927212 - MLT1F1 LTR MaLR -442 125 46 4647 192 98 79 chr20 13226670 13227505 -58926377 - L1MC3 LINE L1 -572 7213 6256 1654 182 117 17 chr20 13227536 13227894 -58925988 - MSTD LTR MaLR -2 394 1 1041 230 58 54 chr20 13228223 13228680 -58925202 - MER39 LTR ERV1 -36 671 1 24 53 0 0 chr20 13229331 13229369 -58924513 + AT_rich Low_complexity Low_complexity 1 38 0 644 311 84 63 chr20 13229502 13229988 -58923894 + L1MDa LINE L1 1307 1792 -4748 278 286 62 0 chr20 13230018 13230130 -58923752 + L1MDa LINE L1 1861 1979 -4561 340 295 16 16 chr20 13230467 13230596 -58923286 - MLT1E LTR MaLR 0 593 465 381 278 36 101 chr20 13230638 13230886 -58922996 + L1MDa LINE L1 2610 2841 -3699 302 348 44 0 chr20 13230897 13231167 -58922715 + L1MDa LINE L1 2943 3224 -3316 533 234 23 100 chr20 13231215 13231514 -58922368 + Charlie4a DNA MER1_type 61 336 -172 36 40 0 0 chr20 13231534 13231584 -58922298 + AT_rich Low_complexity Low_complexity 1 50 0 380 177 28 50 chr20 13231597 13231778 -58922104 + (TATAA)n Simple_repeat Simple_repeat 3 179 0 27 73 0 0 chr20 13231828 13231883 -58921999 + AT_rich Low_complexity Low_complexity 1 55 0 228 35 0 0 chr20 13231893 13231922 -58921960 + (TA)n Simple_repeat Simple_repeat 1 29 0 324 0 0 0 chr20 13231924 13231960 -58921922 + (TG)n Simple_repeat Simple_repeat 1 36 0 1580 175 68 15 chr20 13231960 13232106 -58921776 - AluSg SINE Alu -33 277 140 2420 74 3 6 chr20 13232106 13232417 -58921465 - AluY SINE Alu 0 311 2 1580 175 68 15 chr20 13232417 13232533 -58921349 - AluSg SINE Alu -170 140 1 2331 189 13 17 chr20 13232585 13233056 -58920826 - MLT2B1 LTR ERVL -48 472 4 529 252 0 0 chr20 13233156 13233263 -58920619 + MER2 DNA MER2_type 2 108 -237 487 211 128 9 chr20 13234428 13234537 -58919345 - FLAM_A SINE Alu -11 122 1 216 345 134 14 chr20 13234912 13235054 -58918828 - MER5A DNA MER1_type -7 182 24 268 283 242 0 chr20 13235083 13235203 -58918679 - MER5A DNA MER1_type 0 189 41 427 193 47 151 chr20 13235596 13235656 -58918226 - MER5B DNA MER1_type -2 176 111 1887 115 52 0 chr20 13235656 13235961 -58917921 + AluSx SINE Alu 1 319 0 427 193 47 151 chr20 13235961 13236091 -58917791 - MER5B DNA MER1_type -67 111 5 588 349 79 49 chr20 13236475 13236966 -58916916 + L2 LINE L2 2256 2731 -541 1422 188 26 43 chr20 13236966 13237270 -58916612 + AluJo SINE Alu 1 299 -13 588 349 79 49 chr20 13237270 13237751 -58916131 + L2 LINE L2 2731 3244 -28 21 0 0 0 chr20 13237751 13237772 -58916110 + AT_rich Low_complexity Low_complexity 1 21 0 214 288 38 0 chr20 13238079 13238159 -58915723 - MIR3 SINE MIR -50 158 76 1477 245 87 37 chr20 13238492 13239080 -58914802 + MLT1E3 LTR MaLR 1 617 -7 654 254 45 23 chr20 13239242 13239419 -58914463 + MER5A DNA MER1_type 9 189 0 800 183 70 93 chr20 13240580 13240925 -58912957 + LTR37A LTR ERV1 85 421 -5 248 258 0 93 chr20 13241002 13241099 -58912783 + MER58B DNA MER1_type 20 107 -234 31 68 0 0 chr20 13241102 13241161 -58912721 + AT_rich Low_complexity Low_complexity 1 59 0 727 191 66 38 chr20 13241265 13241404 -58912478 - MER6B DNA MER2_type -674 191 44 2366 119 14 8 chr20 13241404 13241766 -58912116 + THE1B LTR MaLR 1 364 0 727 191 66 38 chr20 13241766 13241809 -58912073 - MER6B DNA MER2_type -821 44 4 482 262 8 0 chr20 13241819 13241941 -58911941 + MER58B DNA MER1_type 209 331 -10 2034 158 0 0 chr20 13241999 13242291 -58911591 + AluSx SINE Alu 1 292 -20 394 301 19 0 chr20 13242324 13242427 -58911455 - MER5A DNA MER1_type -83 106 2 2082 188 78 6 chr20 13242457 13242967 -58910915 + L1MC3 LINE L1 7226 7772 -13 561 301 32 40 chr20 13243003 13243239 -58910643 + L1 LINE L1 3547 3780 -2366 2067 139 35 0 chr20 13243239 13243527 -58910355 + AluSx SINE Alu 1 298 -14 561 301 32 40 chr20 13243527 13243695 -58910187 + L1 LINE L1 3780 3948 -2198 306 342 74 54 chr20 13243842 13244140 -58909742 + L1 LINE L1 4081 4384 -1762 264 198 43 35 chr20 13244141 13244257 -58909625 + L1ME2 LINE L1 6038 6154 -10 389 245 34 7 chr20 13244971 13245118 -58908764 - L1ME1 LINE L1 -9 6157 6007 678 303 52 23 chr20 13245782 13246089 -58907793 + MLT1G LTR MaLR 15 330 -260 16184 160 8 21 chr20 13246089 13250534 -58903348 - L1P3 LINE L1 -2012 4449 1 690 189 15 0 chr20 13250626 13250758 -58903124 + MER94 DNA DNA 1 134 0 2210 203 18 25 chr20 13251168 13251657 -58902225 + MER66B LTR ERV1 1 486 0 487 259 48 48 chr20 13251712 13251901 -58901981 - MER5A DNA MER1_type 0 189 1 701 253 6 6 chr20 13251906 13252084 -58901798 - MER5B DNA MER1_type 0 178 1 249 333 13 13 chr20 13252124 13252202 -58901680 + L2 LINE L2 3134 3211 -61 1303 239 72 48 chr20 13252364 13252861 -58901021 - MLT1H LTR MaLR 0 549 41 479 309 149 23 chr20 13254793 13255136 -58898746 - L2 LINE L2 -3 3310 2925 232 177 32 16 chr20 13255173 13255235 -58898647 + (TA)n Simple_repeat Simple_repeat 2 64 0 347 284 35 64 chr20 13255288 13255429 -58898453 + L2 LINE L2 3144 3280 -33 1500 287 58 6 chr20 13255775 13256297 -58897585 - MLT1H LTR MaLR 0 549 1 1013 193 5 24 chr20 13256365 13256577 -58897305 - MER58A DNA MER1_type -15 209 2 890 191 12 0 chr20 13257057 13257230 -58896652 + MER5B DNA MER1_type 1 175 -3 471 263 144 12 chr20 13258491 13258651 -58895231 + MER5A DNA MER1_type 9 189 0 341 344 23 0 chr20 13259661 13259792 -58894090 + MIR SINE MIR 108 241 -21 579 194 0 15 chr20 13260036 13260297 -58893585 + (TG)n Simple_repeat Simple_repeat 1 256 0 477 239 0 11 chr20 13260329 13260796 -58893086 + (TG)n Simple_repeat Simple_repeat 1 461 0 268 291 138 22 chr20 13261574 13261747 -58892135 - MIR SINE MIR -40 168 19 1515 286 67 6 chr20 13261824 13262478 -58891404 - L1ME3A LINE L1 -74 6096 5416 1146 277 16 9 chr20 13262705 13263026 -58890856 + MLT1H LTR MaLR 12 334 -215 2190 101 54 3 chr20 13263289 13263585 -58890297 + AluSx SINE Alu 1 311 -1 479 237 177 8 chr20 13264009 13264152 -58889730 - MER5A DNA MER1_type -31 158 9 1365 185 67 12 chr20 13264687 13264812 -58889070 + AluJb SINE Alu 1 118 -194 396 0 0 0 chr20 13264812 13264856 -58889026 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 1365 185 67 12 chr20 13264856 13264984 -58888898 + AluJb SINE Alu 118 268 -44 260 224 0 0 chr20 13265217 13265266 -58888616 + MER5A DNA MER1_type 26 74 -115 24275 148 8 13 chr20 13265268 13266643 -58887239 + L1PA8A LINE L1 824 2204 -4242 1788 86 4 25 chr20 13266643 13266886 -58886996 - AluY SINE Alu -9 302 65 24275 148 8 13 chr20 13266886 13267358 -58886524 + L1PA8A LINE L1 2204 2677 -3769 267 31 0 0 chr20 13267358 13267390 -58886492 + (CAA)n Simple_repeat Simple_repeat 2 33 0 24275 148 8 13 chr20 13267390 13269137 -58884745 + L1PA8A LINE L1 2677 4431 -2015 2316 99 20 0 chr20 13269137 13269441 -58884441 + AluSg SINE Alu 1 310 0 24275 148 8 13 chr20 13269441 13271492 -58882390 + L1PA8A LINE L1 4431 6443 -3 631 218 16 0 chr20 13271538 13271662 -58882220 + MER5A DNA MER1_type 61 186 -3 250 322 164 34 chr20 13271670 13271816 -58882066 + MER5A DNA MER1_type 19 183 -6 690 343 44 9 chr20 13272641 13272962 -58880920 - LTR16B LTR ERVL -10 454 123 256 218 51 64 chr20 13273671 13273749 -58880133 + MIR SINE MIR 80 156 -106 21 0 0 0 chr20 13273798 13273819 -58880063 + AT_rich Low_complexity Low_complexity 1 21 0 196 370 71 31 chr20 13274208 13274335 -58879547 + MIR3 SINE MIR 2 133 -75 316 269 88 53 chr20 13274856 13275027 -58878855 + MIR3 SINE MIR 26 202 -6 701 240 113 89 chr20 13275148 13275643 -58878239 - MLT1H LTR MaLR -22 527 21 3414 190 118 12 chr20 13275969 13276716 -58877166 - LTR1B LTR ERV1 0 826 1 359 274 171 27 chr20 13277200 13277346 -58876536 - MER5A DNA MER1_type 0 189 23 351 0 0 0 chr20 13278323 13278362 -58875520 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr20 13278709 13278730 -58875152 + AT_rich Low_complexity Low_complexity 1 21 0 210 269 86 21 chr20 13279431 13279524 -58874358 - L2 LINE L2 0 3313 3215 421 291 116 30 chr20 13279548 13279816 -58874066 + L2 LINE L2 3023 3313 0 2671 149 14 0 chr20 13280360 13280782 -58873100 - MSTA LTR MaLR 0 428 1 242 316 117 12 chr20 13281065 13281236 -58872646 + L1MC/D LINE L1 5488 5676 -2132 267 259 0 0 chr20 13281246 13281331 -58872551 + GA-rich Low_complexity Low_complexity 1 85 0 466 227 76 0 chr20 13281541 13281673 -58872209 + LTR50 LTR ERVL 1 142 -653 805 228 107 0 chr20 13282107 13282304 -58871578 + MER20 DNA MER1_type 2 219 0 263 279 33 25 chr20 13282388 13282510 -58871372 + MIR SINE MIR 94 216 -46 247 187 107 6 chr20 13285198 13285281 -58868601 + MLT1J2 LTR MaLR 318 430 0 324 83 0 0 chr20 13286728 13286776 -58867106 + (CA)n Simple_repeat Simple_repeat 2 49 0 1043 292 25 23 chr20 13286815 13287204 -58866678 + LTR16C LTR ERVL 62 486 -5 387 0 0 0 chr20 13287204 13287247 -58866635 + (CA)n Simple_repeat Simple_repeat 2 44 0 438 363 33 20 chr20 13287596 13287841 -58866041 + L3 LINE CR1 404 651 -926 342 362 58 23 chr20 13287942 13288287 -58865595 + L3 LINE CR1 645 1001 -576 500 283 27 80 chr20 13288914 13289159 -58864723 + MIR SINE MIR 6 235 -27 21 36 0 0 chr20 13289182 13289210 -58864672 + AT_rich Low_complexity Low_complexity 1 28 0 21 95 0 0 chr20 13289524 13289587 -58864295 + AT_rich Low_complexity Low_complexity 1 63 0 186 355 82 9 chr20 13289860 13289970 -58863912 - MIR SINE MIR -68 140 23 206 271 186 0 chr20 13290037 13290107 -58863775 - MER5C DNA MER1_type 0 324 242 257 203 95 0 chr20 13290152 13290226 -58863656 - MER5C DNA MER1_type -200 124 44 455 283 12 32 chr20 13290392 13290590 -58863292 + MLT1F1 LTR MaLR 1 197 -370 659 147 0 53 chr20 13290600 13290790 -58863092 + (TC)n Simple_repeat Simple_repeat 1 180 0 202 246 35 0 chr20 13290790 13290847 -58863035 + CT-rich Low_complexity Low_complexity 1 59 0 1546 201 67 24 chr20 13290847 13291220 -58862662 + MLT1F1 LTR MaLR 177 565 -2 688 336 52 17 chr20 13291377 13291766 -58862116 + LTR16A LTR ERVL 43 457 0 221 339 105 8 chr20 13292349 13292473 -58861409 - MIR SINE MIR -49 213 78 344 264 36 0 chr20 13292484 13292594 -58861288 + LTR37B LTR ERV1 7 120 -348 1071 230 24 0 chr20 13292600 13292813 -58861069 + MER58A DNA MER1_type 7 224 0 684 227 42 32 chr20 13292882 13293098 -58860784 + LTR37B LTR ERV1 211 428 -40 1639 189 0 25 chr20 13293104 13293421 -58860461 - AluJb SINE Alu -3 309 1 435 318 59 6 chr20 13295073 13295243 -58858639 - MIR SINE MIR -51 211 33 192 352 0 0 chr20 13295387 13295441 -58858441 - L3 LINE CR1 -5 1572 1519 1086 179 48 0 chr20 13296167 13296374 -58857508 + MER20 DNA MER1_type 2 218 -1 377 350 40 7 chr20 13297073 13297206 -58856676 + MIR3 SINE MIR 20 157 -51 1755 154 89 3 chr20 13297302 13297639 -58856243 - MER47A DNA MER2_type 0 366 1 588 214 8 16 chr20 13298063 13298189 -58855693 + MLT1F LTR MaLR 1 125 -417 1505 223 49 39 chr20 13298281 13298388 -58855494 + MLT1F LTR MaLR 131 235 -307 3096 158 1 72 chr20 13298388 13299058 -58854824 + L1PA15 LINE L1 5543 6165 0 1505 223 49 39 chr20 13299058 13299358 -58854524 + MLT1F LTR MaLR 235 542 0 234 0 0 0 chr20 13299438 13299464 -58854418 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 677 283 42 33 chr20 13300018 13300258 -58853624 - MLT1J1 LTR MaLR -125 321 80 216 0 0 0 chr20 13300324 13300348 -58853534 + (T)n Simple_repeat Simple_repeat 1 24 0 1056 343 62 18 chr20 13301497 13302218 -58851664 + L2 LINE L2 2312 3059 -254 1423 131 4 0 chr20 13302254 13302491 -58851391 - L1MA3 LINE L1 0 6305 6068 727 258 0 7 chr20 13302492 13302681 -58851201 + AluJb SINE Alu 137 312 0 14066 181 28 10 chr20 13302681 13306656 -58847226 - L1MA3 LINE L1 -228 7496 3441 475 174 76 7 chr20 13306655 13306799 -58847083 - L1 LINE L1 -2855 3291 3138 * 505 117 58 19 chr20 13306800 13306903 -58846979 + L1M1 LINE L1 2521 2627 -4938 * 19059 164 37 15 chr20 13306902 13310263 -58843619 - L1MA3 LINE L1 -4116 3449 15 719 152 18 0 chr20 13310386 13310498 -58843384 - LTR9 LTR ERV1 0 612 499 1650 99 0 0 chr20 13310517 13310730 -58843152 - AluSq SINE Alu -100 213 1 2113 162 89 18 chr20 13310736 13311130 -58842752 - LTR9 LTR ERV1 -190 422 1 1163 71 24 30 chr20 13311155 13311324 -58842558 + AluY SINE Alu 1 168 -143 281 232 0 0 chr20 13312033 13312089 -58841793 + L2 LINE L2 3253 3308 -5 555 326 99 51 chr20 13312241 13312633 -58841249 + MLT1K LTR MaLR 16 426 -162 266 327 246 0 chr20 13312809 13313020 -58840862 - L3 LINE CR1 -125 1452 1190 1591 216 65 86 chr20 13313165 13313687 -58840195 - MLT1H LTR MaLR -36 513 3 14377 223 36 29 chr20 13313959 13320676 -58833206 + L1PB4 LINE L1 10 6853 -5 183 80 0 0 chr20 13320914 13320939 -58832943 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 463 223 11 0 chr20 13322099 13322193 -58831689 + MIR3 SINE MIR 104 198 -10 967 288 89 24 chr20 13322565 13322982 -58830900 + LTR16A1 LTR ERVL 1 444 -13 565 252 39 17 chr20 13323881 13324047 -58829835 + MIR SINE MIR 5 169 -66 438 245 93 22 chr20 13326877 13327016 -58826866 - MIR SINE MIR -65 197 49 180 345 35 0 chr20 13327122 13327180 -58826702 - MER5A DNA MER1_type -18 171 112 193 236 0 55 chr20 13327229 13327284 -58826598 - MER5B DNA MER1_type -126 52 1 1259 206 46 31 chr20 13327621 13327946 -58825936 + MLT1H LTR MaLR 40 369 -180 719 162 35 35 chr20 13327940 13328082 -58825800 - MLT1H LTR MaLR -407 142 1 * 225 0 0 0 chr20 13328432 13328457 -58825425 + (A)n Simple_repeat Simple_repeat 1 25 0 378 260 39 0 chr20 13329416 13329543 -58824339 - MER103 DNA DNA -11 155 24 26 30 0 0 chr20 13330202 13330235 -58823647 + AT_rich Low_complexity Low_complexity 1 33 0 23 86 0 0 chr20 13330322 13330380 -58823502 + AT_rich Low_complexity Low_complexity 1 58 0 412 344 106 22 chr20 13330477 13330750 -58823132 - L1ME3 LINE L1 -268 5894 5599 1004 257 126 17 chr20 13330903 13331315 -58822567 + LTR16A1 LTR ERVL 1 457 0 271 253 0 12 chr20 13331327 13331410 -58822472 + T-rich Low_complexity Low_complexity 2 83 0 325 152 0 25 chr20 13332736 13332815 -58821067 + (TA)n Simple_repeat Simple_repeat 2 78 0 1955 89 0 0 chr20 13332860 13333107 -58820775 + AluY SINE Alu 37 283 -28 474 339 61 6 chr20 13334155 13334335 -58819547 + MIR SINE MIR 20 209 -53 195 42 0 0 chr20 13334386 13334410 -58819472 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 265 156 16 16 chr20 13334498 13334562 -58819320 + (TA)n Simple_repeat Simple_repeat 2 65 0 315 193 72 12 chr20 13334562 13334645 -58819237 - L1MC4 LINE L1 -1340 6702 6615 434 378 80 0 chr20 13334722 13334947 -58818935 + MIR SINE MIR 20 262 0 485 305 23 8 chr20 13335651 13335843 -58818039 - MIR SINE MIR -28 234 40 205 306 58 50 chr20 13335909 13336030 -58817852 - MIR SINE MIR -112 150 29 973 303 72 24 chr20 13336251 13336720 -58817162 - MLT1H LTR MaLR 0 549 58 954 267 11 4 chr20 13337584 13337850 -58816032 + L1ME3A LINE L1 5476 5743 -427 681 223 76 5 chr20 13337844 13338041 -58815841 + L1ME3A LINE L1 5945 6155 -15 * 22 56 0 0 chr20 13338764 13338800 -58815082 + AT_rich Low_complexity Low_complexity 1 36 0 481 249 61 57 chr20 13338865 13339102 -58814780 + L1MB8 LINE L1 5677 5921 -257 1701 197 12 14 chr20 13339102 13339447 -58814435 + MLT1A1 LTR MaLR 1 344 -21 236 75 0 25 chr20 13339482 13339522 -58814360 + (TA)n Simple_repeat Simple_repeat 2 40 0 302 237 10 52 chr20 13339605 13339702 -58814180 + L1MC4 LINE L1 6611 6703 -1339 337 184 0 23 chr20 13339712 13339799 -58814083 + (TA)n Simple_repeat Simple_repeat 2 86 0 229 267 0 0 chr20 13339990 13340050 -58813832 + GA-rich Low_complexity Low_complexity 1 60 0 304 292 26 9 chr20 13341906 13342019 -58811863 + GA-rich Low_complexity Low_complexity 2 116 0 800 183 0 0 chr20 13342098 13342235 -58811647 + AluJb SINE Alu 171 307 -5 407 254 7 0 chr20 13342975 13343113 -58810769 + GA-rich Low_complexity Low_complexity 3 141 0 678 249 29 29 chr20 13346065 13346270 -58807612 + L2 LINE L2 3109 3313 0 306 182 0 0 chr20 13347206 13347272 -58806610 + (TA)n Simple_repeat Simple_repeat 2 67 0 23 0 0 0 chr20 13347434 13347457 -58806425 + AT_rich Low_complexity Low_complexity 1 23 0 322 160 13 13 chr20 13347814 13347889 -58805993 + CT-rich Low_complexity Low_complexity 1 75 0 456 175 56 7 chr20 13348240 13348383 -58805499 + L1MA2 LINE L1 3161 3310 -2836 739 203 0 0 chr20 13348385 13348543 -58805339 - L1PB2 LINE L1 -3774 2372 2215 11617 187 31 10 chr20 13348544 13348772 -58805110 + L1PB2 LINE L1 2386 2608 -3543 2488 54 0 0 chr20 13348772 13349069 -58804813 + AluY SINE Alu 1 297 -14 11617 187 31 10 chr20 13349069 13350823 -58803059 + L1PB2 LINE L1 2608 4324 -1827 231 36 0 0 chr20 13350823 13350851 -58803031 + (TC)n Simple_repeat Simple_repeat 2 29 0 369 0 0 0 chr20 13350853 13350894 -58802988 + (CA)n Simple_repeat Simple_repeat 2 42 0 11617 187 31 10 chr20 13350894 13351168 -58802714 + L1PB2 LINE L1 4324 4591 -1560 1882 134 58 30 chr20 13351168 13351533 -58802349 + THE1C LTR MaLR 1 375 0 11617 187 31 10 chr20 13351533 13352015 -58801867 + L1PB2 LINE L1 4591 5062 -1089 216 0 0 0 chr20 13352015 13352039 -58801843 + (TAA)n Simple_repeat Simple_repeat 2 25 0 11617 187 31 10 chr20 13352039 13352624 -58801258 + L1PB2 LINE L1 5062 5633 -518 360 0 0 0 chr20 13352624 13352664 -58801218 + (TA)n Simple_repeat Simple_repeat 1 40 0 291 28 0 0 chr20 13352663 13352699 -58801183 + (CA)n Simple_repeat Simple_repeat 2 37 0 * 11617 187 31 10 chr20 13352664 13353049 -58800833 + L1PB2 LINE L1 5633 6138 -13 6490 170 28 18 chr20 13353059 13355951 -58797931 + L1MA2 LINE L1 3287 6304 0 21 0 0 0 chr20 13355985 13356006 -58797876 + AT_rich Low_complexity Low_complexity 1 21 0 239 288 65 14 chr20 13356341 13356480 -58797402 - HAL1 LINE L1 -921 1586 1441 337 261 70 35 chr20 13356669 13356811 -58797071 + MER5A DNA MER1_type 43 189 0 25 0 0 0 chr20 13357546 13357571 -58796311 + AT_rich Low_complexity Low_complexity 1 25 0 10476 50 10 40 chr20 13357572 13358966 -58794916 - SVA Other Other -14 1372 20 511 168 0 9 chr20 13360140 13360247 -58793635 - MER53 DNA DNA -83 106 1 605 255 19 25 chr20 13361046 13361207 -58792675 + MER63 DNA MER1_type 4 789 -273 196 354 13 0 chr20 13362000 13362079 -58791803 - L3 LINE CR1 -106 1471 1392 2507 176 30 77 chr20 13362289 13362924 -58790958 - LTR9 LTR ERV1 0 612 8 288 130 0 0 chr20 13363844 13363890 -58789992 + (GGAAA)n Simple_repeat Simple_repeat 5 50 0 444 104 0 0 chr20 13364278 13364345 -58789537 + (TA)n Simple_repeat Simple_repeat 2 68 0 249 139 0 0 chr20 13366712 13366755 -58787127 + (CATA)n Simple_repeat Simple_repeat 4 46 0 604 206 30 85 chr20 13367515 13367714 -58786168 - MER5A DNA MER1_type -1 188 1 263 301 6 103 chr20 13368304 13368460 -58785422 - L2 LINE L2 -926 2388 2248 640 316 72 65 chr20 13368522 13368581 -58785301 - L2 LINE L2 -1 3312 3255 1831 222 48 76 chr20 13368581 13369225 -58784657 - MLT1E2 LTR MaLR 0 626 1 640 316 72 65 chr20 13369225 13369276 -58784606 - L2 LINE L2 -58 3255 3206 290 25 0 25 chr20 13369276 13369316 -58784566 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1035 103 76 38 chr20 13369319 13369503 -58784379 - L1PA16 LINE L1 -13 6153 5963 640 316 72 65 chr20 13369503 13369861 -58784021 - L2 LINE L2 -108 3205 2836 494 214 0 0 chr20 13370729 13370827 -58783055 + MER58B DNA MER1_type 161 258 -83 2482 55 3 10 chr20 13370827 13371135 -58782747 + AluY SINE Alu 1 306 -5 867 133 26 26 chr20 13371135 13371286 -58782596 + AluSg/x SINE Alu 134 284 -28 262 224 60 0 chr20 13371289 13371356 -58782526 + MER58B DNA MER1_type 271 341 0 311 330 25 0 chr20 13371385 13371503 -58782379 - L2 LINE L2 -925 2389 2269 2124 108 7 7 chr20 13371988 13372284 -58781598 + AluSq SINE Alu 1 296 -17 438 361 120 37 chr20 13372311 13373120 -58780762 - L2 LINE L2 -1110 2204 1329 29 47 0 0 chr20 13373468 13373511 -58780371 + AT_rich Low_complexity Low_complexity 1 43 0 2364 100 0 3 chr20 13374039 13374349 -58779533 - AluSc SINE Alu 0 309 1 254 299 31 0 chr20 13374351 13374448 -58779434 + HAL1 LINE L1 813 912 -1595 9210 198 19 12 chr20 13374861 13378121 -58775761 + L1PA16 LINE L1 2869 6144 -22 1154 240 79 72 chr20 13378125 13378695 -58775187 + L1ME1 LINE L1 5584 6157 -9 197 353 166 36 chr20 13379011 13379614 -58774268 - L2 LINE L2 -1904 1410 730 2511 55 13 0 chr20 13381380 13381688 -58772194 + AluSx SINE Alu 1 312 0 185 290 16 32 chr20 13382791 13382853 -58771029 + L2 LINE L2 1350 1410 -1904 1628 199 23 35 chr20 13383156 13383803 -58770079 + L1M4 LINE L1 4944 5576 -598 1597 53 3 212 chr20 13386342 13386685 -58767197 - AluY SINE Alu 0 303 28 24 0 0 0 chr20 13386916 13386940 -58766942 + AT_rich Low_complexity Low_complexity 1 24 0 459 0 0 0 chr20 13387961 13388012 -58765870 + (CA)n Simple_repeat Simple_repeat 2 52 0 2190 105 0 0 chr20 13389429 13389743 -58764139 - AluSq SINE Alu 0 314 1 1358 121 0 19 chr20 13389753 13389959 -58763923 - AluSq SINE Alu -21 292 91 419 312 128 0 chr20 13390030 13390171 -58763711 - MIR SINE MIR -43 219 61 228 254 50 72 chr20 13390955 13391136 -58762746 - LTR16A LTR ERVL -120 330 154 413 335 90 32 chr20 13391661 13392037 -58761845 - LTR16B LTR ERVL -10 454 57 931 221 46 79 chr20 13392151 13392330 -58761552 - MLT1A1 LTR MaLR -8 374 191 2193 112 0 29 chr20 13392330 13392642 -58761240 - AluSx SINE Alu -7 305 3 931 221 46 79 chr20 13392642 13392862 -58761020 - MLT1A1 LTR MaLR -191 191 1 1673 185 20 7 chr20 13393025 13393322 -58760560 - AluJb SINE Alu -10 302 2 227 320 31 8 chr20 13393899 13394027 -58759855 - MER110 LTR ERV1 -36 455 325 345 248 93 50 chr20 13394486 13394647 -58759235 - HAL1b LINE L1 -435 913 746 508 263 81 19 chr20 13394717 13394877 -58759005 - MIR SINE MIR 0 262 93 307 343 85 44 chr20 13394976 13395140 -58758742 + L2 LINE L2 2912 3068 -245 2004 125 47 0 chr20 13395140 13395436 -58758446 - AluSx SINE Alu -2 310 1 307 343 85 44 chr20 13395436 13395635 -58758247 + L2 LINE L2 3068 3290 -23 723 245 70 17 chr20 13396725 13397112 -58756770 - LTR16A1 LTR ERVL 0 457 2 1321 214 152 17 chr20 13397666 13398086 -58755796 - MLT1D LTR MaLR -26 479 3 367 390 69 19 chr20 13398108 13398485 -58755397 - L2 LINE L2 -575 2739 2344 183 42 0 0 chr20 13399011 13399035 -58754847 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 241 341 15 0 chr20 13399527 13399659 -58754223 + LTR16A1 LTR ERVL 320 453 -4 2163 157 6 0 chr20 13400372 13400717 -58753165 - MER7A DNA MER2_type 0 346 2 785 194 8 0 chr20 13401007 13401131 -58752751 + MER5A DNA MER1_type 10 134 -55 242 318 16 0 chr20 13401256 13401319 -58752563 - MER5A DNA MER1_type -70 119 56 963 242 83 28 chr20 13401643 13401969 -58751913 - MER2 DNA MER2_type 0 344 1 2766 97 69 14 chr20 13402337 13402772 -58751110 - L1PA11 LINE L1 -1 6173 5715 2294 62 52 0 chr20 13402787 13403075 -58750807 - AluY SINE Alu -8 303 1 696 249 59 39 chr20 13403078 13403425 -58750457 + MLT1F LTR MaLR 38 368 -174 1258 156 25 0 chr20 13404124 13404362 -58749520 + L1M1 LINE L1 5297 5540 -760 * 4756 149 32 8 chr20 13404360 13405255 -58748627 + L1MA6 LINE L1 5384 6300 0 648 311 122 3 chr20 13405533 13405829 -58748053 - MLT1I LTR MaLR -76 333 3 1198 221 13 0 chr20 13407042 13407341 -58746541 - L1P LINE L1 -815 5331 5029 4702 121 29 4 chr20 13407343 13408112 -58745770 + L1PA16 LINE L1 5370 6157 -9 23 0 0 0 chr20 13408112 13408135 -58745747 + AT_rich Low_complexity Low_complexity 1 23 0 859 248 30 55 chr20 13409272 13409635 -58744247 + LTR16A1 LTR ERVL 16 369 -88 6125 148 25 4 chr20 13411145 13413281 -58740601 - L1MA3 LINE L1 0 6305 4123 391 310 51 11 chr20 13413397 13413671 -58740211 - L1ME LINE L1 -558 5612 5328 579 296 72 58 chr20 13413856 13414342 -58739540 - MLT1H LTR MaLR 0 549 57 265 262 82 20 chr20 13414396 13414618 -58739264 - L1ME LINE L1 -1006 5140 4904 491 236 136 27 chr20 13415241 13415461 -58738421 - LTR16B LTR ERVL 0 464 221 * 1897 205 96 22 chr20 13415460 13415919 -58737963 - MLT1D LTR MaLR -12 493 1 217 307 11 0 chr20 13416152 13416240 -58737642 + CT-rich Low_complexity Low_complexity 2 90 0 2158 126 0 3 chr20 13416545 13416847 -58737035 + AluSg1 SINE Alu 1 301 -8 3157 68 21 7 chr20 13417028 13417454 -58736428 + L1PA8 LINE L1 5736 6167 -5 198 0 0 0 chr20 13418591 13418613 -58735269 + (T)n Simple_repeat Simple_repeat 1 22 0 30 27 0 0 chr20 13418966 13419003 -58734879 + AT_rich Low_complexity Low_complexity 1 37 0 573 325 79 0 chr20 13419096 13419336 -58734546 - MIR SINE MIR 0 262 4 467 277 49 22 chr20 13419608 13419792 -58734090 - MER5A DNA MER1_type 0 189 1 260 296 56 9 chr20 13420117 13420225 -58733657 - L2 LINE L2 -8 3305 3193 285 275 38 12 chr20 13420754 13420834 -58733048 + MIR SINE MIR 60 141 -121 1049 259 39 94 chr20 13420917 13421481 -58732401 + MLT1H LTR MaLR 1 533 -16 258 81 0 0 chr20 13421904 13421941 -58731941 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 233 154 39 0 chr20 13422345 13422397 -58731485 - MADE1 DNA Mariner -24 56 3 2571 61 0 0 chr20 13422483 13422794 -58731088 + AluY SINE Alu 1 311 0 308 171 60 19 chr20 13422930 13423038 -58730844 - MLT1J2 LTR MaLR -10 533 431 206 213 0 0 chr20 13424532 13424579 -58729303 + (GGGTG)n Simple_repeat Simple_repeat 5 51 0 198 200 0 20 chr20 13425391 13425441 -58728441 - L2 LINE L2 0 3313 3265 300 245 138 11 chr20 13425659 13425753 -58728129 - L2 LINE L2 -15 3298 3193 696 248 67 21 chr20 13426085 13426323 -58727559 - MLT1J2 LTR MaLR -201 249 1 710 182 122 23 chr20 13426487 13426701 -58727181 - L1MD3 LINE L1 -1 7994 7760 203 152 0 0 chr20 13426719 13426752 -58727130 + (CA)n Simple_repeat Simple_repeat 2 34 0 429 308 115 0 chr20 13426951 13427133 -58726749 - MIR SINE MIR -4 258 56 925 219 11 16 chr20 13427707 13427890 -58725992 + MER5A DNA MER1_type 1 182 -7 223 297 153 17 chr20 13427935 13428053 -58725829 + MIR SINE MIR 7 140 -122 801 219 11 11 chr20 13428723 13428901 -58724981 - LTR16C LTR ERVL 0 491 314 209 83 28 0 chr20 13429177 13429213 -58724669 + (TA)n Simple_repeat Simple_repeat 1 37 0 1771 118 4 0 chr20 13429218 13429480 -58724402 - L1PA13 LINE L1 -19 6144 5882 269 178 56 56 chr20 13429692 13429782 -58724100 + L1MD3 LINE L1 7892 7981 -14 1111 279 59 8 chr20 13429801 13430383 -58723499 + L1ME3A LINE L1 5537 6160 -2 205 292 21 0 chr20 13430405 13430453 -58723429 + L3 LINE CR1 1519 1567 -10 1268 254 91 39 chr20 13431130 13431645 -58722237 + MLT1H LTR MaLR 2 543 -6 208 182 23 0 chr20 13431816 13431860 -58722022 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 1363 282 57 23 chr20 13431930 13432401 -58721481 - LTR16C LTR ERVL 0 491 5 205 211 0 18 chr20 13432603 13432660 -58721222 + (TAAA)n Simple_repeat Simple_repeat 4 59 0 312 330 26 17 chr20 13432946 13433061 -58720821 + L2 LINE L2 3197 3312 -1 243 0 0 0 chr20 13434554 13434581 -58719301 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1646 203 142 72 chr20 13434695 13434804 -58719078 + MLT1E1 LTR MaLR 1 101 -553 447 19 0 0 chr20 13434804 13434856 -58719026 + (TTATA)n Simple_repeat Simple_repeat 5 56 0 1646 203 142 72 chr20 13434856 13435357 -58718525 + MLT1E1 LTR MaLR 101 654 0 3471 267 48 28 chr20 13435429 13437206 -58716676 + L1M4 LINE L1 2517 4329 -1817 3474 261 53 49 chr20 13437213 13438387 -58715495 + L1MB3 LINE L1 11 1188 -5671 1107 165 25 0 chr20 13438393 13438593 -58715289 - MLT2B1 LTR ERVL -315 205 1 9332 227 37 32 chr20 13438671 13440217 -58713665 + L1MB3 LINE L1 2031 3568 -3423 2295 98 38 12 chr20 13440217 13440563 -58713319 - THE1A LTR MaLR 0 355 1 11748 92 5 2 chr20 13440563 13442139 -58711743 - THE1A-int LTR MaLR 0 1580 1 2533 79 35 0 chr20 13442139 13442482 -58711400 - THE1A LTR MaLR 0 355 1 9332 227 37 32 chr20 13442482 13442633 -58711249 + L1MB3 LINE L1 3568 3717 -3274 3026 121 58 10 chr20 13442633 13443114 -58710768 + MER84 LTR ERV1 1 504 -3 9332 227 37 32 chr20 13443114 13443374 -58710508 + L1MB3 LINE L1 3717 3974 -3017 1999 79 8 0 chr20 13443374 13443628 -58710254 - AluSq SINE Alu -17 296 41 9332 227 37 32 chr20 13443628 13445779 -58708103 + L1MB3 LINE L1 3974 6262 -729 1674 240 15 30 chr20 13445861 13446327 -58707555 - MER74B LTR ERVL -88 534 76 2874 182 47 16 chr20 13446343 13446771 -58707111 + L1MB3 LINE L1 6270 6730 -264 225 0 0 0 chr20 13446771 13446796 -58707086 + (CA)n Simple_repeat Simple_repeat 2 26 0 2874 182 47 16 chr20 13446796 13447070 -58706812 + L1MB3 LINE L1 6730 6994 0 205 308 0 0 chr20 13447091 13447143 -58706739 - MIR SINE MIR -206 56 5 708 217 18 49 chr20 13448067 13448293 -58705589 + MLT2C1 LTR ERVL 10 228 -169 245 352 28 0 chr20 13448640 13448748 -58705134 - LTR67 LTR ERVL -401 156 46 2347 84 0 0 chr20 13448788 13449073 -58704809 + AluSg SINE Alu 1 285 -25 585 308 38 24 chr20 13449331 13449623 -58704259 - MLT1I LTR MaLR 0 409 114 1497 68 155 14 chr20 13451078 13451285 -58702597 + AluY SINE Alu 69 304 -7 3595 99 41 2 chr20 13452357 13452890 -58700992 + MER41A LTR ERV1 1 554 0 2019 108 61 10 chr20 13455071 13455368 -58698514 - AluSx SINE Alu 0 312 1 204 213 43 0 chr20 13455542 13455589 -58698293 + T-rich Low_complexity Low_complexity 2 50 0 237 132 0 0 chr20 13455592 13455630 -58698252 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 306 223 31 46 chr20 13456184 13456314 -58697568 + (TATATG)n Simple_repeat Simple_repeat 2 129 0 2417 66 0 7 chr20 13456894 13457197 -58696685 + AluY SINE Alu 1 301 -10 315 214 0 0 chr20 13457355 13457425 -58696457 + CT-rich Low_complexity Low_complexity 3 72 0 726 283 150 25 chr20 13457639 13458934 -58694948 + L1MC/D LINE L1 3797 5253 -893 505 234 16 0 chr20 13458966 13459090 -58694792 - MLT1D LTR MaLR -6 499 374 4156 147 16 42 chr20 13459091 13459926 -58693956 + L1MA7 LINE L1 5456 6268 -23 818 284 68 11 chr20 13459940 13460204 -58693678 - MLT1E2 LTR MaLR -143 483 205 225 0 0 0 chr20 13460209 13460234 -58693648 + (T)n Simple_repeat Simple_repeat 1 25 0 673 206 0 0 chr20 13460680 13460816 -58693066 - MLT1E2 LTR MaLR -315 190 55 263 303 76 42 chr20 13461022 13461286 -58692596 + L1MC/D LINE L1 5482 5754 -2054 757 277 136 25 chr20 13462605 13462622 -58691260 + LTR16C LTR ERVL 97 111 -380 213 65 0 0 chr20 13462622 13462653 -58691229 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 757 277 136 25 chr20 13462653 13462989 -58690893 + LTR16C LTR ERVL 111 489 -2 2782 32 0 0 chr20 13463492 13463808 -58690074 - AluYb8 SINE Alu -2 316 1 224 394 30 8 chr20 13464003 13464135 -58689747 + MER5A DNA MER1_type 54 188 -1 222 180 53 7 chr20 13466707 13466857 -58687025 + (TA)n Simple_repeat Simple_repeat 2 158 0 207 0 0 0 chr20 13466857 13466880 -58687002 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 104 0 0 chr20 13468141 13468218 -58685664 + AT_rich Low_complexity Low_complexity 1 77 0 1528 209 212 9 chr20 13469816 13470265 -58683617 - MLT1F LTR MaLR 0 542 3 422 208 16 148 chr20 13470927 13471110 -58682772 + MER63 DNA MER1_type 1 785 -277 638 251 99 0 chr20 13471223 13471394 -58682488 - MER58A DNA MER1_type -1 223 36 695 261 52 93 chr20 13471440 13471904 -58681978 - LTR16A1 LTR ERVL -12 445 1 878 204 49 0 chr20 13471909 13472071 -58681811 - MER5A DNA MER1_type -4 185 16 1479 221 16 3 chr20 13522269 13522572 -58631310 - Tigger7 DNA MER2_type -2180 307 1 1312 235 28 89 chr20 13522572 13522964 -58630918 - MER31B-int LTR ERV1 -4554 382 15 1670 189 102 50 chr20 13523014 13523456 -58630426 - MER31B LTR ERV1 0 543 1 632 233 70 54 chr20 13523662 13523920 -58629962 + LTR37A LTR ERV1 43 304 -122 2195 116 7 0 chr20 13523975 13524267 -58629615 - AluSx SINE Alu -18 294 1 2393 71 3 0 chr20 13524372 13524667 -58629215 - AluY SINE Alu -15 296 1 364 270 33 46 chr20 13524677 13524829 -58629053 - MIR SINE MIR -43 219 70 1533 124 62 48 chr20 13524989 13525280 -58628602 + Tigger3(Golem) DNA MER2_type 2734 3028 -1 963 223 42 0 chr20 13526849 13527042 -58626840 + MIR SINE MIR 41 241 -21 2239 92 3 7 chr20 13527065 13527359 -58626523 - AluSx SINE Alu -17 295 3 899 179 67 40 chr20 13527414 13527638 -58626244 - AluJo SINE Alu -81 231 2 4035 121 47 0 chr20 13528467 13529102 -58624780 - L1P LINE L1 -1483 4663 3999 21 0 0 0 chr20 13529111 13529132 -58624750 + AT_rich Low_complexity Low_complexity 1 21 0 205 215 31 31 chr20 13529476 13529541 -58624341 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 209 274 20 0 chr20 13529678 13529729 -58624153 + GA-rich Low_complexity Low_complexity 5 56 0 894 201 73 19 chr20 13529756 13530032 -58623850 + L1MC5 LINE L1 6959 7247 -728 1120 211 41 55 chr20 13530164 13530604 -58623278 + L1MC5 LINE L1 7268 7701 -260 390 246 108 0 chr20 13531342 13531472 -58622410 - L1MD2 LINE L1 -2 6357 6214 973 151 104 0 chr20 13531486 13531678 -58622204 - L1PA16 LINE L1 -17 6149 5938 618 200 5 116 chr20 13531672 13531887 -58621995 - L1MD2 LINE L1 -131 6228 6038 * 2136 101 3 3 chr20 13531887 13532175 -58621707 + AluSg SINE Alu 1 288 -22 241 287 30 20 chr20 13532328 13532429 -58621453 - MER5A DNA MER1_type 0 189 88 25 51 0 0 chr20 13532762 13532801 -58621081 + AT_rich Low_complexity Low_complexity 1 39 0 2414 82 77 14 chr20 13533139 13533503 -58620379 - L1PA11 LINE L1 -304 5870 5484 1055 178 6 0 chr20 13535645 13535819 -58618063 + AluJo SINE Alu 1 175 -137 983 188 6 0 chr20 13535974 13536155 -58617727 + AluJb SINE Alu 88 269 -43 265 258 141 55 chr20 13536405 13536533 -58617349 + MER5A DNA MER1_type 47 185 -4 197 328 0 0 chr20 13536507 13536568 -58617314 - L2 LINE L2 -7 3265 3205 * 2504 54 0 0 chr20 13536694 13536989 -58616893 - AluY SINE Alu -16 295 1 240 309 12 0 chr20 13537573 13537657 -58616225 + L1M4 LINE L1 4080 4164 -1982 344 308 119 63 chr20 13538102 13538451 -58615431 + L1MEd LINE L1 841 1178 -1329 377 314 174 4 chr20 13538510 13538746 -58615136 + L1MC4a LINE L1 5787 6062 -1746 613 283 40 5 chr20 13540841 13541064 -58612818 - L1ME LINE L1 -299 5822 5592 262 254 0 16 chr20 13541070 13541133 -58612749 + (CA)n Simple_repeat Simple_repeat 2 63 0 310 296 148 19 chr20 13541133 13541295 -58612587 - L1ME LINE L1 -531 5590 5408 25 0 0 0 chr20 13542142 13542167 -58611715 + AT_rich Low_complexity Low_complexity 1 25 0 18622 149 68 15 chr20 13542172 13545995 -58607887 + L1M1 LINE L1 24 4055 -3510 304 285 252 33 chr20 13546506 13546748 -58607134 + HAL1 LINE L1 826 1120 -1387 2483 187 74 135 chr20 13546887 13547035 -58606847 - MER21A LTR ERV1 -6 925 770 1876 144 20 23 chr20 13547035 13547334 -58606548 - AluSx SINE Alu -14 298 1 2483 187 74 135 chr20 13547334 13547453 -58606429 - MER21A LTR ERV1 -161 770 645 1960 163 0 3 chr20 13547453 13547754 -58606128 - AluJo SINE Alu -12 300 1 2483 187 74 135 chr20 13547754 13548458 -58605424 - MER21A LTR ERV1 -286 645 12 3608 98 159 111 chr20 13548553 13549883 -58603999 - pTR5 LTR ERV1 0 2438 742 914 277 73 52 chr20 13549887 13550518 -58603364 + L1MEd LINE L1 415 1058 -5061 28 0 0 0 chr20 13551226 13551254 -58602628 + AT_rich Low_complexity Low_complexity 1 28 0 220 315 11 11 chr20 13553053 13553142 -58600740 + (CG)n Simple_repeat Simple_repeat 1 89 0 443 293 38 25 chr20 13553644 13553801 -58600081 + L2 LINE L2 223 381 -2933 576 322 150 10 chr20 13554285 13554599 -58599283 + L2 LINE L2 2955 3312 -1 592 286 148 24 chr20 13554610 13554942 -58598940 + L2 LINE L2 2939 3311 -2 2516 62 0 16 chr20 13555314 13555645 -58598237 + AluSc SINE Alu 1 309 0 3243 178 18 26 chr20 13555653 13555776 -58598106 + L1MB5 LINE L1 5490 5613 -561 457 56 11 124 chr20 13555776 13555826 -58598056 - MADE1 DNA Mariner 0 80 43 2316 71 3 14 chr20 13555826 13556123 -58597759 + AluY SINE Alu 1 294 -17 457 56 11 124 chr20 13556123 13556161 -58597721 - MADE1 DNA Mariner -37 43 2 3243 178 18 26 chr20 13556161 13556722 -58597160 + L1MB5 LINE L1 5613 6168 -6 602 157 10 0 chr20 13556726 13556828 -58597054 + L1M4 LINE L1 5550 5652 -526 1210 147 118 0 chr20 13557260 13557471 -58596411 + MER46A DNA MER2_type 1 236 0 239 231 165 74 chr20 13557536 13557657 -58596225 - MIR3 SINE MIR -71 137 6 1709 161 67 85 chr20 13559494 13559930 -58593952 + MSTA LTR MaLR 1 428 0 531 234 133 37 chr20 13560149 13560337 -58593545 - MIR SINE MIR -12 250 45 718 289 118 22 chr20 13560678 13561180 -58592702 + Charlie7 DNA MER1_type 12 561 -2051 1179 78 0 0 chr20 13561453 13561595 -58592287 - AluSc SINE Alu -18 291 150 209 176 0 0 chr20 13561752 13561786 -58592096 + MIR SINE MIR 95 128 -134 * 489 242 81 34 chr20 13561784 13561933 -58591949 - MIR SINE MIR -91 171 16 450 245 29 0 chr20 13561959 13562061 -58591821 + MIR SINE MIR 158 262 0 570 211 0 0 chr20 13562504 13562627 -58591255 - AluSg/x SINE Alu -11 301 179 2516 153 52 74 chr20 13562815 13563307 -58590575 + LTR8A LTR ERV1 83 558 -169 1972 129 7 14 chr20 13563307 13563602 -58590280 + AluY SINE Alu 1 293 -18 2516 153 52 74 chr20 13563602 13563769 -58590113 + LTR8A LTR ERV1 558 727 0 778 168 121 39 chr20 13563856 13564088 -58589794 + LTR45B LTR ERV1 225 475 -14 355 184 143 7 chr20 13564159 13564306 -58589576 + L1M4c LINE L1 967 1133 -5251 5217 223 88 10 chr20 13564318 13566029 -58587853 + L1 LINE L1 2816 4660 -1486 1880 158 20 7 chr20 13566237 13566535 -58587347 + AluSx SINE Alu 1 302 -10 367 247 0 34 chr20 13567341 13567430 -58586452 + MIR SINE MIR 56 141 -121 182 340 125 43 chr20 13567900 13568291 -58585591 - L2 LINE L2 -339 2975 2553 295 350 43 21 chr20 13568303 13568489 -58585393 - L2 LINE L2 -1285 2029 1840 216 292 99 109 chr20 13568775 13568967 -58584915 + L2 LINE L2 2632 2821 -493 219 346 74 31 chr20 13570845 13571007 -58582875 - L2 LINE L2 -5 3308 3140 264 329 102 0 chr20 13571058 13571195 -58582687 - L2 LINE L2 -260 3012 2862 219 267 107 61 chr20 13571249 13571380 -58582502 - L2 LINE L2 -722 2592 2456 597 348 182 15 chr20 13572026 13572067 -58581815 + L2 LINE L2 1868 1901 -1413 1243 119 228 36 chr20 13572067 13572333 -58581549 + MER46B DNA MER2_type 1 208 -2523 1931 152 3 0 chr20 13572333 13572622 -58581260 - AluJb SINE Alu -22 290 1 1243 119 228 36 chr20 13572622 13572658 -58581224 + MER46B DNA MER2_type 208 236 0 597 348 182 15 chr20 13572658 13573302 -58580580 + L2 LINE L2 1901 2668 -646 821 251 76 5 chr20 13574168 13574379 -58579503 - MIR SINE MIR -11 251 26 375 240 0 0 chr20 13574531 13574606 -58579276 + MIR SINE MIR 67 141 -121 320 302 126 5 chr20 13575136 13575351 -58578531 + MER112 DNA MER1_type 8 248 -12 2358 82 0 3 chr20 13575401 13575706 -58578176 - AluY SINE Alu -7 304 1 2400 92 3 0 chr20 13575709 13576015 -58577867 - AluSc SINE Alu -1 308 2 216 0 0 0 chr20 13576367 13576391 -58577491 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 602 281 138 0 chr20 13577441 13577644 -58576238 - MIR SINE MIR -21 241 11 442 308 117 29 chr20 13577688 13578236 -58575646 + L1ME LINE L1 5272 5855 -266 220 260 315 22 chr20 13578350 13578531 -58575351 + MIR SINE MIR 15 248 -14 192 77 0 0 chr20 13579585 13579611 -58574271 + (GGGA)n Simple_repeat Simple_repeat 2 27 0 1947 139 0 17 chr20 13579655 13579957 -58573925 + AluSx SINE Alu 13 309 -3 1411 204 4 22 chr20 13580015 13580284 -58573598 + AluJo SINE Alu 1 264 -48 385 329 84 32 chr20 13580579 13580828 -58573054 - L3 LINE CR1 -12 1565 1304 1276 234 67 46 chr20 13581031 13581492 -58572390 + HsTC2a DNA Tc2 11 481 -263 25679 104 24 29 chr20 13581494 13587963 -58565919 + L1PA11 LINE L1 9 6475 -14 544 246 15 8 chr20 13588099 13588233 -58565649 - MER115 DNA AcHobo -107 586 452 180 0 0 0 chr20 13588237 13588257 -58565625 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 2192 69 4 7 chr20 13588330 13588606 -58565276 - AluSp SINE Alu -8 305 31 2335 82 0 16 chr20 13589560 13589863 -58564019 + AluSc SINE Alu 1 298 -11 1270 138 13 5 chr20 13589863 13590087 -58563795 - Tigger1 DNA MER2_type -2192 226 1 2135 137 0 3 chr20 13590159 13590509 -58563373 - AluSx SINE Alu 0 349 1 355 224 51 31 chr20 13590581 13590679 -58563203 + MIR SINE MIR 97 196 -66 2301 110 0 3 chr20 13590769 13591069 -58562813 - AluSg SINE Alu -11 299 1 23 33 0 0 chr20 13591628 13591658 -58562224 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr20 13591822 13591850 -58562032 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr20 13592290 13592315 -58561567 + AT_rich Low_complexity Low_complexity 1 25 0 436 213 0 0 chr20 13592497 13592591 -58561291 - MER92B LTR ERV1 0 636 543 1056 215 124 43 chr20 13592610 13592982 -58560900 - MER92B LTR ERV1 -233 403 2 2088 124 3 10 chr20 13593166 13593464 -58560418 + AluSx SINE Alu 1 296 -16 310 0 0 0 chr20 13593582 13593620 -58560262 - L1P LINE L1 -1823 4323 4286 232 132 0 57 chr20 13593620 13593673 -58560209 + Charlie5 DNA MER1_type 2514 2563 -49 2074 114 6 25 chr20 13593869 13594185 -58559697 + AluSg SINE Alu 1 310 0 1863 158 40 109 chr20 13594519 13594968 -58558914 - MER47B DNA MER2_type 0 418 1 21 0 0 0 chr20 13595157 13595178 -58558704 + AT_rich Low_complexity Low_complexity 1 21 0 1515 229 29 53 chr20 13595242 13595696 -58558186 + LTR47B LTR ERVL 1 443 0 500 308 107 48 chr20 13596243 13596597 -58557285 + L2 LINE L2 2381 2755 -559 989 199 112 64 chr20 13596607 13596964 -58556918 + MLT1A2 LTR MaLR 1 374 0 2319 112 0 0 chr20 13597116 13597411 -58556471 - AluSq SINE Alu -18 295 1 208 315 18 45 chr20 13597460 13597571 -58556311 + L2 LINE L2 2988 3095 -218 1813 156 0 48 chr20 13597608 13597922 -58555960 - AluSx SINE Alu -13 299 1 1332 203 103 32 chr20 13597926 13598296 -58555586 + MLT1D LTR MaLR 108 503 -2 473 167 0 0 chr20 13599737 13599809 -58554073 + tRNA-Glu-GAG tRNA tRNA 1 72 -3 1783 231 52 6 chr20 13599831 13600350 -58553532 + L1ME3A LINE L1 3802 4344 -1802 227 79 26 0 chr20 13601385 13601423 -58552459 + (TA)n Simple_repeat Simple_repeat 1 39 0 24 32 0 0 chr20 13601426 13601457 -58552425 + AT_rich Low_complexity Low_complexity 1 31 0 1255 250 91 48 chr20 13602371 13602873 -58551009 + L1ME3A LINE L1 5523 6057 -113 2405 86 0 0 chr20 13602873 13603165 -58550717 - AluSg SINE Alu -18 292 1 1255 250 91 48 chr20 13603165 13603281 -58550601 + L1ME3A LINE L1 6057 6167 -3 593 278 23 77 chr20 13604028 13604143 -58549739 - MIR SINE MIR -8 254 134 1932 128 52 6 chr20 13604143 13604488 -58549394 + MER46B DNA MER2_type 1 236 0 593 278 23 77 chr20 13604488 13604631 -58549251 - MIR SINE MIR -128 134 10 21 0 0 0 chr20 13605229 13605250 -58548632 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr20 13605608 13605637 -58548245 + AT_rich Low_complexity Low_complexity 1 29 0 441 184 265 0 chr20 13606424 13606560 -58547322 - MER5B DNA MER1_type 0 178 7 378 281 100 97 chr20 13606872 13607653 -58546229 + L1M2 LINE L1 441 1289 -5560 230 308 169 30 chr20 13608372 13608609 -58545273 + L2 LINE L2 2025 2294 -1020 293 319 168 0 chr20 13608768 13608881 -58545001 - MIR3 SINE MIR -37 171 40 2141 93 4 0 chr20 13609460 13609765 -58544117 + AluSg SINE Alu 3 308 0 766 149 0 57 chr20 13609772 13609913 -58543969 + FLAM_C SINE Alu 11 143 0 220 333 73 49 chr20 13609994 13610117 -58543765 + L2 LINE L2 3142 3267 -5 21 57 0 0 chr20 13610193 13610228 -58543654 + AT_rich Low_complexity Low_complexity 1 35 0 2079 120 38 0 chr20 13610992 13611284 -58542598 + AluSx SINE Alu 3 305 -7 199 270 112 22 chr20 13611795 13611884 -58541998 - MIR SINE MIR -30 232 136 2544 269 91 63 chr20 13612016 13612478 -58541404 - L2 LINE L2 0 3313 2866 2042 131 3 22 chr20 13612478 13612792 -58541090 - AluSx SINE Alu -4 308 1 2544 269 91 63 chr20 13612792 13613220 -58540662 - L2 LINE L2 -447 2866 2452 394 46 215 0 chr20 13613220 13613285 -58540597 - MADE1 DNA Mariner -1 79 1 2544 269 91 63 chr20 13613285 13613706 -58540176 - L2 LINE L2 -861 2452 1950 665 268 56 4 chr20 13614602 13614833 -58539049 + HAL1 LINE L1 3 245 -2262 321 235 86 74 chr20 13614856 13615018 -58538864 + HAL1 LINE L1 311 474 -2033 255 220 98 61 chr20 13615194 13615326 -58538556 + HAL1 LINE L1 2354 2490 -17 302 304 48 68 chr20 13616784 13616991 -58536891 + L2 LINE L2 1868 2070 -1244 21 36 0 0 chr20 13617508 13617536 -58536346 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 13617688 13617716 -58536166 + AT_rich Low_complexity Low_complexity 1 28 0 204 219 0 0 chr20 13618481 13618522 -58535360 + A-rich Low_complexity Low_complexity 5 45 0 24 32 0 0 chr20 13619146 13619177 -58534705 + AT_rich Low_complexity Low_complexity 1 31 0 2068 145 3 10 chr20 13619911 13620222 -58533660 - AluSg SINE Alu -1 309 1 760 201 121 69 chr20 13620369 13620845 -58533037 - MLT1H LTR MaLR -4 545 5 291 216 171 11 chr20 13621805 13621893 -58531989 + MIR SINE MIR 13 114 -148 276 289 0 25 chr20 13622072 13622193 -58531689 + HAL1 LINE L1 1632 1749 -758 329 273 79 68 chr20 13622502 13622961 -58530921 + L1M3 LINE L1 4588 5001 -1167 1915 140 0 34 chr20 13622961 13623280 -58530602 + AluSx SINE Alu 1 309 0 329 273 79 68 chr20 13623280 13623732 -58530150 + L1M3 LINE L1 5001 5447 -721 28 71 0 0 chr20 13623782 13623838 -58530044 + AT_rich Low_complexity Low_complexity 1 56 0 2156 126 3 0 chr20 13623849 13624142 -58529740 - AluSq SINE Alu -19 294 1 226 323 25 35 chr20 13624161 13624362 -58529520 + L1MC/D LINE L1 5526 5724 -2084 673 206 0 0 chr20 13624622 13624758 -58529124 + MLT1E2 LTR MaLR 55 190 -315 225 0 0 0 chr20 13625204 13625229 -58528653 + (A)n Simple_repeat Simple_repeat 1 25 0 818 284 68 11 chr20 13625234 13625498 -58528384 + MLT1E2 LTR MaLR 205 483 -143 4156 147 16 42 chr20 13625512 13626347 -58527535 - L1MA7 LINE L1 -23 6268 5456 505 234 16 0 chr20 13626348 13626472 -58527410 + MLT1D LTR MaLR 374 499 -6 726 283 150 25 chr20 13626504 13627799 -58526083 - L1M4 LINE L1 -893 5253 3797 315 214 0 0 chr20 13628013 13628083 -58525799 + GA-rich Low_complexity Low_complexity 3 72 0 2426 66 0 7 chr20 13628241 13628545 -58525337 - AluY SINE Alu -9 302 1 306 223 31 46 chr20 13629125 13629255 -58524627 + (CATATA)n Simple_repeat Simple_repeat 2 129 0 237 132 0 0 chr20 13629809 13629847 -58524035 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 204 213 43 0 chr20 13629850 13629897 -58523985 + A-rich Low_complexity Low_complexity 2 50 0 2019 108 61 10 chr20 13630071 13630368 -58523514 + AluSx SINE Alu 1 312 0 3595 99 41 2 chr20 13632549 13633082 -58520800 - MER41A LTR ERV1 0 554 1 1497 68 155 14 chr20 13634154 13634361 -58519521 - AluY SINE Alu -7 304 69 585 308 38 24 chr20 13635816 13636108 -58517774 + MLT1I LTR MaLR 114 409 0 2347 84 0 0 chr20 13636366 13636651 -58517231 - AluSg SINE Alu -25 285 1 245 352 28 0 chr20 13636691 13636799 -58517083 + LTR67 LTR ERVL 46 156 -401 708 217 18 49 chr20 13637146 13637372 -58516510 - MLT2C1 LTR ERVL -169 228 10 263 303 76 42 chr20 13638084 13638348 -58515534 + L1MC/D LINE L1 5482 5754 -2054 757 277 136 25 chr20 13639667 13639684 -58514198 + LTR16C LTR ERVL 97 111 -380 213 65 0 0 chr20 13639684 13639715 -58514167 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 757 277 136 25 chr20 13639715 13640051 -58513831 + LTR16C LTR ERVL 111 489 -2 2782 32 0 0 chr20 13640554 13640870 -58513012 - AluYb8 SINE Alu -2 316 1 224 394 30 8 chr20 13641065 13641197 -58512685 + MER5A DNA MER1_type 54 188 -1 222 180 53 7 chr20 13643769 13643919 -58509963 + (TA)n Simple_repeat Simple_repeat 2 158 0 207 0 0 0 chr20 13643919 13643942 -58509940 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 104 0 0 chr20 13645203 13645280 -58508602 + AT_rich Low_complexity Low_complexity 1 77 0 1528 209 212 9 chr20 13646878 13647327 -58506555 - MLT1F LTR MaLR 0 542 3 422 208 16 148 chr20 13647989 13648172 -58505710 + MER63 DNA MER1_type 1 785 -277 638 251 99 0 chr20 13648285 13648456 -58505426 - MER58A DNA MER1_type -1 223 36 695 261 52 93 chr20 13648502 13648966 -58504916 - LTR16A1 LTR ERVL -12 445 1 878 204 49 0 chr20 13648971 13649133 -58504749 - MER5A DNA MER1_type -4 185 16 1410 67 6 0 chr20 13650409 13650587 -58503295 + AluY SINE Alu 120 298 -13 1166 160 58 48 chr20 13650930 13651242 -58502640 - MER33 DNA MER1_type -9 315 1 209 364 68 0 chr20 13651243 13651331 -58502551 - MIR3 SINE MIR -49 159 66 860 267 5 24 chr20 13651468 13651674 -58502208 + MIR SINE MIR 3 204 -58 315 0 0 0 chr20 13652265 13652300 -58501582 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 441 0 0 0 chr20 13652299 13652348 -58501534 + (TG)n Simple_repeat Simple_repeat 2 50 0 265 333 24 0 chr20 13653517 13653601 -58500281 + MIR SINE MIR 70 156 -52 303 260 0 0 chr20 13653853 13653926 -58499956 - MIR SINE MIR -19 243 171 262 364 50 0 chr20 13653962 13654102 -58499780 - LTR16C LTR ERVL 0 491 345 41202 29 21 1 chr20 13654591 13660616 -58493266 + L1HS LINE L1 5 6153 -2 201 162 0 0 chr20 13660617 13660654 -58493228 + A-rich Low_complexity Low_complexity 1 37 0 6195 133 12 9 chr20 13660656 13661846 -58492036 + L1MA4A LINE L1 5105 6301 -2 2177 142 0 0 chr20 13661846 13662155 -58491727 + AluSx SINE Alu 1 309 -3 261 366 98 6 chr20 13662816 13662980 -58490902 - MER5A DNA MER1_type -1 188 10 658 159 15 8 chr20 13663659 13663791 -58490091 + L1MB4 LINE L1 6042 6174 -6 308 263 42 55 chr20 13664775 13664949 -58488933 + MLT1I LTR MaLR 99 212 -197 313 289 53 109 chr20 13665086 13665233 -58488649 - L1MEc LINE L1 -3927 2383 2229 926 202 5 5 chr20 13665233 13665421 -58488461 - MER5A DNA MER1_type 0 189 2 313 289 53 109 chr20 13665421 13665630 -58488252 - L1MEc LINE L1 -4081 2229 2047 285 258 97 61 chr20 13666253 13666614 -58487268 - L1MEc LINE L1 -5061 1058 685 1565 199 28 20 chr20 13666621 13666978 -58486904 + MLT1A1 LTR MaLR 5 364 -1 446 226 10 0 chr20 13667045 13667147 -58486735 + MER5A DNA MER1_type 9 111 -78 289 309 32 82 chr20 13667266 13667645 -58486237 - L1MEc LINE L1 -5552 567 208 409 284 128 20 chr20 13667996 13668200 -58485682 - MIR SINE MIR -35 227 2 4064 221 71 59 chr20 13668229 13669571 -58484311 + MER52A LTR ERV1 1 1358 -397 325 284 9 9 chr20 13670343 13670452 -58483430 + GA-rich Low_complexity Low_complexity 2 110 0 21 71 0 0 chr20 13671177 13671219 -58482663 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr20 13671219 13671239 -58482643 + (TG)n Simple_repeat Simple_repeat 2 21 0 * 483 100 0 0 chr20 13671238 13671308 -58482574 + (TA)n Simple_repeat Simple_repeat 1 70 0 240 250 58 0 chr20 13671367 13671523 -58482359 + (TA)n Simple_repeat Simple_repeat 2 166 0 30 123 0 0 chr20 13671523 13671735 -58482147 + AT_rich Low_complexity Low_complexity 1 212 0 21 36 0 0 chr20 13671882 13671910 -58481972 + AT_rich Low_complexity Low_complexity 1 28 0 687 252 78 88 chr20 13672065 13672599 -58481283 - MER34B LTR ERV1 -2 540 1 867 291 89 0 chr20 13672818 13673144 -58480738 + MLT1H LTR MaLR 1 355 -194 679 209 162 0 chr20 13673918 13674066 -58479816 - MER5A DNA MER1_type -8 181 10 496 203 203 38 chr20 13674671 13674829 -58479053 + MER5A DNA MER1_type 5 188 -1 207 235 10 92 chr20 13674962 13675060 -58478822 + MIR SINE MIR 142 231 -31 335 225 0 0 chr20 13676118 13676198 -58477684 + MER116 DNA Mariner 1 80 0 648 208 168 12 chr20 13677783 13678033 -58475849 + MER5C DNA MER1_type 1 289 -35 212 289 108 24 chr20 13678155 13678238 -58475644 - L3b LINE CR1 -115 1468 1379 4275 179 32 15 chr20 13678582 13680154 -58473728 + L1MA9 LINE L1 4382 6170 -142 342 0 0 0 chr20 13680154 13680192 -58473690 + (CA)n Simple_repeat Simple_repeat 1 38 0 4275 179 32 15 chr20 13680192 13680299 -58473583 + L1MA9 LINE L1 6170 6274 -38 24 0 0 0 chr20 13680299 13680323 -58473559 + AT_rich Low_complexity Low_complexity 1 24 0 39 50 0 0 chr20 13681178 13681238 -58472644 + AT_rich Low_complexity Low_complexity 1 60 0 323 302 99 40 chr20 13681474 13681676 -58472206 - L1ME3A LINE L1 -220 6019 5806 1584 259 159 6 chr20 13681676 13682217 -58471665 + MLT1E3 LTR MaLR 1 624 0 618 238 49 74 chr20 13682244 13682681 -58471201 - L1ME3A LINE L1 -457 5782 5346 622 276 48 81 chr20 13682831 13683160 -58470722 - L1ME3A LINE L1 -1465 4750 4412 5978 109 37 47 chr20 13683160 13684285 -58469597 - L1PA12 LINE L1 0 6168 5033 2054 119 3 7 chr20 13684285 13684578 -58469304 - AluSx SINE Alu -20 292 1 5978 109 37 47 chr20 13684578 13684634 -58469248 - L1PA12 LINE L1 -1135 5033 4993 1832 156 49 0 chr20 13684634 13684922 -58468960 - AluJb SINE Alu -10 302 1 5978 109 37 47 chr20 13684922 13684992 -58468890 - L1PA12 LINE L1 -1175 4993 4924 622 276 48 81 chr20 13684992 13685325 -58468557 - L1ME3A LINE L1 -1803 4412 4110 1423 253 0 17 chr20 13685325 13685681 -58468201 + MLT2D LTR ERVL 3 352 -62 307 71 0 0 chr20 13685748 13685790 -58468092 + MLT2D LTR ERVL 479 520 0 282 265 81 96 chr20 13685832 13686251 -58467631 - L1ME3A LINE L1 -2145 4070 3658 491 251 98 81 chr20 13686596 13686903 -58466979 - L1ME3A LINE L1 -2947 3268 2957 22 0 0 0 chr20 13688103 13688125 -58465757 + AT_rich Low_complexity Low_complexity 1 22 0 459 333 43 0 chr20 13688796 13688934 -58464948 + L2 LINE L2 3112 3255 -17 2525 63 0 13 chr20 13689426 13689741 -58464141 - AluY SINE Alu 0 311 1 663 306 80 45 chr20 13690513 13691141 -58462741 - L1MEc LINE L1 -3526 2689 2074 1352 239 5 51 chr20 13692678 13693050 -58460832 + MLT2C1 LTR ERVL 2 355 -42 243 61 0 0 chr20 13693050 13693083 -58460799 + (TG)n Simple_repeat Simple_repeat 2 34 0 1352 239 5 51 chr20 13693083 13693125 -58460757 + MLT2C1 LTR ERVL 355 397 0 1870 287 30 6 chr20 13693125 13694156 -58459726 + ERVL-C1 LTR ERVL 1 1132 -4632 813 263 33 8 chr20 13694154 13694397 -58459485 + ERVL-C1 LTR ERVL 1637 1885 -3879 * 5308 213 66 18 chr20 13694402 13695705 -58458177 + ERVL-C1 LTR ERVL 4391 5756 -8 425 167 0 0 chr20 13695705 13695777 -58458105 + MLT2C1 LTR ERVL 1 72 -325 216 322 260 14 chr20 13695900 13696046 -58457836 - MIR SINE MIR -49 213 32 32 26 0 0 chr20 13696238 13696277 -58457605 + AT_rich Low_complexity Low_complexity 1 39 0 31 26 0 0 chr20 13696406 13696444 -58457438 + AT_rich Low_complexity Low_complexity 1 38 0 193 378 22 11 chr20 13696666 13696756 -58457126 + L2 LINE L2 3190 3280 -33 214 286 48 0 chr20 13698323 13698386 -58455496 + MIR3 SINE MIR 95 160 -48 216 0 0 0 chr20 13699137 13699161 -58454721 + (T)n Simple_repeat Simple_repeat 1 24 0 856 281 89 36 chr20 13699709 13700125 -58453757 + LTR16A1 LTR ERVL 5 442 -15 705 116 174 29 chr20 13700352 13700490 -58453392 - FRAM SINE Alu -13 163 6 255 305 143 22 chr20 13700497 13700720 -58453162 - MIR SINE MIR -11 251 2 675 271 110 57 chr20 13700777 13701160 -58452722 + MER90 LTR ERV1 153 555 -20 1384 273 138 12 chr20 13701302 13701889 -58451993 - HsTC2c DNA Tc2 -67 662 2 664 234 57 139 chr20 13702454 13702907 -58450975 + LTR16A1 LTR ERVL 15 430 -27 32 43 0 0 chr20 13703870 13703916 -58449966 + AT_rich Low_complexity Low_complexity 1 46 0 996 241 9 0 chr20 13704214 13704426 -58449456 - MER58A DNA MER1_type -10 214 1 545 355 13 13 chr20 13704786 13704841 -58449041 - MIR SINE MIR -6 256 202 2237 100 0 13 chr20 13704841 13705151 -58448731 - AluSx SINE Alu -6 306 1 545 355 13 13 chr20 13705151 13705326 -58448556 - MIR SINE MIR -59 203 26 358 280 169 62 chr20 13705722 13705827 -58448055 - MIR SINE MIR -12 250 158 2252 112 13 49 chr20 13705827 13706212 -58447670 - THE1C LTR MaLR -4 371 1 358 280 169 62 chr20 13706212 13706331 -58447551 - MIR SINE MIR -104 158 2 2478 204 22 53 chr20 13706700 13707329 -58446553 + L1ME2 LINE L1 5436 6040 -124 2144 101 0 44 chr20 13707329 13707646 -58446236 - AluSx SINE Alu -9 303 1 2478 204 22 53 chr20 13707646 13707758 -58446124 + L1ME2 LINE L1 6040 6154 -10 330 277 37 49 chr20 13710017 13710231 -58443651 - MER58 DNA MER1_type -4 2416 2 239 331 65 19 chr20 13710436 13710590 -58443292 + MIR SINE MIR 53 213 -49 504 329 161 35 chr20 13710948 13711804 -58442078 + L2 LINE L2 1762 2725 -589 192 336 99 53 chr20 13711977 13712108 -58441774 + L2 LINE L2 3136 3272 0 4258 159 28 11 chr20 13712998 13713879 -58440003 + L1MC2 LINE L1 5186 6082 -262 1253 132 9 23 chr20 13713879 13714098 -58439784 + L1MC1 LINE L1 6117 6333 0 674 195 65 12 chr20 13714119 13714288 -58439594 + LTR16A1 LTR ERVL 280 457 0 1258 213 146 29 chr20 13714554 13715005 -58438877 - MLT1D LTR MaLR 0 505 2 2096 85 0 0 chr20 13715037 13715327 -58438555 - AluSx SINE Alu 0 311 22 200 194 0 0 chr20 13715503 13715539 -58438343 - MIR SINE MIR -108 154 119 511 320 39 0 chr20 13716420 13716601 -58437281 + MER5A DNA MER1_type 1 188 -1 833 217 46 6 chr20 13716610 13716785 -58437097 - MER5A DNA MER1_type 0 189 8 21 36 0 0 chr20 13716858 13716886 -58436996 + AT_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr20 13718563 13718604 -58435278 + AT_rich Low_complexity Low_complexity 1 41 0 558 224 100 60 chr20 13718969 13719268 -58434614 - LTR16A1 LTR ERVL 0 457 147 1600 214 55 94 chr20 13719552 13719765 -58434117 - MLT1H LTR MaLR 0 549 329 2192 94 28 3 chr20 13719765 13720052 -58433830 + AluSp SINE Alu 11 304 -9 1600 214 55 94 chr20 13720052 13720361 -58433521 - MLT1H LTR MaLR -220 329 47 281 26 26 0 chr20 13720681 13720719 -58433163 + (TG)n Simple_repeat Simple_repeat 2 40 0 539 214 60 12 chr20 13721023 13721191 -58432691 + MER104 DNA MER2_type 4 179 -1 2332 98 0 13 chr20 13721686 13721993 -58431889 + AluSg1 SINE Alu 6 308 -1 332 277 54 31 chr20 13722357 13722487 -58431395 - MIR SINE MIR -107 155 23 221 326 22 43 chr20 13722552 13722644 -58431238 + MIR SINE MIR 59 145 -63 329 298 5 66 chr20 13722964 13723162 -58430720 - MER117 DNA MER1_type -11 186 1 239 333 99 54 chr20 13723483 13723705 -58430177 + L2 LINE L2 3020 3251 -21 40 99 0 0 chr20 13724083 13724214 -58429668 + AT_rich Low_complexity Low_complexity 1 131 0 23 0 0 0 chr20 13724886 13724909 -58428973 + AT_rich Low_complexity Low_complexity 1 23 0 841 234 16 11 chr20 13725578 13725766 -58428116 + MER5A DNA MER1_type 1 189 0 252 300 71 47 chr20 13725778 13725948 -58427934 + L2 LINE L2 1624 1797 -1517 344 288 66 38 chr20 13725951 13726163 -58427719 + L1M3c LINE L1 535 752 -5911 295 314 11 49 chr20 13726174 13726359 -58427523 + L1M3c LINE L1 1262 1439 -5214 657 231 70 70 chr20 13726747 13726996 -58426886 + L1M3c LINE L1 1439 1687 -4976 2326 91 0 7 chr20 13726996 13727292 -58426590 - AluSx SINE Alu -18 294 1 657 231 70 70 chr20 13727292 13727368 -58426514 + L1M3c LINE L1 1687 1762 -4901 216 0 0 0 chr20 13727368 13727392 -58426490 + (CA)n Simple_repeat Simple_repeat 2 25 0 657 231 70 70 chr20 13727392 13727523 -58426359 + L1M3c LINE L1 1761 1896 -4767 * 8369 242 40 44 chr20 13727517 13728402 -58425480 + L1M4c LINE L1 1200 2087 -4295 2217 73 0 21 chr20 13728402 13728688 -58425194 + AluSp SINE Alu 24 303 -10 8369 242 40 44 chr20 13728688 13729620 -58424262 + L1M4c LINE L1 2087 3021 -3361 1602 122 0 0 chr20 13729620 13729834 -58424048 + AluSq SINE Alu 5 218 -95 8369 242 40 44 chr20 13729834 13729937 -58423945 + L1M4c LINE L1 3021 3123 -3259 3868 48 27 0 chr20 13729937 13730414 -58423468 + LTR2B LTR ERV1 1 490 0 8369 242 40 44 chr20 13730414 13731097 -58422785 + L1M4c LINE L1 3123 3807 -2575 2563 56 0 0 chr20 13731097 13731403 -58422479 + AluY SINE Alu 1 306 -5 8369 242 40 44 chr20 13731403 13732683 -58421199 + L1M4c LINE L1 3807 5148 -1234 318 256 30 113 chr20 13732692 13732860 -58421022 + L2 LINE L2 3113 3266 -47 232 354 80 18 chr20 13732919 13733032 -58420850 + L2 LINE L2 2937 3056 -216 951 293 85 24 chr20 13733670 13734094 -58419788 + LTR16A1 LTR ERVL 8 457 0 784 179 0 15 chr20 13734120 13734254 -58419628 + FLAM_C SINE Alu 1 132 -1 210 91 0 0 chr20 13735093 13735126 -58418756 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 241 304 78 0 chr20 13735355 13735470 -58418412 + L1MC/D LINE L1 5759 5882 -1926 189 147 0 0 chr20 13735600 13735634 -58418248 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 2103 72 41 31 chr20 13735748 13736040 -58417842 - AluY SINE Alu -16 295 1 299 436 0 0 chr20 13737272 13737435 -58416447 - MIR3 SINE MIR -13 195 33 1942 98 16 0 chr20 13737596 13737850 -58416032 - AluSq SINE Alu -55 258 1 674 245 103 5 chr20 13737953 13738247 -58415635 + LTR16A1 LTR ERVL 55 407 -50 2607 185 30 18 chr20 13738848 13739350 -58414532 + MLT2B3 LTR ERVL 1 508 -46 602 280 23 23 chr20 13739657 13739832 -58414050 + MER5B DNA MER1_type 4 178 0 314 292 0 0 chr20 13740060 13740125 -58413757 + L2 LINE L2 3249 3313 0 397 254 212 0 chr20 13740541 13740659 -58413223 + MER5A DNA MER1_type 47 189 0 352 325 54 80 chr20 13741316 13741777 -58412105 + L1M4c LINE L1 1040 1488 -4896 30 83 0 0 chr20 13742152 13742224 -58411658 + AT_rich Low_complexity Low_complexity 1 72 0 510 334 67 26 chr20 13742651 13743112 -58410770 + L1M4c LINE L1 2367 2846 -3536 242 349 42 21 chr20 13743268 13743509 -58410373 + L1M4c LINE L1 3024 3269 -3113 356 335 36 23 chr20 13743589 13743810 -58410072 + L1M4c LINE L1 3389 3612 -2770 180 0 0 0 chr20 13744337 13744357 -58409525 + (CA)n Simple_repeat Simple_repeat 1 20 0 481 232 136 34 chr20 13744696 13744873 -58409009 - MLT1H LTR MaLR -15 534 340 826 303 54 4 chr20 13745009 13745286 -58408596 - MLT1H LTR MaLR -245 304 14 1117 236 75 96 chr20 13745644 13746114 -58407768 - LTR16C LTR ERVL -2 489 30 296 284 0 12 chr20 13746415 13746496 -58407386 + L2 LINE L2 3234 3313 0 421 245 10 0 chr20 13746986 13747084 -58406798 - L1ME3A LINE L1 -5 6165 6067 217 262 83 36 chr20 13747527 13747611 -58406271 + L2 LINE L2 3221 3308 -5 24485 165 12 25 chr20 13749951 13756009 -58397873 + L1PA10 LINE L1 496 6481 -2 293 330 102 35 chr20 13757626 13757911 -58395971 + L2 LINE L2 2562 2865 -449 623 313 48 40 chr20 13758198 13758447 -58395435 + MLT1J2 LTR MaLR 50 300 -150 218 367 0 0 chr20 13758516 13758576 -58395306 + L2 LINE L2 3195 3254 -18 2107 103 0 40 chr20 13758760 13759060 -58394822 + AluSg SINE Alu 3 290 -20 273 295 39 47 chr20 13759222 13759351 -58394531 + MIR SINE MIR 27 154 -108 482 353 59 8 chr20 13759786 13760024 -58393858 + MIR SINE MIR 5 254 -8 299 311 49 60 chr20 13760354 13761330 -58392552 - L1M4 LINE L1 -1440 4706 3742 650 299 168 38 chr20 13761513 13762619 -58391263 - L1M4 LINE L1 -2682 3464 2215 329 250 42 0 chr20 13763193 13763289 -58390593 + MIR SINE MIR 83 182 -80 2031 95 0 4 chr20 13763430 13763747 -58390135 - AluSc SINE Alu 0 356 41 429 253 170 11 chr20 13764018 13764205 -58389677 + MIR SINE MIR 50 262 0 766 206 83 89 chr20 13767748 13768074 -58385808 - MER5C DNA MER1_type 0 324 1 1987 122 26 3 chr20 13768637 13768941 -58384941 + AluSq SINE Alu 1 311 -2 684 56 0 0 chr20 13768956 13769045 -58384837 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 349 329 29 15 chr20 13769393 13769530 -58384352 + MER117 DNA MER1_type 36 174 -23 399 324 39 11 chr20 13769797 13769979 -58383903 - MIR3 SINE MIR -3 205 19 186 321 104 28 chr20 13769990 13770096 -58383786 - L2 LINE L2 -794 2520 2407 379 251 2 16 chr20 13770213 13770324 -58383558 - MLT1I LTR MaLR -2 424 320 503 205 33 16 chr20 13770385 13770507 -58383375 - MLT1I LTR MaLR -231 178 55 246 136 0 0 chr20 13771116 13771160 -58382722 + (A)n Simple_repeat Simple_repeat 1 44 0 232 270 14 0 chr20 13771689 13771763 -58382119 - L1MC/D LINE L1 -759 5585 5511 695 258 127 36 chr20 13772344 13772722 -58381160 + MER57A LTR ERV1 20 401 -2 457 310 42 15 chr20 13772903 13773235 -58380647 - L1MEd LINE L1 -3573 2556 2216 21 36 0 0 chr20 13773735 13773763 -58380119 + AT_rich Low_complexity Low_complexity 1 28 0 755 274 105 21 chr20 13773785 13774398 -58379484 - L1MEd LINE L1 -4655 1655 970 968 138 62 5 chr20 13774708 13774932 -58378950 + MER33 DNA MER1_type 53 289 -35 261 276 16 24 chr20 13775064 13775187 -58378695 - L1MEd LINE L1 -5289 830 709 434 302 13 13 chr20 13775356 13775515 -58378367 - L1ME3A LINE L1 -1 6169 6011 342 0 0 0 chr20 13775519 13775557 -58378325 + (TG)n Simple_repeat Simple_repeat 2 39 0 217 229 21 0 chr20 13775895 13775943 -58377939 + GA-rich Low_complexity Low_complexity 2 50 0 307 288 96 16 chr20 13775970 13776220 -58377662 + L1ME4a LINE L1 5754 6023 -98 594 253 93 0 chr20 13776971 13777121 -58376761 + MER5A DNA MER1_type 25 188 -1 2050 80 91 14 chr20 13777657 13777944 -58375938 + AluSp SINE Alu 3 311 -2 1957 183 8 11 chr20 13778229 13778595 -58375287 - MLT1A1 LTR MaLR 0 365 1 537 306 128 26 chr20 13778799 13779103 -58374779 - MLT1H LTR MaLR -214 335 1 594 301 92 68 chr20 13779104 13779572 -58374310 + L2 LINE L2 2487 2965 -349 8754 178 28 39 chr20 13780348 13780547 -58373335 - L1MA9 LINE L1 -282 6030 5830 1932 168 0 0 chr20 13780547 13780845 -58373037 - AluJb SINE Alu -14 298 1 8754 178 28 39 chr20 13780845 13782314 -58371568 - L1MA9 LINE L1 -482 5830 4388 1723 173 92 24 chr20 13782314 13782685 -58371197 - MSTD LTR MaLR 0 396 1 8754 178 28 39 chr20 13782685 13783596 -58370286 - L1MA9 LINE L1 -1924 4388 3469 1241 124 0 40 chr20 13783613 13783814 -58370068 - AluSg/x SINE Alu 0 312 120 661 200 0 19 chr20 13783816 13783971 -58369911 - L1MA9 LINE L1 -2675 3471 3320 1216 177 52 0 chr20 13783971 13784207 -58369675 + L1MA9 LINE L1 6051 6312 0 7419 42 2 8 chr20 13784337 13785599 -58368283 - L1PA5 LINE L1 -2 6152 4894 7317 45 4 0 chr20 13785599 13786506 -58367376 + L1PA5 LINE L1 3968 4878 -1268 216 340 129 27 chr20 13787301 13787448 -58366434 - MER5B DNA MER1_type -16 162 1 1054 237 153 58 chr20 13787502 13787642 -58366240 - MLT1H LTR MaLR -2 547 422 2028 157 97 40 chr20 13787642 13787743 -58366139 + MSTA LTR MaLR 4 98 -330 2080 120 0 44 chr20 13787743 13788060 -58365822 - AluY SINE Alu -8 303 1 2028 157 97 40 chr20 13788060 13788360 -58365522 + MSTA LTR MaLR 98 428 0 1054 237 153 58 chr20 13788360 13788717 -58365165 - MLT1H LTR MaLR -127 422 3 574 287 11 55 chr20 13789451 13789632 -58364250 - MER5B DNA MER1_type 0 178 6 184 256 115 39 chr20 13789655 13789733 -58364149 - L2 LINE L2 -1 3271 3188 345 388 22 27 chr20 13789937 13790161 -58363721 + MIR SINE MIR 30 252 -10 1174 289 73 145 chr20 13790984 13791425 -58362457 + L2 LINE L2 95 566 -2748 1771 144 28 7 chr20 13791425 13791709 -58362173 - AluJb SINE Alu -11 301 12 1174 289 73 145 chr20 13791709 13792322 -58361560 + L2 LINE L2 566 1221 -2093 1500 156 21 64 chr20 13792322 13792604 -58361278 + AluJb SINE Alu 28 297 -15 402 21 0 0 chr20 13792611 13792658 -58361224 + (CA)n Simple_repeat Simple_repeat 2 48 0 1174 289 73 145 chr20 13792658 13792875 -58361007 + L2 LINE L2 1227 1458 -1856 230 213 0 0 chr20 13792875 13792922 -58360960 - MLT1I LTR MaLR -263 146 100 1174 289 73 145 chr20 13792922 13794457 -58359425 + L2 LINE L2 1458 2752 -562 894 206 123 4 chr20 13794458 13794686 -58359196 - MLT1G LTR MaLR 0 590 336 1883 218 64 57 chr20 13794707 13795268 -58358614 + L1MCb LINE L1 413 975 -5124 438 53 0 0 chr20 13795268 13795325 -58358557 + (CA)n Simple_repeat Simple_repeat 2 58 0 1883 218 64 57 chr20 13795325 13795602 -58358280 + L1MCb LINE L1 975 1248 -4851 * 5692 203 38 33 chr20 13795601 13796493 -58357389 + L1MC3 LINE L1 5055 4652 -1494 2185 150 18 10 chr20 13796493 13796880 -58357002 + MLT1B LTR MaLR 1 390 0 5692 203 38 33 chr20 13796880 13797637 -58356245 + L1MC3 LINE L1 4651 5403 -743 310 220 113 81 chr20 13797668 13797809 -58356073 + L1MD3 LINE L1 6847 6997 -998 2420 176 31 0 chr20 13797809 13798224 -58355658 + MSTA LTR MaLR 1 428 0 310 220 113 81 chr20 13798224 13798268 -58355614 + L1MD3 LINE L1 6997 7038 -957 2542 164 40 31 chr20 13798279 13798858 -58355024 + L1MC3 LINE L1 7201 7784 -1 3765 180 19 12 chr20 13798870 13799672 -58354210 + L1MB7 LINE L1 5347 6153 -31 233 170 6 39 chr20 13799673 13799734 -58354148 - Charlie5 DNA MER1_type -200 2412 2327 723 205 152 0 chr20 13799803 13799954 -58353928 + MER5A DNA MER1_type 10 183 -6 24 0 0 0 chr20 13800459 13800483 -58353399 + AT_rich Low_complexity Low_complexity 1 24 0 2097 121 7 0 chr20 13801542 13801840 -58352042 + AluSx SINE Alu 2 301 -11 24 0 0 0 chr20 13801935 13801959 -58351923 + AT_rich Low_complexity Low_complexity 1 24 0 2393 119 0 0 chr20 13802208 13802520 -58351362 - AluSx SINE Alu 0 312 1 235 281 0 0 chr20 13804777 13804834 -58349048 + (TG)n Simple_repeat Simple_repeat 2 58 0 2245 257 77 26 chr20 13804991 13805947 -58347935 - L2 LINE L2 -5 3308 2299 184 309 32 21 chr20 13806106 13806200 -58347682 + MIR SINE MIR 51 145 -117 789 250 53 13 chr20 13806200 13806428 -58347454 - LTR16A1 LTR ERVL 0 457 221 1675 193 0 7 chr20 13807221 13807522 -58346360 + AluJb SINE Alu 1 299 -13 180 169 119 51 chr20 13807787 13807846 -58346036 + MIR SINE MIR 103 165 -97 1294 220 7 17 chr20 13808104 13808400 -58345482 + LTR51 LTR ERV1 225 517 -154 3497 169 15 7 chr20 13808451 13809065 -58344817 + LTR31 LTR ERV1 1 619 0 210 300 0 0 chr20 13809228 13809278 -58344604 + MIR SINE MIR 172 221 -41 1886 146 33 3 chr20 13809311 13809640 -58344242 - MER2 DNA MER2_type 0 345 7 3424 210 91 6 chr20 13809654 13810431 -58343451 + MER21B LTR ERV1 20 862 -1 651 186 105 0 chr20 13810655 13810779 -58343103 - FAM SINE Alu -21 164 28 239 325 38 0 chr20 13810792 13810872 -58343010 - MIR SINE MIR -73 189 107 2923 177 19 14 chr20 13810988 13811580 -58342302 - LTR49 LTR ERV1 0 595 1 982 282 95 52 chr20 13812304 13812819 -58341063 + MLT1H LTR MaLR 13 549 0 2432 50 0 0 chr20 13813042 13813368 -58340514 - AluY SINE Alu 0 326 1 465 235 110 71 chr20 13813671 13813926 -58339956 - LTR16A1 LTR ERVL -190 267 3 3166 150 51 33 chr20 13813986 13814593 -58339289 + LTR35 LTR ERV1 1 618 0 460 360 32 62 chr20 13814631 13815000 -58338882 + L2 LINE L2 2911 3268 -4 352 242 54 72 chr20 13815489 13815712 -58338170 - L1ME3A LINE L1 -4 6166 5948 818 165 45 5 chr20 13815765 13815965 -58337917 - L1MA7 LINE L1 -2 6289 6082 297 0 0 0 chr20 13816153 13816186 -58337696 + (TG)n Simple_repeat Simple_repeat 2 34 0 279 0 0 0 chr20 13816326 13816357 -58337525 + (TG)n Simple_repeat Simple_repeat 1 31 0 188 307 88 35 chr20 13816816 13816930 -58336952 - L2 LINE L2 -8 3264 3145 1184 203 44 70 chr20 13817618 13818017 -58335865 - MLT1B LTR MaLR -2 465 1 240 167 0 0 chr20 13818285 13818333 -58335549 + CT-rich Low_complexity Low_complexity 3 50 0 487 324 94 9 chr20 13818844 13819057 -58334825 + MIR SINE MIR 30 260 -2 2625 186 20 15 chr20 13819329 13819866 -58334016 - MER67A LTR ERV1 0 543 4 195 250 0 0 chr20 13821078 13821126 -58332756 - MIR SINE MIR -30 232 185 2079 247 53 93 chr20 13821282 13822612 -58331270 + L1M4 LINE L1 168 1444 -5098 3173 152 11 32 chr20 13822612 13822919 -58330963 + L1MB7 LINE L1 5570 5882 -302 2185 93 0 0 chr20 13822919 13823199 -58330683 + AluY SINE Alu 1 280 -31 185 0 40 0 chr20 13823203 13823228 -58330654 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3173 152 11 32 chr20 13823228 13823534 -58330348 + L1MB7 LINE L1 5885 6175 -9 217 254 237 0 chr20 13823540 13823654 -58330228 + MIR SINE MIR 97 237 -25 2103 107 0 4 chr20 13824257 13824538 -58329344 + AluSg SINE Alu 1 280 -30 274 151 0 19 chr20 13825482 13825535 -58328347 - Charlie5 DNA MER1_type -33 2579 2528 2651 223 72 42 chr20 13825544 13825608 -58328274 - L1ME1 LINE L1 -18 6082 6021 1242 231 101 42 chr20 13825608 13826085 -58327797 - MLT1D LTR MaLR 0 505 1 2651 223 72 42 chr20 13826085 13827122 -58326760 - L1ME1 LINE L1 -79 6021 4960 2256 240 83 96 chr20 13827116 13828268 -58325614 - L1ME1 LINE L1 -2281 3799 2634 * 2200 130 40 8 chr20 13828268 13828621 -58325261 - THE1B LTR MaLR 0 364 1 2256 240 83 96 chr20 13828621 13828771 -58325111 - L1ME1 LINE L1 -3446 2634 2514 2065 132 27 128 chr20 13828771 13829247 -58324635 + MSTA LTR MaLR 1 428 0 2256 240 83 96 chr20 13829247 13829366 -58324516 - L1ME1 LINE L1 -3566 2514 2395 614 266 70 56 chr20 13829370 13829855 -58324027 - L1ME1 LINE L1 -5196 874 383 402 342 88 9 chr20 13829859 13830087 -58323795 - L1ME1 LINE L1 -5595 475 230 1182 156 33 5 chr20 13830718 13830929 -58322953 + MSTB LTR MaLR 210 426 0 620 72 0 0 chr20 13831137 13831220 -58322662 - AluY SINE Alu -235 83 1 2163 140 0 0 chr20 13831612 13831920 -58321962 - AluSx SINE Alu -4 308 1 723 260 20 10 chr20 13832276 13832480 -58321402 - LTR16C LTR ERVL -47 444 239 2528 66 0 0 chr20 13833645 13833947 -58319935 - AluY SINE Alu -9 302 1 208 258 16 0 chr20 13834176 13834238 -58319644 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 305 192 0 50 chr20 13834570 13834669 -58319213 + L2 LINE L2 3102 3195 -118 1778 134 20 51 chr20 13834670 13834713 -58319169 - MER1B DNA MER1_type -2373 339 296 3096 143 68 45 chr20 13834713 13835333 -58318549 - MER51A LTR ERV1 0 634 1 1778 134 20 51 chr20 13835333 13835639 -58318243 - MER1B DNA MER1_type -2416 296 1 874 273 112 44 chr20 13835675 13835707 -58318175 + LTR16C LTR ERVL 6 34 -457 1942 173 57 37 chr20 13835707 13836165 -58317717 + MLT1C LTR MaLR 1 467 0 874 273 112 44 chr20 13836165 13836587 -58317295 + LTR16C LTR ERVL 34 491 0 259 261 65 0 chr20 13836587 13836679 -58317203 + L2 LINE L2 3216 3313 0 310 257 138 0 chr20 13837362 13837471 -58316411 - MIR SINE MIR -29 233 110 456 266 46 39 chr20 13837703 13837950 -58315932 + MLT1G1 LTR MaLR 1 284 -306 402 248 102 15 chr20 13838078 13838215 -58315667 + MLT1G1 LTR MaLR 447 595 0 354 367 14 14 chr20 13839052 13839199 -58314683 + L2 LINE L2 2825 2971 -343 411 21 0 0 chr20 13839208 13839256 -58314626 + (TC)n Simple_repeat Simple_repeat 2 49 0 801 291 183 12 chr20 13839341 13839750 -58314132 - LTR16C LTR ERVL -8 483 5 194 267 0 0 chr20 13839834 13839879 -58314003 - L2 LINE L2 -226 3046 3002 3419 217 19 22 chr20 13840156 13840985 -58312897 + L1MD2 LINE L1 5319 6145 -214 688 42 21 0 chr20 13841050 13841146 -58312736 + (TAGA)n Simple_repeat Simple_repeat 2 99 0 383 147 0 0 chr20 13841146 13841214 -58312668 - 7SK RNA RNA -5 188 121 756 153 21 14 chr20 13841233 13841377 -58312505 - 7SK RNA RNA -48 145 1 565 14 27 0 chr20 13841377 13841451 -58312431 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 358 232 9 36 chr20 13841457 13841569 -58312313 + L1MD3 LINE L1 7878 7986 -9 244 266 0 32 chr20 13841791 13841885 -58311997 - L1ME3A LINE L1 -174 5996 5906 1610 173 3 33 chr20 13843860 13844160 -58309722 + AluJo SINE Alu 1 291 -21 369 0 0 0 chr20 13844175 13844216 -58309666 + (CA)n Simple_repeat Simple_repeat 2 42 0 360 0 0 0 chr20 13844365 13844405 -58309477 + (TG)n Simple_repeat Simple_repeat 2 41 0 1578 130 22 77 chr20 13845692 13846079 -58307803 + MER67C LTR ERV1 6 403 -243 271 253 13 0 chr20 13846141 13846216 -58307666 + MER67D LTR ERV1 433 508 -6 258 151 40 32 chr20 13846420 13846546 -58307336 + (TATAA)n Simple_repeat Simple_repeat 5 131 0 326 294 19 12 chr20 13846649 13846658 -58307224 + (TATATG)n Simple_repeat Simple_repeat 1 8 -153 3116 196 23 23 chr20 13846658 13847171 -58306711 + MER82 DNA MER2_type 1 516 -137 2333 52 3 3 chr20 13847171 13847459 -58306423 - AluY SINE Alu -23 288 1 3116 196 23 23 chr20 13847459 13847598 -58306284 + MER82 DNA MER2_type 515 653 0 326 294 19 12 chr20 13847598 13847748 -58306134 + (TATATG)n Simple_repeat Simple_repeat 8 161 0 245 29 29 0 chr20 13847748 13847782 -58306100 + (GA)n Simple_repeat Simple_repeat 1 35 0 347 169 15 0 chr20 13847847 13847912 -58305970 + Charlie4 DNA MER1_type 1871 1936 -25 1082 214 75 57 chr20 13848581 13848697 -58305185 + L1MC4 LINE L1 7577 7689 -353 2013 123 26 15 chr20 13848697 13849039 -58304843 + L1PA16 LINE L1 5812 6157 -9 1082 214 75 57 chr20 13849039 13849246 -58304636 + L1MC4 LINE L1 7689 7913 -129 324 0 0 0 chr20 13849246 13849282 -58304600 + (TG)n Simple_repeat Simple_repeat 2 37 0 1082 214 75 57 chr20 13849282 13849410 -58304472 + L1MC4 LINE L1 7913 8037 -5 264 137 0 0 chr20 13849632 13849683 -58304199 + (TC)n Simple_repeat Simple_repeat 2 52 0 542 193 100 157 chr20 13849697 13849927 -58303955 - MLT1G LTR MaLR -283 312 105 2007 177 37 0 chr20 13849927 13850277 -58303605 + MLT1A1 LTR MaLR 2 364 -1 542 193 100 157 chr20 13850277 13850377 -58303505 - MLT1G LTR MaLR -490 105 1 316 286 23 15 chr20 13850668 13850801 -58303081 - LTR16C LTR ERVL 0 491 358 1426 209 55 16 chr20 13851184 13851533 -58302349 - MER63B DNA MER1_type -661 401 34 180 0 0 0 chr20 13851533 13851553 -58302329 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1426 209 55 16 chr20 13851553 13851586 -58302296 - MER63B DNA MER1_type -1028 34 4 252 128 43 0 chr20 13852947 13852994 -58300888 + MLT1I LTR MaLR 98 146 -263 793 274 84 29 chr20 13853048 13853358 -58300524 + MLT1H LTR MaLR 15 341 -208 484 295 35 0 chr20 13853547 13853720 -58300162 + MLT1I LTR MaLR 231 409 0 21 0 0 0 chr20 13853908 13853929 -58299953 + AT_rich Low_complexity Low_complexity 1 21 0 936 184 18 0 chr20 13853929 13854092 -58299790 - FAM SINE Alu -9 166 1 2231 239 21 35 chr20 13854798 13854970 -58298912 + L1ME3A LINE L1 5521 5694 -476 1436 225 18 11 chr20 13854970 13855254 -58298628 - AluJo SINE Alu -22 290 5 2231 239 21 35 chr20 13855254 13855737 -58298145 + L1ME3A LINE L1 5694 6167 -3 188 298 18 0 chr20 13855901 13855958 -58297924 + L2 LINE L2 3255 3312 -1 432 0 0 0 chr20 13855959 13856007 -58297875 + (TGGA)n Simple_repeat Simple_repeat 2 49 0 335 344 16 8 chr20 13856013 13856135 -58297747 + L2 LINE L2 3134 3256 -16 932 80 17 11 chr20 13856152 13856195 -58297687 + (GGGAA)n Simple_repeat Simple_repeat 1 219 0 932 80 17 11 chr20 13856195 13856370 -58297512 + (GGGAA)n Simple_repeat Simple_repeat 5 180 0 2247 184 63 31 chr20 13856713 13857255 -58296627 + MER34B LTR ERV1 7 565 0 343 305 105 23 chr20 13857314 13857458 -58296424 - MIR SINE MIR -65 143 32 305 319 138 7 chr20 13857598 13857736 -58296146 - MIR SINE MIR -104 158 3 689 263 22 0 chr20 13857766 13857945 -58295937 - MER5A DNA MER1_type -3 186 4 253 254 16 0 chr20 13857946 13858009 -58295873 - MIR SINE MIR -71 191 128 184 264 113 0 chr20 13858074 13858127 -58295755 - MIR SINE MIR -93 115 57 1736 113 0 42 chr20 13859303 13859568 -58294314 + AluSx SINE Alu 1 254 -58 1480 78 0 0 chr20 13859685 13859865 -58294017 - AluY SINE Alu -131 180 1 1367 183 11 0 chr20 13859887 13860172 -58293710 - L1MB7 LINE L1 -327 5857 5570 532 221 57 0 chr20 13860168 13860326 -58293556 - L1M4 LINE L1 -5094 1448 1282 * 720 130 0 9 chr20 13860338 13860475 -58293407 + AluY SINE Alu 194 311 0 2148 114 6 25 chr20 13861248 13861565 -58292317 + AluSx SINE Alu 1 311 -1 236 292 0 0 chr20 13861636 13861684 -58292198 - MIR SINE MIR -211 51 4 313 179 0 0 chr20 13861714 13861770 -58292112 - MER5A DNA MER1_type -2 187 132 584 291 19 5 chr20 13862275 13862485 -58291397 + LTR16A1 LTR ERVL 245 457 0 2163 98 21 0 chr20 13862762 13863048 -58290834 - AluSc SINE Alu -17 292 1 228 372 22 15 chr20 13863125 13863262 -58290620 + L2 LINE L2 2922 3059 -213 996 213 76 57 chr20 13863266 13863776 -58290106 - MLT1E2 LTR MaLR -2 503 3 636 208 89 42 chr20 13863889 13863912 -58289970 - MIR SINE MIR -27 235 215 198 0 0 0 chr20 13863912 13863934 -58289948 + (TA)n Simple_repeat Simple_repeat 1 22 0 2745 68 5 8 chr20 13863934 13864303 -58289579 - L1PA6 LINE L1 -19 6135 5768 636 208 89 42 chr20 13864303 13864446 -58289436 - MIR SINE MIR -46 216 60 521 276 109 42 chr20 13864465 13864867 -58289015 + MLT1J2 LTR MaLR 21 449 -1 213 284 11 0 chr20 13865936 13866024 -58287858 + (TA)n Simple_repeat Simple_repeat 1 89 0 307 332 69 57 chr20 13866068 13866417 -58287465 + L2 LINE L2 2216 2568 -746 308 117 0 33 chr20 13866531 13866591 -58287291 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 190 388 31 0 chr20 13866645 13866774 -58287108 - L2 LINE L2 -176 3137 3005 833 293 85 64 chr20 13866867 13867419 -58286463 - L2 LINE L2 -321 2992 2431 291 274 83 24 chr20 13867594 13867762 -58286120 - LTR33A LTR ERVL -3 520 343 311 280 11 0 chr20 13868279 13868372 -58285510 - MLT1H LTR MaLR -337 212 119 951 224 224 18 chr20 13868575 13868906 -58284976 - MLT1H LTR MaLR -71 478 80 714 238 9 101 chr20 13868918 13869263 -58284619 + MLT1H LTR MaLR 171 547 -2 2136 145 3 0 chr20 13869396 13869707 -58284175 - AluSx SINE Alu 0 312 1 485 293 21 14 chr20 13869831 13869971 -58283911 + MIR SINE MIR 13 153 -109 720 231 121 10 chr20 13870235 13870434 -58283448 + MER58A DNA MER1_type 1 221 -3 766 247 11 16 chr20 13870452 13870634 -58283248 - MER5A DNA MER1_type -8 181 1 208 211 39 0 chr20 13871800 13871852 -58282030 + CT-rich Low_complexity Low_complexity 2 55 0 783 157 24 0 chr20 13871864 13871899 -58281983 + CT-rich Low_complexity Low_complexity 3 36 -136 2081 170 15 50 chr20 13871899 13872375 -58281507 + MER65C LTR ERV1 1 459 -2 783 157 24 0 chr20 13872375 13872505 -58281377 + CT-rich Low_complexity Low_complexity 36 172 0 1550 163 108 18 chr20 13872655 13872987 -58280895 + MLT1A1 LTR MaLR 1 362 -3 440 212 12 0 chr20 13873105 13873190 -58280692 + LTR16C LTR ERVL 406 491 0 286 273 36 0 chr20 13873686 13873796 -58280086 + L1MEd LINE L1 45 158 -5961 1235 202 4 4 chr20 13874241 13874469 -58279413 + AluJo SINE Alu 64 291 -21 228 211 0 0 chr20 13874479 13874531 -58279351 - MLT1J2 LTR MaLR -33 417 366 737 239 135 90 chr20 13874675 13875235 -58278647 + MLT1H LTR MaLR 1 553 -2 735 178 25 31 chr20 13875259 13875422 -58278460 - MLT1J2 LTR MaLR -272 178 17 526 314 56 13 chr20 13875657 13876049 -58277833 + L1M4 LINE L1 3425 3833 -2313 227 188 43 0 chr20 13876054 13876123 -58277759 + (TA)n Simple_repeat Simple_repeat 1 72 0 7673 166 97 30 chr20 13876160 13876554 -58277328 + L1MCa LINE L1 24 390 -6036 1967 83 9 98 chr20 13876554 13876711 -58277171 + AluSx SINE Alu 1 117 -195 2384 47 0 0 chr20 13876711 13877014 -58276868 + AluY SINE Alu 6 308 0 1967 83 9 98 chr20 13877014 13877180 -58276702 + AluSx SINE Alu 117 296 -16 7673 166 97 30 chr20 13877180 13878490 -58275392 + L1MCa LINE L1 390 1854 -4572 2219 100 0 3 chr20 13878490 13878808 -58275074 + AluSx SINE Alu 1 312 0 7673 166 97 30 chr20 13878808 13878882 -58275000 + L1MCa LINE L1 1854 1922 -4504 233 0 62 0 chr20 13879035 13879067 -58274815 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 463 316 76 0 chr20 13879110 13879360 -58274522 + L1M4 LINE L1 4069 4337 -1809 606 224 7 22 chr20 13879436 13879643 -58274239 - L1M4 LINE L1 -1520 4626 4420 287 65 22 0 chr20 13879794 13879840 -58274042 + (CA)n Simple_repeat Simple_repeat 2 48 0 1018 71 0 0 chr20 13879978 13880104 -58273778 - AluY SINE Alu -13 298 173 527 307 42 0 chr20 13880137 13880326 -58273556 + MIR SINE MIR 4 200 -62 255 217 0 0 chr20 13880475 13880535 -58273347 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 399 284 155 7 chr20 13880649 13880744 -58273138 + L1ME3A LINE L1 5619 5699 -471 444 19 0 0 chr20 13880744 13880797 -58273085 + (CA)n Simple_repeat Simple_repeat 2 54 0 399 284 155 7 chr20 13880797 13880979 -58272903 + L1ME3A LINE L1 5699 5937 -233 29 0 0 0 chr20 13881331 13881360 -58272522 + AT_rich Low_complexity Low_complexity 1 29 0 2321 217 68 21 chr20 13881603 13882217 -58271665 - MER82 DNA MER2_type -10 643 1 654 331 98 11 chr20 13882382 13882750 -58271132 + L2 LINE L2 692 1091 -2223 439 358 78 20 chr20 13882723 13883067 -58270815 + L2 LINE L2 2926 3289 -24 * 22 0 0 0 chr20 13883465 13883487 -58270395 + AT_rich Low_complexity Low_complexity 1 22 0 233 360 54 0 chr20 13884026 13884137 -58269745 + L2 LINE L2 3197 3313 0 533 328 88 65 chr20 13884137 13885024 -58268858 + L2 LINE L2 1449 2355 -959 1318 205 18 76 chr20 13885139 13885519 -58268363 + MLT1A1 LTR MaLR 8 365 0 2377 244 52 40 chr20 13885520 13886249 -58267633 - MER21B LTR ERV1 -107 756 19 283 185 37 0 chr20 13886287 13886341 -58267541 - MER21B LTR ERV1 -796 67 12 701 290 142 60 chr20 13886678 13887155 -58266727 + L2 LINE L2 1328 1851 -1463 2097 147 7 3 chr20 13887155 13887455 -58266427 + AluSx SINE Alu 1 301 -11 701 290 142 60 chr20 13887455 13887490 -58266392 + L2 LINE L2 1851 1882 -1432 997 283 26 10 chr20 13887493 13887800 -58266082 - L2 LINE L2 -1190 2124 1813 1794 242 129 10 chr20 13887806 13888301 -58265581 - MER68 LTR ERV1 -8 554 1 393 270 123 56 chr20 13888301 13888553 -58265329 - L2 LINE L2 -1493 1821 1553 2450 77 0 0 chr20 13888568 13888878 -58265004 + AluY SINE Alu 1 310 -1 24 53 0 0 chr20 13889447 13889485 -58264397 + AT_rich Low_complexity Low_complexity 1 38 0 3999 185 41 11 chr20 13889618 13890395 -58263487 + Tigger6a DNA MER2_type 4 811 -786 2154 130 3 0 chr20 13890395 13890696 -58263186 - AluSx SINE Alu -10 302 1 3999 185 41 11 chr20 13890696 13890768 -58263114 + Tigger6a DNA MER2_type 811 879 -204 1529 162 8 113 chr20 13890774 13891163 -58262719 + MER7A DNA MER2_type 1 346 0 241 309 0 0 chr20 13891214 13891269 -58262613 + Tigger6a DNA MER2_type 1027 1081 -2 308 121 35 0 chr20 13891282 13891340 -58262542 + CT-rich Low_complexity Low_complexity 4 63 0 237 259 45 94 chr20 13891616 13891817 -58262065 - L1ME LINE L1 -474 5647 5457 2267 155 75 20 chr20 13891866 13892694 -58261188 + MER21A LTR ERV1 1 931 0 430 299 122 9 chr20 13893275 13893489 -58260393 + MER102a DNA MER1_type 68 305 -25 538 174 0 32 chr20 13894292 13894447 -58259435 + CT-rich Low_complexity Low_complexity 3 152 0 1067 280 98 17 chr20 13894491 13894962 -58258920 - MER20B DNA MER1_type -274 509 1 648 280 69 18 chr20 13894962 13895180 -58258702 + L2 LINE L2 802 1030 -2284 837 298 23 12 chr20 13895257 13895584 -58258298 + LTR16A1 LTR ERVL 151 457 0 187 284 0 95 chr20 13896124 13896219 -58257663 + L2 LINE L2 3181 3266 -6 279 345 98 51 chr20 13896523 13896912 -58256970 + L2 LINE L2 2814 3220 -52 305 82 20 0 chr20 13897008 13897057 -58256825 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 219 103 0 0 chr20 13897222 13897261 -58256621 + (TAA)n Simple_repeat Simple_repeat 3 41 0 457 273 23 0 chr20 13897727 13897859 -58256023 + MLT1H LTR MaLR 392 526 -23 2203 248 44 19 chr20 13898893 13899639 -58254243 + L1ME3A LINE L1 5406 6167 -3 233 288 9 54 chr20 13899708 13899819 -58254063 + MIR SINE MIR 92 197 -65 2123 43 86 7 chr20 13900567 13900847 -58253035 - AluY SINE Alu -9 302 1 624 210 59 27 chr20 13900863 13901049 -58252833 - MER20 DNA MER1_type 0 219 28 250 349 16 69 chr20 13901522 13901711 -58252171 + LTR16C LTR ERVL 71 249 -242 537 246 175 12 chr20 13901711 13901951 -58251931 + LTR16C LTR ERVL 204 482 -9 245 219 37 49 chr20 13903065 13903147 -58250735 + MLT1H LTR MaLR 63 143 -412 475 118 0 75 chr20 13903160 13903253 -58250629 - MLT1H LTR MaLR -246 303 218 341 231 15 0 chr20 13903232 13903297 -58250585 + MLT1H LTR MaLR 285 350 -199 * 1440 134 88 69 chr20 13904221 13904527 -58249355 + AluJb SINE Alu 1 312 0 453 264 16 25 chr20 13904813 13904934 -58248948 + MER5B DNA MER1_type 2 121 -57 696 115 0 0 chr20 13904942 13905038 -58248844 + AluSp/q SINE Alu 196 291 -22 319 149 0 0 chr20 13905040 13905087 -58248795 + MER5B DNA MER1_type 129 175 -3 1082 170 68 4 chr20 13905095 13905344 -58248538 + MER33 DNA MER1_type 1 256 -68 5154 53 5 9 chr20 13905429 13906084 -58247798 - L1PA7 LINE L1 -4 6150 5499 348 222 153 0 chr20 13906229 13906373 -58247509 - Charlie1 DNA MER1_type 0 2761 2596 * 3803 165 42 9 chr20 13906372 13907166 -58246716 - Charlie1 DNA MER1_type -353 2408 1589 180 0 0 0 chr20 13907742 13907762 -58246120 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2292 113 3 0 chr20 13907950 13908261 -58245621 - AluSx SINE Alu 0 312 1 327 89 30 0 chr20 14010641 14010709 -58143173 + Alu SINE Alu 1 48 -254 242 208 52 78 chr20 14011848 14011925 -58141957 + MIR3 SINE MIR 108 182 -26 2259 89 3 3 chr20 14012070 14012372 -58141510 + AluSx SINE Alu 1 302 -10 1313 77 0 56 chr20 14012375 14012571 -58141311 + AluSg/x SINE Alu 128 312 0 246 284 14 0 chr20 14016989 14017063 -58136819 - MER34B LTR ERV1 -3 562 488 240 280 56 9 chr20 14017359 14017466 -58136416 - MER34B LTR ERV1 -443 122 11 380 225 0 0 chr20 14017482 14017562 -58136320 - LTR49 LTR ERV1 0 595 516 2274 99 0 0 chr20 14017679 14017981 -58135901 - AluSx SINE Alu -10 302 1 494 246 66 66 chr20 14018066 14018294 -58135588 - LTR48B LTR ERV1 -390 232 5 486 260 0 0 chr20 14020270 14020661 -58133221 + (CA)n Simple_repeat Simple_repeat 1 391 0 202 53 0 53 chr20 14126069 14126107 -58027775 + (AGGGGG)n Simple_repeat Simple_repeat 6 41 0 2186 83 3 10 chr20 14126437 14126737 -58027145 + AluSg1 SINE Alu 4 301 -8 452 194 29 0 chr20 14126849 14126952 -58026930 + LTR37A LTR ERV1 52 157 -269 604 255 68 116 chr20 14126957 14127089 -58026793 + MLT1C LTR MaLR 1 138 -329 2368 100 0 0 chr20 14127089 14127399 -58026483 - AluSq SINE Alu -1 312 3 604 255 68 116 chr20 14127399 14127740 -58026142 + MLT1C LTR MaLR 138 451 -16 476 211 28 21 chr20 14127884 14128026 -58025856 + LTR37A LTR ERV1 284 426 0 277 260 0 0 chr20 14129154 14129227 -58024655 + MER20 DNA MER1_type 1 73 -146 787 245 126 47 chr20 14131303 14131621 -58022261 - MER2 DNA MER2_type 0 344 2 818 167 8 0 chr20 14131629 14131761 -58022121 - FLAM_A SINE Alu 0 133 1 546 179 11 6 chr20 14132097 14132276 -58021606 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 786 148 0 7 chr20 14132310 14132575 -58021307 + (TGGA)n Simple_repeat Simple_repeat 1 263 0 629 146 6 17 chr20 14132588 14132766 -58021116 + (TGGA)n Simple_repeat Simple_repeat 2 177 0 330 191 30 32 chr20 14133005 14133280 -58020602 + (TGAG)n Simple_repeat Simple_repeat 1 274 0 557 138 0 87 chr20 14133308 14133503 -58020379 + (TGAA)n Simple_repeat Simple_repeat 1 178 0 520 135 22 65 chr20 14133550 14133735 -58020147 + (TGAA)n Simple_repeat Simple_repeat 1 177 0 21 0 0 0 chr20 14133860 14133881 -58020001 + AT_rich Low_complexity Low_complexity 1 21 0 2195 92 0 0 chr20 14134294 14134597 -58019285 + AluSx SINE Alu 1 303 0 4196 116 14 33 chr20 14135201 14135447 -58018435 + MER41B LTR ERV1 1 250 -385 2303 60 0 17 chr20 14135447 14135745 -58018137 - AluY SINE Alu -18 293 1 1454 92 0 14 chr20 14135745 14135952 -58017930 - AluSg/x SINE Alu -12 298 95 4196 116 14 33 chr20 14135952 14136080 -58017802 + MER41B LTR ERV1 249 378 -257 1932 160 3 6 chr20 14136080 14136392 -58017490 + AluSx SINE Alu 1 311 -1 4196 116 14 33 chr20 14136392 14136660 -58017222 + MER41B LTR ERV1 378 633 -2 375 294 15 22 chr20 14136680 14136816 -58017066 - MER4D LTR ERV1 0 903 769 2829 202 13 50 chr20 14136931 14137088 -58016794 - MER4D LTR ERV1 -110 793 632 2275 94 0 0 chr20 14137088 14137386 -58016496 - AluSx SINE Alu -9 303 6 2829 202 13 50 chr20 14137386 14137907 -58015975 - MER4D LTR ERV1 -271 632 140 291 194 14 125 chr20 14137915 14137999 -58015883 - LTR38B LTR ERV1 0 610 547 2560 52 0 0 chr20 14137999 14138309 -58015573 + AluY SINE Alu 2 311 0 291 194 14 125 chr20 14138309 14138368 -58015514 - LTR38B LTR ERV1 -63 547 483 3667 145 55 3 chr20 14138488 14139164 -58014718 + MER50 LTR ERV1 1 711 -23 382 244 8 42 chr20 14139516 14139635 -58014247 - LTR38B LTR ERV1 -495 115 1 379 193 37 0 chr20 14139635 14139752 -58014130 - MER49 LTR ERV1 -770 133 1 558 108 0 0 chr20 14141089 14141172 -58012710 + (GGA)n Simple_repeat Simple_repeat 1 83 0 1536 84 25 199 chr20 14142114 14142471 -58011411 - AluSq SINE Alu -8 295 1 1994 121 28 0 chr20 14142953 14143242 -58010640 - AluSx SINE Alu -15 297 1 2493 61 3 0 chr20 14143252 14143562 -58010320 - AluY SINE Alu 0 311 1 1866 163 0 3 chr20 14143564 14143880 -58010002 - AluJo SINE Alu -18 294 1 1334 166 0 14 chr20 14144022 14144245 -58009637 - AluJb SINE Alu -7 305 86 23 0 0 0 chr20 14144247 14144270 -58009612 + AT_rich Low_complexity Low_complexity 1 23 0 2243 96 0 10 chr20 14145038 14145207 -58008675 - AluSg SINE Alu -10 300 134 2257 101 7 0 chr20 14145207 14145513 -58008369 - AluSp SINE Alu -5 308 1 2243 96 0 10 chr20 14145513 14145646 -58008236 - AluSg SINE Alu -176 134 1 195 100 0 0 chr20 14145689 14145719 -58008163 + (A)n Simple_repeat Simple_repeat 1 30 0 1924 122 49 0 chr20 14145746 14146034 -58007848 + AluSx SINE Alu 1 302 -10 354 346 6 0 chr20 14146870 14147099 -58006783 + G-rich Low_complexity Low_complexity 1 230 0 217 349 0 0 chr20 14147528 14147614 -58006268 - MIR3 SINE MIR -16 192 107 402 234 76 38 chr20 14147847 14148031 -58005851 - MER20 DNA MER1_type 0 219 29 2356 57 3 13 chr20 14152194 14152493 -58001389 - AluY SINE Alu -15 296 1 2349 82 0 7 chr20 14153064 14153367 -58000515 - AluY SINE Alu -10 301 1 2284 93 13 0 chr20 14153395 14153696 -58000186 + AluSp SINE Alu 1 305 -8 395 222 139 20 chr20 14153696 14153726 -58000156 - L1MB5 LINE L1 -11 6169 6144 1527 193 34 14 chr20 14153726 14154022 -57999860 - AluJo SINE Alu -10 302 1 395 222 139 20 chr20 14154022 14154041 -57999841 - L1MB5 LINE L1 -36 6144 6129 1999 135 7 0 chr20 14154041 14154344 -57999538 - AluSx SINE Alu -7 305 1 395 222 139 20 chr20 14154344 14154475 -57999407 - L1MB5 LINE L1 -51 6129 5990 1172 161 16 0 chr20 14154680 14154873 -57999009 + AluJo SINE Alu 5 200 -112 1090 295 61 14 chr20 14154889 14155333 -57998549 - L1MB5 LINE L1 -197 5977 5513 348 248 206 21 chr20 14155458 14155599 -57998283 - MER5B DNA MER1_type -4 174 8 372 299 48 0 chr20 14155802 14155949 -57997933 + MER45A DNA AcHobo 1 154 -24 1878 122 32 0 chr20 14157357 14157636 -57996246 + AluJo SINE Alu 5 292 -20 2320 80 13 0 chr20 14157642 14157941 -57995941 + AluSg SINE Alu 1 303 -7 2070 113 0 3 chr20 14159030 14159323 -57994559 - AluSx SINE Alu -19 293 2 180 0 0 0 chr20 14160184 14160204 -57993678 + (A)n Simple_repeat Simple_repeat 1 20 0 199 321 27 9 chr20 14160902 14161014 -57992868 + L2 LINE L2 2563 2676 -638 212 240 16 50 chr20 14161877 14161998 -57991884 + C-rich Low_complexity Low_complexity 3 119 0 23 33 0 0 chr20 14162328 14162358 -57991524 + GC_rich Low_complexity Low_complexity 1 30 0 208 143 0 0 chr20 14162774 14162809 -57991073 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 246 305 110 0 chr20 14164619 14164701 -57989181 + MIR SINE MIR 51 141 -121 1826 228 23 13 chr20 14265198 14265668 -57888214 + MER65B-int LTR ERV1 4397 4871 0 424 143 0 204 chr20 14265668 14265737 -57888145 + MER65B LTR ERV1 1 26 -505 1834 116 15 0 chr20 14265737 14265996 -57887886 + AluSg SINE Alu 1 263 -47 424 143 0 204 chr20 14265996 14266073 -57887809 + MER65B LTR ERV1 26 117 -414 2606 167 50 2 chr20 14266073 14266588 -57887294 - LTR9B LTR ERV1 0 644 105 2407 81 0 0 chr20 14266628 14266935 -57886947 - AluSq SINE Alu -5 308 2 1364 209 54 0 chr20 14266966 14267282 -57886600 + MER65A LTR ERV1 113 445 0 439 304 112 47 chr20 14267282 14267376 -57886506 + HAL1 LINE L1 2083 2169 -338 1959 133 3 3 chr20 14267376 14267669 -57886213 + AluSx SINE Alu 1 293 -19 2561 55 0 3 chr20 14267673 14267985 -57885897 + AluY SINE Alu 1 311 0 439 304 112 47 chr20 14267985 14268099 -57885783 + HAL1 LINE L1 2171 2310 -197 705 200 36 0 chr20 14269833 14269998 -57883884 - MER20 DNA MER1_type -46 173 3 932 204 164 13 chr20 14271707 14272025 -57881857 - MLT1D LTR MaLR -5 500 135 1709 159 3 21 chr20 14272132 14272421 -57881461 - AluJb SINE Alu -28 284 1 584 204 80 0 chr20 14272425 14272586 -57881296 + Charlie2 DNA MER1_type 2607 2780 -82 950 209 45 126 chr20 14272586 14272907 -57880975 + MER89 LTR ERV1 3 270 -289 2104 118 0 7 chr20 14272907 14273211 -57880671 - AluSx SINE Alu -10 302 1 950 209 45 126 chr20 14273211 14273397 -57880485 + MER89 LTR ERV1 270 469 -90 1804 151 79 19 chr20 14273990 14274308 -57879574 - MER1B DNA MER1_type 0 337 1 953 108 0 0 chr20 14274496 14274644 -57879238 + L1P LINE L1 1768 1915 -4231 879 277 69 0 chr20 14275428 14275746 -57878136 + L1 LINE L1 4930 5269 -877 2035 140 17 0 chr20 14275748 14276048 -57877834 - AluSx SINE Alu -7 305 1 847 137 0 30 chr20 14276059 14276190 -57877692 - FLAM_C SINE Alu -16 127 1 2162 111 0 13 chr20 14276200 14276498 -57877384 - AluSx SINE Alu -18 294 1 1271 151 120 4 chr20 14276614 14276871 -57877011 - AluJb SINE Alu 0 316 34 257 349 106 23 chr20 14277701 14277924 -57875958 + L1M4 LINE L1 3414 3617 -2529 2156 105 3 0 chr20 14277924 14278218 -57875664 + AluSp SINE Alu 1 295 -18 257 349 106 23 chr20 14278218 14278381 -57875501 + L1M4 LINE L1 3617 3832 -2314 2384 80 0 0 chr20 14278424 14278725 -57875157 + AluSx SINE Alu 6 306 -6 197 326 146 0 chr20 14279636 14279725 -57874157 - MIR SINE MIR -75 187 86 210 274 16 70 chr20 14281290 14281476 -57872406 + (AGATG)n Simple_repeat Simple_repeat 2 177 0 236 238 30 67 chr20 14281939 14282103 -57871779 + (AGATG)n Simple_repeat Simple_repeat 2 159 0 294 228 44 50 chr20 14282136 14282316 -57871566 + (AGATG)n Simple_repeat Simple_repeat 2 180 0 349 297 116 62 chr20 14283825 14284084 -57869798 + HAL1b LINE L1 537 809 -539 223 143 0 0 chr20 14284988 14285023 -57868859 - MIR SINE MIR -115 147 113 406 281 65 0 chr20 14285457 14285602 -57868280 + MER63 DNA MER1_type 27 1657 -31 1927 130 14 7 chr20 14285816 14286109 -57867773 - AluSx SINE Alu -17 295 1 519 230 72 29 chr20 14286112 14286251 -57867631 - MLT1G1 LTR MaLR -7 588 439 21 0 0 0 chr20 14286641 14286662 -57867220 + AT_rich Low_complexity Low_complexity 1 21 0 603 241 110 62 chr20 14287478 14287863 -57866019 + MLT1E2 LTR MaLR 63 435 -158 1863 267 65 18 chr20 14287916 14288533 -57865349 - L1MB5 LINE L1 0 6174 5529 201 204 0 47 chr20 14288745 14288874 -57865008 + (CCCCAG)n Simple_repeat Simple_repeat 1 122 0 419 258 210 36 chr20 14289177 14289506 -57864376 + MLT1C LTR MaLR 51 436 -31 2142 129 7 0 chr20 14290113 14290422 -57863460 + AluSx SINE Alu 1 311 -1 429 81 0 0 chr20 14290434 14290496 -57863386 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 267 243 27 0 chr20 14291030 14291104 -57862778 + Ricksha DNA DNA 8 83 -1963 978 180 69 69 chr20 14291114 14291308 -57862574 + Ricksha DNA DNA 2925 3122 -132 2286 69 7 0 chr20 14291308 14291619 -57862263 - AluY SINE Alu 0 313 1 978 180 69 69 chr20 14291619 14291728 -57862154 + Ricksha DNA DNA 3121 3229 -25 861 141 0 22 chr20 14292089 14292224 -57861658 + FLAM_C SINE Alu 1 132 -1 216 369 15 15 chr20 14292825 14292955 -57860927 + MIR SINE MIR 7 136 -126 3911 132 29 19 chr20 14293357 14293986 -57859896 + MER41B LTR ERV1 1 635 0 208 231 19 0 chr20 14294531 14294583 -57859299 - L2 LINE L2 -5 3267 3215 192 246 159 44 chr20 14294698 14294909 -57858973 - L2 LINE L2 -312 3001 2766 679 221 39 11 chr20 14296070 14296251 -57857631 + L1M3 LINE L1 5431 5616 -555 1297 209 4 0 chr20 14296251 14296505 -57857377 + AluJo SINE Alu 1 255 -57 2254 102 0 0 chr20 14297043 14297348 -57856534 + AluSx SINE Alu 1 305 -7 261 179 15 30 chr20 14298251 14298318 -57855564 + L1M3 LINE L1 5587 5652 -531 397 338 20 0 chr20 14300771 14300919 -57852963 + MER5B DNA MER1_type 10 160 -18 226 323 52 0 chr20 14301171 14301267 -57852615 - MLT1D LTR MaLR 0 505 405 271 260 0 52 chr20 14301400 14301477 -57852405 - MLT1D LTR MaLR -349 156 84 238 277 54 1 chr20 14302839 14303030 -57850852 - MER31B LTR ERV1 0 466 243 2429 87 0 0 chr20 14303770 14304082 -57849800 + AluSq SINE Alu 1 312 -1 303 108 0 124 chr20 14305464 14305650 -57848232 + (CAGGG)n Simple_repeat Simple_repeat 3 165 0 318 110 16 110 chr20 14305722 14305913 -57847969 + (CAGGG)n Simple_repeat Simple_repeat 3 175 0 194 202 258 0 chr20 14306931 14307020 -57846862 - MIR3 SINE MIR -50 158 47 235 150 33 33 chr20 14307232 14307292 -57846590 + L1MB3 LINE L1 6124 6183 0 2037 124 13 3 chr20 14307301 14307424 -57846458 + AluSq SINE Alu 1 121 -192 306 0 0 0 chr20 14307424 14307458 -57846424 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2037 124 13 3 chr20 14307458 14307641 -57846241 + AluSq SINE Alu 121 310 -3 189 0 0 0 chr20 14307888 14307909 -57845973 + (CA)n Simple_repeat Simple_repeat 2 22 0 741 272 120 0 chr20 14307918 14308260 -57845622 + MLT1B LTR MaLR 2 384 -6 557 231 69 107 chr20 14309168 14309514 -57844368 + MLT1B LTR MaLR 6 338 -52 368 351 7 13 chr20 14310706 14310860 -57843022 + (CACG)n Simple_repeat Simple_repeat 2 154 0 198 302 0 63 chr20 14310928 14310991 -57842891 - MIR SINE MIR -105 103 45 1429 234 80 12 chr20 14311811 14312222 -57841660 + L1MB3 LINE L1 5444 5882 -301 227 203 78 16 chr20 14312234 14312298 -57841584 - MLT1H LTR MaLR -42 507 440 2305 195 130 33 chr20 14312839 14313250 -57840632 + L1MC1 LINE L1 1399 1769 -4627 1630 176 69 0 chr20 14313250 14313540 -57840342 - AluJo SINE Alu -2 310 1 2305 195 130 33 chr20 14313540 14313694 -57840188 + L1MC1 LINE L1 1769 1907 -4489 1739 140 72 0 chr20 14313694 14313973 -57839909 + AluJo SINE Alu 5 303 -9 2305 195 130 33 chr20 14313973 14314348 -57839534 + L1MC1 LINE L1 1907 2387 -4009 1856 119 18 0 chr20 14314348 14314655 -57839227 + AluSx SINE Alu 1 312 0 2305 195 130 33 chr20 14314655 14314801 -57839081 + L1MC1 LINE L1 2387 2517 -3879 389 226 128 0 chr20 14314807 14314909 -57838973 - L1M4 LINE L1 -1628 4518 4404 892 264 78 0 chr20 14315579 14315912 -57837970 + L1MC1 LINE L1 4807 5165 -1050 706 173 0 0 chr20 14315920 14316030 -57837852 + FLAM_C SINE Alu 3 112 -31 186 43 0 0 chr20 14316030 14316053 -57837829 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4794 177 38 26 chr20 14316071 14317278 -57836604 + L1MC1 LINE L1 5180 6401 -1 186 330 85 51 chr20 14317496 14317790 -57836092 - L2 LINE L2 -100 3172 2869 378 204 0 87 chr20 14318189 14318431 -57835451 + G-rich Low_complexity Low_complexity 1 221 0 240 116 23 0 chr20 14323221 14323264 -57830618 + MLT1G1 LTR MaLR 545 588 -7 1765 114 70 0 chr20 14323791 14324063 -57829819 + AluSq SINE Alu 1 291 -22 674 182 147 0 chr20 14326096 14326294 -57827588 + MER21A LTR ERV1 38 264 -667 1099 200 154 0 chr20 14326300 14326605 -57827277 + MER21A LTR ERV1 580 931 0 560 236 32 24 chr20 14428040 14428481 -57725401 - BSR/Beta Satellite Satellite -280 444 1 328 354 26 5 chr20 14428530 14428746 -57725136 - BSR/Beta Satellite Satellite -100 220 1 693 248 19 51 chr20 14428852 14431115 -57722767 - BSR/Beta Satellite Satellite -16 2189 1 1228 277 32 13 chr20 14431236 14432492 -57721390 - BSR/Beta Satellite Satellite -2 1881 273 2083 138 0 0 chr20 14432492 14432804 -57721078 + AluSx SINE Alu 1 312 0 1228 277 32 13 chr20 14432804 14433083 -57720799 - BSR/Beta Satellite Satellite -1610 273 1 752 231 5 22 chr20 14433097 14433893 -57719989 - BSR/Beta Satellite Satellite -49 782 1 1798 258 11 23 chr20 14433950 14435248 -57718634 - BSR/Beta Satellite Satellite -1 1820 195 1854 142 82 23 chr20 14435248 14435600 -57718282 - THE1C LTR MaLR 0 375 3 1798 258 11 23 chr20 14435600 14435793 -57718089 - BSR/Beta Satellite Satellite -1626 195 1 269 245 57 28 chr20 14435903 14436009 -57717873 - BSR/Beta Satellite Satellite -30 122 14 716 224 4 48 chr20 14436032 14436928 -57716954 - BSR/Beta Satellite Satellite -22 856 1 498 213 0 60 chr20 14436963 14437169 -57716713 - BSR/Beta Satellite Satellite -1 193 1 264 308 66 17 chr20 14437276 14437443 -57716439 - BSR/Beta Satellite Satellite -15 175 1 337 174 42 21 chr20 14437582 14437726 -57716156 + CT-rich Low_complexity Low_complexity 2 148 0 578 142 47 27 chr20 14437867 14438201 -57715681 + CT-rich Low_complexity Low_complexity 1 340 0 219 114 0 68 chr20 14438203 14438247 -57715635 + (TCTCC)n Simple_repeat Simple_repeat 4 44 0 424 205 29 38 chr20 14438252 14439009 -57714873 + CT-rich Low_complexity Low_complexity 1 750 0 1058 193 83 9 chr20 14439163 14439422 -57714460 - AluJb SINE Alu 0 316 41 5926 44 2 0 chr20 14440699 14441773 -57712109 - L1PA4 LINE L1 -416 5739 4665 3358 51 2 0 chr20 14441773 14442185 -57711697 + L1PA4 LINE L1 5740 6152 -3 2164 64 13 24 chr20 14442873 14443171 -57710711 + AluY SINE Alu 1 295 -16 235 224 12 118 chr20 14443560 14443645 -57710237 - L2 LINE L2 0 3272 3197 1601 160 4 0 chr20 14443666 14443916 -57709966 + AluSx SINE Alu 1 251 -61 2883 163 66 10 chr20 14443951 14444448 -57709434 + MER1A DNA MER1_type 3 527 0 185 161 0 0 chr20 14445079 14445110 -57708772 + MIR SINE MIR 159 189 -73 369 263 0 0 chr20 14445226 14445302 -57708580 + MER20 DNA MER1_type 84 159 -60 2007 102 0 36 chr20 14445752 14446056 -57707826 + AluSq SINE Alu 4 296 -17 1858 86 23 154 chr20 14446684 14447080 -57706802 + LTR14B LTR ERVK 1 608 0 5824 73 17 8 chr20 14447080 14447856 -57706026 + HERVK14 LTR ERVK 1 783 -5162 8240 103 26 6 chr20 14447894 14449063 -57704819 + HERV17 LTR ERV1 824 2016 -6610 * 9733 81 33 15 chr20 14449046 14450473 -57703409 + HERV17 LTR ERV1 2430 5553 -3073 367 41 0 0 chr20 14450472 14450521 -57703361 + HERV17 LTR ERV1 433 481 -8145 * 3300 71 28 7 chr20 14450521 14451165 -57702717 + HERVK14 LTR ERVK 5038 5764 -181 319 179 0 18 chr20 14451166 14451222 -57702660 + MER41C LTR ERV1 7 61 -493 700 60 45 135 chr20 14451222 14451355 -57702527 + HERVK14 LTR ERVK 5822 5942 -3 231 67 67 44 chr20 14451360 14451405 -57702477 + LTR14B LTR ERVK 1 46 -562 * 1889 112 140 25 chr20 14451393 14451750 -57702132 + LTR14B LTR ERVK 211 608 0 192 261 15 46 chr20 14451799 14451864 -57702018 - L2 LINE L2 -216 3056 2994 187 333 30 15 chr20 14452654 14452720 -57701162 - L3 LINE CR1 -98 1479 1413 1419 109 0 0 chr20 14454480 14454673 -57699209 + MER9 LTR ERVK 1 193 -318 1938 134 10 10 chr20 14456490 14456780 -57697102 - AluSq SINE Alu -19 294 5 784 168 0 42 chr20 14457039 14457182 -57696700 + FLAM_C SINE Alu 7 143 0 882 116 8 0 chr20 14457353 14457474 -57696408 + AluSp SINE Alu 1 122 -191 2114 119 17 3 chr20 14457654 14457956 -57695926 - AluSq SINE Alu -7 306 1 236 291 93 35 chr20 14458060 14458232 -57695650 + Charlie8 DNA MER1_type 7 188 -2229 203 286 124 38 chr20 14458522 14458627 -57695255 + MIR SINE MIR 30 143 -65 1940 140 39 0 chr20 14458776 14459061 -57694821 - AluSx SINE Alu -16 296 1 2150 130 22 3 chr20 14459566 14459882 -57694000 + MER9 LTR ERVK 190 511 0 271 306 56 35 chr20 14460393 14460537 -57693345 - MIR SINE MIR -8 254 108 2256 81 30 7 chr20 14461514 14461812 -57692070 + AluY SINE Alu 1 305 -6 360 266 79 62 chr20 14463189 14463325 -57690557 + L1ME LINE L1 5293 5435 -2373 1747 144 61 0 chr20 14463325 14463639 -57690243 + AluSg SINE Alu 3 332 0 360 266 79 62 chr20 14463639 14463678 -57690204 + L1ME LINE L1 5435 5472 -2336 2042 134 0 0 chr20 14463836 14464127 -57689755 + AluY SINE Alu 2 292 -19 908 225 32 46 chr20 14464184 14464468 -57689414 - LTR9 LTR ERV1 0 612 333 21357 70 0 3 chr20 14464471 14467192 -57686690 + L1P LINE L1 2 2716 -3430 1035 17 0 0 chr20 14467292 14467410 -57686472 + L1P LINE L1 2708 2825 -3321 29 0 0 0 chr20 14517632 14517661 -57636221 + AT_rich Low_complexity Low_complexity 1 29 0 2128 103 14 0 chr20 14517661 14517942 -57635940 - AluSg SINE Alu -25 285 1 2073 130 10 0 chr20 14517944 14518236 -57635646 - AluSx SINE Alu -17 295 1 926 234 19 5 chr20 14518246 14518451 -57635431 - MIR SINE MIR -13 249 42 362 61 0 0 chr20 14518551 14518600 -57635282 - Alu SINE Alu -247 54 6 1020 140 34 34 chr20 14518623 14518802 -57635080 + AluJo SINE Alu 1 179 -133 815 201 22 16 chr20 14519107 14519291 -57634591 + MER20 DNA MER1_type 1 185 -34 2274 96 0 13 chr20 14519296 14519597 -57634285 + AluSq SINE Alu 3 299 -14 202 231 0 15 chr20 14520498 14520563 -57633319 + (TA)n Simple_repeat Simple_repeat 2 65 0 226 258 38 13 chr20 14521347 14521427 -57632455 - AluJ/monomer SINE Alu -252 56 2 292 239 77 43 chr20 14523072 14523189 -57630693 + L1ME LINE L1 5504 5624 -497 29 28 0 0 chr20 14523306 14523342 -57630540 + AT_rich Low_complexity Low_complexity 1 36 0 915 262 75 43 chr20 14523352 14523726 -57630156 - L2 LINE L2 0 3313 2928 2110 208 17 17 chr20 14524004 14524637 -57629245 - L1MC/D LINE L1 -642 5691 5057 649 287 64 64 chr20 14525494 14526038 -57627844 + L1PA14 LINE L1 5289 5832 -329 * 2114 230 83 10 chr20 14525613 14526212 -57627670 + L1ME2 LINE L1 5391 6033 -131 302 312 21 28 chr20 14526475 14526616 -57627266 - L1MC/D LINE L1 -2301 3845 3706 30 69 0 0 chr20 14526788 14526846 -57627036 + AT_rich Low_complexity Low_complexity 1 58 0 24 32 0 0 chr20 14527502 14527533 -57626349 + GC_rich Low_complexity Low_complexity 1 31 0 206 105 26 0 chr20 14527827 14527865 -57626017 + (TA)n Simple_repeat Simple_repeat 2 40 0 3077 160 9 15 chr20 14528285 14528809 -57625073 - Tigger3(Golem) DNA MER2_type 0 3029 2509 2074 132 25 3 chr20 14528809 14529135 -57624747 - L1PA7 LINE L1 -5 6149 5817 783 231 12 0 chr20 14530026 14530186 -57623696 - MLT1E2 LTR MaLR 0 626 465 1331 130 9 9 chr20 14530188 14530443 -57623439 + L1M2 LINE L1 5219 5473 -743 2017 103 4 7 chr20 14530455 14530736 -57623146 + AluSq SINE Alu 1 280 -33 234 116 0 0 chr20 14530740 14530783 -57623099 + (TTAA)n Simple_repeat Simple_repeat 1 43 0 286 214 40 113 chr20 14531100 14531217 -57622665 + MER5B DNA MER1_type 66 161 -17 2258 112 7 0 chr20 14531220 14531525 -57622357 + AluSx SINE Alu 1 307 -5 222 278 0 42 chr20 14532041 14532113 -57621769 + GA-rich Low_complexity Low_complexity 4 72 0 414 113 42 0 chr20 14533527 14533598 -57620284 - L1MA3 LINE L1 0 6305 6232 960 245 86 8 chr20 14533851 14534222 -57619660 - L1M4 LINE L1 -886 6071 5672 991 183 0 6 chr20 14534222 14534397 -57619485 + AluJb SINE Alu 122 295 -17 1061 259 31 13 chr20 14534422 14534851 -57619031 - L1MEc LINE L1 -3668 3289 2897 5000 85 15 0 chr20 14535138 14535797 -57618085 - L1PA4 LINE L1 -74 6081 5413 201 268 40 101 chr20 14535838 14536022 -57617860 - L2 LINE L2 -919 2395 2222 3227 173 72 7 chr20 14536022 14536590 -57617292 - MER6A DNA MER2_type 0 605 1 201 268 40 101 chr20 14536590 14536603 -57617279 - L2 LINE L2 -1092 2222 2210 416 125 0 62 chr20 14536710 14536822 -57617060 - MER96B DNA MER1_type? -234 183 79 354 164 20 13 chr20 14536817 14536888 -57616994 - AluJ/FLAM SINE Alu -245 57 2 * 353 357 80 30 chr20 14537258 14537622 -57616260 - HERV16 LTR ERVL -1907 3089 2708 746 174 7 43 chr20 14537677 14537815 -57616067 + FLAM_C SINE Alu 1 133 0 344 290 65 0 chr20 14537951 14538058 -57615824 - L1MEc LINE L1 -6543 316 203 397 289 35 35 chr20 14538834 14539007 -57614875 + MER20B DNA MER1_type 2 174 -609 189 0 0 0 chr20 14539141 14539162 -57614720 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 441 0 0 0 chr20 14539161 14539210 -57614672 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 204 0 0 chr20 14539827 14539881 -57614001 + FAM SINE Alu 125 178 -1 765 283 107 4 chr20 14541409 14541681 -57612201 - L1MC4a LINE L1 -1933 5875 5576 1718 130 4 8 chr20 14542175 14542429 -57611453 - AluSx SINE Alu -59 253 1 2254 96 7 0 chr20 14542675 14542968 -57610914 - AluSx SINE Alu -17 295 1 974 168 12 6 chr20 14542970 14543131 -57610751 - FRAM SINE Alu -4 162 1 465 19 0 0 chr20 14543780 14543834 -57610048 + (CA)n Simple_repeat Simple_repeat 2 55 0 416 275 191 8 chr20 14543893 14544024 -57609858 + MER91A DNA MER1_type 4 158 -38 2882 196 21 19 chr20 14544672 14545692 -57608190 - L1 LINE L1 -3325 4240 3217 341 121 143 33 chr20 14545986 14546077 -57607805 + AluJb SINE Alu 34 134 -168 1871 161 0 7 chr20 14546081 14546373 -57607509 + AluJo SINE Alu 1 290 -22 1937 99 4 0 chr20 14546720 14546973 -57606909 + AluSp SINE Alu 1 254 -59 341 238 12 94 chr20 14547120 14547280 -57606602 - MLT1B LTR MaLR -81 309 163 1340 124 16 5 chr20 14547280 14547474 -57606408 + AluSx SINE Alu 1 196 -116 590 84 0 48 chr20 14547474 14547557 -57606325 + AluSq/x SINE Alu 63 141 -172 2373 103 0 0 chr20 14547751 14548063 -57605819 - AluSq SINE Alu -1 312 1 1970 311 64 39 chr20 14550105 14550963 -57602919 - MER45C DNA AcHobo -65 888 9 12828 45 1 8 chr20 14552433 14554094 -57599788 - L1P LINE L1 -2456 3690 2042 1985 177 10 65 chr20 14554183 14554596 -57599286 + MLT1B LTR MaLR 1 390 0 206 324 29 19 chr20 14554675 14554780 -57599102 + L2 LINE L2 3193 3298 -15 12614 97 7 2 chr20 14555002 14556794 -57597088 + L1PA3 LINE L1 614 2414 -3732 459 115 85 46 chr20 14557047 14557177 -57596705 - ALR/Alpha Satellite centromeric 0 172 38 5150 65 33 17 chr20 14557182 14558428 -57595454 + L1PA3 LINE L1 4748 6015 -140 253 214 26 82 chr20 14558795 14558951 -57594931 - MIR SINE MIR -52 156 5 915 86 0 79 chr20 14558981 14559121 -57594761 + AluSq/x SINE Alu 12 140 -173 239 189 113 0 chr20 14559134 14559187 -57594695 + MIR3 SINE MIR 118 176 -32 1556 87 29 0 chr20 14559345 14559577 -57594305 + AluSg/x SINE Alu 72 309 0 191 313 36 12 chr20 14560757 14560840 -57593042 - MIR SINE MIR -75 133 49 2054 104 13 25 chr20 14561048 14561364 -57592518 - AluSx SINE Alu 0 312 1 627 146 24 57 chr20 14561388 14561511 -57592371 - FLAM_C SINE Alu -16 127 9 2517 221 29 85 chr20 14561693 14562423 -57591459 - L1MCa LINE L1 -5715 711 23 1083 183 32 44 chr20 14562492 14562860 -57591022 - MLT2A2 LTR ERVL 0 453 178 8396 47 1 0 chr20 14563112 14564141 -57589741 + L1P LINE L1 4369 5398 -748 508 109 48 30 chr20 14564339 14564504 -57589378 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 201 204 20 0 chr20 14564521 14564570 -57589312 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 1592 124 104 4 chr20 14565093 14565352 -57588530 - AluJo SINE Alu -25 287 3 2203 123 0 3 chr20 14565911 14566220 -57587662 + AluSx SINE Alu 2 309 -3 1166 122 6 0 chr20 14566386 14566550 -57587332 - AluJb SINE Alu -13 299 135 312 258 245 12 chr20 14566553 14566716 -57587166 + MIR SINE MIR 36 236 -26 187 259 74 56 chr20 14566791 14566899 -57586983 - L2 LINE L2 -35 3278 3169 2575 37 0 3 chr20 14567866 14568164 -57585718 - AluY SINE Alu -14 297 1 310 221 158 11 chr20 14568923 14569018 -57584864 - MIR SINE MIR -109 153 45 8252 63 3 0 chr20 14569274 14570321 -57583561 - L1P LINE L1 -3425 2721 1672 408 179 0 0 chr20 14571064 14571131 -57582751 - MLT1A1 LTR MaLR -3 362 296 843 119 0 0 chr20 14571131 14571240 -57582642 + AluSq/x SINE Alu 9 117 -196 1032 118 34 92 chr20 14571242 14571338 -57582544 - MLT1A1 LTR MaLR -148 217 117 972 115 0 0 chr20 14571338 14571460 -57582422 - FLAM_C SINE Alu -11 122 1 1032 118 34 92 chr20 14571460 14571616 -57582266 - MLT1A1 LTR MaLR -248 117 1 233 343 0 56 chr20 14572024 14572202 -57581680 - L3 LINE CR1 -28 1549 1382 191 229 297 8 chr20 14572659 14572777 -57581105 + L2 LINE L2 1985 2136 -1178 185 340 25 25 chr20 14572810 14572969 -57580913 + L2 LINE L2 2413 2571 -743 5811 150 44 16 chr20 14573070 14574096 -57579786 + MER11C LTR ERVK 3 1057 -14 846 193 0 0 chr20 14574115 14574276 -57579606 - ALR/Alpha Satellite centromeric -4 168 8 2081 127 3 0 chr20 14574689 14575027 -57578855 + AluSq SINE Alu 1 339 0 563 0 0 15 chr20 14575380 14575448 -57578434 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 1690 155 48 7 chr20 14575540 14575831 -57578051 + AluSq SINE Alu 1 303 -10 1913 119 31 0 chr20 14576397 14576683 -57577199 - AluSx SINE Alu -17 295 1 1030 221 54 0 chr20 14576691 14576913 -57576969 - MIR SINE MIR -21 241 8 536 221 97 15 chr20 14576928 14577123 -57576759 + MIR SINE MIR 17 227 -35 4934 112 6 1 chr20 14577305 14578003 -57575879 - L1P LINE L1 -5437 709 9 1165 144 6 2 chr20 14578006 14580012 -57573870 + ALR/Alpha Satellite centromeric 1 2012 -1 1187 151 5 5 chr20 14580023 14589057 -57564825 + ALR/Alpha Satellite centromeric 1 9033 -60 23252 53 7 0 chr20 14589157 14592092 -57561790 + L1PA4 LINE L1 1209 4161 -1985 6204 48 1 6 chr20 14592092 14592813 -57561069 + L1PA4 LINE L1 5436 6155 0 1067 178 7 2 chr20 14592813 14594615 -57559267 + ALR/Alpha Satellite centromeric 1 1809 -31 1134 160 7 5 chr20 14594715 14596666 -57557216 + ALR/Alpha Satellite centromeric 1 1954 -7 962 183 5 1 chr20 14596681 14597240 -57556642 + ALR/Alpha Satellite centromeric 1 561 -32 935 174 10 2 chr20 14597281 14597774 -57556108 + ALR/Alpha Satellite centromeric 1 496 -56 1089 178 5 2 chr20 14597890 14599255 -57554627 + ALR/Alpha Satellite centromeric 1 1368 -27 1116 172 8 1 chr20 14599423 14601825 -57552057 + ALR/Alpha Satellite centromeric 1 2417 -4 4777 62 13 0 chr20 14601925 14602653 -57551229 - L1P2 LINE L1 -677 5478 4744 1083 171 9 2 chr20 14602654 14603801 -57550081 + ALR/Alpha Satellite centromeric 1 1155 -6 3165 133 30 8 chr20 14603907 14604576 -57549306 - MER11B LTR ERVK -458 778 1 5225 76 11 0 chr20 14604578 14605305 -57548577 - HERVK11 LTR ERVK -2 7951 7217 1461 101 23 5 chr20 14605297 14605516 -57548366 - HERVK11 LTR ERVK -7524 429 207 * 1839 165 0 6 chr20 14605513 14605835 -57548047 - HERVK11 LTR ERVK -7633 320 1 5712 153 30 17 chr20 14605835 14606892 -57546990 - MER11C LTR ERVK 0 1071 1 840 190 27 0 chr20 14606902 14607166 -57546716 + ALR/Alpha Satellite centromeric 1 271 -71 2220 89 0 3 chr20 14707327 14707632 -57446250 - AluSg1 SINE Alu 0 304 1 1249 227 163 62 chr20 14708225 14708723 -57445159 + MLT1H LTR MaLR 2 549 0 390 279 76 44 chr20 14708728 14708886 -57444996 - MER5B DNA MER1_type -11 167 5 497 283 35 0 chr20 14709418 14709563 -57444319 + LTR16A1 LTR ERVL 4 153 -304 6577 136 70 10 chr20 14709566 14710711 -57443171 - Tigger3b DNA MER2_type 0 1231 1 781 247 124 25 chr20 14710711 14710994 -57442888 + LTR16A1 LTR ERVL 145 455 -2 1059 124 0 0 chr20 14712426 14712603 -57441279 + (GGGGA)n Simple_repeat Simple_repeat 3 179 0 597 158 0 0 chr20 14712606 14712726 -57441156 + G-rich Low_complexity Low_complexity 3 122 0 1462 189 0 63 chr20 14712766 14713084 -57440798 + AluJb SINE Alu 1 298 -14 2101 167 182 55 chr20 14714099 14714238 -57439644 + LTR49 LTR ERV1 1 121 -474 2109 129 3 0 chr20 14714238 14714532 -57439350 + AluSx SINE Alu 1 295 -17 2101 167 182 55 chr20 14714532 14714920 -57438962 + LTR49 LTR ERV1 121 595 0 6326 93 29 8 chr20 14715223 14716252 -57437630 + L1PA13 LINE L1 5106 6163 0 26 50 0 0 chr20 14716252 14716292 -57437590 + AT_rich Low_complexity Low_complexity 1 40 0 632 253 67 6 chr20 14716365 14716543 -57437339 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr20 14716823 14716844 -57437038 + AT_rich Low_complexity Low_complexity 1 21 0 2280 94 0 7 chr20 14717704 14718012 -57435870 - AluSx SINE Alu -6 306 1 541 272 17 13 chr20 14718236 14718416 -57435466 + MIR SINE MIR 35 214 -48 1526 196 34 7 chr20 14718440 14718731 -57435151 + AluJb SINE Alu 4 302 -10 266 336 29 10 chr20 14718855 14718959 -57434923 + MIR3 SINE MIR 91 196 -12 280 223 26 4 chr20 14719135 14719220 -57434662 - L1ME3A LINE L1 -47 6115 6026 1535 200 40 7 chr20 14719323 14719445 -57434437 + AluJb SINE Alu 1 117 -195 252 0 0 0 chr20 14719445 14719473 -57434409 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1535 200 40 7 chr20 14719473 14719650 -57434232 + AluJb SINE Alu 117 310 -2 22 0 0 0 chr20 14720780 14720802 -57433080 + AT_rich Low_complexity Low_complexity 1 22 0 2120 124 3 13 chr20 14721176 14721491 -57432391 + AluSx SINE Alu 1 312 0 2242 110 7 0 chr20 14722406 14722705 -57431177 - AluSc SINE Alu -8 301 1 420 181 165 16 chr20 14722730 14722857 -57431025 + MER5A DNA MER1_type 7 152 -37 543 223 172 6 chr20 14723353 14723510 -57430372 + MER5A DNA MER1_type 4 186 -3 387 269 187 8 chr20 14723523 14723657 -57430225 - MER5B DNA MER1_type -2 176 19 1545 178 68 105 chr20 14723808 14724218 -57429664 - MSTD LTR MaLR 0 396 2 204 328 95 26 chr20 14724220 14724336 -57429546 - MIR SINE MIR -118 144 21 502 249 54 60 chr20 14724808 14724993 -57428889 + MIR SINE MIR 40 223 -39 546 281 27 14 chr20 14725195 14725341 -57428541 + L2 LINE L2 3124 3271 -1 742 272 163 0 chr20 14725489 14725765 -57428117 + MLT1L LTR MaLR 294 614 -1 304 301 112 0 chr20 14725904 14726047 -57427835 - MIR SINE MIR -58 204 46 829 243 11 11 chr20 14729301 14729490 -57424392 + MER5A DNA MER1_type 1 189 0 250 279 77 10 chr20 14729496 14729600 -57424282 + MIR SINE MIR 23 133 -75 470 244 127 141 chr20 14729600 14729967 -57423915 - MLT1H1 LTR MaLR 0 555 195 1232 162 209 50 chr20 14729967 14730226 -57423656 - AluJo SINE Alu -2 300 1 470 244 127 141 chr20 14730226 14730353 -57423529 - MLT1H1 LTR MaLR -360 195 68 298 267 40 0 chr20 14730405 14730480 -57423402 + MIR3 SINE MIR 129 206 -2 246 105 0 0 chr20 14730725 14730763 -57423119 + (ATG)n Simple_repeat Simple_repeat 2 39 0 207 0 0 0 chr20 14730948 14730971 -57422911 + (T)n Simple_repeat Simple_repeat 1 23 0 2393 92 0 0 chr20 14731014 14731317 -57422565 - AluSg SINE Alu -7 303 1 529 290 90 28 chr20 14731357 14731612 -57422270 + MLT1J2 LTR MaLR 180 450 0 250 278 67 0 chr20 14731798 14731888 -57421994 - L2 LINE L2 0 3272 3177 805 85 25 0 chr20 14731994 14732112 -57421770 + BC200 scRNA scRNA 36 156 -44 284 323 46 39 chr20 14732114 14732244 -57421638 - L2 LINE L2 -222 3050 2920 209 184 0 41 chr20 14733027 14733076 -57420806 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 244 297 98 108 chr20 14733089 14733361 -57420521 - L2 LINE L2 -660 2654 2381 2164 130 0 3 chr20 14733361 14733668 -57420214 + AluSx SINE Alu 1 306 -6 244 297 98 108 chr20 14733668 14734004 -57419878 - L2 LINE L2 -933 2381 2052 800 281 164 62 chr20 14734218 14734699 -57419183 - MLT1K LTR MaLR -14 574 45 215 276 0 0 chr20 14734976 14735004 -57418878 + A-rich Low_complexity Low_complexity 5 32 -30 2566 45 7 3 chr20 14735004 14735314 -57418568 + AluY SINE Alu 1 311 0 215 276 0 0 chr20 14735314 14735343 -57418539 + A-rich Low_complexity Low_complexity 31 62 0 189 74 0 0 chr20 14737642 14737669 -57416213 + (T)n Simple_repeat Simple_repeat 1 27 0 2088 120 0 3 chr20 14738196 14738480 -57415402 - AluSq SINE Alu -24 289 7 224 301 45 83 chr20 14739555 14739688 -57414194 - L2 LINE L2 0 3313 3186 324 0 0 0 chr20 14740272 14740308 -57413574 + (TG)n Simple_repeat Simple_repeat 2 37 0 2130 134 3 10 chr20 14742338 14742652 -57411230 - AluSx SINE Alu 0 312 1 1809 212 51 27 chr20 14743388 14743915 -57409967 + L1ME2 LINE L1 5593 6162 0 1129 290 77 5 chr20 14745293 14745672 -57408210 + LTR16C LTR ERVL 80 485 -6 231 336 8 48 chr20 14746407 14746532 -57407350 + MIR3 SINE MIR 68 187 -21 198 91 0 0 chr20 14746575 14746608 -57407274 + (A)n Simple_repeat Simple_repeat 1 33 0 2500 34 14 0 chr20 14747106 14747398 -57406484 + AluY SINE Alu 2 297 -14 21 0 0 0 chr20 14747748 14747769 -57406113 + AT_rich Low_complexity Low_complexity 1 21 0 415 188 0 0 chr20 14747769 14747838 -57406044 - Tigger5 DNA MER2_type 0 2323 2255 375 235 0 24 chr20 14747828 14747913 -57405969 + Tigger5 DNA MER2_type 2238 2320 -3 * 490 182 0 0 chr20 14747913 14747989 -57405893 - Tigger5 DNA MER2_type -2245 78 3 630 293 162 37 chr20 14748020 14748309 -57405573 - L1M4 LINE L1 -1071 5075 4824 1377 218 158 48 chr20 14748309 14748764 -57405118 + MLT1D LTR MaLR 1 505 0 630 293 162 37 chr20 14748764 14749153 -57404729 - L1M4 LINE L1 -1322 4824 4312 234 309 120 43 chr20 14749265 14750677 -57403205 - L1M4 LINE L1 -1956 4190 2671 323 279 90 49 chr20 14750949 14751193 -57402689 - L1M4 LINE L1 -3762 2384 2131 264 307 47 73 chr20 14752014 14752113 -57401769 - MIR SINE MIR -57 205 105 2345 127 19 35 chr20 14752113 14752482 -57401400 - THE1B LTR MaLR -1 363 1 12321 94 13 1 chr20 14752482 14754044 -57399838 - THE1B-int LTR MaLR 0 1580 1 1923 118 109 35 chr20 14754044 14754259 -57399623 - THE1B LTR MaLR 0 364 114 2726 45 0 0 chr20 14754259 14754569 -57399313 + AluY SINE Alu 1 310 -1 1923 118 109 35 chr20 14754569 14754692 -57399190 - THE1B LTR MaLR -250 114 1 264 307 47 73 chr20 14754692 14754740 -57399142 - MIR SINE MIR -154 108 60 783 214 32 32 chr20 14755393 14755580 -57398302 - MER5A DNA MER1_type -2 187 1 242 391 36 0 chr20 14756688 14756798 -57397084 + L2 LINE L2 3143 3256 -16 363 332 73 2 chr20 14756937 14757138 -57396744 - MIR SINE MIR -45 217 6 198 366 57 24 chr20 14757321 14757444 -57396438 - L2 LINE L2 -5 3267 3141 21 0 0 0 chr20 14757744 14757765 -57396117 + AT_rich Low_complexity Low_complexity 1 21 0 1468 218 133 3 chr20 14757959 14758344 -57395538 - MER63B DNA MER1_type 0 436 2 613 65 13 0 chr20 14758364 14758441 -57395441 + MADE1 DNA Mariner 3 80 0 830 244 19 38 chr20 14759000 14759213 -57394669 + MER3 DNA MER1_type 1 209 0 273 98 0 0 chr20 14760226 14760267 -57393615 + (T)n Simple_repeat Simple_repeat 1 41 0 1316 213 47 3 chr20 14760310 14760606 -57393276 - L1ME1 LINE L1 -5 6161 5853 254 325 12 119 chr20 14761287 14761447 -57392435 + MIR3 SINE MIR 63 205 -3 798 168 0 36 chr20 14762236 14762373 -57391509 - FLAM_A SINE Alu -1 132 1 350 148 89 59 chr20 14762572 14762673 -57391209 - MER67C LTR ERV1 0 710 607 2384 190 37 91 chr20 14762771 14763412 -57390470 - MER67C LTR ERV1 -103 607 1 411 289 37 16 chr20 14763615 14763774 -57390108 + MER5B DNA MER1_type 25 177 -1 499 349 17 0 chr20 14763815 14763987 -57389895 + MER5B DNA MER1_type 1 175 -3 2086 94 17 30 chr20 14764008 14764307 -57389575 + AluY SINE Alu 1 295 -16 192 345 108 16 chr20 14764336 14764530 -57389352 + MIR SINE MIR 51 262 0 180 0 0 0 chr20 14764765 14764785 -57389097 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 779 233 16 26 chr20 14764918 14765107 -57388775 - MER5A DNA MER1_type -2 187 1 634 201 189 13 chr20 14765962 14766121 -57387761 + MER53 DNA DNA 2 188 -1 587 221 18 61 chr20 14766488 14766651 -57387231 - MER5B DNA MER1_type -21 157 2 295 323 52 0 chr20 14766716 14766812 -57387070 - MER5A DNA MER1_type -80 109 9 270 0 0 0 chr20 14768266 14768296 -57385586 + (CA)n Simple_repeat Simple_repeat 2 31 0 311 282 161 55 chr20 14768590 14768845 -57385037 + MLT1H LTR MaLR 218 499 -50 453 348 0 18 chr20 14769733 14769897 -57383985 + MER5B DNA MER1_type 17 177 -1 197 307 53 0 chr20 14770080 14770155 -57383727 + MIR3 SINE MIR 98 176 -32 414 330 82 16 chr20 14770947 14771292 -57382590 - L1ME4a LINE L1 -204 5917 5532 1394 232 13 53 chr20 14771436 14771811 -57382071 - LTR16C LTR ERVL 0 491 132 894 231 29 25 chr20 14772077 14772319 -57381563 + L1MEc LINE L1 37 279 -6117 2135 234 79 53 chr20 14772341 14772852 -57381030 + L1MEc LINE L1 336 832 -5564 2078 130 7 3 chr20 14772852 14773159 -57380723 + AluSx SINE Alu 1 308 -4 2135 234 79 53 chr20 14773159 14773334 -57380548 + L1MEc LINE L1 832 1001 -5395 1496 163 38 55 chr20 14773334 14773799 -57380083 + AluJo SINE Alu 1 460 0 2135 234 79 53 chr20 14773799 14773892 -57379990 + L1MEc LINE L1 1001 1090 -5306 2273 101 0 25 chr20 14773892 14774208 -57379674 + AluSg SINE Alu 2 309 -1 2135 234 79 53 chr20 14774208 14774249 -57379633 + L1MEc LINE L1 1090 1180 -5216 657 205 25 59 chr20 14774243 14774488 -57379394 - L1ME4a LINE L1 -785 5361 5159 * 211 365 75 38 chr20 14774513 14774672 -57379210 - MIR SINE MIR -73 189 25 549 80 0 0 chr20 14775150 14775225 -57378657 + (CA)n Simple_repeat Simple_repeat 2 76 0 427 299 61 0 chr20 14775323 14775470 -57378412 - MIR3 SINE MIR -32 176 21 294 302 0 0 chr20 14775842 14775928 -57377954 + MIR SINE MIR 107 192 -70 2062 142 0 3 chr20 14775929 14776238 -57377644 + AluSx SINE Alu 1 308 -4 640 175 0 29 chr20 14776238 14776409 -57377473 + GA-rich Low_complexity Low_complexity 1 166 0 1720 171 0 21 chr20 14776659 14776983 -57376899 + AluJb SINE Alu 1 318 0 22 35 0 0 chr20 14779598 14779627 -57374255 + AT_rich Low_complexity Low_complexity 1 29 0 436 281 84 53 chr20 14779746 14780105 -57373777 + L1MB4 LINE L1 5629 5998 -182 * 1784 223 98 9 chr20 14779793 14780242 -57373640 + L1ME3A LINE L1 5677 6165 -5 379 288 8 8 chr20 14780262 14780394 -57373488 + L1MA10 LINE L1 6177 6308 -26 567 323 50 56 chr20 14780858 14780914 -57372968 - MLT1H LTR MaLR -197 352 297 2222 244 104 2 chr20 14780914 14781406 -57372476 + MLT1F LTR MaLR 1 542 0 567 323 50 56 chr20 14781406 14781652 -57372230 - MLT1H LTR MaLR -252 297 52 1678 207 134 47 chr20 14781653 14781756 -57372126 + MLT1F1 LTR MaLR 3 96 -471 2029 110 0 72 chr20 14781756 14782074 -57371808 - AluSc SINE Alu -14 295 1 1678 207 134 47 chr20 14782074 14782483 -57371399 + MLT1F1 LTR MaLR 96 560 -7 777 319 42 25 chr20 14782531 14783033 -57370849 - LTR67 LTR ERVL -6 551 3 422 292 22 15 chr20 14783132 14783269 -57370613 + MER117 DNA MER1_type 11 148 -49 312 301 216 7 chr20 14784123 14784276 -57369606 - MER5A DNA MER1_type 0 189 5 537 303 25 25 chr20 14784450 14784648 -57369234 - L2 LINE L2 0 3313 3116 2101 149 35 101 chr20 14786091 14786171 -57367711 - Tigger2a DNA MER2_type -2274 434 350 1804 158 3 3 chr20 14786171 14786469 -57367413 - AluJo SINE Alu -6 306 9 2101 149 35 101 chr20 14786469 14786585 -57367297 - Tigger2a DNA MER2_type -2358 350 228 194 0 39 0 chr20 14786585 14786611 -57367271 + (TA)n Simple_repeat Simple_repeat 2 28 0 2101 149 35 101 chr20 14786611 14786870 -57367012 - Tigger2a DNA MER2_type -2480 228 8 313 331 24 0 chr20 14788570 14788694 -57365188 + MER5B DNA MER1_type 4 130 -48 260 222 0 0 chr20 14788733 14788787 -57365095 + MER5B DNA MER1_type 125 178 0 * 964 268 28 24 chr20 14788787 14789035 -57364847 + MIR SINE MIR 9 257 -5 229 234 16 0 chr20 14789048 14789112 -57364770 + L2 LINE L2 2905 2969 -303 197 238 0 48 chr20 14789204 14789267 -57364615 + L2 LINE L2 3162 3221 -92 1535 177 7 11 chr20 14790266 14790543 -57363339 - AluJb SINE Alu 0 312 37 431 259 184 0 chr20 14791217 14791375 -57362507 - MER5A DNA MER1_type 0 189 3 329 302 134 7 chr20 14792450 14792599 -57361283 + MIR SINE MIR 95 262 0 192 222 44 0 chr20 14792629 14792674 -57361208 - L3 LINE CR1 -3 1574 1528 425 221 118 22 chr20 14792677 14792813 -57361069 - MER5A DNA MER1_type -1 188 40 233 259 168 46 chr20 14793167 14793298 -57360584 - L3 LINE CR1 -137 1440 1294 634 290 25 15 chr20 14793355 14793555 -57360327 + MIR SINE MIR 6 207 -55 21 36 0 0 chr20 14794009 14794037 -57359845 + AT_rich Low_complexity Low_complexity 1 28 0 1405 253 85 37 chr20 14794078 14794595 -57359287 + MLT1H LTR MaLR 6 547 -2 219 69 0 0 chr20 14794622 14794651 -57359231 + (CAA)n Simple_repeat Simple_repeat 2 30 0 315 216 27 0 chr20 14794684 14794758 -57359124 + MER116 DNA Mariner 2 77 -3 475 231 107 0 chr20 14794760 14794881 -57359001 - MIR SINE MIR -15 247 114 470 286 103 11 chr20 14795041 14795226 -57358656 - MIR SINE MIR -26 236 35 1849 155 30 82 chr20 14795447 14795814 -57358068 - MER7A DNA MER2_type 0 346 1 430 264 112 35 chr20 14796075 14796272 -57357610 - Charlie8 DNA MER1_type -2118 299 88 370 187 209 50 chr20 14796363 14796502 -57357380 + MER5A DNA MER1_type 1 161 -28 414 214 65 124 chr20 14797685 14797886 -57355996 - MLT1H LTR MaLR -2 547 359 790 256 72 9 chr20 14798083 14798306 -57355576 + LTR16A1 LTR ERVL 199 435 -22 257 262 13 31 chr20 14798415 14798647 -57355235 + CT-rich Low_complexity Low_complexity 1 227 0 221 315 109 11 chr20 14799460 14799552 -57354330 + MIR SINE MIR 25 125 -83 1892 255 69 6 chr20 14799554 14800064 -57353818 + MLT1H LTR MaLR 8 549 0 875 239 5 24 chr20 14800169 14800378 -57353504 - MER3 DNA MER1_type -4 205 1 426 325 75 16 chr20 14801153 14801341 -57352541 + MIR SINE MIR 45 243 -19 704 245 79 105 chr20 14801350 14801816 -57352066 + LTR16A1 LTR ERVL 3 456 -1 280 348 76 43 chr20 14802031 14802241 -57351641 - MER115 DNA AcHobo -260 433 217 509 284 47 0 chr20 14802242 14802390 -57351492 - MER5A DNA MER1_type -4 185 31 1316 175 98 49 chr20 14802592 14803018 -57350864 - MLT1D LTR MaLR 0 505 22 680 182 117 13 chr20 14803858 14804012 -57349870 + L1ME3A LINE L1 6000 6169 -1 1551 121 26 124 chr20 14804016 14804364 -57349518 + AluYb8 SINE Alu 1 314 -4 299 316 76 25 chr20 14804914 14805072 -57348810 + MLT1J2 LTR MaLR 284 449 -1 225 193 35 18 chr20 14805099 14805156 -57348726 - L2 LINE L2 0 3272 3215 300 321 36 15 chr20 14805222 14805359 -57348523 - MIR SINE MIR -25 237 98 272 234 36 81 chr20 14806529 14806640 -57347242 - L2 LINE L2 -1 3271 3166 208 347 80 60 chr20 14806680 14806830 -57347052 + L2 LINE L2 3159 3311 -2 331 200 31 0 chr20 14807003 14807068 -57346814 - L2 LINE L2 0 3313 3247 210 71 0 0 chr20 14807124 14807152 -57346730 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 21 0 0 0 chr20 14807181 14807202 -57346680 + AT_rich Low_complexity Low_complexity 1 21 0 1364 248 54 31 chr20 14807207 14807729 -57346153 - MLT1G LTR MaLR -1 589 57 261 408 41 0 chr20 14807766 14807913 -57345969 - L2 LINE L2 -254 3059 2907 606 265 85 48 chr20 14809406 14809787 -57344095 - MLT1H LTR MaLR 0 549 118 189 277 223 0 chr20 14810119 14810231 -57343651 + MIR SINE MIR 9 145 -117 385 341 38 0 chr20 14810847 14810979 -57342903 - MER91C DNA MER1_type -3 137 1 2190 85 14 3 chr20 14811337 14811630 -57342252 + AluSq SINE Alu 1 296 -17 240 200 0 0 chr20 14811630 14811680 -57342202 + (TA)n Simple_repeat Simple_repeat 1 50 0 270 81 0 0 chr20 14812360 14812397 -57341485 + (T)n Simple_repeat Simple_repeat 1 37 0 816 132 16 0 chr20 14812398 14812527 -57341355 - L1PB1 LINE L1 -3 6148 6018 240 286 159 40 chr20 14812536 14812763 -57341119 - MLT1K LTR MaLR -2 586 333 2106 229 44 51 chr20 14812843 14813394 -57340488 + MLT1H LTR MaLR 3 549 0 2281 118 7 0 chr20 14814255 14814560 -57339322 + AluSc SINE Alu 1 307 -2 345 327 119 0 chr20 14815193 14815361 -57338521 + MLT1H LTR MaLR 130 317 -232 1861 226 61 42 chr20 14815457 14815980 -57337902 - MLT1F LTR MaLR 0 542 10 264 186 0 17 chr20 14816936 14816995 -57336887 + MLT1H LTR MaLR 492 549 0 755 287 116 68 chr20 14817676 14818143 -57335739 - L2 LINE L2 -607 2707 2219 943 251 181 25 chr20 14818147 14818617 -57335265 - MLT1G LTR MaLR -33 557 15 210 260 20 0 chr20 14818631 14818681 -57335201 + L2 LINE L2 3172 3222 -91 385 111 0 28 chr20 14818691 14818763 -57335119 - MLT2B2 LTR ERVL 0 515 446 1345 196 31 42 chr20 14818774 14819060 -57334822 + AluJo SINE Alu 12 294 -18 2632 167 13 4 chr20 14819065 14819521 -57334361 - MLT2B2 LTR ERVL -55 460 1 347 271 45 38 chr20 14819569 14819702 -57334180 - L2 LINE L2 -1100 2214 2081 931 282 41 44 chr20 14819740 14820195 -57333687 + MER115 DNA AcHobo 119 606 -87 398 228 49 0 chr20 14820194 14820317 -57333565 + Zaphod DNA AcHobo 3900 4028 -3 * 502 15 15 15 chr20 14822513 14822581 -57331301 + (TC)n Simple_repeat Simple_repeat 2 69 0 1587 206 93 35 chr20 14822633 14823064 -57330818 + MSTB2 LTR MaLR 2 457 0 1761 189 19 22 chr20 14823937 14824303 -57329579 + MLT1A1 LTR MaLR 1 365 0 925 240 48 56 chr20 14825522 14825897 -57327985 + MLT1H LTR MaLR 1 372 -177 183 279 0 0 chr20 14826811 14826854 -57327028 + MER5B DNA MER1_type 67 109 -69 729 260 62 21 chr20 14827739 14827981 -57325901 - MIR SINE MIR -5 257 6 218 353 0 0 chr20 14828713 14828798 -57325084 + L2 LINE L2 3188 3272 0 26 0 0 0 chr20 14835456 14835482 -57318400 + AT_rich Low_complexity Low_complexity 1 26 0 192 77 0 0 chr20 14839532 14839558 -57314324 + (CTG)n Simple_repeat Simple_repeat 1 26 0 241 247 169 0 chr20 14842327 14842416 -57311466 + MER5A DNA MER1_type 9 112 -77 272 272 10 68 chr20 14842881 14842984 -57310898 + MIR SINE MIR 53 149 -59 600 221 104 64 chr20 14842998 14843247 -57310635 + MER112 DNA MER1_type 2 260 0 582 14 0 0 chr20 14843303 14843376 -57310506 - L1PA3 LINE L1 -3 6152 6080 216 235 0 20 chr20 14843933 14843984 -57309898 - L2 LINE L2 -42 3230 3181 357 324 71 24 chr20 14844213 14844383 -57309499 - MIR3 SINE MIR -25 183 6 233 188 149 117 chr20 14845115 14845269 -57308613 + MIR SINE MIR 85 243 -19 1185 154 75 0 chr20 14846255 14846469 -57307413 - MER30 DNA MER1_type 0 230 1 511 240 0 40 chr20 14846713 14846863 -57307019 + MER104 DNA Tc2 37 180 0 266 26 53 0 chr20 14848134 14848172 -57305710 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1999 105 3 83 chr20 14848647 14848972 -57304910 - AluSq SINE Alu -14 299 1 30 0 0 0 chr20 14849287 14849317 -57304565 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr20 14849592 14849616 -57304266 + AT_rich Low_complexity Low_complexity 1 24 0 2275 113 3 0 chr20 14851374 14851683 -57302199 + AluSx SINE Alu 1 310 -2 180 0 0 0 chr20 14851861 14851881 -57302001 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3812 165 42 9 chr20 14852457 14853251 -57300631 + Charlie1 DNA MER1_type 1589 2408 -353 317 229 153 0 chr20 14853250 14853394 -57300488 + Charlie1 DNA MER1_type 2596 2761 0 * 1903 144 152 8 chr20 14853458 14853832 -57300050 + MSTA LTR MaLR 1 428 0 2211 91 3 3 chr20 14854038 14854325 -57299557 + AluSq SINE Alu 9 295 -18 3873 156 37 9 chr20 14854882 14855619 -57298263 + Tigger2 DNA MER2_type 1 757 -1961 1062 147 59 0 chr20 14855674 14855878 -57298004 + Tigger2 DNA MER2_type 2462 2677 -41 2348 79 0 13 chr20 14856927 14857231 -57296651 + AluY SINE Alu 1 300 -11 609 162 0 18 chr20 14858258 14858369 -57295513 + L1PA8 LINE L1 6052 6160 -12 195 42 0 0 chr20 14858374 14858398 -57295484 + (GAAAA)n Simple_repeat Simple_repeat 5 28 0 28 86 0 0 chr20 14858514 14858584 -57295298 + AT_rich Low_complexity Low_complexity 1 70 0 201 270 112 22 chr20 14859064 14859153 -57294729 - MIR SINE MIR -30 232 136 2475 267 91 68 chr20 14859285 14859754 -57294128 - L2 LINE L2 0 3313 2856 2023 130 3 16 chr20 14859754 14860061 -57293821 - AluSx SINE Alu -9 303 1 2475 267 91 68 chr20 14860061 14860490 -57293392 - L2 LINE L2 -457 2856 2438 397 46 215 0 chr20 14860490 14860555 -57293327 + MADE1 DNA Mariner 2 80 0 2475 267 91 68 chr20 14860555 14860976 -57292906 - L2 LINE L2 -875 2438 1950 799 272 47 0 chr20 14861872 14862104 -57291778 + HAL1 LINE L1 3 245 -2262 236 239 82 75 chr20 14862127 14862286 -57291596 + HAL1 LINE L1 311 470 -2037 293 201 97 75 chr20 14862465 14862599 -57291283 + HAL1 LINE L1 2354 2490 -17 296 247 62 0 chr20 14863567 14863664 -57290218 + L1ME4a LINE L1 5570 5672 -449 260 268 222 13 chr20 14863765 14863918 -57289964 - MIR SINE MIR -66 196 12 336 299 126 25 chr20 14863971 14864249 -57289633 + L1ME4a LINE L1 5803 6108 -13 21 0 0 0 chr20 14864722 14864743 -57289139 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr20 14865100 14865129 -57288753 + AT_rich Low_complexity Low_complexity 1 29 0 432 184 265 0 chr20 14865916 14866052 -57287830 - MER5B DNA MER1_type 0 178 7 505 253 111 137 chr20 14866364 14867150 -57286732 + L1M2 LINE L1 526 1349 -5500 267 288 105 33 chr20 14868260 14868413 -57285469 + MIR SINE MIR 1 164 -98 1740 184 70 3 chr20 14868415 14868758 -57285124 + MLT2D LTR ERVL 1 366 -48 219 69 0 0 chr20 14868788 14868817 -57285065 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 837 214 223 31 chr20 14868824 14869179 -57284703 + LTR54 LTR ERV1 76 510 0 375 96 0 33 chr20 14869182 14869251 -57284631 + MLT2B1 LTR ERVL 398 520 0 184 286 119 24 chr20 14869878 14869962 -57283920 - L2 LINE L2 -1 3312 3221 1582 225 29 53 chr20 14870861 14871315 -57282567 - LTR47B LTR ERVL 0 443 1 21 0 0 0 chr20 14871379 14871400 -57282482 + AT_rich Low_complexity Low_complexity 1 21 0 1855 160 40 109 chr20 14871589 14872038 -57281844 + MER47B DNA MER2_type 1 418 0 2048 117 6 25 chr20 14872372 14872688 -57281194 - AluSg SINE Alu 0 310 1 230 228 0 0 chr20 14872884 14872941 -57280941 - Charlie5 DNA MER1_type -49 2563 2507 7907 73 8 1 chr20 14872941 14874189 -57279693 + L1P3 LINE L1 4291 5547 -607 603 306 48 0 chr20 14874474 14874660 -57279222 + MIR SINE MIR 32 226 -36 511 44 0 0 chr20 14877052 14877120 -57276762 + L1PB3 LINE L1 6085 6152 -2 759 270 141 16 chr20 14877191 14877439 -57276443 + MLT1I LTR MaLR 127 405 -4 1079 230 98 18 chr20 14877493 14877828 -57276054 - MLT1I LTR MaLR -19 390 29 211 341 76 15 chr20 14877855 14877987 -57275895 - MIR SINE MIR -105 157 18 569 266 88 18 chr20 14878144 14878370 -57275512 + MIR SINE MIR 11 252 -10 233 352 0 0 chr20 14878364 14878455 -57275427 - MIR SINE MIR -10 252 162 * 25 0 0 0 chr20 14879293 14879318 -57274564 + AT_rich Low_complexity Low_complexity 1 25 0 224 222 28 14 chr20 14879840 14879855 -57274027 + (TA)n Simple_repeat Simple_repeat 1 14 -968 3794 190 48 24 chr20 14879855 14880732 -57273150 - MER54A LTR ERVL 0 901 4 224 222 28 14 chr20 14880732 14880809 -57273073 + (TA)n Simple_repeat Simple_repeat 14 982 0 1413 206 32 0 chr20 14881598 14881908 -57271974 + L1MB1 LINE L1 5848 6167 -1 2226 112 0 3 chr20 14881966 14882261 -57271621 - AluSq SINE Alu -19 294 1 1375 266 95 27 chr20 14882432 14882946 -57270936 - MLT1H LTR MaLR 0 549 1 1631 248 48 29 chr20 14882957 14883437 -57270445 + MER74B LTR ERVL 57 545 -77 295 211 191 104 chr20 14883710 14883961 -57269921 + MLT1J LTR MaLR 239 511 0 183 243 39 0 chr20 14884540 14884643 -57269239 + CT-rich Low_complexity Low_complexity 2 108 0 382 299 26 0 chr20 14884705 14884822 -57269060 - MER113 DNA MER1_type? -6 515 396 358 269 88 69 chr20 14884843 14885003 -57268879 - HAL1 LINE L1 -30 2477 2315 1472 277 87 28 chr20 14885063 14885593 -57268289 + MLT1F1 LTR MaLR 5 565 -2 300 260 71 25 chr20 14885609 14885805 -57268077 - HAL1 LINE L1 -302 2205 2001 2947 177 36 2 chr20 14885846 14886371 -57267511 + MER44D DNA MER2_type 2 599 -6 509 265 90 30 chr20 14886453 14886721 -57267161 - HAL1 LINE L1 -596 1911 1628 195 288 85 0 chr20 14886852 14886911 -57266971 + L2 LINE L2 3215 3278 -35 202 343 0 0 chr20 14887294 14887364 -57266518 + MIR3 SINE MIR 85 154 -54 1461 233 15 56 chr20 14887779 14887827 -57266055 + MLT1A2 LTR MaLR 1 49 -325 2524 140 44 0 chr20 14887827 14888235 -57265647 + MSTC LTR MaLR 3 428 0 1461 233 15 56 chr20 14888235 14888576 -57265306 + MLT1A2 LTR MaLR 49 374 0 382 349 91 0 chr20 14889026 14889235 -57264647 - MLT1H LTR MaLR -233 316 89 203 61 30 0 chr20 14889436 14889469 -57264413 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1649 153 69 0 chr20 14889489 14889751 -57264131 - AluSx SINE Alu -32 280 1 2092 164 32 57 chr20 14889890 14890360 -57263522 + MLT1C LTR MaLR 1 458 -9 6502 155 14 4 chr20 14890909 14892002 -57261880 - L1PA11 LINE L1 -1752 4394 3291 6143 104 15 0 chr20 14892004 14893750 -57260132 + L1PA11 LINE L1 4408 6174 0 9039 229 27 8 chr20 14894205 14897413 -57256469 + L1PA13 LINE L1 1229 4506 -2291 961 272 48 36 chr20 14897501 14897810 -57256072 + MLT1G LTR MaLR 251 563 -27 32 26 0 0 chr20 14897857 14897896 -57255986 + AT_rich Low_complexity Low_complexity 1 39 0 234 81 0 0 chr20 14898390 14898427 -57255455 + (A)n Simple_repeat Simple_repeat 1 37 0 14325 169 45 24 chr20 14898681 14901448 -57252434 + L1MA4A LINE L1 3411 6309 -1413 2194 58 0 0 chr20 14901448 14901724 -57252158 - L1PA5 LINE L1 0 6154 5879 14325 169 45 24 chr20 14901724 14903168 -57250714 + L1MA4A LINE L1 6309 7722 0 697 291 109 24 chr20 14903284 14903531 -57250351 - MLT1K LTR MaLR -158 430 163 5035 119 71 11 chr20 14903595 14904861 -57249021 + L1PB1 LINE L1 4833 6150 -1 237 317 48 59 chr20 14904952 14905138 -57248744 + L3 LINE CR1 1207 1390 -187 2340 98 0 3 chr20 14906282 14906589 -57247293 + AluSg SINE Alu 1 306 -4 4207 192 54 4 chr20 14906874 14907937 -57245945 - L1MB8 LINE L1 -5 6173 5060 474 227 77 66 chr20 14908225 14908533 -57245349 - MLT1H LTR MaLR -198 351 1 1676 197 0 33 chr20 14908772 14909072 -57244810 + AluJb SINE Alu 1 290 -22 40135 35 27 1 chr20 14909504 14915493 -57238389 + L1PA3 LINE L1 8 6155 0 958 304 64 15 chr20 14916229 14917557 -57236325 - L1ME3A LINE L1 -11 6159 4587 546 100 0 0 chr20 14917615 14917695 -57236187 - THE1C LTR MaLR -54 321 242 493 276 80 67 chr20 14917714 14918225 -57235657 - L1ME3A LINE L1 -1564 4582 4065 867 39 0 0 chr20 14918291 14918393 -57235489 + AluY SINE Alu 192 293 -18 492 236 24 77 chr20 14918393 14918601 -57235281 - L1ME3A LINE L1 -2158 3988 3792 3081 180 39 13 chr20 14918798 14919492 -57234390 - L1MB1 LINE L1 -164 6004 5293 198 0 0 0 chr20 14919544 14919566 -57234316 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6362 201 50 7 chr20 14919568 14921162 -57232720 - L1MB1 LINE L1 -853 5293 3632 2431 223 77 5 chr20 14921170 14921951 -57231931 - L1MB1 LINE L1 -2865 3281 2445 446 332 76 16 chr20 14921964 14922214 -57231668 - L1ME3A LINE L1 -2410 3736 3472 24 0 0 0 chr20 14923086 14923110 -57230772 + AT_rich Low_complexity Low_complexity 1 24 0 1534 104 29 4 chr20 14924916 14925156 -57228726 - MER51A LTR ERV1 0 634 389 507 113 0 153 chr20 14925126 14925250 -57228632 - MER51B LTR ERV1 -272 105 1 * 1293 245 24 73 chr20 14925306 14925812 -57228070 + MLT1E3 LTR MaLR 139 619 -5 396 250 0 75 chr20 14925830 14925950 -57227932 - MER5B DNA MER1_type -67 111 1 496 267 59 30 chr20 14926023 14926158 -57227724 - L2 LINE L2 0 3272 3134 224 318 178 31 chr20 14926713 14926842 -57227040 + MER5B DNA MER1_type 17 164 -14 * 231 294 12 24 chr20 14926837 14926922 -57226960 - L2 LINE L2 -351 2963 2880 279 71 0 0 chr20 14927189 14927231 -57226651 + (A)n Simple_repeat Simple_repeat 1 42 0 757 321 84 24 chr20 14927557 14928008 -57225874 + L2 LINE L2 2832 3309 -4 1529 160 116 73 chr20 14928162 14928575 -57225307 - LTR49 LTR ERV1 -163 432 2 2601 55 0 0 chr20 14929335 14929646 -57224236 - AluY SINE Alu 0 311 1 577 277 11 5 chr20 14929648 14929836 -57224046 - MER5A DNA MER1_type 0 189 1 6956 215 52 58 chr20 14930312 14930494 -57223388 - L1MB1 LINE L1 0 6168 5986 1659 138 85 28 chr20 14930494 14930848 -57223034 + THE1C LTR MaLR 1 374 -1 6956 215 52 58 chr20 14930848 14933056 -57220826 - L1MB1 LINE L1 -182 5986 3766 777 163 0 35 chr20 14933056 14933197 -57220685 - AluJo SINE Alu -176 136 1 6956 215 52 58 chr20 14933197 14933461 -57220421 - L1MB1 LINE L1 -2402 3766 3502 2548 81 43 92 chr20 14933461 14933928 -57219954 - MLT2A1 LTR ERVL 0 444 1 6956 215 52 58 chr20 14933928 14935072 -57218810 - L1MB1 LINE L1 -2666 3502 2276 478 221 16 0 chr20 14935067 14935216 -57218666 + L1MB1 LINE L1 2132 2283 -3863 * 411 313 78 61 chr20 14935319 14935778 -57218104 - L1MC4a LINE L1 -222 5948 5601 260 164 55 0 chr20 14936174 14936229 -57217653 + MLT1G1 LTR MaLR 522 579 -16 374 262 105 24 chr20 14936260 14936470 -57217412 - L1MC4a LINE L1 -580 5590 5364 23 33 0 0 chr20 14936994 14937024 -57216858 + AT_rich Low_complexity Low_complexity 1 30 0 494 311 44 17 chr20 14937663 14937843 -57216039 - MIR SINE MIR -3 259 75 1121 247 60 73 chr20 14937924 14938373 -57215509 + LTR16A1 LTR ERVL 15 457 0 1318 213 118 0 chr20 14938694 14938966 -57214916 + AluJo SINE Alu 5 308 -4 2094 117 18 9 chr20 14939495 14939829 -57214053 - L1PA16 LINE L1 0 6166 5830 387 254 25 110 chr20 14940614 14940850 -57213032 - MLT1H LTR MaLR -155 394 179 1873 157 37 3 chr20 14942250 14942550 -57211332 - AluSx SINE Alu -2 310 1 357 256 23 23 chr20 14942911 14943044 -57210838 - MLT1H LTR MaLR -388 161 29 233 286 29 0 chr20 14943226 14943296 -57210586 + CT-rich Low_complexity Low_complexity 4 75 0 375 260 31 0 chr20 14943327 14943423 -57210459 - L2 LINE L2 -9 3304 3206 549 284 167 18 chr20 14944510 14944792 -57209090 - L2 LINE L2 0 3313 2990 414 296 50 17 chr20 14944891 14945070 -57208812 + LTR16A1 LTR ERVL 168 352 -105 225 240 0 0 chr20 14945131 14945181 -57208701 + LTR16C LTR ERVL 426 475 -16 2231 116 3 0 chr20 14945234 14945536 -57208346 + AluSx SINE Alu 3 305 -7 300 355 36 14 chr20 14945628 14945766 -57208116 + MIR3 SINE MIR 50 190 -18 22 56 0 0 chr20 14946214 14946250 -57207632 + AT_rich Low_complexity Low_complexity 1 36 0 1680 116 18 60 chr20 14946260 14946595 -57207287 - L1MA5A LINE L1 -5 6292 5972 344 237 75 43 chr20 14946913 14947006 -57206876 + MIR SINE MIR 49 144 -118 481 253 50 56 chr20 14947840 14948188 -57205694 - LTR16A1 LTR ERVL -1 456 16 279 331 14 40 chr20 14948577 14948725 -57205157 + MIR SINE MIR 57 200 -62 2251 115 0 0 chr20 14948757 14949061 -57204821 - AluSq SINE Alu -5 308 5 182 284 63 47 chr20 14949616 14949743 -57204139 + MIR SINE MIR 84 212 -50 643 241 29 6 chr20 14951006 14951176 -57202706 - LTR16C LTR ERVL 0 491 318 2805 116 39 77 chr20 14951649 14952182 -57201700 + LTR64 LTR ERVK 1 513 0 286 237 95 37 chr20 14953739 14953929 -57199953 - MER115 DNA AcHobo -242 451 251 1761 210 43 51 chr20 14953967 14954476 -57199406 + MLT1D LTR MaLR 1 505 0 829 229 33 0 chr20 14955771 14955954 -57197928 + MER5A DNA MER1_type 1 189 0 213 154 0 58 chr20 14956119 14956171 -57197711 + A-rich Low_complexity Low_complexity 2 50 0 229 333 36 22 chr20 14956502 14956640 -57197242 + MLT1K LTR MaLR 199 338 -250 1877 239 65 8 chr20 14956813 14957335 -57196547 - L1ME1 LINE L1 -69 6097 5546 551 40 0 13 chr20 14957740 14957815 -57196067 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 252 0 0 0 chr20 14958694 14958722 -57195160 + (TG)n Simple_repeat Simple_repeat 2 29 0 367 252 43 22 chr20 14959139 14959278 -57194604 + LTR16C LTR ERVL 335 476 -15 428 298 49 72 chr20 14961587 14961892 -57191990 - L2 LINE L2 0 3313 3016 734 236 38 45 chr20 14961892 14962145 -57191737 + MLT1G1 LTR MaLR 1 297 -298 598 284 59 75 chr20 14963056 14963507 -57190375 + MLT1L LTR MaLR 16 405 -106 1093 317 54 39 chr20 14963621 14964138 -57189744 - MER115 DNA AcHobo 0 693 169 368 247 129 0 chr20 14964441 14964534 -57189348 + MER69 DNA AcHobo 1 105 -1121 1704 241 99 60 chr20 14964682 14965191 -57188691 + L1MB2 LINE L1 5550 6087 -84 1729 160 0 57 chr20 14965191 14965522 -57188360 - AluJo SINE Alu 0 312 1 1704 241 99 60 chr20 14965522 14965609 -57188273 + L1MB2 LINE L1 6087 6169 -2 883 311 119 7 chr20 14966229 14966657 -57187225 - LTR16C LTR ERVL -10 481 6 1833 191 57 40 chr20 14966713 14967168 -57186714 - MLT1C LTR MaLR -4 463 1 2857 10 0 0 chr20 14967455 14967765 -57186117 + AluYa5 SINE Alu 1 310 -1 409 303 0 106 chr20 14968302 14968510 -57185372 - MER5A DNA MER1_type -2 187 2 707 219 7 19 chr20 14968516 14968671 -57185211 + MER5A DNA MER1_type 4 156 -33 311 193 92 73 chr20 14969121 14969230 -57184652 - L1ME4a LINE L1 -27 6094 5984 217 169 15 31 chr20 14969297 14969362 -57184520 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 198 0 0 0 chr20 14970062 14970084 -57183798 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2079 132 0 0 chr20 14971817 14972106 -57181776 + AluSx SINE Alu 1 289 -23 424 269 98 93 chr20 14972143 14972541 -57181341 - MLT1J LTR MaLR -2 509 110 569 279 146 0 chr20 14972696 14972861 -57181021 + MER5A DNA MER1_type 1 189 0 4735 222 46 97 chr20 14972871 14974721 -57179161 + MER52A LTR ERV1 1 1755 0 370 212 227 23 chr20 14974872 14975004 -57178878 - MER5A DNA MER1_type -5 184 26 917 199 0 23 chr20 14975018 14975194 -57178688 + MER5A DNA MER1_type 15 186 -3 1681 189 81 35 chr20 14975281 14975652 -57178230 - MLT1B LTR MaLR 0 390 3 441 210 8 0 chr20 14975654 14975749 -57178133 - MER5A DNA MER1_type -93 96 1 226 382 0 32 chr20 14975989 14976112 -57177770 + L3 LINE CR1 729 847 -730 701 253 18 29 chr20 14976438 14976503 -57177379 + MER5B DNA MER1_type 10 74 -104 1544 200 72 88 chr20 14976503 14976932 -57176950 - MLT1C LTR MaLR 0 467 45 1336 186 115 11 chr20 14976932 14977211 -57176671 - AluSg SINE Alu -2 308 1 1544 200 72 88 chr20 14977211 14977256 -57176626 - MLT1C LTR MaLR -422 45 1 701 253 18 29 chr20 14977256 14977360 -57176522 + MER5B DNA MER1_type 74 177 -1 654 204 70 35 chr20 14977521 14977693 -57176189 - MER5B DNA MER1_type 0 178 1 566 312 75 35 chr20 14977866 14978264 -57175618 + L2 LINE L2 1686 2099 -1215 340 175 38 38 chr20 14978288 14978368 -57175514 - MER116 DNA Mariner 0 80 1 274 362 57 7 chr20 14978708 14978849 -57175033 + L2 LINE L2 2213 2360 -954 324 253 19 13 chr20 14978881 14979082 -57174800 + MLT1F LTR MaLR 20 211 -319 316 230 36 86 chr20 14979143 14979230 -57174652 + MLT1G LTR MaLR 457 536 -54 1889 199 64 89 chr20 14979230 14979794 -57174088 - MLT2B3 LTR ERVL -1 553 4 316 230 36 86 chr20 14979794 14979845 -57174037 + MLT1G LTR MaLR 536 588 -2 515 259 76 16 chr20 14980097 14980282 -57173600 - MER117 DNA MER1_type 0 197 2 1326 234 108 18 chr20 14980489 14980877 -57173005 + MLT1H LTR MaLR 6 428 -121 216 0 0 0 chr20 14981626 14981650 -57172232 + (T)n Simple_repeat Simple_repeat 1 24 0 455 253 143 55 chr20 14981915 14982351 -57171531 + MLT1H LTR MaLR 72 592 -3 24 0 0 0 chr20 14983252 14983276 -57170606 + AT_rich Low_complexity Low_complexity 1 24 0 662 239 165 71 chr20 14985006 14985091 -57168791 - L2 LINE L2 -1 3312 3236 2298 88 7 0 chr20 14985091 14985385 -57168497 + AluSq SINE Alu 1 296 -17 662 239 165 71 chr20 14985385 14985663 -57168219 - L2 LINE L2 -77 3236 2915 1579 222 162 40 chr20 14985668 14986194 -57167688 + MLT1G1 LTR MaLR 6 595 0 346 256 181 15 chr20 14986194 14986327 -57167555 - L2 LINE L2 -417 2897 2743 331 310 121 0 chr20 14987609 14987725 -57166157 - MIR3 SINE MIR -9 199 70 195 292 83 0 chr20 14987890 14987962 -57165920 + L2 LINE L2 3168 3245 -27 325 242 132 0 chr20 14988072 14988163 -57165719 - L2 LINE L2 -21 3292 3190 1813 279 48 35 chr20 14989621 14990240 -57163642 - MLT2E LTR ERVL 0 628 2 935 233 201 72 chr20 14990544 14990655 -57163227 + L1MB8 LINE L1 5616 5711 -467 9480 166 7 2 chr20 14990655 14993016 -57160866 - L1PA14 LINE L1 -17 6144 3767 935 233 201 72 chr20 14993016 14993401 -57160481 + L1MB8 LINE L1 5711 6176 -2 865 321 33 40 chr20 14993518 14993939 -57159943 - MLT1J2 LTR MaLR -3 447 30 772 318 111 21 chr20 14994971 14995462 -57158420 + L2 LINE L2 2730 3266 -47 2060 183 17 13 chr20 14995477 14995935 -57157947 - MER89 LTR ERV1 0 559 1 195 129 0 0 chr20 14996748 14996779 -57157103 + (A)n Simple_repeat Simple_repeat 1 31 0 688 243 28 11 chr20 14997726 14997903 -57155979 + MER5A DNA MER1_type 10 189 0 577 332 97 31 chr20 14998121 14998727 -57155155 + L2 LINE L2 1807 2452 -862 257 309 202 18 chr20 14999022 14999245 -57154637 + L2 LINE L2 2824 3087 -185 23 33 0 0 chr20 14999387 14999417 -57154465 + AT_rich Low_complexity Low_complexity 1 30 0 504 309 18 73 chr20 15000693 15000968 -57152914 + MIR SINE MIR 3 262 0 478 246 27 0 chr20 15001705 15001815 -57152067 - MER81 DNA DNA 0 114 2 2754 213 42 10 chr20 15004172 15004958 -57148924 - L1ME1 LINE L1 -7 6657 5820 1692 172 89 0 chr20 15004959 15005296 -57148586 + L1MB4 LINE L1 5584 5950 -230 315 111 222 0 chr20 15005296 15005359 -57148523 + AluS SINE Alu 2 78 -225 1150 204 19 45 chr20 15005359 15005387 -57148495 + L1MB4 LINE L1 5922 5949 -231 2403 102 0 0 chr20 15005387 15005700 -57148182 + AluSq SINE Alu 1 313 0 1150 204 19 45 chr20 15005700 15005935 -57147947 + L1MB4 LINE L1 5949 6178 -2 4518 221 68 48 chr20 15005959 15007512 -57146370 - L1ME1 LINE L1 -840 5804 4220 2880 234 43 19 chr20 15007541 15008427 -57145455 - L1ME1 LINE L1 -3072 3572 2666 483 63 0 0 chr20 15008479 15008542 -57145340 + (TA)n Simple_repeat Simple_repeat 2 64 0 267 172 25 123 chr20 15008552 15008674 -57145208 + MLT1C LTR MaLR 58 167 -300 1210 197 62 48 chr20 15008761 15009051 -57144831 + MLT1C LTR MaLR 172 465 -2 808 279 35 48 chr20 15009061 15009735 -57144147 - L1ME1 LINE L1 -4128 2697 1899 194 0 39 0 chr20 15009746 15009772 -57144110 + (TTA)n Simple_repeat Simple_repeat 1 27 0 5811 185 32 35 chr20 15009815 15012122 -57141760 - L1PA16 LINE L1 -9 6157 3864 2982 260 8 5 chr20 15012117 15012974 -57140908 + L1PA16 LINE L1 3008 3867 -2279 * 1070 198 30 67 chr20 15012963 15013068 -57140814 - L1ME1 LINE L1 -4752 1894 1787 * 2110 111 3 32 chr20 15013068 15013384 -57140498 - AluSx SINE Alu -5 307 1 1070 198 30 67 chr20 15013384 15013607 -57140275 - L1ME1 LINE L1 -4859 1787 1578 * 3179 251 18 10 chr20 15013599 15014527 -57139355 - L1M4 LINE L1 -2258 3888 2953 675 282 9 5 chr20 15014569 15014789 -57139093 - L1ME1 LINE L1 -4973 1569 1349 6450 45 5 0 chr20 15014797 15015582 -57138300 - L1PA5 LINE L1 0 6154 5366 5141 226 53 20 chr20 15015583 15015781 -57138101 - L1ME1 LINE L1 -5178 1364 1174 2384 65 0 29 chr20 15015781 15016087 -57137795 + AluY SINE Alu 1 297 -14 5141 226 53 20 chr20 15016087 15016459 -57137423 - L1ME1 LINE L1 -5368 1174 816 405 0 0 0 chr20 15016459 15016504 -57137378 + (TG)n Simple_repeat Simple_repeat 2 46 0 5141 226 53 20 chr20 15016504 15017248 -57136634 - L1ME1 LINE L1 -5726 816 5 274 296 0 14 chr20 15018825 15018896 -57134986 - L2 LINE L2 0 3313 3244 843 221 10 25 chr20 15019052 15019251 -57134631 - MER3 DNA MER1_type -2 207 12 32 43 0 0 chr20 15020097 15020143 -57133739 + AT_rich Low_complexity Low_complexity 1 46 0 988 287 80 12 chr20 15020205 15020630 -57133252 - LTR16A1 LTR ERVL -3 454 1 646 270 47 43 chr20 15020923 15021134 -57132748 + MIR SINE MIR 15 226 -36 644 299 86 21 chr20 15021219 15021453 -57132429 + MIR SINE MIR 1 249 -13 1414 245 133 16 chr20 15021725 15022170 -57131712 - MLT1H LTR MaLR -7 542 46 1523 251 95 13 chr20 15023041 15023495 -57130387 - LTR16C LTR ERVL 0 491 1 2167 115 6 3 chr20 15023873 15024185 -57129697 + AluSp SINE Alu 1 313 0 1094 285 98 5 chr20 15024781 15025199 -57128683 + LTR16A1 LTR ERVL 1 457 0 181 358 11 0 chr20 15025235 15025330 -57128552 + MIR SINE MIR 47 142 -66 513 216 61 7 chr20 15025356 15025504 -57128378 + LTR16A1 LTR ERVL 302 457 0 1018 281 114 17 chr20 15025975 15026380 -57127502 + LTR16A1 LTR ERVL 4 447 -10 366 235 0 0 chr20 15027370 15027451 -57126431 + MER96B DNA MER1_type? 30 110 -307 4371 196 58 35 chr20 15027452 15029393 -57124489 - L1MB1 LINE L1 -5 5987 3999 2258 237 32 29 chr20 15029390 15030079 -57123803 - L1MB1 LINE L1 -2191 3779 3089 * 354 295 36 5 chr20 15030094 15030287 -57123595 - L1MB1 LINE L1 -4211 1761 1563 2967 224 22 66 chr20 15030296 15031476 -57122406 - L1MB1 LINE L1 -4535 1437 409 377 308 60 71 chr20 15031574 15031938 -57121944 - L1MB1 LINE L1 -5527 364 5 321 169 48 12 chr20 15031947 15032030 -57121852 + MER96B DNA MER1_type? 96 181 -236 353 272 60 92 chr20 15033275 15033525 -57120357 - L2 LINE L2 0 3313 3072 334 195 0 103 chr20 15033597 15033684 -57120198 - MER58 DNA MER1_type -1 2419 2342 244 307 0 69 chr20 15033758 15033859 -57120023 - MER58 DNA MER1_type -247 94 1 474 312 192 16 chr20 15034544 15034977 -57118905 + L2 LINE L2 2804 3312 -1 2331 193 61 11 chr20 15036335 15036812 -57117070 + L1MCa LINE L1 26 526 -5900 498 204 11 0 chr20 15037124 15037212 -57116670 + MER3 DNA MER1_type 47 135 -74 22 35 0 0 chr20 15037479 15037508 -57116374 + AT_rich Low_complexity Low_complexity 1 29 0 492 359 66 13 chr20 15037638 15037942 -57115940 - LTR16C LTR ERVL -99 392 73 707 132 24 113 chr20 15038776 15038988 -57114894 + Charlie5 DNA MER1_type 2393 2585 -27 485 291 77 48 chr20 15038986 15039361 -57114521 + MLT1L LTR MaLR 146 531 -84 * 271 302 10 10 chr20 15039691 15039787 -57114095 - MER33 DNA MER1_type -228 96 1 1248 266 46 44 chr20 15039891 15040346 -57113536 + LTR16A1 LTR ERVL 2 457 0 183 261 62 31 chr20 15041374 15041439 -57112443 - L2 LINE L2 -1 3312 3246 346 253 53 0 chr20 15042376 15042451 -57111431 - L2 LINE L2 0 3272 3194 206 156 0 0 chr20 15042622 15042654 -57111228 - MIR SINE MIR -144 118 87 806 216 34 29 chr20 15043036 15043240 -57110642 - LTR16A1 LTR ERVL -13 444 240 698 306 79 45 chr20 15044069 15044448 -57109434 + MLT1J2 LTR MaLR 59 450 0 642 317 111 37 chr20 15044880 15045287 -57108595 - MLT1H LTR MaLR -3 546 110 807 239 83 23 chr20 15045387 15045605 -57108277 + MIR SINE MIR 30 260 -2 1418 171 74 93 chr20 15045821 15046348 -57107534 - MER67C LTR ERV1 -32 482 1 802 297 56 13 chr20 15047754 15048060 -57105822 - LTR16C LTR ERVL -1 490 172 211 315 62 56 chr20 15048594 15048772 -57105110 + MIR SINE MIR 32 210 -52 180 0 0 0 chr20 15049729 15049749 -57104133 + (A)n Simple_repeat Simple_repeat 1 20 0 1131 221 22 67 chr20 15049752 15049814 -57104068 + L1ME3 LINE L1 5816 5879 -283 1896 123 68 41 chr20 15049814 15050179 -57103703 + THE1C LTR MaLR 1 375 0 1131 221 22 67 chr20 15050179 15050474 -57103408 + L1ME3 LINE L1 5879 6157 -5 201 121 0 0 chr20 15050477 15050510 -57103372 + (CA)n Simple_repeat Simple_repeat 2 34 0 324 159 0 32 chr20 15050563 15050626 -57103256 - MER5A DNA MER1_type -1 188 128 1921 152 26 3 chr20 15050630 15050932 -57102950 + AluSx SINE Alu 3 311 -1 202 152 0 177 chr20 15050981 15051060 -57102822 + MER5B DNA MER1_type 97 161 -17 240 300 134 23 chr20 15051133 15051307 -57102575 - MIR SINE MIR -55 207 5 558 280 33 67 chr20 15051390 15051690 -57102192 - MER5C DNA MER1_type -8 316 27 270 170 57 0 chr20 15051708 15051761 -57102121 + MER5C DNA MER1_type 17 72 -252 309 322 137 26 chr20 15051824 15052094 -57101788 - L3 LINE CR1 -218 1359 1060 218 396 22 0 chr20 15052119 15052210 -57101672 + L2 LINE L2 33 125 -3189 220 362 8 24 chr20 15052232 15052359 -57101523 - L2 LINE L2 -2666 648 524 3475 294 217 15 chr20 15052380 15054855 -57099027 + L2 LINE L2 328 3313 0 766 329 59 33 chr20 15054864 15055201 -57098681 - L3 LINE CR1 -526 1051 706 922 238 136 81 chr20 15055292 15055871 -57098011 + MLT1G LTR MaLR 1 584 -6 416 241 153 7 chr20 15057793 15057930 -57095952 - MLT1H LTR MaLR -38 511 355 267 230 54 40 chr20 15058044 15058118 -57095764 - MLT1H LTR MaLR -368 181 107 442 197 13 0 chr20 15058237 15058274 -57095608 + MER3 DNA MER1_type 10 47 -162 504 203 49 16 chr20 15058274 15058397 -57095485 - MER3 DNA MER1_type 0 209 83 1948 183 89 27 chr20 15058781 15059236 -57094646 - L1MA9 LINE L1 -1 6311 5821 495 188 86 55 chr20 15059236 15059364 -57094518 - FLAM_A SINE Alu -1 132 1 1948 183 89 27 chr20 15059364 15059384 -57094498 - L1MA9 LINE L1 -491 5821 5804 21 0 0 0 chr20 15059616 15059637 -57094245 + AT_rich Low_complexity Low_complexity 1 21 0 202 279 0 15 chr20 15060015 15060083 -57093799 + T-rich Low_complexity Low_complexity 2 68 0 245 345 57 48 chr20 15060803 15061012 -57092870 - L2 LINE L2 -144 3128 2918 28 29 0 0 chr20 15061078 15061113 -57092769 + AT_rich Low_complexity Low_complexity 1 35 0 2038 102 16 10 chr20 15061707 15062010 -57091872 - L1PA13 LINE L1 -236 5927 5623 1649 85 0 0 chr20 15062012 15062236 -57091646 + L1PA13 LINE L1 5932 6155 -8 196 232 232 42 chr20 15062432 15062527 -57091355 + MIR3 SINE MIR 4 116 -92 500 229 183 0 chr20 15062593 15062746 -57091136 + MER5A DNA MER1_type 9 189 0 207 179 0 0 chr20 15063581 15063620 -57090262 + (GGCTG)n Simple_repeat Simple_repeat 2 40 0 235 315 34 34 chr20 15063650 15063796 -57090086 - MLT1H LTR MaLR -196 353 208 2497 81 3 0 chr20 15064051 15064385 -57089497 + L1PA7 LINE L1 5817 6151 -3 261 210 0 0 chr20 15065907 15065969 -57087913 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 323 226 0 24 chr20 15066232 15066316 -57087566 - MER33 DNA MER1_type 0 324 243 1532 185 15 85 chr20 15066320 15066731 -57087151 + MLT1B LTR MaLR 3 384 -6 614 166 171 68 chr20 15066762 15066967 -57086915 - MER33 DNA MER1_type -97 227 2 259 294 111 71 chr20 15067856 15068459 -57085423 + L2 LINE L2 2147 2773 -541 515 204 68 37 chr20 15068522 15068684 -57085198 + MER5A DNA MER1_type 1 167 -22 1232 114 21 114 chr20 15068685 15068964 -57084918 + AluSq SINE Alu 69 325 0 1961 218 78 30 chr20 15068988 15069594 -57084288 - MER92B LTR ERV1 0 636 2 220 352 28 0 chr20 15069743 15069851 -57084031 + L2 LINE L2 3161 3271 -1 1307 211 75 67 chr20 15071250 15071638 -57082244 - LTR16C LTR ERVL 0 491 101 225 296 0 0 chr20 15071782 15071836 -57082046 + MER5B DNA MER1_type 1 54 -124 4254 164 63 29 chr20 15071847 15072805 -57081077 + L1MC2 LINE L1 5340 6329 -15 327 319 0 11 chr20 15072827 15072921 -57080961 + MER5B DNA MER1_type 86 178 0 268 287 63 56 chr20 15073197 15073340 -57080542 - MER5A DNA MER1_type -25 164 21 547 198 5 165 chr20 15073375 15073587 -57080295 - MER5B DNA MER1_type 0 178 1 7494 154 5 10 chr20 15073991 15076117 -57077765 - L1PA13 LINE L1 0 6163 4031 713 200 19 19 chr20 15076613 15076773 -57077109 - MLT1E1 LTR MaLR 0 654 495 327 143 52 13 chr20 15076773 15076850 -57077032 + L1MC2 LINE L1 6155 6234 -110 783 270 119 42 chr20 15077067 15077522 -57076360 - MLT1E1 LTR MaLR -164 490 1 324 176 47 12 chr20 15077907 15077992 -57075890 + LTR37B LTR ERV1 198 285 -183 525 250 19 6 chr20 15078070 15078230 -57075652 + MLT1E3 LTR MaLR 385 546 -78 429 203 41 0 chr20 15078301 15078424 -57075458 + LTR37A LTR ERV1 299 426 0 229 296 19 9 chr20 15078925 15079033 -57074849 + (TA)n Simple_repeat Simple_repeat 2 110 0 1003 243 70 77 chr20 15079238 15079694 -57074188 + LTR16A1 LTR ERVL 4 456 -1 443 308 30 12 chr20 15080403 15080572 -57073310 - MLT1K LTR MaLR -263 325 154 512 273 82 27 chr20 15081433 15081653 -57072229 - MLT1H1 LTR MaLR -2 553 322 2563 162 7 21 chr20 15081900 15082333 -57071549 - MSTC LTR MaLR 0 428 2 547 324 60 43 chr20 15082940 15083190 -57070692 - MIR SINE MIR -1 261 12 574 229 72 24 chr20 15083329 15083495 -57070387 - MER5B DNA MER1_type -4 174 1 2089 86 11 0 chr20 15083592 15083908 -57069974 - AluY SINE Alu 0 319 1 207 359 64 0 chr20 15083910 15083988 -57069894 + L2 LINE L2 2936 3018 -254 1620 201 10 16 chr20 15084634 15084943 -57068939 + AluJo SINE Alu 1 307 -5 541 302 31 59 chr20 15085161 15085416 -57068466 - MIR SINE MIR -4 258 11 375 235 34 27 chr20 15085585 15085734 -57068148 + L1ME4a LINE L1 5945 6094 -27 21 36 0 0 chr20 15086173 15086201 -57067681 + AT_rich Low_complexity Low_complexity 1 28 0 1574 163 10 39 chr20 15086211 15086518 -57067364 + AluJo SINE Alu 11 308 -4 194 317 0 17 chr20 15086983 15087043 -57066839 + MIR SINE MIR 3 61 -201 372 43 0 0 chr20 15087052 15087098 -57066784 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1430 203 3 41 chr20 15087103 15087398 -57066484 - AluJo SINE Alu -28 284 1 1804 188 0 25 chr20 15087665 15087985 -57065897 + AluJb SINE Alu 1 312 0 2136 126 0 3 chr20 15088836 15089129 -57064753 + AluSx SINE Alu 1 292 -20 274 374 28 0 chr20 15089642 15089749 -57064133 + MIR SINE MIR 9 118 -144 409 228 19 37 chr20 15090148 15090363 -57063519 + GA-rich Low_complexity Low_complexity 1 211 0 190 261 273 0 chr20 15090423 15090511 -57063371 + L3 LINE CR1 1446 1557 -20 21 0 0 0 chr20 15091449 15091470 -57062412 + AT_rich Low_complexity Low_complexity 1 21 0 273 369 85 7 chr20 15091853 15091994 -57061888 - MIR3 SINE MIR -45 163 12 230 300 71 0 chr20 15092207 15092277 -57061605 + L2 LINE L2 3239 3313 0 458 265 0 120 chr20 15092658 15092892 -57060990 + LTR16C LTR ERVL 286 491 0 180 0 0 0 chr20 15093035 15093055 -57060827 + (T)n Simple_repeat Simple_repeat 1 20 0 967 227 61 52 chr20 15093227 15093570 -57060312 + LTR16A1 LTR ERVL 112 457 0 285 279 178 31 chr20 15094124 15094253 -57059629 - MER5A DNA MER1_type 0 189 42 1655 141 97 64 chr20 15094372 15094776 -57059106 - MSTB1 LTR MaLR -12 420 4 6335 94 31 0 chr20 15095227 15096257 -57057625 - L1PA11 LINE L1 0 6174 5136 1106 251 84 12 chr20 15096257 15096581 -57057301 + L1PA12 LINE L1 661 1011 -6570 * 4640 108 10 1 chr20 15096574 15097262 -57056620 - THE1A-int LTR MaLR -886 694 1 2661 90 3 3 chr20 15097262 15097617 -57056265 - THE1A LTR MaLR 0 355 1 682 306 20 0 chr20 15097654 15098053 -57055829 + L1M4 LINE L1 3079 3485 -2661 71 95 0 0 chr20 15098053 15098264 -57055618 + AT_rich Low_complexity Low_complexity 1 211 0 2219 212 17 71 chr20 15098268 15099027 -57054855 + L1M4 LINE L1 3522 4239 -1907 14426 185 29 21 chr20 15099037 15102507 -57051375 + L1MA3 LINE L1 16 3457 -4267 279 0 0 0 chr20 15102507 15102538 -57051344 + (TG)n Simple_repeat Simple_repeat 2 32 0 14426 185 29 21 chr20 15102538 15105252 -57048630 + L1MA3 LINE L1 3457 6148 -1576 257 0 30 0 chr20 15105252 15105285 -57048597 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 14426 185 29 21 chr20 15105285 15105978 -57047904 + L1MA3 LINE L1 6148 6834 -890 2063 126 7 0 chr20 15105978 15106272 -57047610 + AluSx SINE Alu 1 296 -16 14426 185 29 21 chr20 15106272 15106730 -57047152 + L1MA3 LINE L1 6834 7704 -20 28 0 0 0 chr20 15106770 15106798 -57047084 + AT_rich Low_complexity Low_complexity 1 28 0 202 216 20 20 chr20 15107255 15107306 -57046576 - L2 LINE L2 -6 3266 3216 342 345 18 0 chr20 15107339 15107449 -57046433 + L2 LINE L2 3202 3313 0 761 203 39 0 chr20 15107615 15107797 -57046085 + MER53 DNA DNA 1 189 0 201 195 0 0 chr20 15107858 15107899 -57045983 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 2117 194 75 8 chr20 15108333 15108803 -57045079 - MLT1D LTR MaLR 0 505 5 24 0 0 0 chr20 15108910 15108934 -57044948 + AT_rich Low_complexity Low_complexity 1 24 0 537 281 47 12 chr20 15109021 15109192 -57044690 + MER5B DNA MER1_type 1 177 -1 291 271 0 17 chr20 15109310 15109428 -57044454 + (TTATA)n Simple_repeat Simple_repeat 4 119 0 271 327 29 0 chr20 15109547 15109651 -57044231 + MIR3 SINE MIR 96 202 -6 1016 298 83 14 chr20 15109733 15110152 -57043730 - LTR16C LTR ERVL 0 491 44 697 211 8 0 chr20 15110847 15110970 -57042912 - FLAM_A SINE Alu -9 124 1 2610 180 10 68 chr20 15111177 15111765 -57042117 + MER41C LTR ERV1 1 554 0 1238 147 30 35 chr20 15111872 15112103 -57041779 + MER30 DNA MER1_type 1 230 0 540 266 12 18 chr20 15112164 15112333 -57041549 + MLT1H LTR MaLR 382 549 0 674 275 87 0 chr20 15114040 15114269 -57039613 + LTR16A1 LTR ERVL 179 427 -30 250 235 62 74 chr20 15114325 15114406 -57039476 - MIR SINE MIR -148 114 35 453 236 18 0 chr20 15115817 15115927 -57037955 + MLT1H LTR MaLR 225 336 -213 1655 192 20 6 chr20 15115930 15116273 -57037609 + MLT1A1 LTR MaLR 1 348 -17 237 335 155 25 chr20 15116486 15116647 -57037235 - MIR SINE MIR -77 185 4 268 23 0 23 chr20 15117014 15117057 -57036825 - AluY SINE Alu -2 298 257 1203 62 0 7 chr20 15117057 15117202 -57036680 - AluY SINE Alu -125 186 43 3035 118 6 2 chr20 15119260 15119734 -57034148 - L1MA4A LINE L1 -7 6296 5821 13261 195 32 26 chr20 15119740 15123510 -57030372 - L1 LINE L1 -3051 3797 5 24 0 0 0 chr20 15124304 15124328 -57029554 + AT_rich Low_complexity Low_complexity 1 24 0 1481 92 0 0 chr20 15125542 15125761 -57028121 + AluY SINE Alu 98 316 0 2574 116 11 0 chr20 15126165 15126536 -57027346 - THE1C LTR MaLR 0 375 1 9107 111 77 8 chr20 15126536 15127996 -57025886 - THE1C-int LTR MaLR 0 1580 20 2212 127 75 0 chr20 15127996 15128343 -57025539 - THE1C LTR MaLR -2 373 1 272 300 30 0 chr20 15128499 15128599 -57025283 - MLT1I LTR MaLR -2 407 305 968 259 12 8 chr20 15130956 15131215 -57022667 + MIR SINE MIR 3 262 0 2876 223 47 1 chr20 15131341 15131395 -57022487 - L1 LINE L1 -1834 4312 4262 510 17 0 0 chr20 15131395 15131454 -57022428 + (TG)n Simple_repeat Simple_repeat 1 59 0 2876 223 47 1 chr20 15131454 15132167 -57021715 - L1 LINE L1 -1884 4262 3510 1178 257 143 80 chr20 15132199 15132384 -57021498 - L1MC4 LINE L1 -26 8016 7844 2369 85 0 0 chr20 15132384 15132678 -57021204 - AluY SINE Alu -17 294 1 1178 257 143 80 chr20 15132678 15133508 -57020374 - L1MC4 LINE L1 -198 7844 6937 957 76 0 8 chr20 15134021 15134153 -57019729 + AluSg/x SINE Alu 182 312 0 1179 248 59 30 chr20 15134399 15134838 -57019044 + LTR16A1 LTR ERVL 1 452 -5 486 333 86 35 chr20 15136389 15136842 -57017040 - MLT1K LTR MaLR 0 476 1 218 321 110 43 chr20 15137470 15137679 -57016203 - MIR SINE MIR -20 242 20 2251 85 10 17 chr20 15138105 15138400 -57015482 - AluSg SINE Alu -17 293 1 2235 221 53 8 chr20 15139224 15139811 -57014071 - L1MD2 LINE L1 0 6428 5816 507 271 161 0 chr20 15140102 15140257 -57013625 - MER5A DNA MER1_type -2 187 8 188 320 0 64 chr20 15140780 15140858 -57013024 + L3 LINE CR1 1267 1339 -238 1219 244 66 12 chr20 15141004 15141036 -57012846 - MER58B DNA MER1_type -2083 337 308 234 0 0 0 chr20 15141036 15141062 -57012820 + (TAAG)n Simple_repeat Simple_repeat 3 28 0 1219 244 66 12 chr20 15141062 15141349 -57012533 - MER58B DNA MER1_type -2112 308 1 206 388 23 0 chr20 15141999 15142128 -57011754 - MIR SINE MIR -79 183 52 23 68 0 0 chr20 15142630 15142674 -57011208 + AT_rich Low_complexity Low_complexity 1 44 0 1039 197 119 63 chr20 15142696 15143031 -57010851 + MLT1A1 LTR MaLR 4 357 -8 26 0 0 0 chr20 15143092 15143118 -57010764 + AT_rich Low_complexity Low_complexity 1 26 0 3564 191 21 15 chr20 15143205 15144011 -57009871 + L1MD1 LINE L1 5427 6237 -5 379 321 5 5 chr20 15144162 15144349 -57009533 + L1ME LINE L1 5623 5809 -312 374 212 178 17 chr20 15144505 15144623 -57009259 + MIR SINE MIR 76 212 -50 840 240 22 0 chr20 15146501 15146680 -57007202 - MER5A DNA MER1_type -5 184 2 252 268 24 0 chr20 15146859 15146941 -57006941 - L1MD2 LINE L1 -353 5837 5754 448 308 96 42 chr20 15146942 15147296 -57006586 - L1MD2 LINE L1 -507 5726 5354 2561 60 0 0 chr20 15147389 15147691 -57006191 - AluY SINE Alu -9 302 1 2411 245 62 15 chr20 15147706 15148513 -57005369 + L1ME3 LINE L1 5315 6159 -3 192 238 0 0 chr20 15149046 15149109 -57004773 + (TA)n Simple_repeat Simple_repeat 2 64 0 2588 52 3 0 chr20 15149373 15149678 -57004204 + AluY SINE Alu 1 306 -5 180 0 0 0 chr20 15151777 15151797 -57002085 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2287 102 0 3 chr20 15151800 15152095 -57001787 - AluSx SINE Alu -18 294 1 659 177 64 0 chr20 15152111 15152252 -57001630 - L1MA10 LINE L1 -3 6331 6182 282 213 0 0 chr20 15152285 15152346 -57001536 - L1MD2 LINE L1 -1830 4385 4325 1212 208 16 73 chr20 15152370 15152754 -57001128 - L1MD2 LINE L1 -2022 4193 3832 941 240 56 30 chr20 15152767 15153230 -57000652 - L1MD2 LINE L1 -4895 1501 1027 * 1197 289 34 22 chr20 15153227 15153643 -57000239 - L1MD2 LINE L1 -5940 456 36 27 49 0 0 chr20 15153792 15153833 -57000049 + AT_rich Low_complexity Low_complexity 1 41 0 979 265 191 5 chr20 15153872 15154317 -56999565 + MLT1H LTR MaLR 3 530 -19 837 185 0 0 chr20 15155425 15155560 -56998322 + AluJo SINE Alu 1 135 -177 1413 179 29 71 chr20 15155560 15155868 -56998014 + AluJo SINE Alu 1 295 -17 922 239 14 5 chr20 15156124 15156346 -56997536 + MER58A DNA MER1_type 1 224 0 976 226 108 79 chr20 15157619 15158089 -56995793 - MLT1D LTR MaLR -3 502 19 258 339 70 11 chr20 15159745 15159931 -56993951 - MIR SINE MIR -13 249 53 24 32 0 0 chr20 15160378 15160409 -56993473 + AT_rich Low_complexity Low_complexity 1 31 0 282 219 0 0 chr20 15160409 15160482 -56993400 - L1ME3A LINE L1 -14 6436 6364 1657 258 76 13 chr20 15160565 15160792 -56993090 - L1ME3A LINE L1 -230 6220 6009 1618 141 52 0 chr20 15160792 15161040 -56992842 - AluJb SINE Alu -49 263 3 1657 258 76 13 chr20 15161040 15161598 -56992284 - L1ME3A LINE L1 -441 6009 5383 563 288 111 48 chr20 15161611 15162136 -56991746 - L1ME3A LINE L1 -1088 5338 4781 2491 131 2 60 chr20 15162265 15162717 -56991165 - LTR9 LTR ERV1 -186 426 1 416 283 60 20 chr20 15162950 15163141 -56990741 - L1ME3A LINE L1 -1782 4644 4439 2112 120 13 26 chr20 15163141 15163450 -56990432 - AluSg SINE Alu -5 305 1 416 283 60 20 chr20 15163450 15163509 -56990373 - L1ME3A LINE L1 -1987 4439 4384 476 238 20 0 chr20 15163637 15163738 -56990144 - AluJo SINE Alu -25 287 185 2625 95 51 14 chr20 15163738 15164170 -56989712 - LTR7 LTR ERV1 -2 448 1 2362 88 39 16 chr20 15164170 15164554 -56989328 - HERVH LTR ERV1 0 7713 7321 1304 128 18 9 chr20 15164551 15164769 -56989113 - HERVH LTR ERV1 -1894 5819 5600 * 4167 137 0 1 chr20 15164770 15165433 -56988449 - HERVH LTR ERV1 -2564 5149 4488 3136 115 6 6 chr20 15165433 15165937 -56987945 - HERVH LTR ERV1 -3718 3995 3492 939 120 7 0 chr20 15165927 15166077 -56987805 - HERVH LTR ERV1 -4423 3290 3140 * 16299 89 20 11 chr20 15166056 15168975 -56984907 - HERVH LTR ERV1 -4718 2995 1 2603 97 51 14 chr20 15168977 15169409 -56984473 - LTR7 LTR ERV1 -2 448 1 1179 168 0 5 chr20 15169409 15169600 -56984282 - AluJo SINE Alu -121 191 2 1464 261 91 63 chr20 15169606 15171070 -56982812 - L1ME3A LINE L1 -2188 4238 2735 305 247 133 40 chr20 15171345 15171495 -56982387 - L1ME3A LINE L1 -3698 2728 2565 2759 169 7 31 chr20 15171727 15172279 -56981603 + MER34B LTR ERV1 1 539 -26 351 271 81 51 chr20 15172600 15172836 -56981046 + MER102a DNA MER1_type 88 330 0 351 280 60 0 chr20 15174868 15174968 -56978914 + MLT1H LTR MaLR 249 354 -195 228 293 70 15 chr20 15175602 15175875 -56978007 + L1ME LINE L1 2187 2474 -3672 341 245 64 27 chr20 15175932 15176120 -56977762 + L1ME LINE L1 5051 5245 -901 239 252 39 52 chr20 15176143 15176298 -56977584 + L1ME LINE L1 5767 5919 -247 501 348 40 18 chr20 15178156 15178484 -56975398 - LTR16B LTR ERVL -67 397 63 422 296 69 60 chr20 15178592 15178909 -56974973 - MLT1I LTR MaLR -25 384 65 285 29 0 0 chr20 15179068 15179102 -56974780 + (CA)n Simple_repeat Simple_repeat 2 35 0 28 0 0 0 chr20 15179562 15179590 -56974292 + AT_rich Low_complexity Low_complexity 1 28 0 428 273 29 29 chr20 15180309 15180481 -56973401 - L1ME3A LINE L1 -5182 1244 1073 3754 224 20 13 chr20 15180494 15181739 -56972143 + L1PA15-16 LINE L1 11 1569 -5280 765 234 21 0 chr20 15181719 15181907 -56971975 + L1PA15-16 LINE L1 1336 1527 -5323 * 4356 251 27 46 chr20 15182305 15183034 -56970848 + L1PA15-16 LINE L1 1419 2160 -4689 23468 31 1 0 chr20 15183034 15186643 -56967239 - L1PA3 LINE L1 0 6155 2544 4356 251 27 46 chr20 15186643 15186964 -56966918 + L1PA15-16 LINE L1 2160 2486 -4363 2304 105 3 3 chr20 15186964 15187270 -56966612 - AluSp SINE Alu -7 306 1 4356 251 27 46 chr20 15187270 15187602 -56966280 + L1PA15-16 LINE L1 2486 2853 -3996 6249 198 13 44 chr20 15187604 15189545 -56964337 + L1M1 LINE L1 3618 5489 -689 812 229 45 76 chr20 15189515 15190074 -56963808 - L1MC/D LINE L1 -625 5617 5077 * 285 235 0 24 chr20 15190158 15190243 -56963639 + (TA)n Simple_repeat Simple_repeat 1 83 0 2262 101 0 0 chr20 15190385 15190673 -56963209 - AluSg SINE Alu -22 288 1 21 0 0 0 chr20 15190836 15190857 -56963025 + AT_rich Low_complexity Low_complexity 1 21 0 719 285 111 89 chr20 15190956 15191946 -56961936 + L1M4 LINE L1 3733 4744 -1402 2263 229 38 10 chr20 15191986 15192840 -56961042 + L1MB5 LINE L1 2429 3393 -2753 7647 22 2 0 chr20 15192863 15194040 -56959842 + L1PA3 LINE L1 4975 6153 -2 2585 216 34 26 chr20 15194070 15194944 -56958938 + L1MB5 LINE L1 5127 6010 -164 462 233 10 0 chr20 15195384 15195487 -56958395 + LTR16A1 LTR ERVL 336 439 -18 606 314 25 63 chr20 15196936 15197299 -56956583 + L2 LINE L2 2896 3244 -69 720 307 61 16 chr20 15197367 15197742 -56956140 + LTR16A LTR ERVL 57 448 -2 941 267 105 45 chr20 15197911 15198507 -56955375 - L2 LINE L2 -5 3308 2678 507 270 169 0 chr20 15198669 15198847 -56955035 - MIR SINE MIR -6 256 49 301 58 39 0 chr20 15198864 15198916 -56954966 + (TA)n Simple_repeat Simple_repeat 2 55 0 2067 117 0 0 chr20 15198916 15199198 -56954684 - AluSx SINE Alu -26 286 5 277 227 76 0 chr20 15199344 15199410 -56954472 - MIR SINE MIR -80 182 112 341 284 0 0 chr20 15199415 15199496 -56954386 + MER5A DNA MER1_type 6 86 -103 241 229 110 37 chr20 15199606 15199715 -56954167 - MLT1I LTR MaLR -272 137 21 1217 233 86 24 chr20 15200125 15200580 -56953302 - L1ME3A LINE L1 -106 6064 5582 703 239 46 9 chr20 15201768 15201986 -56951896 - LTR33 LTR ERVL -7 514 289 390 194 59 49 chr20 15203151 15203324 -56950558 - MER34 LTR ERV1 0 542 450 216 0 0 0 chr20 15204632 15204656 -56949226 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 486 205 138 20 chr20 15205003 15205198 -56948684 - LTR48 LTR ERV1 -410 377 160 232 244 73 49 chr20 15205229 15205311 -56948571 - MER34 LTR ERV1 -458 84 1 2223 125 0 3 chr20 15205349 15205662 -56948220 + AluSx SINE Alu 1 312 0 1741 166 61 0 chr20 15205722 15206000 -56947882 + AluSq SINE Alu 1 295 -18 558 284 91 17 chr20 15206762 15206938 -56946944 - MER5A DNA MER1_type 0 189 1 277 194 45 15 chr20 15206960 15207027 -56946855 + MER5A DNA MER1_type 115 183 -6 630 237 23 23 chr20 15207041 15207218 -56946664 - MER5B DNA MER1_type 0 178 2 413 294 111 13 chr20 15208033 15208186 -56945696 + MIR3 SINE MIR 23 190 -18 2379 68 0 0 chr20 15208233 15208525 -56945357 - AluY SINE Alu -19 292 1 417 283 184 7 chr20 15209435 15209587 -56944295 - MER5A DNA MER1_type -2 187 9 248 274 108 10 chr20 15210884 15210986 -56942896 + MIR3 SINE MIR 87 198 -10 463 312 69 30 chr20 15211395 15211597 -56942285 - MER63A DNA MER1_type 0 210 1 40 0 0 0 chr20 15211759 15211799 -56942083 + AT_rich Low_complexity Low_complexity 1 40 0 266 125 54 18 chr20 15211994 15212050 -56941832 - L1ME LINE L1 -377 5744 5687 1249 196 57 99 chr20 15213083 15213506 -56940376 - MER21B LTR ERV1 -51 812 416 524 271 43 0 chr20 15213559 15213699 -56940183 - MER21B LTR ERV1 -615 248 103 424 237 21 11 chr20 15213745 15213838 -56940044 - MER21B LTR ERV1 -769 94 1 419 287 49 0 chr20 15213998 15214120 -56939762 - LTR16C LTR ERVL -5 486 359 785 217 32 18 chr20 15214151 15214368 -56939514 - MER96B DNA MER1_type? -1 416 197 225 149 21 21 chr20 15214637 15214684 -56939198 + MER96B DNA MER1_type? 193 239 -178 683 199 8 15 chr20 15214978 15215109 -56938773 + FLAM_C SINE Alu 2 131 -2 205 281 67 11 chr20 15215689 15215778 -56938104 - L2 LINE L2 -638 2676 2583 1978 219 24 13 chr20 15216032 15216494 -56937388 + MLT1C LTR MaLR 1 467 0 211 97 83 28 chr20 15217233 15217305 -56936577 + (TA)n Simple_repeat Simple_repeat 2 77 0 330 170 44 13 chr20 15217349 15217508 -56936374 + (TA)n Simple_repeat Simple_repeat 2 165 0 374 185 40 35 chr20 15217531 15217704 -56936178 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 * 400 151 90 12 chr20 15217590 15217756 -56936126 + (TA)n Simple_repeat Simple_repeat 2 180 0 700 206 49 80 chr20 15218138 15218597 -56935285 + MLT1F1 LTR MaLR 11 562 -5 655 262 45 49 chr20 15220161 15220405 -56933477 - MIR SINE MIR 0 262 20 256 349 33 7 chr20 15220438 15220590 -56933292 - LTR16C LTR ERVL -30 461 306 1373 239 16 16 chr20 15221251 15221814 -56932068 - LTR40a LTR ERVL -2 517 12 315 244 35 0 chr20 15222100 15222186 -56931696 + (TGGA)n Simple_repeat Simple_repeat 1 89 0 293 337 0 6 chr20 15222199 15222371 -56931511 + GA-rich Low_complexity Low_complexity 2 172 0 205 311 31 19 chr20 15222309 15222470 -56931412 + (TAGA)n Simple_repeat Simple_repeat 2 164 0 * 411 296 153 25 chr20 15222489 15222685 -56931197 + MIR SINE MIR 16 236 -26 1544 174 13 74 chr20 15223795 15224106 -56929776 - AluJo SINE Alu -20 292 1 220 313 0 15 chr20 15224293 15224360 -56929522 - L2 LINE L2 0 3313 3248 286 342 26 9 chr20 15224743 15224857 -56929025 - MIR SINE MIR -68 140 25 611 280 104 36 chr20 15224970 15225249 -56928633 - MLT1I LTR MaLR -13 396 99 208 225 0 0 chr20 15225340 15225380 -56928502 - L2 LINE L2 -2 3270 3231 438 274 21 42 chr20 15225610 15225800 -56928082 - MLT1H LTR MaLR -292 257 72 742 200 8 0 chr20 15225970 15226095 -56927787 + AluJo/FLAM SINE Alu 1 126 -176 2289 72 21 14 chr20 15226098 15226389 -56927493 - AluY SINE Alu -18 293 1 2870 293 110 45 chr20 15226406 15227058 -56926824 - L2 LINE L2 -189 3124 2515 1994 113 18 0 chr20 15227058 15227368 -56926514 + AluSc SINE Alu 1 315 0 2870 293 110 45 chr20 15227368 15228246 -56925636 - L2 LINE L2 -798 2515 1479 5093 141 35 8 chr20 15228246 15229121 -56924761 - MER4D LTR ERV1 -3 900 2 2870 293 110 45 chr20 15229121 15229220 -56924662 - L2 LINE L2 -1834 1479 1388 22 56 0 0 chr20 15230133 15230169 -56923713 + AT_rich Low_complexity Low_complexity 1 36 0 1416 265 103 11 chr20 15230533 15230997 -56922885 - MLT1H LTR MaLR -2 547 41 216 0 0 0 chr20 15231272 15231296 -56922586 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 672 233 186 12 chr20 15232307 15232560 -56921322 + LTR16A1 LTR ERVL 160 456 -1 397 215 88 26 chr20 15232606 15232759 -56921123 - MLT1J2 LTR MaLR -29 471 273 406 218 105 24 chr20 15232805 15232929 -56920953 - MLT1J2 LTR MaLR -276 174 41 900 167 11 11 chr20 15233793 15233967 -56919915 + MLT1A1 LTR MaLR 15 188 -177 853 254 15 0 chr20 15234029 15234230 -56919652 + MLT1A1 LTR MaLR 162 365 0 416 332 64 33 chr20 15234287 15234648 -56919234 + LTR16A LTR ERVL 3 374 -76 262 191 0 0 chr20 15235088 15235135 -56918747 + (TG)n Simple_repeat Simple_repeat 1 47 0 216 0 0 0 chr20 15236272 15236296 -56917586 + (TTTTTG)n Simple_repeat Simple_repeat 4 27 0 205 333 95 0 chr20 15236389 15236494 -56917388 + L2 LINE L2 3157 3271 -1 1294 261 46 13 chr20 15237200 15237653 -56916229 + Charlie4a DNA MER1_type 36 503 -5 264 20 20 59 chr20 15238296 15238347 -56915535 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1191 219 48 37 chr20 15239637 15240236 -56913646 + MLT1E1 LTR MaLR 1 654 0 1500 230 54 19 chr20 15240247 15240686 -56913196 - Charlie4a DNA MER1_type -1457 504 45 240 35 0 0 chr20 15240686 15240715 -56913167 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 1500 230 54 19 chr20 15240715 15240758 -56913124 - Charlie4a DNA MER1_type -1916 45 5 313 220 53 38 chr20 15241425 15241557 -56912325 - HAL1 LINE L1 -145 2362 2229 256 268 0 2 chr20 15242098 15242157 -56911725 + MER5B DNA MER1_type 66 118 -60 356 237 23 23 chr20 15243907 15244038 -56909844 + MLT1I LTR MaLR 10 140 -269 1795 173 3 3 chr20 15245608 15245921 -56907961 - AluJb SINE Alu 0 313 1 269 155 0 17 chr20 15246043 15246101 -56907781 - MER116 DNA Mariner -15 65 9 25978 83 6 3 chr20 15246147 15250714 -56903168 - L1PA7 LINE L1 -1 6153 1581 449 263 40 51 chr20 15251308 15251392 -56902490 - MIR SINE MIR -43 219 136 2549 123 3 3 chr20 15251392 15251767 -56902115 + THE1C LTR MaLR 1 375 0 449 263 40 51 chr20 15251767 15251857 -56902025 - MIR SINE MIR -126 136 47 1140 187 83 57 chr20 15252380 15252647 -56901235 - Charlie1 DNA MER1_type -24 2737 2455 1608 176 9 47 chr20 15252647 15252966 -56900916 + AluJo SINE Alu 1 307 -5 1140 187 83 57 chr20 15252966 15253083 -56900799 - Charlie1 DNA MER1_type -306 2455 2343 279 0 0 0 chr20 15253149 15253180 -56900702 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2268 173 37 22 chr20 15253191 15253703 -56900179 + LTR27 LTR ERV1 2 490 -11 385 161 69 0 chr20 15254388 15254475 -56899407 - L1MB7 LINE L1 -9 6175 6083 276 30 0 0 chr20 15254964 15254997 -56898885 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2107 150 0 0 chr20 15255037 15255343 -56898539 - AluSx SINE Alu -6 306 1 250 333 79 30 chr20 15257075 15257240 -56896642 - L2 LINE L2 -20 3293 3121 952 224 246 29 chr20 15258021 15258436 -56895446 + MLT1D LTR MaLR 1 505 0 213 65 0 0 chr20 15260142 15260173 -56893709 + (T)n Simple_repeat Simple_repeat 1 31 0 461 266 140 0 chr20 15261813 15261956 -56891926 + MER5B DNA MER1_type 8 170 -8 625 281 180 32 chr20 15262046 15262207 -56891675 + MLT1H1 LTR MaLR 49 185 -370 1683 179 0 24 chr20 15262207 15262503 -56891379 + AluJo SINE Alu 5 293 -19 625 281 180 32 chr20 15262503 15262775 -56891107 + MLT1H1 LTR MaLR 185 546 -9 1907 231 62 21 chr20 15262844 15263359 -56890523 + MLT1F LTR MaLR 7 542 0 1008 230 99 107 chr20 15264134 15264712 -56889170 - L1MC5 LINE L1 -36 7925 7344 467 179 0 0 chr20 15264712 15264807 -56889075 - L1PA8 LINE L1 -4 6168 6074 1650 143 73 33 chr20 15264815 15265115 -56888767 - AluSx SINE Alu 0 312 1 1008 230 99 107 chr20 15265115 15265650 -56888232 - L1MC5 LINE L1 -624 7337 6815 687 256 77 4 chr20 15265660 15265855 -56888027 - L1MD2 LINE L1 -13 6346 6128 315 0 0 0 chr20 15265855 15265890 -56887992 + (TG)n Simple_repeat Simple_repeat 2 36 0 687 256 77 4 chr20 15265890 15265940 -56887942 - L1MD2 LINE L1 -231 6128 6083 505 253 0 118 chr20 15265940 15266169 -56887713 - L1MC5 LINE L1 -1124 6837 6636 237 33 0 0 chr20 15266556 15266586 -56887296 + (T)n Simple_repeat Simple_repeat 1 30 0 42085 37 25 2 chr20 15266600 15272610 -56881272 - L1PA3 LINE L1 0 6155 1 2001 137 64 14 chr20 15272733 15273077 -56880805 + THE1B LTR MaLR 1 361 -3 11305 99 6 11 chr20 15273077 15273563 -56880319 + THE1B-int LTR MaLR 10 497 -1083 2787 19 0 3 chr20 15273563 15273873 -56880009 + AluYa5 SINE Alu 1 309 -2 11305 99 6 11 chr20 15273873 15274966 -56878916 + THE1B-int LTR MaLR 497 1580 0 2060 148 45 28 chr20 15274966 15275324 -56878558 + THE1B LTR MaLR 1 364 0 210 208 0 0 chr20 15275426 15275479 -56878403 + (TA)n Simple_repeat Simple_repeat 1 53 0 180 0 0 0 chr20 15276158 15276178 -56877704 + (T)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr20 15276443 15276465 -56877417 + AT_rich Low_complexity Low_complexity 1 22 0 510 315 93 42 chr20 15276568 15277073 -56876809 + L1M4 LINE L1 3107 3637 -2509 760 272 40 72 chr20 15277297 15277778 -56876104 + L2 LINE L2 2769 3309 -4 549 256 52 70 chr20 15277792 15278120 -56875762 - HAL1 LINE L1 -1228 1279 958 23 33 0 0 chr20 15278306 15278336 -56875546 + AT_rich Low_complexity Low_complexity 1 30 0 246 128 0 0 chr20 15280492 15280531 -56873351 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 1576 223 87 11 chr20 15284135 15284766 -56869116 - L1P5 LINE L1 -629 5522 4849 4168 148 41 56 chr20 15284775 15285657 -56868225 + L1MA10 LINE L1 5462 6330 -4 2209 293 157 23 chr20 15285659 15287118 -56866764 - L2 LINE L2 -19 3294 1640 963 244 102 68 chr20 15287613 15287966 -56865916 - LTR16A1 LTR ERVL -92 365 1 232 313 154 2 chr20 15288581 15288725 -56865157 + MIR SINE MIR 15 179 -29 3417 193 4 8 chr20 15288776 15289495 -56864387 - L1 LINE L1 -1052 5094 4379 * 4497 176 30 13 chr20 15289488 15290442 -56863440 + L1PB4 LINE L1 5213 6156 0 192 163 0 0 chr20 15290693 15290736 -56863146 + A-rich Low_complexity Low_complexity 1 43 0 327 299 153 0 chr20 15291988 15292145 -56861737 + LTR16C LTR ERVL 311 491 0 348 295 154 32 chr20 15292809 15292848 -56861034 + MER5A DNA MER1_type 9 42 -147 2213 105 3 0 chr20 15292848 15293134 -56860748 - AluSx SINE Alu -23 289 3 348 295 154 32 chr20 15293134 15293250 -56860632 + MER5A DNA MER1_type 42 183 -6 252 301 20 111 chr20 15293287 15293392 -56860490 + L2 LINE L2 2146 2226 -1088 2347 106 0 0 chr20 15293392 15293704 -56860178 + AluSx SINE Alu 1 312 0 252 301 20 111 chr20 15293704 15293797 -56860085 + L2 LINE L2 2226 2326 -988 855 339 55 18 chr20 15294083 15294517 -56859365 + LTR16A LTR ERVL 1 450 0 249 289 167 34 chr20 15294520 15294759 -56859123 + L2 LINE L2 2380 2650 -664 4310 197 93 45 chr20 15295859 15297028 -56856854 - L1MC3 LINE L1 -23 8042 6818 2645 189 38 1 chr20 15297018 15297801 -56856081 - L1MC3 LINE L1 -743 5683 5272 * 3575 224 56 13 chr20 15297798 15299279 -56854603 - L1MB8 LINE L1 0 6178 4642 2089 245 146 29 chr20 15299278 15299823 -56854059 - L1MC3 LINE L1 -1139 5287 4807 * 2595 68 0 0 chr20 15299823 15300132 -56853750 - AluY SINE Alu 0 311 3 2089 245 146 29 chr20 15300132 15300524 -56853358 - L1MC3 LINE L1 -1619 4807 4240 307 204 54 21 chr20 15300521 15300614 -56853268 - L1MC3 LINE L1 -4272 2154 2059 * 1292 162 40 27 chr20 15300586 15300907 -56852975 - L1MC3 LINE L1 -4418 2008 1718 22531 46 3 9 chr20 15300978 15304592 -56849290 + L1PA5 LINE L1 2547 6150 -4 1614 265 40 15 chr20 15304902 15305284 -56848598 + MER110 LTR ERV1 1 399 -92 2246 143 94 8 chr20 15305284 15305676 -56848206 + MSTB LTR MaLR 1 426 0 1614 265 40 15 chr20 15305676 15305772 -56848110 + MER110 LTR ERV1 399 491 0 2297 75 0 26 chr20 15305879 15306186 -56847696 + AluY SINE Alu 1 299 -12 316 265 99 76 chr20 15307582 15307754 -56846128 + L2 LINE L2 2906 3073 -240 1736 134 56 54 chr20 15307754 15308127 -56845755 + THE1C LTR MaLR 2 375 0 316 265 99 76 chr20 15308127 15308297 -56845585 + L2 LINE L2 3073 3256 -57 601 133 25 0 chr20 15309053 15309173 -56844709 + (TCTA)n Simple_repeat Simple_repeat 2 124 0 1704 246 89 13 chr20 15309272 15309813 -56844069 + L1MD3 LINE L1 7404 7985 -10 606 270 80 48 chr20 15309886 15310215 -56843667 - MLT1H LTR MaLR -202 393 41 1081 184 32 9 chr20 15310215 15310432 -56843450 - MLT1A1 LTR MaLR 0 365 144 6895 14 0 0 chr20 15310451 15311235 -56842647 - L1PA3 LINE L1 0 6155 5372 674 217 19 31 chr20 15311235 15311396 -56842486 - MLT1A1 LTR MaLR -206 159 1 206 231 15 0 chr20 15313525 15313590 -56840292 + GA-rich Low_complexity Low_complexity 1 66 0 380 317 22 54 chr20 15313642 15313866 -56840016 - MLT1J2 LTR MaLR -125 325 109 1533 227 119 45 chr20 15313867 15314356 -56839526 + MLT1F LTR MaLR 16 540 -2 382 216 49 10 chr20 15314358 15314460 -56839422 - MLT1J2 LTR MaLR -344 106 1 34482 50 4 2 chr20 15315094 15321212 -56832670 + L1PA5 LINE L1 11 6148 -6 22 0 0 0 chr20 15321427 15321449 -56832433 + AT_rich Low_complexity Low_complexity 1 22 0 1452 254 55 25 chr20 15321466 15321899 -56831983 + LTR16A1 LTR ERVL 1 446 -11 336 185 0 0 chr20 15322707 15322772 -56831110 - L2 LINE L2 -6 3266 3202 284 333 91 16 chr20 15323795 15323981 -56829901 - MIR SINE MIR -58 204 5 23 54 0 0 chr20 15324005 15324042 -56829840 + AT_rich Low_complexity Low_complexity 1 37 0 315 358 69 35 chr20 15325166 15325339 -56828543 + L1ME3A LINE L1 5963 6141 -29 373 257 33 53 chr20 15326745 15326897 -56826985 + MIR SINE MIR 113 261 -1 518 311 16 55 chr20 15328577 15328760 -56825122 - MER5A DNA MER1_type 0 189 14 224 266 152 0 chr20 15329385 15329464 -56824418 + MIR SINE MIR 94 184 -78 294 283 121 10 chr20 15329941 15330040 -56823842 + MIR SINE MIR 1 110 -152 486 0 0 0 chr20 15330049 15330103 -56823779 + (CA)n Simple_repeat Simple_repeat 2 55 0 231 260 0 0 chr20 15330458 15330508 -56823374 + L2 LINE L2 3221 3270 -2 213 387 57 16 chr20 15330979 15331103 -56822779 - L2 LINE L2 -23 3249 3121 265 327 120 27 chr20 15331396 15331546 -56822336 + MIR SINE MIR 20 183 -79 3530 82 2 0 chr20 15333688 15334140 -56819742 + MLT2A2 LTR ERVL 1 453 0 1659 304 140 10 chr20 15335189 15336135 -56817747 + L2 LINE L2 1988 3107 -206 1851 180 47 38 chr20 15336135 15336557 -56817325 - MSTB LTR MaLR 0 426 1 1659 304 140 10 chr20 15336557 15336774 -56817108 + L2 LINE L2 3107 3294 -19 1874 114 84 0 chr20 15336786 15337059 -56816823 - AluSq SINE Alu -17 296 1 242 203 29 87 chr20 15337168 15337237 -56816645 + MER5A DNA MER1_type 41 105 -84 1066 252 76 60 chr20 15338089 15338486 -56815396 - LTR16A1 LTR ERVL 0 457 55 21 36 0 0 chr20 15338565 15338593 -56815289 + AT_rich Low_complexity Low_complexity 1 28 0 510 285 95 15 chr20 15338603 15338777 -56815105 - MIR SINE MIR -41 221 28 2532 48 0 10 chr20 15338777 15339088 -56814794 - AluY SINE Alu -3 308 1 510 285 95 15 chr20 15339088 15339113 -56814769 - MIR SINE MIR -234 28 6 1428 291 60 29 chr20 15339281 15339797 -56814085 - MLT1H LTR MaLR 0 549 18 575 302 66 61 chr20 15340207 15340816 -56813066 - L1MC4a LINE L1 -1896 5912 5301 21 0 0 0 chr20 15340843 15340864 -56813018 + AT_rich Low_complexity Low_complexity 1 21 0 326 285 1 3 chr20 15340892 15341014 -56812868 - L1ME2 LINE L1 0 6170 6049 303 244 126 8 chr20 15341031 15341150 -56812732 - L1MC4a LINE L1 -1139 5007 4875 268 253 22 66 chr20 15341151 15341242 -56812640 - L1ME3 LINE L1 -114 6048 5962 1445 227 105 31 chr20 15341246 15342012 -56811870 - L1ME3 LINE L1 -256 5906 5078 284 241 222 0 chr20 15342017 15342125 -56811757 - L1ME3 LINE L1 -1139 5007 4876 1228 256 43 5 chr20 15342131 15342569 -56811313 - L1ME3 LINE L1 -1320 4826 4372 537 274 128 10 chr20 15342588 15342894 -56810988 - L1ME3 LINE L1 -2168 3978 3637 21 36 0 0 chr20 15342966 15342994 -56810888 + AT_rich Low_complexity Low_complexity 1 28 0 1769 69 0 26 chr20 15343336 15343568 -56810314 + AluY SINE Alu 83 308 -3 767 226 0 26 chr20 15343700 15343855 -56810027 - AluJo SINE Alu -161 151 1 876 298 102 28 chr20 15344096 15344840 -56809042 + HAL1b LINE L1 430 1228 -120 359 278 76 21 chr20 15344844 15344988 -56808894 + HAL1b LINE L1 1187 1338 -10 332 309 120 5 chr20 15345321 15345538 -56808344 + L1ME LINE L1 5545 5786 -335 250 378 65 5 chr20 15345545 15345730 -56808152 - MIR SINE MIR -13 249 54 310 234 145 20 chr20 15345813 15346061 -56807821 - L1ME4a LINE L1 -33 6088 5810 345 276 98 6 chr20 15346132 15346306 -56807576 - L1ME4a LINE L1 -406 5715 5526 465 270 7 13 chr20 15346488 15346640 -56807242 + L1ME3 LINE L1 4864 5014 -1132 2803 206 67 21 chr20 15346698 15346762 -56807120 - L1MB8 LINE L1 -14 6164 6104 412 175 0 0 chr20 15346762 15346842 -56807040 + MADE1 DNA Mariner 1 80 0 2803 206 67 21 chr20 15346842 15347504 -56806378 - L1MB8 LINE L1 -74 6104 5404 709 241 70 51 chr20 15347504 15347760 -56806122 + MSTD LTR MaLR 1 263 -163 633 237 76 50 chr20 15347762 15347905 -56805977 + MSTD LTR MaLR 194 345 -51 2384 140 29 17 chr20 15347905 15348326 -56805556 + MSTB LTR MaLR 1 426 0 633 237 76 50 chr20 15348326 15348380 -56805502 + MSTD LTR MaLR 345 396 0 1071 309 15 2 chr20 15348418 15348813 -56805069 + L1ME3 LINE L1 5755 6154 -8 601 202 0 0 chr20 15349589 15349698 -56804184 - LTR16A1 LTR ERVL 0 457 349 2060 196 22 51 chr20 15349801 15350292 -56803590 + MER31A LTR ERV1 1 477 -8 303 292 26 18 chr20 15350311 15350424 -56803458 - LTR16A1 LTR ERVL -337 120 7 230 216 124 31 chr20 15350495 15350592 -56803290 + MER113 DNA MER1_type? 9 114 -407 1178 235 106 21 chr20 15351186 15351836 -56802046 + L1ME LINE L1 4742 5459 -707 339 374 42 21 chr20 15353301 15353590 -56800292 - L2 LINE L2 -429 2885 2591 469 288 72 40 chr20 15354275 15354497 -56799385 - LTR16A1 LTR ERVL -21 436 208 217 265 36 36 chr20 15355346 15355429 -56798453 - MIR3 SINE MIR -3 205 123 541 244 65 55 chr20 15355735 15355936 -56797946 + MIR SINE MIR 59 261 -1 4114 205 22 2 chr20 15355971 15356836 -56797046 - L1MB7 LINE L1 -27 6157 5276 22 0 0 0 chr20 15356842 15356864 -56797018 + AT_rich Low_complexity Low_complexity 1 22 0 325 299 24 43 chr20 15356864 15357028 -56796854 - L2 LINE L2 -37 3276 3116 455 353 62 24 chr20 15358125 15358417 -56795465 - L2 LINE L2 -6 3307 3005 1094 166 5 0 chr20 15358584 15358783 -56795099 + L1PBa LINE L1 1 200 -6663 9893 180 41 25 chr20 15358783 15362087 -56791795 + L1PBa LINE L1 634 4099 -2763 11446 50 3 5 chr20 15362088 15363545 -56790337 - L1P LINE L1 -4075 2071 617 711 47 0 0 chr20 15363539 15363625 -56790257 - L1P LINE L1 -6048 98 13 * 257 348 15 45 chr20 15363682 15363883 -56789999 + L2 LINE L2 3090 3284 -29 1028 304 78 6 chr20 15363901 15364259 -56789623 - LTR16C LTR ERVL -34 457 74 1062 284 77 17 chr20 15365309 15365777 -56788105 - L1MC4 LINE L1 -9 8033 7538 192 77 0 0 chr20 15365779 15365805 -56788077 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 530 340 21 71 chr20 15366510 15366848 -56787034 - L2 LINE L2 -37 3235 2915 278 281 50 50 chr20 15366881 15367002 -56786880 - MLT1H LTR MaLR 0 549 429 349 239 0 58 chr20 15367795 15367909 -56785973 + MER5A DNA MER1_type 4 109 -80 2356 117 8 8 chr20 15368436 15368787 -56785095 - THE1A LTR MaLR 0 355 5 2174 128 0 0 chr20 15368814 15369119 -56784763 + AluSq SINE Alu 1 305 -8 471 299 0 15 chr20 15369305 15369442 -56784440 + MIR SINE MIR 12 146 -116 277 259 138 26 chr20 15369659 15369886 -56783996 + MLT1G1 LTR MaLR 282 595 0 709 331 38 31 chr20 15370080 15370688 -56783194 - L1MC4a LINE L1 -1925 5883 5272 3997 68 4 0 chr20 15370694 15371212 -56782670 - L1PA8 LINE L1 -11 6161 5642 696 176 99 0 chr20 15371434 15371576 -56782306 - L1PB4 LINE L1 0 6156 6001 354 269 62 7 chr20 15372017 15372162 -56781720 - MARNA DNA Mariner -189 397 245 241 330 11 0 chr20 15372352 15372443 -56781439 + MARNA DNA Mariner 456 547 -39 784 259 35 0 chr20 15372959 15373133 -56780749 + MER5A DNA MER1_type 10 189 0 209 296 28 14 chr20 15373360 15373431 -56780451 - L2 LINE L2 -8 3305 3234 1388 213 45 14 chr20 15373434 15373791 -56780091 - MER39 LTR ERV1 0 707 340 474 233 82 9 chr20 15373849 15374021 -56779861 - MER39 LTR ERV1 -503 155 6 209 375 12 12 chr20 15374026 15374106 -56779776 - L2 LINE L2 -88 3184 3105 235 0 28 28 chr20 15376496 15376532 -56777350 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 253 312 0 26 chr20 15376607 15376684 -56777198 + CT-rich Low_complexity Low_complexity 3 77 0 2135 190 12 5 chr20 15377136 15377552 -56776330 + L1PB3 LINE L1 5729 6147 -7 222 174 0 0 chr20 15377552 15377598 -56776284 + (TA)n Simple_repeat Simple_repeat 1 46 0 2255 183 24 2 chr20 15378498 15378907 -56774975 - MER47B DNA MER2_type 0 418 1 237 384 13 21 chr20 15378921 15379068 -56774814 + MIR SINE MIR 3 139 -69 783 285 26 33 chr20 15379264 15379569 -56774313 + LTR16C LTR ERVL 83 385 -106 2526 122 23 50 chr20 15379704 15380140 -56773742 - MSTC LTR MaLR -4 424 1 474 65 0 0 chr20 15380799 15380861 -56773021 + (TCCA)n Simple_repeat Simple_repeat 3 64 0 208 366 0 15 chr20 15380864 15380998 -56772884 + CT-rich Low_complexity Low_complexity 3 134 0 594 297 56 36 chr20 15381093 15381342 -56772540 + MIR SINE MIR 9 262 0 271 211 78 84 chr20 15382262 15382404 -56771478 - MLT1J2 LTR MaLR -44 406 266 239 358 119 24 chr20 15383624 15383917 -56769965 - L2 LINE L2 -5 3308 2988 496 313 28 22 chr20 15384900 15385079 -56768803 + MIR3 SINE MIR 25 204 -4 231 114 0 0 chr20 15385291 15385326 -56768556 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 393 234 158 38 chr20 15386114 15386272 -56767610 + MER5B DNA MER1_type 2 178 0 1370 113 38 13 chr20 15386381 15386619 -56767263 - L1MA5A LINE L1 -10 6287 6044 194 338 149 14 chr20 15386781 15386929 -56766953 - MIR SINE MIR -74 188 21 478 330 93 56 chr20 15387989 15388234 -56765648 + L3 LINE CR1 733 967 -610 1102 259 56 29 chr20 15388234 15388678 -56765204 + LTR16A1 LTR ERVL 1 456 -1 478 330 93 56 chr20 15388678 15389077 -56764805 + L3 LINE CR1 967 1401 -176 238 292 15 0 chr20 15389352 15389417 -56764465 - L2 LINE L2 0 3313 3248 263 0 81 0 chr20 15389428 15389465 -56764417 + T-rich Low_complexity Low_complexity 2 41 0 183 271 42 42 chr20 15389803 15389851 -56764031 - L2 LINE L2 -69 3203 3156 1692 157 16 33 chr20 15389909 15390214 -56763668 - AluJo SINE Alu -12 300 1 10194 26 0 0 chr20 15390359 15392331 -56761551 - L1PA2 LINE L1 -7 6148 4177 2020 121 3 30 chr20 15392357 15392662 -56761220 + AluSg SINE Alu 1 297 -13 524 192 0 8 chr20 15392916 15393036 -56760846 + GA-rich Low_complexity Low_complexity 2 120 0 2251 116 0 10 chr20 15393870 15394180 -56759702 + AluSx SINE Alu 1 307 -5 331 283 91 63 chr20 15395652 15396088 -56757794 + MLT1H LTR MaLR 3 548 -1 589 317 44 19 chr20 15396383 15396702 -56757180 + L1M3c LINE L1 1356 1682 -5814 296 295 63 32 chr20 15397077 15397267 -56756615 + L1M3c LINE L1 2011 2206 -5360 1642 163 41 7 chr20 15397297 15397567 -56756315 + AluJb SINE Alu 2 280 -32 207 0 0 0 chr20 15397568 15397591 -56756291 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 621 228 6 41 chr20 15397591 15397762 -56756120 + L1M3c LINE L1 2804 2968 -4598 8133 220 35 32 chr20 15397886 15401139 -56752743 + L1MA9 LINE L1 2647 5916 -1649 1084 167 81 25 chr20 15401141 15401262 -56752620 + AluJb SINE Alu 1 139 -173 203 77 0 26 chr20 15401262 15401301 -56752581 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1084 167 81 25 chr20 15401301 15401377 -56752505 + AluJb SINE Alu 139 209 -103 2581 190 30 36 chr20 15401383 15402019 -56751863 + L1MA9 LINE L1 7096 7727 -4 637 203 98 0 chr20 15403062 15403120 -56750762 + LTR47A LTR ERVL 274 325 -127 182 31 0 62 chr20 15403120 15403152 -56750730 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1494 219 0 0 chr20 15403152 15403444 -56750438 - L1PB4 LINE L1 -15 6141 5850 637 203 98 0 chr20 15403444 15403547 -56750335 + LTR47A LTR ERVL 324 452 0 243 194 16 48 chr20 15403903 15403965 -56749917 + MIR SINE MIR 92 151 -57 2647 51 0 6 chr20 15404892 15405205 -56748677 - AluY SINE Alu 0 311 1 4658 123 17 13 chr20 15405942 15406722 -56747160 - L1MA4A LINE L1 -5 6298 5516 1340 237 27 22 chr20 15406722 15407131 -56746751 - L1 LINE L1 -3153 3695 3285 * 8251 177 38 155 chr20 15407107 15409153 -56744729 - L1 LINE L1 -4044 2805 1249 264 30 0 0 chr20 15409153 15409186 -56744696 + (TG)n Simple_repeat Simple_repeat 2 34 0 8251 177 38 155 chr20 15409186 15410269 -56743613 - L1 LINE L1 -5600 1249 41 195 42 0 0 chr20 15410776 15410800 -56743082 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1126 253 107 53 chr20 15410941 15411466 -56742416 - MER119 DNA MER1_type -1 582 30 463 252 139 54 chr20 15411508 15411766 -56742116 + L1ME3A LINE L1 1063 1342 -4863 379 356 28 36 chr20 15411851 15412104 -56741778 + L1ME3A LINE L1 1491 1741 -4655 2294 128 27 3 chr20 15412203 15412569 -56741313 + THE1C LTR MaLR 1 375 0 536 333 36 9 chr20 15412837 15413287 -56740595 + L1ME3A LINE L1 3924 4385 -1830 241 267 53 90 chr20 15413336 15413585 -56740297 + L1ME3A LINE L1 4392 4614 -1601 849 247 18 35 chr20 15413585 15413812 -56740070 - MER58A DNA MER1_type 0 224 2 241 267 53 90 chr20 15413812 15414086 -56739796 + L1ME3A LINE L1 4614 4896 -1319 465 327 51 19 chr20 15414479 15415139 -56738743 + L1ME3A LINE L1 5327 6016 -223 439 241 63 115 chr20 15415801 15415975 -56737907 + MER5B DNA MER1_type 13 177 -1 466 268 20 26 chr20 15417006 15417159 -56736723 - LTR16C LTR ERVL 0 491 340 612 199 7 7 chr20 15417161 15417302 -56736580 + L1MB8 LINE L1 6032 6172 -6 509 279 89 30 chr20 15417337 15417574 -56736308 - LTR16C LTR ERVL -156 335 85 390 232 111 44 chr20 15417746 15418050 -56735832 - LTR49 LTR ERV1 0 595 271 894 183 139 0 chr20 15418070 15418272 -56735610 - MER34C LTR ERV1 -352 233 4 222 265 0 44 chr20 15418742 15418878 -56735004 + A-rich Low_complexity Low_complexity 2 131 0 583 319 65 26 chr20 15419726 15420239 -56733643 + L1MC4a LINE L1 2173 2678 -3537 11715 169 15 2 chr20 15420239 15422316 -56731566 + ERVL LTR ERVL 1375 3509 -2255 958 219 50 10 chr20 15422326 15422527 -56731355 + MLT2B3 LTR ERVL 296 504 -50 543 16 0 0 chr20 15422527 15422591 -56731291 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 1922 159 14 0 chr20 15422728 15423011 -56730871 + AluSx SINE Alu 6 292 -20 655 48 73 12 chr20 15423015 15423180 -56730702 + (TA)n Simple_repeat Simple_repeat 1 175 0 723 331 96 47 chr20 15423459 15424511 -56729371 + L1MC4a LINE L1 4252 5355 -860 430 258 46 36 chr20 15424513 15424707 -56729175 + L1MC4a LINE L1 5364 5559 -2318 1060 274 71 25 chr20 15424718 15425199 -56728683 + L1MC4a LINE L1 5598 6100 -1777 581 318 88 13 chr20 15425426 15425989 -56727893 + L1MC4a LINE L1 5352 5532 -691 22 0 0 0 chr20 15426191 15426213 -56727669 + AT_rich Low_complexity Low_complexity 1 22 0 934 206 15 5 chr20 15426401 15426600 -56727282 - L1PB4 LINE L1 -8 6148 5948 458 207 279 0 chr20 15426666 15426806 -56727076 - MER5A DNA MER1_type -1 188 10 372 298 16 16 chr20 15427785 15427976 -56725906 + L1ME4a LINE L1 5658 5848 -273 21 0 0 0 chr20 15428031 15428052 -56725830 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 15428297 15428318 -56725564 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr20 15428557 15428587 -56725295 + (T)n Simple_repeat Simple_repeat 1 30 0 1453 228 60 36 chr20 15428770 15429218 -56724664 + MLT1C LTR MaLR 9 467 0 471 342 37 25 chr20 15429370 15429724 -56724158 - LTR16C LTR ERVL -35 456 99 270 250 36 54 chr20 15429994 15430162 -56723720 + MLT1K LTR MaLR 389 553 -35 902 181 53 0 chr20 15430191 15430362 -56723520 + MER5A DNA MER1_type 10 189 0 726 197 98 39 chr20 15431308 15431511 -56722371 + MLT1J2 LTR MaLR 48 262 -188 700 254 40 0 chr20 15431539 15431716 -56722166 + MER58A DNA MER1_type 37 220 -4 966 224 18 5 chr20 15433001 15433224 -56720658 - LTR16C LTR ERVL 0 491 266 315 329 44 0 chr20 15433285 15433422 -56720460 - LTR16C LTR ERVL -348 143 1 632 260 29 0 chr20 15434498 15434671 -56719211 - MER5B DNA MER1_type 0 178 1 1020 271 139 33 chr20 15434733 15435158 -56718724 + L2 LINE L2 2320 2789 -525 311 236 91 9 chr20 15435227 15435337 -56718545 + MER103 DNA DNA 17 135 -31 1696 192 48 3 chr20 15435383 15435737 -56718145 + MSTB LTR MaLR 1 370 -56 450 94 0 0 chr20 15435739 15435803 -56718079 + (TTCC)n Simple_repeat Simple_repeat 2 65 0 2177 118 7 0 chr20 15435823 15436111 -56717771 - AluSx SINE Alu -22 290 1 478 97 0 0 chr20 15436111 15436183 -56717699 + MSTB LTR MaLR 355 426 0 2184 71 0 4 chr20 15436492 15436759 -56717123 - AluSq SINE Alu -9 304 39 2501 114 23 46 chr20 15436782 15436969 -56716913 + MSTA LTR MaLR 1 191 -237 2318 92 7 7 chr20 15436969 15437275 -56716607 - AluSg SINE Alu -3 307 2 2501 114 23 46 chr20 15437275 15437525 -56716357 + MSTA LTR MaLR 191 428 0 40688 37 22 1 chr20 15437776 15443800 -56710082 - L1PA2 LINE L1 -1 6154 2 1287 133 0 0 chr20 15445024 15445204 -56708678 - AluSg/x SINE Alu -8 304 125 1605 128 30 40 chr20 15445221 15445348 -56708534 + L1PA16 LINE L1 5872 5999 -167 2317 109 0 0 chr20 15445348 15445652 -56708230 + AluSq SINE Alu 1 304 -9 1605 128 30 40 chr20 15445652 15445822 -56708060 + L1PA16 LINE L1 5999 6166 0 847 310 68 68 chr20 15445837 15446337 -56707545 - L2 LINE L2 -1 3312 2813 324 259 207 22 chr20 15446356 15446491 -56707391 + MER91A DNA MER1_type 15 174 -22 5053 291 106 11 chr20 15446579 15448498 -56705384 - L2 LINE L2 -513 2801 700 5003 169 53 20 chr20 15448568 15449782 -56704100 - L1MC3 LINE L1 0 7785 6476 256 355 0 11 chr20 15449806 15449899 -56703983 + MER20B DNA MER1_type 86 177 -606 283 286 33 0 chr20 15449941 15450032 -56703850 - L2 LINE L2 -2615 699 606 889 310 9 26 chr20 15450103 15450451 -56703431 + MLT1H LTR MaLR 10 351 -198 1604 226 67 36 chr20 15450512 15451055 -56702827 + MLT1F1 LTR MaLR 1 567 0 256 315 11 0 chr20 15451056 15451145 -56702737 + MLT1H LTR MaLR 443 532 -17 271 265 34 86 chr20 15451165 15451282 -56702600 - L2 LINE L2 -2764 550 440 291 54 0 0 chr20 15451751 15451788 -56702094 + (GA)n Simple_repeat Simple_repeat 2 38 0 1283 210 99 55 chr20 15451838 15452272 -56701610 + LTR16A1 LTR ERVL 1 453 -4 318 291 10 10 chr20 15453270 15453373 -56700509 - MIR SINE MIR -71 191 89 25 0 0 0 chr20 15454431 15454456 -56699426 + AT_rich Low_complexity Low_complexity 1 25 0 215 348 71 35 chr20 15454821 15454962 -56698920 + L2 LINE L2 3167 3312 -1 216 219 0 0 chr20 15455572 15455613 -56698269 + (TAA)n Simple_repeat Simple_repeat 1 41 0 244 145 158 26 chr20 15455946 15456022 -56697860 - MER89 LTR ERV1 0 559 474 38 61 0 0 chr20 15456171 15456237 -56697645 + AT_rich Low_complexity Low_complexity 1 66 0 962 212 9 107 chr20 15456582 15457015 -56696867 - MER89 LTR ERV1 -69 490 5 262 167 0 0 chr20 15457396 15457438 -56696444 - tRNA-Asp-GAC tRNA tRNA -33 42 1 441 285 102 7 chr20 15459027 15459164 -56694718 - MER5A DNA MER1_type -30 159 10 246 311 83 44 chr20 15460611 15460791 -56693091 - MIR SINE MIR -8 254 68 409 321 94 6 chr20 15461398 15461557 -56692325 + MIR3 SINE MIR 33 205 -3 267 356 0 0 chr20 15462506 15462621 -56691261 - L1ME LINE L1 -290 5880 5766 568 251 37 37 chr20 15462779 15462942 -56690940 - MER63 DNA MER1_type -273 789 1 231 306 51 44 chr20 15462947 15462999 -56690883 - L1ME LINE L1 -627 5539 5489 342 0 0 0 chr20 15462999 15463037 -56690845 + (CA)n Simple_repeat Simple_repeat 1 38 0 231 306 51 44 chr20 15463037 15463259 -56690623 - L1ME LINE L1 -677 5489 5263 6818 61 5 0 chr20 15463528 15465122 -56688760 - L1PA7 LINE L1 -6 6148 4544 1920 134 11 0 chr20 15465122 15465405 -56688477 - AluSx SINE Alu -26 286 1 711 282 170 47 chr20 15466057 15466271 -56687611 - L1ME LINE L1 -2678 3468 3282 2294 113 0 6 chr20 15466271 15466582 -56687300 - AluSg SINE Alu -1 309 1 711 282 170 47 chr20 15466582 15466903 -56686979 - L1ME LINE L1 -2864 3282 2867 786 179 7 26 chr20 15466922 15467100 -56686782 - FRAM SINE Alu 0 173 1 364 277 32 74 chr20 15467151 15467491 -56686391 - L1MC5 LINE L1 -104 7857 7549 2817 3 0 10 chr20 15467491 15467803 -56686079 - AluYa5 SINE Alu -2 309 1 364 277 32 74 chr20 15467803 15468029 -56685853 - L1MC5 LINE L1 -412 7549 7315 3601 258 63 36 chr20 15468229 15469620 -56684262 + L1ME1 LINE L1 3547 4898 -1268 378 0 0 0 chr20 15469620 15469662 -56684220 + (CA)n Simple_repeat Simple_repeat 2 43 0 3601 258 63 36 chr20 15469662 15470192 -56683690 + L1ME1 LINE L1 4898 5412 -754 2079 127 3 3 chr20 15470192 15470500 -56683382 + AluSx SINE Alu 1 308 -4 3601 258 63 36 chr20 15470500 15471064 -56682818 + L1ME1 LINE L1 5412 6101 -65 2023 152 0 0 chr20 15473460 15473762 -56680120 - AluSx SINE Alu -10 302 1 794 300 37 4 chr20 15476405 15476648 -56677234 - MIR SINE MIR 0 262 12 27 29 0 0 chr20 15477837 15477871 -56676011 + AT_rich Low_complexity Low_complexity 1 34 0 2104 259 16 40 chr20 15477901 15478570 -56675312 + L1M3e LINE L1 466 1118 -6371 1886 232 81 59 chr20 15478585 15479800 -56674082 + L1M3e LINE L1 2137 3308 -4257 2485 28 0 0 chr20 15479800 15480091 -56673791 + L1PA4 LINE L1 5862 6152 -3 1886 232 81 59 chr20 15480091 15480759 -56673123 + L1M3e LINE L1 3308 3960 -3605 * 14851 174 32 20 chr20 15480758 15483703 -56670179 + L1M3e LINE L1 15 2993 -4572 2018 94 38 38 chr20 15483722 15484063 -56669819 + L1MA1 LINE L1 5962 6302 0 8617 206 52 25 chr20 15484063 15486508 -56667374 + L1M3e LINE L1 3946 6458 -1107 4782 201 12 24 chr20 15486504 15487694 -56666188 - L1 LINE L1 -1592 4554 3379 * 25696 28 12 0 chr20 15487694 15491724 -56662158 + L1PA3 LINE L1 2078 6153 -2 272 241 17 0 chr20 15491991 15492049 -56661833 - L2 LINE L2 0 3272 3214 749 307 70 55 chr20 15493033 15493473 -56660409 + LTR16C LTR ERVL 1 447 -44 300 194 15 30 chr20 15497448 15497515 -56656367 + MIR3 SINE MIR 124 189 -19 259 294 15 15 chr20 15497780 15497848 -56656034 - MIR SINE MIR -63 145 78 262 321 39 99 chr20 15497868 15498310 -56655572 - L2 LINE L2 0 3272 2858 1485 182 39 4 chr20 15499157 15499437 -56654445 + AluJo SINE Alu 1 290 -22 428 222 188 0 chr20 15500700 15500817 -56653065 - MER5A DNA MER1_type 0 189 51 588 316 46 1 chr20 15501421 15501618 -56652264 - MIR SINE MIR -16 246 42 267 313 80 0 chr20 15502021 15502171 -56651711 - MLT1L LTR MaLR -8 607 446 2229 104 0 7 chr20 15502195 15502493 -56651389 - AluSx SINE Alu -16 296 1 21 0 0 0 chr20 15503248 15503269 -56650613 + AT_rich Low_complexity Low_complexity 1 21 0 215 219 0 96 chr20 15503631 15503704 -56650178 + MIR SINE MIR 195 260 -2 376 345 62 0 chr20 15503756 15503901 -56649981 + MIR SINE MIR 13 166 -96 238 264 14 0 chr20 15503939 15504011 -56649871 + (CTA)n Simple_repeat Simple_repeat 2 74 0 669 248 85 99 chr20 15504094 15504635 -56649247 - MLT1G LTR MaLR -17 578 34 216 0 0 0 chr20 15505326 15505350 -56648532 + (CA)n Simple_repeat Simple_repeat 2 25 0 1458 251 96 7 chr20 15506092 15506542 -56647340 + MLT2F LTR ERVL 1 490 -173 275 140 20 0 chr20 15506546 15506596 -56647286 + MLT2F LTR ERVL 613 663 0 338 277 68 47 chr20 15507866 15508014 -56645868 + MIR SINE MIR 38 188 -74 280 344 0 86 chr20 15509393 15509544 -56644338 + L2 LINE L2 3134 3271 -1 222 372 33 44 chr20 15510017 15510200 -56643682 + L2 LINE L2 2014 2194 -1120 205 229 14 29 chr20 15510260 15510330 -56643552 + L2 LINE L2 2323 2391 -923 277 241 25 0 chr20 15510506 15510585 -56643297 - MER103 DNA DNA -71 95 15 630 271 5 5 chr20 15510950 15511138 -56642744 + LTR16A1 LTR ERVL 249 436 -21 185 386 0 0 chr20 15511154 15511242 -56642640 + L2 LINE L2 2573 2660 -654 205 414 7 7 chr20 15511354 15511494 -56642388 + L2 LINE L2 2871 3010 -262 360 0 0 0 chr20 15512541 15512581 -56641301 + (CA)n Simple_repeat Simple_repeat 2 41 0 1602 249 71 31 chr20 15512824 15513346 -56640536 - MLT1H LTR MaLR 0 549 7 2582 118 3 0 chr20 15513610 15513999 -56639883 + L1PA14 LINE L1 5769 6158 -3 21 57 0 0 chr20 15513999 15514034 -56639848 + AT_rich Low_complexity Low_complexity 1 35 0 633 239 82 53 chr20 15514081 15514324 -56639558 - MIR SINE MIR 0 262 13 543 213 149 0 chr20 15514389 15514530 -56639352 - MER5B DNA MER1_type 0 178 17 2373 105 11 35 chr20 15514544 15514917 -56638965 - THE1B LTR MaLR 0 364 1 260 263 35 0 chr20 15514927 15514984 -56638898 + MER5A DNA MER1_type 17 75 -114 708 183 0 8 chr20 15514987 15515107 -56638775 + FLAM_C SINE Alu 3 121 -22 505 298 16 0 chr20 15515119 15515240 -56638642 + MER5A DNA MER1_type 64 186 -3 276 263 142 27 chr20 15515251 15515394 -56638488 + MER5A DNA MER1_type 1 187 -2 207 0 0 0 chr20 15515995 15516018 -56637864 + (A)n Simple_repeat Simple_repeat 1 23 0 418 239 20 78 chr20 15516249 15516364 -56637518 + MER5A DNA MER1_type 9 105 -73 605 211 51 99 chr20 15516735 15517047 -56636835 - LTR16A1 LTR ERVL -152 305 9 1675 198 22 19 chr20 15517047 15517411 -56636471 + MLT1A1 LTR MaLR 1 365 0 393 347 36 21 chr20 15517602 15517795 -56636087 + MLT1K LTR MaLR 38 233 -355 238 270 0 0 chr20 15518092 15518181 -56635701 - L1MC4 LINE L1 -1339 6703 6615 276 185 0 0 chr20 15518182 15518236 -56635646 + (TA)n Simple_repeat Simple_repeat 2 55 0 24 0 0 0 chr20 15518501 15518525 -56635357 + AT_rich Low_complexity Low_complexity 1 24 0 2141 133 3 0 chr20 15518963 15519265 -56634617 - AluSq SINE Alu -10 303 1 207 316 82 31 chr20 15519311 15519409 -56634473 - MIR SINE MIR -133 129 27 1729 64 5 0 chr20 15520103 15520322 -56633560 - AluY SINE Alu -7 304 85 419 357 75 8 chr20 15520851 15521092 -56632790 + MLT1K LTR MaLR 191 447 -141 489 133 407 7 chr20 15521731 15521866 -56632016 - MER5A DNA MER1_type 0 189 1 27 29 0 0 chr20 15522635 15522669 -56631213 + AT_rich Low_complexity Low_complexity 1 34 0 307 315 164 24 chr20 15522838 15523051 -56630831 + L2 LINE L2 3028 3270 -2 291 353 111 0 chr20 15523342 15523532 -56630350 - MIR SINE MIR -50 212 2 2053 196 72 57 chr20 15524104 15524733 -56629149 + LTR9B LTR ERV1 7 644 0 378 219 82 104 chr20 15525123 15525306 -56628576 - L2 LINE L2 0 3313 3135 25 51 0 0 chr20 15525326 15525365 -56628517 + AT_rich Low_complexity Low_complexity 1 39 0 563 291 101 32 chr20 15525370 15525648 -56628234 - L2 LINE L2 -153 3160 2864 7946 248 79 54 chr20 15526024 15528924 -56624958 - L1MC3 LINE L1 -436 7767 4939 2214 108 3 3 chr20 15528924 15529230 -56624652 - AluSx SINE Alu -6 306 1 7946 248 79 54 chr20 15529230 15529890 -56623992 - L1MC3 LINE L1 -3264 4939 4297 535 99 0 12 chr20 15529890 15529971 -56623911 + MADE1 DNA Mariner 1 80 0 7946 248 79 54 chr20 15529971 15530091 -56623791 - L1MC3 LINE L1 -3906 4297 4181 186 43 0 0 chr20 15530091 15530114 -56623768 + (CA)n Simple_repeat Simple_repeat 2 24 0 7946 248 79 54 chr20 15530114 15531393 -56622489 - L1MC3 LINE L1 -4022 4181 2690 1059 247 32 40 chr20 15531539 15531944 -56621938 - L1MC3 LINE L1 -5069 976 575 1502 261 28 37 chr20 15532046 15532609 -56621273 - L1MC3 LINE L1 -5481 564 7 529 177 16 8 chr20 15532668 15532792 -56621090 - L1MB2 LINE L1 -3 6168 6044 29 0 0 0 chr20 15532800 15532829 -56621053 + AT_rich Low_complexity Low_complexity 1 29 0 1060 120 0 0 chr20 15532838 15533005 -56620877 - L1MA4 LINE L1 -7 6293 6127 3079 200 39 27 chr20 15533016 15533367 -56620515 - L1MB3 LINE L1 -149 6034 5689 2261 104 0 10 chr20 15533367 15533675 -56620207 - AluSg SINE Alu -5 305 1 3079 200 39 27 chr20 15533675 15534068 -56619814 - L1MB3 LINE L1 -494 5689 5281 * 4780 204 29 10 chr20 15534053 15535653 -56618229 - L1MC2 LINE L1 -10 6334 4705 441 0 0 0 chr20 15536261 15536310 -56617572 + (CA)n Simple_repeat Simple_repeat 2 50 0 207 191 21 0 chr20 15537619 15537666 -56616216 + L2 LINE L2 3264 3311 -2 201 250 0 0 chr20 15537748 15537788 -56616094 + (CA)n Simple_repeat Simple_repeat 1 40 0 812 230 11 21 chr20 15537788 15537979 -56615903 - MER5A DNA MER1_type 0 189 1 1678 275 90 8 chr20 15538996 15539531 -56614351 - MER119 DNA MER1_type 0 583 5 1524 202 48 71 chr20 15539556 15540032 -56613850 + MLT1C LTR MaLR 1 465 -2 348 262 127 93 chr20 15540287 15540524 -56613358 + MLT1J LTR MaLR 230 474 -37 411 299 15 54 chr20 15540804 15541008 -56612874 - L2 LINE L2 -4 3309 3114 1370 192 58 33 chr20 15541013 15541233 -56612649 - MLT1B LTR MaLR 0 390 152 2307 103 3 0 chr20 15541233 15541533 -56612349 + AluSp SINE Alu 1 301 -12 1370 192 58 33 chr20 15541533 15541659 -56612223 - MLT1B LTR MaLR -238 152 31 1846 194 15 50 chr20 15541660 15542120 -56611762 + L1MB7 LINE L1 5722 6165 -19 730 291 36 8 chr20 15542449 15542696 -56611186 + MIR SINE MIR 8 261 -1 2068 140 0 34 chr20 15542985 15543353 -56610529 - AluSx SINE Alu 0 357 1 644 181 105 23 chr20 15543417 15543588 -56610294 + MLT1B LTR MaLR 1 185 -189 759 216 53 11 chr20 15543639 15543829 -56610053 + MLT1B LTR MaLR 188 385 -5 534 222 0 102 chr20 15544756 15544981 -56608901 + MER3 DNA MER1_type 8 209 0 21 0 0 0 chr20 15546871 15546892 -56606990 + AT_rich Low_complexity Low_complexity 1 21 0 1261 261 131 4 chr20 15547184 15547402 -56606480 - MLT1H LTR MaLR -2 547 358 180 0 0 0 chr20 15547402 15547422 -56606460 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1261 261 131 4 chr20 15547422 15547655 -56606227 - MLT1H LTR MaLR -191 358 39 563 186 7 28 chr20 15548311 15548456 -56605426 - Charlie5 DNA MER1_type -27 2585 2444 237 314 0 0 chr20 15548529 15548599 -56605283 + L2 LINE L2 3203 3272 0 21 0 0 0 chr20 15549460 15549481 -56604401 + AT_rich Low_complexity Low_complexity 1 21 0 942 176 0 19 chr20 15549590 15549749 -56604133 + FRAM SINE Alu 1 156 -10 580 316 7 0 chr20 15551112 15551267 -56602615 + L2 LINE L2 3158 3313 0 1235 280 95 30 chr20 15552023 15552562 -56601320 - MLT1E LTR MaLR -11 582 9 21 0 0 0 chr20 15552608 15552629 -56601253 + AT_rich Low_complexity Low_complexity 1 21 0 466 307 17 39 chr20 15552629 15552808 -56601074 - MIR SINE MIR -21 241 67 1029 163 87 117 chr20 15553520 15553820 -56600062 + AluJb SINE Alu 17 307 -5 2744 263 64 8 chr20 15554087 15554256 -56599626 + L1M4 LINE L1 3553 3711 -2435 2257 110 0 0 chr20 15554256 15554555 -56599327 + AluSx SINE Alu 1 299 -13 2744 263 64 8 chr20 15554555 15554955 -56598927 + L1M4 LINE L1 3711 4087 -2059 207 100 0 0 chr20 15554955 15554985 -56598897 + (CAAT)n Simple_repeat Simple_repeat 3 32 0 2744 263 64 8 chr20 15554985 15555484 -56598398 + L1M4 LINE L1 4087 4681 -1465 685 63 0 0 chr20 15555485 15555580 -56598302 + L1MD1 LINE L1 6148 6242 0 26 0 0 0 chr20 15556256 15556282 -56597600 + AT_rich Low_complexity Low_complexity 1 26 0 1930 99 0 99 chr20 15556337 15556535 -56597347 + L1PA15 LINE L1 5847 5996 -169 2442 93 0 0 chr20 15556535 15556846 -56597036 + AluY SINE Alu 1 311 0 1930 99 0 99 chr20 15556846 15556999 -56596883 + L1PA15 LINE L1 5996 6163 -2 304 283 40 10 chr20 15558348 15558447 -56595435 - L3 LINE CR1 -261 1316 1215 187 319 43 11 chr20 15558765 15558859 -56595023 - MIR SINE MIR -81 127 31 2256 116 7 0 chr20 15559362 15559672 -56594210 - AluSx SINE Alu 0 312 1 677 283 63 0 chr20 15559777 15560000 -56593882 + LTR16C LTR ERVL 255 491 0 371 294 56 25 chr20 15561098 15561295 -56592587 + LTR16A1 LTR ERVL 182 384 -73 475 308 62 25 chr20 15561750 15561990 -56591892 - MIR SINE MIR 0 262 14 1620 187 61 19 chr20 15562212 15562591 -56591291 - MSTD LTR MaLR 0 396 2 33 0 0 0 chr20 15563048 15563081 -56590801 + AT_rich Low_complexity Low_complexity 1 33 0 691 260 128 13 chr20 15564395 15564793 -56589089 + MLT1G3 LTR MaLR 32 583 -12 1705 187 0 41 chr20 15565324 15565640 -56588242 - AluJo SINE Alu -9 303 1 30 0 0 0 chr20 15565688 15565718 -56588164 + AT_rich Low_complexity Low_complexity 1 30 0 324 200 25 100 chr20 15565772 15565892 -56587990 - MER58C DNA MER1_type 0 215 105 315 238 86 19 chr20 15565903 15566008 -56587874 - MER58C DNA MER1_type -84 131 20 596 184 22 15 chr20 15566290 15566426 -56587456 + MER103 DNA DNA 11 147 -19 742 178 0 0 chr20 15566507 15566636 -56587246 - L1PB4 LINE L1 0 6156 6028 183 323 16 0 chr20 15567190 15567252 -56586630 - L2 LINE L2 0 3313 3251 452 274 161 9 chr20 15568513 15568736 -56585146 + MLT1K LTR MaLR 319 575 -13 235 246 0 15 chr20 15569082 15569147 -56584735 - LTR16C LTR ERVL -136 355 292 252 193 123 105 chr20 15569268 15569382 -56584500 - MIR SINE MIR -72 136 21 260 192 64 58 chr20 15569432 15569588 -56584294 + MER113 DNA MER1_type? 28 184 -337 256 330 0 31 chr20 15569689 15569786 -56584096 + MIR SINE MIR 169 262 0 269 156 156 31 chr20 15570916 15570980 -56582902 - LTR16C LTR ERVL 0 491 420 1452 48 21 0 chr20 15571146 15571334 -56582548 + LOR1b-int LTR ERV1 5848 6039 -2081 525 167 11 0 chr20 15571336 15571426 -56582456 + LOR1b-int LTR ERV1 8030 8120 0 2350 153 66 14 chr20 15571426 15571863 -56582019 + LOR1b LTR ERV1 1 460 -1 746 105 0 0 chr20 15572136 15572231 -56581651 - LTR12 LTR ERV1 0 714 620 747 235 71 6 chr20 15572711 15572881 -56581001 - MIR SINE MIR -81 181 1 297 294 56 40 chr20 15573043 15573169 -56580713 + MIR SINE MIR 57 184 -78 2704 83 6 0 chr20 15573193 15573543 -56580339 + L1P LINE L1 2 353 -5793 753 193 223 55 chr20 15573660 15573726 -56580156 + MER69 DNA AcHobo 78 132 -2394 2270 162 37 5 chr20 15573726 15574157 -56579725 - L1MB7 LINE L1 0 6184 5740 753 193 223 55 chr20 15574157 15574328 -56579554 + MER69 DNA AcHobo 132 355 -2171 811 161 0 2 chr20 15574337 15574537 -56579345 + MSTC LTR MaLR 3 249 -179 * 1812 140 30 0 chr20 15574535 15574800 -56579082 + MSTC LTR MaLR 66 338 -90 338 161 86 86 chr20 15574900 15574981 -56578901 - LTR30 LTR ERV1 -84 614 479 5287 181 90 51 chr20 15574981 15576216 -56577666 - pTR5 LTR ERV1 -413 2025 743 1510 146 32 0 chr20 15576407 15576653 -56577229 + Tigger7 DNA MER2_type 2238 2491 0 243 378 0 0 chr20 15577244 15577355 -56576527 + MIR3 SINE MIR 44 154 -54 22 0 0 0 chr20 15577980 15578002 -56575880 + AT_rich Low_complexity Low_complexity 1 22 0 226 221 13 39 chr20 15578304 15578381 -56575501 + MIR SINE MIR 76 150 -58 874 252 71 45 chr20 15579160 15579470 -56574412 - MLT1H LTR MaLR -195 354 37 218 354 0 0 chr20 15579525 15579621 -56574261 + (TG)n Simple_repeat Simple_repeat 2 97 0 359 281 215 0 chr20 15579867 15580002 -56573880 + MIR SINE MIR 20 183 -79 1301 203 92 21 chr20 15580776 15581165 -56572717 - MER113 DNA MER1_type? -96 425 9 298 152 0 0 chr20 15581198 15581244 -56572638 - L2 LINE L2 -1 3312 3267 235 318 91 45 chr20 15581279 15581521 -56572361 - L2 LINE L2 -477 2837 2585 207 261 29 72 chr20 15581516 15581585 -56572297 + L2 LINE L2 3207 3272 0 * 441 283 88 13 chr20 15581631 15581790 -56572092 - MIR3 SINE MIR 0 208 38 1173 277 102 13 chr20 15581972 15582365 -56571517 - MLT1K LTR MaLR -144 444 17 825 275 26 70 chr20 15582401 15582714 -56571168 + L2 LINE L2 2962 3260 -12 294 187 13 32 chr20 15583703 15583858 -56570024 + GA-rich Low_complexity Low_complexity 1 152 0 373 207 14 27 chr20 15583999 15584072 -56569810 - AluS SINE Alu -237 66 1 1358 181 47 29 chr20 15584094 15584371 -56569511 - AluJo SINE Alu -30 282 1 189 175 0 0 chr20 15584475 15584515 -56569367 + G-rich Low_complexity Low_complexity 4 43 0 1690 250 40 10 chr20 15585345 15585749 -56568133 + LTR16C LTR ERVL 69 484 -7 293 296 74 127 chr20 15585949 15586233 -56567649 + L2 LINE L2 3004 3272 0 653 218 108 98 chr20 15586693 15587009 -56566873 - MER102b DNA MER1_type -17 324 6 691 242 23 51 chr20 15587367 15587582 -56566300 - MIR SINE MIR -48 214 6 353 248 97 35 chr20 15587677 15587822 -56566060 + MIR SINE MIR 7 160 -102 433 293 80 100 chr20 15588230 15588897 -56564985 + L2 LINE L2 2637 3272 0 201 268 18 0 chr20 15588897 15588953 -56564929 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 448 285 23 41 chr20 15589425 15589597 -56564285 + MIR3 SINE MIR 9 177 -31 697 191 227 0 chr20 15590955 15591180 -56562702 - L2 LINE L2 -598 2716 2441 190 302 94 19 chr20 15591203 15591362 -56562520 + L2 LINE L2 2481 2651 -663 482 269 0 22 chr20 15591652 15591786 -56562096 + MIR SINE MIR 23 153 -109 406 227 127 0 chr20 15591894 15592004 -56561878 + MIR SINE MIR 22 145 -117 180 296 0 19 chr20 15592507 15592561 -56561321 + MIR SINE MIR 90 142 -66 210 207 0 0 chr20 15592683 15592741 -56561141 + (CA)n Simple_repeat Simple_repeat 1 58 0 358 306 52 8 chr20 15592862 15592996 -56560886 - MIR SINE MIR -77 185 46 273 222 32 0 chr20 15593127 15593190 -56560692 + MIR SINE MIR 82 146 -62 423 248 130 0 chr20 15593631 15593801 -56560081 - MIR SINE MIR -33 229 43 190 234 141 0 chr20 15594815 15594879 -56559003 + L2 LINE L2 3026 3098 -174 624 243 123 65 chr20 15595217 15595374 -56558508 - L2 LINE L2 -248 3065 2918 1759 142 43 0 chr20 15595374 15595656 -56558226 + AluSg SINE Alu 1 294 -16 624 243 123 65 chr20 15595656 15595875 -56558007 - L2 LINE L2 -395 2918 2661 236 208 0 0 chr20 15595876 15595924 -56557958 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 261 281 0 24 chr20 15596532 15596614 -56557268 + GA-rich Low_complexity Low_complexity 2 81 0 701 255 5 32 chr20 15596623 15596811 -56557071 - MIR SINE MIR -19 243 61 641 323 62 50 chr20 15597246 15597630 -56556252 - L2 LINE L2 -1 3271 2883 330 366 16 21 chr20 15597918 15598104 -56555778 + MIR SINE MIR 38 222 -40 618 264 108 35 chr20 15598182 15598410 -56555472 + MIR SINE MIR 17 262 0 237 209 0 0 chr20 15599509 15599552 -56554330 - MIR SINE MIR -55 153 111 556 257 17 0 chr20 15599562 15599728 -56554154 + MIR SINE MIR 20 187 -50 351 232 0 58 chr20 15601529 15601643 -56552239 - MER5A DNA MER1_type -80 109 4 285 281 50 50 chr20 15602437 15602558 -56551324 + MLT1H LTR MaLR 429 549 0 497 340 21 71 chr20 15602591 15602929 -56550953 + L2 LINE L2 2915 3235 -37 192 77 0 0 chr20 15603634 15603660 -56550222 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1031 284 77 17 chr20 15603662 15604130 -56549752 + L1MC4 LINE L1 7538 8033 -9 1047 304 78 6 chr20 15605180 15605538 -56548344 + LTR16C LTR ERVL 74 457 -34 270 322 20 47 chr20 15605608 15605757 -56548125 - L2 LINE L2 -79 3234 3090 729 47 0 0 chr20 15605814 15605900 -56547982 + L1PA3 LINE L1 13 98 -6048 * 39237 33 10 1 chr20 15605894 15611387 -56542495 + L1PA3 LINE L1 617 6153 -2 268 241 17 0 chr20 15611654 15611712 -56542170 - L2 LINE L2 0 3272 3214 896 296 77 61 chr20 15612696 15613136 -56540746 + LTR16C LTR ERVL 1 447 -44 30 69 0 0 chr20 15613860 15613918 -56539964 + AT_rich Low_complexity Low_complexity 1 58 0 234 328 76 8 chr20 15614089 15614220 -56539662 + MIR SINE MIR 53 192 -70 835 204 26 87 chr20 15614380 15614611 -56539271 + MER20 DNA MER1_type 3 219 0 296 231 124 43 chr20 15614777 15614909 -56538973 + MLT1I LTR MaLR 20 171 -238 335 226 87 78 chr20 15615057 15615172 -56538710 + MLT1H LTR MaLR 421 536 -13 296 94 19 0 chr20 15615593 15615646 -56538236 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 2211 78 0 0 chr20 15616280 15616595 -56537287 + AluY SINE Alu 1 315 0 3707 198 66 23 chr20 15616658 15617273 -56536609 - L1MD1 LINE L1 -107 6529 5942 5103 91 100 13 chr20 15617273 15618033 -56535849 - LTR12 LTR ERV1 0 826 1 3707 198 66 23 chr20 15618033 15618568 -56535314 - L1MD1 LINE L1 -694 5942 5336 7004 176 10 1 chr20 15618606 15620688 -56533194 - L1PA13 LINE L1 0 6163 4055 1773 247 42 27 chr20 15620695 15621360 -56532522 - L1MD1 LINE L1 -1198 5342 4668 238 284 29 48 chr20 15621366 15621574 -56532308 - L1MD1 LINE L1 -2542 3998 3795 2087 223 35 67 chr20 15621641 15622205 -56531677 + MLT2B3 LTR ERVL 1 546 -8 2253 258 87 13 chr20 15622207 15623230 -56530652 - L1MD1 LINE L1 -2897 3643 2516 1165 244 103 0 chr20 15623221 15623569 -56530313 - L1MD1 LINE L1 -6129 411 28 * 389 320 126 5 chr20 15623587 15623793 -56530089 + MIR SINE MIR 31 261 -1 235 319 0 0 chr20 15623794 15623866 -56530016 + (TTA)n Simple_repeat Simple_repeat 2 73 0 285 303 0 0 chr20 15625013 15625079 -56528803 + MIR SINE MIR 123 188 -74 276 193 42 32 chr20 15626450 15626545 -56527337 + MIR SINE MIR 86 183 -63 276 297 14 81 chr20 15627023 15627171 -56526711 - MIR SINE MIR -14 248 111 768 272 86 13 chr20 15628429 15628661 -56525221 - MIR SINE MIR -10 252 4 305 301 0 53 chr20 15628703 15628816 -56525066 + MIR SINE MIR 128 234 -28 240 35 0 0 chr20 15628881 15628910 -56524972 + (ATG)n Simple_repeat Simple_repeat 1 29 0 223 341 119 8 chr20 15631156 15631282 -56522600 + MIR SINE MIR 21 160 -102 21 36 0 0 chr20 15631319 15631347 -56522535 + AT_rich Low_complexity Low_complexity 1 28 0 232 196 0 22 chr20 15631348 15631394 -56522488 - MIR SINE MIR -1 261 217 352 325 63 16 chr20 15631404 15631595 -56522287 - L1ME3A LINE L1 -1 6169 5970 1095 133 13 0 chr20 15631669 15631827 -56522055 - AluSg/x SINE Alu -18 294 135 441 117 0 0 chr20 15631827 15631887 -56521995 - AluSq SINE Alu -111 202 143 1460 122 0 24 chr20 15631887 15632100 -56521782 - AluSq SINE Alu -103 210 3 1329 282 50 25 chr20 15632101 15632950 -56520932 - L1ME3A LINE L1 -213 5949 5083 261 0 0 0 chr20 15633261 15633290 -56520592 + (CA)n Simple_repeat Simple_repeat 1 29 0 361 321 105 12 chr20 15633622 15633784 -56520098 - MIR3 SINE MIR -11 197 21 22 70 0 0 chr20 15633953 15633996 -56519886 + AT_rich Low_complexity Low_complexity 1 43 0 2014 229 35 43 chr20 15634012 15634640 -56519242 + L1ME3A LINE L1 5318 5940 -230 1148 216 4 13 chr20 15634646 15634877 -56519005 - MER8 DNA MER2_type 0 239 11 394 202 92 140 chr20 15634887 15635115 -56518767 + L1ME3A LINE L1 5954 6170 0 304 258 101 25 chr20 15635775 15635934 -56517948 - MIR SINE MIR -72 190 20 285 196 22 11 chr20 15636657 15636749 -56517133 + (CA)n Simple_repeat Simple_repeat 1 93 0 401 286 9 0 chr20 15636778 15636883 -56516999 + MIR SINE MIR 34 139 -123 358 319 58 10 chr20 15637033 15637240 -56516642 + L3 LINE CR1 1308 1524 -53 379 339 119 0 chr20 15637637 15637805 -56516077 + LTR16C LTR ERVL 65 252 -239 354 289 16 8 chr20 15637806 15637927 -56515955 + LTR16C LTR ERVL 367 488 -3 237 245 75 43 chr20 15638076 15638170 -56515712 + L2 LINE L2 3163 3259 -13 1029 273 33 15 chr20 15638321 15638717 -56515165 - L1ME3A LINE L1 -189 5981 5579 675 146 9 0 chr20 15638765 15638875 -56515007 + FLAM_C SINE Alu 1 111 -32 350 38 50 38 chr20 15638881 15638961 -56514921 + (TA)n Simple_repeat Simple_repeat 2 82 0 870 237 0 0 chr20 15638961 15639130 -56514752 + AluJb SINE Alu 135 303 -9 30 45 0 0 chr20 15639139 15639183 -56514699 + AT_rich Low_complexity Low_complexity 1 44 0 276 317 21 49 chr20 15639362 15639504 -56514378 - LTR16C LTR ERVL -281 210 73 24 0 0 0 chr20 15640095 15640119 -56513763 + AT_rich Low_complexity Low_complexity 1 24 0 228 67 0 0 chr20 15640967 15640997 -56512885 + (CA)n Simple_repeat Simple_repeat 1 30 0 816 200 0 0 chr20 15640998 15641143 -56512739 + MER82 DNA MER2_type 2 146 -507 1870 237 11 26 chr20 15641577 15642032 -56511850 + MER82 DNA MER2_type 200 647 -6 339 325 45 13 chr20 15642334 15642491 -56511391 + MIR SINE MIR 51 212 -50 325 280 110 0 chr20 15642660 15642760 -56511122 + MLT1I LTR MaLR 232 342 -67 196 250 136 45 chr20 15643178 15643266 -56510616 - L2 LINE L2 -300 2972 2877 532 273 91 6 chr20 15644271 15644447 -56509435 + MIR SINE MIR 72 262 0 405 228 73 49 chr20 15644443 15644566 -56509316 - MIR SINE MIR -64 198 73 * 358 323 115 38 chr20 15644752 15645117 -56508765 - L1ME2 LINE L1 -259 5905 5510 2540 47 3 0 chr20 15645369 15645665 -56508217 - AluY SINE Alu -8 303 7 230 176 33 22 chr20 15646759 15646850 -56507032 + (CATA)n Simple_repeat Simple_repeat 3 94 0 314 168 9 28 chr20 15646897 15647004 -56506878 + (CA)n Simple_repeat Simple_repeat 2 106 0 332 198 0 12 chr20 15648043 15648124 -56505758 + CT-rich Low_complexity Low_complexity 2 81 0 407 341 145 21 chr20 15648855 15649339 -56504543 + MLT1K LTR MaLR 3 546 -42 317 327 176 7 chr20 15649560 15649713 -56504169 - MER5A DNA MER1_type 0 189 11 376 230 73 79 chr20 15652036 15652214 -56501668 + MIR3 SINE MIR 32 208 0 * 805 290 88 64 chr20 15652203 15652988 -56500894 + L2 LINE L2 2471 3293 -20 1830 79 19 11 chr20 15652994 15653261 -56500621 + L1PA8A LINE L1 5835 6103 -28 830 269 61 19 chr20 15653643 15653955 -56499927 + LTR16C LTR ERVL 161 485 -6 582 284 87 29 chr20 15654144 15654352 -56499530 + MIR SINE MIR 22 241 -21 4760 174 45 21 chr20 15654924 15654990 -56498892 - L1MA9 LINE L1 -3 6309 6246 218 32 32 0 chr20 15654990 15655021 -56498861 + (TA)n Simple_repeat Simple_repeat 1 32 0 4760 174 45 21 chr20 15655021 15655075 -56498807 - L1MA9 LINE L1 -66 6246 6195 192 77 0 0 chr20 15655075 15655101 -56498781 + (TG)n Simple_repeat Simple_repeat 1 26 0 4760 174 45 21 chr20 15655101 15656085 -56497797 - L1MA9 LINE L1 -117 6195 5237 1685 168 32 0 chr20 15656085 15656365 -56497517 - AluSx SINE Alu -9 303 15 4760 174 45 21 chr20 15656365 15656483 -56497399 - L1MA9 LINE L1 -1075 5237 5123 7410 38 3 0 chr20 15656483 15657563 -56496319 + L1PA4 LINE L1 5071 6153 -2 4760 174 45 21 chr20 15657563 15657825 -56496057 - L1MA9 LINE L1 -1189 5123 4787 2182 167 56 31 chr20 15658427 15658841 -56495041 - MSTB LTR MaLR -2 424 1 439 317 25 50 chr20 15659696 15659895 -56493987 + MIR SINE MIR 66 259 -3 592 233 0 0 chr20 15660523 15660639 -56493243 + MER45A DNA AcHobo 35 150 -28 8776 190 64 15 chr20 15660959 15662844 -56491038 - L1MA4A LINE L1 -5 7000 4866 2239 61 64 0 chr20 15662844 15663124 -56490758 - AluY SINE Alu -12 299 2 8776 190 64 15 chr20 15663124 15664616 -56489266 - L1MA4A LINE L1 -2139 4866 3448 1568 128 0 9 chr20 15664618 15664836 -56489046 - AluSg/x SINE Alu -24 288 73 3202 232 42 96 chr20 15664836 15667391 -56486491 - L1MA4A LINE L1 -4083 2766 6 1945 82 0 4 chr20 15667984 15668240 -56485642 - AluY SINE Alu -1 310 56 41039 31 23 1 chr20 15668523 15674542 -56479340 + L1HS LINE L1 4 6153 -2 195 393 11 0 chr20 15674588 15674677 -56479205 + L2 LINE L2 2698 2787 -527 344 258 11 22 chr20 15674816 15674905 -56478977 + L2 LINE L2 3170 3257 -15 4644 111 3 8 chr20 15674985 15675600 -56478282 + LTR9 LTR ERV1 1 612 0 32 26 0 0 chr20 15675724 15675763 -56478119 + AT_rich Low_complexity Low_complexity 1 39 0 621 138 37 28 chr20 15675906 15676015 -56477867 + MSTC LTR MaLR 1 110 -318 2451 71 0 10 chr20 15676048 15676357 -56477525 - AluY SINE Alu -5 306 1 769 215 45 6 chr20 15676412 15676589 -56477293 + MIR SINE MIR 66 249 -13 231 36 0 0 chr20 15676591 15676619 -56477263 + (TTA)n Simple_repeat Simple_repeat 2 29 0 189 311 73 53 chr20 15677273 15677424 -56476458 - L2 LINE L2 -21 3292 3139 272 272 11 43 chr20 15678503 15678595 -56475287 + L1ME1 LINE L1 5915 6003 -163 661 191 19 19 chr20 15678597 15678759 -56475123 + L1MA10 LINE L1 6171 6332 -2 2039 101 40 3 chr20 15678768 15679066 -56474816 + AluSp SINE Alu 1 309 -4 23 33 0 0 chr20 15679198 15679228 -56474654 + AT_rich Low_complexity Low_complexity 1 30 0 2313 165 64 2 chr20 15680897 15681304 -56472578 + LTR32 LTR ERVL 6 437 -34 1469 249 50 28 chr20 15681305 15681770 -56472112 - L1ME3A LINE L1 -28 6142 5668 599 226 72 32 chr20 15681781 15682002 -56471880 - L1ME3A LINE L1 -765 5381 5152 2610 145 41 10 chr20 15682129 15682544 -56471338 + MSTA LTR MaLR 1 428 0 1269 194 115 3 chr20 15683283 15683571 -56470311 + MER33 DNA MER1_type 1 320 -4 258 81 0 0 chr20 15683670 15683707 -56470175 + (CA)n Simple_repeat Simple_repeat 2 38 0 374 246 18 9 chr20 15684223 15684333 -56469549 - MIR SINE MIR -35 227 117 2199 166 79 20 chr20 15684352 15684755 -56469127 + MSTC LTR MaLR 2 428 0 624 141 0 10 chr20 15685555 15685654 -56468228 + MER4A LTR ERV1 1 98 -566 1807 151 6 22 chr20 15685654 15686005 -56467877 + MER4A LTR ERV1 261 664 0 2246 124 32 24 chr20 15687893 15688263 -56465619 - THE1C LTR MaLR -2 373 1 1709 246 117 22 chr20 15688902 15689377 -56464505 + L1ME3A LINE L1 5535 6076 -94 417 75 194 0 chr20 15689377 15689444 -56464438 + MADE1 DNA Mariner 1 80 0 1709 246 117 22 chr20 15689444 15689549 -56464333 + L1ME3A LINE L1 6076 6170 0 229 358 29 44 chr20 15689631 15689768 -56464114 - L2 LINE L2 -2 3270 3136 406 289 92 29 chr20 15690287 15690460 -56463422 - MIR SINE MIR -44 218 35 185 397 15 0 chr20 15691087 15691155 -56462727 - MIR3 SINE MIR -32 176 108 254 256 216 51 chr20 15691158 15691412 -56462470 - MLT1H LTR MaLR -2 547 252 387 339 29 12 chr20 15691442 15691613 -56462269 - MLT1H LTR MaLR -373 176 3 686 335 27 48 chr20 15692556 15692932 -56460950 + LTR16C LTR ERVL 99 466 -25 224 375 104 10 chr20 15692971 15693280 -56460602 + L2 LINE L2 1906 2243 -1071 860 210 77 5 chr20 15693342 15693537 -56460345 + MER3 DNA MER1_type 1 209 0 316 345 111 19 chr20 15693752 15694018 -56459864 + L1M4 LINE L1 4730 5039 -1107 6504 106 11 8 chr20 15694018 15695177 -56458705 + L1PA13 LINE L1 4999 6161 -2 316 345 111 19 chr20 15695177 15695269 -56458613 + L1M4 LINE L1 5039 5121 -1025 247 267 0 0 chr20 15695331 15695391 -56458491 - L2 LINE L2 -72 3241 3182 448 270 10 0 chr20 15695426 15695526 -56458356 - MER94 DNA DNA -33 101 1 36 0 0 0 chr20 15695836 15695872 -56458010 + AT_rich Low_complexity Low_complexity 1 36 0 572 292 64 58 chr20 15695940 15696036 -56457846 - L1MC4a LINE L1 -302 5819 5725 1675 231 110 79 chr20 15696036 15696643 -56457239 + MLT1E2 LTR MaLR 1 626 0 572 292 64 58 chr20 15696643 15697084 -56456798 - L1MC4a LINE L1 -396 5725 5338 372 210 67 25 chr20 15697712 15697831 -56456051 - L1MC4 LINE L1 -2 8040 7917 2002 142 15 89 chr20 15697963 15698358 -56455524 - MER47A DNA MER2_type 0 366 1 769 240 76 32 chr20 15698367 15698617 -56455265 - L1ME2 LINE L1 -9 6155 5895 768 136 57 0 chr20 15700972 15701112 -56452770 + Charlie5 DNA MER1_type 2471 2618 0 275 236 36 0 chr20 15701126 15701181 -56452701 + MER58 DNA MER1_type 1 57 -158 * 357 224 0 0 chr20 15701175 15701242 -56452640 + MER58 DNA MER1_type 169 235 -2185 722 317 85 17 chr20 15701767 15702177 -56451705 + L2 LINE L2 1372 1809 -1505 3785 124 12 0 chr20 15702177 15702854 -56451028 + L1PB1 LINE L1 5120 5803 -348 195 70 47 23 chr20 15702927 15702970 -56450912 + (TA)n Simple_repeat Simple_repeat 1 44 0 2570 82 10 69 chr20 15702977 15703168 -56450714 + L1PB1 LINE L1 5782 5940 -211 2137 71 7 11 chr20 15703168 15703451 -56450431 + AluY SINE Alu 21 302 -9 2570 82 10 69 chr20 15703451 15703651 -56450231 + L1PB1 LINE L1 5940 6150 -1 1719 292 60 21 chr20 15703664 15704376 -56449506 + L2 LINE L2 1794 2533 -781 248 240 13 197 chr20 15704453 15704686 -56449196 + L2 LINE L2 3032 3221 -92 6213 115 15 8 chr20 15704746 15706561 -56447321 - L1PA13 LINE L1 -11 6152 4328 1406 212 48 15 chr20 15706561 15706891 -56446991 - MER63 DNA MER1_type -36 1024 684 204 286 39 26 chr20 15706891 15706968 -56446914 - MIR SINE MIR -152 110 33 231 205 121 24 chr20 15707033 15707116 -56446766 - MLT1K LTR MaLR -342 246 156 2435 70 7 0 chr20 15707146 15707446 -56446436 + AluSx SINE Alu 1 302 -10 382 303 0 106 chr20 15708417 15708481 -56445401 + MIR SINE MIR 57 126 -136 207 0 0 0 chr20 15708481 15708504 -56445378 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1723 134 3 49 chr20 15708506 15708790 -56445092 - AluSx SINE Alu -31 281 11 382 303 0 106 chr20 15708790 15708940 -56444942 + MIR SINE MIR 127 251 -11 388 268 72 13 chr20 15709239 15709392 -56444490 + L1MC/D LINE L1 4915 5076 -1070 483 279 88 60 chr20 15709627 15710046 -56443836 + L1MC/D LINE L1 5385 5815 -1993 1233 275 49 56 chr20 15710608 15711491 -56442391 - L2 LINE L2 0 3313 2427 186 43 0 0 chr20 15712915 15712938 -56440944 + (T)n Simple_repeat Simple_repeat 1 23 0 277 320 108 26 chr20 15713653 15713847 -56440035 + MIR SINE MIR 1 210 -52 22 0 0 0 chr20 15715436 15715458 -56438424 + AT_rich Low_complexity Low_complexity 1 22 0 2840 64 35 0 chr20 15715564 15715907 -56437975 + THE1A LTR MaLR 1 355 0 3703 50 0 15 chr20 15715914 15716369 -56437513 - LTR7 LTR ERV1 -2 448 1 2532 81 45 13 chr20 15716369 15716750 -56437132 - HERVH LTR ERV1 0 7713 7321 1394 127 18 18 chr20 15716747 15716967 -56436915 - HERVH LTR ERV1 -1894 5819 5600 * 4359 147 3 1 chr20 15716968 15717629 -56436253 - HERVH LTR ERV1 -2564 5149 4488 3214 133 2 6 chr20 15717631 15718135 -56435747 - HERVH LTR ERV1 -3720 3993 3492 985 127 7 0 chr20 15718125 15718275 -56435607 - HERVH LTR ERV1 -4423 3290 3140 * 20835 90 14 20 chr20 15718261 15721272 -56432610 - HERVH LTR ERV1 -4721 2992 1 3647 57 0 15 chr20 15721274 15721729 -56432153 - LTR7 LTR ERV1 -2 448 1 752 286 125 0 chr20 15721734 15721958 -56431924 - LTR16C LTR ERVL 0 491 240 3640 60 7 5 chr20 15722156 15722603 -56431279 - LTR7 LTR ERV1 -2 448 1 201 173 27 40 chr20 15722799 15722874 -56431008 + GA-rich Low_complexity Low_complexity 4 77 0 22 35 0 0 chr20 15723092 15723121 -56430761 + AT_rich Low_complexity Low_complexity 1 29 0 1791 125 0 0 chr20 15723441 15723681 -56430201 - AluSg SINE Alu -68 242 3 475 325 7 0 chr20 15723681 15723835 -56430047 + MIR SINE MIR 99 253 -9 1453 159 51 57 chr20 15724174 15724470 -56429412 - AluJo SINE Alu -13 299 6 769 260 154 55 chr20 15724579 15725302 -56428580 - LTR1 LTR ERV1 0 826 18 184 273 78 52 chr20 15726263 15726340 -56427542 - L2 LINE L2 -1 3312 3234 186 103 0 0 chr20 15726844 15726873 -56427009 + (TC)n Simple_repeat Simple_repeat 2 30 0 296 304 40 92 chr20 15727243 15727493 -56426389 + L2 LINE L2 3032 3268 -4 192 179 0 0 chr20 15727573 15727612 -56426270 + T-rich Low_complexity Low_complexity 1 39 0 2299 114 0 0 chr20 15727634 15727942 -56425940 - AluSq SINE Alu -5 308 1 661 159 0 0 chr20 15728022 15728129 -56425753 - FLAM_C SINE Alu -25 118 12 416 160 13 0 chr20 15729087 15729162 -56424720 - L1PB3 LINE L1 0 6154 6079 372 329 156 22 chr20 15729621 15729986 -56423896 - L1M4 LINE L1 -1386 4760 4347 284 339 8 8 chr20 15730152 15730282 -56423600 - L1M4 LINE L1 -1999 4147 4018 226 209 0 93 chr20 15730357 15730443 -56423439 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 204 158 0 0 chr20 15730448 15730486 -56423396 + (TA)n Simple_repeat Simple_repeat 1 38 0 452 266 77 39 chr20 15730502 15730913 -56422969 - L1M4 LINE L1 -2211 3935 3521 217 352 34 0 chr20 15731691 15731779 -56422103 - MIR SINE MIR -110 152 62 197 319 14 0 chr20 15781931 15782000 -56371882 + MIR SINE MIR 180 249 -13 1634 237 74 9 chr20 15782169 15782616 -56371266 - L1ME3A LINE L1 -35 6135 5660 2325 106 0 0 chr20 15782902 15783203 -56370679 + AluSc SINE Alu 5 305 -4 297 384 81 34 chr20 15783469 15783792 -56370090 - L2 LINE L2 0 3272 2935 226 260 0 0 chr20 15783996 15784046 -56369836 + L1MC4 LINE L1 7630 7679 -363 2027 113 3 48 chr20 15784269 15784579 -56369303 + AluSx SINE Alu 1 296 -16 2289 77 37 0 chr20 15784579 15784877 -56369005 + AluY SINE Alu 1 309 -2 214 308 26 26 chr20 15785108 15785186 -56368696 + MIR SINE MIR 20 97 -111 213 222 185 0 chr20 15785548 15785602 -56368280 + L2 LINE L2 3182 3245 -27 1629 171 29 41 chr20 15786106 15786422 -56367460 + AluJo SINE Alu 1 312 0 194 329 66 0 chr20 15787413 15787489 -56366393 + MIR SINE MIR 180 260 -2 339 184 43 57 chr20 15787676 15787817 -56366065 - L1MC4 LINE L1 -1 8041 7903 304 271 56 0 chr20 15787849 15787956 -56365926 - L1MC4 LINE L1 -124 7918 7806 466 197 123 8 chr20 15787991 15788113 -56365769 - MER58C DNA MER1_type 0 215 80 568 291 82 28 chr20 15788207 15788561 -56365321 - L1MC4 LINE L1 -288 7754 7382 188 33 0 33 chr20 15788583 15788613 -56365269 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 383 304 121 34 chr20 15789121 15789328 -56364554 - MIR SINE MIR -17 245 21 2771 182 48 42 chr20 15789398 15790090 -56363792 - L1ME2 LINE L1 -19 6145 5450 189 389 57 64 chr20 15790145 15790302 -56363580 + L2 LINE L2 3101 3256 -16 230 261 15 31 chr20 15790485 15790550 -56363332 - MER5B DNA MER1_type -20 158 95 245 330 20 10 chr20 15790694 15790794 -56363088 - MER5B DNA MER1_type -77 101 1 216 253 11 46 chr20 15791635 15791722 -56362160 + GA-rich Low_complexity Low_complexity 2 85 0 195 204 0 0 chr20 15791734 15791778 -56362104 + (TG)n Simple_repeat Simple_repeat 1 44 0 498 279 25 13 chr20 15791832 15791990 -56361892 - MIR3 SINE MIR -6 202 43 247 247 95 79 chr20 15794281 15794471 -56359411 - MIR SINE MIR -4 258 66 536 191 55 109 chr20 15794477 15794697 -56359185 - MIR SINE MIR -24 238 31 304 375 59 0 chr20 15795489 15795625 -56358257 + MIR3 SINE MIR 65 208 0 1112 194 49 0 chr20 15796452 15796699 -56357183 - MER58B DNA MER1_type -4 337 79 252 249 85 67 chr20 15796794 15796959 -56356923 + MIR3 SINE MIR 34 201 -7 21 0 0 0 chr20 15797584 15797605 -56356277 + AT_rich Low_complexity Low_complexity 1 21 0 844 225 70 12 chr20 15797823 15798067 -56355815 + LTR56 LTR ERV1 188 445 0 270 295 128 45 chr20 15798165 15798524 -56355358 - L1ME LINE L1 -298 5823 5435 2155 109 0 14 chr20 15798609 15798903 -56354979 - AluSc SINE Alu -19 290 1 325 288 69 25 chr20 15798939 15799099 -56354783 - L1ME LINE L1 -820 5326 5160 189 147 0 0 chr20 15799579 15799613 -56354269 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 198 0 0 0 chr20 15799626 15799648 -56354234 + (TGG)n Simple_repeat Simple_repeat 1 22 0 282 290 0 21 chr20 15799900 15800045 -56353837 - L1ME LINE L1 -1549 4597 4456 249 308 62 14 chr20 15800553 15800761 -56353121 - L1ME LINE L1 -2036 4110 3893 73 79 0 0 chr20 15800884 15801048 -56352834 + AT_rich Low_complexity Low_complexity 1 164 0 827 203 11 28 chr20 15801172 15801349 -56352533 + AluJo SINE Alu 121 294 -18 29 84 0 0 chr20 15801823 15801894 -56351988 + AT_rich Low_complexity Low_complexity 1 71 0 374 313 45 45 chr20 15804240 15804419 -56349463 - L2 LINE L2 -92 3221 3043 1874 194 34 17 chr20 15805738 15806208 -56347674 + L1MA4 LINE L1 5815 6292 -8 3067 126 16 16 chr20 15807509 15808018 -56345864 - MER75 DNA T2_type 0 514 6 235 219 252 8 chr20 15808275 15808394 -56345488 + L2 LINE L2 2701 2848 -466 2215 119 0 45 chr20 15809431 15809784 -56344098 + MER1B DNA MER1_type 1 337 0 429 70 0 0 chr20 15812026 15812083 -56341799 + (TA)n Simple_repeat Simple_repeat 2 58 0 254 182 0 61 chr20 15812324 15812390 -56341492 + GA-rich Low_complexity Low_complexity 3 64 0 1918 146 3 0 chr20 15812624 15812953 -56340929 + L1MA9 LINE L1 4721 5050 -1096 1444 130 17 38 chr20 15812942 15813234 -56340648 + L1MA9 LINE L1 5894 6179 -133 * 4941 153 51 15 chr20 15813233 15813514 -56340368 + L1MA9 LINE L1 5032 5301 -1011 243 0 0 0 chr20 15813514 15813541 -56340341 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4941 153 51 15 chr20 15813541 15814476 -56339406 + L1MA9 LINE L1 5301 6279 -33 27 0 0 0 chr20 15814560 15814587 -56339295 + AT_rich Low_complexity Low_complexity 1 27 0 398 176 0 0 chr20 15814649 15814723 -56339159 + MER116 DNA Mariner 2 75 -5 526 298 106 49 chr20 15815161 15815567 -56338315 + L1MB8 LINE L1 4231 4659 -1487 1805 123 60 23 chr20 15815664 15815965 -56337917 + AluSx SINE Alu 1 312 0 1246 126 11 0 chr20 15816034 15816216 -56337666 + AluSg/x SINE Alu 129 312 0 1865 134 0 33 chr20 15816284 15816624 -56337258 + AluSx SINE Alu 4 312 0 338 297 68 56 chr20 15816974 15817311 -56336571 + L1MB8 LINE L1 5313 5653 -468 313 269 71 43 chr20 15817389 15817530 -56336352 + L1MB8 LINE L1 5776 5920 -258 255 315 0 34 chr20 15817799 15817945 -56335937 - MARNA DNA Mariner -63 523 383 1497 277 93 19 chr20 15818094 15818727 -56335155 - L2 LINE L2 -310 3003 2325 411 239 161 0 chr20 15818736 15818891 -56334991 - L2 LINE L2 -1745 1569 1390 2242 137 133 74 chr20 15818891 15819084 -56334798 + LTR64 LTR ERVK 1 181 -377 3968 149 30 1 chr20 15819084 15819399 -56334483 + L1PB4 LINE L1 5459 5764 -392 213 39 0 0 chr20 15819399 15819425 -56334457 + (CA)n Simple_repeat Simple_repeat 1 26 0 3968 149 30 1 chr20 15819425 15819788 -56334094 + L1PB4 LINE L1 5764 6156 0 2242 137 133 74 chr20 15819788 15819822 -56334060 + LTR64 LTR ERVK 181 212 -346 360 0 0 0 chr20 15819822 15819862 -56334020 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 2242 137 133 74 chr20 15819862 15820160 -56333722 + LTR64 LTR ERVK 212 558 0 637 292 20 0 chr20 15820160 15820362 -56333520 - L2 LINE L2 -1921 1393 1188 229 267 74 91 chr20 15820386 15820562 -56333320 - L2 LINE L2 -2282 1032 860 188 138 0 0 chr20 15820574 15820603 -56333279 + MER5B DNA MER1_type 150 178 0 309 235 15 0 chr20 15820815 15820883 -56332999 - MER5A DNA MER1_type 0 189 121 1139 228 47 16 chr20 15821096 15821416 -56332466 + MER87 LTR ERV1 211 540 -1 546 219 174 13 chr20 15821423 15821578 -56332304 + MER5A DNA MER1_type 10 189 0 561 256 5 111 chr20 15821586 15821785 -56332097 + MER5B DNA MER1_type 1 178 0 2240 121 0 0 chr20 15823199 15823497 -56330385 + AluSg SINE Alu 1 298 -12 1686 150 22 8 chr20 15823522 15823789 -56330093 + AluSx SINE Alu 34 304 -8 630 243 107 83 chr20 15824165 15824539 -56329343 + LTR16A LTR ERVL 55 437 -13 790 336 87 47 chr20 15825335 15826243 -56327639 + L2 LINE L2 2120 3073 -199 12353 85 8 21 chr20 15826252 15828166 -56325716 - L1P3 LINE L1 -4563 1898 2 7768 163 54 6 chr20 15828171 15830597 -56323285 - L1PBa LINE L1 -3016 3846 1300 389 255 21 21 chr20 15831459 15831600 -56322282 + L1MC4 LINE L1 7171 7311 -731 435 249 35 30 chr20 15831709 15831906 -56321976 + L1MC5 LINE L1 7303 7500 -461 983 81 6 25 chr20 15832033 15832194 -56321688 - L1P LINE L1 -3637 2509 2352 360 300 97 4 chr20 15832254 15832481 -56321401 + L1MC4 LINE L1 7795 8042 0 291 299 11 11 chr20 15833387 15833474 -56320408 - L2 LINE L2 -18 3254 3168 369 0 0 0 chr20 15835202 15835243 -56318639 + (TG)n Simple_repeat Simple_repeat 1 41 0 313 305 165 12 chr20 15835425 15835589 -56318293 + MIR SINE MIR 74 262 0 2402 93 0 7 chr20 15835837 15836147 -56317735 + AluSx SINE Alu 1 308 -4 180 350 115 18 chr20 15836385 15836671 -56317211 - L2 LINE L2 -1481 1833 1520 304 263 0 0 chr20 15837152 15837228 -56316654 - MLT2E LTR ERVL 0 628 553 6198 232 68 30 chr20 15837288 15839592 -56314290 + L1M4b LINE L1 21 2560 -4578 2123 90 11 7 chr20 15839592 15839871 -56314011 + AluSc SINE Alu 12 291 -18 6198 232 68 30 chr20 15839871 15840004 -56313878 + L1M4b LINE L1 2560 2686 -4452 324 120 0 0 chr20 15840156 15840206 -56313676 + (CA)n Simple_repeat Simple_repeat 2 51 0 3889 264 65 12 chr20 15840274 15842107 -56311775 + L1M4b LINE L1 2623 4519 -2438 22 0 0 0 chr20 15842172 15842194 -56311688 + AT_rich Low_complexity Low_complexity 1 22 0 354 299 21 21 chr20 15842206 15842350 -56311532 + MLT1I LTR MaLR 68 211 -198 246 212 0 61 chr20 15842451 15842517 -56311365 + MLT1J2 LTR MaLR 389 450 0 866 299 142 22 chr20 15842834 15843370 -56310512 + MLT1L LTR MaLR 5 604 -11 2416 142 32 18 chr20 15843553 15843990 -56309892 - Tigger2 DNA MER2_type -3 2715 2273 346 176 0 15 chr20 15843982 15844050 -56309832 - Tigger2 DNA MER2_type -2651 67 1 * 234 259 0 0 chr20 15845306 15845360 -56308522 + L2 LINE L2 2593 2646 -668 298 213 38 0 chr20 15845583 15845663 -56308219 - L1M3b LINE L1 -4516 1765 1683 301 212 71 0 chr20 15845668 15845753 -56308129 + L1M3b LINE L1 1551 1641 -4640 329 287 53 0 chr20 15845863 15845957 -56307925 + L2 LINE L2 3173 3271 -1 1171 258 97 32 chr20 15846594 15847005 -56306877 + MLT1J1 LTR MaLR 1 438 -8 185 344 16 0 chr20 15848288 15848349 -56305533 - MIR SINE MIR -141 121 60 455 250 9 0 chr20 15848747 15848855 -56305027 - L2 LINE L2 0 3272 3164 866 210 10 15 chr20 15848862 15849062 -56304820 - MER3 DNA MER1_type 0 209 11 826 226 65 0 chr20 15849072 15849258 -56304624 + MER58A DNA MER1_type 27 224 0 260 391 77 10 chr20 15849325 15849532 -56304350 - L2 LINE L2 -180 3092 2872 * 490 242 25 33 chr20 15849529 15849649 -56304233 + L2 LINE L2 3194 3312 -1 187 339 120 10 chr20 15849635 15849827 -56304055 - L2 LINE L2 -445 2869 2657 * 225 246 15 31 chr20 15851284 15851349 -56302533 + MIR SINE MIR 81 144 -64 372 43 0 0 chr20 15852555 15852601 -56301281 + (TG)n Simple_repeat Simple_repeat 1 46 0 203 246 159 0 chr20 15852783 15852852 -56301030 + MIR SINE MIR 62 141 -67 1413 240 23 70 chr20 15853019 15853532 -56300350 - LTR16C LTR ERVL 0 491 3 416 66 0 0 chr20 15853684 15853745 -56300137 + L1P LINE L1 5325 5385 -780 782 228 56 0 chr20 15853854 15854034 -56299848 - MIR SINE MIR -33 229 40 380 163 0 0 chr20 15854844 15854918 -56298964 + L1ME2 LINE L1 6090 6166 0 198 103 0 0 chr20 15855015 15855044 -56298838 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 513 277 19 19 chr20 15855213 15855372 -56298510 + MIR SINE MIR 64 222 -40 826 227 45 119 chr20 15855952 15856689 -56297193 - L2 LINE L2 -1 3312 2640 372 221 54 5 chr20 15856692 15856800 -56297082 + MLT1G LTR MaLR 3 109 -446 * 809 261 28 21 chr20 15856795 15857086 -56296796 + MLT1G LTR MaLR 298 590 0 1950 262 18 77 chr20 15857086 15857574 -56296308 - L2 LINE L2 -671 2643 2215 2342 176 23 59 chr20 15857574 15858098 -56295784 - LTR10B LTR ERV1 0 505 1 1950 262 18 77 chr20 15858098 15858379 -56295503 - L2 LINE L2 -1099 2215 1919 215 294 0 44 chr20 15858406 15858474 -56295408 - L2 LINE L2 -19 3294 3230 478 298 216 10 chr20 15858501 15858709 -56295173 - MIR SINE MIR -1 261 11 25 31 0 0 chr20 15858849 15858881 -56295001 + AT_rich Low_complexity Low_complexity 1 32 0 1389 207 0 58 chr20 15858911 15859206 -56294676 - AluJo SINE Alu -30 282 5 271 258 110 49 chr20 15860080 15860243 -56293639 + Charlie8 DNA MER1_type 2 174 -2243 1055 291 112 13 chr20 15861208 15861703 -56292179 - MLT1G1 LTR MaLR -3 592 5 1439 110 55 5 chr20 15861705 15861924 -56291958 + MER30 DNA MER1_type 1 230 0 604 252 126 18 chr20 15862402 15862624 -56291258 + MIR SINE MIR 16 261 -1 532 292 99 26 chr20 15862851 15863084 -56290798 + MIR SINE MIR 11 260 -2 214 136 17 51 chr20 15863223 15863282 -56290600 + CT-rich Low_complexity Low_complexity 3 59 0 513 324 61 27 chr20 15863642 15864083 -56289799 - L1M4 LINE L1 -1346 4800 4345 1111 285 91 0 chr20 15864496 15864882 -56289000 + LTR16C LTR ERVL 71 491 0 254 273 140 28 chr20 15864993 15865136 -56288746 + L2 LINE L2 2933 3091 -181 720 282 190 35 chr20 15865159 15865674 -56288208 + MLT1G1 LTR MaLR 1 595 0 403 252 161 39 chr20 15866614 15866844 -56287038 + MIR SINE MIR 5 262 0 984 150 67 0 chr20 15870698 15870891 -56282991 + L1MB3 LINE L1 5971 6176 -7 311 211 0 0 chr20 15871046 15871103 -56282779 + MIR SINE MIR 85 141 -121 197 291 10 0 chr20 15872012 15872115 -56281767 + CT-rich Low_complexity Low_complexity 1 104 0 306 273 18 43 chr20 15873043 15873163 -56280719 - MIR SINE MIR -81 127 10 1036 291 71 8 chr20 15873798 15874176 -56279706 + LTR16C LTR ERVL 90 491 0 1860 191 41 59 chr20 15874625 15875053 -56278829 - MLT1D LTR MaLR -2 503 84 1541 148 7 10 chr20 15875053 15875343 -56278539 - L1MA8 LINE L1 -6 6285 5997 1860 191 41 59 chr20 15875343 15875426 -56278456 - MLT1D LTR MaLR -421 84 1 2054 264 31 17 chr20 15875610 15876173 -56277709 - L1ME3A LINE L1 -13 6157 5581 1802 143 60 30 chr20 15876173 15876537 -56277345 + THE1C LTR MaLR 1 375 0 2054 264 31 17 chr20 15876537 15876674 -56277208 - L1ME3A LINE L1 -589 5581 5447 329 203 14 0 chr20 15876702 15876776 -56277106 - L1ME2 LINE L1 -10 6154 6080 761 246 33 24 chr20 15877936 15878147 -56275735 - MLT1J2 LTR MaLR -237 213 1 22 0 0 0 chr20 15879326 15879348 -56274534 + AT_rich Low_complexity Low_complexity 1 22 0 2473 77 3 0 chr20 15879469 15879779 -56274103 + AluY SINE Alu 1 311 0 279 202 45 103 chr20 15880110 15880437 -56273445 + LTR37B LTR ERV1 90 400 -68 562 201 49 83 chr20 15880440 15880704 -56273178 + LTR37B LTR ERV1 210 464 -4 236 289 60 78 chr20 15880765 15880983 -56272899 - MIR SINE MIR -30 232 19 1650 172 18 7 chr20 15881122 15881407 -56272475 - AluJb SINE Alu -24 288 1 225 111 0 48 chr20 15881438 15881501 -56272381 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 1026 220 83 8 chr20 15882132 15882373 -56271509 - L1ME3A LINE L1 -104 6066 5808 381 43 0 0 chr20 15882442 15882489 -56271393 + (CA)n Simple_repeat Simple_repeat 2 48 0 4407 171 32 35 chr20 15882979 15884067 -56269815 - L1MB8 LINE L1 -1 6177 5099 27 0 0 0 chr20 15885407 15885434 -56268448 + AT_rich Low_complexity Low_complexity 1 27 0 421 215 61 61 chr20 15886959 15887122 -56266760 - LTR45B LTR ERV1 -15 474 312 1368 104 0 0 chr20 15887338 15887520 -56266362 - AluY SINE Alu -1 310 129 2775 253 66 21 chr20 15888564 15889543 -56264339 + L1MB8 LINE L1 3786 4808 -1338 2674 238 52 18 chr20 15889610 15890337 -56263545 + L1MB8 LINE L1 5423 6174 -4 304 218 11 45 chr20 15890491 15890670 -56263212 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 21 36 0 0 chr20 15891856 15891884 -56261998 + AT_rich Low_complexity Low_complexity 1 28 0 1962 229 32 9 chr20 15892391 15892828 -56261054 + MER90 LTR ERV1 3 449 -165 1494 254 8 17 chr20 15892837 15893196 -56260686 + MLT1A1 LTR MaLR 10 365 0 641 200 69 7 chr20 15893199 15893344 -56260538 + MER90 LTR ERV1 448 601 -13 * 1103 158 47 0 chr20 15893341 15893531 -56260351 + MER66A LTR ERV1 278 476 -2 485 253 95 46 chr20 15893614 15893855 -56260027 - MIR SINE MIR 0 262 10 189 266 53 44 chr20 15894865 15894978 -56258904 - MIR SINE MIR -65 143 30 4248 110 28 0 chr20 15895005 15895569 -56258313 - LTR19B LTR ERV1 0 580 1 629 306 53 36 chr20 15895806 15896107 -56257775 + MLT1L LTR MaLR 88 393 -222 276 270 56 11 chr20 15897147 15897236 -56256646 - MIR SINE MIR -50 212 120 492 316 93 9 chr20 15897977 15898192 -56255690 - MIR SINE MIR -10 252 20 2329 174 39 0 chr20 15898393 15898800 -56255082 - MSTA LTR MaLR 0 428 6 3826 147 10 2 chr20 15898805 15899390 -56254492 - MSTA-int LTR MaLR 0 1651 1062 3471 156 11 0 chr20 15899412 15899977 -56253905 - MSTA-int LTR MaLR -1080 571 1 2622 168 26 0 chr20 15899977 15900393 -56253489 - MSTA LTR MaLR 0 428 2 1184 209 63 53 chr20 15902261 15902639 -56251243 - MER66A LTR ERV1 -52 426 45 777 171 44 13 chr20 15903183 15903341 -56250541 + L1ME3A LINE L1 6008 6170 0 212 0 0 35 chr20 15903385 15903414 -56250468 + (CA)n Simple_repeat Simple_repeat 2 29 0 714 288 80 60 chr20 15903984 15904550 -56249332 - MER21B LTR ERV1 -149 714 98 379 265 23 53 chr20 15904527 15904659 -56249223 - MER77 LTR ERV1 -412 193 66 * 938 274 97 42 chr20 15905027 15905480 -56248402 + LTR16C LTR ERVL 4 481 -10 369 0 0 0 chr20 15905660 15905701 -56248181 + (TG)n Simple_repeat Simple_repeat 2 42 0 2069 105 0 14 chr20 15906077 15906388 -56247494 + AluSx SINE Alu 1 307 0 1148 196 94 149 chr20 15908121 15908750 -56245132 - LTR49 LTR ERV1 0 595 2 366 245 38 49 chr20 15908857 15909022 -56244860 + L1MC/D LINE L1 5443 5610 -578 1158 99 0 0 chr20 15909026 15909178 -56244704 + AluSp/q SINE Alu 162 313 0 325 207 37 0 chr20 15909212 15909294 -56244588 + MIR SINE MIR 124 208 -54 22 0 0 0 chr20 15909457 15909479 -56244403 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 15910226 15910250 -56243632 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 15910671 15910701 -56243181 + AT_rich Low_complexity Low_complexity 1 30 0 1791 203 22 75 chr20 15911193 15911646 -56242236 - LTR65 LTR ERV1 -2 667 239 1344 184 24 12 chr20 15911651 15911906 -56241976 + MLT1E2 LTR MaLR 312 569 -57 1313 161 28 4 chr20 15911944 15912192 -56241690 - LTR65 LTR ERV1 -415 254 1 537 273 29 35 chr20 15912219 15912391 -56241491 - MIR SINE MIR -63 199 29 539 303 80 11 chr20 15912660 15912848 -56241034 - MIR SINE MIR -57 205 5 601 343 101 32 chr20 15914004 15914511 -56239371 - LTR67 LTR ERVL -14 543 2 392 228 13 162 chr20 15914704 15914764 -56239118 - MIR SINE MIR -13 249 182 1986 113 3 17 chr20 15914764 15915090 -56238792 - AluSg SINE Alu 0 310 1 392 228 13 162 chr20 15915090 15915307 -56238575 - MIR SINE MIR -80 182 14 2226 187 83 29 chr20 15915772 15915817 -56238065 - MLT2B1 LTR ERVL 0 520 479 6764 150 51 21 chr20 15915817 15916124 -56237758 - Tigger3b DNA MER2_type -1797 1231 935 2387 78 3 19 chr20 15916124 15916433 -56237449 + AluSp SINE Alu 1 304 -9 6764 150 51 21 chr20 15916433 15916742 -56237140 - Tigger3b DNA MER2_type -2093 935 637 1825 135 4 0 chr20 15916742 15917021 -56236861 - AluSx SINE Alu 0 314 35 6764 150 51 21 chr20 15917021 15917596 -56236286 - Tigger3b DNA MER2_type -2391 637 2 2226 187 83 29 chr20 15917596 15918041 -56235841 - MLT2B1 LTR ERVL -41 479 3 3400 144 29 18 chr20 15918694 15919251 -56234631 + L1PB4 LINE L1 5583 6145 -11 225 0 48 48 chr20 15919251 15919293 -56234589 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 1752 151 20 17 chr20 15919489 15919781 -56234101 - AluJo SINE Alu -19 293 1 808 178 0 22 chr20 15920154 15920289 -56233593 + FLAM_C SINE Alu 1 132 -1 400 238 33 25 chr20 15921274 15921396 -56232486 - L2 LINE L2 0 3313 3191 5602 147 21 32 chr20 15921750 15921787 -56232095 + L1MA9 LINE L1 5298 5334 -978 2149 113 3 0 chr20 15921787 15922078 -56231804 + AluSx SINE Alu 1 292 -20 5602 147 21 32 chr20 15922078 15923065 -56230817 + L1MA9 LINE L1 5334 6311 -1 196 143 36 0 chr20 15923067 15923123 -56230759 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 1059 242 141 44 chr20 15923128 15923643 -56230239 + MLT1F LTR MaLR 40 542 0 462 294 103 33 chr20 15923730 15923914 -56229968 - MIR SINE MIR 0 262 66 239 282 45 64 chr20 15924190 15924300 -56229582 + L2 LINE L2 3188 3295 -18 1635 127 0 26 chr20 15924373 15924641 -56229241 + Tigger7 DNA MER2_type 2225 2485 -6 248 238 79 0 chr20 15924662 15924725 -56229157 + L2 LINE L2 3201 3268 -4 334 225 132 31 chr20 15925211 15925340 -56228542 - MIR3 SINE MIR -35 173 32 1372 217 96 28 chr20 15926188 15926575 -56227307 - LTR16C LTR ERVL -8 483 71 1945 185 112 28 chr20 15926620 15927084 -56226798 - MLT1D LTR MaLR -2 503 1 245 253 83 41 chr20 15928516 15928653 -56225229 - MIR3 SINE MIR -11 197 48 438 272 52 29 chr20 15929146 15929319 -56224563 + L2 LINE L2 3096 3272 0 212 218 51 39 chr20 15930162 15930240 -56223642 + MIR3 SINE MIR 3 81 -127 325 254 69 34 chr20 15930338 15930597 -56223285 + MLT1H LTR MaLR 98 527 -22 2811 73 3 0 chr20 15930604 15930958 -56222924 - THE1A LTR MaLR 0 355 1 2797 204 99 21 chr20 15931032 15931904 -56221978 - L1ME2 LINE L1 -11 6948 6009 1017 270 58 40 chr20 15931905 15932847 -56221035 - L1ME2 LINE L1 -3603 3338 2416 267 224 68 50 chr20 15932863 15933024 -56220858 - L1ME2 LINE L1 -6178 245 82 1957 127 21 3 chr20 15933091 15933404 -56220478 - AluSx SINE Alu 0 312 1 200 333 0 0 chr20 15934053 15934116 -56219766 + L2 LINE L2 3209 3271 -1 283 308 94 39 chr20 15934384 15934618 -56219264 + LTR16C LTR ERVL 193 439 -52 1425 207 96 6 chr20 15934674 15935017 -56218865 + MLT1F1 LTR MaLR 194 567 0 519 354 42 0 chr20 15935124 15935361 -56218521 + MIR SINE MIR 16 262 0 3048 102 22 2 chr20 15936841 15937302 -56216580 - L1MA1 LINE L1 0 6302 5833 396 258 75 8 chr20 15938306 15938426 -56215456 - MIR SINE MIR -12 250 123 478 341 24 6 chr20 15938568 15938738 -56215144 + MIR SINE MIR 26 198 -64 188 135 27 0 chr20 15939774 15939811 -56214071 + CT-rich Low_complexity Low_complexity 2 39 0 274 319 80 55 chr20 15940745 15940908 -56212974 - MIR SINE MIR -7 255 89 213 250 204 11 chr20 15940927 15941015 -56212867 + MIR3 SINE MIR 54 158 -50 180 97 0 0 chr20 15941280 15941311 -56212571 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 213 384 20 10 chr20 15942459 15942558 -56211324 + L2 LINE L2 1495 1594 -1720 859 354 65 23 chr20 15942600 15943264 -56210618 + L2 LINE L2 1938 2629 -685 309 321 137 0 chr20 15944123 15944291 -56209591 - L3 LINE CR1 -343 1234 1044 680 35 11 0 chr20 15944353 15944440 -56209442 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 369 261 22 11 chr20 15944694 15944786 -56209096 - L2 LINE L2 -12 3301 3209 21 36 0 0 chr20 15945310 15945338 -56208544 + AT_rich Low_complexity Low_complexity 1 28 0 229 200 0 0 chr20 15947082 15947122 -56206760 - L2 LINE L2 -8 3305 3266 182 105 26 0 chr20 15947256 15947294 -56206588 + CT-rich Low_complexity Low_complexity 2 40 0 303 326 0 0 chr20 15947303 15947392 -56206490 - L1MC4 LINE L1 -1340 6702 6614 237 211 0 0 chr20 15947394 15947446 -56206436 + (TA)n Simple_repeat Simple_repeat 2 53 0 204 40 0 0 chr20 15947446 15947471 -56206411 + (CA)n Simple_repeat Simple_repeat 2 26 0 571 277 6 24 chr20 15948278 15948444 -56205438 + MLT2F LTR ERVL 371 533 -130 378 0 0 0 chr20 15948452 15948494 -56205388 + (CA)n Simple_repeat Simple_repeat 2 43 0 467 199 397 6 chr20 15949620 15949776 -56204106 - MIR SINE MIR -23 239 23 231 224 0 0 chr20 15950045 15950094 -56203788 + L2 LINE L2 3263 3311 -2 397 324 7 14 chr20 15951092 15951237 -56202645 + MIR3 SINE MIR 40 183 -25 22 0 0 0 chr20 15952457 15952479 -56201403 + AT_rich Low_complexity Low_complexity 1 22 0 1982 284 70 15 chr20 15953571 15954414 -56199468 - L1ME3A LINE L1 -5 6165 5277 366 273 0 8 chr20 15954416 15954544 -56199338 - L1ME3A LINE L1 -896 5250 5124 22 35 0 0 chr20 15955079 15955108 -56198774 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr20 15955142 15955170 -56198712 + AT_rich Low_complexity Low_complexity 1 28 0 542 347 66 20 chr20 15956361 15956770 -56197112 + LTR16B LTR ERVL 35 462 -2 1164 332 49 26 chr20 15958867 15959656 -56194226 - L2 LINE L2 -2 3311 2494 30 69 0 0 chr20 15960165 15960223 -56193659 + AT_rich Low_complexity Low_complexity 1 58 0 242 328 76 8 chr20 15960394 15960525 -56193357 + MIR SINE MIR 53 192 -70 822 204 26 87 chr20 15960685 15960916 -56192966 + MER20 DNA MER1_type 3 219 0 265 228 120 43 chr20 15961122 15961214 -56192668 + MLT1I LTR MaLR 73 171 -238 275 223 89 80 chr20 15961362 15961474 -56192408 + MLT1H LTR MaLR 421 533 -16 296 94 19 0 chr20 15961898 15961951 -56191931 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 2287 81 0 0 chr20 15962585 15962900 -56190982 + AluY SINE Alu 1 315 0 3389 210 50 19 chr20 15962982 15963578 -56190304 - L1MD1 LINE L1 -141 6495 5919 4979 93 100 13 chr20 15963578 15964338 -56189544 - LTR12 LTR ERV1 0 826 1 3389 210 50 19 chr20 15964338 15964873 -56189009 - L1MD1 LINE L1 -717 5919 5336 6791 176 10 1 chr20 15964911 15966993 -56186889 - L1PA13 LINE L1 0 6163 4055 1574 247 42 27 chr20 15967000 15967665 -56186217 - L1MD1 LINE L1 -1198 5342 4668 225 284 29 48 chr20 15967671 15967879 -56186003 - L1MD1 LINE L1 -2542 3998 3795 1842 225 35 67 chr20 15967946 15968510 -56185372 + MLT2B3 LTR ERVL 1 546 -8 2067 254 87 13 chr20 15968512 15969535 -56184347 - L1MD1 LINE L1 -2897 3643 2516 1178 241 103 0 chr20 15969526 15969874 -56184008 - L1MD1 LINE L1 -6129 411 28 * 364 330 126 5 chr20 15969892 15970098 -56183784 + MIR SINE MIR 31 261 -1 235 319 0 0 chr20 15970099 15970171 -56183711 + (TTA)n Simple_repeat Simple_repeat 2 73 0 285 303 0 0 chr20 15971318 15971384 -56182498 + MIR SINE MIR 123 188 -74 276 193 42 32 chr20 15972755 15972850 -56181032 + MIR SINE MIR 86 183 -63 267 304 14 81 chr20 15973328 15973476 -56180406 - MIR SINE MIR -14 248 111 768 272 86 13 chr20 15974734 15974966 -56178916 - MIR SINE MIR -10 252 4 305 301 0 53 chr20 15975008 15975121 -56178761 + MIR SINE MIR 128 234 -28 240 35 0 0 chr20 15975186 15975215 -56178667 + (ATG)n Simple_repeat Simple_repeat 1 29 0 223 341 119 8 chr20 15977461 15977587 -56176295 + MIR SINE MIR 21 160 -102 21 36 0 0 chr20 15977624 15977652 -56176230 + AT_rich Low_complexity Low_complexity 1 28 0 232 196 0 22 chr20 15977653 15977699 -56176183 - MIR SINE MIR -1 261 217 352 325 63 16 chr20 15977709 15977900 -56175982 - L1ME3A LINE L1 -1 6169 5970 1104 132 13 0 chr20 15977974 15978133 -56175749 - AluSg/x SINE Alu -17 295 135 441 117 0 0 chr20 15978133 15978193 -56175689 - AluSq SINE Alu -111 202 143 1460 122 0 24 chr20 15978193 15978406 -56175476 - AluSq SINE Alu -103 210 3 1317 283 50 25 chr20 15978407 15979256 -56174626 - L1ME3A LINE L1 -213 5949 5083 261 0 0 0 chr20 15979567 15979596 -56174286 + (CA)n Simple_repeat Simple_repeat 1 29 0 361 321 105 12 chr20 15979928 15980090 -56173792 - MIR3 SINE MIR -11 197 21 22 70 0 0 chr20 15980259 15980302 -56173580 + AT_rich Low_complexity Low_complexity 1 43 0 2014 229 35 43 chr20 15980318 15980946 -56172936 + L1ME3A LINE L1 5318 5940 -230 1148 216 4 13 chr20 15980952 15981183 -56172699 - MER8 DNA MER2_type 0 239 11 394 202 92 140 chr20 15981193 15981421 -56172461 + L1ME3A LINE L1 5954 6170 0 304 258 101 25 chr20 15982081 15982240 -56171642 - MIR SINE MIR -72 190 20 285 196 22 11 chr20 15982963 15983055 -56170827 + (CA)n Simple_repeat Simple_repeat 1 93 0 401 286 9 0 chr20 15983084 15983189 -56170693 + MIR SINE MIR 34 139 -123 342 324 58 10 chr20 15983339 15983546 -56170336 + L3 LINE CR1 1308 1524 -53 379 339 119 0 chr20 15983943 15984111 -56169771 + LTR16C LTR ERVL 65 252 -239 354 289 16 8 chr20 15984112 15984233 -56169649 + LTR16C LTR ERVL 367 488 -3 237 245 75 43 chr20 15984382 15984476 -56169406 + L2 LINE L2 3163 3259 -13 1012 275 33 15 chr20 15984627 15985023 -56168859 - L1ME3A LINE L1 -189 5981 5579 1331 209 74 3 chr20 15985071 15985187 -56168695 + AluJo SINE Alu 1 107 -205 513 28 56 28 chr20 15985187 15985294 -56168588 + (TA)n Simple_repeat Simple_repeat 2 111 0 1331 209 74 3 chr20 15985294 15985460 -56168422 + AluJo SINE Alu 107 303 -9 30 45 0 0 chr20 15985469 15985513 -56168369 + AT_rich Low_complexity Low_complexity 1 44 0 276 317 21 49 chr20 15985692 15985834 -56168048 - LTR16C LTR ERVL -281 210 73 24 0 0 0 chr20 15986425 15986449 -56167433 + AT_rich Low_complexity Low_complexity 1 24 0 246 62 0 0 chr20 15987297 15987329 -56166553 + (CA)n Simple_repeat Simple_repeat 1 32 0 816 200 0 0 chr20 15987330 15987475 -56166407 + MER82 DNA MER2_type 2 146 -507 1870 237 11 26 chr20 15987909 15988364 -56165518 + MER82 DNA MER2_type 200 647 -6 339 325 45 13 chr20 15988666 15988823 -56165059 + MIR SINE MIR 51 212 -50 325 280 110 0 chr20 15988992 15989092 -56164790 + MLT1I LTR MaLR 232 342 -67 196 250 136 45 chr20 15989510 15989598 -56164284 - L2 LINE L2 -300 2972 2877 532 273 91 6 chr20 15990603 15990779 -56163103 + MIR SINE MIR 72 262 0 405 228 73 49 chr20 15990775 15990898 -56162984 - MIR SINE MIR -64 198 73 * 358 323 115 38 chr20 15991084 15991449 -56162433 - L1ME2 LINE L1 -259 5905 5510 2573 47 0 0 chr20 15991701 15991998 -56161884 - AluY SINE Alu -8 303 7 230 176 33 22 chr20 15993092 15993183 -56160699 + (CATA)n Simple_repeat Simple_repeat 3 94 0 314 168 9 28 chr20 15993230 15993337 -56160545 + (CA)n Simple_repeat Simple_repeat 2 106 0 326 212 0 12 chr20 15994377 15994462 -56159420 + CT-rich Low_complexity Low_complexity 2 85 0 404 341 145 21 chr20 15995193 15995677 -56158205 + MLT1K LTR MaLR 3 546 -42 317 327 176 7 chr20 15995898 15996051 -56157831 - MER5A DNA MER1_type 0 189 11 376 230 73 79 chr20 15998374 15998552 -56155330 + MIR3 SINE MIR 32 208 0 * 769 291 90 67 chr20 15998541 15999326 -56154556 + L2 LINE L2 2471 3293 -20 1817 82 19 11 chr20 15999332 15999599 -56154283 + L1PA8A LINE L1 5835 6103 -28 830 269 61 19 chr20 15999981 16000293 -56153589 + LTR16C LTR ERVL 161 485 -6 593 284 87 29 chr20 16000482 16000690 -56153192 + MIR SINE MIR 22 241 -21 4760 174 45 21 chr20 16001262 16001328 -56152554 - L1MA9 LINE L1 -3 6309 6246 236 30 30 0 chr20 16001328 16001361 -56152521 + (TA)n Simple_repeat Simple_repeat 1 34 0 4760 174 45 21 chr20 16001361 16001415 -56152467 - L1MA9 LINE L1 -66 6246 6195 192 77 0 0 chr20 16001415 16001441 -56152441 + (TG)n Simple_repeat Simple_repeat 1 26 0 4760 174 45 21 chr20 16001441 16002425 -56151457 - L1MA9 LINE L1 -117 6195 5237 1685 168 32 0 chr20 16002425 16002705 -56151177 - AluSx SINE Alu -9 303 15 4760 174 45 21 chr20 16002705 16002823 -56151059 - L1MA9 LINE L1 -1075 5237 5123 7427 37 3 0 chr20 16002823 16003903 -56149979 + L1PA4 LINE L1 5071 6153 -2 4760 174 45 21 chr20 16003903 16004165 -56149717 - L1MA9 LINE L1 -1189 5123 4787 2182 167 56 31 chr20 16004767 16005181 -56148701 - MSTB LTR MaLR -2 424 1 439 317 25 50 chr20 16006036 16006235 -56147647 + MIR SINE MIR 66 259 -3 592 233 0 0 chr20 16006863 16006979 -56146903 + MER45A DNA AcHobo 35 150 -28 8801 190 63 16 chr20 16007299 16009185 -56144697 - L1MA4A LINE L1 -5 7000 4870 2268 57 64 0 chr20 16009185 16009466 -56144416 - AluY SINE Alu -11 300 2 8801 190 63 16 chr20 16009466 16010960 -56142922 - L1MA4A LINE L1 -2135 4870 3448 1568 128 0 9 chr20 16010962 16011180 -56142702 - AluSg/x SINE Alu -24 288 73 3194 263 99 42 chr20 16011180 16013751 -56140131 - L1MA4A LINE L1 -4083 2766 6 1945 82 0 4 chr20 16014344 16014600 -56139282 - AluY SINE Alu -1 310 56 41151 31 21 1 chr20 16014883 16020910 -56132972 + L1HS LINE L1 4 6153 -2 197 393 11 0 chr20 16020956 16021045 -56132837 + L2 LINE L2 2698 2787 -527 348 258 11 22 chr20 16021184 16021273 -56132609 + L2 LINE L2 3170 3257 -15 4320 112 3 8 chr20 16021353 16021968 -56131914 + LTR9 LTR ERV1 1 612 0 32 26 0 0 chr20 16022092 16022131 -56131751 + AT_rich Low_complexity Low_complexity 1 39 0 571 138 37 28 chr20 16022274 16022383 -56131499 + MSTC LTR MaLR 1 110 -318 2435 71 0 10 chr20 16022416 16022725 -56131157 - AluY SINE Alu -5 306 1 784 215 45 6 chr20 16022780 16022957 -56130925 + MIR SINE MIR 66 249 -13 231 36 0 0 chr20 16022959 16022987 -56130895 + (TTA)n Simple_repeat Simple_repeat 2 29 0 200 311 73 53 chr20 16023641 16023792 -56130090 - L2 LINE L2 -21 3292 3139 243 272 11 43 chr20 16024871 16024963 -56128919 + L1ME1 LINE L1 5915 6003 -163 587 191 19 19 chr20 16024965 16025127 -56128755 + L1MA10 LINE L1 6171 6332 -2 2041 101 40 3 chr20 16025136 16025434 -56128448 + AluSp SINE Alu 1 309 -4 23 33 0 0 chr20 16025566 16025596 -56128286 + AT_rich Low_complexity Low_complexity 1 30 0 2134 165 64 2 chr20 16027265 16027672 -56126210 + LTR32 LTR ERVL 6 437 -34 1280 258 45 24 chr20 16027673 16028138 -56125744 - L1ME3A LINE L1 -28 6142 5668 504 226 72 32 chr20 16028149 16028370 -56125512 - L1ME3A LINE L1 -765 5381 5152 2453 146 36 10 chr20 16028497 16028914 -56124968 + MSTA LTR MaLR 1 428 0 1123 194 115 3 chr20 16029653 16029941 -56123941 + MER33 DNA MER1_type 1 320 -4 258 81 0 0 chr20 16030040 16030077 -56123805 + (CA)n Simple_repeat Simple_repeat 2 38 0 384 246 18 9 chr20 16030593 16030703 -56123179 - MIR SINE MIR -35 227 117 2006 166 79 20 chr20 16030722 16031125 -56122757 + MSTC LTR MaLR 2 428 0 566 152 0 10 chr20 16031925 16032024 -56121858 + MER4A LTR ERV1 1 98 -566 1663 151 6 22 chr20 16032024 16032375 -56121507 + MER4A LTR ERV1 261 664 0 2069 124 32 24 chr20 16034263 16034633 -56119249 - THE1C LTR MaLR -2 373 1 783 257 87 18 chr20 16035272 16035746 -56118136 + L1ME3A LINE L1 5535 6068 -102 361 86 17 0 chr20 16035756 16035814 -56118068 + MADE1 DNA Mariner 22 80 0 386 235 0 20 chr20 16035817 16035919 -56117963 + L1ME3A LINE L1 6071 6170 0 264 350 29 44 chr20 16036001 16036138 -56117744 - L2 LINE L2 -2 3270 3136 407 295 92 29 chr20 16036657 16036830 -56117052 - MIR SINE MIR -44 218 35 332 339 29 12 chr20 16037812 16037983 -56115899 - MLT1H LTR MaLR -373 176 3 582 335 27 48 chr20 16038927 16039303 -56114579 + LTR16C LTR ERVL 99 466 -25 250 369 107 13 chr20 16039342 16039651 -56114231 + L2 LINE L2 1906 2243 -1071 779 226 72 0 chr20 16039713 16039908 -56113974 + MER3 DNA MER1_type 1 209 0 186 333 0 0 chr20 16039950 16039998 -56113884 + MIR SINE MIR 103 150 -58 333 348 117 20 chr20 16040080 16040389 -56113493 + L1M4 LINE L1 4681 5039 -1107 6035 106 11 8 chr20 16040389 16041548 -56112334 + L1PA13 LINE L1 4999 6161 -2 333 348 117 20 chr20 16041548 16041640 -56112242 + L1M4 LINE L1 5039 5121 -1025 242 267 0 0 chr20 16041702 16041762 -56112120 - L2 LINE L2 -72 3241 3182 406 270 10 0 chr20 16041797 16041897 -56111985 - MER94 DNA DNA -33 101 1 43 47 0 0 chr20 16042179 16042243 -56111639 + AT_rich Low_complexity Low_complexity 1 64 0 409 290 63 54 chr20 16042311 16042407 -56111475 - L1MC/D LINE L1 -302 5819 5725 1436 231 110 79 chr20 16042407 16043014 -56110868 + MLT1E2 LTR MaLR 1 626 0 409 290 63 54 chr20 16043014 16043462 -56110420 - L1MC/D LINE L1 -396 5725 5332 324 223 62 9 chr20 16044083 16044195 -56109687 - L1MC4 LINE L1 -2 8040 7923 1823 142 15 89 chr20 16044334 16044729 -56109153 - MER47A DNA MER2_type 0 366 1 667 239 77 32 chr20 16044741 16044988 -56108894 - L1ME2 LINE L1 -12 6152 5895 693 136 57 0 chr20 16047343 16047483 -56106399 + Charlie5 DNA MER1_type 2471 2618 0 269 218 36 0 chr20 16047497 16047552 -56106330 + MER58 DNA MER1_type 1 57 -158 * 334 203 0 0 chr20 16047549 16047613 -56106269 + MER58 DNA MER1_type 172 235 -2185 753 317 85 17 chr20 16048138 16048548 -56105334 + L2 LINE L2 1372 1809 -1505 3512 118 11 0 chr20 16048548 16049214 -56104668 + L1PB1 LINE L1 5120 5791 -360 216 114 24 73 chr20 16049218 16049341 -56104541 + (TA)n Simple_repeat Simple_repeat 1 117 0 2459 88 11 32 chr20 16049348 16049539 -56104343 + L1PB1 LINE L1 5782 5976 -175 2084 72 7 11 chr20 16049539 16049818 -56104064 + AluY SINE Alu 21 298 -13 207 0 0 0 chr20 16049818 16049841 -56104041 + (TA)n Simple_repeat Simple_repeat 1 23 0 2459 88 11 32 chr20 16049841 16050025 -56103857 + L1PB1 LINE L1 5974 6150 -1 1775 294 60 21 chr20 16050038 16050750 -56103132 + L2 LINE L2 1794 2533 -781 268 232 13 197 chr20 16050827 16051060 -56102822 + L2 LINE L2 3032 3221 -92 5771 116 15 8 chr20 16051121 16052937 -56100945 - L1PA13 LINE L1 -11 6152 4328 1254 212 48 15 chr20 16052937 16053267 -56100615 - MER63 DNA MER1_type -36 1025 685 222 291 58 23 chr20 16053267 16053353 -56100529 - MIR SINE MIR -152 110 22 2466 70 3 0 chr20 16053522 16053823 -56100059 + AluSx SINE Alu 1 302 -10 406 333 0 58 chr20 16054794 16054858 -56099024 + MIR SINE MIR 57 123 -139 234 0 0 0 chr20 16054858 16054884 -56098998 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1713 139 3 51 chr20 16054886 16055181 -56098701 - AluSx SINE Alu -31 281 1 406 333 0 58 chr20 16055181 16055320 -56098562 + MIR SINE MIR 124 251 -11 323 268 72 13 chr20 16055619 16055772 -56098110 + L1MC/D LINE L1 4915 5076 -1070 385 299 60 43 chr20 16056125 16056426 -56097456 + L1MC/D LINE L1 5510 5815 -1993 1202 276 49 56 chr20 16056988 16057871 -56096011 - L2 LINE L2 0 3313 2427 186 43 0 0 chr20 16059295 16059318 -56094564 + (T)n Simple_repeat Simple_repeat 1 23 0 292 320 108 26 chr20 16060033 16060227 -56093655 + MIR SINE MIR 1 210 -52 809 261 28 21 chr20 16061297 16061588 -56092294 + MLT1G LTR MaLR 298 590 0 1950 262 18 77 chr20 16061588 16062076 -56091806 - L2 LINE L2 -671 2643 2215 2370 176 25 59 chr20 16062076 16062599 -56091283 - LTR10B LTR ERV1 0 505 1 1950 262 18 77 chr20 16062599 16062880 -56091002 - L2 LINE L2 -1099 2215 1919 215 294 0 44 chr20 16062907 16062975 -56090907 - L2 LINE L2 -19 3294 3230 454 303 216 10 chr20 16063002 16063210 -56090672 - MIR SINE MIR -1 261 11 25 31 0 0 chr20 16063350 16063382 -56090500 + AT_rich Low_complexity Low_complexity 1 32 0 1395 208 0 54 chr20 16063412 16063706 -56090176 - AluJo SINE Alu -30 282 5 271 258 110 49 chr20 16064580 16064743 -56089139 + Charlie8 DNA MER1_type 2 174 -2243 1055 291 112 13 chr20 16065708 16066203 -56087679 - MLT1G1 LTR MaLR -3 592 5 1439 110 55 5 chr20 16066205 16066424 -56087458 + MER30 DNA MER1_type 1 230 0 604 252 126 18 chr20 16066902 16067124 -56086758 + MIR SINE MIR 16 261 -1 532 292 99 26 chr20 16067351 16067584 -56086298 + MIR SINE MIR 11 260 -2 214 136 17 51 chr20 16067723 16067782 -56086100 + CT-rich Low_complexity Low_complexity 3 59 0 513 324 61 27 chr20 16068142 16068583 -56085299 - L1M4 LINE L1 -1346 4800 4345 1098 293 91 0 chr20 16068996 16069382 -56084500 + LTR16C LTR ERVL 71 491 0 254 273 140 28 chr20 16069493 16069636 -56084246 + L2 LINE L2 2933 3091 -181 707 256 153 32 chr20 16069659 16070174 -56083708 + MLT1H LTR MaLR 1 595 0 403 252 161 39 chr20 16071114 16071344 -56082538 + MIR SINE MIR 5 262 0 984 150 67 0 chr20 16075200 16075393 -56078489 + L1MB3 LINE L1 5971 6176 -7 311 211 0 0 chr20 16075548 16075605 -56078277 + MIR SINE MIR 85 141 -121 197 291 10 0 chr20 16076514 16076617 -56077265 + CT-rich Low_complexity Low_complexity 1 104 0 306 273 18 43 chr20 16077548 16077668 -56076214 - MIR SINE MIR -81 127 10 1036 291 71 8 chr20 16078303 16078681 -56075201 + LTR16C LTR ERVL 90 491 0 1860 191 41 59 chr20 16079130 16079558 -56074324 - MLT1D LTR MaLR -2 503 84 1541 148 7 10 chr20 16079558 16079848 -56074034 - L1MA8 LINE L1 -6 6285 5997 1860 191 41 59 chr20 16079848 16079931 -56073951 - MLT1D LTR MaLR -421 84 1 2072 250 34 32 chr20 16080115 16080679 -56073203 - L1ME3A LINE L1 -13 6157 5591 1787 146 60 30 chr20 16080679 16081043 -56072839 + THE1C LTR MaLR 1 375 0 2072 250 34 32 chr20 16081043 16081208 -56072674 - L1ME3A LINE L1 -579 5591 5428 350 203 14 0 chr20 16081207 16081281 -56072601 - L1ME2 LINE L1 -10 6154 6080 * 748 246 33 24 chr20 16082441 16082652 -56071230 - MLT1J2 LTR MaLR -237 213 1 207 0 0 0 chr20 16083831 16083854 -56070028 + (T)n Simple_repeat Simple_repeat 1 23 0 2453 75 3 0 chr20 16083979 16084287 -56069595 + AluY SINE Alu 1 309 -2 255 202 45 103 chr20 16084621 16084948 -56068934 + LTR37A LTR ERV1 90 400 -68 517 199 50 84 chr20 16084953 16085215 -56068667 + LTR37B LTR ERV1 212 464 -4 260 289 60 78 chr20 16085276 16085494 -56068388 - MIR SINE MIR -30 232 19 1649 172 18 7 chr20 16085633 16085918 -56067964 - AluJb SINE Alu -24 288 1 225 111 0 48 chr20 16085949 16086012 -56067870 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 997 220 83 8 chr20 16086643 16086884 -56066998 - L1ME3A LINE L1 -104 6066 5808 363 44 0 0 chr20 16086953 16086998 -56066884 + (CA)n Simple_repeat Simple_repeat 2 46 0 4265 170 32 35 chr20 16087488 16088576 -56065306 - L1MB8 LINE L1 -1 6177 5098 385 230 18 44 chr20 16089236 16089349 -56064533 + MIR SINE MIR 83 192 -70 250 188 16 62 chr20 16089516 16089580 -56064302 + MIR SINE MIR 157 217 -45 399 211 26 0 chr20 16089843 16089919 -56063963 + MIR SINE MIR 44 121 -87 564 263 68 10 chr20 16090238 16090443 -56063439 - L1ME3A LINE L1 -10 6160 5944 271 284 128 0 chr20 16090537 16090639 -56063243 + L1ME LINE L1 5547 5661 -460 376 173 0 0 chr20 16091121 16091196 -56062686 + L1MA4 LINE L1 6101 6175 -125 * 381 291 33 95 chr20 16091195 16091625 -56062257 + L1MC4a LINE L1 5536 5938 -183 2128 112 0 7 chr20 16091792 16092118 -56061764 + AluSq SINE Alu 1 324 0 386 225 27 63 chr20 16093481 16093592 -56060290 - MIR SINE MIR -82 180 74 2137 92 7 33 chr20 16094319 16094623 -56059259 - AluY SINE Alu -15 296 1 364 200 47 35 chr20 16096309 16096394 -56057488 + MIR3 SINE MIR 115 200 -8 2139 109 0 57 chr20 16096665 16096996 -56056886 + AluSx SINE Alu 1 312 0 590 265 58 9 chr20 16097078 16097301 -56056581 + L1MA9 LINE L1 6039 6272 -40 275 305 76 9 chr20 16097472 16097577 -56056305 + MIR SINE MIR 31 142 -120 372 317 69 7 chr20 16098402 16098547 -56055335 - MIR3 SINE MIR -52 156 3 405 179 84 0 chr20 16099035 16099130 -56054752 + MER3 DNA MER1_type 90 192 -17 242 200 0 0 chr20 16099104 16099154 -56054728 - MER3 DNA MER1_type -119 90 41 * 349 188 225 0 chr20 16099290 16099370 -56054512 - MER3 DNA MER1_type -111 98 1 22 0 0 0 chr20 16099472 16099494 -56054388 + AT_rich Low_complexity Low_complexity 1 22 0 808 316 49 35 chr20 16099661 16100151 -56053731 + L1ME3A LINE L1 264 760 -5359 851 292 65 50 chr20 16100164 16100760 -56053122 + L1ME3A LINE L1 3328 3932 -2197 619 294 68 31 chr20 16100795 16101556 -56052326 + L1ME3A LINE L1 4022 4810 -1319 227 219 76 91 chr20 16101598 16101753 -56052129 - MLT1J2 LTR MaLR -1 408 239 1065 282 72 34 chr20 16102057 16102667 -56051215 + L1ME3A LINE L1 5303 5939 -214 524 78 39 0 chr20 16103103 16103180 -56050702 - MADE1 DNA Mariner 0 80 1 474 18 0 0 chr20 16103270 16103325 -56050557 + (TC)n Simple_repeat Simple_repeat 2 56 0 324 0 0 0 chr20 16103324 16103360 -56050522 + (TG)n Simple_repeat Simple_repeat 1 36 0 * 386 269 155 16 chr20 16103418 16103727 -56050155 + HAL1 LINE L1 996 1347 -1160 1224 87 0 0 chr20 16103907 16104128 -56049754 + (TCCA)n Simple_repeat Simple_repeat 1 221 0 226 312 64 46 chr20 16104357 16104530 -56049352 - L1MC/D LINE L1 -1907 5901 5726 1773 236 69 47 chr20 16105602 16106237 -56047645 - L1ME2 LINE L1 -30 6134 5486 192 265 78 91 chr20 16106438 16106668 -56047214 + L2 LINE L2 2809 3035 -237 184 255 0 0 chr20 16106842 16106889 -56046993 + L2 LINE L2 3226 3272 0 463 196 10 10 chr20 16107258 16107355 -56046527 - Charlie1b DNA MER1_type 0 523 427 1129 194 74 19 chr20 16107355 16107613 -56046269 - Charlie1b DNA MER1_type -251 272 1 1731 236 111 36 chr20 16107969 16108681 -56045201 + MER20B DNA MER1_type 6 770 -13 7762 162 7 9 chr20 16108834 16111319 -56042563 + L1PB1 LINE L1 3673 6151 0 4799 115 5 8 chr20 16111320 16112058 -56041824 + L1PA13 LINE L1 5428 6163 0 335 296 140 22 chr20 16112478 16112657 -56041225 + MIR SINE MIR 20 219 -43 2028 121 45 0 chr20 16113919 16114209 -56039673 - AluSx SINE Alu -7 305 3 1660 201 169 5 chr20 16114242 16114679 -56039203 - LTR22 LTR ERVK 0 509 1 197 257 229 19 chr20 16115332 16115437 -56038445 + MIR SINE MIR 94 220 -42 454 262 32 0 chr20 16117047 16117196 -56036686 + L1ME3A LINE L1 6006 6163 -2 1186 246 133 27 chr20 16118193 16118637 -56035245 + LTR16C LTR ERVL 1 491 0 1367 207 123 22 chr20 16118732 16119089 -56034793 + MSTD LTR MaLR 1 393 -3 21 36 0 0 chr20 16119899 16119927 -56033955 + AT_rich Low_complexity Low_complexity 1 28 0 347 233 56 11 chr20 16121365 16121455 -56032427 + MIR SINE MIR 123 216 -46 513 290 82 49 chr20 16121536 16121926 -56031956 + L1ME3A LINE L1 5653 6055 -115 391 263 0 0 chr20 16122538 16122618 -56031264 - L2 LINE L2 0 3272 3193 2604 113 78 11 chr20 16123476 16123816 -56030066 - L1PB1 LINE L1 -2 6149 5770 324 0 0 0 chr20 16123816 16123852 -56030030 + (TA)n Simple_repeat Simple_repeat 1 36 0 2604 113 78 11 chr20 16123852 16123961 -56029921 - L1PB1 LINE L1 -381 5770 5670 282 333 9 9 chr20 16124519 16124627 -56029255 + MER5C DNA MER1_type 16 123 -201 4319 146 62 10 chr20 16125400 16126211 -56027671 + L1MA4A LINE L1 5440 6292 -11 24 0 0 0 chr20 16126216 16126240 -56027642 + AT_rich Low_complexity Low_complexity 1 24 0 203 32 65 0 chr20 16126474 16126505 -56027377 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 3444 176 54 112 chr20 16126507 16126686 -56027196 + MER21A LTR ERV1 26 214 -717 1686 15 0 20 chr20 16126686 16126887 -56026995 + AluY SINE Alu 108 304 -7 3444 176 54 112 chr20 16126887 16127651 -56026231 + MER21A LTR ERV1 214 914 -17 222 275 170 35 chr20 16127760 16127931 -56025951 + MER5C DNA MER1_type 128 321 -3 21 0 0 0 chr20 16128330 16128351 -56025531 + AT_rich Low_complexity Low_complexity 1 21 0 2308 126 0 18 chr20 16128351 16128732 -56025150 - L1PB1 LINE L1 -1 6150 5777 210 191 0 0 chr20 16128742 16128784 -56025098 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 3575 162 13 6 chr20 16128791 16129977 -56023905 - L1PB1 LINE L1 -369 5782 4586 * 5992 202 9 30 chr20 16129973 16130133 -56023749 + L1M4c LINE L1 2323 2485 -3897 6258 28 3 1 chr20 16130133 16130902 -56022980 + L1PA3 LINE L1 5409 6155 0 5992 202 9 30 chr20 16130902 16132186 -56021696 + L1M4c LINE L1 2485 3735 -2647 29 28 0 0 chr20 16133016 16133052 -56020830 + AT_rich Low_complexity Low_complexity 1 36 0 465 236 45 19 chr20 16134559 16134716 -56019166 - LTR45 LTR ERV1 0 525 365 1758 121 23 4 chr20 16135112 16135369 -56018513 + AluSg SINE Alu 32 293 -17 1539 235 66 33 chr20 16136323 16136808 -56017074 + MER90 LTR ERV1 1 501 -113 322 283 81 0 chr20 16137236 16137335 -56016547 + L1ME1 LINE L1 1468 1574 -4968 2590 226 64 19 chr20 16137335 16138271 -56015611 + L1ME1 LINE L1 5684 6658 -6 320 93 0 0 chr20 16138308 16138351 -56015531 + Alu SINE Alu 249 291 -11 6910 177 10 10 chr20 16138730 16141202 -56012680 - L1PB1 LINE L1 0 6151 3681 657 274 20 0 chr20 16141495 16141692 -56012190 - MER58A DNA MER1_type -17 207 7 197 62 0 31 chr20 16141965 16141975 -56011907 + (CA)n Simple_repeat Simple_repeat 2 11 -21 1669 118 9 115 chr20 16141975 16142305 -56011577 + AluSp SINE Alu 1 295 -18 197 62 0 31 chr20 16142305 16142326 -56011556 + (CA)n Simple_repeat Simple_repeat 11 32 0 274 333 8 8 chr20 16142583 16142706 -56011176 + MER5C DNA MER1_type 1 123 -201 4153 154 63 6 chr20 16143490 16144302 -56009580 + L1MA4A LINE L1 5440 6297 -6 204 86 86 0 chr20 16144557 16144627 -56009255 + (TA)n Simple_repeat Simple_repeat 1 76 0 3090 170 62 130 chr20 16144627 16145193 -56008689 + MER21A LTR ERV1 9 484 -447 2186 87 0 14 chr20 16145193 16145537 -56008345 - AluY SINE Alu 0 340 1 3090 170 62 130 chr20 16145537 16145941 -56007941 + MER21A LTR ERV1 484 914 -17 230 220 119 51 chr20 16146085 16146203 -56007679 + MER5C DNA MER1_type 199 324 0 28 0 0 0 chr20 16147419 16147447 -56006435 + AT_rich Low_complexity Low_complexity 1 28 0 356 215 61 61 chr20 16148972 16149135 -56004747 - LTR45B LTR ERV1 -15 474 312 1379 104 0 0 chr20 16149351 16149534 -56004348 - AluY SINE Alu 0 311 129 2370 253 66 21 chr20 16150578 16151557 -56002325 + L1MB8 LINE L1 3786 4808 -1338 2341 239 52 18 chr20 16151626 16152351 -56001531 + L1MB8 LINE L1 5425 6174 -4 304 218 11 45 chr20 16152505 16152684 -56001198 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 21 36 0 0 chr20 16153870 16153898 -55999984 + AT_rich Low_complexity Low_complexity 1 28 0 1761 236 32 9 chr20 16154405 16154842 -55999040 + MER90 LTR ERV1 3 449 -165 1352 254 8 17 chr20 16154851 16155210 -55998672 + MLT1A1 LTR MaLR 10 365 0 578 200 69 7 chr20 16155213 16155358 -55998524 + MER90 LTR ERV1 448 601 -13 * 1024 158 47 0 chr20 16155355 16155545 -55998337 + MER66B LTR ERV1 286 484 -2 491 279 96 25 chr20 16155628 16155868 -55998014 - MIR SINE MIR 0 262 6 182 266 53 44 chr20 16156879 16156992 -55996890 - MIR SINE MIR -65 143 30 3967 94 28 0 chr20 16157019 16157583 -55996299 - LTR19B LTR ERV1 0 580 1 521 306 53 36 chr20 16157820 16158121 -55995761 + MLT1L LTR MaLR 88 393 -222 280 270 56 11 chr20 16159161 16159250 -55994632 - MIR SINE MIR -50 212 120 502 316 93 9 chr20 16159991 16160206 -55993676 - MIR SINE MIR -10 252 20 2136 177 39 0 chr20 16160407 16160814 -55993068 - MSTA LTR MaLR 0 428 6 3562 147 10 2 chr20 16160819 16161404 -55992478 - MSTA-int LTR MaLR 0 1651 1062 3215 154 11 0 chr20 16161426 16161991 -55991891 - MSTA-int LTR MaLR -1080 571 1 2316 171 24 0 chr20 16161991 16162401 -55991481 - MSTA LTR MaLR 0 428 9 1039 217 61 50 chr20 16164275 16164653 -55989229 - MER66A LTR ERV1 -52 426 45 702 171 44 13 chr20 16165197 16165355 -55988527 + L1ME3A LINE L1 6008 6170 0 374 0 0 21 chr20 16165399 16165446 -55988436 + (CA)n Simple_repeat Simple_repeat 2 47 0 576 285 75 73 chr20 16166143 16166582 -55987300 - MER21B LTR ERV1 -326 537 98 331 265 23 53 chr20 16166559 16166691 -55987191 - MER77 LTR ERV1 -412 193 66 * 824 265 102 41 chr20 16167120 16167512 -55986370 + LTR16C LTR ERVL 66 481 -10 333 0 0 0 chr20 16167692 16167729 -55986153 + (TG)n Simple_repeat Simple_repeat 2 38 0 2063 105 0 14 chr20 16168105 16168416 -55985466 + AluSx SINE Alu 1 307 0 418 209 15 124 chr20 16170149 16170337 -55983545 - LTR48 LTR ERV1 0 731 521 967 153 37 161 chr20 16170400 16170778 -55983104 - LTR49 LTR ERV1 -263 332 2 323 255 33 30 chr20 16170917 16171052 -55982830 + L1ME LINE L1 5476 5612 -509 1140 106 0 0 chr20 16171054 16171205 -55982677 + AluSp/q SINE Alu 162 312 -1 337 207 37 0 chr20 16171239 16171321 -55982561 + MIR SINE MIR 124 208 -54 22 0 0 0 chr20 16171484 16171506 -55982376 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 16172250 16172274 -55981608 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 16172695 16172725 -55981157 + AT_rich Low_complexity Low_complexity 1 30 0 1666 207 22 56 chr20 16173216 16173660 -55980222 - LTR65 LTR ERV1 -2 667 239 1249 189 23 12 chr20 16173661 16173920 -55979962 + MLT1E2 LTR MaLR 308 569 -57 1189 161 28 4 chr20 16173958 16174206 -55979676 - LTR65 LTR ERV1 -415 254 1 568 275 28 34 chr20 16174233 16174411 -55979471 - MIR SINE MIR -63 199 23 544 303 80 11 chr20 16174673 16174861 -55979021 - MIR SINE MIR -57 205 5 182 263 0 70 chr20 16175420 16175477 -55978405 + L2 LINE L2 3215 3267 -5 435 343 101 32 chr20 16176016 16176523 -55977359 - LTR67 LTR ERVL -14 543 2 406 241 14 164 chr20 16176716 16176776 -55977106 - MIR SINE MIR -13 249 182 1962 117 3 17 chr20 16176776 16177102 -55976780 - AluSg SINE Alu 0 310 1 406 241 14 164 chr20 16177102 16177327 -55976555 - MIR SINE MIR -80 182 7 946 148 0 51 chr20 16177829 16178045 -55975837 - Tigger3(Golem) DNA MER2_type -1 3028 2824 269 273 10 20 chr20 16278293 16278376 -55875506 + Charlie7 DNA MER1_type 1 84 -2528 2507 87 0 0 chr20 16278376 16278687 -55875195 - AluSx SINE Alu -1 311 1 269 273 10 20 chr20 16278687 16278702 -55875180 + Charlie7 DNA MER1_type 84 98 -2514 * 288 153 20 51 chr20 16278691 16278788 -55875094 + Charlie7 DNA MER1_type 2434 2527 -85 787 297 84 23 chr20 16278788 16279182 -55874700 - MER90 LTR ERV1 0 614 197 192 376 12 0 chr20 16279835 16279920 -55873962 - L2 LINE L2 -8 3264 3179 186 189 0 0 chr20 16279926 16279963 -55873919 + (TG)n Simple_repeat Simple_repeat 2 38 0 377 302 135 60 chr20 16280012 16280774 -55873108 + L2 LINE L2 1854 2672 -642 180 111 0 0 chr20 16281859 16281886 -55871996 + (T)n Simple_repeat Simple_repeat 1 27 0 336 265 20 93 chr20 16284269 16284325 -55869557 + MIR SINE MIR 48 107 -155 2006 116 34 31 chr20 16284325 16284617 -55869265 - AluSq SINE Alu -20 293 1 336 265 20 93 chr20 16284617 16284711 -55869171 + MIR SINE MIR 107 187 -75 381 303 38 23 chr20 16284832 16284964 -55868918 - L3 LINE CR1 -529 1048 915 566 307 35 10 chr20 16285110 16285312 -55868570 - MIR SINE MIR 0 262 56 181 400 11 0 chr20 16285539 16285629 -55868253 - L3 LINE CR1 -863 714 624 243 103 0 0 chr20 16285680 16285719 -55868163 + (TG)n Simple_repeat Simple_repeat 2 40 0 2242 94 0 0 chr20 16285941 16286228 -55867654 - AluY SINE Alu -24 287 1 2032 111 10 27 chr20 16286576 16286874 -55867008 - AluSx SINE Alu -19 293 1 351 301 55 41 chr20 16287065 16287211 -55866671 + MIR SINE MIR 3 150 -58 231 242 101 50 chr20 16287353 16287452 -55866430 - MIR SINE MIR -63 145 42 339 314 74 17 chr20 16289196 16289371 -55864511 + MLT1K LTR MaLR 347 531 -57 586 263 107 33 chr20 16289444 16289687 -55864195 - MIR SINE MIR 0 262 2 256 341 44 0 chr20 16290877 16290968 -55862914 - L2 LINE L2 -290 3023 2929 237 333 86 8 chr20 16292771 16292888 -55860994 + MIR SINE MIR 119 244 -18 561 209 22 37 chr20 16292913 16293047 -55860835 + MER5B DNA MER1_type 1 132 -46 181 250 0 0 chr20 16294769 16294809 -55859073 - L2 LINE L2 -12 3301 3262 * 208 222 0 27 chr20 16294792 16294862 -55859020 - MIR SINE MIR -63 145 104 4082 70 4 0 chr20 16295331 16295833 -55858049 - L1PA14 LINE L1 -1 6160 5657 4266 166 8 5 chr20 16295858 16296625 -55857257 - L1P LINE L1 -1231 4915 4147 2417 66 0 3 chr20 16296698 16296987 -55856895 + AluY SINE Alu 1 288 -23 183 330 134 0 chr20 16297028 16297125 -55856757 - MER5B DNA MER1_type -68 110 1 381 215 31 11 chr20 16297230 16297356 -55856526 + MIR SINE MIR 38 167 -62 387 233 180 79 chr20 16298216 16298405 -55855477 + MIR SINE MIR 34 241 -21 1632 193 89 29 chr20 16298783 16299216 -55854666 + MLT1E3 LTR MaLR 200 624 0 1153 240 138 48 chr20 16302040 16302452 -55851430 + MLT1J2 LTR MaLR 1 449 -1 428 300 45 40 chr20 16303552 16303752 -55850130 - L2 LINE L2 -87 3226 3026 25 0 0 0 chr20 16304277 16304302 -55849580 + AT_rich Low_complexity Low_complexity 1 25 0 369 137 55 7 chr20 16305022 16305168 -55848714 + (TA)n Simple_repeat Simple_repeat 2 154 0 1646 180 0 10 chr20 16305169 16305458 -55848424 - AluSx SINE Alu -26 286 1 22 0 0 0 chr20 16306587 16306609 -55847273 + AT_rich Low_complexity Low_complexity 1 22 0 220 220 20 0 chr20 16306958 16307008 -55846874 + CT-rich Low_complexity Low_complexity 2 52 0 505 162 324 14 chr20 16307111 16307253 -55846629 - MER5A DNA MER1_type -3 186 1 211 155 0 103 chr20 16307573 16307631 -55846251 - L2 LINE L2 -1 3312 3261 2376 155 42 35 chr20 16307658 16308084 -55845798 + LTR32 LTR ERVL 14 442 -29 1773 115 0 0 chr20 16308087 16308321 -55845561 - AluSx SINE Alu -78 234 1 352 133 239 26 chr20 16308415 16308528 -55845354 + MER5A DNA MER1_type 1 137 -52 1201 283 102 32 chr20 16309119 16309297 -55844585 - L2 LINE L2 -4 3309 3145 2219 118 3 0 chr20 16309297 16309601 -55844281 + AluSx SINE Alu 1 305 -7 1201 283 102 32 chr20 16309601 16310229 -55843653 - L2 LINE L2 -168 3145 2443 383 284 219 0 chr20 16310280 16310435 -55843447 - MIR SINE MIR -14 248 60 203 276 40 40 chr20 16310911 16310987 -55842895 - L2 LINE L2 -41 3272 3197 1808 143 0 73 chr20 16312474 16312606 -55841276 + AluSx SINE Alu 4 144 -168 2171 108 34 0 chr20 16312606 16312901 -55840981 + AluSq SINE Alu 1 305 -8 1808 143 0 73 chr20 16312901 16313097 -55840785 + AluSx SINE Alu 144 308 -4 543 257 107 43 chr20 16313158 16313474 -55840408 + MLT1I LTR MaLR 74 409 0 296 306 0 0 chr20 16313474 16313546 -55840336 - L3 LINE CR1 -30 1547 1476 430 330 37 37 chr20 16313586 16313777 -55840105 - MIR SINE MIR 0 262 72 194 211 118 13 chr20 16313912 16313988 -55839894 - MIR3 SINE MIR 0 208 125 205 335 161 21 chr20 16315468 16315704 -55838178 - L2 LINE L2 -15 3298 3030 1960 236 103 6 chr20 16315825 16316309 -55837573 + MLT1H LTR MaLR 11 541 -8 266 299 9 27 chr20 16317188 16317353 -55836529 + CT-rich Low_complexity Low_complexity 1 162 0 467 168 11 0 chr20 16317384 16317479 -55836403 + CT-rich Low_complexity Low_complexity 1 96 0 955 250 29 12 chr20 16318172 16318412 -55835470 + MIR SINE MIR 3 246 -16 2266 99 0 0 chr20 16318430 16318724 -55835158 - AluSx SINE Alu -18 294 1 641 312 65 5 chr20 16319082 16319281 -55834601 - MIR SINE MIR -38 224 14 218 136 23 0 chr20 16321510 16321554 -55832328 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 222 281 18 0 chr20 16322104 16322161 -55831721 + GA-rich Low_complexity Low_complexity 3 60 0 860 223 17 0 chr20 16324866 16325041 -55828841 - MER5A DNA MER1_type -11 178 1 26 50 0 0 chr20 16325518 16325558 -55828324 + AT_rich Low_complexity Low_complexity 1 40 0 372 331 24 18 chr20 16325840 16326009 -55827873 + MIR SINE MIR 67 236 -26 269 156 0 36 chr20 16327558 16327614 -55826268 - MIR3 SINE MIR -54 154 100 288 260 31 10 chr20 16327715 16327811 -55826071 + MIR SINE MIR 47 144 -64 245 235 82 47 chr20 16328108 16328193 -55825689 - MIR SINE MIR -171 91 4 2029 152 0 0 chr20 16328569 16328872 -55825010 - AluSx SINE Alu -9 303 1 264 205 64 64 chr20 16328946 16329024 -55824858 - MIR3 SINE MIR -40 168 91 669 260 146 45 chr20 16329184 16329715 -55824167 + MLT1H1 LTR MaLR 1 550 -5 891 204 87 29 chr20 16330240 16330446 -55823436 - MER20 DNA MER1_type 0 219 2 250 215 77 15 chr20 16331035 16331100 -55822782 - LTR16A1 LTR ERVL -184 273 205 910 272 39 12 chr20 16332203 16332457 -55821425 - MIR SINE MIR 0 262 2 1540 126 39 4 chr20 16332971 16333201 -55820681 + AluSg/x SINE Alu 66 303 -9 289 296 43 37 chr20 16334273 16334435 -55819447 + L2 LINE L2 1935 2097 -1217 370 328 8 31 chr20 16334497 16334625 -55819257 - MER5A DNA MER1_type 0 189 65 747 263 30 38 chr20 16334775 16335019 -55818863 + MLT1H LTR MaLR 39 279 -270 2299 111 36 25 chr20 16337187 16337547 -55816335 - THE1B LTR MaLR 0 364 1 647 250 114 26 chr20 16339265 16339493 -55814389 + MIR SINE MIR 15 262 0 219 69 0 0 chr20 16339921 16339950 -55813932 + (CAG)n Simple_repeat Simple_repeat 1 29 0 310 277 185 15 chr20 16339950 16340070 -55813812 + MER5A DNA MER1_type 44 189 0 1015 230 28 57 chr20 16340574 16340892 -55812990 + LTR16C LTR ERVL 183 491 0 445 298 111 25 chr20 16340899 16341097 -55812785 + MIR SINE MIR 40 254 -8 635 242 0 0 chr20 16341204 16341324 -55812558 - FLAM_A SINE Alu -13 120 1 1635 216 60 50 chr20 16342287 16342783 -55811099 - MLT1D LTR MaLR -2 503 3 551 319 92 0 chr20 16342906 16343091 -55810791 + MIR SINE MIR 59 260 -2 339 184 43 57 chr20 16343278 16343419 -55810463 - L1MC4 LINE L1 -1 8041 7903 304 271 56 0 chr20 16343451 16343558 -55810324 - L1MC4 LINE L1 -124 7918 7806 482 189 123 8 chr20 16343593 16343715 -55810167 - MER58C DNA MER1_type 0 215 80 568 291 82 28 chr20 16343809 16344163 -55809719 - L1MC4 LINE L1 -288 7754 7382 188 33 0 33 chr20 16344185 16344215 -55809667 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 383 304 121 34 chr20 16344723 16344930 -55808952 - MIR SINE MIR -17 245 21 2777 182 48 40 chr20 16345000 16345691 -55808191 - L1ME2 LINE L1 -19 6145 5450 189 389 57 64 chr20 16345746 16345903 -55807979 + L2 LINE L2 3101 3256 -16 230 261 15 31 chr20 16346086 16346151 -55807731 - MER5B DNA MER1_type -20 158 95 245 330 20 10 chr20 16346295 16346395 -55807487 - MER5B DNA MER1_type -77 101 1 216 253 11 46 chr20 16347236 16347323 -55806559 + GA-rich Low_complexity Low_complexity 2 85 0 195 204 0 0 chr20 16347335 16347379 -55806503 + (TG)n Simple_repeat Simple_repeat 1 44 0 498 279 25 13 chr20 16347433 16347591 -55806291 - MIR3 SINE MIR -6 202 43 394 253 5 99 chr20 16349159 16349380 -55804502 - L1MC4 LINE L1 -213 7829 7630 293 384 81 34 chr20 16349584 16349907 -55803975 + L2 LINE L2 2935 3272 0 2348 103 0 0 chr20 16350173 16350475 -55803407 - AluSc SINE Alu -3 306 5 1619 239 74 9 chr20 16350761 16351208 -55802674 + L1ME3A LINE L1 5660 6135 -35 375 296 98 0 chr20 16351377 16351509 -55802373 - MIR SINE MIR -13 249 105 565 222 136 0 chr20 16351686 16351862 -55802020 + Charlie5 DNA MER1_type 1 200 -2412 * 929 201 18 25 chr20 16351860 16351962 -55801920 + Charlie5 DNA MER1_type 2352 2453 -171 2123 131 3 3 chr20 16351962 16352268 -55801614 - AluSx SINE Alu -6 306 1 929 201 18 25 chr20 16352268 16352439 -55801443 + Charlie5 DNA MER1_type 2453 2623 -1 2045 114 3 39 chr20 16352842 16353149 -55800733 + AluSx SINE Alu 1 296 -16 2289 77 37 0 chr20 16353149 16353447 -55800435 + AluY SINE Alu 1 309 -2 214 308 26 26 chr20 16353678 16353756 -55800126 + MIR SINE MIR 20 97 -111 213 222 185 0 chr20 16354118 16354172 -55799710 + L2 LINE L2 3182 3245 -27 1629 171 29 41 chr20 16354676 16354992 -55798890 + AluJo SINE Alu 1 312 0 247 247 95 79 chr20 16356924 16357114 -55796768 - MIR SINE MIR -4 258 66 536 191 55 109 chr20 16357120 16357340 -55796542 - MIR SINE MIR -24 238 31 304 375 59 0 chr20 16358132 16358268 -55795614 + MIR3 SINE MIR 65 208 0 1112 194 49 0 chr20 16359095 16359342 -55794540 - MER58B DNA MER1_type -4 337 79 252 249 85 67 chr20 16359437 16359602 -55794280 + MIR3 SINE MIR 34 201 -7 21 0 0 0 chr20 16360225 16360246 -55793636 + AT_rich Low_complexity Low_complexity 1 21 0 844 225 70 12 chr20 16360464 16360708 -55793174 + LTR56 LTR ERV1 188 445 0 270 295 128 45 chr20 16360806 16361165 -55792717 - L1ME LINE L1 -298 5823 5435 2155 109 0 14 chr20 16361250 16361544 -55792338 - AluSc SINE Alu -19 290 1 325 288 69 25 chr20 16361580 16361740 -55792142 - L1ME LINE L1 -820 5326 5160 189 147 0 0 chr20 16362220 16362254 -55791628 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 198 0 0 0 chr20 16362267 16362289 -55791593 + (TGG)n Simple_repeat Simple_repeat 1 22 0 271 269 7 28 chr20 16362541 16362686 -55791196 - L1ME LINE L1 -1549 4597 4456 249 308 62 14 chr20 16363194 16363402 -55790480 - L1ME LINE L1 -2036 4110 3893 70 81 0 0 chr20 16363525 16363686 -55790196 + AT_rich Low_complexity Low_complexity 1 161 0 827 203 11 28 chr20 16363810 16363987 -55789895 + AluJo SINE Alu 121 294 -18 28 61 0 0 chr20 16364461 16364510 -55789372 + AT_rich Low_complexity Low_complexity 1 49 0 374 313 45 45 chr20 16366878 16367057 -55786825 - L2 LINE L2 -92 3221 3043 1874 194 34 17 chr20 16368376 16368846 -55785036 + L1MA4 LINE L1 5815 6292 -8 3067 126 16 16 chr20 16370147 16370656 -55783226 - MER75 DNA T2_type 0 514 6 231 219 252 8 chr20 16370913 16371032 -55782850 + L2 LINE L2 2701 2848 -466 2215 119 0 45 chr20 16372070 16372423 -55781459 + MER1B DNA MER1_type 1 337 0 543 31 0 0 chr20 16374665 16374730 -55779152 + (TA)n Simple_repeat Simple_repeat 1 65 0 254 182 0 61 chr20 16374976 16375042 -55778840 + GA-rich Low_complexity Low_complexity 3 64 0 1931 143 3 0 chr20 16375276 16375605 -55778277 + L1MA9 LINE L1 4721 5050 -1096 * 1998 137 16 18 chr20 16375594 16375981 -55777901 + L1MA9 LINE L1 5894 6279 -33 219 254 0 61 chr20 16376000 16376114 -55777768 + A-rich Low_complexity Low_complexity 2 108 0 420 162 0 0 chr20 16376157 16376231 -55777651 + MER116 DNA Mariner 2 75 -5 552 305 94 37 chr20 16376669 16377075 -55776807 + L1MB8 LINE L1 4231 4659 -1487 1768 128 60 24 chr20 16377172 16377524 -55776358 + AluSx SINE Alu 1 363 0 1239 127 11 0 chr20 16377570 16377751 -55776131 + AluSg/x SINE Alu 129 311 -1 1876 131 0 33 chr20 16377819 16378155 -55775727 + AluSx SINE Alu 4 312 0 338 297 68 56 chr20 16378505 16378842 -55775040 + L1MB8 LINE L1 5313 5653 -468 313 269 71 43 chr20 16378920 16379061 -55774821 + L1MB8 LINE L1 5776 5920 -258 235 294 14 48 chr20 16379330 16379476 -55774406 - MARNA DNA Mariner -63 523 383 1516 278 91 22 chr20 16379625 16380261 -55773621 - L2 LINE L2 -310 3003 2325 411 239 161 0 chr20 16380270 16380425 -55773457 - L2 LINE L2 -1745 1569 1390 2242 137 133 74 chr20 16380425 16380618 -55773264 + LTR64 LTR ERVK 1 181 -377 3983 147 30 1 chr20 16380618 16380933 -55772949 + L1PB4 LINE L1 5459 5764 -392 195 42 0 0 chr20 16380933 16380957 -55772925 + (CA)n Simple_repeat Simple_repeat 1 24 0 3983 147 30 1 chr20 16380957 16381320 -55772562 + L1PB4 LINE L1 5764 6156 0 2242 137 133 74 chr20 16381320 16381354 -55772528 + LTR64 LTR ERVK 181 212 -346 360 0 0 0 chr20 16381354 16381394 -55772488 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 2242 137 133 74 chr20 16381394 16381692 -55772190 + LTR64 LTR ERVK 212 558 0 637 292 20 0 chr20 16381692 16381894 -55771988 - L2 LINE L2 -1921 1393 1188 229 267 74 91 chr20 16381918 16382094 -55771788 - L2 LINE L2 -2282 1032 860 188 138 0 0 chr20 16382106 16382135 -55771747 + MER5B DNA MER1_type 150 178 0 309 235 15 0 chr20 16382347 16382415 -55771467 - MER5A DNA MER1_type 0 189 121 1009 223 50 18 chr20 16382629 16382912 -55770970 + MER87 LTR ERV1 211 502 -39 509 192 8 0 chr20 16383508 16383633 -55770249 + (TCCA)n Simple_repeat Simple_repeat 1 126 0 761 306 85 35 chr20 16383642 16384067 -55769815 - L2 LINE L2 -40 3273 2828 1017 157 7 0 chr20 16384622 16384775 -55769107 - FRAM SINE Alu -23 153 1 905 107 36 0 chr20 16385138 16385445 -55768437 + GA-rich Low_complexity Low_complexity 5 319 0 535 303 73 51 chr20 16387291 16387703 -55766179 + MLT1J LTR MaLR 1 421 -90 424 38 0 0 chr20 16387812 16387865 -55766017 - MADE1 DNA Mariner -27 53 1 650 281 25 10 chr20 16387889 16388092 -55765790 + L1MC4 LINE L1 6797 7002 -1040 226 344 10 0 chr20 16391903 16391999 -55761883 + MIR SINE MIR 17 113 -95 2291 98 0 35 chr20 16392093 16392411 -55761471 - AluSq SINE Alu -6 307 1 281 301 58 0 chr20 16392474 16392577 -55761305 + MLT1H LTR MaLR 197 305 -244 347 281 10 0 chr20 16392684 16392780 -55761102 + MLT1H LTR MaLR 453 549 0 251 227 91 15 chr20 16393555 16393621 -55760261 - L2 LINE L2 -4 3268 3198 1103 212 71 67 chr20 16393637 16394103 -55759779 + LTR37B LTR ERV1 1 468 0 2556 69 7 0 chr20 16394238 16394542 -55759340 - AluSx SINE Alu -6 306 1 584 240 36 53 chr20 16395017 16395242 -55758640 - LTR33 LTR ERVL 0 521 301 652 255 14 0 chr20 16395268 16395413 -55758469 - LTR33 LTR ERVL -361 160 14 243 265 112 0 chr20 16395463 16395561 -55758321 - MIR SINE MIR -43 219 111 1682 119 0 9 chr20 16396083 16396310 -55757572 - AluSq SINE Alu -88 225 1 190 180 100 20 chr20 16396414 16396464 -55757418 + MIR SINE MIR 91 144 -118 236 167 0 36 chr20 16396719 16396774 -55757108 - MIR SINE MIR -99 163 113 2334 118 0 0 chr20 16397124 16397429 -55756453 - AluSx SINE Alu -7 305 1 280 274 27 0 chr20 16397749 16397822 -55756060 + MER91A DNA MER1_type 8 82 -114 237 329 77 19 chr20 16397921 16398076 -55755806 + L2 LINE L2 2945 3108 -164 719 299 34 24 chr20 16398299 16398627 -55755255 + L2 LINE L2 2982 3312 -1 214 269 0 23 chr20 16399185 16399285 -55754597 + (TA)n Simple_repeat Simple_repeat 1 98 -73 1954 107 13 63 chr20 16399285 16399607 -55754275 - AluSx SINE Alu 0 307 1 214 269 0 23 chr20 16399607 16399680 -55754202 + (TA)n Simple_repeat Simple_repeat 98 171 0 696 236 34 0 chr20 16399814 16399992 -55753890 + MER5A DNA MER1_type 6 189 0 2247 101 0 17 chr20 16400776 16401074 -55752808 - AluSx SINE Alu -19 293 1 373 311 74 16 chr20 16402765 16402887 -55750995 - L2 LINE L2 0 3272 3144 429 223 16 33 chr20 16402900 16403021 -55750861 + MER5B DNA MER1_type 54 172 -6 558 29 0 0 chr20 16403704 16403772 -55750110 + (CAAAA)n Simple_repeat Simple_repeat 3 70 0 378 0 0 0 chr20 16405983 16406025 -55747857 + (CA)n Simple_repeat Simple_repeat 2 43 0 2207 99 17 3 chr20 16406294 16406588 -55747294 - AluSq SINE Alu -14 299 2 231 292 112 11 chr20 16406844 16406933 -55746949 + MIR SINE MIR 47 144 -64 2255 99 3 20 chr20 16407255 16407557 -55746325 - AluSx SINE Alu -15 297 1 210 111 89 0 chr20 16407815 16407860 -55746022 + (AAATG)n Simple_repeat Simple_repeat 4 52 0 920 245 71 41 chr20 16407970 16408264 -55745618 + MLT1E LTR MaLR 1 303 -290 726 196 0 77 chr20 16408257 16408425 -55745457 + MLT1E LTR MaLR 439 593 0 * 272 88 0 0 chr20 16410183 16410217 -55743665 + MLT1I LTR MaLR 127 160 -249 359 136 51 0 chr20 16410229 16410288 -55743594 + MLT1J1 LTR MaLR 265 326 -120 340 274 21 0 chr20 16410289 16410384 -55743498 - MIR SINE MIR -78 130 34 827 230 94 5 chr20 16410440 16410653 -55743229 + MIR SINE MIR 10 241 -21 1665 317 143 25 chr20 16411225 16412564 -55741318 + L2 LINE L2 586 2082 -1232 188 222 0 0 chr20 16412590 16412635 -55741247 + L2 LINE L2 2304 2348 -966 517 326 180 16 chr20 16412670 16413400 -55740482 + L2 LINE L2 2448 3313 0 1978 218 89 4 chr20 16415828 16416333 -55737549 - L1ME3A LINE L1 -13 6157 5610 599 52 39 0 chr20 16416334 16416411 -55737471 + THE1A LTR MaLR 1 80 -275 5278 74 5 0 chr20 16416416 16417076 -55736806 + THE1A-int LTR MaLR 918 1580 0 904 112 8 0 chr20 16417076 16417201 -55736681 + THE1A LTR MaLR 1 126 -229 2229 110 0 3 chr20 16417323 16417615 -55736267 + AluSc SINE Alu 4 294 -15 279 311 95 20 chr20 16418042 16418190 -55735692 - MIR SINE MIR -79 183 25 233 180 10 56 chr20 16418191 16418266 -55735616 + MLT1I LTR MaLR 104 149 -260 233 274 0 0 chr20 16418565 16418627 -55735255 - MER5A DNA MER1_type 0 189 128 5590 128 21 9 chr20 16418630 16419569 -55734313 + L1PB4 LINE L1 5215 6152 -4 358 270 20 10 chr20 16419583 16419683 -55734199 - MER5A DNA MER1_type -80 109 9 2385 93 3 0 chr20 16419928 16420228 -55733654 - AluSp SINE Alu -11 302 2 1688 225 101 17 chr20 16420843 16421392 -55732490 + L1ME1 LINE L1 5582 6334 0 767 234 64 0 chr20 16422417 16422605 -55731277 - LTR16C LTR ERVL -3 488 289 237 65 0 0 chr20 16422767 16422798 -55731084 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 362 341 41 52 chr20 16423043 16423410 -55730472 + L3b LINE CR1 1114 1476 -107 1998 241 33 10 chr20 16423855 16424374 -55729508 + L1ME2 LINE L1 5634 6164 0 333 217 9 19 chr20 16424387 16424493 -55729389 + GA-rich Low_complexity Low_complexity 4 108 0 513 313 102 31 chr20 16424761 16425240 -55728642 + HAL1 LINE L1 1214 1726 -781 2318 99 0 26 chr20 16425270 16425583 -55728299 + AluSx SINE Alu 1 305 -7 2520 63 0 0 chr20 16425735 16426036 -55727846 + AluY SINE Alu 1 301 -10 2314 97 0 0 chr20 16426040 16426329 -55727553 + AluY SINE Alu 1 289 -22 330 279 50 19 chr20 16426348 16426509 -55727373 + L1M4 LINE L1 2247 2412 -3734 1433 240 88 49 chr20 16426592 16427104 -55726778 + MLT1H LTR MaLR 18 549 0 229 151 38 0 chr20 16428065 16428118 -55725764 + (TA)n Simple_repeat Simple_repeat 1 55 0 720 196 65 54 chr20 16428278 16428390 -55725492 + MIR SINE MIR 77 193 -69 2603 47 0 25 chr20 16428390 16428709 -55725173 + AluY SINE Alu 1 311 0 720 196 65 54 chr20 16428709 16428780 -55725102 + MIR SINE MIR 193 262 0 581 207 58 29 chr20 16430042 16430216 -55723666 + MIR SINE MIR 82 260 -2 2200 73 22 0 chr20 16430322 16430660 -55723222 - AluSx SINE Alu 0 346 3 204 67 0 0 chr20 16431716 16431746 -55722136 + (CAG)n Simple_repeat Simple_repeat 2 31 0 29 0 0 0 chr20 16431791 16431820 -55722062 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr20 16431899 16431951 -55721931 + GC_rich Low_complexity Low_complexity 1 52 0 234 62 0 0 chr20 16431958 16431990 -55721892 + (CCG)n Simple_repeat Simple_repeat 3 34 0 591 40 0 0 chr20 16432256 16432330 -55721552 + (GGA)n Simple_repeat Simple_repeat 1 74 0 1993 134 6 34 chr20 16435254 16435575 -55718307 - AluSx SINE Alu 0 312 1 240 301 115 39 chr20 16435592 16435748 -55718134 + MLT1J2 LTR MaLR 267 434 -16 671 214 62 45 chr20 16436177 16436401 -55717481 - L1MC5 LINE L1 -33 7928 7701 872 231 183 53 chr20 16436515 16436909 -55716973 + MLT1J2 LTR MaLR 1 445 -5 818 244 52 5 chr20 16436931 16437144 -55716738 - MER58A DNA MER1_type -1 223 1 211 156 78 111 chr20 16437224 16437314 -55716568 + MIR SINE MIR 101 187 -75 263 224 282 0 chr20 16437388 16437473 -55716409 + L2 LINE L2 3204 3312 -1 485 253 73 27 chr20 16438258 16438408 -55715474 - MIR3 SINE MIR -29 179 23 589 214 213 0 chr20 16438426 16438660 -55715222 - L1ME3A LINE L1 -1 6163 5876 623 211 207 160 chr20 16438744 16438979 -55714903 + MLT1H LTR MaLR 1 223 -326 396 0 0 0 chr20 16438979 16439023 -55714859 + (TG)n Simple_repeat Simple_repeat 1 44 0 623 211 207 160 chr20 16439023 16439294 -55714588 + MLT1H LTR MaLR 223 531 -18 1296 242 31 50 chr20 16439313 16439789 -55714093 - L1MC4 LINE L1 -184 7858 7392 418 290 62 56 chr20 16441099 16441261 -55712621 - MLT1J2 LTR MaLR 0 450 288 394 238 186 35 chr20 16441287 16441459 -55712423 - MLT1J2 LTR MaLR -221 229 32 314 284 0 20 chr20 16441567 16441669 -55712213 - MER58 DNA MER1_type -3 2417 2318 405 203 0 0 chr20 16441682 16441756 -55712126 - MER58 DNA MER1_type -2322 98 25 29 47 0 0 chr20 16442746 16442789 -55711093 + AT_rich Low_complexity Low_complexity 1 43 0 288 0 0 0 chr20 16442894 16442926 -55710956 + (CA)n Simple_repeat Simple_repeat 2 33 0 306 212 71 20 chr20 16443040 16443139 -55710743 - L1ME3A LINE L1 -275 5846 5743 1714 236 49 25 chr20 16443193 16443680 -55710202 + L1ME3 LINE L1 5657 6155 -7 260 209 38 48 chr20 16444241 16444346 -55709536 - MLT1J2 LTR MaLR -22 428 325 1444 255 134 16 chr20 16444595 16445086 -55708796 - MLT1H LTR MaLR 0 549 1 1627 163 140 93 chr20 16445684 16446176 -55707706 + MLT2B2 LTR ERVL 1 515 0 410 247 174 64 chr20 16446176 16446395 -55707487 + MLT1H LTR MaLR 133 375 -174 233 111 28 0 chr20 16446401 16446437 -55707445 + MLT1H LTR MaLR 538 574 -16 648 283 95 43 chr20 16446676 16447022 -55706860 + MLT1J2 LTR MaLR 23 386 -64 23 33 0 0 chr20 16447022 16447052 -55706830 + AT_rich Low_complexity Low_complexity 1 30 0 306 190 38 13 chr20 16447052 16447131 -55706751 + MLT1J2 LTR MaLR 368 448 -2 558 278 112 14 chr20 16447482 16447759 -55706123 + LTR16C LTR ERVL 88 391 -100 1449 220 8 47 chr20 16447793 16448152 -55705730 + MLT1A1 LTR MaLR 21 365 0 373 302 133 19 chr20 16448159 16448472 -55705410 - L2 LINE L2 -261 3052 2697 1107 98 0 0 chr20 16448847 16448990 -55704892 + AluSg/x SINE Alu 145 287 -25 222 91 0 0 chr20 16448990 16449023 -55704859 + (TA)n Simple_repeat Simple_repeat 1 33 0 21 57 0 0 chr20 16449946 16449981 -55703901 + AT_rich Low_complexity Low_complexity 1 35 0 504 234 85 7 chr20 16450241 16450382 -55703500 + MIR SINE MIR 108 259 -3 196 295 0 49 chr20 16450383 16450444 -55703438 + L2 LINE L2 3205 3262 -10 2187 155 0 54 chr20 16450545 16450971 -55702911 + MER57A LTR ERV1 1 403 0 1516 221 62 26 chr20 16451004 16451424 -55702458 - MER63B DNA MER1_type -1 435 1 2301 84 0 3 chr20 16451491 16451788 -55702094 + AluSg SINE Alu 2 297 -13 481 319 50 21 chr20 16452117 16452396 -55701486 + L2 LINE L2 2456 2742 -572 227 354 59 29 chr20 16452492 16452701 -55701181 + MIR SINE MIR 31 261 -1 270 160 0 0 chr20 16452843 16452893 -55700989 + T-rich Low_complexity Low_complexity 2 51 0 198 260 55 41 chr20 16454023 16454096 -55699786 + L2 LINE L2 3170 3243 -70 237 145 48 0 chr20 16454132 16454194 -55699688 + GA-rich Low_complexity Low_complexity 1 65 0 1692 187 11 0 chr20 16454340 16454782 -55699100 + AluJo SINE Alu 1 445 0 473 86 14 0 chr20 16454922 16454992 -55698890 + L1MB1 LINE L1 6082 6152 -37 1571 194 19 16 chr20 16454992 16455307 -55698575 + MLT1A1 LTR MaLR 1 316 -49 737 213 72 0 chr20 16456758 16456965 -55696917 - Charlie5 DNA MER1_type -54 2558 2337 278 237 0 0 chr20 16456960 16457019 -55696863 - Charlie5 DNA MER1_type -2553 59 1 * 303 250 107 0 chr20 16457042 16457126 -55696756 - L2 LINE L2 -299 3014 2922 1164 292 58 7 chr20 16457815 16458247 -55695635 - LTR16C LTR ERVL 0 491 38 359 62 0 0 chr20 16458359 16458407 -55695475 - MADE1 DNA Mariner 0 80 33 257 345 69 52 chr20 16458620 16458736 -55695146 + MLT1K LTR MaLR 111 228 -360 438 20 0 0 chr20 16458948 16458999 -55694883 + (CA)n Simple_repeat Simple_repeat 2 52 0 230 325 13 0 chr20 16459554 16459631 -55694251 + LTR67 LTR ERVL 97 174 -383 * 777 288 26 76 chr20 16459571 16459994 -55693888 + MLT1J LTR MaLR 110 511 0 1338 206 69 33 chr20 16460221 16460643 -55693239 - L1MCc LINE L1 -3947 2994 2558 1034 176 33 107 chr20 16460689 16460961 -55692921 + AluJo SINE Alu 1 252 -60 209 108 0 27 chr20 16460967 16461004 -55692878 + (TG)n Simple_repeat Simple_repeat 1 36 0 1365 194 32 25 chr20 16461004 16461288 -55692594 - AluJo SINE Alu -26 286 1 741 195 63 20 chr20 16461291 16461500 -55692382 - L1MCc LINE L1 -4541 2400 2207 751 148 20 10 chr20 16461502 16461636 -55692246 - MSTD LTR MaLR -8 388 249 6830 157 16 20 chr20 16461655 16463250 -55690632 - L1MA5 LINE L1 -6 6294 4693 5402 129 11 5 chr20 16463250 16464353 -55689529 - L1PA16 LINE L1 -15 6151 5026 2801 128 14 0 chr20 16464353 16464781 -55689101 - MER57B LTR ERV1 0 434 1 6830 157 16 20 chr20 16464781 16465441 -55688441 - L1MA5 LINE L1 -1605 4695 4039 299 205 73 130 chr20 16465443 16465669 -55688213 - MLT1A2 LTR MaLR -120 276 1 3186 216 62 58 chr20 16465669 16465785 -55688097 - L1MCc LINE L1 -4847 2094 1980 2246 86 48 0 chr20 16465785 16466075 -55687807 - AluSc SINE Alu -5 304 1 3186 216 62 58 chr20 16466075 16467724 -55686158 - L1MCc LINE L1 -4961 1980 1 343 305 120 12 chr20 16468345 16468512 -55685370 - L1MC/D LINE L1 -793 5449 5265 282 125 39 173 chr20 16468625 16468729 -55685153 - MLT1F LTR MaLR -39 503 414 229 192 0 19 chr20 16468861 16468913 -55684969 - MLT1H LTR MaLR -392 157 107 496 261 9 17 chr20 16469326 16469441 -55684441 + L2 LINE L2 3197 3310 -3 2414 94 0 0 chr20 16469485 16469793 -55684089 - AluY SINE Alu -1 310 3 1256 269 102 44 chr20 16470105 16470607 -55683275 - MLT1H LTR MaLR 0 549 19 256 307 129 0 chr20 16470774 16470875 -55683007 - L2 LINE L2 -1 3312 3199 231 340 20 20 chr20 16471299 16471399 -55682483 - L2 LINE L2 -241 3031 2932 533 318 77 5 chr20 16471648 16471868 -55682014 - MIR SINE MIR -15 247 12 1018 285 82 5 chr20 16472098 16472474 -55681408 - LTR16C LTR ERVL -2 489 85 330 26 0 0 chr20 16474102 16474141 -55679741 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 51 0 0 chr20 16474303 16474342 -55679540 + AT_rich Low_complexity Low_complexity 1 39 0 6161 137 40 17 chr20 16474474 16475468 -55678414 - L1MA5A LINE L1 -3 6294 5325 183 42 0 0 chr20 16475468 16475492 -55678390 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6161 137 40 17 chr20 16475492 16476277 -55677605 - L1MA5A LINE L1 -972 5325 4478 2256 117 0 3 chr20 16476277 16476585 -55677297 - AluSx SINE Alu -5 307 1 6161 137 40 17 chr20 16476585 16476840 -55677042 - L1MA5A LINE L1 -1819 4478 4230 2850 152 86 2 chr20 16476842 16477387 -55676495 + L1MA5A LINE L1 3652 4242 -1904 1137 280 129 20 chr20 16477378 16478029 -55675853 - L1MEd LINE L1 -5035 1084 363 * 618 271 102 0 chr20 16478115 16478340 -55675542 - L1MEd LINE L1 -5870 249 2 2269 138 28 0 chr20 16478392 16478746 -55675136 - THE1B LTR MaLR 0 364 1 1891 158 3 7 chr20 16478829 16479127 -55674755 - AluJb SINE Alu -15 297 1 370 197 14 0 chr20 16480507 16480578 -55673304 + MLT1J2 LTR MaLR 252 323 -127 657 302 60 13 chr20 16480648 16480946 -55672936 - HAL1 LINE L1 -689 1818 1507 301 268 73 16 chr20 16481061 16481184 -55672698 + L1ME LINE L1 5436 5565 -556 305 301 65 55 chr20 16481403 16481821 -55672061 - HAL1 LINE L1 -1259 1248 827 711 193 67 40 chr20 16483627 16483850 -55670032 + L1MC5 LINE L1 7695 7923 -38 487 276 138 64 chr20 16483899 16484155 -55669727 + LTR16A LTR ERVL 95 382 -68 1034 196 77 0 chr20 16484155 16484349 -55669533 + MER63A DNA MER1_type 1 209 -1 487 276 138 64 chr20 16484349 16484418 -55669464 + LTR16A LTR ERVL 382 444 -6 27 29 0 0 chr20 16484437 16484471 -55669411 + AT_rich Low_complexity Low_complexity 1 34 0 273 128 0 0 chr20 16484551 16484598 -55669284 + (CA)n Simple_repeat Simple_repeat 1 47 0 2261 105 3 9 chr20 16485060 16485375 -55668507 + AluSp SINE Alu 1 313 0 440 271 36 29 chr20 16485668 16485808 -55668074 - MER5A DNA MER1_type -5 184 44 201 237 0 0 chr20 16486061 16486099 -55667783 + (TG)n Simple_repeat Simple_repeat 1 38 0 205 273 30 45 chr20 16487451 16487517 -55666365 + MER5A DNA MER1_type 41 105 -84 198 0 0 0 chr20 16488421 16488443 -55665439 + (TG)n Simple_repeat Simple_repeat 2 23 0 1762 28 0 14 chr20 16489425 16489642 -55664240 + L1PA4 LINE L1 5942 6155 0 204 327 14 13 chr20 16489651 16489752 -55664130 + MIR SINE MIR 54 157 -59 253 292 28 0 chr20 16489780 16489852 -55664030 + L3b LINE CR1 1389 1462 -121 25 0 0 0 chr20 16589922 16589947 -55563935 + AT_rich Low_complexity Low_complexity 1 25 0 1745 180 7 0 chr20 16589953 16590272 -55563610 + AluJb SINE Alu 1 321 0 1251 175 24 0 chr20 16590625 16590871 -55563011 - L1MB2 LINE L1 -7 6164 5913 280 77 39 19 chr20 16591261 16591313 -55562569 + CT-rich Low_complexity Low_complexity 3 55 0 379 255 78 161 chr20 16592250 16592611 -55561271 - L2 LINE L2 -13 3259 2929 444 264 244 0 chr20 16595014 16595211 -55558671 - MIR SINE MIR -12 250 6 417 218 71 101 chr20 16595739 16596090 -55557792 - MLT1H1 LTR MaLR -6 549 123 771 181 17 6 chr20 16596210 16596387 -55557495 + L1MA8 LINE L1 6109 6287 -4 1787 242 50 14 chr20 16596533 16597017 -55556865 - MLT1D LTR MaLR -2 503 3 1838 210 73 21 chr20 16597022 16597502 -55556380 - MLT1D LTR MaLR 0 505 1 2525 28 0 0 chr20 16597647 16597958 -55555924 + AluYa5 SINE Alu 1 311 0 543 327 71 4 chr20 16600338 16600564 -55553318 + MIR SINE MIR 7 247 -15 347 216 43 35 chr20 16600614 16600730 -55553152 - L1ME4a LINE L1 -65 6056 5940 373 296 81 31 chr20 16601138 16601642 -55552240 - L1MC4a LINE L1 -446 5675 5512 23 0 0 0 chr20 16601779 16601802 -55552080 + AT_rich Low_complexity Low_complexity 1 23 0 200 176 39 0 chr20 16601992 16602043 -55551839 + (TA)n Simple_repeat Simple_repeat 1 53 0 243 299 179 0 chr20 16602102 16602219 -55551663 - L2 LINE L2 0 3313 3176 6940 53 7 0 chr20 16602842 16603743 -55550139 + L1PA7 LINE L1 5233 6139 -15 633 350 62 0 chr20 16603867 16604093 -55549789 + MIR SINE MIR 1 240 -22 4448 187 18 31 chr20 16604239 16604826 -55549056 - L1MB5 LINE L1 -31 6143 5550 1586 183 11 14 chr20 16604826 16605142 -55548740 - AluJb SINE Alu 0 320 6 4448 187 18 31 chr20 16605142 16606041 -55547841 - L1MB5 LINE L1 -624 5550 4675 2371 92 0 10 chr20 16606182 16606496 -55547386 - AluY SINE Alu 0 311 1 22 0 0 0 chr20 16606504 16606526 -55547356 + AT_rich Low_complexity Low_complexity 1 22 0 499 283 14 35 chr20 16606683 16606895 -55546987 - MIR SINE MIR -41 221 16 26 30 0 0 chr20 16607225 16607258 -55546624 + AT_rich Low_complexity Low_complexity 1 33 0 2082 164 68 17 chr20 16608601 16609084 -55544798 - Charlie1b DNA MER1_type -6 517 10 393 86 0 0 chr20 16609675 16609733 -55544149 + (TG)n Simple_repeat Simple_repeat 1 58 0 545 299 110 50 chr20 16610095 16611140 -55542742 - L1MEd LINE L1 -4548 1581 465 335 333 53 67 chr20 16611193 16611418 -55542464 - L1MEd LINE L1 -5896 223 2 21 0 0 0 chr20 16612020 16612041 -55541841 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr20 16613150 16613173 -55540709 + (TC)n Simple_repeat Simple_repeat 2 24 0 1872 149 0 14 chr20 16613174 16613456 -55540426 - AluJb SINE Alu -26 286 9 608 278 90 0 chr20 16613932 16614155 -55539727 + MIR SINE MIR 20 262 0 1062 261 159 6 chr20 16614818 16615163 -55538719 + LTR16C LTR ERVL 84 481 -10 2153 307 93 13 chr20 16615211 16616172 -55537710 + L2 LINE L2 2023 3075 -238 463 309 66 7 chr20 16616350 16616502 -55537380 - MIR SINE MIR -99 163 3 180 306 48 0 chr20 16618120 16618182 -55535700 - L2 LINE L2 -9 3263 3199 338 193 140 35 chr20 16618356 16618470 -55535412 + MLT1H LTR MaLR 29 154 -395 235 167 206 78 chr20 16618598 16618700 -55535182 + MLT1H LTR MaLR 434 548 -1 207 362 24 31 chr20 16618932 16619059 -55534823 - L2 LINE L2 -472 2842 2717 359 102 0 0 chr20 16619307 16619356 -55534526 - Alu SINE Alu -11 291 243 2149 112 6 3 chr20 16619428 16619740 -55534142 - AluSq SINE Alu 0 313 1 2114 121 0 0 chr20 16619864 16620170 -55533712 + AluSc SINE Alu 4 309 0 310 100 33 0 chr20 16621190 16621250 -55532632 + CT-rich Low_complexity Low_complexity 3 64 0 2357 86 3 0 chr20 16621470 16621761 -55532121 - AluSc SINE Alu -17 292 1 185 293 63 63 chr20 16621845 16622050 -55531832 - MER5C DNA MER1_type -94 230 26 2417 89 0 0 chr20 16622391 16622695 -55531187 - AluSg SINE Alu -1 309 6 195 100 0 0 chr20 16622717 16622747 -55531135 + (TG)n Simple_repeat Simple_repeat 2 31 0 25 31 0 0 chr20 16623671 16623703 -55530179 + AT_rich Low_complexity Low_complexity 1 32 0 2616 102 16 8 chr20 16625341 16625713 -55528169 + THE1C LTR MaLR 1 375 0 356 266 103 101 chr20 16625950 16626395 -55527487 - L2 LINE L2 -237 3035 2591 423 263 31 56 chr20 16627291 16627451 -55526431 + MIR SINE MIR 29 184 -78 204 278 0 0 chr20 16627555 16627609 -55526273 + (CA)n Simple_repeat Simple_repeat 1 54 0 23 0 0 0 chr20 16630703 16630726 -55523156 + AT_rich Low_complexity Low_complexity 1 23 0 218 175 0 0 chr20 16631293 16631333 -55522549 + (TG)n Simple_repeat Simple_repeat 1 40 0 2262 94 0 7 chr20 16631795 16632104 -55521778 + AluSg SINE Alu 1 307 -3 934 249 14 0 chr20 16632246 16632463 -55521419 + MER58A DNA MER1_type 1 220 -4 534 336 76 0 chr20 16632555 16632778 -55521104 - MIR SINE MIR -21 241 2 2170 122 0 0 chr20 16634384 16634679 -55519203 - AluSc SINE Alu -14 295 1 220 186 34 0 chr20 16634776 16634835 -55519047 + GA-rich Low_complexity Low_complexity 2 62 0 28 29 0 0 chr20 16635349 16635384 -55518498 + AT_rich Low_complexity Low_complexity 1 35 0 675 264 46 32 chr20 16635457 16635737 -55518145 + L1MA9 LINE L1 5992 6275 -37 391 218 188 15 chr20 16635755 16635888 -55517994 + MLT1A2 LTR MaLR 155 310 -64 895 207 152 13 chr20 16636130 16636367 -55517515 - LTR16C LTR ERVL 0 491 222 2181 113 0 3 chr20 16636685 16636978 -55516904 + AluSx SINE Alu 1 292 -20 21 36 0 0 chr20 16636979 16637007 -55516875 + AT_rich Low_complexity Low_complexity 1 28 0 432 241 124 51 chr20 16637007 16637144 -55516738 - FRAM SINE Alu -19 147 1 278 291 13 25 chr20 16637167 16637246 -55516636 - MIR3 SINE MIR -120 88 11 357 250 28 28 chr20 16637497 16637683 -55516199 + L1ME3A LINE L1 5683 5873 -297 2118 130 0 0 chr20 16637685 16637977 -55515905 + AluSq SINE Alu 1 292 -21 1074 144 0 0 chr20 16637979 16638159 -55515723 + (TA)n Simple_repeat Simple_repeat 1 180 0 957 188 39 19 chr20 16638692 16638900 -55514982 + MIR SINE MIR 19 230 -32 324 0 0 0 chr20 16640154 16640190 -55513692 + (CA)n Simple_repeat Simple_repeat 2 37 0 184 121 96 0 chr20 16641887 16641970 -55511912 + (TTAAA)n Simple_repeat Simple_repeat 4 94 0 422 268 107 39 chr20 16642033 16642238 -55511644 - L2 LINE L2 -62 3251 3033 569 286 155 5 chr20 16642243 16642456 -55511426 - MIR SINE MIR -5 257 13 180 211 0 105 chr20 16642547 16642604 -55511278 + MIR SINE MIR 57 107 -155 297 333 0 18 chr20 16642627 16642741 -55511141 + L2 LINE L2 3201 3312 -1 282 29 0 0 chr20 16644509 16644544 -55509338 + (TCTA)n Simple_repeat Simple_repeat 1 35 0 1516 211 49 59 chr20 16644779 16645181 -55508701 - MLT1F1 LTR MaLR 0 567 209 1272 234 130 37 chr20 16645181 16645643 -55508239 + MLT1D LTR MaLR 1 505 0 1516 211 49 59 chr20 16645643 16645845 -55508037 - MLT1F1 LTR MaLR -358 209 6 406 342 87 6 chr20 16646276 16646437 -55507445 + MIR3 SINE MIR 16 189 -19 355 312 30 40 chr20 16646579 16646778 -55507104 + L2 LINE L2 3117 3313 0 412 367 20 15 chr20 16648144 16648343 -55505539 - L2 LINE L2 0 3313 3114 783 175 181 0 chr20 16648463 16648623 -55505259 - MER5A DNA MER1_type 0 189 1 2137 110 3 13 chr20 16649496 16649805 -55504077 + AluSx SINE Alu 1 306 -6 907 217 44 0 chr20 16649823 16650003 -55503879 - MER58A DNA MER1_type 0 224 37 724 255 214 25 chr20 16651253 16651727 -55502155 - L2 LINE L2 0 3313 2772 2054 148 33 9 chr20 16653923 16654186 -55499696 - MER7A DNA MER2_type -2692 346 74 2137 140 20 8 chr20 16654186 16654543 -55499339 + MER46B DNA MER2_type 1 236 0 2054 148 33 9 chr20 16654543 16654616 -55499266 - MER7A DNA MER2_type -2964 74 4 291 130 29 14 chr20 16655518 16655587 -55498295 + (TA)n Simple_repeat Simple_repeat 2 71 0 22 0 0 0 chr20 16656042 16656064 -55497818 + GC_rich Low_complexity Low_complexity 1 22 0 728 257 45 20 chr20 16656102 16656304 -55497578 + MER63A DNA MER1_type 2 208 -2 192 77 0 0 chr20 16656977 16657003 -55496879 + (TTA)n Simple_repeat Simple_repeat 2 27 0 206 322 0 56 chr20 16657344 16657434 -55496448 + MIR SINE MIR 146 230 -32 2451 84 3 0 chr20 16657534 16657842 -55496040 + AluSp SINE Alu 1 309 -4 393 276 96 52 chr20 16657876 16658220 -55495662 + L1MC4a LINE L1 5606 5964 -157 272 180 34 11 chr20 16658224 16658313 -55495569 + (TA)n Simple_repeat Simple_repeat 2 92 0 259 255 193 55 chr20 16658733 16658878 -55495004 - MIR SINE MIR -87 175 11 2414 243 96 17 chr20 16658966 16659769 -55494113 - L1ME2 LINE L1 -16 6082 5217 453 267 30 55 chr20 16659775 16660186 -55493696 - L1ME2 LINE L1 -5150 920 530 475 324 56 59 chr20 16660451 16660859 -55493023 - L1ME2 LINE L1 -5617 453 47 361 334 46 66 chr20 16661095 16661520 -55492362 + L2 LINE L2 2661 3105 -167 1137 306 63 5 chr20 16662312 16662737 -55491145 + MLT1J2 LTR MaLR 1 450 0 12909 89 5 11 chr20 16663795 16665656 -55488226 - L1P LINE L1 -2807 3339 1490 387 254 99 49 chr20 16666162 16666304 -55487578 + MIR SINE MIR 110 258 -4 227 288 89 89 chr20 16666695 16666767 -55487115 - MIR SINE MIR -50 212 141 2399 97 0 3 chr20 16666767 16667076 -55486806 - AluSq SINE Alu -5 308 1 227 288 89 89 chr20 16667076 16667194 -55486688 - MIR SINE MIR -120 142 22 * 251 388 14 14 chr20 16667192 16667339 -55486543 + MER5A DNA MER1_type 38 184 -5 370 262 23 45 chr20 16667705 16667953 -55485929 + Charlie7 DNA MER1_type 21 2610 -2 511 206 57 43 chr20 16667993 16668134 -55485748 + MIR SINE MIR 110 252 -10 2033 252 85 6 chr20 16668136 16668628 -55485254 + MLT1H LTR MaLR 1 531 -18 183 42 0 0 chr20 16668632 16668656 -55485226 + (CAT)n Simple_repeat Simple_repeat 3 26 0 260 238 32 0 chr20 16669536 16669599 -55484283 + MLT1L LTR MaLR 1 65 -550 26 0 0 0 chr20 16669766 16669792 -55484090 + AT_rich Low_complexity Low_complexity 1 26 0 1752 148 28 28 chr20 16672545 16672835 -55481047 - AluJo SINE Alu -18 294 5 218 323 97 32 chr20 16675492 16675585 -55478297 - L2 LINE L2 0 3272 3174 414 332 86 5 chr20 16675794 16675981 -55477901 + MIR SINE MIR 20 221 -41 378 200 0 78 chr20 16676989 16677104 -55476778 - L1MC4 LINE L1 -2 8040 7935 363 44 0 0 chr20 16677148 16677193 -55476689 + (TG)n Simple_repeat Simple_repeat 2 46 0 6111 120 19 7 chr20 16677233 16678559 -55475323 - L1PA13 LINE L1 -20 6143 4804 315 227 93 0 chr20 16678565 16678662 -55475220 - L1MC4 LINE L1 -279 7763 7658 5333 138 8 13 chr20 16679045 16680166 -55473716 + L1PA16 LINE L1 5037 6153 -13 23 54 0 0 chr20 16680905 16680942 -55472940 + AT_rich Low_complexity Low_complexity 1 37 0 312 259 63 21 chr20 16681411 16681554 -55472328 - L1ME4a LINE L1 -2 6119 5971 846 234 11 5 chr20 16681585 16681769 -55472113 + MER5A DNA MER1_type 4 188 -1 21 0 0 0 chr20 16681769 16681790 -55472092 + AT_rich Low_complexity Low_complexity 1 21 0 1753 146 7 4 chr20 16681800 16682106 -55471776 + AluSx SINE Alu 1 307 0 315 307 44 44 chr20 16684380 16684517 -55469365 + MIR3 SINE MIR 72 208 0 205 285 21 111 chr20 16684570 16684714 -55469168 + MIR SINE MIR 16 146 -62 365 81 16 0 chr20 16685331 16685393 -55468489 + (CA)n Simple_repeat Simple_repeat 2 64 0 2199 111 3 0 chr20 16686151 16686448 -55467434 - AluSx SINE Alu -14 298 1 21 0 0 0 chr20 16686584 16686605 -55467277 + AT_rich Low_complexity Low_complexity 1 21 0 193 200 0 0 chr20 16686605 16686640 -55467242 - MIR SINE MIR -27 235 201 856 281 65 8 chr20 16686650 16686978 -55466904 - LTR16C LTR ERVL -14 477 79 1652 159 0 18 chr20 16687057 16687195 -55466687 + AluJo SINE Alu 1 133 -179 2521 60 0 0 chr20 16687195 16687496 -55466386 + AluY SINE Alu 1 301 -10 1652 159 0 18 chr20 16687496 16687633 -55466249 + AluJo SINE Alu 133 271 -41 366 304 72 29 chr20 16687648 16687786 -55466096 - MIR SINE MIR -117 145 2 366 279 132 0 chr20 16689498 16689634 -55464248 - MER103 DNA DNA -11 155 2 312 302 112 12 chr20 16691882 16692051 -55461831 + L1MC4a LINE L1 5762 5947 -1861 32 109 0 0 chr20 16694600 16694737 -55459145 + AT_rich Low_complexity Low_complexity 1 137 0 292 302 116 0 chr20 16696657 16696786 -55457096 - MIR SINE MIR -13 249 106 211 274 0 0 chr20 16696806 16696857 -55457025 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 333 225 45 22 chr20 16696857 16696946 -55456936 - L2 LINE L2 0 3313 3223 28 29 0 0 chr20 16697688 16697723 -55456159 + AT_rich Low_complexity Low_complexity 1 35 0 15538 129 12 5 chr20 16697731 16700110 -55453772 + Tigger1 DNA MER2_type 23 2418 0 196 289 79 40 chr20 16700198 16700274 -55453608 + L2 LINE L2 3138 3216 -56 1434 249 56 7 chr20 16700276 16700722 -55453160 + Charlie4a DNA MER1_type 40 507 -1 740 232 59 72 chr20 16701686 16701740 -55452142 - MIR SINE MIR -21 241 188 2200 112 0 7 chr20 16701740 16702044 -55451838 - AluSc SINE Alu -7 302 1 740 232 59 72 chr20 16702044 16702226 -55451656 - MIR SINE MIR -74 188 8 222 299 13 13 chr20 16704284 16704361 -55449521 + GA-rich Low_complexity Low_complexity 2 78 0 233 408 125 0 chr20 16706331 16706483 -55447399 - L2 LINE L2 -4 3268 3098 1381 229 107 36 chr20 16707337 16707804 -55446078 + MLT1D LTR MaLR 5 504 -1 22 35 0 0 chr20 16708426 16708455 -55445427 + AT_rich Low_complexity Low_complexity 1 29 0 1422 152 166 73 chr20 16708873 16708915 -55444967 - LTR54B LTR ERV1 -2 496 459 2411 65 3 16 chr20 16708915 16709224 -55444658 - AluY SINE Alu -6 305 1 1422 152 166 73 chr20 16709224 16709634 -55444248 - LTR54B LTR ERV1 -39 459 2 32 26 0 0 chr20 16709640 16709679 -55444203 + AT_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr20 16709799 16709820 -55444062 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 23 0 0 0 chr20 16709960 16709983 -55443899 + AT_rich Low_complexity Low_complexity 1 23 0 551 309 63 16 chr20 16710530 16710709 -55443173 + MIR SINE MIR 2 192 -70 429 20 0 0 chr20 16710709 16710759 -55443123 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 551 309 63 16 chr20 16710759 16710770 -55443112 + MIR SINE MIR 192 201 -61 215 31 31 0 chr20 16711533 16711565 -55442317 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 340 101 0 chr20 16711738 16711897 -55441985 + L3b LINE CR1 1114 1288 -295 421 275 170 70 chr20 16711936 16712489 -55441393 + L2 LINE L2 2139 2746 -568 208 316 46 139 chr20 16712512 16712965 -55440917 + L2 LINE L2 2862 3272 0 1100 341 22 17 chr20 16713114 16713530 -55440352 - LTR16A LTR ERVL -15 435 18 1080 336 42 40 chr20 16713655 16714555 -55439327 - ERVL LTR ERVL -90 5359 4511 2051 141 0 10 chr20 16714589 16714895 -55438987 + AluSg SINE Alu 1 303 -7 1510 309 97 26 chr20 16714990 16715361 -55438521 - ERVL LTR ERVL -1360 4294 3951 2225 115 10 0 chr20 16715361 16715665 -55438217 - AluSq SINE Alu -6 307 1 1510 309 97 26 chr20 16715665 16716870 -55437012 - ERVL LTR ERVL -1703 3951 2484 1314 305 69 9 chr20 16716938 16717404 -55436478 - ERVL LTR ERVL -3614 1382 889 893 291 20 20 chr20 16717536 16717832 -55436050 - LTR16A LTR ERVL -139 311 16 26 93 0 0 chr20 16718589 16718664 -55435218 + AT_rich Low_complexity Low_complexity 1 75 0 246 216 72 62 chr20 16718698 16718795 -55435087 - MIR SINE MIR -92 170 73 643 220 70 21 chr20 16719481 16719667 -55434215 - MIR SINE MIR 0 262 68 978 259 115 15 chr20 16720267 16720607 -55433275 - MLT1I LTR MaLR -3 406 33 577 313 60 18 chr20 16720740 16720957 -55432925 + MLT1I LTR MaLR 168 393 -16 991 129 11 11 chr20 16721136 16721160 -55432722 + CT-rich Low_complexity Low_complexity 1 202 0 991 129 11 11 chr20 16721160 16721338 -55432544 + CT-rich Low_complexity Low_complexity 1 178 0 248 270 153 44 chr20 16721703 16721840 -55432042 - MIR SINE MIR -48 214 63 542 322 135 4 chr20 16722170 16722400 -55431482 - MIR SINE MIR -1 261 2 322 309 0 0 chr20 16722512 16722606 -55431276 - L2 LINE L2 0 3272 3179 186 321 76 23 chr20 16724911 16725042 -55428840 + L2 LINE L2 2598 2735 -579 1178 268 32 60 chr20 16725345 16725808 -55428074 + LTR16A LTR ERVL 1 450 0 295 323 23 31 chr20 16726056 16726186 -55427696 - L2 LINE L2 -1 3312 3184 559 153 123 106 chr20 16726210 16726380 -55427502 - MER5B DNA MER1_type -5 173 1 807 279 18 18 chr20 16726392 16726618 -55427264 - MIR SINE MIR -29 233 8 25 0 0 0 chr20 16726665 16726690 -55427192 + AT_rich Low_complexity Low_complexity 1 25 0 218 188 21 0 chr20 16729076 16729124 -55424758 - L2 LINE L2 -26 3287 3239 180 0 0 0 chr20 16729240 16729260 -55424622 + (A)n Simple_repeat Simple_repeat 1 20 0 723 269 66 51 chr20 16729367 16729624 -55424258 - MIR SINE MIR 0 262 2 625 293 134 69 chr20 16731278 16732147 -55421735 + L2 LINE L2 2374 3301 -12 204 40 0 0 chr20 16732148 16732173 -55421709 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2198 123 0 10 chr20 16732434 16732742 -55421140 - AluSq SINE Alu -8 305 1 224 250 0 0 chr20 16732810 16732862 -55421020 + T-rich Low_complexity Low_complexity 1 52 0 437 360 17 21 chr20 16734288 16734521 -55419361 - MIR SINE MIR -24 238 7 1818 186 101 14 chr20 16735150 16735575 -55418307 + MLT1C LTR MaLR 6 467 0 378 341 88 6 chr20 16736871 16737053 -55416829 + MIR SINE MIR 45 241 -21 181 343 14 14 chr20 16738152 16738225 -55415657 - L2 LINE L2 -5 3267 3195 2179 163 139 16 chr20 16738230 16738731 -55415151 + MER61D LTR ERV1 1 1289 0 1073 166 30 98 chr20 16738988 16739239 -55414643 + ORSL DNA AcHobo 1 231 -44 1531 128 149 10 chr20 16739239 16739535 -55414347 + MER1B DNA MER1_type 1 337 0 1073 166 30 98 chr20 16739535 16739578 -55414304 + ORSL DNA AcHobo 231 275 0 294 282 61 38 chr20 16739655 16739786 -55414096 - MIR SINE MIR -123 139 6 556 296 115 26 chr20 16739984 16740214 -55413668 + MIR SINE MIR 12 262 0 272 208 0 14 chr20 16740316 16740388 -55413494 + (TA)n Simple_repeat Simple_repeat 2 72 0 203 369 0 0 chr20 16740468 16740533 -55413349 - MIR SINE MIR -111 151 87 22 0 0 0 chr20 16741530 16741552 -55412330 + AT_rich Low_complexity Low_complexity 1 22 0 543 261 69 27 chr20 16743857 16744045 -55409837 - MIR SINE MIR -60 202 7 198 0 0 0 chr20 16744278 16744300 -55409582 + (TA)n Simple_repeat Simple_repeat 2 23 0 2334 47 0 17 chr20 16744323 16744622 -55409260 + AluY SINE Alu 1 294 -17 304 312 7 36 chr20 16744965 16745103 -55408779 + L1ME LINE L1 5566 5699 -422 1839 146 23 43 chr20 16745190 16745540 -55408342 + MER61A LTR ERV1 1 343 0 2241 104 0 0 chr20 16745801 16746099 -55407783 - AluSg SINE Alu -10 300 3 22 35 0 0 chr20 16746250 16746279 -55407603 + AT_rich Low_complexity Low_complexity 1 29 0 1292 151 4 27 chr20 16748065 16748290 -55405592 + AluJb SINE Alu 82 301 -11 220 255 0 0 chr20 16748874 16748921 -55404961 + L2 LINE L2 3255 3301 -12 25 0 0 0 chr20 16750617 16750642 -55403240 + AT_rich Low_complexity Low_complexity 1 25 0 470 304 91 71 chr20 16751010 16751870 -55402012 + L1MDa LINE L1 2462 3371 -3169 694 95 0 12 chr20 16751951 16752162 -55401720 + AluSg1 SINE Alu 1 253 -56 277 266 54 38 chr20 16752608 16752792 -55401090 + L1MDa LINE L1 3985 4171 -2369 * 481 197 24 3 chr20 16752791 16752905 -55400977 + L1ME1 LINE L1 6065 6184 0 328 289 0 19 chr20 16752915 16753019 -55400863 + L1MDa LINE L1 4152 4253 -2287 527 338 120 40 chr20 16753119 16753944 -55399938 + L1MDa LINE L1 4350 5240 -1300 255 61 0 0 chr20 16754444 16754477 -55399405 + (CA)n Simple_repeat Simple_repeat 2 34 0 220 244 0 0 chr20 16755749 16755794 -55398088 - MIR3 SINE MIR -1 207 163 22 35 0 0 chr20 16755933 16755962 -55397920 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 104 20 chr20 16756027 16756372 -55397510 + MLT1A2 LTR MaLR 1 374 0 393 291 57 14 chr20 16756969 16757110 -55396772 - MIR SINE MIR -31 231 85 599 315 70 39 chr20 16757110 16757494 -55396388 - LTR16C LTR ERVL -2 489 94 474 308 34 72 chr20 16758546 16758838 -55395044 - LTR16C LTR ERVL -21 470 190 22 56 0 0 chr20 16759097 16759133 -55394749 + AT_rich Low_complexity Low_complexity 1 36 0 857 242 0 0 chr20 16759307 16759485 -55394397 - MER5B DNA MER1_type 0 178 1 2845 9 0 0 chr20 16761272 16761588 -55392294 + AluYb8 SINE Alu 1 316 -2 40 0 0 0 chr20 16762536 16762576 -55391306 + AT_rich Low_complexity Low_complexity 1 40 0 308 309 93 7 chr20 16762652 16762791 -55391091 + MIR3 SINE MIR 2 152 -56 225 0 0 0 chr20 16762876 16762901 -55390981 + (TTCTC)n Simple_repeat Simple_repeat 1 25 0 1772 176 3 13 chr20 16762901 16763214 -55390668 - AluJo SINE Alu 0 312 3 28 29 0 0 chr20 16764991 16765026 -55388856 + AT_rich Low_complexity Low_complexity 1 35 0 2430 173 28 10 chr20 16765166 16765668 -55388214 + Charlie1b DNA MER1_type 7 517 -6 2808 13 0 0 chr20 16765670 16765983 -55387899 - AluYb8 SINE Alu -5 313 1 39 38 0 0 chr20 16766034 16766087 -55387795 + AT_rich Low_complexity Low_complexity 1 53 0 243 0 0 0 chr20 16766310 16766337 -55387545 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 455 305 26 7 chr20 16767301 16767452 -55386430 - L2 LINE L2 0 3313 3160 206 260 163 42 chr20 16767461 16767587 -55386295 - MIR SINE MIR -92 116 30 45 34 0 0 chr20 16767794 16767853 -55386029 + AT_rich Low_complexity Low_complexity 1 59 0 967 228 137 20 chr20 16767853 16768415 -55385467 - L1ME3A LINE L1 0 6170 5511 414 272 5 94 chr20 16769557 16769748 -55384134 + MER5A DNA MER1_type 7 180 -9 1736 238 104 24 chr20 16770268 16770815 -55383067 - L1ME3A LINE L1 -75 6095 5505 246 281 40 89 chr20 16773276 16773591 -55380291 - L1MC/D LINE L1 -239 5882 5634 892 214 12 0 chr20 16773591 16773759 -55380123 + FAM SINE Alu 1 170 -5 246 281 40 89 chr20 16773759 16773847 -55380035 - L1MC/D LINE L1 -487 5634 5543 412 326 69 17 chr20 16773908 16774141 -55379741 - LTR16A LTR ERVL -179 271 27 822 179 21 0 chr20 16774266 16774411 -55379471 - FAM SINE Alu -16 169 22 435 247 39 9 chr20 16774419 16774632 -55379250 - L1MC/D LINE L1 -750 5420 5201 345 264 115 46 chr20 16774662 16774836 -55379046 - LTR33 LTR ERVL -8 513 328 991 175 166 6 chr20 16775103 16775337 -55378545 + L1MD1 LINE L1 5795 6068 -174 5484 152 19 12 chr20 16775357 16776918 -55376964 - L1PB4 LINE L1 0 6156 4586 268 155 35 35 chr20 16776917 16776975 -55376907 + L1MD1 LINE L1 6072 6129 -113 * 286 137 0 27 chr20 16776971 16777044 -55376838 + L1MDb LINE L1 1120 1190 -5219 686 138 49 0 chr20 16777045 16777168 -55376714 + L1MD1 LINE L1 6106 6234 -8 375 222 0 12 chr20 16777215 16777296 -55376586 - L1MC/D LINE L1 -719 5523 5444 21 57 0 0 chr20 16779852 16779887 -55373995 + AT_rich Low_complexity Low_complexity 1 35 0 279 0 0 0 chr20 16780373 16780404 -55373478 + (TG)n Simple_repeat Simple_repeat 2 32 0 401 318 46 4 chr20 16780949 16781188 -55372694 + HAL1b LINE L1 658 906 -442 33 66 0 0 chr20 16781359 16781420 -55372462 + AT_rich Low_complexity Low_complexity 1 61 0 1112 254 33 3 chr20 16782020 16782355 -55371527 - L1MDa LINE L1 -3654 2886 2542 4024 191 42 8 chr20 16782356 16783824 -55370058 - L1MB8 LINE L1 -8 6170 4652 629 193 103 70 chr20 16783822 16784065 -55369817 - L1MDa LINE L1 -3983 2557 2307 * 846 306 61 19 chr20 16784142 16784505 -55369377 - L1MDa LINE L1 -6144 396 19 327 272 116 14 chr20 16785123 16785270 -55368612 + MIR SINE MIR 88 249 -13 1723 106 20 27 chr20 16785446 16785739 -55368143 - L1MA1 LINE L1 -1 6301 6011 7173 126 37 14 chr20 16786987 16788189 -55365693 + Tigger3b DNA MER2_type 1 1229 -2 227 352 19 76 chr20 16789920 16790025 -55363857 - L2 LINE L2 -23 3249 3151 719 156 19 31 chr20 16790105 16790367 -55363515 - MLT1A1 LTR MaLR -62 303 1 281 78 31 31 chr20 16790369 16790433 -55363449 + (GGGAA)n Simple_repeat Simple_repeat 4 67 0 2214 93 21 0 chr20 16790490 16790780 -55363102 + AluSx SINE Alu 1 296 -16 341 376 37 0 chr20 16790929 16791038 -55362844 + L2 LINE L2 3158 3270 -2 21 0 0 0 chr20 16791305 16791326 -55362556 + AT_rich Low_complexity Low_complexity 1 21 0 598 254 248 39 chr20 16791640 16791947 -55361935 + LTR16C LTR ERVL 79 449 -42 2729 13 0 0 chr20 16791973 16792276 -55361606 - AluYa5 SINE Alu -8 303 1 1137 289 107 14 chr20 16792568 16793056 -55360826 + MLT1H LTR MaLR 17 549 0 1570 266 111 5 chr20 16795681 16796113 -55357769 + LTR16C LTR ERVL 6 483 -8 219 69 0 0 chr20 16796118 16796147 -55357735 + (CAT)n Simple_repeat Simple_repeat 2 30 0 191 283 152 82 chr20 16796153 16796397 -55357485 - MIR SINE MIR 0 262 2 419 139 69 14 chr20 16796988 16797060 -55356822 + Tigger5 DNA MER2_type 2248 2323 0 655 221 23 0 chr20 16797373 16797504 -55356378 + Tigger7 DNA MER2_type 108 241 -309 588 178 20 0 chr20 16797513 16797614 -55356268 + Tigger7 DNA MER2_type 2385 2487 0 24 32 0 0 chr20 16797705 16797736 -55356146 + AT_rich Low_complexity Low_complexity 1 31 0 364 214 39 29 chr20 16798152 16798255 -55355627 - L1ME2 LINE L1 -20 6144 6041 502 300 6 12 chr20 16798565 16798725 -55355157 - Charlie8 DNA MER1_type -2208 209 51 208 0 0 59 chr20 16799095 16799129 -55354753 + (TG)n Simple_repeat Simple_repeat 2 33 0 469 302 159 26 chr20 16799131 16799439 -55354443 - L2 LINE L2 -37 3276 2928 849 276 85 55 chr20 16801692 16802334 -55351548 - L2 LINE L2 -15 3298 2631 455 239 115 53 chr20 16802460 16802686 -55351196 + MIR SINE MIR 9 248 -14 767 313 123 12 chr20 16803191 16803517 -55350365 + LTR16C LTR ERVL 130 491 0 357 82 0 0 chr20 16804037 16804086 -55349796 + (CA)n Simple_repeat Simple_repeat 1 49 0 2515 71 0 3 chr20 16805183 16805491 -55348391 - AluSq SINE Alu -6 307 1 373 368 83 24 chr20 16805528 16805781 -55348101 - L3 LINE CR1 -9 1568 1301 1464 155 164 49 chr20 16807320 16807765 -55346117 - LTR54B LTR ERV1 -2 496 1 2340 51 3 20 chr20 16808201 16808494 -55345388 + AluY SINE Alu 12 299 -12 1043 218 147 70 chr20 16809095 16809564 -55344318 - MLT1D LTR MaLR 0 505 1 874 244 205 32 chr20 16810392 16810802 -55343080 + LTR16C LTR ERVL 11 491 0 1357 275 66 54 chr20 16810931 16811524 -55342358 + MLT1L LTR MaLR 1 600 -15 183 290 70 30 chr20 16811818 16811918 -55341964 + MIR SINE MIR 156 259 -3 1923 77 0 129 chr20 16812261 16812601 -55341281 + AluSp SINE Alu 3 298 -5 3687 128 79 65 chr20 16813280 16814054 -55339828 + LTR1 LTR ERV1 1 785 0 513 313 78 22 chr20 16815116 16815346 -55338536 + MIR SINE MIR 19 261 -1 352 283 10 0 chr20 16816541 16816640 -55337242 - MER94 DNA DNA -34 100 1 490 244 0 39 chr20 16817761 16817888 -55335994 - L2 LINE L2 -1 3312 3191 480 319 51 7 chr20 16819102 16819240 -55334642 - L2 LINE L2 -4 3268 3125 259 278 0 33 chr20 16819244 16819334 -55334548 + MIR SINE MIR 176 262 0 312 211 0 0 chr20 16819726 16819802 -55334080 + (TG)n Simple_repeat Simple_repeat 2 77 0 219 273 45 82 chr20 16819979 16820089 -55333793 - L2 LINE L2 -188 3084 2979 5177 129 13 4 chr20 16820491 16821315 -55332567 - L1PA15 LINE L1 -13 6152 5321 382 313 60 11 chr20 16822065 16822330 -55331552 + L1 LINE L1 3868 4145 -2001 368 308 40 31 chr20 16822419 16822646 -55331236 + L1 LINE L1 4280 4508 -1638 257 276 86 9 chr20 16822914 16823019 -55330863 + L1 LINE L1 4882 4994 -1152 7120 52 20 0 chr20 16823028 16823962 -55329920 - L1PA7 LINE L1 -15 6139 5201 3752 65 2 0 chr20 16823962 16824455 -55329427 + L1PA7 LINE L1 4705 5198 -948 21 82 0 0 chr20 16824462 16824511 -55329371 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr20 16824620 16824642 -55329240 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 52 58 0 0 chr20 16824653 16824740 -55329142 + AT_rich Low_complexity Low_complexity 1 87 0 3268 160 39 19 chr20 16824740 16825214 -55328668 - L1MA7 LINE L1 -21 6270 5778 375 23 0 0 chr20 16825214 16825258 -55328624 + (TG)n Simple_repeat Simple_repeat 2 45 0 3268 160 39 19 chr20 16825258 16825421 -55328461 - L1MA7 LINE L1 -513 5778 5620 751 296 111 19 chr20 16826085 16826447 -55327435 - MLT1J2 LTR MaLR 0 450 56 252 86 0 0 chr20 16826781 16826816 -55327066 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr20 16829264 16829288 -55324594 + AT_rich Low_complexity Low_complexity 1 24 0 1298 89 0 5 chr20 16829289 16829479 -55324403 - L1MA1 LINE L1 -1 6301 6113 786 275 42 8 chr20 16830950 16831190 -55322692 - MIR SINE MIR -3 259 12 469 191 16 26 chr20 16831658 16831802 -55322080 - L1ME4a LINE L1 -292 5829 5704 223 211 19 0 chr20 16831814 16831866 -55322016 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 361 305 11 11 chr20 16832017 16832112 -55321770 + L2 LINE L2 3192 3286 -27 1667 241 55 104 chr20 16832112 16832872 -55321010 - L1M4 LINE L1 -5468 1074 352 441 230 25 81 chr20 16832996 16833157 -55320725 - L1M4b LINE L1 -5286 1573 1422 * 789 191 74 78 chr20 16833145 16833376 -55320506 - L1MB3 LINE L1 -2 6181 5952 264 157 29 29 chr20 16833425 16833495 -55320387 + L1MDa LINE L1 1518 1587 -4953 684 147 0 37 chr20 16833501 16833637 -55320245 - L1MB3 LINE L1 -98 6085 5955 299 206 108 20 chr20 16833631 16833733 -55320149 - L1M4b LINE L1 -5417 1442 1332 * 1972 137 0 3 chr20 16833752 16834044 -55319838 - AluY SINE Alu -20 291 1 275 266 40 145 chr20 16834247 16834495 -55319387 - L1M4b LINE L1 -5678 1177 956 261 259 127 78 chr20 16834704 16834909 -55318973 - L1M4b LINE L1 -6625 234 20 1090 207 0 0 chr20 16834946 16835134 -55318748 + MER5A DNA MER1_type 1 188 -1 554 307 88 13 chr20 16836256 16836494 -55317388 + MIR SINE MIR 5 260 -2 352 359 16 8 chr20 16836510 16836638 -55317244 - L2 LINE L2 -3 3310 3182 21 0 0 0 chr20 16839324 16839345 -55314537 + AT_rich Low_complexity Low_complexity 1 21 0 314 211 40 0 chr20 16840619 16840695 -55313187 + L2 LINE L2 2976 3054 -218 397 196 9 9 chr20 16840890 16841002 -55312880 + GA-rich Low_complexity Low_complexity 3 114 0 1936 149 0 14 chr20 16841168 16841464 -55312418 - AluJb SINE Alu -20 292 1 212 217 0 0 chr20 16842257 16842303 -55311579 + L2 LINE L2 3268 3313 0 614 124 0 0 chr20 16842414 16842511 -55311371 - L1PB3 LINE L1 0 6154 6058 23 0 0 0 chr20 16842926 16842949 -55310933 + AT_rich Low_complexity Low_complexity 1 23 0 233 347 31 0 chr20 16843671 16843769 -55310113 + MIR3 SINE MIR 5 105 -103 654 224 159 101 chr20 16845143 16845571 -55308311 + MLT1J LTR MaLR 22 474 -37 369 216 46 92 chr20 16846004 16846157 -55307725 - MIR SINE MIR -41 221 76 222 177 32 32 chr20 16846409 16846471 -55307411 + GA-rich Low_complexity Low_complexity 3 64 0 23 0 0 0 chr20 16847046 16847069 -55306813 + AT_rich Low_complexity Low_complexity 1 23 0 916 101 0 16 chr20 16850726 16850855 -55303027 + AluSg/x SINE Alu 173 299 -11 186 43 0 0 chr20 16851906 16851929 -55301953 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 279 233 0 81 chr20 16851937 16852023 -55301859 - MIR3 SINE MIR -46 162 84 266 339 119 0 chr20 16852985 16853094 -55300788 + L2 LINE L2 3190 3311 -2 187 292 45 22 chr20 16853414 16853503 -55300379 + MIR SINE MIR 166 256 -6 2251 115 3 0 chr20 16853894 16854199 -55299683 + AluSq SINE Alu 1 306 -7 773 318 122 13 chr20 16854210 16854676 -55299206 + LTR33 LTR ERVL 1 517 -4 37 0 0 0 chr20 16854860 16854897 -55298985 + AT_rich Low_complexity Low_complexity 1 37 0 2563 56 0 3 chr20 16854989 16855293 -55298589 - AluY SINE Alu -8 303 1 261 243 29 14 chr20 16855450 16855520 -55298362 - L1MC/D LINE L1 -2042 5766 5696 264 77 0 0 chr20 16855524 16855563 -55298319 + (TG)n Simple_repeat Simple_repeat 2 40 0 4837 110 7 46 chr20 16855600 16856421 -55297461 + L1MA2 LINE L1 5516 6304 0 22 94 0 0 chr20 16856469 16856533 -55297349 + AT_rich Low_complexity Low_complexity 1 64 0 2409 84 3 0 chr20 16857007 16857317 -55296565 + AluSp SINE Alu 1 311 -2 186 311 16 16 chr20 16857454 16857515 -55296367 - L2 LINE L2 -1 3271 3211 522 314 63 6 chr20 16857676 16857851 -55296031 - MIR SINE MIR -64 198 14 538 282 46 6 chr20 16858802 16858976 -55294906 - MIR SINE MIR -13 249 69 23 0 0 0 chr20 16860148 16860171 -55293711 + AT_rich Low_complexity Low_complexity 1 23 0 202 244 24 0 chr20 16860365 16860406 -55293476 + MIR SINE MIR 78 119 -143 23 54 0 0 chr20 16860406 16860443 -55293439 + AT_rich Low_complexity Low_complexity 1 37 0 25 91 0 10 chr20 16860522 16860541 -55293341 + AT_rich Low_complexity Low_complexity 1 19 -79 1531 155 50 32 chr20 16860541 16860818 -55293064 + AluJo SINE Alu 1 282 -30 25 91 0 10 chr20 16860818 16860897 -55292985 + AT_rich Low_complexity Low_complexity 19 98 0 1615 228 89 78 chr20 16861002 16862017 -55291865 + L1MDb LINE L1 150 1066 -5477 716 193 123 60 chr20 16862005 16862305 -55291577 + L1MDb LINE L1 1471 1789 -4751 * 1344 224 27 100 chr20 16862305 16862706 -55291176 + LTR16A LTR ERVL 78 449 -1 30 0 0 0 chr20 16862987 16863017 -55290865 + AT_rich Low_complexity Low_complexity 1 30 0 2195 116 0 3 chr20 16864057 16864351 -55289531 + AluSx SINE Alu 2 294 -18 3189 209 46 54 chr20 16864767 16866401 -55287481 + L1MA6 LINE L1 2616 4229 -3336 * 5570 153 29 33 chr20 16866397 16867683 -55286199 + L1MA6 LINE L1 6428 7719 0 23 0 0 0 chr20 16867689 16867712 -55286170 + AT_rich Low_complexity Low_complexity 1 23 0 242 196 0 0 chr20 16867806 16867857 -55286025 + (CA)n Simple_repeat Simple_repeat 1 51 0 268 312 0 46 chr20 16867946 16868055 -55285827 + L2 LINE L2 2978 3081 -191 24 0 0 0 chr20 16868102 16868126 -55285756 + AT_rich Low_complexity Low_complexity 1 24 0 194 269 128 0 chr20 16868237 16868315 -55285567 + MIR SINE MIR 175 262 0 14372 139 17 121 chr20 16869335 16871903 -55281979 + L1P LINE L1 12 2135 -4011 1978 122 4 0 chr20 16871903 16872174 -55281708 + AluSg SINE Alu 1 272 -38 14372 139 17 121 chr20 16872174 16873038 -55280844 + L1P LINE L1 2135 3087 -3059 * 43741 43 5 9 chr20 16873037 16879210 -55274672 + L1PA4 LINE L1 2 6152 -3 6455 99 4 6 chr20 16879206 16880176 -55273706 + L1P LINE L1 3072 4039 -2107 * 6722 40 0 0 chr20 16880176 16880974 -55272908 + L1PA7 LINE L1 5339 6141 -13 273 284 14 14 chr20 16881169 16881310 -55272572 + (TA)n Simple_repeat Simple_repeat 1 141 0 22 0 0 0 chr20 16881639 16881661 -55272221 + AT_rich Low_complexity Low_complexity 1 22 0 416 237 64 39 chr20 16881820 16881976 -55271906 - Charlie7 DNA MER1_type -754 1858 1699 555 243 47 27 chr20 16882007 16882155 -55271727 - MER21B LTR ERV1 -392 471 321 565 253 72 9 chr20 16882176 16882397 -55271485 - Charlie7 DNA MER1_type -927 1685 1451 2042 134 0 3 chr20 16882592 16882882 -55271000 - AluSx SINE Alu -10 302 14 2209 42 0 4 chr20 16883737 16883999 -55269883 + AluY SINE Alu 42 302 -9 30 27 0 0 chr20 16884947 16884984 -55268898 + AT_rich Low_complexity Low_complexity 1 37 0 2283 42 0 0 chr20 16885699 16885963 -55267919 + AluY SINE Alu 39 302 -9 261 254 134 0 chr20 16885991 16886058 -55267824 + MIR SINE MIR 77 152 -56 453 291 22 28 chr20 16886090 16886272 -55267610 + MLT1J LTR MaLR 326 506 -5 388 310 50 44 chr20 16886441 16886738 -55267144 + L1ME LINE L1 5298 5596 -2212 226 284 68 27 chr20 16886753 16886901 -55266981 + L1ME LINE L1 5753 5906 -215 188 211 39 148 chr20 16888605 16888733 -55265149 + MIR SINE MIR 13 126 -136 1382 248 39 45 chr20 16888910 16889252 -55264630 + LTR16C LTR ERVL 3 343 -148 1982 130 7 23 chr20 16889252 16889553 -55264329 - AluSx SINE Alu -16 296 1 1382 248 39 45 chr20 16889553 16889702 -55264180 + LTR16C LTR ERVL 343 491 0 394 320 56 16 chr20 16890864 16890989 -55262893 + MIR SINE MIR 19 148 -114 214 211 70 56 chr20 16891234 16891305 -55262577 + L2 LINE L2 3234 3305 -8 2109 126 30 0 chr20 16892017 16892318 -55261564 - AluSx SINE Alu -2 310 1 333 82 0 0 chr20 16892687 16892736 -55261146 + (CA)n Simple_repeat Simple_repeat 2 50 0 2338 101 0 3 chr20 16893395 16893703 -55260179 + AluSg SINE Alu 1 307 -3 486 286 131 0 chr20 16894270 16894438 -55259444 + MIR SINE MIR 2 191 -71 488 278 240 38 chr20 16894578 16894945 -55258937 + MLT1J2 LTR MaLR 3 443 -7 2476 261 104 39 chr20 16895383 16896435 -55257447 - L2 LINE L2 -8 3305 1897 860 288 31 0 chr20 16896763 16896985 -55256897 - MIR SINE MIR 0 262 34 2185 125 0 0 chr20 16897116 16897413 -55256469 + AluSx SINE Alu 1 297 -15 2429 63 0 10 chr20 16897615 16897918 -55255964 - AluY SINE Alu -11 300 1 180 176 0 0 chr20 16898146 16898180 -55255702 + GA-rich Low_complexity Low_complexity 2 35 0 2166 138 0 0 chr20 16898420 16898725 -55255157 - AluSx SINE Alu -7 305 1 1083 275 149 23 chr20 16899235 16899624 -55254258 - MLT1H LTR MaLR 0 549 112 550 340 99 0 chr20 16899707 16899869 -55254013 + MER91A DNA MER1_type 18 195 -1 447 273 60 40 chr20 16900192 16900241 -55253641 - MIR SINE MIR -2 260 213 1380 135 36 0 chr20 16900241 16900463 -55253419 + MER30 DNA MER1_type 1 230 0 447 273 60 40 chr20 16900463 16900563 -55253319 - MIR SINE MIR -49 213 108 195 42 0 0 chr20 16900867 16900891 -55252991 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 909 288 28 4 chr20 16900921 16901171 -55252711 - MIR SINE MIR -6 256 1 4307 216 40 5 chr20 16901322 16902882 -55251000 + L1MA9 LINE L1 4655 6273 -39 2048 134 7 3 chr20 16903109 16903400 -55250482 - AluSq SINE Alu -21 292 1 246 300 94 81 chr20 16903796 16904019 -55249863 - MIR SINE MIR -2 260 35 190 426 45 13 chr20 16904065 16904220 -55249662 - L2 LINE L2 -31 3241 3082 1943 158 0 0 chr20 16904708 16905000 -55248882 + AluSx SINE Alu 3 294 -18 409 250 158 0 chr20 16905056 16905176 -55248706 + L2 LINE L2 3175 3313 0 1134 244 76 42 chr20 16905267 16905714 -55248168 + MLT1C LTR MaLR 6 467 0 891 220 203 10 chr20 16905826 16906122 -55247760 - L2 LINE L2 -1377 1937 1585 235 250 14 42 chr20 16907660 16907732 -55246150 + MIR SINE MIR 193 262 0 343 309 197 17 chr20 16908205 16908621 -55245261 - L2 LINE L2 -1 3312 2770 317 338 45 25 chr20 16908880 16909037 -55244845 + MIR3 SINE MIR 37 196 -12 321 309 73 9 chr20 16909356 16909466 -55244416 + MIR SINE MIR 5 121 -141 366 357 106 38 chr20 16909546 16909619 -55244263 + L2 LINE L2 2282 2349 -965 899 234 122 68 chr20 16909619 16910101 -55243781 - MLT1J LTR MaLR -3 508 1 366 357 106 38 chr20 16910101 16910528 -55243354 + L2 LINE L2 2349 2816 -498 929 279 52 47 chr20 16910649 16911054 -55242828 - LTR16C LTR ERVL -1 490 84 341 199 53 20 chr20 16913111 16913262 -55240620 + (TA)n Simple_repeat Simple_repeat 2 157 0 3268 278 146 35 chr20 16913633 16915595 -55238287 + HAL1 LINE L1 239 2418 -89 387 290 37 43 chr20 16915984 16916146 -55237736 - MER117 DNA MER1_type -4 193 33 27 49 0 0 chr20 16916442 16916483 -55237399 + AT_rich Low_complexity Low_complexity 1 41 0 2438 72 3 0 chr20 16916651 16916957 -55236925 + AluSp SINE Alu 1 307 -6 2382 66 0 3 chr20 16916994 16917295 -55236587 - AluY SINE Alu -11 300 1 275 272 52 99 chr20 16917332 16917545 -55236337 + L1M3 LINE L1 47 249 -6293 2352 225 50 20 chr20 16917734 16919148 -55234734 + L1M3 LINE L1 1940 3486 -3158 1795 234 17 19 chr20 16919176 16919654 -55234228 + L1M3 LINE L1 3829 4305 -2339 1745 183 0 45 chr20 16919654 16919720 -55234162 + L1M3 LINE L1 5624 5691 -987 1867 146 7 14 chr20 16919720 16920014 -55233868 + AluJo SINE Alu 1 292 -20 1745 183 0 45 chr20 16920014 16920462 -55233420 + L1M3 LINE L1 5691 6116 -562 400 128 0 9 chr20 16920468 16920545 -55233337 - L1M3 LINE L1 -519 5649 5577 21 0 0 0 chr20 16920551 16920572 -55233310 + AT_rich Low_complexity Low_complexity 1 21 0 580 234 129 24 chr20 16920643 16920891 -55232991 + L1ME4a LINE L1 5611 5884 -237 24 67 0 0 chr20 16921063 16921108 -55232774 + AT_rich Low_complexity Low_complexity 1 45 0 2333 94 3 0 chr20 16921359 16921668 -55232214 + AluSp SINE Alu 1 310 -3 314 268 0 0 chr20 16922201 16922272 -55231610 + MIR3 SINE MIR 128 198 -10 679 11 23 0 chr20 16923602 16923690 -55230192 + (TAGA)n Simple_repeat Simple_repeat 2 91 0 272 137 0 59 chr20 16923994 16924045 -55229837 + L2 LINE L2 3265 3312 -1 2314 90 0 0 chr20 16924460 16924750 -55229132 + AluSc SINE Alu 5 294 -15 1936 240 103 65 chr20 16925579 16926694 -55227188 - L2 LINE L2 0 3313 2153 216 255 20 20 chr20 16927401 16927499 -55226383 + (TA)n Simple_repeat Simple_repeat 1 98 0 324 306 0 0 chr20 16927516 16927588 -55226294 + MIR SINE MIR 11 82 -180 423 289 35 0 chr20 16927956 16928070 -55225812 - MIR SINE MIR -25 237 120 370 289 29 10 chr20 16928860 16928964 -55224918 - MER91C DNA MER1_type -34 106 1 624 309 36 32 chr20 16929802 16930054 -55223828 - LTR16C LTR ERVL -3 488 236 264 324 176 14 chr20 16930061 16930122 -55223760 + MER5A DNA MER1_type 9 59 -130 1963 155 19 30 chr20 16930122 16930490 -55223392 + L1PA16 LINE L1 5803 6166 0 264 324 176 14 chr20 16930490 16930576 -55223306 + MER5A DNA MER1_type 59 180 -9 429 306 45 38 chr20 16930585 16930742 -55223140 - LTR16C LTR ERVL -253 238 81 531 289 93 18 chr20 16931130 16931264 -55222618 + MIR SINE MIR 12 171 -91 185 65 32 0 chr20 16931264 16931295 -55222587 + (TAA)n Simple_repeat Simple_repeat 2 33 0 531 289 93 18 chr20 16931295 16931385 -55222497 + MIR SINE MIR 171 253 -9 209 324 81 0 chr20 16931485 16931559 -55222323 - L2 LINE L2 -9 3263 3184 752 236 80 42 chr20 16932518 16932755 -55221127 - MIR SINE MIR -16 246 1 286 292 36 66 chr20 16933968 16934105 -55219777 - L2 LINE L2 -2 3311 3179 386 302 40 7 chr20 16935647 16935862 -55218020 - L1MEc LINE L1 -3758 2457 2241 1281 180 123 11 chr20 16936104 16936365 -55217517 - AluSx SINE Alu -19 293 4 714 278 154 23 chr20 16936413 16937024 -55216858 - L1MEc LINE L1 -4909 1296 606 285 172 0 0 chr20 16938151 16938215 -55215667 + (CA)n Simple_repeat Simple_repeat 1 64 0 1398 100 0 0 chr20 16939311 16939501 -55214381 + L1P4 LINE L1 5554 5743 -425 2523 264 59 24 chr20 16939855 16941404 -55212478 + L1MEc LINE L1 23 1649 -4747 1797 139 0 4 chr20 16941425 16941691 -55212191 + AluSx SINE Alu 34 298 -14 230 284 49 0 chr20 16941700 16941781 -55212101 + L1MEc LINE L1 1635 1719 -4677 528 244 105 6 chr20 16941816 16941988 -55211894 + L1MEc LINE L1 1703 1891 -4505 * 5255 136 38 48 chr20 16941964 16943107 -55210775 + L1MA5 LINE L1 5239 6369 0 7239 226 57 42 chr20 16943111 16943420 -55210462 + L1MEc LINE L1 1850 2153 -4062 2270 102 0 7 chr20 16943420 16943723 -55210159 + AluSg SINE Alu 1 301 -9 7239 226 57 42 chr20 16943723 16943772 -55210110 + L1MEc LINE L1 2153 2200 -4015 2436 74 0 0 chr20 16943772 16944069 -55209813 - AluY SINE Alu -14 297 1 7239 226 57 42 chr20 16944069 16944661 -55209221 + L1MEc LINE L1 2200 2782 -3433 680 225 0 0 chr20 16944661 16944790 -55209092 + FLAM_A SINE Alu 3 131 -2 7239 226 57 42 chr20 16944790 16946546 -55207336 + L1MEc LINE L1 2782 4667 -1548 1759 202 27 25 chr20 16946612 16946978 -55206904 - MLT1A2 LTR MaLR -7 367 1 259 181 28 0 chr20 16948393 16948465 -55205417 + GA-rich Low_complexity Low_complexity 3 76 0 2233 103 6 3 chr20 16948730 16949049 -55204833 - L1PA16 LINE L1 -10 6156 5837 5782 120 10 3 chr20 16949078 16949961 -55203921 - L1PA13 LINE L1 -4 6159 5271 5694 159 14 3 chr20 16949947 16950967 -55202915 - L1PA13 LINE L1 -1133 5013 3983 * 1146 220 116 0 chr20 16950974 16951224 -55202658 + Tigger2 DNA MER2_type 265 543 -2175 274 179 0 36 chr20 16951224 16951271 -55202611 + Alu SINE Alu 236 282 -20 1600 109 4 4 chr20 16951271 16951501 -55202381 - AluSg/x SINE Alu -10 302 73 2227 109 0 7 chr20 16951533 16951835 -55202047 + AluSx SINE Alu 1 300 -12 1145 165 20 10 chr20 16951853 16952053 -55201829 + Tigger2 DNA MER2_type 542 743 -1975 1114 177 74 12 chr20 16952120 16952363 -55201519 + Tigger2 DNA MER2_type 2461 2718 0 2326 88 0 10 chr20 16952401 16952698 -55201184 + AluY SINE Alu 1 294 -17 1529 247 106 46 chr20 16952788 16953692 -55200190 + L1M4c LINE L1 31 1026 -5254 2170 195 19 10 chr20 16953888 16954099 -55199783 - MSTB LTR MaLR -4 422 215 186 43 0 0 chr20 16954099 16954122 -55199760 + (GA)n Simple_repeat Simple_repeat 2 24 0 2170 195 19 10 chr20 16954122 16954326 -55199556 - MSTB LTR MaLR -211 215 3 371 305 86 40 chr20 16954510 16954684 -55199198 + MIR SINE MIR 67 248 -14 225 0 0 0 chr20 16958010 16958035 -55195847 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2267 80 3 0 chr20 16958038 16958326 -55195556 - AluSp SINE Alu -24 289 1 2348 78 3 0 chr20 16958357 16958652 -55195230 + AluY SINE Alu 5 300 -11 556 287 23 43 chr20 16959327 16959585 -55194297 - MER46C DNA MER2_type 0 338 86 4608 186 47 10 chr20 16959819 16961265 -55192617 + L1MB4 LINE L1 4663 6168 -12 476 138 0 0 chr20 16961290 16961370 -55192512 + L1MB8 LINE L1 6098 6177 -1 812 260 48 8 chr20 16961427 16961677 -55192205 + MIR SINE MIR 3 262 0 801 294 173 18 chr20 16962137 16962467 -55191415 - LTR16A LTR ERVL -56 394 14 892 211 22 11 chr20 16962482 16962667 -55191215 + MER5A DNA MER1_type 2 188 -1 357 256 42 48 chr20 16963502 16963670 -55190212 - MIR SINE MIR -26 236 70 577 316 48 5 chr20 16963691 16963900 -55189982 - MIR SINE MIR -14 248 31 1861 149 3 11 chr20 16963913 16964243 -55189639 - AluJo SINE Alu 0 332 5 262 194 43 97 chr20 16964277 16964370 -55189512 - MER5B DNA MER1_type -89 89 2 23 0 0 0 chr20 16965436 16965459 -55188423 + AT_rich Low_complexity Low_complexity 1 23 0 297 312 71 68 chr20 16968547 16968858 -55185024 - L2 LINE L2 -3 3310 2999 213 39 0 0 chr20 16968876 16968902 -55184980 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr20 16969106 16969134 -55184748 + AT_rich Low_complexity Low_complexity 1 28 0 1723 185 3 19 chr20 16969201 16969509 -55184373 - AluJo SINE Alu -8 304 2 26 50 0 0 chr20 16969672 16969712 -55184170 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr20 16969779 16969801 -55184081 + AT_rich Low_complexity Low_complexity 1 22 0 3542 243 75 68 chr20 16971082 16972160 -55181722 + L1MB5 LINE L1 2 1071 -5573 2167 92 32 0 chr20 16972160 16972442 -55181440 - AluY SINE Alu -20 291 1 3542 243 75 68 chr20 16972442 16974048 -55179834 + L1MB5 LINE L1 1071 2664 -3980 2148 116 3 0 chr20 16974048 16974341 -55179541 + AluSc SINE Alu 1 294 -15 3542 243 75 68 chr20 16974341 16975862 -55178020 + L1MB5 LINE L1 2664 4274 -2370 1977 205 16 38 chr20 16975834 16976282 -55177600 + L1MB5 LINE L1 6234 6671 -1 * 603 219 6 61 chr20 16976631 16976795 -55177087 - MER5B DNA MER1_type -22 156 2 2565 39 13 3 chr20 16976866 16977174 -55176708 - AluY SINE Alu 0 311 1 397 287 93 13 chr20 16977285 16977435 -55176447 + MIR SINE MIR 2 163 -99 263 336 48 16 chr20 16977486 16977611 -55176271 - MIR SINE MIR -106 156 28 995 154 67 5 chr20 16977695 16977890 -55175992 - MER63 DNA MER1_type -14 1047 841 530 270 132 0 chr20 16978356 16978515 -55175367 + MIR SINE MIR 58 237 -25 232 290 97 0 chr20 16979507 16979600 -55174282 - MER117 DNA MER1_type -72 125 24 188 311 16 0 chr20 16979828 16979889 -55173993 - MIR SINE MIR 0 262 201 4605 127 19 37 chr20 16980319 16980841 -55173041 - L1MA8 LINE L1 -17 6274 5771 1714 167 39 0 chr20 16980841 16981122 -55172760 - AluJb SINE Alu -20 292 1 4605 127 19 37 chr20 16981122 16981428 -55172454 - L1MA8 LINE L1 -520 5771 5461 1872 161 0 3 chr20 16981495 16981808 -55172074 - AluJo SINE Alu 0 312 1 501 236 103 56 chr20 16981872 16981963 -55171919 + MIR SINE MIR 46 131 -131 2345 83 0 3 chr20 16981963 16982263 -55171619 + AluSc SINE Alu 7 305 -4 501 236 103 56 chr20 16982263 16982366 -55171516 + MIR SINE MIR 131 249 -13 1554 266 80 35 chr20 16983501 16983908 -55169974 + MLT1G1 LTR MaLR 3 443 -152 2348 113 0 0 chr20 16983908 16984218 -55169664 + AluSx SINE Alu 1 310 -2 1554 266 80 35 chr20 16984218 16984373 -55169509 + MLT1G1 LTR MaLR 443 590 -5 594 348 8 25 chr20 16984417 16984661 -55169221 - MIR SINE MIR -16 246 7 260 148 131 0 chr20 16984978 16985039 -55168843 - L1ME4a LINE L1 -91 6030 5962 3564 108 58 45 chr20 16985485 16986108 -55167774 + L1PA16 LINE L1 5529 6159 -7 367 243 0 0 chr20 16986130 16986200 -55167682 - Charlie1 DNA MER1_type -2646 115 46 277 302 9 20 chr20 16986364 16986581 -55167301 + L1ME LINE L1 5187 5399 -747 373 264 167 56 chr20 16986715 16986931 -55166951 + MLT1L LTR MaLR 5 244 -371 515 261 22 22 chr20 16987048 16987186 -55166696 + MLT1L LTR MaLR 474 611 -4 406 264 35 14 chr20 16987195 16987339 -55166543 + L1ME LINE L1 5572 5718 -452 546 280 36 0 chr20 16987514 16987682 -55166200 + MLT1J LTR MaLR 334 507 -4 301 266 31 8 chr20 16988137 16988265 -55165617 + L1ME LINE L1 5555 5685 -436 782 78 0 0 chr20 16988289 16988391 -55165491 - U6 snRNA snRNA -2 105 4 8920 144 17 20 chr20 16988507 16990664 -55163218 + L1MA2 LINE L1 3675 5828 -476 1583 75 5 5 chr20 16990664 16990863 -55163019 + AluSx SINE Alu 1 199 -113 1491 135 0 17 chr20 16990900 16991137 -55162745 + L1MA2 LINE L1 5814 6046 -258 36 23 0 0 chr20 16991137 16991180 -55162702 + AT_rich Low_complexity Low_complexity 1 43 0 1356 126 90 12 chr20 16991199 16991454 -55162428 + L1MA2 LINE L1 6030 6304 0 1726 183 0 0 chr20 16991617 16991896 -55161986 - AluJb SINE Alu -2 310 32 2230 110 3 25 chr20 16992414 16992733 -55161149 - AluSx SINE Alu 0 312 1 2027 89 59 36 chr20 16994589 16994893 -55158989 - AluY SINE Alu 0 311 1 261 138 5 3 chr20 16994983 16995201 -55158681 + AluSx SINE Alu 1 294 -7 180 111 0 0 chr20 16995430 16995457 -55158425 + (TAA)n Simple_repeat Simple_repeat 2 28 0 255 322 44 11 chr20 16997301 16997391 -55156491 - MIR SINE MIR -95 167 75 799 294 69 71 chr20 16998452 16999014 -55154868 + MLT1K LTR MaLR 26 586 -2 2231 106 3 3 chr20 16999052 16999353 -55154529 - AluSq SINE Alu -8 305 5 219 250 19 0 chr20 16999469 16999521 -55154361 - L3 LINE CR1 0 1577 1525 238 82 61 0 chr20 16999563 16999612 -55154270 + (TGAA)n Simple_repeat Simple_repeat 4 55 0 263 244 85 56 chr20 17000314 17000482 -55153400 - MIR SINE MIR 0 262 2 28 0 0 0 chr20 17001270 17001298 -55152584 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr20 17002090 17002126 -55151756 + AT_rich Low_complexity Low_complexity 1 36 0 1733 93 141 0 chr20 17002345 17002593 -55151289 - AluSp SINE Alu -30 283 1 31 68 0 0 chr20 17004341 17004400 -55149482 + AT_rich Low_complexity Low_complexity 1 59 0 203 241 17 35 chr20 17006959 17007017 -55146865 + L2 LINE L2 3248 3304 -9 22 0 0 0 chr20 17015619 17015641 -55138241 + AT_rich Low_complexity Low_complexity 1 22 0 3826 194 83 14 chr20 17016936 17017741 -55136141 + MER21B LTR ERV1 1 861 -2 398 255 129 0 chr20 17017743 17017883 -55135999 + MIR SINE MIR 32 191 -57 234 0 0 0 chr20 17018511 17018537 -55135345 + (TA)n Simple_repeat Simple_repeat 2 27 0 2304 106 0 0 chr20 17019337 17019630 -55134252 - AluSx SINE Alu -19 293 1 207 220 70 180 chr20 17019885 17020085 -55133797 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr20 17020277 17020300 -55133582 + AT_rich Low_complexity Low_complexity 1 23 0 217 361 138 4 chr20 17020309 17020569 -55133313 - L2 LINE L2 -649 2665 2371 321 215 127 0 chr20 17020609 17020688 -55133194 - MER94 DNA DNA -32 102 14 215 312 137 39 chr20 17020812 17021200 -55132682 - L2 LINE L2 -1115 2199 1774 452 271 66 13 chr20 17022801 17022952 -55130930 - MIR SINE MIR -8 254 96 326 332 152 41 chr20 17022954 17023076 -55130806 - L2 LINE L2 0 3313 3206 2216 78 17 17 chr20 17023076 17023371 -55130511 - AluSc SINE Alu -10 299 5 326 332 152 41 chr20 17023371 17023688 -55130194 - L2 LINE L2 -107 3206 2825 189 250 24 71 chr20 17023837 17023921 -55129961 - L2 LINE L2 -598 2716 2637 1628 114 13 0 chr20 17024028 17024255 -55129627 + MER30 DNA MER1_type 1 230 0 505 280 32 59 chr20 17025115 17025301 -55128581 + L2 LINE L2 3133 3313 0 347 299 69 21 chr20 17025444 17025591 -55128291 - MIR SINE MIR -59 149 3 456 306 102 11 chr20 17025689 17025875 -55128007 + MIR SINE MIR 11 213 -49 2148 96 3 0 chr20 17025916 17026234 -55127648 - AluSp SINE Alu 0 319 1 454 314 124 38 chr20 17027814 17028024 -55125858 + MIR SINE MIR 4 231 -31 326 335 12 4 chr20 17028054 17028235 -55125647 + MIR SINE MIR 2 249 -13 239 227 30 82 chr20 17028466 17028575 -55125307 - MER5A DNA MER1_type -75 114 1 2176 107 3 0 chr20 17028895 17029193 -55124689 + AluSx SINE Alu 1 299 -13 6911 115 69 9 chr20 17029203 17030364 -55123518 - Tigger3b DNA MER2_type 0 1231 1 21 71 0 0 chr20 17031523 17031565 -55122317 + AT_rich Low_complexity Low_complexity 1 42 0 315 0 0 0 chr20 17033665 17033700 -55120182 + (TG)n Simple_repeat Simple_repeat 2 36 0 511 313 106 8 chr20 17034172 17034418 -55119464 + L3 LINE CR1 422 691 -886 248 277 201 38 chr20 17034431 17034799 -55119083 - L2 LINE L2 -1257 2057 1630 585 284 53 62 chr20 17035345 17035582 -55118300 - L2 LINE L2 -99 3214 2979 775 188 23 23 chr20 17035582 17035758 -55118124 - MER5B DNA MER1_type -1 177 2 585 284 53 62 chr20 17035758 17035840 -55118042 - L2 LINE L2 -334 2979 2898 202 135 27 0 chr20 17035929 17035966 -55117916 + A-rich Low_complexity Low_complexity 2 39 0 289 308 9 19 chr20 17036197 17036304 -55117578 + L3 LINE CR1 900 1005 -572 424 296 70 38 chr20 17036374 17036560 -55117322 + L3 LINE CR1 1001 1192 -385 2089 113 13 3 chr20 17037761 17038062 -55115820 + AluSg SINE Alu 1 304 -6 325 202 214 24 chr20 17038249 17038333 -55115549 + MLT1E2 LTR MaLR 1 100 -554 * 1821 190 110 3 chr20 17038319 17038692 -55115190 + MLT1E2 LTR MaLR 213 625 -1 767 292 19 4 chr20 17039491 17039748 -55114134 + MIR SINE MIR 2 262 0 189 74 0 0 chr20 17040228 17040255 -55113627 + (CAA)n Simple_repeat Simple_repeat 2 28 0 379 293 106 0 chr20 17040362 17040485 -55113397 + MIR SINE MIR 107 242 -20 337 93 0 0 chr20 17041062 17041105 -55112777 - Tigger1 DNA MER2_type 0 2418 2376 1135 98 0 6 chr20 17041108 17041271 -55112611 - Tigger1 DNA MER2_type -467 1951 1790 * 14321 137 30 9 chr20 17041269 17042126 -55111756 - Tigger1 DNA MER2_type -46 2372 1534 2434 90 0 0 chr20 17042126 17042427 -55111455 - AluSq SINE Alu -12 301 1 14321 137 30 9 chr20 17042427 17043889 -55109993 - Tigger1 DNA MER2_type -884 1534 5 1374 251 26 13 chr20 17044110 17044501 -55109381 - L1ME3A LINE L1 -219 5951 5556 207 306 28 0 chr20 17045000 17045072 -55108810 + L2 LINE L2 3240 3313 0 428 220 120 13 chr20 17045575 17045725 -55108157 + L1MC5 LINE L1 7701 7866 -95 262 267 0 0 chr20 17046447 17046507 -55107375 + (CA)n Simple_repeat Simple_repeat 2 61 0 1236 272 109 28 chr20 17047009 17047554 -55106328 + L2 LINE L2 2730 3311 -2 356 258 140 0 chr20 17047658 17047751 -55106131 + L2 LINE L2 3158 3263 -9 201 50 0 125 chr20 17047759 17047778 -55106104 + (TGAA)n Simple_repeat Simple_repeat 1 15 -20 2217 99 0 0 chr20 17047778 17048080 -55105802 + AluSq SINE Alu 1 302 0 201 50 0 125 chr20 17048080 17048099 -55105783 + (TGAA)n Simple_repeat Simple_repeat 15 35 0 1365 228 87 65 chr20 17048196 17048238 -55105644 + LTR16A1 LTR ERVL 1 41 -416 946 196 41 45 chr20 17048238 17048458 -55105424 - MER20 DNA MER1_type 0 219 1 1365 228 87 65 chr20 17048458 17048862 -55105020 + LTR16A1 LTR ERVL 41 457 0 2308 100 3 0 chr20 17049904 17050205 -55103677 + AluSp SINE Alu 1 302 -11 566 215 22 7 chr20 17050428 17050563 -55103319 - L1PA14 LINE L1 -2 6159 6023 1790 165 3 10 chr20 17050872 17051175 -55102707 + AluJo SINE Alu 1 301 -11 595 224 36 42 chr20 17052247 17052412 -55101470 - MLT1J LTR MaLR -24 487 324 566 239 13 65 chr20 17052407 17052562 -55101320 - MLT1J LTR MaLR -358 153 7 * 2407 236 33 25 chr20 17052605 17053174 -55100708 + MLT1E LTR MaLR 15 588 -5 369 43 0 0 chr20 17053282 17053329 -55100553 + (CAT)n Simple_repeat Simple_repeat 2 48 0 1868 136 51 26 chr20 17055242 17055594 -55098288 + MER46B DNA MER2_type 1 236 0 1001 113 0 0 chr20 17056913 17057046 -55096836 + AluSq/x SINE Alu 1 133 -180 561 263 45 0 chr20 17057619 17057752 -55096130 + MLT1H1 LTR MaLR 17 155 -400 2137 156 82 10 chr20 17057763 17058154 -55095728 + MSTA LTR MaLR 10 428 0 384 246 95 77 chr20 17058161 17058383 -55095499 + MLT1G1 LTR MaLR 156 446 -149 1345 215 37 6 chr20 17058395 17058749 -55095133 + Charlie1 DNA MER1_type 2233 2597 -164 2339 94 3 0 chr20 17058750 17059058 -55094824 - AluSg SINE Alu -1 309 1 329 111 0 0 chr20 17059074 17059128 -55094754 - L1MB7 LINE L1 -19 6165 6112 2542 161 32 0 chr20 17059164 17059629 -55094253 - L1MB7 LINE L1 -58 6126 5647 308 236 149 0 chr20 17059634 17059782 -55094100 + Charlie1 DNA MER1_type 2592 2761 0 316 305 19 19 chr20 17061039 17061144 -55092738 + MIR SINE MIR 36 140 -122 21 36 0 0 chr20 17061848 17061876 -55092006 + AT_rich Low_complexity Low_complexity 1 28 0 192 40 0 0 chr20 17062982 17063007 -55090875 + (TC)n Simple_repeat Simple_repeat 2 26 0 224 196 18 18 chr20 17063018 17063074 -55090808 + L2 LINE L2 3258 3313 0 2091 91 24 7 chr20 17063253 17063540 -55090342 - AluSc SINE Alu -12 297 6 596 187 86 36 chr20 17063540 17063679 -55090203 - AluSg SINE Alu -164 146 1 205 297 103 122 chr20 17063742 17064062 -55089820 + L3 LINE CR1 848 1161 -416 203 59 0 29 chr20 17064062 17064096 -55089786 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 41779 35 5 2 chr20 17064096 17069920 -55083962 - L1PA3 LINE L1 -24 6131 293 634 37 0 12 chr20 17069920 17070001 -55083881 - L1PA3 LINE L1 -6065 81 2 233 248 38 48 chr20 17070001 17070106 -55083776 + L3 LINE CR1 1153 1256 -321 2066 130 3 0 chr20 17070109 17070401 -55083481 - AluSc SINE Alu -14 295 3 202 333 0 0 chr20 17070455 17070515 -55083367 + (TA)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr20 17070581 17070602 -55083280 + AT_rich Low_complexity Low_complexity 1 21 0 252 234 22 66 chr20 17072134 17072271 -55081611 + L1MC5 LINE L1 7261 7391 -570 358 272 121 39 chr20 17072352 17072690 -55081192 + L1MC5 LINE L1 7552 7917 -44 240 162 0 0 chr20 17073118 17073155 -55080727 - MER94 DNA DNA -97 37 1 180 125 0 0 chr20 17073922 17073954 -55079928 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 421 311 20 13 chr20 17074376 17074527 -55079355 - MIR3 SINE MIR -2 206 55 2498 67 0 0 chr20 17074637 17074936 -55078946 + AluY SINE Alu 1 299 -12 500 0 17 0 chr20 17076680 17076740 -55077142 + (TG)n Simple_repeat Simple_repeat 2 62 0 1623 164 0 38 chr20 17076742 17077034 -55076848 - AluJb SINE Alu -31 281 1 575 254 113 19 chr20 17077319 17077532 -55076350 + LTR33A LTR ERVL 289 521 -2 390 328 185 28 chr20 17077537 17078452 -55075430 + L2 LINE L2 1472 2529 -785 402 324 54 31 chr20 17078694 17078916 -55074966 - MLT1K LTR MaLR -160 428 202 560 286 122 14 chr20 17079876 17080089 -55073793 - MIR SINE MIR -25 237 2 864 200 0 12 chr20 17080111 17080271 -55073611 + FRAM SINE Alu 1 158 -18 455 329 57 0 chr20 17080997 17081137 -55072745 + L2 LINE L2 3118 3265 -7 21 36 0 0 chr20 17081330 17081358 -55072524 + AT_rich Low_complexity Low_complexity 1 28 0 2062 114 0 0 chr20 17081492 17081764 -55072118 + AluSg SINE Alu 21 292 -18 5792 103 32 1 chr20 17081790 17082972 -55070910 + L1PB1 LINE L1 4941 6151 0 21 0 0 0 chr20 17083025 17083046 -55070836 + AT_rich Low_complexity Low_complexity 1 21 0 667 298 110 56 chr20 17084171 17084983 -55068899 + L1MEd LINE L1 595 1479 -4831 378 0 0 0 chr20 17084987 17085029 -55068853 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3459 33 0 5 chr20 17085029 17085450 -55068432 - L1PA4 LINE L1 -16 6139 5721 799 21 0 0 chr20 17085452 17085547 -55068335 - L1P LINE L1 -3920 2226 2132 * 3534 30 12 0 chr20 17085542 17085968 -55067914 + L1P LINE L1 1718 2148 -3998 25 0 0 0 chr20 17086217 17086242 -55067640 + AT_rich Low_complexity Low_complexity 1 25 0 665 247 25 0 chr20 17088044 17088202 -55065680 - L2 LINE L2 0 3313 3152 239 133 22 0 chr20 17089930 17089975 -55063907 + (TTA)n Simple_repeat Simple_repeat 1 46 0 198 0 0 0 chr20 17091562 17091584 -55062298 + (A)n Simple_repeat Simple_repeat 1 22 0 5452 110 22 26 chr20 17091912 17092108 -55061774 - Tigger4(Zombi) DNA MER2_type -2 2729 2534 2093 103 11 0 chr20 17092108 17092409 -55061473 - AluSx SINE Alu 0 304 1 5452 110 22 26 chr20 17092409 17093069 -55060813 - Tigger4(Zombi) DNA MER2_type -197 2534 1875 628 146 0 0 chr20 17093073 17093162 -55060720 - Tigger4(Zombi) DNA MER2_type -2642 89 1 27 0 0 0 chr20 17093539 17093566 -55060316 + AT_rich Low_complexity Low_complexity 1 27 0 501 277 25 12 chr20 17095122 17095305 -55058577 + MIR SINE MIR 9 190 -63 2467 67 3 0 chr20 17095332 17095630 -55058252 - AluY SINE Alu -12 299 1 543 280 64 24 chr20 17096428 17096678 -55057204 + MIR SINE MIR 2 261 -1 21 36 0 0 chr20 17098138 17098166 -55055716 + AT_rich Low_complexity Low_complexity 1 28 0 233 345 18 67 chr20 17098928 17099093 -55054789 + L2 LINE L2 2935 3091 -181 233 143 0 20 chr20 17099142 17099191 -55054691 + (TA)n Simple_repeat Simple_repeat 1 48 0 2105 101 47 0 chr20 17099586 17099864 -55054018 - AluSg SINE Alu -19 291 1 6404 180 22 16 chr20 17099866 17101658 -55052224 - L1PA15 LINE L1 -13 6152 4333 2455 94 0 0 chr20 17101658 17101966 -55051916 - AluSg SINE Alu -2 308 1 6404 180 22 16 chr20 17101966 17102528 -55051354 - L1PA15 LINE L1 -1832 4333 3776 5318 37 0 3 chr20 17102528 17103171 -55050711 + L1PA4 LINE L1 5515 6155 0 478 271 51 86 chr20 17103175 17103430 -55050452 + L1MEd LINE L1 988 1233 -4886 379 269 38 68 chr20 17103475 17103739 -55050143 + HAL1 LINE L1 1396 1651 -856 23 0 0 0 chr20 17104087 17104110 -55049772 + AT_rich Low_complexity Low_complexity 1 23 0 507 266 29 7 chr20 17105215 17105354 -55048528 + MIR SINE MIR 6 147 -115 2451 144 40 12 chr20 17106492 17106986 -55046896 - L1MC2 LINE L1 -20 6324 5817 2480 63 0 16 chr20 17106986 17107302 -55046580 - AluY SINE Alu 0 311 1 13208 134 33 38 chr20 17107331 17108480 -55045402 + Tigger1 DNA MER2_type 1 1154 -1264 7537 27 1 2 chr20 17108480 17109574 -55044308 + L1PA4 LINE L1 5060 6155 0 13208 134 33 38 chr20 17109574 17110854 -55043028 + Tigger1 DNA MER2_type 1154 2418 0 2674 181 45 8 chr20 17110854 17111624 -55042258 - L1MC2 LINE L1 -543 5801 5007 1767 140 68 14 chr20 17111695 17111987 -55041895 - AluSx SINE Alu -4 308 1 255 248 46 45 chr20 17112071 17112182 -55041700 - L1ME LINE L1 -296 5825 5713 1464 78 11 0 chr20 17112189 17112380 -55041502 + AluY SINE Alu 112 304 -7 625 197 34 77 chr20 17112454 17112518 -55041364 - L1MC4 LINE L1 -75 7967 7902 198 0 0 0 chr20 17112518 17112540 -55041342 + (TC)n Simple_repeat Simple_repeat 2 23 0 625 197 34 77 chr20 17112540 17112709 -55041173 - L1MC4 LINE L1 -140 7902 7744 392 81 0 0 chr20 17112709 17112771 -55041111 + L1MC2 LINE L1 6282 6343 -1 429 239 136 19 chr20 17112778 17112933 -55040949 + L1MC4 LINE L1 7572 7744 -298 4240 116 106 98 chr20 17113016 17114385 -55039497 - pTR5 LTR ERV1 -1 2437 743 2095 163 64 8 chr20 17116501 17116893 -55036989 + MLT2D LTR ERVL 1 414 0 2333 82 27 0 chr20 17116915 17117209 -55036673 + AluSg SINE Alu 1 302 -8 1396 147 9 0 chr20 17117443 17117654 -55036228 - 7SLRNA srpRNA srpRNA -86 234 22 267 31 0 0 chr20 17117867 17117899 -55035983 + (T)n Simple_repeat Simple_repeat 1 32 0 4717 159 23 17 chr20 17118073 17119316 -55034566 - L1PB4 LINE L1 -7 6149 4905 230 282 233 0 chr20 17119381 17119484 -55034398 - MIR SINE MIR -110 152 26 9372 196 65 9 chr20 17119672 17125331 -55028551 + L1PB1 LINE L1 6 6498 -369 396 0 0 0 chr20 17125331 17125375 -55028507 + (TG)n Simple_repeat Simple_repeat 2 45 0 362 179 34 67 chr20 17125427 17125606 -55028276 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 182 167 28 28 chr20 17125655 17125727 -55028155 + (TA)n Simple_repeat Simple_repeat 2 73 0 2347 138 0 0 chr20 17125736 17126106 -55027776 + L1PB1 LINE L1 6498 6867 0 373 274 0 102 chr20 17126269 17126446 -55027436 + L1ME LINE L1 59 217 -5853 22 35 0 0 chr20 17126947 17126976 -55026906 + AT_rich Low_complexity Low_complexity 1 29 0 225 0 0 0 chr20 17127326 17127351 -55026531 + (T)n Simple_repeat Simple_repeat 1 25 0 241 319 157 19 chr20 17127907 17128117 -55025765 - MIR SINE MIR -10 252 14 701 238 52 75 chr20 17128586 17128713 -55025169 - MER46C DNA MER2_type 0 338 210 994 266 92 56 chr20 17128713 17129214 -55024668 - LTR33 LTR ERVL 0 521 3 701 238 52 75 chr20 17129214 17129393 -55024489 - MER46C DNA MER2_type -128 210 39 515 285 58 0 chr20 17129401 17129538 -55024344 - MIR SINE MIR -110 152 8 856 237 140 20 chr20 17130849 17131207 -55022675 + MLT1J1 LTR MaLR 44 444 -2 2200 73 28 17 chr20 17133313 17133601 -55020281 + AluSc SINE Alu 1 291 -18 241 259 138 26 chr20 17133931 17134047 -55019835 - L3 LINE CR1 -803 774 646 202 364 0 0 chr20 17134213 17134279 -55019603 + L2 LINE L2 3241 3306 -7 642 281 0 0 chr20 17134307 17134446 -55019436 - MER5A DNA MER1_type -3 186 48 847 218 99 15 chr20 17134467 17134669 -55019213 - MER20 DNA MER1_type 0 219 1 478 343 34 5 chr20 17134684 17134891 -55018991 + L3 LINE CR1 369 581 -996 225 188 0 16 chr20 17134987 17135051 -55018831 + LTR28 LTR ERV1 1 63 -957 2341 155 8 5 chr20 17135068 17135454 -55018428 + MER61D LTR ERV1 115 501 0 238 367 17 8 chr20 17135454 17135570 -55018312 + MER117 DNA MER1_type 49 165 -32 5566 222 170 9 chr20 17135851 17137630 -55016252 + L1M2 LINE L1 1 2065 -4784 1947 126 8 0 chr20 17137651 17137914 -55015968 - AluSq SINE Alu -16 297 33 21 71 0 0 chr20 17138745 17138787 -55015095 + AT_rich Low_complexity Low_complexity 1 42 0 2239 100 3 0 chr20 17138860 17139150 -55014732 - AluSg1 SINE Alu -15 294 4 311 292 74 21 chr20 17139898 17140141 -55013741 + L1ME LINE L1 5409 5664 -457 3033 68 9 20 chr20 17140160 17140598 -55013284 - L1PA13 LINE L1 0 6163 5731 546 289 48 24 chr20 17140817 17140983 -55012899 + MIR SINE MIR 65 234 -28 236 151 0 38 chr20 17141670 17141723 -55012159 + GA-rich Low_complexity Low_complexity 3 53 0 249 382 0 0 chr20 17141943 17142032 -55011850 + GA-rich Low_complexity Low_complexity 6 94 0 378 139 35 0 chr20 17142491 17142577 -55011305 + CT-rich Low_complexity Low_complexity 1 89 0 2281 97 3 0 chr20 17142932 17143222 -55010660 - AluSx SINE Alu -16 296 6 255 278 28 0 chr20 17144088 17144160 -55009722 + MLT1K LTR MaLR 513 586 -2 3901 110 52 54 chr20 17144527 17145283 -55008599 - LTR1 LTR ERV1 0 785 32 795 279 133 34 chr20 17146829 17147303 -55006579 + LTR33 LTR ERVL 1 521 0 362 286 32 42 chr20 17147696 17147885 -55005997 + MLT1K LTR MaLR 394 580 -8 198 0 0 0 chr20 17148710 17148732 -55005150 + (CCCCCT)n Simple_repeat Simple_repeat 2 23 0 970 231 160 16 chr20 17148739 17149233 -55004649 + L2 LINE L2 2677 3236 -77 2553 55 13 0 chr20 17149706 17150013 -55003869 + AluY SINE Alu 1 311 0 234 0 0 0 chr20 17150013 17150039 -55003843 + (TA)n Simple_repeat Simple_repeat 2 27 0 653 326 27 5 chr20 17150454 17150641 -55003241 - MIR3 SINE MIR 0 208 18 441 333 56 11 chr20 17152413 17152593 -55001289 - MER5A DNA MER1_type 0 189 2 207 100 0 0 chr20 17153551 17153581 -55000301 + (T)n Simple_repeat Simple_repeat 1 30 0 5092 132 16 10 chr20 17153592 17154424 -54999458 - L1PA16 LINE L1 -4 6162 5322 661 339 57 0 chr20 17154834 17155061 -54998821 - MIR SINE MIR -18 244 5 29 28 0 0 chr20 17155070 17155106 -54998776 + AT_rich Low_complexity Low_complexity 1 36 0 223 302 32 0 chr20 17155172 17155235 -54998647 + L2 LINE L2 3245 3309 -4 321 254 123 66 chr20 17155631 17155753 -54998129 - L2 LINE L2 -29 3284 3156 6293 130 14 13 chr20 17155759 17157650 -54996232 + L1PA12 LINE L1 4226 6117 -51 342 48 0 0 chr20 17157653 17157695 -54996187 - L1PA13 LINE L1 -49 6114 6073 188 335 156 22 chr20 17157770 17157949 -54995933 - L2 LINE L2 -223 3090 2888 4185 180 30 28 chr20 17158033 17159238 -54994644 + L1MB7 LINE L1 4964 6165 -19 1888 151 3 10 chr20 17159345 17159644 -54994238 + AluJo SINE Alu 1 297 -15 24 53 0 0 chr20 17159812 17159850 -54994032 + AT_rich Low_complexity Low_complexity 1 38 0 23 54 0 0 chr20 17160026 17160063 -54993819 + AT_rich Low_complexity Low_complexity 1 37 0 1163 161 31 0 chr20 17160580 17160803 -54993079 + L1MB3 LINE L1 5947 6176 -7 196 331 132 19 chr20 17161187 17161444 -54992438 + L3 LINE CR1 1109 1394 -183 485 286 136 12 chr20 17161608 17161856 -54992026 + MLT1H1 LTR MaLR 18 263 -292 207 0 0 0 chr20 17161963 17161986 -54991896 + (A)n Simple_repeat Simple_repeat 1 23 0 846 274 50 33 chr20 17161991 17162353 -54991529 - L1MC4a LINE L1 -1625 6183 5816 707 192 0 0 chr20 17162365 17162511 -54991371 - L1MA6 LINE L1 -5 6295 6150 632 321 47 46 chr20 17162584 17163097 -54990785 - L1MC4a LINE L1 -871 5275 4759 2195 95 3 47 chr20 17163097 17163414 -54990468 + AluSp SINE Alu 1 303 -10 632 321 47 46 chr20 17163414 17163770 -54990112 - L1MC4a LINE L1 -1387 4759 4405 338 224 0 0 chr20 17163785 17163852 -54990030 + MLT1H1 LTR MaLR 489 555 0 399 258 0 0 chr20 17165006 17165095 -54988787 + L1MCa LINE L1 517 605 -5821 660 276 33 6 chr20 17165102 17165283 -54988599 + L1MCa LINE L1 568 753 -5673 889 251 0 5 chr20 17165286 17165485 -54988397 + L1MCb LINE L1 620 817 -5228 15864 149 72 12 chr20 17165497 17168108 -54985774 + L1PBa LINE L1 3 2457 -4405 2289 113 0 0 chr20 17168108 17168409 -54985473 + AluSx SINE Alu 1 301 -11 15864 149 72 12 chr20 17168409 17170493 -54983389 + L1PBa LINE L1 2457 4993 -1869 2162 111 0 0 chr20 17170521 17170800 -54983082 + AluSg SINE Alu 1 279 -31 230 239 15 0 chr20 17170832 17170899 -54982983 + L1MCb LINE L1 1963 2030 -4534 465 176 386 0 chr20 17170904 17171057 -54982825 + L1MCb LINE L1 2097 2308 -4256 2234 89 4 0 chr20 17171109 17171389 -54982493 + AluSp SINE Alu 1 281 -32 2430 178 4 11 chr20 17171501 17171973 -54981909 - L1 LINE L1 -2153 3993 3525 1652 141 35 81 chr20 17171977 17172347 -54981535 + L1MC2 LINE L1 5991 6343 -1 216 175 0 0 chr20 17172440 17172480 -54981402 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 2231 98 3 20 chr20 17173024 17173329 -54980553 + AluSq SINE Alu 1 300 -13 279 373 15 20 chr20 17174083 17174287 -54979595 - L2 LINE L2 -962 2352 2150 272 27 27 0 chr20 17174355 17174392 -54979490 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 32 0 0 chr20 17174524 17174555 -54979327 + AT_rich Low_complexity Low_complexity 1 31 0 15283 165 38 18 chr20 17175147 17178731 -54975151 + L1MA4A LINE L1 10 3520 -3485 2389 168 6 56 chr20 17178731 17178820 -54975062 + L1PB4 LINE L1 5664 5756 -400 1947 104 3 63 chr20 17178820 17179137 -54974745 + AluSc SINE Alu 1 298 -11 2389 168 6 56 chr20 17179137 17179227 -54974655 + L1PB4 LINE L1 5756 5849 -307 2293 107 3 3 chr20 17179227 17179536 -54974346 + AluSc SINE Alu 1 309 0 2389 168 6 56 chr20 17179536 17179872 -54974010 + L1PB4 LINE L1 5849 6154 -2 15283 165 38 18 chr20 17179872 17181444 -54972438 + L1MA4A LINE L1 3520 5059 -1946 2298 124 0 3 chr20 17181444 17181758 -54972124 - AluSq SINE Alu 0 313 1 15283 165 38 18 chr20 17181758 17183446 -54970436 + L1MA4A LINE L1 5059 6994 -11 1834 168 34 0 chr20 17184536 17184833 -54969049 - AluJb SINE Alu -5 307 1 21 0 0 0 chr20 17184864 17184885 -54968997 + AT_rich Low_complexity Low_complexity 1 21 0 266 243 18 27 chr20 17185462 17185573 -54968309 + (TA)n Simple_repeat Simple_repeat 2 111 0 261 385 39 10 chr20 17185715 17185819 -54968063 - L2 LINE L2 -51 3221 3115 2279 60 3 81 chr20 17186001 17186333 -54967549 + AluY SINE Alu 1 306 -5 2318 107 0 0 chr20 17187986 17188284 -54965598 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 17188477 17188498 -54965384 + AT_rich Low_complexity Low_complexity 1 21 0 2613 58 0 0 chr20 17188592 17188901 -54964981 + AluY SINE Alu 1 309 -2 296 364 8 0 chr20 17190556 17190677 -54963205 + GA-rich Low_complexity Low_complexity 1 122 0 4196 132 27 38 chr20 17190931 17191666 -54962216 + L1PA16 LINE L1 5361 6087 -79 208 299 103 10 chr20 17193120 17193217 -54960665 + L2 LINE L2 3140 3245 -27 487 213 118 29 chr20 17193237 17193373 -54960509 - MIR SINE MIR -1 261 114 567 312 70 26 chr20 17193383 17193630 -54960252 + MIR SINE MIR 1 255 -7 221 271 213 16 chr20 17193734 17193856 -54960026 + MER5A DNA MER1_type 44 189 0 2447 43 13 7 chr20 17194369 17194672 -54959210 - AluY SINE Alu -6 305 1 233 354 90 42 chr20 17196091 17196235 -54957647 + L2 LINE L2 3121 3271 -1 22 0 0 0 chr20 17196827 17196849 -54957033 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr20 17197919 17197957 -54955925 + AT_rich Low_complexity Low_complexity 1 38 0 542 313 17 6 chr20 17198615 17198791 -54955091 + MIR SINE MIR 61 238 -24 545 266 117 33 chr20 17198878 17198938 -54954944 - MIR SINE MIR -16 246 192 2279 109 3 0 chr20 17198938 17199249 -54954633 - AluSq SINE Alu -1 312 1 545 266 117 33 chr20 17199249 17199402 -54954480 - MIR SINE MIR -70 192 15 220 281 151 68 chr20 17199408 17199554 -54954328 - MIR3 SINE MIR -36 172 15 1700 158 51 34 chr20 17200603 17200958 -54952924 - MER46B DNA MER2_type 0 236 1 454 241 167 31 chr20 17201257 17201419 -54952463 + MIR SINE MIR 5 188 -74 567 114 0 11 chr20 17201423 17201511 -54952371 + AluS SINE Alu 1 87 -225 4948 176 62 23 chr20 17201764 17201906 -54951976 - L1MA9 LINE L1 0 6312 6177 387 0 0 0 chr20 17201906 17201949 -54951933 + (TG)n Simple_repeat Simple_repeat 1 43 0 4948 176 62 23 chr20 17201949 17203226 -54950656 - L1MA9 LINE L1 -135 6177 4847 554 200 0 0 chr20 17203221 17203331 -54950551 + L1M1 LINE L1 2952 3061 -4504 * 1725 169 7 13 chr20 17203331 17203633 -54950249 + Tigger2 DNA MER2_type 2419 2718 0 553 187 37 0 chr20 17203642 17203749 -54950133 - MER33 DNA MER1_type -197 127 17 788 159 159 0 chr20 17204024 17204187 -54949695 - MER5A DNA MER1_type 0 189 1 362 312 37 0 chr20 17204212 17204321 -54949561 - MIR SINE MIR -111 151 39 394 125 0 0 chr20 17204334 17204390 -54949492 - AluS SINE Alu -243 57 2 260 232 0 0 chr20 17204406 17204488 -54949394 - L1M4 LINE L1 -1088 5058 4977 1870 219 28 101 chr20 17204522 17205023 -54948859 - L1M4 LINE L1 -1799 4347 3912 1479 181 14 43 chr20 17205023 17205299 -54948583 - AluJo SINE Alu -16 296 29 1870 219 28 101 chr20 17205299 17205508 -54948374 - L1M4 LINE L1 -2234 3912 3689 2324 84 7 0 chr20 17205890 17206188 -54947694 - AluSc SINE Alu -9 300 1 1634 259 26 14 chr20 17206544 17206961 -54946921 - LTR16A LTR ERVL -10 440 19 691 266 139 19 chr20 17207039 17207298 -54946584 + L2 LINE L2 2977 3266 -47 460 186 14 27 chr20 17207482 17207621 -54946261 + MLT2B2 LTR ERVL 1 211 -203 388 152 88 96 chr20 17207623 17207748 -54946134 + MLT2D LTR ERVL 291 414 0 1740 169 7 16 chr20 17207772 17208080 -54945802 + AluJo SINE Alu 1 305 -7 1429 167 13 80 chr20 17208365 17208564 -54945318 + AluJo SINE Alu 1 173 -139 2440 67 3 0 chr20 17208564 17208863 -54945019 - AluY SINE Alu -11 300 1 1429 167 13 80 chr20 17208863 17208974 -54944908 + AluJo SINE Alu 173 290 -22 1091 179 27 31 chr20 17209567 17209791 -54944091 + AluJo SINE Alu 87 309 -3 2330 85 10 7 chr20 17210141 17210447 -54943435 - AluSg1 SINE Alu -2 307 1 9960 136 18 9 chr20 17210684 17212286 -54941596 - Tigger1 DNA MER2_type 0 2418 802 270 291 13 0 chr20 17212887 17212966 -54940916 + CT-rich Low_complexity Low_complexity 2 81 0 4492 125 23 91 chr20 17213383 17214253 -54939629 - Tigger1 DNA MER2_type -1606 812 2 1981 158 16 47 chr20 17214260 17214641 -54939241 + MLT1B LTR MaLR 22 390 0 258 105 0 0 chr20 17214819 17214857 -54939025 + (CAATC)n Simple_repeat Simple_repeat 2 39 0 358 227 56 71 chr20 17215023 17215221 -54938661 + L1ME4a LINE L1 5872 6066 -55 3562 171 31 35 chr20 17215392 17216130 -54937752 - L1MB5 LINE L1 -10 6164 5430 443 283 178 11 chr20 17218326 17218521 -54935361 - MIR SINE MIR -4 258 34 444 373 6 0 chr20 17219316 17219493 -54934389 + MIR3 SINE MIR 20 197 -11 5717 80 26 20 chr20 17219697 17220013 -54933869 - L1PA8A LINE L1 -30 6101 5788 220 51 26 26 chr20 17220013 17220052 -54933830 + (TA)n Simple_repeat Simple_repeat 2 40 0 5717 80 26 20 chr20 17220052 17220472 -54933410 - L1PA8A LINE L1 -343 5788 5357 2236 115 0 13 chr20 17220472 17220786 -54933096 - AluSq SINE Alu -3 310 1 5717 80 26 20 chr20 17220786 17220891 -54932991 - L1PA8A LINE L1 -774 5357 5254 2257 116 0 7 chr20 17221243 17221553 -54932329 + AluSq SINE Alu 1 308 -5 2339 95 0 7 chr20 17221565 17221870 -54932012 + AluSx SINE Alu 1 303 -9 533 182 20 0 chr20 17222572 17222671 -54931211 - MLT1E3 LTR MaLR 0 624 524 393 203 143 60 chr20 17222759 17222892 -54930990 - MLT1E1 LTR MaLR -510 144 1 193 330 138 0 chr20 17223296 17223390 -54930492 - L2 LINE L2 -14 3299 3193 2439 77 0 0 chr20 17223629 17223926 -54929956 - AluSc SINE Alu -12 297 1 21 71 0 0 chr20 17224147 17224189 -54929693 + AT_rich Low_complexity Low_complexity 1 42 0 379 299 56 0 chr20 17224296 17224403 -54929479 - L2 LINE L2 0 3272 3160 25 31 0 0 chr20 17226782 17226814 -54927068 + AT_rich Low_complexity Low_complexity 1 32 0 21 57 0 0 chr20 17228075 17228110 -54925772 + AT_rich Low_complexity Low_complexity 1 35 0 19836 154 48 12 chr20 17228197 17235620 -54918262 - L1MA2 LINE L1 0 7723 24 25 0 0 0 chr20 17235625 17235650 -54918232 + AT_rich Low_complexity Low_complexity 1 25 0 236 261 155 31 chr20 17236497 17236658 -54917224 + L1ME LINE L1 5408 5588 -533 280 246 0 15 chr20 17236658 17236723 -54917159 + (TG)n Simple_repeat Simple_repeat 2 65 0 688 278 40 5 chr20 17236729 17236952 -54916930 + L1ME LINE L1 5592 5822 -299 2395 88 0 3 chr20 17238411 17238719 -54915163 + AluSc SINE Alu 1 307 -2 25 0 0 0 chr20 17239269 17239294 -54914588 + AT_rich Low_complexity Low_complexity 1 25 0 459 311 25 0 chr20 17239317 17239436 -54914446 + L2 LINE L2 3188 3309 -4 23 0 0 0 chr20 17239668 17239691 -54914191 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr20 17239814 17239853 -54914029 + AT_rich Low_complexity Low_complexity 1 39 0 208 53 53 0 chr20 17239853 17239891 -54913991 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 508 99 56 12 chr20 17239903 17240065 -54913817 + (TA)n Simple_repeat Simple_repeat 2 170 0 44 20 0 0 chr20 17240065 17240116 -54913766 + AT_rich Low_complexity Low_complexity 1 51 0 1538 253 89 45 chr20 17240875 17241423 -54912459 + L1ME3A LINE L1 5474 6058 -112 2390 86 0 0 chr20 17241423 17241715 -54912167 - AluSg SINE Alu -18 292 1 1538 253 89 45 chr20 17241715 17241831 -54912051 + L1ME3A LINE L1 6058 6167 -3 601 283 23 74 chr20 17242578 17242693 -54911189 - MIR SINE MIR -8 254 135 1953 128 52 6 chr20 17242693 17243038 -54910844 + MER46B DNA MER2_type 1 236 0 601 283 23 74 chr20 17243038 17243180 -54910702 - MIR SINE MIR -127 135 10 1853 158 20 7 chr20 17244050 17244348 -54909534 + AluSx SINE Alu 1 302 -10 366 247 0 34 chr20 17245154 17245243 -54908639 + MIR SINE MIR 56 141 -121 295 350 43 21 chr20 17246116 17246302 -54907580 - L2 LINE L2 -1285 2029 1840 213 292 99 109 chr20 17246588 17246780 -54907102 + L2 LINE L2 2632 2821 -493 1656 179 3 27 chr20 17247326 17247622 -54906260 + AluJo SINE Alu 1 289 -23 334 303 126 11 chr20 17247912 17248087 -54905795 - MIR SINE MIR -4 258 64 2377 204 7 76 chr20 17248366 17249077 -54904805 + L1MD2 LINE L1 5314 5935 -255 1629 153 44 26 chr20 17249087 17249427 -54904455 - L1MA7 LINE L1 -6 6285 5940 2476 149 39 5 chr20 17249431 17250008 -54903874 + L1M2 LINE L1 5115 5714 -577 692 240 64 80 chr20 17250026 17250123 -54903759 + L1MD2 LINE L1 5921 6018 -341 2344 94 0 0 chr20 17250123 17250420 -54903462 - AluSg SINE Alu -13 297 1 692 240 64 80 chr20 17250420 17250635 -54903247 + L1MD2 LINE L1 6018 6228 -131 * 973 151 104 0 chr20 17250629 17250821 -54903061 + L1PA16 LINE L1 5938 6149 -17 390 246 108 0 chr20 17250835 17250965 -54902917 + L1MD2 LINE L1 6214 6357 -2 214 300 146 27 chr20 17252098 17252208 -54901674 + L3 LINE CR1 1231 1353 -224 244 263 26 9 chr20 17252219 17252333 -54901549 + (TA)n Simple_repeat Simple_repeat 2 117 0 2414 77 0 3 chr20 17252365 17252663 -54901219 - AluSc SINE Alu -11 298 2 22 0 0 0 chr20 17252668 17252690 -54901192 + AT_rich Low_complexity Low_complexity 1 22 0 263 229 36 6 chr20 17252694 17252860 -54901022 + (TA)n Simple_repeat Simple_repeat 2 172 0 2073 124 3 10 chr20 17253302 17253600 -54900282 - AluSx SINE Alu -16 296 1 1177 215 124 43 chr20 17253784 17254156 -54899726 + MER92B LTR ERV1 2 403 -233 464 213 0 0 chr20 17254175 17254269 -54899613 + MER92B LTR ERV1 543 636 0 25 0 0 0 chr20 17254451 17254476 -54899406 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr20 17254916 17254944 -54898938 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr20 17255108 17255138 -54898744 + AT_rich Low_complexity Low_complexity 1 30 0 1716 113 0 128 chr20 17255537 17255872 -54898010 - AluSx SINE Alu -10 292 1 2217 58 65 3 chr20 17256621 17256912 -54896970 - AluY SINE Alu 0 311 3 413 273 55 0 chr20 17257093 17257203 -54896679 + MIR SINE MIR 11 126 -136 2196 101 31 0 chr20 17257275 17257563 -54896319 - AluSq SINE Alu -16 297 1 30 27 0 0 chr20 17257662 17257699 -54896183 + AT_rich Low_complexity Low_complexity 1 37 0 2264 83 0 49 chr20 17258221 17258545 -54895337 + AluSc SINE Alu 1 308 -1 1678 201 64 39 chr20 17259279 17259732 -54894150 - MER31B LTR ERV1 0 661 1 959 186 16 78 chr20 17259765 17260007 -54893875 - MER31B-int LTR ERV1 -370 4566 4340 292 210 136 12 chr20 17260018 17260099 -54893783 - LTR37A LTR ERV1 -335 91 1 1645 158 48 41 chr20 17260118 17260247 -54893635 - MER31B-int LTR ERV1 -727 4209 4082 2474 82 0 0 chr20 17260247 17260551 -54893331 - AluY SINE Alu -7 304 1 1645 158 48 41 chr20 17260551 17260737 -54893145 - MER31B-int LTR ERV1 -854 4082 3892 371 191 0 0 chr20 17260745 17260808 -54893074 - Charlie3 DNA MER1_type -21 2689 2627 247 209 0 0 chr20 17260805 17260848 -54893034 - Charlie3 DNA MER1_type -2612 98 56 * 12310 193 84 76 chr20 17260864 17262005 -54891877 - MER31B-int LTR ERV1 -1032 3904 2774 2305 92 0 3 chr20 17262005 17262311 -54891571 + AluSq SINE Alu 1 305 -8 12310 193 84 76 chr20 17262311 17262511 -54891371 - MER31B-int LTR ERV1 -2162 2774 2577 2535 70 3 0 chr20 17262511 17262823 -54891059 + AluSp SINE Alu 1 313 0 12310 193 84 76 chr20 17262823 17264034 -54889848 - MER31B-int LTR ERV1 -2359 2577 1377 1757 129 3 93 chr20 17264034 17264344 -54889538 - AluJb SINE Alu -30 282 1 12310 193 84 76 chr20 17264344 17265255 -54888627 - MER31B-int LTR ERV1 -3559 1377 402 3876 185 35 1 chr20 17265255 17265963 -54887919 - MER44D DNA MER2_type -1 604 1 12310 193 84 76 chr20 17265963 17266355 -54887527 - MER31B-int LTR ERV1 -4534 402 15 1670 189 102 50 chr20 17266405 17266847 -54887035 - MER31B LTR ERV1 0 543 1 632 233 70 54 chr20 17267053 17267311 -54886571 + LTR37A LTR ERV1 43 304 -122 2238 116 3 0 chr20 17267366 17267659 -54886223 - AluSx SINE Alu -18 294 1 2393 71 3 0 chr20 17267764 17268059 -54885823 - AluY SINE Alu -15 296 1 576 250 45 34 chr20 17268069 17268245 -54885637 - MIR SINE MIR -43 219 42 190 279 213 0 chr20 17268272 17268333 -54885549 - MIR SINE MIR -185 77 4 890 138 0 0 chr20 17268802 17268925 -54884957 - FLAM_C SINE Alu -20 123 1 2419 85 0 0 chr20 17269153 17269460 -54884422 + AluY SINE Alu 1 307 -4 325 151 27 14 chr20 17269682 17269755 -54884127 + MLT1H LTR MaLR 471 544 -5 189 0 0 0 chr20 17270368 17270389 -54883493 + (CA)n Simple_repeat Simple_repeat 2 22 0 512 222 248 36 chr20 17270562 17270923 -54882959 - MLT1H LTR MaLR -12 583 119 609 270 60 75 chr20 17271199 17271451 -54882431 - MER102a DNA MER1_type -15 315 68 1963 125 7 0 chr20 17271466 17271774 -54882108 + AluSx SINE Alu 1 310 0 182 314 96 32 chr20 17271988 17272144 -54881738 + L2 LINE L2 2888 3053 -219 445 258 65 32 chr20 17272768 17272892 -54880990 - MIR SINE MIR -133 129 2 2279 95 3 0 chr20 17273293 17273589 -54880293 + AluSc SINE Alu 2 298 -11 2349 82 0 3 chr20 17273602 17273907 -54879975 + AluY SINE Alu 1 304 -7 374 302 126 5 chr20 17273957 17274172 -54879710 - MER112 DNA MER1_type -12 248 8 373 240 0 0 chr20 17274702 17274777 -54879105 - MIR SINE MIR -121 141 67 819 251 76 5 chr20 17274929 17275140 -54878742 + MIR SINE MIR 26 251 -11 584 348 182 15 chr20 17276006 17276650 -54877232 - L2 LINE L2 -646 2668 1901 1244 121 226 46 chr20 17276650 17276689 -54877193 - MER46B DNA MER2_type -2495 236 205 1924 150 3 0 chr20 17276689 17276975 -54876907 + AluJb SINE Alu 4 290 -22 1244 121 226 46 chr20 17276975 17277241 -54876641 - MER46B DNA MER2_type -2526 205 1 584 348 182 15 chr20 17277241 17277282 -54876600 - L2 LINE L2 -1413 1901 1868 263 308 88 50 chr20 17277324 17277506 -54876376 + MLT1J2 LTR MaLR 256 444 -6 217 267 107 61 chr20 17277928 17278059 -54875823 + L2 LINE L2 2456 2592 -722 263 329 102 0 chr20 17278113 17278250 -54875632 + L2 LINE L2 2862 3012 -260 223 346 74 31 chr20 17278301 17278463 -54875419 + L2 LINE L2 3140 3308 -5 437 293 38 25 chr20 17280101 17280258 -54873624 + L2 LINE L2 223 381 -2933 238 186 0 129 chr20 17280479 17280549 -54873333 + MLT1J LTR MaLR 342 402 -109 586 322 150 10 chr20 17280742 17281056 -54872826 + L2 LINE L2 2955 3312 -1 587 286 148 24 chr20 17281067 17281399 -54872483 + L2 LINE L2 2939 3311 -2 2467 81 0 10 chr20 17281771 17282081 -54871801 + AluSc SINE Alu 1 307 -2 206 254 0 30 chr20 17282187 17282254 -54871628 + A-rich Low_complexity Low_complexity 2 66 0 28 0 0 0 chr20 17282422 17282450 -54871432 + AT_rich Low_complexity Low_complexity 1 28 0 1898 231 68 84 chr20 17282491 17283696 -54870186 - L1ME3A LINE L1 -9 6161 4897 346 333 87 36 chr20 17283815 17284262 -54869620 + L1M4 LINE L1 2574 3043 -3103 289 313 109 34 chr20 17284770 17284917 -54868965 - L2 LINE L2 0 3272 3115 23 33 0 0 chr20 17285175 17285205 -54868677 + AT_rich Low_complexity Low_complexity 1 30 0 312 301 48 63 chr20 17285920 17286126 -54867756 + L2 LINE L2 1868 2070 -1244 21 36 0 0 chr20 17286643 17286671 -54867211 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 17286823 17286851 -54867031 + AT_rich Low_complexity Low_complexity 1 28 0 204 219 0 0 chr20 17287616 17287657 -54866225 + A-rich Low_complexity Low_complexity 5 45 0 24 32 0 0 chr20 17288281 17288312 -54865570 + AT_rich Low_complexity Low_complexity 1 31 0 377 314 174 4 chr20 17289498 17289734 -54864148 - L1MC4a LINE L1 -1746 6062 5787 344 308 119 63 chr20 17289793 17290142 -54863740 - L1MEd LINE L1 -1329 1161 824 2280 84 0 10 chr20 17290608 17290906 -54862976 - AluSq SINE Alu -13 300 6 2034 106 6 48 chr20 17290943 17291254 -54862628 - AluSq SINE Alu -15 298 1 204 67 0 0 chr20 17291508 17291538 -54862344 + (T)n Simple_repeat Simple_repeat 1 30 0 26 30 0 0 chr20 17292046 17292079 -54861803 + AT_rich Low_complexity Low_complexity 1 33 0 350 330 47 60 chr20 17292104 17292165 -54861717 - HAL1 LINE L1 -877 1630 1570 2371 161 19 30 chr20 17292165 17292631 -54861251 + LOR1b LTR ERV1 1 461 0 350 330 47 60 chr20 17292631 17292802 -54861080 - HAL1 LINE L1 -937 1570 1401 331 274 81 24 chr20 17292910 17293034 -54860848 - L1MEd LINE L1 -4964 1155 1025 2403 80 0 32 chr20 17293237 17293548 -54860334 - AluSg SINE Alu -9 301 1 282 309 71 27 chr20 17293609 17293864 -54860018 - L1ME3A LINE L1 -222 5948 5681 310 220 35 165 chr20 17293883 17293955 -54859927 - MER112 DNA MER1_type -6 254 174 378 0 0 0 chr20 17293955 17293997 -54859885 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 310 220 35 165 chr20 17293997 17294124 -54859758 - MER112 DNA MER1_type -86 174 81 431 313 75 0 chr20 17294164 17294324 -54859558 - L1ME3A LINE L1 -514 5648 5477 226 224 20 0 chr20 17294453 17294502 -54859380 + HSMAR1 DNA Mariner 747 796 -491 1016 290 107 46 chr20 17294578 17295360 -54858522 - L1MEd LINE L1 -4875 1244 415 3883 98 159 111 chr20 17295364 17296694 -54857188 + pTR5 LTR ERV1 742 2438 0 260 197 49 0 chr20 17296721 17296782 -54857100 - L1MEd LINE L1 -5732 387 324 2775 187 74 135 chr20 17296789 17297493 -54856389 + MER21A LTR ERV1 12 757 -174 1938 163 0 3 chr20 17297493 17297794 -54856088 + AluJo SINE Alu 1 300 -12 2775 187 74 135 chr20 17297794 17297913 -54855969 + MER21A LTR ERV1 757 770 -161 1888 141 20 23 chr20 17297913 17298212 -54855670 + AluSx SINE Alu 1 298 -14 2775 187 74 135 chr20 17298212 17298360 -54855522 + MER21A LTR ERV1 770 925 -6 304 285 252 33 chr20 17298499 17298741 -54855141 - HAL1 LINE L1 -1387 1120 826 2733 139 78 95 chr20 17299858 17300144 -54853738 + MER7C DNA MER2_type 1 290 -2738 1155 80 0 0 chr20 17300144 17300294 -54853588 + L1PB1 LINE L1 5996 6145 -6 2733 139 78 95 chr20 17300294 17300619 -54853263 + MER7C DNA MER2_type 290 602 0 963 223 42 0 chr20 17302188 17302381 -54851501 + MIR SINE MIR 41 241 -21 2239 92 3 7 chr20 17302404 17302698 -54851184 - AluSx SINE Alu -17 295 3 941 178 62 40 chr20 17302753 17302978 -54850904 - AluJo SINE Alu -81 231 2 1055 171 6 0 chr20 17303837 17304018 -54849864 + AluJb SINE Alu 88 269 -43 263 258 141 55 chr20 17304268 17304396 -54849486 + MER5A DNA MER1_type 47 185 -4 195 328 0 0 chr20 17304370 17304431 -54849451 - L2 LINE L2 -7 3265 3205 * 2505 54 0 0 chr20 17304557 17304852 -54849030 - AluY SINE Alu -16 295 1 240 309 12 0 chr20 17305436 17305520 -54848362 + L1MC4a LINE L1 4080 4164 -1982 370 153 97 0 chr20 17305947 17306019 -54847863 + MIR SINE MIR 183 261 -1 440 289 86 39 chr20 17306085 17306439 -54847443 + L1MC4a LINE L1 5456 5739 -382 2322 62 0 10 chr20 17306439 17306757 -54847125 + AluY SINE Alu 1 311 0 440 289 86 39 chr20 17306757 17306844 -54847038 + L1MC4a LINE L1 5739 5820 -301 602 281 138 0 chr20 17307801 17308004 -54845878 - MIR SINE MIR -21 241 11 442 308 117 29 chr20 17308048 17308596 -54845286 + L1ME LINE L1 5272 5855 -266 247 254 315 22 chr20 17308710 17308891 -54844991 + MIR SINE MIR 15 248 -14 192 77 0 0 chr20 17309945 17309971 -54843911 + (GGGA)n Simple_repeat Simple_repeat 2 27 0 1947 139 0 17 chr20 17310015 17310317 -54843565 + AluSx SINE Alu 13 309 -3 1411 204 4 22 chr20 17310375 17310644 -54843238 + AluJo SINE Alu 1 264 -48 385 329 84 32 chr20 17310939 17311188 -54842694 - L3 LINE CR1 -12 1565 1304 1276 234 67 46 chr20 17311391 17311852 -54842030 + HsTC2a DNA Tc2 11 481 -263 27196 115 34 71 chr20 17311855 17318264 -54835618 + L1PA10 LINE L1 12 6168 0 512 176 92 142 chr20 17318268 17318529 -54835353 + HsTC2a DNA Tc2 465 712 -30 482 241 8 77 chr20 17318592 17318798 -54835084 + MLT1J1 LTR MaLR 16 213 -237 316 233 48 10 chr20 17318935 17319038 -54834844 + MLT1J2 LTR MaLR 344 450 0 2524 63 0 0 chr20 17319426 17319728 -54834154 + AluY SINE Alu 3 304 -7 364 207 22 7 chr20 17319729 17319830 -54834052 + L1MB4 LINE L1 611 900 -5746 379 170 170 105 chr20 17319902 17320208 -54833674 + L1MB4 LINE L1 837 1162 -5380 2332 91 0 0 chr20 17320226 17320522 -54833360 - AluSp SINE Alu -17 296 1 2573 151 50 74 chr20 17320648 17321140 -54832742 + LTR8A LTR ERV1 83 556 -171 1972 129 7 14 chr20 17321140 17321435 -54832447 + AluY SINE Alu 1 293 -18 2573 151 50 74 chr20 17321435 17321603 -54832279 + LTR8A LTR ERV1 556 727 0 803 164 121 39 chr20 17321690 17321922 -54831960 + LTR45B LTR ERV1 225 475 -14 399 191 136 0 chr20 17321993 17322140 -54831742 + L1MB4 LINE L1 1229 1395 -5251 6902 207 100 20 chr20 17322149 17325116 -54828766 + L1MB4 LINE L1 3311 6537 -141 1475 199 27 17 chr20 17325116 17325413 -54828469 - AluJo SINE Alu -12 300 1 6902 207 100 20 chr20 17325413 17325568 -54828314 + L1MB4 LINE L1 6537 6678 0 1789 161 39 16 chr20 17325617 17325922 -54827960 + AluJb SINE Alu 1 312 0 1799 84 38 11 chr20 17326775 17327038 -54826844 + AluSq SINE Alu 37 306 -7 2513 63 0 0 chr20 17327141 17327443 -54826439 + AluY SINE Alu 1 302 -9 13819 125 53 25 chr20 17327446 17328508 -54825374 + Tigger2 DNA MER2_type 1 1031 -1687 1907 160 7 0 chr20 17328508 17328801 -54825081 + AluSx SINE Alu 3 297 -15 13819 125 53 25 chr20 17328801 17328884 -54824998 + Tigger2 DNA MER2_type 1031 1110 -1608 2349 67 0 7 chr20 17328884 17329182 -54824700 + AluY SINE Alu 1 296 -15 13819 125 53 25 chr20 17329182 17330531 -54823351 + Tigger2 DNA MER2_type 1110 2567 -151 7630 155 22 3 chr20 17330560 17332720 -54821162 - L1PA11 LINE L1 0 6174 3999 21 0 0 0 chr20 17332729 17332750 -54821132 + AT_rich Low_complexity Low_complexity 1 21 0 205 215 31 31 chr20 17333094 17333159 -54820723 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 209 274 20 0 chr20 17333296 17333347 -54820535 + GA-rich Low_complexity Low_complexity 5 56 0 819 201 73 19 chr20 17333374 17333650 -54820232 + L1MC5 LINE L1 6959 7247 -728 1506 191 35 85 chr20 17333782 17334406 -54819476 + L1MC5 LINE L1 7268 7860 -101 2022 156 12 6 chr20 17334415 17334761 -54819121 - MER7A DNA MER2_type 0 346 1 1912 136 7 14 chr20 17334815 17335110 -54818772 + AluSx SINE Alu 4 296 -16 25 31 0 0 chr20 17336015 17336047 -54817835 + AT_rich Low_complexity Low_complexity 1 32 0 1210 147 118 0 chr20 17336493 17336704 -54817178 + MER46A DNA MER2_type 1 236 0 239 231 165 74 chr20 17336769 17336890 -54816992 - MIR3 SINE MIR -71 137 6 1709 161 67 85 chr20 17338728 17339164 -54814718 + MSTA LTR MaLR 1 428 0 531 234 133 37 chr20 17339383 17339571 -54814311 - MIR SINE MIR -12 250 45 732 287 118 22 chr20 17339912 17340414 -54813468 + Charlie7 DNA MER1_type 12 561 -2051 1160 79 0 0 chr20 17340690 17340830 -54813052 - AluSc SINE Alu -20 289 150 209 176 0 0 chr20 17340987 17341021 -54812861 + MIR SINE MIR 95 128 -134 * 489 242 81 34 chr20 17341019 17341168 -54812714 - MIR SINE MIR -91 171 16 450 245 29 0 chr20 17341194 17341296 -54812586 + MIR SINE MIR 158 262 0 2242 100 0 3 chr20 17341739 17342039 -54811843 - AluSg SINE Alu -11 299 1 28 0 0 0 chr20 17342847 17342875 -54811007 + AT_rich Low_complexity Low_complexity 1 28 0 204 296 12 12 chr20 17344674 17344755 -54809127 + (CG)n Simple_repeat Simple_repeat 1 81 0 307 306 97 21 chr20 17344755 17344899 -54808983 + L1MDb LINE L1 541 695 -5714 332 292 44 84 chr20 17345311 17345561 -54808321 - L1M2 LINE L1 -5826 1023 784 1903 123 58 3 chr20 17346392 17346684 -54807198 - AluSq SINE Alu -5 308 1 198 245 0 20 chr20 17346722 17346771 -54807111 - L2 LINE L2 -208 3064 3017 519 309 143 41 chr20 17347286 17347677 -54806205 + L2 LINE L2 2325 2755 -559 989 199 112 64 chr20 17347687 17348044 -54805838 + MLT1A2 LTR MaLR 1 374 0 2370 98 0 0 chr20 17348196 17348491 -54805391 - AluSq SINE Alu -18 295 1 208 315 18 45 chr20 17348540 17348651 -54805231 + L2 LINE L2 2988 3095 -218 1813 156 0 48 chr20 17348688 17349002 -54804880 - AluSx SINE Alu -13 299 1 1332 203 103 32 chr20 17349006 17349376 -54804506 + MLT1D LTR MaLR 108 503 -2 473 167 0 0 chr20 17350817 17350889 -54802993 + tRNA-Glu-GAG tRNA tRNA 1 72 -3 4464 179 30 78 chr20 17350911 17351671 -54802211 + L1MB5 LINE L1 3802 4597 -1577 2041 113 3 11 chr20 17351671 17351982 -54801900 - AluSq SINE Alu 0 311 3 4464 179 30 78 chr20 17351982 17352375 -54801507 + L1MB5 LINE L1 4597 5007 -1167 687 191 0 50 chr20 17352375 17352516 -54801366 + AluJo SINE Alu 1 134 -178 4464 179 30 78 chr20 17352516 17353065 -54800817 + L1MB5 LINE L1 5007 5581 -593 2266 92 0 16 chr20 17353065 17353368 -54800514 + AluSc SINE Alu 1 298 -11 4464 179 30 78 chr20 17353368 17353532 -54800350 + L1MB5 LINE L1 5581 5751 -423 457 56 11 124 chr20 17353532 17353582 -54800300 - MADE1 DNA Mariner 0 80 43 2389 68 3 0 chr20 17353582 17353875 -54800007 + AluY SINE Alu 1 294 -17 457 56 11 124 chr20 17353875 17353913 -54799969 - MADE1 DNA Mariner -37 43 2 4464 179 30 78 chr20 17353913 17354474 -54799408 + L1MB5 LINE L1 5751 6168 -6 2512 169 61 6 chr20 17354478 17355017 -54798865 + L1MB8 LINE L1 5550 6118 -60 299 335 123 70 chr20 17355026 17355571 -54798311 - L2 LINE L2 -12 3260 2688 1981 122 21 3 chr20 17355571 17355906 -54797976 + L1MA5 LINE L1 5960 6300 0 215 100 0 25 chr20 17355999 17356039 -54797843 + (GGGGA)n Simple_repeat Simple_repeat 5 43 0 207 162 0 0 chr20 17356031 17356068 -54797814 + GA-rich Low_complexity Low_complexity 2 38 0 * 223 368 85 0 chr20 17356105 17356211 -54797671 - L2 LINE L2 -665 2649 2535 * 282 304 104 76 chr20 17356178 17356401 -54797481 - L2 LINE L2 -1226 2088 1854 2213 99 14 0 chr20 17356401 17356693 -54797189 + AluSx SINE Alu 1 296 -16 282 304 104 76 chr20 17356693 17356758 -54797124 - L2 LINE L2 -1460 1854 1792 2305 105 3 3 chr20 17356892 17357205 -54796677 + AluSp SINE Alu 1 313 0 2419 82 3 3 chr20 17357664 17357968 -54795914 - AluSc SINE Alu -5 304 1 1844 177 7 0 chr20 17358184 17358484 -54795398 - AluJo SINE Alu -10 302 1 5433 170 22 89 chr20 17359122 17359444 -54794438 - L1MA7 LINE L1 -5 6286 5944 2205 107 3 16 chr20 17359444 17359752 -54794130 - AluSq SINE Alu -9 304 1 5433 170 22 89 chr20 17359752 17360205 -54793677 - L1MA7 LINE L1 -347 5944 5463 2121 104 29 0 chr20 17360205 17360485 -54793397 + AluSx SINE Alu 1 288 -24 5433 170 22 89 chr20 17360485 17361161 -54792721 - L1MA7 LINE L1 -828 5463 5050 4216 135 29 52 chr20 17361161 17361624 -54792258 - L1MA5 LINE L1 0 6300 5865 1972 151 3 10 chr20 17361624 17361936 -54791946 - AluSx SINE Alu 0 312 3 4216 135 29 52 chr20 17361936 17362333 -54791549 - L1MA5 LINE L1 -435 5865 5460 5433 170 22 89 chr20 17362333 17362904 -54790978 - L1MA7 LINE L1 -1241 5050 4443 230 308 169 30 chr20 17363327 17363564 -54790318 + L2 LINE L2 2025 2294 -1020 293 319 168 0 chr20 17363723 17363836 -54790046 - MIR3 SINE MIR -37 171 40 2141 101 0 0 chr20 17364415 17364720 -54789162 + AluSc SINE Alu 3 307 0 766 149 0 57 chr20 17364727 17364868 -54789014 + FLAM_C SINE Alu 11 143 0 220 333 73 49 chr20 17364949 17365072 -54788810 + L2 LINE L2 3142 3267 -5 21 57 0 0 chr20 17365148 17365183 -54788699 + AT_rich Low_complexity Low_complexity 1 35 0 2049 124 38 0 chr20 17365947 17366237 -54787645 + AluSx SINE Alu 3 303 -9 247 335 53 44 chr20 17366792 17367019 -54786863 + L1MEd LINE L1 445 673 -5446 516 167 0 0 chr20 17367307 17367397 -54786485 + U6 snRNA snRNA 18 107 0 927 263 67 68 chr20 17367450 17368210 -54785672 + HAL1 LINE L1 991 1749 -758 356 274 68 67 chr20 17368519 17368978 -54784904 + L1M3 LINE L1 4588 4993 -1175 1921 141 0 31 chr20 17368978 17369296 -54784586 + AluSx SINE Alu 1 309 0 356 274 68 67 chr20 17369296 17369752 -54784130 + L1M3 LINE L1 4993 5447 -721 28 71 0 0 chr20 17369802 17369858 -54784024 + AT_rich Low_complexity Low_complexity 1 56 0 2156 126 3 0 chr20 17369869 17370162 -54783720 - AluSq SINE Alu -19 294 1 356 310 22 30 chr20 17370181 17370413 -54783469 + L1MC/D LINE L1 5526 5755 -2053 229 303 0 15 chr20 17370863 17370929 -54782953 - L2 LINE L2 0 3313 3249 192 286 157 0 chr20 17371193 17371263 -54782619 - MIR SINE MIR -14 248 168 314 188 0 0 chr20 17372289 17372337 -54781545 - L2 LINE L2 -16 3256 3209 2310 110 0 3 chr20 17373532 17373833 -54780049 + AluSg SINE Alu 1 300 -10 355 224 51 31 chr20 17373923 17374021 -54779861 - MIR SINE MIR -66 196 97 2136 137 0 3 chr20 17374093 17374443 -54779439 + AluSx SINE Alu 1 349 0 1300 139 14 0 chr20 17374515 17374738 -54779144 + Tigger1 DNA MER2_type 1 226 -2192 2326 83 0 17 chr20 17374738 17375040 -54778842 - AluSc SINE Alu -12 297 1 2186 69 4 7 chr20 17375989 17376265 -54777617 + AluSp SINE Alu 31 305 -8 180 0 0 0 chr20 17376338 17376358 -54777524 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 759 197 27 84 chr20 17376362 17376539 -54777343 + MER115 DNA AcHobo 452 637 -3394 2046 122 0 14 chr20 17376539 17376834 -54777048 + AluSg SINE Alu 1 291 -19 759 197 27 84 chr20 17376834 17376913 -54776969 + MER115 DNA AcHobo 637 4030 -1 2236 115 3 0 chr20 17376973 17377278 -54776604 - AluSx SINE Alu -6 306 1 261 0 0 0 chr20 17377292 17377321 -54776561 + (T)n Simple_repeat Simple_repeat 1 29 0 2068 145 3 10 chr20 17377618 17377929 -54775953 - AluSg SINE Alu -1 309 1 760 201 121 69 chr20 17378076 17378552 -54775330 - MLT1H LTR MaLR -4 545 5 291 216 171 11 chr20 17379512 17379600 -54774282 + MIR SINE MIR 13 114 -148 233 173 62 12 chr20 17379785 17379866 -54774016 - Charlie7 DNA MER1_type -69 2543 2459 8925 85 18 14 chr20 17380830 17381773 -54772109 - HSMAR1 DNA Mariner 0 1287 336 2076 60 74 28 chr20 17381773 17382056 -54771826 - AluY SINE Alu -13 298 3 8925 85 18 14 chr20 17382056 17382386 -54771496 - HSMAR1 DNA Mariner -951 336 9 21 0 0 0 chr20 17382437 17382458 -54771424 + AT_rich Low_complexity Low_complexity 1 21 0 193 319 106 0 chr20 17382458 17382552 -54771330 - MIR SINE MIR -4 258 155 26 0 0 0 chr20 17382677 17382703 -54771179 + AT_rich Low_complexity Low_complexity 1 26 0 1743 178 3 3 chr20 17382825 17383118 -54770764 - AluJb SINE Alu -19 293 1 1882 161 7 3 chr20 17383311 17383616 -54770266 + AluSx SINE Alu 1 306 -6 24 0 0 0 chr20 17384546 17384570 -54769312 + AT_rich Low_complexity Low_complexity 1 24 0 190 71 0 0 chr20 17384765 17384793 -54769089 - L2 LINE L2 -1 3271 3244 520 70 0 0 chr20 17384865 17384936 -54768946 + MADE1 DNA Mariner 1 71 -9 1389 242 100 36 chr20 17385051 17385655 -54768227 + L2 LINE L2 2662 3313 0 202 53 0 53 chr20 17386145 17386183 -54767699 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1705 155 54 33 chr20 17386858 17387194 -54766688 - MER61A LTR ERV1 0 343 1 10659 89 60 11 chr20 17387194 17387743 -54766139 - MER61A-int LTR ERV1 0 5217 4697 1634 104 22 5 chr20 17387743 17387965 -54765917 - AluSc SINE Alu -83 226 1 10659 89 60 11 chr20 17387965 17388840 -54765042 - MER61A-int LTR ERV1 -520 4697 3699 195 100 0 0 chr20 17388840 17388870 -54765012 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 10659 89 60 11 chr20 17388870 17389086 -54764796 - MER61A-int LTR ERV1 -1518 3699 3495 1974 98 55 0 chr20 17389092 17389366 -54764516 - AluY SINE Alu -8 303 15 2690 39 0 3 chr20 17389406 17389718 -54764164 - AluY SINE Alu 0 311 1 557 260 373 17 chr20 17389762 17390282 -54763600 + L2 LINE L2 320 1024 -2290 3814 173 62 28 chr20 17390365 17391016 -54762866 - L1MB2 LINE L1 -7 6164 5464 2395 73 3 13 chr20 17391016 17391330 -54762552 - AluY SINE Alu 0 311 1 3814 173 62 28 chr20 17391330 17391711 -54762171 - L1MB2 LINE L1 -707 5464 5097 510 143 133 0 chr20 17391714 17391819 -54762063 + LOR1a LTR ERV1 3 121 -376 * 834 115 126 82 chr20 17391818 17392001 -54761881 + LOR1a LTR ERV1 307 497 0 2511 194 21 5 chr20 17392001 17392573 -54761309 - L1MB2 LINE L1 -1047 5099 4519 7830 177 102 19 chr20 17392586 17394205 -54759677 - MER52A LTR ERV1 0 1755 1 3347 186 22 67 chr20 17394205 17395173 -54758709 - L1MB2 LINE L1 -1637 4509 3586 195 42 0 0 chr20 17395211 17395235 -54758647 + (TA)n Simple_repeat Simple_repeat 2 25 0 686 226 51 14 chr20 17395325 17395542 -54758340 - MER46C DNA MER2_type -98 240 16 1054 269 29 101 chr20 17395560 17396046 -54757836 + L2 LINE L2 1044 1494 -1820 907 306 250 6 chr20 17396073 17396589 -54757293 + L2 LINE L2 2302 2943 -371 719 238 6 17 chr20 17396589 17396770 -54757112 + LTR28 LTR ERV1 1 179 -841 273 107 21 73 chr20 17396798 17396866 -54757016 + LTR27 LTR ERV1 266 320 -316 182 162 27 0 chr20 17397092 17397129 -54756753 + L2 LINE L2 3276 3313 0 821 178 159 0 chr20 17398148 17398311 -54755571 - MER5A DNA MER1_type 0 189 1 213 235 111 72 chr20 17399043 17399196 -54754686 + L2 LINE L2 2346 2504 -810 240 264 31 47 chr20 17399226 17399355 -54754527 - MER87 LTR ERV1 -20 521 395 1022 310 62 48 chr20 17399675 17399802 -54754080 + L2 LINE L2 2524 2648 -665 1797 97 131 0 chr20 17399802 17400061 -54753821 - AluSx SINE Alu -9 293 1 1022 310 62 48 chr20 17400061 17400708 -54753174 + L2 LINE L2 2648 3313 0 2356 109 0 0 chr20 17400746 17401050 -54752832 + AluSq SINE Alu 1 304 -9 2281 117 0 3 chr20 17401370 17401677 -54752205 + AluSg SINE Alu 1 306 -4 787 209 93 11 chr20 17401878 17402060 -54751822 - MIR SINE MIR 0 262 66 2417 103 0 0 chr20 17402334 17402644 -54751238 + AluSg SINE Alu 1 310 0 1601 156 145 16 chr20 17403070 17403443 -54750439 - MER61C LTR ERV1 0 434 14 3300 149 102 31 chr20 17403886 17404565 -54749317 - LTR8A LTR ERV1 0 727 1 870 277 151 28 chr20 17404747 17405461 -54748421 + L2 LINE L2 2499 3301 -12 285 305 32 0 chr20 17405745 17405840 -54748042 + MLT1J2 LTR MaLR 7 104 -346 2512 89 13 0 chr20 17405860 17406242 -54747640 + L1PB1 LINE L1 5415 5801 -350 355 130 65 0 chr20 17406242 17406365 -54747517 + (TA)n Simple_repeat Simple_repeat 2 132 0 2458 129 3 3 chr20 17406368 17406741 -54747141 + L1PB1 LINE L1 5779 6151 0 23 0 0 0 chr20 17406801 17406824 -54747058 + AT_rich Low_complexity Low_complexity 1 23 0 202 155 52 0 chr20 17406874 17406932 -54746950 + (CAAAG)n Simple_repeat Simple_repeat 2 62 0 428 208 25 67 chr20 17406961 17407081 -54746801 + MLT1J1 LTR MaLR 202 316 -130 1978 150 8 49 chr20 17407088 17407475 -54746407 + L1MB8 LINE L1 5802 6172 -6 1762 142 40 13 chr20 17407479 17407782 -54746100 - AluSx SINE Alu -1 311 1 2164 106 7 0 chr20 17407982 17408305 -54745577 + AluSx SINE Alu 1 325 0 1045 167 0 74 chr20 17409255 17409383 -54744499 - AluJo SINE Alu 0 313 208 2183 64 53 0 chr20 17409383 17409664 -54744218 + AluY SINE Alu 1 296 -15 1045 167 0 74 chr20 17409664 17409779 -54744103 - AluJo SINE Alu -105 208 86 1155 241 99 55 chr20 17410161 17410622 -54743260 - LTR33 LTR ERVL -6 515 76 1876 161 0 0 chr20 17410622 17410914 -54742968 + AluSx SINE Alu 1 292 -20 2491 51 3 16 chr20 17410914 17411225 -54742657 + AluY SINE Alu 1 307 -4 1155 241 99 55 chr20 17411225 17411255 -54742627 - LTR33 LTR ERVL -444 77 1 181 184 0 26 chr20 17411354 17411392 -54742490 - L3 LINE CR1 -10 1567 1531 1169 220 54 74 chr20 17411412 17411817 -54742065 - MLT2C1 LTR ERVL 0 397 1 187 262 48 48 chr20 17411817 17411901 -54741981 - L3 LINE CR1 -695 882 799 443 273 136 50 chr20 17411921 17412141 -54741741 - L3 LINE CR1 -747 830 592 201 264 19 0 chr20 17413345 17413398 -54740484 + L2 LINE L2 3252 3305 -8 345 219 14 82 chr20 17413937 17413990 -54739892 + MER113 DNA MER1_type? 10 65 -456 1112 263 61 67 chr20 17413990 17414369 -54739513 + LTR16A LTR ERVL 5 382 -68 2316 72 10 7 chr20 17414369 17414676 -54739206 - AluY SINE Alu -3 308 1 1112 263 61 67 chr20 17414676 17414741 -54739141 + LTR16A LTR ERVL 382 446 -4 345 219 14 82 chr20 17414741 17414833 -54739049 + MER113 DNA MER1_type? 65 145 -376 791 299 123 68 chr20 17414848 17415561 -54738321 + L1MEd LINE L1 12 684 -5435 2219 105 0 7 chr20 17415561 17415856 -54738026 - AluSx SINE Alu -19 293 1 791 299 123 68 chr20 17415856 17416006 -54737876 + L1MEd LINE L1 684 824 -5295 1694 184 3 7 chr20 17416006 17416299 -54737583 + AluJo SINE Alu 19 310 -2 791 299 123 68 chr20 17416299 17416435 -54737447 + L1MEd LINE L1 824 1067 -5052 1188 272 81 42 chr20 17416448 17416929 -54736953 + L1MEd LINE L1 2161 2689 -3440 1923 148 50 0 chr20 17416929 17417226 -54736656 - AluSx SINE Alu 0 312 1 1188 272 81 42 chr20 17417226 17417560 -54736322 + L1MEd LINE L1 2689 3008 -3121 384 216 31 10 chr20 17417560 17417657 -54736225 - HsTC2 DNA Tc2 0 1898 1800 231 279 0 0 chr20 17417765 17417833 -54736049 + LTR16A1 LTR ERVL 296 363 -94 23 0 0 0 chr20 17418538 17418561 -54735321 + AT_rich Low_complexity Low_complexity 1 23 0 579 288 108 9 chr20 17418678 17418900 -54734982 - MIR SINE MIR 0 262 19 1925 130 4 0 chr20 17419241 17419511 -54734371 + AluSx SINE Alu 1 271 -41 41 21 0 0 chr20 17419862 17419910 -54733972 + AT_rich Low_complexity Low_complexity 1 48 0 252 100 0 0 chr20 17420103 17420143 -54733739 + (TG)n Simple_repeat Simple_repeat 1 40 0 2197 116 7 3 chr20 17420464 17420766 -54733116 - AluSx SINE Alu -9 303 1 2261 92 0 30 chr20 17420773 17421076 -54732806 - AluSg1 SINE Alu -15 294 1 303 301 73 44 chr20 17422090 17422296 -54731586 - MIR SINE MIR -50 212 1 395 222 37 35 chr20 17422374 17422537 -54731345 + MIR SINE MIR 29 261 -1 2010 141 30 7 chr20 17422622 17422926 -54730956 + AluSx SINE Alu 1 311 -1 457 283 48 24 chr20 17423156 17423322 -54730560 - MIR SINE MIR -3 259 90 2218 114 0 0 chr20 17423900 17424189 -54729693 - AluSx SINE Alu -23 289 1 219 69 0 0 chr20 17424528 17424557 -54729325 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 1058 242 29 8 chr20 17425968 17426208 -54727674 - MIR SINE MIR 0 262 18 203 279 151 35 chr20 17427631 17427717 -54726165 + MIR SINE MIR 13 108 -154 2364 102 3 0 chr20 17428116 17428420 -54725462 + AluSx SINE Alu 1 305 -7 235 333 0 0 chr20 17428605 17428665 -54725217 + L2 LINE L2 3175 3234 -38 188 232 98 61 chr20 17428712 17428794 -54725088 + MIR SINE MIR 164 248 -14 251 150 50 0 chr20 17428808 17428868 -54725014 + L1MA8 LINE L1 5988 6050 -241 230 336 0 17 chr20 17428933 17429052 -54724830 - L1MC/D LINE L1 -1878 5930 5814 21 0 0 0 chr20 17429060 17429081 -54724801 + AT_rich Low_complexity Low_complexity 1 21 0 228 309 0 37 chr20 17429570 17429651 -54724231 - L2 LINE L2 -188 3084 3007 305 246 80 4 chr20 17430464 17430587 -54723295 + MIR SINE MIR 20 160 -48 228 35 0 0 chr20 17430710 17430739 -54723143 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1864 105 54 22 chr20 17430739 17431015 -54722867 - AluSx SINE Alu -27 285 1 242 132 19 0 chr20 17431573 17431626 -54722256 + GA-rich Low_complexity Low_complexity 1 54 0 2059 145 0 19 chr20 17432289 17432607 -54721275 + AluJb SINE Alu 1 312 0 1848 132 3 66 chr20 17432626 17432959 -54720923 + AluJb SINE Alu 1 312 0 578 27 27 0 chr20 17432963 17433038 -54720844 + (GAAA)n Simple_repeat Simple_repeat 2 78 0 1613 183 3 17 chr20 17433131 17433420 -54720462 - AluJb SINE Alu -17 295 11 2184 107 0 10 chr20 17433734 17434032 -54719850 + AluSx SINE Alu 1 295 -17 2229 127 0 3 chr20 17434537 17434851 -54719031 + AluSq SINE Alu 1 313 0 2288 86 10 16 chr20 17435099 17435403 -54718479 + AluY SINE Alu 1 302 -9 28 22 0 22 chr20 17436145 17436165 -54717717 + AT_rich Low_complexity Low_complexity 1 20 -25 2118 130 3 0 chr20 17436165 17436466 -54717416 - AluSx SINE Alu -10 302 1 28 22 0 22 chr20 17436466 17436491 -54717391 + AT_rich Low_complexity Low_complexity 20 45 0 371 289 206 44 chr20 17436693 17436873 -54717009 + L3 LINE CR1 426 634 -943 1804 116 8 15 chr20 17436886 17437145 -54716737 - AluSx SINE Alu -18 294 38 295 222 47 88 chr20 17437374 17437545 -54716337 + HAL1 LINE L1 2224 2387 -120 2167 100 3 13 chr20 17437576 17437877 -54716005 - AluSc SINE Alu -11 298 1 1293 208 81 75 chr20 17437999 17438480 -54715402 + L1MC5 LINE L1 6718 7201 -760 1692 178 0 7 chr20 17438481 17438750 -54715132 + MER66B LTR ERV1 2 268 -218 2336 85 0 19 chr20 17438750 17439066 -54714816 + AluSx SINE Alu 1 310 -2 339 281 176 36 chr20 17439209 17439343 -54714539 + L1M4 LINE L1 2907 3021 -3125 2625 55 0 0 chr20 17439343 17439654 -54714228 + AluY SINE Alu 1 311 0 339 281 176 36 chr20 17439654 17439740 -54714142 + L1M4 LINE L1 3021 3158 -2988 252 274 0 36 chr20 17440069 17440153 -54713729 - LTR58 LTR ERV1 -250 429 349 353 313 146 71 chr20 17440346 17440909 -54712973 + L1M4 LINE L1 3272 3876 -2270 829 180 14 95 chr20 17440962 17441173 -54712709 + MLT1A1 LTR MaLR 1 194 -171 318 241 46 11 chr20 17441174 17441261 -54712621 + L2 LINE L2 3179 3268 -4 413 284 184 27 chr20 17441275 17441606 -54712276 + L1M4 LINE L1 3877 4259 -1887 31 26 0 0 chr20 17441631 17441669 -54712213 + AT_rich Low_complexity Low_complexity 1 38 0 2274 107 3 0 chr20 17441671 17441979 -54711903 + AluSq SINE Alu 1 309 -4 181 330 209 27 chr20 17441981 17442239 -54711643 - L2 LINE L2 -556 2758 2454 540 275 101 31 chr20 17442267 17442525 -54711357 - HAL1 LINE L1 -1912 595 320 1471 141 8 31 chr20 17442542 17442751 -54711131 - L1M3 LINE L1 -491 5504 5301 180 0 0 0 chr20 17442751 17442771 -54711111 + (TG)n Simple_repeat Simple_repeat 2 21 0 1471 141 8 31 chr20 17442771 17442816 -54711066 - L1M3 LINE L1 -694 5301 5256 1224 109 0 6 chr20 17442818 17442993 -54710889 - AluSq SINE Alu -2 311 138 11950 197 36 45 chr20 17442995 17444215 -54709667 - L1M3 LINE L1 -726 5266 4036 2222 107 3 0 chr20 17444215 17444523 -54709359 - AluY SINE Alu -2 309 1 1906 162 0 7 chr20 17444525 17444822 -54709060 - AluSx SINE Alu -17 295 1 11950 197 36 45 chr20 17444822 17445245 -54708637 - L1M3 LINE L1 -1957 4035 3610 1848 167 3 16 chr20 17445245 17445551 -54708331 - AluJb SINE Alu -10 302 1 11950 197 36 45 chr20 17445551 17446127 -54707755 - L1M3 LINE L1 -2382 3610 3030 2056 149 0 0 chr20 17446127 17446435 -54707447 - AluSx SINE Alu -4 308 1 11950 197 36 45 chr20 17446435 17447382 -54706500 - L1M3 LINE L1 -2962 3030 2123 316 173 67 96 chr20 17447382 17447486 -54706396 - MER101 LTR ERV1 0 474 374 524 213 90 16 chr20 17447741 17447863 -54706019 - MER101B LTR ERV1 -439 131 1 3712 247 46 34 chr20 17447863 17448250 -54705632 - L1M3 LINE L1 -3844 2126 1745 1913 151 3 3 chr20 17448250 17448534 -54705348 - AluSx SINE Alu -17 295 12 3712 247 46 34 chr20 17448534 17449021 -54704861 - L1M3 LINE L1 -4225 1745 1266 2351 105 7 0 chr20 17449021 17449326 -54704556 - AluSc SINE Alu -2 307 1 3712 247 46 34 chr20 17449326 17450098 -54703784 - L1M3 LINE L1 -4704 1266 522 192 77 0 0 chr20 17450098 17450124 -54703758 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3712 247 46 34 chr20 17450124 17450245 -54703637 - L1M3 LINE L1 -5448 522 404 511 289 69 67 chr20 17450399 17450790 -54703092 - L1M3 LINE L1 -5489 402 11 2553 66 0 0 chr20 17450899 17451203 -54702679 - AluY SINE Alu -7 304 1 2069 101 3 83 chr20 17451427 17451765 -54702117 + AluSq SINE Alu 1 311 -2 2280 91 0 25 chr20 17451767 17452086 -54701796 + AluY SINE Alu 1 311 0 275 335 70 19 chr20 17452391 17452549 -54701333 + MIR SINE MIR 85 250 -12 2161 128 0 0 chr20 17453811 17454107 -54699775 - AluSx SINE Alu -16 296 1 2468 67 0 7 chr20 17454662 17454959 -54698923 - AluY SINE Alu -16 295 1 27 0 0 0 chr20 17455796 17455823 -54698059 + AT_rich Low_complexity Low_complexity 1 27 0 2144 121 0 3 chr20 17455906 17456212 -54697670 + AluSg SINE Alu 1 305 -5 340 277 26 58 chr20 17457150 17457305 -54696577 - MIR SINE MIR -110 152 3 206 328 16 0 chr20 17457339 17457403 -54696479 + MIR3 SINE MIR 121 185 -23 2801 16 0 13 chr20 17457593 17457906 -54695976 + AluYa5 SINE Alu 1 309 -2 1657 190 93 75 chr20 17457916 17458414 -54695468 - MLT1H LTR MaLR -2 547 1 1017 105 24 4 chr20 17458577 17458589 -54695293 - L1MA6 LINE L1 -1 6299 6289 386 141 26 0 chr20 17458589 17458667 -54695215 - L1MA5 LINE L1 0 6300 6221 1017 105 24 4 chr20 17458667 17458846 -54695036 - L1MA6 LINE L1 -11 6289 6092 2325 97 0 0 chr20 17459401 17459690 -54694192 + AluSc SINE Alu 1 289 -20 370 235 183 13 chr20 17459879 17460032 -54693850 - MER104 DNA Tc2 0 180 2 423 38 0 0 chr20 17460059 17460112 -54693770 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 246 268 56 0 chr20 17460520 17460591 -54693291 - MIR3 SINE MIR -3 205 131 229 352 11 0 chr20 17460606 17460694 -54693188 - L2 LINE L2 0 3272 3184 21 0 0 0 chr20 17461026 17461047 -54692835 + AT_rich Low_complexity Low_complexity 1 21 0 2038 133 0 3 chr20 17461065 17461350 -54692532 + AluSx SINE Alu 6 289 -23 25 0 0 0 chr20 17461350 17461375 -54692507 + AT_rich Low_complexity Low_complexity 1 25 0 1241 79 6 24 chr20 17462240 17462405 -54691477 + AluSg/x SINE Alu 135 296 -16 515 214 62 9 chr20 17463249 17463361 -54690521 + FLAM_A SINE Alu 2 119 -14 31 0 0 0 chr20 17463361 17463392 -54690490 + AT_rich Low_complexity Low_complexity 1 31 0 2371 94 0 3 chr20 17463588 17463895 -54689987 + AluSx SINE Alu 1 306 -6 183 205 0 0 chr20 17464286 17464325 -54689557 + A-rich Low_complexity Low_complexity 1 39 0 419 205 7 106 chr20 17464405 17464556 -54689326 - L1MB5 LINE L1 -2 6172 6037 639 222 20 0 chr20 17465156 17465309 -54688573 + MIR SINE MIR 9 164 -98 1286 154 0 0 chr20 17465309 17465491 -54688391 + AluJb SINE Alu 2 183 -129 234 175 0 0 chr20 17465506 17465546 -54688336 + MIR SINE MIR 201 240 -22 544 233 11 130 chr20 17467035 17467053 -54686829 + MER102b DNA MER1_type 103 122 -1306 2281 99 0 0 chr20 17467053 17467372 -54686510 + AluSc SINE Alu 1 319 0 544 233 11 130 chr20 17467372 17467422 -54686460 + MER102b DNA MER1_type 122 176 -1252 2108 136 3 3 chr20 17467422 17467731 -54686151 + AluSx SINE Alu 1 309 -3 544 233 11 130 chr20 17467731 17467930 -54685952 + MER102b DNA MER1_type 176 340 -1 220 302 0 0 chr20 17468055 17468108 -54685774 + CT-rich Low_complexity Low_complexity 2 54 0 2728 80 0 11 chr20 17468108 17468460 -54685422 - THE1C LTR MaLR 0 375 28 2219 124 0 0 chr20 17468901 17469200 -54684682 + AluSx SINE Alu 1 299 -13 249 252 8 106 chr20 17469619 17469742 -54684140 + L2 LINE L2 2976 3086 -186 2391 107 0 0 chr20 17469764 17470072 -54683810 - AluSx SINE Alu -4 308 1 22 35 0 0 chr20 17470962 17470991 -54682891 + AT_rich Low_complexity Low_complexity 1 29 0 2257 93 26 7 chr20 17471815 17472117 -54681765 + AluSg SINE Alu 1 308 -2 455 276 94 6 chr20 17473022 17473192 -54680690 - MIR SINE MIR -66 196 12 258 253 200 20 chr20 17473216 17473366 -54680516 - MIR3 SINE MIR -17 191 15 309 26 0 0 chr20 17474854 17474892 -54678990 + (CA)n Simple_repeat Simple_repeat 2 39 0 2279 98 0 22 chr20 17476711 17477027 -54676855 - AluSc SINE Alu 0 309 1 1934 146 0 31 chr20 17477716 17478044 -54675838 + AluJb SINE Alu 1 319 0 417 326 93 27 chr20 17478580 17478881 -54675001 - L2 LINE L2 -36 3277 2957 389 304 27 9 chr20 17478947 17479059 -54674823 - L2 LINE L2 -513 2801 2688 835 179 19 0 chr20 17479062 17479218 -54674664 + L1MB8 LINE L1 6015 6173 -5 231 64 43 21 chr20 17479219 17479266 -54674616 + (TA)n Simple_repeat Simple_repeat 2 49 0 1328 181 127 7 chr20 17479272 17479548 -54674334 + AluSg SINE Alu 1 309 -1 1314 255 126 82 chr20 17479548 17480636 -54673246 - L2 LINE L2 -618 2696 1561 2075 77 31 42 chr20 17480709 17481018 -54672864 + AluSq SINE Alu 1 306 0 422 323 3 28 chr20 17482133 17482328 -54671554 - MIR SINE MIR -35 227 37 1853 145 47 14 chr20 17484283 17484580 -54669302 + AluSx SINE Alu 1 307 -5 632 271 133 45 chr20 17484853 17485207 -54668675 + MLT1J2 LTR MaLR 64 448 -2 188 277 0 0 chr20 17485578 17485625 -54668257 + L2 LINE L2 3002 3048 -224 2392 92 3 0 chr20 17485638 17485941 -54667941 - AluSc SINE Alu -5 304 1 389 261 112 56 chr20 17486007 17486168 -54667714 - L2 LINE L2 0 3272 3103 646 272 107 49 chr20 17486917 17487160 -54666722 + MIR SINE MIR 5 261 -1 364 274 84 53 chr20 17487160 17487199 -54666683 + L1ME4a LINE L1 5790 5826 -295 1769 152 0 52 chr20 17487199 17487509 -54666373 + AluJb SINE Alu 1 294 -18 364 274 84 53 chr20 17487509 17487790 -54666092 + L1ME4a LINE L1 5826 6120 -1 402 291 134 0 chr20 17489236 17489408 -54664474 - L2 LINE L2 -1 3312 3118 1946 142 35 7 chr20 17489471 17489760 -54664122 - AluSx SINE Alu -15 297 1 1869 210 126 23 chr20 17489834 17490320 -54663562 - MLT1E2 LTR MaLR 0 626 91 1165 81 8 43 chr20 17492093 17492463 -54661419 + (TTC)n Simple_repeat Simple_repeat 1 356 0 2153 106 45 0 chr20 17492500 17492792 -54661090 - AluSx SINE Alu -7 305 1 437 270 47 0 chr20 17492794 17492942 -54660940 + MIR SINE MIR 101 255 -7 491 299 86 0 chr20 17493169 17493343 -54660539 + MIR SINE MIR 24 212 -50 1701 164 53 13 chr20 17494170 17494332 -54659550 - AluSx SINE Alu -1 311 157 2215 97 13 19 chr20 17494332 17494640 -54659242 - AluSc SINE Alu -3 306 1 1701 164 53 13 chr20 17494640 17494776 -54659106 - AluSx SINE Alu -155 157 1 2398 91 0 0 chr20 17494815 17495113 -54658769 + AluSc SINE Alu 7 304 -5 502 273 143 5 chr20 17495394 17495610 -54658272 - MIR SINE MIR -10 252 7 806 240 175 17 chr20 17495612 17496056 -54657826 - MLT1H1 LTR MaLR -1 554 1 303 28 0 0 chr20 17496315 17496351 -54657531 + (CA)n Simple_repeat Simple_repeat 2 37 0 798 189 0 0 chr20 17496873 17497005 -54656877 - FLAM_A SINE Alu -1 132 1 2322 99 3 7 chr20 17497412 17497716 -54656166 + AluSq SINE Alu 1 303 -10 890 220 192 81 chr20 17498023 17498528 -54655354 + MER34B LTR ERV1 5 565 0 1321 247 129 29 chr20 17498642 17498779 -54655103 - LTR16C LTR ERVL 0 491 369 1959 145 0 20 chr20 17498779 17499076 -54654806 + AluJo SINE Alu 1 291 -21 1321 247 129 29 chr20 17499076 17499380 -54654502 - LTR16C LTR ERVL -122 369 6 194 254 0 18 chr20 17499420 17499475 -54654407 - L2 LINE L2 -5 3267 3214 191 267 168 20 chr20 17499541 17499642 -54654240 - MIR SINE MIR -15 247 132 658 283 89 57 chr20 17500126 17500441 -54653441 - LTR16C LTR ERVL 0 491 167 1097 164 117 164 chr20 17500664 17501194 -54652688 + MLT1D LTR MaLR 1 505 0 2138 122 7 0 chr20 17502275 17502570 -54651312 - AluSx SINE Alu -15 297 1 382 276 109 13 chr20 17502869 17503025 -54650857 - MIR SINE MIR -86 176 6 2304 93 3 3 chr20 17503156 17503456 -54650426 - AluSg SINE Alu -10 300 1 1042 269 119 11 chr20 17503834 17504187 -54649695 + LTR16C LTR ERVL 99 489 -2 219 313 104 22 chr20 17504264 17504398 -54649484 + L2 LINE L2 3169 3313 0 2967 205 66 56 chr20 17504548 17505333 -54648549 - MER21B LTR ERV1 -52 811 19 426 206 0 72 chr20 17505353 17505450 -54648432 - MER21B LTR ERV1 -773 90 1 2266 100 0 3 chr20 17505586 17505875 -54648007 + AluSq SINE Alu 1 288 -25 1397 181 96 22 chr20 17506141 17506412 -54647470 + AluJo SINE Alu 5 295 -17 521 272 76 17 chr20 17507183 17507473 -54646409 + L1ME4a LINE L1 5627 5933 -188 1797 218 57 11 chr20 17507587 17508065 -54645817 + L1M4 LINE L1 2184 2683 -3463 3225 168 35 10 chr20 17508070 17508671 -54645211 + L1MB7 LINE L1 5569 6184 0 508 267 76 82 chr20 17508894 17509235 -54644647 + MLT1I LTR MaLR 71 409 0 321 216 235 39 chr20 17509595 17509748 -54644134 - MIR SINE MIR -9 253 71 401 218 8 81 chr20 17509927 17510051 -54643831 - L2 LINE L2 -1 3312 3198 328 267 0 0 chr20 17510094 17510169 -54643713 + L1ME4a LINE L1 5579 5653 -468 557 246 221 9 chr20 17510182 17510512 -54643370 + L1ME4a LINE L1 5711 6110 -11 995 164 12 18 chr20 17510565 17510736 -54643146 - FRAM SINE Alu -9 167 1 206 301 168 31 chr20 17510852 17511048 -54642834 + L2 LINE L2 2458 2698 -616 2041 148 3 0 chr20 17511048 17511352 -54642530 - AluSx SINE Alu -7 305 1 206 301 168 31 chr20 17511352 17511411 -54642471 + L2 LINE L2 2698 2748 -566 862 180 0 36 chr20 17511411 17511578 -54642304 + FRAM SINE Alu 1 157 -19 287 297 90 9 chr20 17511631 17511742 -54642140 - LTR16C LTR ERVL 0 491 372 268 326 12 23 chr20 17511841 17511927 -54641955 - MER5A DNA MER1_type -1 188 104 2149 143 0 0 chr20 17512072 17512379 -54641503 - AluSc SINE Alu 0 309 3 2064 111 3 36 chr20 17512383 17512690 -54641192 - AluSx SINE Alu -15 297 1 363 60 0 0 chr20 17512737 17512787 -54641095 + (CA)n Simple_repeat Simple_repeat 2 51 0 286 115 16 98 chr20 17513063 17513124 -54640758 + MIR SINE MIR 183 238 -24 193 219 0 24 chr20 17513091 17513132 -54640750 + L2 LINE L2 3210 3249 -23 * 451 202 11 0 chr20 17513147 17513236 -54640646 + HsTC2 DNA Tc2 4 93 -1805 183 241 145 36 chr20 17513519 17513602 -54640280 + L2 LINE L2 3207 3298 -15 233 290 269 0 chr20 17513652 17513745 -54640137 + L2 LINE L2 3150 3267 -5 332 155 239 0 chr20 17513987 17514058 -54639824 + MER5B DNA MER1_type 43 130 -48 280 252 170 27 chr20 17514313 17514460 -54639422 + MIR3 SINE MIR 33 200 -8 367 180 90 22 chr20 17515019 17515108 -54638774 - MIR SINE MIR 0 262 168 1152 98 0 13 chr20 17515132 17515285 -54638597 - AluSg/x SINE Alu -17 293 143 347 137 0 0 chr20 17515286 17515337 -54638545 - Alu SINE Alu -251 51 1 341 167 152 0 chr20 17515338 17515404 -54638478 - MIR SINE MIR -112 150 75 250 275 73 28 chr20 17515918 17516027 -54637855 - MIR SINE MIR -147 115 2 467 193 114 54 chr20 17516847 17517013 -54636869 + MIR SINE MIR 65 240 -22 2120 118 7 0 chr20 17517399 17517696 -54636186 + AluSx SINE Alu 1 299 -13 290 186 0 17 chr20 17517706 17517765 -54636117 + AluSp SINE Alu 136 193 -110 404 211 114 60 chr20 17518133 17518299 -54635583 - MIR3 SINE MIR -16 192 18 2588 171 141 2 chr20 17519083 17519580 -54634302 - MLT1F1 LTR MaLR -1 566 1 1909 149 17 3 chr20 17520005 17520301 -54633581 - AluJb SINE Alu -12 300 1 2194 92 3 14 chr20 17521046 17521371 -54632511 + AluSc SINE Alu 1 309 0 796 154 132 0 chr20 17522063 17522199 -54631683 - FRAM SINE Alu -12 154 1 198 292 283 0 chr20 17525334 17525447 -54628435 + MIR3 SINE MIR 50 194 -14 243 280 88 48 chr20 17525828 17525953 -54627929 + MIR SINE MIR 16 145 -63 422 271 49 41 chr20 17526508 17526630 -54627252 + MIR SINE MIR 9 131 -131 253 229 208 42 chr20 17527144 17527240 -54626642 + L2 LINE L2 3182 3293 -20 2245 110 0 0 chr20 17527473 17527765 -54626117 + AluSx SINE Alu 11 302 -10 462 223 133 48 chr20 17527765 17527931 -54625951 + L1ME3 LINE L1 5983 6162 0 375 227 45 0 chr20 17527992 17528080 -54625802 + MIR SINE MIR 83 174 -88 2355 323 143 35 chr20 17528950 17531379 -54622503 + L2 LINE L2 365 3067 -205 182 317 98 12 chr20 17531388 17531470 -54622412 + L2 LINE L2 1103 1191 -2123 328 267 86 35 chr20 17531614 17531730 -54622152 + L2 LINE L2 3136 3257 -15 307 306 195 32 chr20 17531913 17532293 -54621589 - L3 LINE CR1 -9 1568 1066 1958 133 0 23 chr20 17532750 17533051 -54620831 - AluSg SINE Alu -16 294 1 356 303 51 6 chr20 17533058 17533236 -54620646 + L1MC4a LINE L1 5725 5910 -1898 2276 104 0 0 chr20 17533367 17533665 -54620217 + AluY SINE Alu 1 298 -13 843 168 0 0 chr20 17533667 17533804 -54620078 + AluSg/x SINE Alu 135 271 -39 225 373 106 47 chr20 17534021 17534178 -54619704 - L3 LINE CR1 -985 592 415 2148 104 0 29 chr20 17534178 17534487 -54619395 - AluY SINE Alu -11 300 1 225 373 106 47 chr20 17534487 17534565 -54619317 - L3 LINE CR1 -1162 415 343 1527 161 61 18 chr20 17534777 17535056 -54618826 - AluJb SINE Alu -21 291 1 22 0 0 0 chr20 17535202 17535224 -54618658 + AT_rich Low_complexity Low_complexity 1 22 0 475 227 31 0 chr20 17535903 17536000 -54617882 + L2 LINE L2 3213 3312 -1 458 243 62 43 chr20 17536000 17536334 -54617548 + L1ME4a LINE L1 5670 6017 -104 1919 196 63 36 chr20 17536335 17536627 -54617255 + Charlie1b DNA MER1_type 1 314 -2447 2087 127 0 19 chr20 17536627 17536934 -54616948 + AluSx SINE Alu 1 301 -11 1919 196 63 36 chr20 17536934 17537145 -54616737 + Charlie1b DNA MER1_type 314 518 -5 2322 102 0 7 chr20 17538022 17538326 -54615556 - AluSq SINE Alu -11 302 1 32 26 0 0 chr20 17539258 17539297 -54614585 + AT_rich Low_complexity Low_complexity 1 39 0 1817 225 105 21 chr20 17539555 17540040 -54613842 + MLT1H LTR MaLR 15 540 -9 2357 105 0 0 chr20 17540992 17541296 -54612586 - AluSx SINE Alu -8 304 1 206 314 166 31 chr20 17541438 17541667 -54612215 + L2 LINE L2 2716 2975 -339 5482 122 54 18 chr20 17542789 17543666 -54610216 - L1MC1 LINE L1 0 6333 5426 2128 123 7 0 chr20 17543722 17544014 -54609868 - AluSx SINE Alu -16 296 3 361 194 28 0 chr20 17544502 17544574 -54609308 + MER81 DNA DNA 41 114 0 1914 161 0 0 chr20 17544890 17545176 -54608706 - AluJb SINE Alu -26 286 1 1099 121 0 13 chr20 17545545 17545702 -54608180 - AluSx SINE Alu -157 155 1 2312 93 10 0 chr20 17546134 17546436 -54607446 + AluSx SINE Alu 1 305 -7 390 244 165 25 chr20 17546522 17546764 -54607118 + L1ME LINE L1 5093 5368 -778 468 289 64 45 chr20 17546876 17547142 -54606740 + L1ME LINE L1 5554 5824 -297 266 231 29 96 chr20 17547263 17547367 -54606515 + L1ME4a LINE L1 1210 6069 -42 421 182 159 0 chr20 17548441 17548529 -54605353 + MER63A DNA MER1_type 109 210 0 796 222 7 0 chr20 17548687 17548831 -54605051 + MER63A DNA MER1_type 57 201 -9 505 214 151 38 chr20 17549317 17549476 -54604406 - MIR SINE MIR -70 192 16 1342 269 137 27 chr20 17549734 17550399 -54603483 - L2 LINE L2 -129 3184 2416 223 330 86 34 chr20 17550407 17550616 -54603266 + L2 LINE L2 2489 2708 -606 2441 77 0 3 chr20 17550937 17551237 -54602645 + AluY SINE Alu 1 299 -12 2181 118 0 0 chr20 17551248 17551545 -54602337 + AluSx SINE Alu 1 297 -15 191 286 104 13 chr20 17552589 17552666 -54601216 - L2 LINE L2 -15 3257 3174 * 267 367 18 0 chr20 17552638 17552747 -54601135 - MIR SINE MIR -151 111 1 183 80 0 0 chr20 17553622 17553647 -54600235 + (CA)n Simple_repeat Simple_repeat 2 26 0 415 192 222 48 chr20 17554682 17554749 -54599133 + L2 LINE L2 2692 2746 -568 1489 122 52 67 chr20 17554749 17555078 -54598804 - MER33 DNA MER1_type 0 324 1 415 192 222 48 chr20 17555078 17555177 -54598705 + L2 LINE L2 2746 2887 -427 32 0 0 0 chr20 17555386 17555418 -54598464 + GC_rich Low_complexity Low_complexity 1 32 0 206 297 0 16 chr20 17556264 17556328 -54597554 + MIR SINE MIR 153 215 -47 1622 140 63 7 chr20 17556877 17557163 -54596719 - AluJb SINE Alu -10 302 1 2254 109 0 3 chr20 17558535 17558837 -54595045 + AluSx SINE Alu 1 301 -11 422 290 70 0 chr20 17558972 17559072 -54594810 - MER91A DNA MER1_type 0 196 90 * 488 327 74 0 chr20 17559071 17559233 -54594649 - MER91A DNA MER1_type -20 176 3 1002 149 129 37 chr20 17559261 17559533 -54594349 - MER33 DNA MER1_type -34 290 1 232 220 237 0 chr20 17560498 17560557 -54593325 - MIR SINE MIR -100 108 36 257 217 145 0 chr20 17560769 17560838 -54593044 + L1ME LINE L1 5603 5681 -440 2178 133 0 0 chr20 17560878 17561178 -54592704 + AluSx SINE Alu 1 300 -12 1874 153 10 7 chr20 17561648 17561948 -54591934 - AluJb SINE Alu -11 301 1 252 222 19 0 chr20 17562057 17562111 -54591771 - MER113 DNA MER1_type? -8 513 459 22 35 0 0 chr20 17562221 17562250 -54591632 + AT_rich Low_complexity Low_complexity 1 29 0 248 298 0 0 chr20 17562742 17562799 -54591083 + L2 LINE L2 3214 3270 -2 670 333 91 37 chr20 17563143 17563659 -54590223 + L2 LINE L2 2181 2724 -590 268 398 46 54 chr20 17563831 17564180 -54589702 + L2 LINE L2 2913 3258 -14 216 219 0 0 chr20 17564605 17564687 -54589195 + (ATG)n Simple_repeat Simple_repeat 2 83 0 226 264 11 23 chr20 17565698 17565785 -54588097 + L1M4 LINE L1 4163 4248 -1898 421 291 89 57 chr20 17566016 17566255 -54587627 + MIR SINE MIR 8 257 -5 952 122 176 29 chr20 17566255 17566460 -54587422 - MER46A DNA MER2_type -1 235 1 2632 31 0 0 chr20 17566605 17566899 -54586983 - AluY SINE Alu -17 294 1 323 172 0 16 chr20 17566952 17567016 -54586866 + U2 snRNA snRNA 2 64 -124 186 43 0 0 chr20 17568780 17568803 -54585079 + (A)n Simple_repeat Simple_repeat 1 23 0 268 240 0 0 chr20 17569744 17569794 -54584088 + MER3 DNA MER1_type 41 90 -119 264 216 0 0 chr20 17569755 17569806 -54584076 - MER3 DNA MER1_type -4 205 155 * 404 169 0 0 chr20 17569844 17569909 -54583973 - MER3 DNA MER1_type -144 65 1 1473 162 101 25 chr20 17570065 17570343 -54583539 + AluJo SINE Alu 1 299 -13 21 0 0 0 chr20 17570657 17570678 -54583204 + AT_rich Low_complexity Low_complexity 1 21 0 1972 141 10 10 chr20 17570904 17571208 -54582674 - AluSx SINE Alu -8 304 1 2312 99 0 3 chr20 17571784 17572097 -54581785 - AluSx SINE Alu 0 312 1 1873 121 4 0 chr20 17572106 17572371 -54581511 - AluSx SINE Alu -6 306 41 1917 100 43 50 chr20 17573166 17573467 -54580415 - AluSq SINE Alu -14 299 1 21 0 0 0 chr20 17574063 17574084 -54579798 + AT_rich Low_complexity Low_complexity 1 21 0 693 279 77 16 chr20 17574329 17574759 -54579123 - L1MEd LINE L1 -4868 1251 896 2052 136 0 0 chr20 17575477 17575771 -54578111 - AluSx SINE Alu -18 294 1 2106 181 35 24 chr20 17575833 17576258 -54577624 + Tigger2a DNA MER2_type 5 434 0 254 266 242 8 chr20 17577362 17577490 -54576392 + MIR SINE MIR 17 174 -88 2544 59 0 3 chr20 17577551 17577857 -54576025 + AluY SINE Alu 1 305 -6 24 32 0 0 chr20 17578597 17578628 -54575254 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr20 17579283 17579315 -54574567 + AT_rich Low_complexity Low_complexity 1 32 0 7314 73 8 18 chr20 17579315 17580538 -54573344 - SVA Other Other -683 1385 432 1530 140 137 33 chr20 17581564 17581871 -54572011 + MER44D DNA MER2_type 1 609 0 711 329 37 40 chr20 17582371 17582693 -54571189 + L3 LINE CR1 1171 1491 -86 1790 147 0 21 chr20 17583010 17583315 -54570567 + AluJb SINE Alu 3 301 0 534 267 68 6 chr20 17583396 17583572 -54570310 - L1M4 LINE L1 -2329 3817 3631 673 286 33 9 chr20 17584102 17584365 -54569517 - L1MC/D LINE L1 -441 5680 5423 247 269 0 15 chr20 17584496 17584563 -54569319 + MIR SINE MIR 106 171 -91 25 102 0 0 chr20 17585012 17585100 -54568782 + AT_rich Low_complexity Low_complexity 1 88 0 482 276 83 0 chr20 17585527 17585672 -54568210 - L2 LINE L2 -1 3312 3156 1660 272 331 11 chr20 17585729 17586633 -54567249 - L2 LINE L2 -340 2974 1782 1383 279 153 65 chr20 17586755 17586789 -54567093 - L2 LINE L2 -2387 927 897 783 44 195 0 chr20 17586789 17586902 -54566980 - MER85 DNA T2_type -4 135 1 1383 279 153 65 chr20 17586902 17587718 -54566164 - L2 LINE L2 -2417 897 2 271 293 49 12 chr20 17588353 17588435 -54565447 - MIR SINE MIR -132 130 46 1995 101 40 3 chr20 17588694 17588990 -54564892 - AluSc SINE Alu -2 307 1 1410 201 44 17 chr20 17589722 17590015 -54563867 - AluJo SINE Alu -11 301 1 2214 117 0 0 chr20 17590180 17590489 -54563393 - AluSx SINE Alu -3 309 1 2254 98 0 10 chr20 17590845 17591150 -54562732 + AluSx SINE Alu 1 302 -10 1550 114 107 75 chr20 17591357 17591637 -54562245 + AluSg SINE Alu 1 289 -21 2182 75 10 10 chr20 17591825 17592119 -54561763 + AluY SINE Alu 1 294 -17 1011 161 0 0 chr20 17592119 17592299 -54561583 + (TA)n Simple_repeat Simple_repeat 1 180 0 352 310 203 6 chr20 17592338 17592496 -54561386 - MIR SINE MIR -12 250 62 1556 124 19 112 chr20 17592577 17592899 -54560983 + MER7A DNA MER2_type 1 290 -56 627 184 50 35 chr20 17592899 17593040 -54560842 + Tigger3(Golem) DNA MER2_type 2895 3037 0 1992 97 0 103 chr20 17593094 17593433 -54560449 - AluSc SINE Alu -5 304 1 1987 153 0 7 chr20 17594447 17594748 -54559134 + AluSx SINE Alu 1 299 -13 521 282 121 46 chr20 17594880 17594960 -54558922 - L1ME3 LINE L1 -212 5950 5877 2108 139 0 0 chr20 17594960 17595261 -54558621 + AluSx SINE Alu 1 301 -11 521 282 121 46 chr20 17595261 17595683 -54558199 - L1ME3 LINE L1 -285 5877 5410 1248 240 74 45 chr20 17595683 17596279 -54557603 - L2 LINE L2 -23 3290 2685 423 259 63 0 chr20 17596342 17596485 -54557397 - L1ME3 LINE L1 -833 5313 5162 4089 139 57 6 chr20 17596802 17597616 -54556266 - L1MA9 LINE L1 -22 6290 5339 1186 142 182 0 chr20 17597659 17597906 -54555976 + L1MB8 LINE L1 5812 6103 -75 480 290 174 15 chr20 17597965 17598224 -54555658 - L1ME3A LINE L1 -273 5880 5581 1707 112 124 11 chr20 17598224 17598491 -54555391 - AluSg SINE Alu -13 297 1 971 135 0 0 chr20 17598494 17598627 -54555255 - AluSq/x SINE Alu -179 133 1 483 288 120 24 chr20 17598684 17599283 -54554599 - L1ME3A LINE L1 -770 5359 4750 994 268 81 65 chr20 17599317 17599750 -54554132 - L2 LINE L2 -2848 466 27 671 252 75 32 chr20 17600032 17600310 -54553572 - L1ME3A LINE L1 -4863 1256 967 522 285 107 33 chr20 17600435 17600677 -54553205 - L1ME3A LINE L1 -5403 716 457 414 270 25 88 chr20 17601865 17602069 -54551813 - L2 LINE L2 -5 3308 3118 2012 141 3 7 chr20 17602097 17602394 -54551488 + AluJb SINE Alu 1 296 -16 2233 96 3 10 chr20 17602756 17603049 -54550833 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr20 17603350 17603372 -54550510 + AT_rich Low_complexity Low_complexity 1 22 0 225 318 0 32 chr20 17604129 17604192 -54549690 - L2 LINE L2 -10 3303 3243 1086 203 63 5 chr20 17604367 17604574 -54549308 + MER20 DNA MER1_type 1 219 0 248 229 0 0 chr20 17605622 17605670 -54548212 - MIR3 SINE MIR -49 159 112 200 98 73 0 chr20 17606619 17606660 -54547222 + (GTTTG)n Simple_repeat Simple_repeat 3 46 0 332 332 96 11 chr20 17607002 17607189 -54546693 - MIR SINE MIR 0 262 60 2062 125 4 0 chr20 17607486 17607808 -54546074 + AluSx SINE Alu 1 323 0 331 289 139 50 chr20 17608006 17608186 -54545696 - MIR3 SINE MIR -9 199 4 3106 128 74 25 chr20 17608348 17608878 -54545004 - MER21A LTR ERV1 0 931 376 490 190 116 3 chr20 17608883 17609067 -54544815 - MER21A LTR ERV1 -667 264 2 2263 48 0 4 chr20 17609157 17609428 -54544454 - AluY SINE Alu -7 304 35 2402 77 0 3 chr20 17610028 17610326 -54543556 + AluY SINE Alu 1 297 -14 2244 98 0 7 chr20 17610338 17610633 -54543249 + AluSq SINE Alu 1 293 -20 244 214 205 27 chr20 17610945 17611057 -54542825 + L1MC5 LINE L1 7795 7926 -35 253 268 85 98 chr20 17611167 17611432 -54542450 + L2 LINE L2 3023 3285 -28 2163 119 7 0 chr20 17611432 17611735 -54542147 - AluSx SINE Alu -7 305 1 253 268 85 98 chr20 17611735 17611764 -54542118 + L2 LINE L2 3285 3313 0 2253 109 0 13 chr20 17611815 17612127 -54541755 - AluSg SINE Alu -2 308 1 324 0 0 0 chr20 17613843 17613879 -54540003 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 1384 315 167 14 chr20 17613952 17615428 -54538454 - L2 LINE L2 -1 3312 1606 2322 105 0 3 chr20 17616387 17616700 -54537182 - AluSx SINE Alu 0 312 1 1661 154 39 51 chr20 17617833 17618144 -54535738 - AluJo SINE Alu -5 307 1 377 382 100 13 chr20 17619142 17619443 -54534439 + L2 LINE L2 2945 3271 -1 2255 108 0 7 chr20 17619568 17619873 -54534009 - AluSx SINE Alu -9 303 1 279 269 47 0 chr20 17620191 17620329 -54533553 - L1MC5 LINE L1 -395 7413 7272 328 333 16 40 chr20 17620940 17621189 -54532693 - L1M4 LINE L1 -1023 5123 4881 315 161 42 169 chr20 17621371 17621489 -54532393 - L1M4 LINE L1 -2192 3954 3852 309 289 74 59 chr20 17621465 17621721 -54532161 - L1M4 LINE L1 -1543 4603 4344 * 2118 122 0 28 chr20 17623452 17623595 -54530287 + AluJb SINE Alu 1 146 -166 2565 74 0 0 chr20 17623595 17623906 -54529976 + AluY SINE Alu 1 311 0 2118 122 0 28 chr20 17623906 17624083 -54529799 + AluJb SINE Alu 146 312 0 32 26 0 0 chr20 17625495 17625534 -54528348 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr20 17626070 17626092 -54527790 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 17626201 17626238 -54527644 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr20 17626258 17626288 -54527594 + AT_rich Low_complexity Low_complexity 1 30 0 1442 174 9 114 chr20 17626894 17627007 -54526875 + AluJo SINE Alu 1 124 -188 1876 140 11 11 chr20 17627007 17627293 -54526589 + AluSx SINE Alu 1 286 -26 1442 174 9 114 chr20 17627293 17627513 -54526369 + AluJo SINE Alu 124 299 -13 669 244 23 35 chr20 17628522 17628628 -54525254 + MER5B DNA MER1_type 8 113 -65 2096 99 13 30 chr20 17628628 17628930 -54524952 - AluSx SINE Alu -15 297 1 669 244 23 35 chr20 17628930 17628995 -54524887 + MER5B DNA MER1_type 113 177 -1 356 240 53 45 chr20 17629086 17629240 -54524642 - MLT1H LTR MaLR -2 583 430 265 232 142 65 chr20 17629257 17629412 -54524470 - MLT1H LTR MaLR -257 292 126 1842 197 87 47 chr20 17629567 17630432 -54523450 - L1ME LINE L1 -429 5737 4845 1235 215 45 77 chr20 17630431 17630990 -54522892 + L1MD2 LINE L1 3419 3959 -2187 * 824 104 0 0 chr20 17630993 17631099 -54522783 + AluSq/x SINE Alu 1 106 -207 1520 119 5 0 chr20 17631105 17631327 -54522555 + AluSg/x SINE Alu 79 301 0 1325 226 33 33 chr20 17631331 17631616 -54522266 + L1MD2 LINE L1 3959 4246 -1900 2267 92 27 3 chr20 17631616 17631909 -54521973 + AluSq SINE Alu 2 301 -12 1325 226 33 33 chr20 17631909 17632012 -54521870 + L1MD2 LINE L1 4245 4347 -1799 3642 197 21 15 chr20 17632012 17632818 -54521064 + L1MD2 LINE L1 5547 6357 -2 701 216 0 0 chr20 17632822 17632938 -54520944 + FLAM_C SINE Alu 2 117 -16 11056 52 5 12 chr20 17632943 17635155 -54518727 - L1PA6 LINE L1 0 6154 3961 659 170 191 0 chr20 17635172 17635319 -54518563 + FRAM SINE Alu 1 169 -7 3875 231 49 63 chr20 17635331 17636060 -54517822 - L1ME LINE L1 -1306 4840 4102 257 83 0 0 chr20 17636060 17636096 -54517786 - U2 snRNA snRNA -152 36 1 3875 231 49 63 chr20 17636096 17636652 -54517230 - L1ME LINE L1 -2044 4102 3541 2233 121 3 0 chr20 17636652 17636949 -54516933 - AluSx SINE Alu -14 298 1 3875 231 49 63 chr20 17636949 17637125 -54516757 - L1ME LINE L1 -2605 3541 3364 413 118 0 26 chr20 17637238 17637314 -54516568 - SVA Other Other -862 524 451 499 228 16 11 chr20 17637322 17637511 -54516371 - L1ME LINE L1 -2793 3353 3164 761 206 23 139 chr20 17637544 17637889 -54515993 + LTR41 LTR ERVL 463 767 -6 588 237 348 27 chr20 17638060 17638294 -54515588 - MLT1G1 LTR MaLR -34 561 403 2255 108 0 3 chr20 17638294 17638589 -54515293 - AluSq SINE Alu -19 294 1 588 237 348 27 chr20 17638589 17638725 -54515157 - MLT1G1 LTR MaLR -192 403 72 664 291 115 62 chr20 17639029 17639497 -54514385 + MLT1J LTR MaLR 18 510 -1 476 16 0 16 chr20 17640128 17640190 -54513692 + MSTB2 LTR MaLR 15 75 -382 22 56 0 0 chr20 17640330 17640366 -54513516 + AT_rich Low_complexity Low_complexity 1 36 0 2178 104 0 13 chr20 17640589 17640896 -54512986 + AluSx SINE Alu 1 303 -9 244 95 24 0 chr20 17640973 17641015 -54512867 - MLT1K LTR MaLR -22 566 524 1817 162 24 0 chr20 17641307 17641603 -54512279 + AluJo SINE Alu 1 303 -9 597 296 66 12 chr20 17642320 17642577 -54511305 + L1MC4 LINE L1 7642 7912 -130 1646 151 21 42 chr20 17642584 17642868 -54511014 + AluJo SINE Alu 34 311 -1 30 45 0 0 chr20 17642947 17642991 -54510891 + AT_rich Low_complexity Low_complexity 1 44 0 648 258 145 33 chr20 17643988 17644353 -54509529 + MLT1I LTR MaLR 4 409 0 652 297 11 11 chr20 17644743 17644928 -54508954 + MIR SINE MIR 7 191 -71 2202 116 3 3 chr20 17646545 17646848 -54507034 + AluSq SINE Alu 1 303 -10 825 234 20 5 chr20 17647347 17647548 -54506334 + MER63A DNA MER1_type 7 210 0 414 221 77 0 chr20 17647551 17647655 -54506227 - MER115 DNA AcHobo -29 664 553 566 92 11 0 chr20 17647656 17647743 -54506139 - MSTB LTR MaLR 0 432 345 1484 193 43 15 chr20 17647914 17648241 -54505641 - MSTB LTR MaLR -90 336 1 295 80 21 0 chr20 17648281 17648323 -54505559 - MLT2B1 LTR ERVL 0 520 480 216 0 0 0 chr20 17648323 17648347 -54505535 + (TG)n Simple_repeat Simple_repeat 2 25 0 2117 90 7 0 chr20 17648381 17648696 -54505186 - AluSg SINE Alu 0 319 3 348 159 0 4 chr20 17648702 17648773 -54505109 - Alu SINE Alu -255 53 1 426 227 21 43 chr20 17649017 17649158 -54504724 - L1ME LINE L1 -433 5737 5600 327 335 26 9 chr20 17649911 17650042 -54503840 - MIR SINE MIR -63 145 30 447 278 0 80 chr20 17651030 17651206 -54502676 + MLT1K LTR MaLR 100 261 -327 2204 137 6 6 chr20 17651399 17651736 -54502146 - MER1B DNA MER1_type 0 337 1 307 223 10 10 chr20 17651759 17651862 -54502020 + CT-rich Low_complexity Low_complexity 2 104 0 354 183 151 11 chr20 17652867 17652960 -54500922 - MLT1K LTR MaLR 0 588 483 2325 131 54 47 chr20 17653043 17653156 -54500726 + L1MB5 LINE L1 5695 5806 -368 2438 103 0 0 chr20 17653156 17653466 -54500416 + AluSx SINE Alu 1 310 -2 2353 87 7 0 chr20 17653466 17653764 -54500118 + AluSx SINE Alu 1 300 -12 2325 131 54 47 chr20 17653764 17654114 -54499768 + L1MB5 LINE L1 5805 6162 -12 1976 121 55 21 chr20 17654141 17654430 -54499452 - AluSx SINE Alu -13 299 1 520 196 0 26 chr20 17654510 17654657 -54499225 - L1MC5 LINE L1 0 8042 7832 685 199 10 2 chr20 17654657 17655069 -54498813 + CT-rich Low_complexity Low_complexity 1 414 0 182 224 0 13 chr20 17655074 17655150 -54498732 + (TA)n Simple_repeat Simple_repeat 2 76 0 1240 170 142 42 chr20 17655247 17655577 -54498305 + MLT1A1 LTR MaLR 1 363 -2 927 277 64 17 chr20 17656518 17656814 -54497068 - LTR16C LTR ERVL -4 487 178 201 263 47 53 chr20 17656958 17657052 -54496830 - MIR SINE MIR -65 143 76 298 200 29 0 chr20 17657062 17657132 -54496750 - MLT1K LTR MaLR -36 552 481 1414 199 39 19 chr20 17657134 17657441 -54496441 - MSTD LTR MaLR 0 396 84 893 112 8 0 chr20 17657451 17657576 -54496306 + AluSg/x SINE Alu 173 298 -14 2409 109 0 0 chr20 17657624 17657937 -54495945 - AluSq SINE Alu 0 313 1 234 180 80 0 chr20 17657937 17657987 -54495895 - MSTD LTR MaLR -374 54 1 2116 111 7 0 chr20 17658153 17658453 -54495429 + AluSx SINE Alu 1 302 0 1564 167 40 11 chr20 17658471 17658746 -54495136 + AluJo SINE Alu 17 299 -13 41 48 0 0 chr20 17658776 17658838 -54495044 + AT_rich Low_complexity Low_complexity 1 62 0 2594 78 0 0 chr20 17659427 17659736 -54494146 + AluSc SINE Alu 1 309 0 847 282 84 3 chr20 17659767 17660065 -54493817 - LTR16A LTR ERVL -6 444 123 186 246 72 43 chr20 17660097 17660166 -54493716 + L2 LINE L2 2260 2330 -984 2414 50 0 13 chr20 17660466 17660764 -54493118 - AluY SINE Alu -17 294 1 431 278 63 40 chr20 17661105 17661288 -54492594 + MIR3 SINE MIR 1 184 -24 584 258 32 32 chr20 17661745 17661935 -54491947 - MLT1K LTR MaLR -8 580 391 324 286 36 0 chr20 17661941 17662025 -54491857 - L2 LINE L2 0 3313 3227 974 256 101 19 chr20 17662105 17662506 -54491376 - L2 LINE L2 -103 3210 2253 446 271 184 31 chr20 17662585 17662840 -54491042 - MLT1K LTR MaLR -280 308 15 528 223 108 68 chr20 17663101 17663345 -54490537 - MLT1F LTR MaLR 0 549 316 2308 107 10 0 chr20 17663345 17663655 -54490227 - AluSp SINE Alu 0 313 1 528 223 108 68 chr20 17663655 17663890 -54489992 - MLT1F LTR MaLR -233 316 1 283 249 111 142 chr20 17664115 17664174 -54489708 - LTR16C LTR ERVL -1 490 431 1559 150 26 19 chr20 17664174 17664441 -54489441 - AluJb SINE Alu -21 291 23 283 249 111 142 chr20 17664441 17664457 -54489425 - LTR16C LTR ERVL -60 431 416 1843 171 10 0 chr20 17664457 17664755 -54489127 - AluJb SINE Alu -11 301 1 2155 121 0 3 chr20 17664760 17665057 -54488825 - AluSx SINE Alu -14 298 3 283 249 111 142 chr20 17665057 17665227 -54488655 - LTR16C LTR ERVL -79 412 246 1156 89 11 11 chr20 17665231 17665307 -54488575 + (TTTC)n Simple_repeat Simple_repeat 1 256 0 1156 89 11 11 chr20 17665307 17665487 -54488395 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2177 111 3 10 chr20 17665523 17665829 -54488053 - AluSq SINE Alu 0 313 10 2351 115 70 50 chr20 17666449 17666656 -54487226 - THE1B LTR MaLR 0 364 146 2535 69 0 0 chr20 17666656 17666961 -54486921 + AluY SINE Alu 1 305 -6 2351 115 70 50 chr20 17666961 17667110 -54486772 - THE1B LTR MaLR -218 146 1 472 293 118 24 chr20 17667270 17667482 -54486400 + MLT1K LTR MaLR 315 546 -42 1233 241 21 45 chr20 17667759 17668140 -54485742 + L1MC4a LINE L1 7435 7806 -2 271 205 39 0 chr20 17669346 17669424 -54484458 + GA-rich Low_complexity Low_complexity 3 83 0 8301 159 35 54 chr20 17669700 17670728 -54483154 + L1MCa LINE L1 7 1052 -5374 2078 110 0 11 chr20 17670728 17671009 -54482873 + AluSq SINE Alu 1 278 -35 8301 159 35 54 chr20 17671009 17671177 -54482705 + L1MCa LINE L1 1052 1222 -5204 261 0 0 0 chr20 17671177 17671206 -54482676 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8301 159 35 54 chr20 17671206 17671783 -54482099 + L1MCa LINE L1 1222 1862 -4564 2210 113 0 10 chr20 17671783 17672092 -54481790 + AluSx SINE Alu 1 306 -6 2839 233 9 68 chr20 17672100 17672125 -54481757 + L1MCa LINE L1 2477 2502 -3924 2078 148 83 3 chr20 17672125 17672464 -54481418 + MER47A DNA MER2_type 1 366 0 2839 233 9 68 chr20 17672464 17672575 -54481307 + L1MCa LINE L1 2502 2618 -3808 2018 109 35 3 chr20 17672575 17672858 -54481024 + AluSc SINE Alu 1 292 -17 2839 233 9 68 chr20 17672858 17673412 -54480470 + L1MCa LINE L1 2618 3203 -3223 2408 104 0 0 chr20 17673412 17673721 -54480161 + AluSx SINE Alu 4 312 0 2839 233 9 68 chr20 17673721 17673839 -54480043 + L1MCa LINE L1 3203 3221 -3205 2233 87 38 0 chr20 17673839 17674126 -54479756 - AluSq SINE Alu -15 298 1 2839 233 9 68 chr20 17674126 17674307 -54479575 + L1MCa LINE L1 3221 3411 -3015 248 336 62 31 chr20 17674790 17674918 -54478964 + LTR67 LTR ERVL 142 273 -284 359 259 102 0 chr20 17675002 17675110 -54478772 + LTR67 LTR ERVL 439 557 0 2445 97 0 0 chr20 17675258 17675567 -54478315 + AluSq SINE Alu 1 309 -4 356 0 23 0 chr20 17675711 17675755 -54478127 + (GA)n Simple_repeat Simple_repeat 2 46 0 1072 193 0 10 chr20 17675764 17675961 -54477921 + AluJo SINE Alu 3 197 -115 970 170 12 0 chr20 17676259 17676458 -54477424 + AluJb SINE Alu 121 321 0 1994 134 0 3 chr20 17676464 17676776 -54477106 + AluSx SINE Alu 3 313 0 4030 151 77 59 chr20 17676776 17677114 -54476768 + L1MC2 LINE L1 5443 5774 -570 1670 146 4 0 chr20 17677114 17677368 -54476514 + AluSx SINE Alu 1 255 -57 4030 151 77 59 chr20 17677368 17677734 -54476148 + L1MC2 LINE L1 5774 6168 -176 2147 102 0 3 chr20 17677734 17678045 -54475837 + AluSx SINE Alu 1 310 0 4030 151 77 59 chr20 17678045 17678214 -54475668 + L1MC2 LINE L1 6168 6333 -11 226 250 0 0 chr20 17678540 17678596 -54475286 + MIR SINE MIR 97 152 -110 2227 106 0 0 chr20 17678610 17678926 -54474956 - AluSq SINE Alu 0 316 1 1926 137 0 65 chr20 17679609 17679931 -54473951 - AluSx SINE Alu -11 301 1 1984 101 18 7 chr20 17679957 17680261 -54473621 + AluSc SINE Alu 1 307 0 889 206 5 57 chr20 17680307 17680375 -54473507 + MER5A DNA MER1_type 6 76 -113 2140 121 44 0 chr20 17680375 17680673 -54473209 + AluSx SINE Alu 1 311 -1 889 206 5 57 chr20 17680673 17680798 -54473084 + MER5A DNA MER1_type 76 189 0 3239 260 119 38 chr20 17680805 17681248 -54472634 + L2 LINE L2 1567 1973 -1340 2112 139 0 0 chr20 17681248 17681549 -54472333 - AluSx SINE Alu -11 301 1 3239 260 119 38 chr20 17681549 17682150 -54471732 + L2 LINE L2 1973 2524 -789 1919 142 0 39 chr20 17682150 17682460 -54471422 - AluSx SINE Alu -14 298 1 3239 260 119 38 chr20 17682460 17682518 -54471364 + L2 LINE L2 2524 2576 -737 2162 125 3 3 chr20 17682518 17682829 -54471053 - AluSx SINE Alu -1 311 1 3239 260 119 38 chr20 17682829 17683067 -54470815 + L2 LINE L2 2576 2793 -520 2165 117 3 0 chr20 17683067 17683365 -54470517 - AluSx SINE Alu -13 299 1 3239 260 119 38 chr20 17683365 17683635 -54470247 + L2 LINE L2 2793 3306 -7 2178 177 52 74 chr20 17684189 17684255 -54469627 - MLT1D LTR MaLR -2 503 437 2223 124 3 0 chr20 17684255 17684561 -54469321 + AluSx SINE Alu 1 307 -5 2178 177 52 74 chr20 17684561 17685008 -54468874 - MLT1D LTR MaLR -68 437 1 207 0 0 0 chr20 17685063 17685086 -54468796 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2208 112 20 0 chr20 17685223 17685518 -54468364 + AluSx SINE Alu 1 301 -11 949 304 33 18 chr20 17686109 17686505 -54467377 - LTR16A1 LTR ERVL -1 456 73 5215 134 9 36 chr20 17687521 17687742 -54466140 + LTR39 LTR ERV1 3 229 -554 1521 87 0 5 chr20 17687742 17687938 -54465944 - AluSx SINE Alu -117 195 1 5215 134 9 36 chr20 17687938 17688146 -54465736 + LTR39 LTR ERV1 229 441 -342 2123 94 45 0 chr20 17688146 17688434 -54465448 - AluSp SINE Alu -12 301 1 5215 134 9 36 chr20 17688434 17688806 -54465076 + LTR39 LTR ERV1 441 783 0 2151 108 3 0 chr20 17688887 17689173 -54464709 - AluSx SINE Alu -25 287 1 370 309 29 15 chr20 17689247 17689383 -54464499 + MIR3 SINE MIR 20 157 -51 339 115 0 0 chr20 17689383 17689435 -54464447 - MLT1K LTR MaLR 0 588 537 561 169 0 0 chr20 17689458 17689541 -54464341 + AluJ/FLAM SINE Alu 5 87 -225 201 154 0 0 chr20 17689551 17689590 -54464292 + GA-rich Low_complexity Low_complexity 2 40 0 491 265 134 67 chr20 17689606 17689919 -54463963 - MLT1K LTR MaLR -122 466 133 196 243 57 29 chr20 17690092 17690162 -54463720 + L2 LINE L2 3201 3272 0 2013 128 28 0 chr20 17690379 17690667 -54463215 + AluSx SINE Alu 1 296 -16 237 132 0 0 chr20 17691297 17691335 -54462547 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 1755 132 0 0 chr20 17691393 17691643 -54462239 + AluSx SINE Alu 39 288 -24 285 308 30 23 chr20 17691813 17691946 -54461936 - LTR16C LTR ERVL 0 491 358 253 139 23 0 chr20 17692336 17692379 -54461503 + Tigger1 DNA MER2_type 2030 2073 -345 2318 99 0 0 chr20 17692379 17692682 -54461200 - AluSq SINE Alu -10 303 1 2233 104 10 0 chr20 17692726 17693015 -54460867 + AluSx SINE Alu 1 292 -20 832 164 0 8 chr20 17693049 17693177 -54460705 + FLAM_C SINE Alu 1 127 -6 2004 102 6 75 chr20 17693453 17693785 -54460097 - AluSg SINE Alu -1 309 1 233 226 20 69 chr20 17694191 17694293 -54459589 + LTR67 LTR ERVL 457 553 -4 2183 82 14 0 chr20 17694380 17694692 -54459190 + AluSx SINE Alu 1 316 0 6923 186 11 0 chr20 17694692 17695008 -54458874 + L1PA15 LINE L1 4001 4312 -1853 2097 102 20 10 chr20 17695008 17695301 -54458581 - AluSq SINE Alu -5 308 13 6923 186 11 0 chr20 17695301 17697169 -54456713 + L1PA15 LINE L1 4312 6162 -3 434 228 209 13 chr20 17697170 17697474 -54456408 + L1ME3A LINE L1 5755 6165 -5 1022 186 0 0 chr20 17697499 17697676 -54456206 + FRAM SINE Alu 1 175 -1 271 310 75 32 chr20 17697681 17697868 -54456014 - L2 LINE L2 -95 3218 3024 353 254 67 30 chr20 17698422 17698587 -54455295 - MLT1K LTR MaLR -416 172 2 1199 182 250 5 chr20 17698647 17699132 -54454750 + MLT1E1 LTR MaLR 2 649 -5 2178 126 0 0 chr20 17699513 17699815 -54454067 + AluSx SINE Alu 1 302 -10 673 220 57 0 chr20 17700037 17700178 -54453704 - MLT1G LTR MaLR -1 589 441 363 264 0 0 chr20 17700178 17700269 -54453613 - MLT1-int LTR MaLR -996 375 285 1488 196 37 21 chr20 17700584 17700722 -54453160 - Charlie1 DNA MER1_type 0 2761 2627 2243 103 3 3 chr20 17700722 17701034 -54452848 + AluSx SINE Alu 1 312 0 1488 196 37 21 chr20 17701034 17701273 -54452609 - Charlie1 DNA MER1_type -134 2627 2378 243 290 33 66 chr20 17702232 17702415 -54451467 - L2 LINE L2 -1162 2152 1976 4967 152 112 19 chr20 17702802 17704018 -54449864 - L1MB7 LINE L1 -13 6171 4815 395 244 70 35 chr20 17704012 17704184 -54449698 - L1ME LINE L1 -346 5775 5598 * 2321 94 0 44 chr20 17704252 17704571 -54449311 + AluSx SINE Alu 1 305 -7 2236 125 0 0 chr20 17705024 17705328 -54448554 + AluSx SINE Alu 1 304 -8 2828 152 46 33 chr20 17705576 17705661 -54448221 - L1MB7 LINE L1 -45 6139 6057 2371 83 3 0 chr20 17705661 17705963 -54447919 - AluSp SINE Alu -8 305 3 2280 100 7 0 chr20 17705965 17706264 -54447618 - AluSq SINE Alu -12 301 1 2828 152 46 33 chr20 17706264 17706722 -54447160 - L1MB7 LINE L1 -127 6057 5586 33 0 0 0 chr20 17707264 17707297 -54446585 + AT_rich Low_complexity Low_complexity 1 33 0 419 269 159 15 chr20 17707618 17707882 -54446000 - L1MB7 LINE L1 -2210 5598 5297 2325 77 13 19 chr20 17708317 17708629 -54445253 - AluSg SINE Alu 0 310 1 2038 94 47 0 chr20 17708650 17708927 -54444955 - AluSg SINE Alu -20 290 1 21 0 0 0 chr20 17708940 17708961 -54444921 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr20 17709471 17709535 -54444347 + AT_rich Low_complexity Low_complexity 1 64 0 292 236 111 65 chr20 17709579 17709778 -54444104 - MER5C DNA MER1_type 0 324 117 207 171 0 0 chr20 17709958 17709993 -54443889 + T-rich Low_complexity Low_complexity 4 38 0 2263 99 10 7 chr20 17710001 17710305 -54443577 - AluSx SINE Alu -7 305 1 21 0 0 0 chr20 17710399 17710420 -54443462 + AT_rich Low_complexity Low_complexity 1 21 0 861 121 0 0 chr20 17711115 17711239 -54442643 + AluSg/x SINE Alu 176 299 -13 2255 123 7 0 chr20 17711326 17711628 -54442254 - AluSq SINE Alu -9 304 1 288 299 25 83 chr20 17711628 17711785 -54442097 - MIR3 SINE MIR -56 152 5 323 339 55 0 chr20 17712227 17712336 -54441546 - MIR SINE MIR -92 116 2 2906 135 19 19 chr20 17712534 17712962 -54440920 - LTR24 LTR ERV1 0 467 37 1989 86 75 7 chr20 17712962 17713242 -54440640 - AluSq SINE Alu -14 299 1 2906 135 19 19 chr20 17713242 17713280 -54440602 - LTR24 LTR ERV1 -429 38 1 836 228 130 16 chr20 17713489 17713796 -54440086 + MER113 DNA MER1_type? 6 347 -174 1921 152 0 7 chr20 17714266 17714569 -54439313 - AluSx SINE Alu -11 301 1 26 0 0 0 chr20 17715867 17715893 -54437989 + AT_rich Low_complexity Low_complexity 1 26 0 634 231 64 54 chr20 17718377 17718580 -54435302 + MIR SINE MIR 58 262 0 23 0 0 0 chr20 17719253 17719276 -54434606 + AT_rich Low_complexity Low_complexity 1 23 0 2120 105 0 24 chr20 17719276 17719570 -54434312 - AluSx SINE Alu -25 287 1 360 64 0 0 chr20 17720399 17720446 -54433436 + (TG)n Simple_repeat Simple_repeat 2 48 0 2003 92 0 98 chr20 17721514 17721841 -54432041 + AluSg SINE Alu 1 295 -15 22 35 0 0 chr20 17722225 17722254 -54431628 + AT_rich Low_complexity Low_complexity 1 29 0 2100 123 0 10 chr20 17722282 17722584 -54431298 - AluSx SINE Alu -13 299 1 207 114 0 0 chr20 17724616 17724651 -54429231 + (TG)n Simple_repeat Simple_repeat 2 36 0 2431 77 3 0 chr20 17724909 17725209 -54428673 + AluY SINE Alu 1 301 -10 25 0 0 0 chr20 17726147 17726172 -54427710 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr20 17728183 17728220 -54425662 + (TG)n Simple_repeat Simple_repeat 2 38 0 622 269 31 16 chr20 17728781 17728974 -54424908 + Charlie8 DNA MER1_type 41 236 -2181 216 267 55 64 chr20 17729873 17729992 -54423890 + MER5B DNA MER1_type 7 132 -57 370 165 144 0 chr20 17730016 17730113 -54423769 - L1MD1 LINE L1 -10 6232 6122 1073 181 52 44 chr20 17730163 17730433 -54423449 - L1ME3A LINE L1 -19 6151 5880 * 3498 192 42 49 chr20 17730428 17731003 -54422879 - L1MB5 LINE L1 -1 6173 5605 2278 91 7 13 chr20 17731003 17731310 -54422572 - AluSq SINE Alu -8 305 1 3498 192 42 49 chr20 17731310 17731660 -54422222 - L1MB5 LINE L1 -569 5605 5254 475 261 27 53 chr20 17731750 17731938 -54421944 + L2 LINE L2 3077 3259 -54 1830 192 3 6 chr20 17731940 17732274 -54421608 + MER58B DNA MER1_type 1 333 -8 192 129 0 0 chr20 17732283 17732314 -54421568 + L2 LINE L2 3281 3311 -2 1390 143 4 39 chr20 17732722 17732953 -54420929 - AluSg/x SINE Alu -15 295 73 1077 243 48 54 chr20 17733792 17733883 -54419999 - L2 LINE L2 -1 3312 3222 2549 63 0 0 chr20 17733883 17734186 -54419696 - AluY SINE Alu -8 303 1 1077 243 48 54 chr20 17734186 17734465 -54419417 - L2 LINE L2 -91 3222 2944 255 61 0 0 chr20 17734555 17734588 -54419294 + (CA)n Simple_repeat Simple_repeat 2 34 0 812 253 81 23 chr20 17734658 17734919 -54418963 - L2 LINE L2 -358 2956 2681 33 0 0 0 chr20 17734991 17735024 -54418858 + AT_rich Low_complexity Low_complexity 1 33 0 1345 178 23 23 chr20 17735024 17735282 -54418600 - AluJo SINE Alu -20 292 35 1573 207 21 0 chr20 17735364 17735692 -54418190 - L1ME1 LINE L1 -5 6230 5896 264 59 0 0 chr20 17735694 17735728 -54418154 + (TA)n Simple_repeat Simple_repeat 2 35 0 979 209 75 41 chr20 17735755 17736023 -54417859 - L1ME1 LINE L1 -488 5747 5471 2366 161 8 62 chr20 17736024 17736119 -54417763 - MER31A LTR ERV1 0 485 386 2439 184 12 5 chr20 17736119 17736542 -54417340 - MSTB LTR MaLR 0 426 1 2366 161 8 62 chr20 17736542 17736948 -54416934 - MER31A LTR ERV1 -99 386 11 325 188 145 16 chr20 17736954 17737140 -54416742 - L1ME1 LINE L1 -743 5472 5265 1693 188 0 13 chr20 17737153 17737456 -54416426 - AluJb SINE Alu -13 299 1 2186 138 0 0 chr20 17737458 17737763 -54416119 - AluSx SINE Alu -7 305 1 5801 147 29 57 chr20 17737775 17737835 -54416047 - L1MC3 LINE L1 -8 7777 7717 2323 125 9 9 chr20 17737835 17738172 -54415710 + MER1B DNA MER1_type 1 337 0 5801 147 29 57 chr20 17738172 17738533 -54415349 - L1MC3 LINE L1 -68 7717 7347 2469 67 0 10 chr20 17738533 17738846 -54415036 + AluY SINE Alu 1 310 -1 5801 147 29 57 chr20 17738846 17739415 -54414467 - L1MC3 LINE L1 -438 7347 6825 1885 132 3 33 chr20 17739415 17739718 -54414164 - AluJb SINE Alu -18 294 1 5801 147 29 57 chr20 17739718 17739950 -54413932 - L1MC3 LINE L1 -960 6825 6588 2221 215 136 16 chr20 17739961 17740775 -54413107 - L1ME1 LINE L1 -952 5263 4352 593 174 12 72 chr20 17740868 17741035 -54412847 - L1ME1 LINE L1 -2154 4061 3905 * 38625 80 7 8 chr20 17741023 17744324 -54409558 - L1PA6 LINE L1 -4 6150 2865 2293 71 14 7 chr20 17744324 17744620 -54409262 - AluSp SINE Alu -14 299 2 38625 80 7 8 chr20 17744620 17747472 -54406410 - L1PA6 LINE L1 -3289 2865 11 334 239 0 0 chr20 17747488 17747559 -54406323 - L1ME1 LINE L1 -2303 3912 3842 849 234 80 18 chr20 17747564 17747838 -54406044 - L1M4 LINE L1 -2148 3998 3708 751 229 53 33 chr20 17747856 17748157 -54405725 + L1M4 LINE L1 3000 3306 -2840 2212 279 49 53 chr20 17748247 17748299 -54405583 - L1ME1 LINE L1 -4091 2305 2254 2195 112 7 0 chr20 17748299 17748595 -54405287 - AluSq SINE Alu -15 298 1 2212 279 49 53 chr20 17748595 17749817 -54404065 - L1ME1 LINE L1 -4142 2254 1035 2246 117 0 0 chr20 17749817 17750124 -54403758 - AluSg SINE Alu -1 309 3 2212 279 49 53 chr20 17750124 17750341 -54403541 - L1ME1 LINE L1 -5361 1035 819 579 188 36 11 chr20 17750342 17750459 -54403423 - L1P1 LINE L1 -644 5511 5389 2094 129 0 7 chr20 17750459 17750762 -54403120 - AluSx SINE Alu -11 301 1 579 188 36 11 chr20 17750762 17750778 -54403104 - L1P1 LINE L1 -766 5389 5375 399 197 0 0 chr20 17750787 17750858 -54403024 - AluJo SINE Alu 0 302 232 4708 206 68 32 chr20 17750858 17751354 -54402528 - L1M4 LINE L1 -756 5390 4913 2412 77 0 3 chr20 17751354 17751654 -54402228 + AluY SINE Alu 1 299 -12 4708 206 68 32 chr20 17751654 17752350 -54401532 - L1M4 LINE L1 -1233 4913 4143 865 74 15 7 chr20 17752350 17752485 -54401397 + (TTCC)n Simple_repeat Simple_repeat 3 138 0 4708 206 68 32 chr20 17752485 17752622 -54401260 - L1M4 LINE L1 -2003 4143 4012 1317 202 4 4 chr20 17752625 17752868 -54401014 - AluJo SINE Alu -69 243 1 1041 271 77 14 chr20 17752873 17753301 -54400581 - L1M4 LINE L1 -2130 4016 3562 23 78 0 0 chr20 17753908 17753959 -54399923 + AT_rich Low_complexity Low_complexity 1 51 0 1612 229 82 99 chr20 17754021 17754515 -54399367 - L1ME3 LINE L1 -7 6155 5654 424 106 0 0 chr20 17754515 17754581 -54399301 - Alu SINE Alu -8 303 238 2103 119 0 0 chr20 17754581 17754859 -54399023 - AluSx SINE Alu -34 278 1 1612 229 82 99 chr20 17754859 17755656 -54398226 - L1ME3 LINE L1 -506 5656 4823 276 270 145 21 chr20 17755678 17755919 -54397963 - L1ME3 LINE L1 -2509 3637 3367 946 243 12 0 chr20 17755920 17756175 -54397707 - L1ME3 LINE L1 -3296 2850 2593 287 225 18 63 chr20 17756182 17756293 -54397589 - L1MC/D LINE L1 -2377 5431 5326 2051 108 11 18 chr20 17756605 17756912 -54396970 - AluSx SINE Alu 0 305 1 251 270 0 0 chr20 17756913 17756976 -54396906 - MIR SINE MIR -51 211 149 445 165 155 10 chr20 17757042 17757139 -54396743 - MIR SINE MIR -66 196 86 358 311 145 4 chr20 17757147 17757382 -54396500 - LTR41 LTR ERVL -6 767 500 948 157 6 17 chr20 17757771 17757943 -54395939 - LTR41 LTR ERVL -603 170 1 23 108 0 0 chr20 17758345 17758438 -54395444 + AT_rich Low_complexity Low_complexity 1 93 0 290 328 113 34 chr20 17758749 17758953 -54394929 + MIR SINE MIR 12 231 -31 236 269 0 0 chr20 17758980 17759032 -54394850 + (CAT)n Simple_repeat Simple_repeat 1 52 0 21 0 0 0 chr20 17759708 17759729 -54394153 + AT_rich Low_complexity Low_complexity 1 21 0 2013 147 0 3 chr20 17760235 17760548 -54393334 - AluJo SINE Alu 0 312 1 2186 65 61 0 chr20 17761061 17761340 -54392542 + AluY SINE Alu 1 296 -15 370 274 98 52 chr20 17761748 17762076 -54391806 + L1M4 LINE L1 4632 4974 -1172 338 292 98 31 chr20 17762289 17762812 -54391070 + L1M4 LINE L1 5213 5779 -399 1396 221 40 48 chr20 17762897 17763268 -54390614 - MLT1A2 LTR MaLR -4 370 3 22 0 0 0 chr20 17763867 17763889 -54389993 + AT_rich Low_complexity Low_complexity 1 22 0 251 280 20 0 chr20 17763949 17764049 -54389833 - L1M4 LINE L1 -1458 4688 4587 647 235 55 18 chr20 17764086 17764303 -54389579 - L1M4 LINE L1 -1676 4470 4246 766 118 7 15 chr20 17764314 17764449 -54389433 + (TTTC)n Simple_repeat Simple_repeat 4 137 0 370 143 0 0 chr20 17764449 17764505 -54389377 + (TCCCC)n Simple_repeat Simple_repeat 1 56 0 1930 119 37 0 chr20 17764514 17764782 -54389100 - AluSx SINE Alu -34 278 1 1877 237 37 19 chr20 17764782 17765058 -54388824 - L1M4 LINE L1 -1904 4242 3972 2178 155 19 14 chr20 17765058 17765420 -54388462 - THE1B LTR MaLR 0 364 1 1877 237 37 19 chr20 17765420 17765716 -54388166 - L1M4 LINE L1 -2174 3972 3660 3566 242 54 51 chr20 17765725 17767044 -54386838 - L1MEc LINE L1 -5039 1357 35 768 119 16 61 chr20 17767223 17767485 -54386397 - MLT1A1 LTR MaLR -18 347 19 2321 102 0 7 chr20 17768006 17768310 -54385572 - AluSx SINE Alu -10 302 1 1386 277 81 42 chr20 17768480 17769259 -54384623 - L2 LINE L2 -16 3297 2495 22 0 0 0 chr20 17769617 17769639 -54384243 + AT_rich Low_complexity Low_complexity 1 22 0 216 67 0 0 chr20 17771493 17771523 -54382359 + (GA)n Simple_repeat Simple_repeat 1 30 0 348 302 130 12 chr20 17771881 17772219 -54381663 + L1ME4a LINE L1 5528 5905 -216 30 45 0 0 chr20 17772265 17772309 -54381573 + AT_rich Low_complexity Low_complexity 1 44 0 1037 174 0 0 chr20 17772395 17772556 -54381326 + FRAM SINE Alu 1 156 -20 530 225 105 29 chr20 17772738 17772947 -54380935 - HAL1 LINE L1 -561 1946 1722 515 285 116 12 chr20 17772961 17773280 -54380602 - HAL1 LINE L1 -925 1582 1231 5044 111 19 1 chr20 17773290 17774037 -54379845 - L1PA13 LINE L1 -19 6144 5385 1446 140 51 35 chr20 17774035 17774350 -54379532 - L1MD1 LINE L1 -248 5994 5675 * 6646 202 63 78 chr20 17774355 17775686 -54378196 - L1MB3 LINE L1 0 6419 5070 2163 111 3 20 chr20 17775686 17775992 -54377890 - AluSx SINE Alu -11 301 1 6646 202 63 78 chr20 17775992 17776908 -54376974 - L1MB3 LINE L1 -1349 5070 4142 916 111 0 22 chr20 17776908 17777043 -54376839 + FLAM_C SINE Alu 2 133 0 6646 202 63 78 chr20 17777043 17777728 -54376154 - L1MB3 LINE L1 -2277 4142 3448 425 103 15 0 chr20 17777728 17777796 -54376086 + (CA)n Simple_repeat Simple_repeat 2 70 0 6646 202 63 78 chr20 17777796 17777821 -54376061 - L1MB3 LINE L1 -2971 3448 3424 1992 155 7 0 chr20 17777821 17778117 -54375765 - AluJb SINE Alu -14 298 1 6646 202 63 78 chr20 17778117 17778776 -54375106 - L1MB3 LINE L1 -2995 3424 2865 3957 170 123 25 chr20 17778786 17779045 -54374837 - L1MB3 LINE L1 -4144 2240 2008 2109 137 0 3 chr20 17779045 17779351 -54374531 + AluSx SINE Alu 1 305 -7 3957 170 123 25 chr20 17779351 17780071 -54373811 - L1MB3 LINE L1 -4376 2008 1247 433 271 59 77 chr20 17780521 17780960 -54372922 - L1MEd LINE L1 -5088 1031 601 375 353 60 57 chr20 17781145 17781547 -54372335 - L1MEd LINE L1 -5701 418 16 27 62 0 0 chr20 17781548 17781596 -54372286 + AT_rich Low_complexity Low_complexity 1 48 0 1114 169 59 98 chr20 17781787 17782194 -54371688 - Charlie5 DNA MER1_type 0 2616 2226 410 224 0 0 chr20 17782189 17782287 -54371595 - Charlie5 DNA MER1_type -2505 107 10 * 1806 161 33 3 chr20 17782840 17783139 -54370743 + AluJb SINE Alu 1 308 -4 1566 209 98 5 chr20 17783161 17783581 -54370301 - L1ME2 LINE L1 -37 6127 5669 848 280 66 96 chr20 17783678 17784616 -54369266 - L2 LINE L2 -45 3268 2365 5989 146 12 17 chr20 17784805 17785305 -54368577 + Tigger1 DNA MER2_type 1404 1905 -513 2440 85 0 0 chr20 17785305 17785610 -54368272 - AluSx SINE Alu -7 305 1 5989 146 12 17 chr20 17785610 17786129 -54367753 + Tigger1 DNA MER2_type 1905 2418 0 255 290 124 88 chr20 17786372 17786768 -54367114 - MLT1L LTR MaLR -9 606 197 * 268 231 0 0 chr20 17786740 17786792 -54367090 - MLT1J2 LTR MaLR -328 122 71 3787 173 115 68 chr20 17787327 17787471 -54366411 - Tigger6a DNA MER2_type -514 1083 947 1736 160 0 31 chr20 17787471 17787758 -54366124 + AluJo SINE Alu 5 282 -30 3787 173 115 68 chr20 17787758 17788643 -54365239 - Tigger6a DNA MER2_type -650 947 6 358 309 0 0 chr20 17788669 17788779 -54365103 - L1MC5 LINE L1 -518 7443 7334 384 22 0 0 chr20 17790525 17790570 -54363312 + (TG)n Simple_repeat Simple_repeat 2 46 0 249 33 0 0 chr20 17791258 17791288 -54362594 + (CA)n Simple_repeat Simple_repeat 2 31 0 360 374 61 0 chr20 17791501 17791664 -54362218 + MIR3 SINE MIR 11 183 -25 284 273 47 62 chr20 17791751 17791879 -54362003 - MER5B DNA MER1_type -1 177 52 226 308 98 30 chr20 17792108 17792241 -54361641 + L2 LINE L2 3172 3313 0 257 346 58 19 chr20 17792375 17792635 -54361247 + L2 LINE L2 2599 2868 -446 380 248 139 36 chr20 17792760 17792897 -54360985 + L2 LINE L2 3160 3310 -3 221 367 33 0 chr20 17794546 17794636 -54359246 - L2 LINE L2 -11 3261 3169 1866 150 3 10 chr20 17797102 17797395 -54356487 - AluSx SINE Alu -21 291 1 204 118 29 0 chr20 17797460 17797494 -54356388 + G-rich Low_complexity Low_complexity 5 39 0 1222 268 109 31 chr20 17797667 17798603 -54355279 - L1MEd LINE L1 -2928 3454 2446 1486 108 0 19 chr20 17798640 17798854 -54355028 - AluSg/x SINE Alu -6 304 95 605 294 71 20 chr20 17798969 17799224 -54354658 - L2 LINE L2 0 3313 3046 312 300 79 66 chr20 17799263 17799490 -54354392 - L1MEd LINE L1 -4650 1734 1505 270 241 139 32 chr20 17799519 17799677 -54354205 - L1MEd LINE L1 -4884 1488 1314 2218 208 61 8 chr20 17799838 17800363 -54353519 - L1ME2 LINE L1 -13 6151 5599 1078 201 5 0 chr20 17801134 17801353 -54352529 - AluJo SINE Alu -2 310 91 2075 106 3 20 chr20 17801659 17801951 -54351931 - AluSx SINE Alu -25 287 1 2188 113 3 7 chr20 17802408 17802709 -54351173 + AluSq SINE Alu 1 300 -13 846 124 41 24 chr20 17803708 17803877 -54350005 + L1MA8 LINE L1 6114 6285 -6 276 273 231 8 chr20 17804470 17804591 -54349291 + MER5A DNA MER1_type 36 183 -6 183 234 0 43 chr20 17807380 17807427 -54346455 + L2 LINE L2 3228 3272 0 725 118 27 0 chr20 17808506 17808616 -54345266 + AluSx SINE Alu 1 113 -199 1217 126 10 43 chr20 17808717 17808747 -54345135 + AluSx SINE Alu 105 134 -176 1812 137 11 7 chr20 17808747 17809025 -54344857 + AluSx SINE Alu 1 279 -33 204 40 0 0 chr20 17809027 17809052 -54344830 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1217 126 10 43 chr20 17809052 17809225 -54344657 + AluSx SINE Alu 135 304 -6 440 321 52 9 chr20 17809374 17809586 -54344296 + MIR SINE MIR 8 228 -34 368 290 153 0 chr20 17809595 17809726 -54344156 - MIR SINE MIR -4 258 108 249 236 18 0 chr20 17810406 17810461 -54343421 + L3 LINE CR1 1058 1113 -464 469 301 257 0 chr20 17810596 17810892 -54342990 + L3 LINE CR1 1178 1549 -28 288 268 43 78 chr20 17811050 17811281 -54342601 - L1MC4a LINE L1 -1916 5892 5670 353 326 86 11 chr20 17811679 17811854 -54342028 + MER5A DNA MER1_type 1 188 -1 2192 113 10 3 chr20 17812462 17812772 -54341110 - AluSx SINE Alu 0 312 1 264 122 0 0 chr20 17813066 17813107 -54340775 + (TG)n Simple_repeat Simple_repeat 1 41 0 26 0 0 0 chr20 17814184 17814210 -54339672 + AT_rich Low_complexity Low_complexity 1 26 0 339 282 241 11 chr20 17815359 17815533 -54338349 + MIR SINE MIR 33 246 -16 489 196 27 0 chr20 17815537 17815649 -54338233 - HsTC2 DNA Tc2 -3 1895 1781 * 1140 256 70 34 chr20 17815638 17816052 -54337830 - HsTC2 DNA Tc2 -1469 429 1 1699 152 0 16 chr20 17816560 17816817 -54337065 - AluJo SINE Alu -31 281 29 3434 271 69 20 chr20 17817511 17818873 -54335009 + L2 LINE L2 1723 3156 -157 210 37 0 0 chr20 17818903 17818930 -54334952 + (TTTAA)n Simple_repeat Simple_repeat 4 30 0 13497 36 1 0 chr20 17818930 17821326 -54332556 - L1PA4 LINE L1 -13 6142 3753 3491 137 7 5 chr20 17821362 17821933 -54331949 - L1PA16 LINE L1 -1 6165 5594 192 40 0 0 chr20 17824032 17824057 -54329825 + (A)n Simple_repeat Simple_repeat 1 25 0 28 0 0 0 chr20 17824616 17824644 -54329238 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr20 17825140 17825163 -54328719 + (T)n Simple_repeat Simple_repeat 1 23 0 461 243 186 7 chr20 17825165 17825305 -54328577 - MER5A DNA MER1_type -21 168 4 186 43 0 0 chr20 17827287 17827310 -54326572 + (TCCC)n Simple_repeat Simple_repeat 3 25 0 192 158 0 26 chr20 17827453 17827491 -54326391 + L2 LINE L2 3273 3309 -4 7099 50 6 7 chr20 17827593 17829111 -54324771 + L1PA5 LINE L1 4637 6154 0 955 267 76 42 chr20 17829229 17829663 -54324219 - MLT1L LTR MaLR -8 607 159 232 347 14 0 chr20 17829876 17829948 -54323934 - MIR SINE MIR 0 262 190 942 88 51 0 chr20 17830614 17830751 -54323131 - L1PA15 LINE L1 -3 6162 6019 255 187 0 110 chr20 17830751 17830786 -54323096 + L1P LINE L1 4432 4469 -1677 2153 111 13 7 chr20 17830786 17831092 -54322790 + AluSg SINE Alu 1 308 -2 255 187 0 110 chr20 17831092 17831147 -54322735 + L1P LINE L1 4469 4512 -1634 * 13037 210 69 40 chr20 17831144 17831548 -54322334 - L1MA4 LINE L1 -72 6292 5901 351 0 0 0 chr20 17831548 17831587 -54322295 + (CA)n Simple_repeat Simple_repeat 1 39 0 198 0 0 0 chr20 17831591 17831613 -54322269 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 13037 210 69 40 chr20 17831613 17832128 -54321754 - L1MA4 LINE L1 -465 5899 5400 1512 146 0 0 chr20 17832128 17832361 -54321521 - MER46A DNA MER2_type 0 236 4 13037 210 69 40 chr20 17832361 17833159 -54320723 - L1MA4 LINE L1 -964 5400 4627 1798 169 13 3 chr20 17833159 17833461 -54320421 - AluJo SINE Alu -7 305 1 13037 210 69 40 chr20 17833461 17838003 -54315879 - L1MA4 LINE L1 -1737 4627 1 385 260 42 20 chr20 17838194 17838388 -54315494 - L1ME1 LINE L1 -219 5951 5753 * 495 250 31 21 chr20 17838380 17838572 -54315310 - L1MC5 LINE L1 -810 7151 6958 216 184 0 69 chr20 17838588 17838675 -54315207 + (TTTA)n Simple_repeat Simple_repeat 2 82 0 967 272 80 41 chr20 17838682 17840433 -54313449 - L1MCc LINE L1 -3666 3275 1206 239 191 15 15 chr20 17840434 17840447 -54313435 + (TA)n Simple_repeat Simple_repeat 1 13 -55 189 74 0 0 chr20 17840447 17840474 -54313408 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 191 15 15 chr20 17840474 17840528 -54313354 + (TA)n Simple_repeat Simple_repeat 12 68 0 2032 194 0 3 chr20 17840571 17840957 -54312925 - L1PB4 LINE L1 -2 6154 5770 645 256 105 32 chr20 17840957 17841176 -54312706 - MLT1L LTR MaLR -53 562 328 5242 118 32 23 chr20 17841239 17842068 -54311814 - L1PA16 LINE L1 0 6166 5315 1824 140 54 0 chr20 17842068 17842332 -54311550 + AluSg SINE Alu 1 282 -28 432 0 0 0 chr20 17842332 17842380 -54311502 + (CA)n Simple_repeat Simple_repeat 1 48 0 1824 140 54 0 chr20 17842380 17842394 -54311488 + AluSg SINE Alu 282 294 -16 5242 118 32 23 chr20 17842394 17843067 -54310815 - L1PA16 LINE L1 -851 5315 4650 475 330 89 38 chr20 17843535 17843962 -54309920 - L1MCc LINE L1 -5956 467 19 413 235 28 123 chr20 17844016 17844267 -54309615 - L1MC4a LINE L1 -888 6920 6687 2236 104 0 3 chr20 17844359 17844657 -54309225 + AluSx SINE Alu 3 299 -13 27 0 0 0 chr20 17844923 17844950 -54308932 + AT_rich Low_complexity Low_complexity 1 27 0 28 0 0 0 chr20 17845552 17845580 -54308302 + AT_rich Low_complexity Low_complexity 1 28 0 199 300 0 57 chr20 17846033 17846103 -54307779 + MIR3 SINE MIR 8 73 -135 236 253 145 36 chr20 17846426 17846509 -54307373 - MIR SINE MIR -55 153 62 1762 204 33 82 chr20 17846924 17847434 -54306448 - MLT2B3 LTR ERVL 0 554 70 526 254 182 10 chr20 17849780 17849989 -54303893 - MIR SINE MIR -13 249 5 328 177 16 0 chr20 17850769 17850831 -54303051 + L1MB3 LINE L1 5740 5802 -366 * 816 110 15 7 chr20 17850822 17850958 -54302924 + L1MB3 LINE L1 6026 6162 -21 207 162 0 0 chr20 17851153 17851190 -54302692 + T-rich Low_complexity Low_complexity 1 37 0 381 264 135 7 chr20 17851567 17851715 -54302167 + MLT1I LTR MaLR 242 408 -1 1281 252 114 11 chr20 17851716 17852181 -54301701 - L2 LINE L2 -2190 1124 612 404 286 86 71 chr20 17852194 17852685 -54301197 - L1MEd LINE L1 -4736 1574 1042 807 237 59 5 chr20 17852725 17852911 -54300971 + MER58C DNA MER1_type 1 196 -19 1340 201 22 4 chr20 17853603 17853871 -54300011 - L1M4 LINE L1 -1878 4268 3996 1187 255 50 30 chr20 17853863 17854338 -54299544 - L1MC5 LINE L1 -596 7365 6881 * 6730 68 6 0 chr20 17855576 17855948 -54297934 - L1PA7 LINE L1 -7 6147 5779 2084 119 13 6 chr20 17855948 17856259 -54297623 - AluSq SINE Alu 0 313 1 6730 68 6 0 chr20 17856259 17856982 -54296900 - L1PA7 LINE L1 -375 5779 5063 6976 120 34 4 chr20 17858091 17859899 -54293983 + L1MA2 LINE L1 4440 6304 0 22 0 0 0 chr20 17860341 17860363 -54293519 + AT_rich Low_complexity Low_complexity 1 22 0 416 265 81 81 chr20 17860692 17860877 -54293005 + MIR3 SINE MIR 23 207 -1 740 118 0 55 chr20 17860921 17860936 -54292946 + AluSg/x SINE Alu 179 193 -119 1505 104 0 5 chr20 17860936 17861137 -54292745 + AluSq SINE Alu 21 220 -93 740 118 0 55 chr20 17861137 17861248 -54292634 + AluSg/x SINE Alu 193 298 -14 21 36 0 0 chr20 17861433 17861461 -54292421 + AT_rich Low_complexity Low_complexity 1 28 0 561 130 191 0 chr20 17861867 17861982 -54291900 - L1MCa LINE L1 -4115 2311 2175 2895 129 61 0 chr20 17861982 17862337 -54291545 - L1PB4 LINE L1 -2 6154 5759 252 0 0 0 chr20 17862337 17862365 -54291517 + (TG)n Simple_repeat Simple_repeat 2 29 0 2895 129 61 0 chr20 17862365 17862499 -54291383 - L1PB4 LINE L1 -397 5759 5635 489 92 0 0 chr20 17862499 17862564 -54291318 - HSMAR1 DNA Mariner -4 1283 1219 248 352 62 39 chr20 17864020 17864148 -54289734 - L2 LINE L2 -5 3267 3137 278 244 8 81 chr20 17864212 17864335 -54289547 + L1MEd LINE L1 2 115 -6004 276 357 67 5 chr20 17864346 17864556 -54289326 + L1MEd LINE L1 561 783 -5336 1415 119 0 5 chr20 17864557 17864786 -54289096 - AluSq SINE Alu 0 318 91 2272 111 0 3 chr20 17864792 17865099 -54288783 - AluSx SINE Alu -6 306 1 321 261 160 37 chr20 17865170 17865358 -54288524 + L1ME LINE L1 5550 5760 -402 5493 115 15 19 chr20 17865713 17866588 -54287294 + L1PB2 LINE L1 5279 6149 -2 1688 192 0 10 chr20 17866614 17866921 -54286961 - AluJo SINE Alu -8 304 1 7181 47 10 0 chr20 17867223 17868775 -54285107 - L1PA6 LINE L1 -11 6143 4586 1480 132 4 4 chr20 17868778 17869005 -54284877 - L1P3 LINE L1 -6225 236 10 535 278 117 5 chr20 17869473 17869678 -54284204 + L2 LINE L2 3010 3237 -76 1887 140 0 0 chr20 17870637 17870915 -54282967 + AluSx SINE Alu 35 312 0 2114 141 3 0 chr20 17872665 17872977 -54280905 - AluSq SINE Alu 0 313 1 319 279 101 53 chr20 17873273 17873487 -54280395 + L1MC4 LINE L1 7673 7910 -132 328 39 20 20 chr20 17873487 17873538 -54280344 + (TG)n Simple_repeat Simple_repeat 2 52 0 319 279 101 53 chr20 17873538 17873660 -54280222 + L1MC4 LINE L1 7910 8025 -17 1837 150 14 0 chr20 17873967 17874247 -54279635 - AluSg SINE Alu -26 284 1 3801 186 54 49 chr20 17874505 17875418 -54278464 - L1MD2 LINE L1 0 6359 5443 2313 144 16 55 chr20 17875452 17875507 -54278375 - L1MB2 LINE L1 -7 6164 6108 1674 164 3 54 chr20 17875507 17875824 -54278058 - AluJo SINE Alu -4 308 8 2313 144 16 55 chr20 17875824 17876219 -54277663 - L1MB2 LINE L1 -63 6108 5732 2282 145 10 21 chr20 17876220 17876607 -54277275 - MLT1B LTR MaLR 0 390 8 4288 189 41 15 chr20 17876625 17877997 -54275885 - L1MB2 LINE L1 -451 5732 4329 252 167 0 0 chr20 17878027 17878075 -54275807 - L1MB2 LINE L1 -1776 4370 4323 842 195 0 6 chr20 17878313 17878472 -54275410 - MER3 DNA MER1_type -4 205 48 1230 217 5 0 chr20 17878968 17879189 -54274693 + MER58A DNA MER1_type 3 224 0 4987 260 148 22 chr20 17879248 17881731 -54272151 - L2 LINE L2 -6 3307 510 2069 121 27 3 chr20 17882071 17882368 -54271514 + AluSq SINE Alu 1 304 -9 232 103 0 0 chr20 17883062 17883101 -54270781 + L1PA16 LINE L1 6126 6164 -2 2725 48 0 0 chr20 17883428 17883761 -54270121 - L1PA6 LINE L1 0 6154 5822 188 0 74 0 chr20 17883896 17883923 -54269959 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 7685 106 22 90 chr20 17884029 17885421 -54268461 - HSMAR2 DNA Mariner -1 1301 4 396 322 86 82 chr20 17886356 17887063 -54266819 + L2 LINE L2 2600 3312 -1 372 221 91 0 chr20 17888036 17888113 -54265769 - L2 LINE L2 0 3313 3230 204 200 18 18 chr20 17888142 17888197 -54265685 + (TA)n Simple_repeat Simple_repeat 1 55 0 13158 140 49 32 chr20 17888392 17890746 -54263136 + Tigger1 DNA MER2_type 24 2417 -1 391 326 36 32 chr20 17892383 17892916 -54260966 + L1MC4a LINE L1 4799 5333 -813 262 278 96 70 chr20 17892962 17893149 -54260733 - MLT1J LTR MaLR -55 456 265 299 233 44 37 chr20 17893214 17893358 -54260524 - MLT1L LTR MaLR -355 156 1 1201 281 59 47 chr20 17893358 17893932 -54259950 + L1MC4a LINE L1 5331 5911 -1897 284 321 30 48 chr20 17894493 17894661 -54259221 + L2 LINE L2 2972 3136 -177 23 0 0 0 chr20 17896142 17896165 -54257717 + AT_rich Low_complexity Low_complexity 1 23 0 308 275 127 49 chr20 17896607 17896749 -54257133 - MIR3 SINE MIR -36 172 20 190 279 59 0 chr20 17897683 17897751 -54256131 - MIR SINE MIR -73 189 118 228 35 0 0 chr20 17898038 17898067 -54255815 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1747 119 0 35 chr20 17898071 17898331 -54255551 - AluSg1 SINE Alu -31 278 28 434 83 14 0 chr20 17898385 17898457 -54255425 + (TG)n Simple_repeat Simple_repeat 1 73 0 529 329 14 18 chr20 17898810 17899029 -54254853 + L2 LINE L2 2452 2669 -645 584 263 210 18 chr20 17899125 17899463 -54254419 + L2 LINE L2 2911 3313 0 332 195 103 23 chr20 17899902 17899989 -54253893 + MIR SINE MIR 95 188 -74 2560 244 55 22 chr20 17900070 17900973 -54252909 - HAL1 LINE L1 -386 2121 1147 7451 36 0 0 chr20 17901044 17902636 -54251246 - L1PA4 LINE L1 0 6155 4562 8923 25 0 0 chr20 17902649 17903698 -54250184 - L1P LINE L1 -1453 4693 3645 234 274 66 38 chr20 17903703 17903809 -54250073 - HAL1 LINE L1 -1601 906 798 516 318 101 16 chr20 17903932 17904190 -54249692 - HAL1 LINE L1 -1810 697 418 511 195 13 87 chr20 17904239 17904388 -54249494 - MER58C DNA MER1_type 0 215 78 601 246 60 96 chr20 17904447 17904813 -54249069 - HAL1 LINE L1 -2152 355 3 200 247 153 0 chr20 17906274 17906359 -54247523 + MER91A DNA MER1_type 64 161 -35 1350 220 37 24 chr20 17906444 17906853 -54247029 - L1ME3A LINE L1 -3 6167 5754 21 0 0 0 chr20 17906853 17906874 -54247008 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr20 17907170 17907191 -54246691 + (T)n Simple_repeat Simple_repeat 1 21 0 2400 71 0 6 chr20 17907413 17907735 -54246147 + L1PA7 LINE L1 5834 6153 -1 2426 140 40 35 chr20 17908644 17909066 -54244816 - MSTC LTR MaLR -4 424 1 187 214 24 0 chr20 17909893 17909935 -54243947 - L3 LINE CR1 -1 1576 1534 2381 206 63 11 chr20 17909963 17910483 -54243399 + MLT1F1 LTR MaLR 19 565 -2 363 98 0 0 chr20 17911045 17911106 -54242776 + (CA)n Simple_repeat Simple_repeat 1 61 0 22 0 0 0 chr20 17911218 17911240 -54242642 + AT_rich Low_complexity Low_complexity 1 22 0 309 239 73 58 chr20 17917202 17917407 -54236475 - MER112 DNA MER1_type -1 259 52 622 247 103 8 chr20 17917498 17917741 -54236141 - L1MC4a LINE L1 -1959 5849 5584 2061 225 16 5 chr20 17917741 17918190 -54235692 - MER82 DNA MER2_type 0 653 200 30 45 0 0 chr20 17918444 17918488 -54235394 + AT_rich Low_complexity Low_complexity 1 44 0 2052 58 8 8 chr20 17918497 17918758 -54235124 + AluY SINE Alu 39 299 -12 714 231 17 6 chr20 17918760 17918933 -54234949 - MER82 DNA MER2_type -472 181 7 500 234 94 55 chr20 17918953 17919300 -54234582 - L1MC4a LINE L1 -743 5403 5190 1741 131 139 0 chr20 17919337 17919611 -54234271 + AluSx SINE Alu 1 312 0 186 369 46 23 chr20 17919834 17919964 -54233918 + MIR SINE MIR 2 134 -128 23 68 0 0 chr20 17920485 17920529 -54233353 + AT_rich Low_complexity Low_complexity 1 44 0 3855 202 90 60 chr20 17921272 17922500 -54231382 - L1MC4 LINE L1 0 8042 6779 2208 115 3 0 chr20 17922500 17922796 -54231086 + AluSq SINE Alu 1 297 -16 204 40 0 0 chr20 17922806 17922831 -54231051 + (TG)n Simple_repeat Simple_repeat 1 25 0 1115 144 72 0 chr20 17924479 17924674 -54229208 + MER3 DNA MER1_type 1 209 0 28 29 0 0 chr20 17925602 17925637 -54228245 + AT_rich Low_complexity Low_complexity 1 35 0 2071 237 69 34 chr20 17926218 17926989 -54226893 + L1MC4 LINE L1 7245 8042 0 209 302 19 94 chr20 17927335 17927441 -54226441 - L2 LINE L2 -4 3268 3171 188 270 130 20 chr20 17927646 17927746 -54226136 + MIR SINE MIR 35 145 -63 891 286 21 33 chr20 17928183 17928610 -54225272 + L1MCc LINE L1 20 441 -5982 5883 163 23 8 chr20 17929075 17931018 -54222864 + L1MA4A LINE L1 4295 6296 -7 1291 263 118 31 chr20 17931170 17932407 -54221475 + L1M4 LINE L1 2315 3853 -2293 4698 161 49 5 chr20 17932408 17933632 -54220250 + L1MB7 LINE L1 4905 6175 -9 1200 234 55 30 chr20 17933629 17933746 -54220136 + L1M4 LINE L1 3837 3950 -2196 * 2479 69 7 0 chr20 17933746 17934050 -54219832 + AluY SINE Alu 1 306 -5 1200 234 55 30 chr20 17934050 17934653 -54219229 + L1M4 LINE L1 3950 4771 -1375 2123 95 0 40 chr20 17934856 17935152 -54218730 + AluSc SINE Alu 1 284 -25 22 0 0 0 chr20 17935156 17935178 -54218704 + AT_rich Low_complexity Low_complexity 1 22 0 1724 166 10 24 chr20 17936103 17936393 -54217489 - AluJo SINE Alu -26 286 1 860 209 74 42 chr20 17936488 17936771 -54217111 + L1ME2 LINE L1 5867 6158 -6 1228 168 14 14 chr20 17936810 17937024 -54216858 - AluJo SINE Alu -10 302 89 330 283 115 9 chr20 17937048 17937161 -54216721 + MIR SINE MIR 12 136 -126 193 352 0 0 chr20 17939258 17939312 -54214570 + L2 LINE L2 3217 3270 -2 30 97 0 0 chr20 17939444 17939537 -54214345 + AT_rich Low_complexity Low_complexity 1 93 0 437 268 46 13 chr20 17939539 17939692 -54214190 + Charlie8 DNA MER1_type 132 289 -2128 3835 271 114 7 chr20 17940470 17941909 -54211973 - L2 LINE L2 -6 3307 1699 405 291 17 26 chr20 17941986 17942103 -54211779 - L2 LINE L2 -1155 2159 2044 384 347 24 42 chr20 17942863 17943030 -54210852 - MIR3 SINE MIR -12 196 33 220 352 48 32 chr20 17943175 17943300 -54210582 + MIR3 SINE MIR 15 141 -67 203 246 31 46 chr20 17944146 17944211 -54209671 - MIR3 SINE MIR -7 201 138 2278 97 7 7 chr20 17944713 17945022 -54208860 + AluSc SINE Alu 1 309 0 2428 67 0 7 chr20 17946086 17946383 -54207499 - AluY SINE Alu -16 295 1 1905 85 9 91 chr20 17946383 17946713 -54207169 - AluSx SINE Alu -9 303 1 2519 65 0 3 chr20 17948716 17949026 -54204856 - AluY SINE Alu -2 309 1 444 330 0 0 chr20 17949962 17950080 -54203802 + L2 LINE L2 3149 3266 -6 185 224 17 0 chr20 17950543 17950601 -54203281 + (TG)n Simple_repeat Simple_repeat 2 60 0 3865 141 31 14 chr20 17952902 17953223 -54200659 + L1PA15 LINE L1 5509 5823 -342 2290 92 23 7 chr20 17953223 17953527 -54200355 + AluSq SINE Alu 1 309 -4 3865 141 31 14 chr20 17953527 17953851 -54200031 + L1PA15 LINE L1 5823 6165 0 229 244 0 0 chr20 17954108 17954153 -54199729 + GA-rich Low_complexity Low_complexity 2 46 0 29 28 0 0 chr20 17954285 17954321 -54199561 + AT_rich Low_complexity Low_complexity 1 36 0 954 279 100 8 chr20 17954772 17955123 -54198759 + LTR16C LTR ERVL 109 491 0 365 234 43 0 chr20 17956717 17956811 -54197071 + L2 LINE L2 2365 2462 -852 522 256 80 35 chr20 17956811 17957279 -54196603 - MLT1H LTR MaLR 0 595 20 1086 240 149 24 chr20 17957285 17957849 -54196033 + L2 LINE L2 2459 3123 -190 368 297 66 0 chr20 17957864 17958046 -54195836 + L1M4 LINE L1 4834 5027 -1119 1916 161 3 0 chr20 17958061 17958347 -54195535 - AluJb SINE Alu -25 287 1 1834 232 129 48 chr20 17958378 17959175 -54194707 + L1M4b LINE L1 6 962 -5897 30603 107 10 55 chr20 17959184 17965638 -54188244 + L1PA7 LINE L1 12 6164 0 2235 223 61 53 chr20 17965645 17966064 -54187818 + L1M4b LINE L1 957 1371 -5767 2453 67 0 3 chr20 17966064 17966362 -54187520 + AluY SINE Alu 1 297 -14 2235 223 61 53 chr20 17966362 17967526 -54186356 + L1M4b LINE L1 1371 2687 -4451 655 269 56 69 chr20 17967557 17968092 -54185790 + L1MEc LINE L1 1735 2262 -4134 261 197 0 0 chr20 17968125 17968186 -54185696 + (TA)n Simple_repeat Simple_repeat 1 61 0 705 246 93 55 chr20 17968205 17968599 -54185283 - MLT2D LTR ERVL -34 486 27 4815 250 26 4 chr20 17968605 17969941 -54183941 + L1MEc LINE L1 2252 3617 -2598 1177 136 11 16 chr20 17969942 17970126 -54183756 - MLT1B LTR MaLR -207 183 1 1047 205 51 0 chr20 17970420 17970674 -54183208 - L1MDb LINE L1 -5192 1351 1085 * 1114 213 33 0 chr20 17970673 17970884 -54182998 - L1MDb LINE L1 -6314 226 9 2172 136 0 0 chr20 17971253 17971548 -54182334 - AluSx SINE Alu -17 295 1 309 167 143 36 chr20 17972149 17972233 -54181649 + LTR16C LTR ERVL 150 242 -249 228 272 86 0 chr20 17972336 17972417 -54181465 + L2 LINE L2 3225 3312 -1 192 111 0 0 chr20 17973808 17973844 -54180038 + (TG)n Simple_repeat Simple_repeat 2 37 0 1703 306 121 25 chr20 17974288 17975480 -54178402 + L2 LINE L2 2004 3312 -1 2525 233 88 46 chr20 17976837 17977624 -54176258 - MER21B LTR ERV1 -1 862 43 278 257 43 14 chr20 17977626 17977696 -54176186 - MER21B LTR ERV1 -773 90 19 241 256 47 23 chr20 17977694 17977780 -54176102 - MER21B LTR ERV1 -757 106 19 * 315 243 81 0 chr20 17977797 17977871 -54176011 - MER21B LTR ERV1 -758 105 26 270 0 0 0 chr20 17977873 17977903 -54175979 + (TA)n Simple_repeat Simple_repeat 2 31 0 457 188 197 8 chr20 17977919 17978022 -54175860 - L1ME1 LINE L1 -151 6015 5886 3714 58 0 7 chr20 17978022 17978473 -54175409 - LTR7 LTR ERV1 -2 448 1 457 188 197 8 chr20 17978473 17978486 -54175396 - L1ME1 LINE L1 -280 5886 5877 2378 87 46 14 chr20 17978486 17978853 -54175029 - HERVH LTR ERV1 -13 7700 7322 1374 132 18 14 chr20 17978851 17979070 -54174812 - HERVH LTR ERV1 -1894 5819 5600 * 4197 137 20 3 chr20 17979071 17979722 -54174160 - HERVH LTR ERV1 -2564 5149 4488 3312 119 6 6 chr20 17979724 17980226 -54173656 - HERVH LTR ERV1 -3720 3993 3492 949 140 7 0 chr20 17980216 17980366 -54173516 - HERVH LTR ERV1 -4423 3290 3140 * 8452 88 15 16 chr20 17980345 17981569 -54172313 - HERVH LTR ERV1 -4718 2995 1773 2910 132 46 61 chr20 17981564 17982379 -54171503 - HERVH LTR ERV1 -6946 767 1 * 3669 58 0 7 chr20 17982381 17982832 -54171050 - LTR7 LTR ERV1 -2 448 1 1060 216 94 25 chr20 17982843 17983162 -54170720 - L1ME1 LINE L1 -273 5891 5551 212 259 266 19 chr20 17983544 17983702 -54170180 + L2 LINE L2 3117 3313 0 858 279 43 8 chr20 17983793 17984051 -54169831 - MER110 LTR ERV1 0 491 225 283 185 173 49 chr20 17984167 17984248 -54169634 - MER110A LTR ERV1 -298 170 80 2103 284 138 26 chr20 17985531 17986932 -54166950 - HAL1 LINE L1 -171 2336 780 232 241 80 18 chr20 17987285 17987397 -54166485 - MER113 DNA MER1_type? -385 136 18 1726 159 10 45 chr20 17987445 17987754 -54166128 - AluJo SINE Alu -11 301 4 2068 124 7 0 chr20 17988246 17988544 -54165338 - AluSx SINE Alu -12 300 1 1045 195 24 10 chr20 17988682 17988887 -54164995 - MER3 DNA MER1_type -1 208 1 2739 234 92 13 chr20 17988931 17989695 -54164187 - L1ME1 LINE L1 -18 6148 5325 27 61 0 15 chr20 17989705 17989745 -54164137 + AT_rich Low_complexity Low_complexity 1 41 -24 1502 158 4 49 chr20 17989745 17990011 -54163871 + AluJo SINE Alu 35 288 -24 27 61 0 15 chr20 17990011 17990036 -54163846 + AT_rich Low_complexity Low_complexity 41 65 0 482 194 111 7 chr20 17990051 17990195 -54163687 - L1ME1 LINE L1 -840 5306 5148 1523 247 49 33 chr20 17990195 17990555 -54163327 - L1ME1 LINE L1 -1380 4766 4392 1625 185 63 0 chr20 17990555 17990841 -54163041 - AluJb SINE Alu -6 306 3 1523 247 49 33 chr20 17990841 17991054 -54162828 - L1ME1 LINE L1 -1754 4392 4184 701 184 159 75 chr20 17992528 17992729 -54161153 - MER20 DNA MER1_type -1 218 1 2304 93 0 10 chr20 17992854 17993155 -54160727 - AluSx SINE Alu -14 298 1 231 36 0 0 chr20 17994767 17994795 -54159087 + (T)n Simple_repeat Simple_repeat 1 28 0 186 43 0 0 chr20 17996411 17996434 -54157448 + (TG)n Simple_repeat Simple_repeat 1 23 0 230 28 0 56 chr20 17997113 17997149 -54156733 + (CGGGGG)n Simple_repeat Simple_repeat 2 35 0 1360 193 141 75 chr20 17998554 17999036 -54154846 + MLT1H LTR MaLR 9 522 -27 489 281 98 15 chr20 17999158 17999361 -54154521 - MIR SINE MIR -31 231 12 257 305 219 0 chr20 17999721 17999826 -54154056 + MIR SINE MIR 20 147 -115 973 152 15 20 chr20 17999991 18000188 -54153694 + L1MA4 LINE L1 6105 6300 0 438 274 161 66 chr20 18000281 18000660 -54153222 - MLT1L LTR MaLR -1 614 96 225 211 0 0 chr20 18001745 18001802 -54152080 + (TG)n Simple_repeat Simple_repeat 2 58 0 4289 113 57 0 chr20 18002159 18002759 -54151123 + MER41B LTR ERV1 1 634 -1 189 364 105 25 chr20 18003409 18003571 -54150311 - L3b LINE CR1 -3 1580 1406 782 251 146 14 chr20 18003994 18004213 -54149669 - MER45C DNA AcHobo 0 953 706 1092 196 60 16 chr20 18004290 18004540 -54149342 - MER45C DNA AcHobo -692 261 1 1084 238 106 36 chr20 18004579 18005134 -54148748 - HAL1 LINE L1 -991 1516 923 718 315 151 28 chr20 18005209 18005341 -54148541 - HAL1 LINE L1 -1703 804 690 390 21 0 0 chr20 18005341 18005388 -54148494 + (TG)n Simple_repeat Simple_repeat 1 47 0 718 315 151 28 chr20 18005388 18005970 -54147912 - HAL1 LINE L1 -1817 690 2 4839 185 89 16 chr20 18007527 18008491 -54145391 + MER45B DNA AcHobo 4 1038 -2 234 308 0 0 chr20 18008858 18008910 -54144972 - L2 LINE L2 -73 3199 3148 252 49 24 73 chr20 18008986 18009027 -54144855 - MLT1K LTR MaLR 0 588 550 4448 232 75 32 chr20 18009509 18010458 -54143424 + L1ME1 LINE L1 2944 3850 -2296 2034 138 7 7 chr20 18010458 18010754 -54143128 + AluSx SINE Alu 1 296 -16 4448 232 75 32 chr20 18010754 18011175 -54142707 + L1ME1 LINE L1 3850 4385 -1761 2145 156 42 39 chr20 18011175 18011560 -54142322 - MLT1B LTR MaLR 0 390 5 4448 232 75 32 chr20 18011560 18011665 -54142217 + L1ME1 LINE L1 4385 4484 -1662 27 62 0 0 chr20 18011685 18011733 -54142149 + AT_rich Low_complexity Low_complexity 1 48 0 10104 123 9 3 chr20 18011737 18014001 -54139881 - L1PA11 LINE L1 -5 6169 3889 2749 211 21 74 chr20 18014001 18014756 -54139126 + L1ME1 LINE L1 5302 6016 -150 386 308 0 0 chr20 18015812 18015903 -54137979 + MIR3 SINE MIR 93 183 -25 790 226 25 95 chr20 18018634 18018877 -54135005 - MIR SINE MIR -14 248 23 339 238 0 82 chr20 18019023 18019145 -54134737 - L2 LINE L2 -2 3311 3200 1163 251 132 54 chr20 18019456 18019499 -54134383 + MLT1J LTR MaLR 70 108 -403 1950 151 0 10 chr20 18019499 18019798 -54134084 - AluSx SINE Alu -16 296 1 1163 251 132 54 chr20 18019798 18020164 -54133718 + MLT1J LTR MaLR 108 511 0 240 250 14 0 chr20 18020214 18020286 -54133596 + LTR67 LTR ERVL 466 538 -19 8192 205 52 31 chr20 18021515 18022551 -54131331 - L1MC1 LINE L1 -5 6608 5595 243 0 0 0 chr20 18022551 18022578 -54131304 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 8192 205 52 31 chr20 18022578 18027060 -54126822 - L1MC1 LINE L1 -1018 5595 739 2452 137 25 18 chr20 18027060 18027453 -54126429 - MER57A LTR ERV1 0 403 8 231 283 17 0 chr20 18027473 18027533 -54126349 - L1MC1 LINE L1 -6347 79 19 230 243 174 23 chr20 18027824 18027971 -54125911 + MIR SINE MIR 6 166 -42 7876 167 28 16 chr20 18028647 18029428 -54124454 - L1MA7 LINE L1 -1 6290 5520 628 12 25 0 chr20 18029428 18029509 -54124373 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 2427 83 0 0 chr20 18029514 18029804 -54124078 - AluSq SINE Alu -23 290 1 7876 167 28 16 chr20 18029804 18031416 -54122466 - L1MA7 LINE L1 -774 5517 3866 1991 174 6 14 chr20 18031634 18031991 -54121891 - MLT1A1 LTR MaLR 0 365 12 285 286 9 9 chr20 18032072 18032177 -54121705 - L1MC/D LINE L1 -354 5810 5711 1612 256 60 17 chr20 18032666 18033146 -54120736 + L1ME3A LINE L1 5521 6021 -149 504 187 157 8 chr20 18033166 18033300 -54120582 - L1ME1 LINE L1 -2 6164 6011 567 164 0 82 chr20 18033300 18033434 -54120448 + L1ME3A LINE L1 6043 6165 -5 228 122 0 0 chr20 18034110 18034151 -54119731 + (T)n Simple_repeat Simple_repeat 1 41 0 191 36 36 0 chr20 18034192 18034220 -54119662 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 388 249 179 0 chr20 18035345 18035518 -54118364 + MER5C DNA MER1_type 1 204 -120 21 71 0 0 chr20 18035659 18035701 -54118181 + AT_rich Low_complexity Low_complexity 1 42 0 1351 262 23 67 chr20 18035736 18036217 -54117665 - LTR16C LTR ERVL 0 491 32 818 258 128 34 chr20 18036429 18036836 -54117046 + MLT1J2 LTR MaLR 3 447 -3 327 252 271 0 chr20 18036868 18037019 -54116863 + L2 LINE L2 3122 3313 0 186 316 0 0 chr20 18037029 18037086 -54116796 - MIR SINE MIR -160 102 46 396 252 37 30 chr20 18037511 18037646 -54116236 + MIR SINE MIR 18 153 -109 362 302 13 13 chr20 18038926 18039075 -54114807 - L3 LINE CR1 -106 1471 1323 2077 135 7 0 chr20 18039229 18039517 -54114365 + AluSx SINE Alu 3 292 -20 2213 97 0 55 chr20 18042300 18042630 -54111252 + AluSx SINE Alu 1 312 0 778 294 40 43 chr20 18042839 18043165 -54110717 + MER102b DNA MER1_type 5 329 -12 960 206 79 9 chr20 18043203 18043430 -54110452 - LTR16C LTR ERVL 0 491 249 2540 161 77 82 chr20 18043430 18043700 -54110182 + MER92B LTR ERV1 2 272 -364 2031 133 0 0 chr20 18043700 18043978 -54109904 - AluSg SINE Alu -32 278 1 2540 161 77 82 chr20 18043978 18044340 -54109542 + MER92B LTR ERV1 272 631 -5 339 289 147 15 chr20 18044344 18044548 -54109334 - LTR16C LTR ERVL -250 241 11 526 243 88 92 chr20 18044767 18045146 -54108736 + LTR16B LTR ERVL 1 449 -15 538 255 26 13 chr20 18045771 18045924 -54107958 + MIR SINE MIR 38 192 -70 457 224 9 9 chr20 18046029 18046136 -54107746 + LTR33 LTR ERVL 415 521 0 365 251 112 58 chr20 18046451 18046674 -54107208 + Charlie8 DNA MER1_type 29 265 -2152 2443 100 0 0 chr20 18046712 18047022 -54106860 - AluSq SINE Alu -1 312 3 2434 60 0 38 chr20 18047487 18047801 -54106081 - AluY SINE Alu -9 302 1 469 279 94 10 chr20 18048671 18048872 -54105010 + MIR SINE MIR 2 219 -43 774 284 37 8 chr20 18049753 18049996 -54103886 + MIR SINE MIR 12 261 -1 2453 60 0 29 chr20 18050002 18050347 -54103535 - AluY SINE Alu 0 337 2 369 284 21 0 chr20 18050934 18051029 -54102853 - MER58C DNA MER1_type 0 215 119 279 79 0 0 chr20 18051029 18051067 -54102815 + (TCC)n Simple_repeat Simple_repeat 1 38 0 282 241 241 19 chr20 18051084 18051192 -54102690 - MER58C DNA MER1_type -83 132 1 2279 92 0 10 chr20 18051642 18051934 -54101948 + AluSg SINE Alu 13 301 -9 837 210 101 33 chr20 18052585 18052925 -54100957 + MLT1H1 LTR MaLR 191 555 0 502 292 34 61 chr20 18052968 18053232 -54100650 - L2 LINE L2 -3 3310 3054 2415 114 25 11 chr20 18053239 18053598 -54100284 + THE1B LTR MaLR 1 364 0 341 238 171 54 chr20 18055046 18055392 -54098490 + MLT1H LTR MaLR 119 516 -33 1799 179 0 28 chr20 18055392 18055711 -54098171 - AluJo SINE Alu -2 310 1 341 238 171 54 chr20 18055711 18055750 -54098132 + MLT1H LTR MaLR 516 549 0 552 218 39 19 chr20 18056579 18056735 -54097147 - MIR SINE MIR -69 193 35 911 137 0 26 chr20 18057536 18057689 -54096193 + FRAM SINE Alu 26 174 -2 186 281 18 0 chr20 18057919 18057976 -54095906 + MER5A DNA MER1_type 132 189 0 238 208 0 19 chr20 18058306 18058359 -54095523 - MER5A DNA MER1_type -2 187 136 769 246 0 11 chr20 18058433 18058612 -54095270 - MER5B DNA MER1_type 0 178 2 692 156 97 13 chr20 18058634 18058788 -54095094 - MER5A DNA MER1_type -22 167 1 679 251 154 9 chr20 18059079 18059306 -54094576 + MIR SINE MIR 2 261 -1 233 232 138 80 chr20 18059458 18059596 -54094286 + L2 LINE L2 3125 3270 -2 1233 263 92 11 chr20 18059865 18060245 -54093637 + MLT1J2 LTR MaLR 6 416 -34 354 214 120 60 chr20 18061335 18061452 -54092430 - MLT1H1 LTR MaLR -37 518 395 250 241 81 11 chr20 18061507 18061594 -54092288 - MIR SINE MIR 0 262 170 759 249 179 56 chr20 18061608 18062054 -54091828 + MLT1H1 LTR MaLR 27 527 -28 408 252 110 8 chr20 18062064 18062191 -54091691 - MIR SINE MIR -122 140 1 181 295 95 9 chr20 18064798 18064903 -54088979 - MIR SINE MIR -63 145 32 415 227 0 170 chr20 18064977 18065224 -54088658 - MIR SINE MIR -24 238 34 31 0 0 0 chr20 18066019 18066050 -54087832 + GC_rich Low_complexity Low_complexity 1 31 0 1640 203 0 4 chr20 18067240 18067521 -54086361 + AluJo SINE Alu 1 280 -32 351 0 0 0 chr20 18067521 18067560 -54086322 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1679 191 0 14 chr20 18068697 18068990 -54084892 + AluJb SINE Alu 1 289 -23 244 336 12 52 chr20 18069133 18069307 -54084575 + MIR SINE MIR 24 189 -73 238 167 42 0 chr20 18069686 18069734 -54084148 + T-rich Low_complexity Low_complexity 1 50 0 545 262 28 0 chr20 18069735 18069876 -54084006 + MER104 DNA Tc2 32 176 -4 509 192 8 0 chr20 18070742 18070867 -54083015 + (TCCA)n Simple_repeat Simple_repeat 1 126 0 642 311 85 35 chr20 18070876 18071301 -54082581 - L2 LINE L2 -40 3273 2828 994 163 7 0 chr20 18071856 18072009 -54081873 - FRAM SINE Alu -23 153 1 392 179 0 12 chr20 18072371 18072455 -54081427 + GA-rich Low_complexity Low_complexity 80 162 0 840 121 11 22 chr20 18072468 18072650 -54081232 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 535 303 73 51 chr20 18074515 18074927 -54078955 + MLT1J LTR MaLR 1 421 -90 424 38 0 0 chr20 18075036 18075089 -54078793 - MADE1 DNA Mariner -27 53 1 650 281 25 10 chr20 18075113 18075316 -54078566 + L1MC4 LINE L1 6797 7002 -1040 226 344 10 0 chr20 18079124 18079220 -54074662 + MIR SINE MIR 17 113 -95 2278 98 0 35 chr20 18079314 18079631 -54074251 - AluSq SINE Alu -7 306 1 281 301 58 0 chr20 18079694 18079797 -54074085 + MLT1H LTR MaLR 197 305 -244 347 281 10 0 chr20 18079904 18080000 -54073882 + MLT1H LTR MaLR 453 549 0 251 227 91 15 chr20 18080775 18080841 -54073041 - L2 LINE L2 -4 3268 3198 1103 212 71 67 chr20 18080857 18081323 -54072559 + LTR37B LTR ERV1 1 468 0 2565 69 7 0 chr20 18081458 18081763 -54072119 - AluSx SINE Alu -5 307 1 584 240 36 53 chr20 18082238 18082463 -54071419 - LTR33 LTR ERVL 0 521 301 652 255 14 0 chr20 18082489 18082634 -54071248 - LTR33 LTR ERVL -361 160 14 243 265 112 0 chr20 18082684 18082782 -54071100 - MIR SINE MIR -43 219 111 1682 119 0 9 chr20 18083304 18083531 -54070351 - AluSq SINE Alu -88 225 1 190 180 100 20 chr20 18083635 18083685 -54070197 + MIR SINE MIR 91 144 -118 236 167 0 36 chr20 18083940 18083995 -54069887 - MIR SINE MIR -99 163 113 2334 118 0 0 chr20 18084345 18084650 -54069232 - AluSx SINE Alu -7 305 1 280 274 27 0 chr20 18084970 18085043 -54068839 + MER91A DNA MER1_type 8 82 -114 237 329 77 19 chr20 18085142 18085297 -54068585 + L2 LINE L2 2945 3108 -164 719 299 34 24 chr20 18085520 18085848 -54068034 + L2 LINE L2 2982 3312 -1 214 269 0 23 chr20 18086406 18086506 -54067376 + (TA)n Simple_repeat Simple_repeat 2 99 -73 1954 107 13 63 chr20 18086506 18086828 -54067054 - AluSx SINE Alu 0 307 1 214 269 0 23 chr20 18086828 18086901 -54066981 + (TA)n Simple_repeat Simple_repeat 99 172 0 696 236 34 0 chr20 18087035 18087213 -54066669 + MER5A DNA MER1_type 6 189 0 2247 101 0 17 chr20 18087997 18088295 -54065587 - AluSx SINE Alu -19 293 1 373 311 74 16 chr20 18089986 18090108 -54063774 - L2 LINE L2 0 3272 3144 429 223 16 33 chr20 18090121 18090242 -54063640 + MER5B DNA MER1_type 54 172 -6 558 29 0 0 chr20 18090925 18090993 -54062889 + (CAAAA)n Simple_repeat Simple_repeat 3 70 0 378 0 0 0 chr20 18093204 18093246 -54060636 + (CA)n Simple_repeat Simple_repeat 2 43 0 2207 99 17 3 chr20 18093515 18093809 -54060073 - AluSq SINE Alu -14 299 2 231 292 112 11 chr20 18094065 18094154 -54059728 + MIR SINE MIR 47 144 -64 2255 99 3 20 chr20 18094476 18094778 -54059104 - AluSx SINE Alu -15 297 1 210 111 89 0 chr20 18095036 18095081 -54058801 + (AAATG)n Simple_repeat Simple_repeat 4 52 0 920 245 71 41 chr20 18095191 18095485 -54058397 + MLT1E LTR MaLR 1 303 -290 726 196 0 77 chr20 18095478 18095646 -54058236 + MLT1E LTR MaLR 439 593 0 * 272 88 0 0 chr20 18097404 18097438 -54056444 + MLT1I LTR MaLR 127 160 -249 359 136 51 0 chr20 18097450 18097509 -54056373 + MLT1J1 LTR MaLR 265 326 -120 340 274 21 0 chr20 18097510 18097605 -54056277 - MIR SINE MIR -78 130 34 827 230 94 5 chr20 18097661 18097874 -54056008 + MIR SINE MIR 10 241 -21 1665 317 143 25 chr20 18098446 18099785 -54054097 + L2 LINE L2 586 2082 -1232 188 222 0 0 chr20 18099811 18099856 -54054026 + L2 LINE L2 2304 2348 -966 517 326 180 16 chr20 18099891 18100621 -54053261 + L2 LINE L2 2448 3313 0 1978 218 89 4 chr20 18103049 18103554 -54050328 - L1ME3A LINE L1 -13 6157 5610 599 52 39 0 chr20 18103555 18103632 -54050250 + THE1A LTR MaLR 1 80 -275 5278 74 5 0 chr20 18103637 18104297 -54049585 + THE1A-int LTR MaLR 918 1580 0 904 112 8 0 chr20 18104297 18104422 -54049460 + THE1A LTR MaLR 1 126 -229 2229 110 0 3 chr20 18104544 18104836 -54049046 + AluSc SINE Alu 4 294 -15 279 311 95 20 chr20 18105263 18105411 -54048471 - MIR SINE MIR -79 183 25 233 180 10 56 chr20 18105412 18105487 -54048395 + MLT1I LTR MaLR 104 149 -260 233 274 0 0 chr20 18105786 18105848 -54048034 - MER5A DNA MER1_type 0 189 128 5590 128 21 9 chr20 18105851 18106790 -54047092 + L1PB4 LINE L1 5215 6152 -4 358 270 20 10 chr20 18106804 18106904 -54046978 - MER5A DNA MER1_type -80 109 9 2385 93 3 0 chr20 18107149 18107449 -54046433 - AluSp SINE Alu -11 302 2 1688 225 101 17 chr20 18108064 18108613 -54045269 + L1ME1 LINE L1 5582 6334 0 767 234 64 0 chr20 18109638 18109826 -54044056 - LTR16C LTR ERVL -3 488 289 237 65 0 0 chr20 18109988 18110019 -54043863 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 362 341 41 52 chr20 18110264 18110631 -54043251 + L3b LINE CR1 1114 1476 -107 1998 241 33 10 chr20 18111076 18111595 -54042287 + L1ME2 LINE L1 5634 6164 0 333 217 9 19 chr20 18111608 18111714 -54042168 + GA-rich Low_complexity Low_complexity 4 108 0 513 313 102 31 chr20 18111982 18112461 -54041421 + HAL1 LINE L1 1214 1726 -781 2318 99 0 26 chr20 18112491 18112804 -54041078 + AluSx SINE Alu 1 305 -7 2520 63 0 0 chr20 18112956 18113257 -54040625 + AluY SINE Alu 1 301 -10 2314 97 0 0 chr20 18113261 18113550 -54040332 + AluY SINE Alu 1 289 -22 330 279 50 19 chr20 18113569 18113730 -54040152 + L1M4 LINE L1 2247 2412 -3734 1433 240 88 49 chr20 18113813 18114325 -54039557 + MLT1H LTR MaLR 18 549 0 229 151 38 0 chr20 18115286 18115339 -54038543 + (TA)n Simple_repeat Simple_repeat 1 55 0 720 196 65 54 chr20 18115499 18115611 -54038271 + MIR SINE MIR 77 193 -69 2603 47 0 25 chr20 18115611 18115930 -54037952 + AluY SINE Alu 1 311 0 720 196 65 54 chr20 18115930 18116001 -54037881 + MIR SINE MIR 193 262 0 581 207 58 29 chr20 18117263 18117437 -54036445 + MIR SINE MIR 82 260 -2 2200 73 22 0 chr20 18117543 18117881 -54036001 - AluSx SINE Alu 0 346 3 204 67 0 0 chr20 18118937 18118967 -54034915 + (CAG)n Simple_repeat Simple_repeat 2 31 0 29 0 0 0 chr20 18119012 18119041 -54034841 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr20 18119120 18119172 -54034710 + GC_rich Low_complexity Low_complexity 1 52 0 234 62 0 0 chr20 18119179 18119211 -54034671 + (CCG)n Simple_repeat Simple_repeat 3 34 0 591 40 0 0 chr20 18119477 18119551 -54034331 + (GGA)n Simple_repeat Simple_repeat 1 74 0 181 216 27 0 chr20 18122233 18122270 -54031612 + L2 LINE L2 3123 3160 -112 1996 134 6 34 chr20 18122475 18122796 -54031086 - AluSx SINE Alu 0 312 1 599 213 63 45 chr20 18123401 18123622 -54030260 - L1MC5 LINE L1 -36 7925 7701 738 246 175 46 chr20 18123736 18124130 -54029752 + MLT1J2 LTR MaLR 1 445 -5 801 244 52 5 chr20 18124152 18124365 -54029517 - MER58A DNA MER1_type -1 223 1 237 156 78 111 chr20 18124445 18124535 -54029347 + MIR SINE MIR 101 187 -75 294 224 282 0 chr20 18124609 18124694 -54029188 + L2 LINE L2 3204 3312 -1 495 253 73 27 chr20 18125479 18125629 -54028253 - MIR3 SINE MIR -29 179 23 526 190 203 0 chr20 18125723 18125881 -54028001 - L1ME3A LINE L1 -105 6065 5876 396 254 282 6 chr20 18125965 18126146 -54027736 + MLT1H LTR MaLR 1 231 -318 348 77 0 0 chr20 18126148 18126200 -54027682 + (TC)n Simple_repeat Simple_repeat 1 52 0 396 0 0 0 chr20 18126200 18126244 -54027638 + (TG)n Simple_repeat Simple_repeat 1 44 0 476 258 202 49 chr20 18126248 18126515 -54027367 + MLT1H LTR MaLR 224 531 -18 1168 242 31 50 chr20 18126534 18127010 -54026872 - L1MC4 LINE L1 -184 7858 7392 373 245 0 59 chr20 18128320 18128422 -54025460 - MLT1J2 LTR MaLR 0 450 355 377 250 0 19 chr20 18128576 18128680 -54025202 - MLT1J2 LTR MaLR -317 133 32 286 284 0 20 chr20 18128788 18128890 -54024992 - MER58 DNA MER1_type -3 2417 2318 379 203 0 0 chr20 18128903 18128977 -54024905 - MER58 DNA MER1_type -243 98 25 29 47 0 0 chr20 18129967 18130010 -54023872 + AT_rich Low_complexity Low_complexity 1 43 0 288 0 0 0 chr20 18130115 18130147 -54023735 + (CA)n Simple_repeat Simple_repeat 2 33 0 281 212 71 20 chr20 18130261 18130360 -54023522 - L1ME3A LINE L1 -275 5846 5743 1581 236 49 25 chr20 18130414 18130901 -54022981 + L1ME3 LINE L1 5657 6155 -7 225 209 38 48 chr20 18131462 18131567 -54022315 - MLT1J2 LTR MaLR -22 428 325 1436 255 134 16 chr20 18131816 18132307 -54021575 - MLT1H LTR MaLR 0 549 1 1623 163 140 93 chr20 18132905 18133397 -54020485 + MLT2B2 LTR ERVL 1 515 0 345 274 160 50 chr20 18133397 18133616 -54020266 + MLT1H LTR MaLR 133 375 -174 549 292 95 43 chr20 18133897 18134243 -54019639 + MLT1J2 LTR MaLR 23 386 -64 23 33 0 0 chr20 18134243 18134273 -54019609 + AT_rich Low_complexity Low_complexity 1 30 0 282 190 38 13 chr20 18134273 18134352 -54019530 + MLT1J2 LTR MaLR 368 448 -2 470 278 112 14 chr20 18134703 18134980 -54018902 + LTR16C LTR ERVL 88 391 -100 1334 220 8 47 chr20 18135014 18135373 -54018509 + MLT1A1 LTR MaLR 21 365 0 392 302 133 19 chr20 18135380 18135693 -54018189 - L2 LINE L2 -261 3052 2697 1100 98 0 0 chr20 18136068 18136211 -54017671 + AluSg/x SINE Alu 143 285 -25 222 91 0 0 chr20 18136211 18136244 -54017638 + (TA)n Simple_repeat Simple_repeat 1 33 0 21 57 0 0 chr20 18137167 18137202 -54016680 + AT_rich Low_complexity Low_complexity 1 35 0 498 234 85 7 chr20 18137462 18137603 -54016279 + MIR SINE MIR 108 259 -3 198 295 0 49 chr20 18137604 18137665 -54016217 + L2 LINE L2 3205 3262 -10 2173 155 0 54 chr20 18137766 18138192 -54015690 + MER57A LTR ERV1 1 403 0 1481 221 62 26 chr20 18138225 18138645 -54015237 - MER63B DNA MER1_type -1 435 1 2302 84 0 3 chr20 18138712 18139009 -54014873 + AluSg SINE Alu 2 297 -13 502 319 50 21 chr20 18139338 18139617 -54014265 + L2 LINE L2 2456 2742 -572 228 354 59 29 chr20 18139713 18139922 -54013960 + MIR SINE MIR 31 261 -1 270 160 0 0 chr20 18140064 18140114 -54013768 + T-rich Low_complexity Low_complexity 2 51 0 202 260 55 41 chr20 18141244 18141317 -54012565 + L2 LINE L2 3170 3243 -70 237 145 48 0 chr20 18141353 18141415 -54012467 + GA-rich Low_complexity Low_complexity 1 65 0 1717 187 11 0 chr20 18141561 18142003 -54011879 + AluJo SINE Alu 1 445 0 451 86 14 0 chr20 18142143 18142213 -54011669 + L1MB1 LINE L1 6082 6152 -37 1459 194 19 16 chr20 18142213 18142528 -54011354 + MLT1A1 LTR MaLR 1 316 -49 686 213 72 0 chr20 18143979 18144186 -54009696 - Charlie5 DNA MER1_type -54 2558 2337 260 237 0 0 chr20 18144181 18144240 -54009642 - Charlie5 DNA MER1_type -2553 59 1 * 312 250 107 0 chr20 18144263 18144347 -54009535 - L2 LINE L2 -299 3014 2922 1030 292 58 7 chr20 18145036 18145468 -54008414 - LTR16C LTR ERVL 0 491 38 344 62 0 0 chr20 18145580 18145628 -54008254 - MADE1 DNA Mariner 0 80 33 438 20 0 0 chr20 18146169 18146220 -54007662 + (CA)n Simple_repeat Simple_repeat 2 52 0 653 288 26 76 chr20 18146792 18147215 -54006667 + MLT1J LTR MaLR 110 511 0 1226 206 69 33 chr20 18147442 18147864 -54006018 - L1MCb LINE L1 -3947 2617 2181 1051 176 33 107 chr20 18147910 18148182 -54005700 + AluJo SINE Alu 1 252 -60 209 108 0 27 chr20 18148188 18148225 -54005657 + (TG)n Simple_repeat Simple_repeat 1 36 0 1379 194 32 25 chr20 18148225 18148509 -54005373 - AluJo SINE Alu -26 286 1 688 195 63 20 chr20 18148512 18148721 -54005161 - L1MCb LINE L1 -4541 2023 1830 711 148 20 10 chr20 18148723 18148857 -54005025 - MSTD LTR MaLR -8 388 249 6444 158 15 20 chr20 18148876 18150471 -54003411 - L1MA5 LINE L1 -6 6294 4693 5366 129 11 5 chr20 18150471 18151574 -54002308 - L1PA16 LINE L1 -15 6151 5026 2789 128 14 0 chr20 18151574 18152002 -54001880 - MER57B LTR ERV1 0 434 1 6444 158 15 20 chr20 18152002 18152672 -54001210 - L1MA5 LINE L1 -1605 4695 4029 262 214 76 116 chr20 18152674 18152890 -54000992 - MSTD LTR MaLR -162 212 1 2858 216 62 58 chr20 18152890 18153006 -54000876 - L1MCb LINE L1 -4847 1717 1603 2274 86 48 0 chr20 18153006 18153296 -54000586 - AluSc SINE Alu -5 304 1 2858 216 62 58 chr20 18153296 18154921 -53998961 - L1MCb LINE L1 -4961 1603 3 248 237 34 0 chr20 18256247 18256306 -53897576 - MER94 DNA DNA 0 134 74 265 257 0 60 chr20 18257094 18257406 -53896476 + (CATA)n Simple_repeat Simple_repeat 1 293 0 312 354 55 30 chr20 18258169 18258333 -53895549 + L2 LINE L2 3100 3267 -5 7690 47 6 6 chr20 18258616 18259693 -53894189 - L1PA5 LINE L1 -3 6151 5073 1517 95 27 27 chr20 18259948 18260170 -53893712 + MER30 DNA MER1_type 2 223 -7 643 160 101 17 chr20 18260233 18260352 -53893530 - FLAM_C SINE Alu -13 130 2 28 0 0 0 chr20 18260504 18260532 -53893350 + AT_rich Low_complexity Low_complexity 1 28 0 277 149 43 43 chr20 18260938 18261032 -53892850 + (CTATA)n Simple_repeat Simple_repeat 2 95 0 38 39 0 0 chr20 18261844 18261896 -53891986 + AT_rich Low_complexity Low_complexity 1 52 0 25 51 0 0 chr20 18262114 18262153 -53891729 + AT_rich Low_complexity Low_complexity 1 39 0 2243 65 282 6 chr20 18263788 18264139 -53889743 - LTR7 LTR ERV1 -2 448 1 2475 92 45 18 chr20 18264139 18264519 -53889363 - HERVH LTR ERV1 0 7713 7324 1347 139 17 38 chr20 18264519 18264756 -53889126 - HERVH LTR ERV1 -1894 5819 5588 * 4347 151 0 1 chr20 18264736 18265399 -53888483 - HERVH LTR ERV1 -2564 5149 4488 6361 83 2 2 chr20 18265401 18266255 -53887627 - HERVH LTR ERV1 -3720 3993 3140 * 20805 96 6 24 chr20 18266234 18269285 -53884597 - HERVH LTR ERV1 -4718 2995 1 2144 86 282 6 chr20 18269287 18269638 -53884244 - LTR7 LTR ERV1 -2 448 1 1170 247 75 29 chr20 18269677 18270061 -53883821 + L1ME3A LINE L1 5768 6169 -1 1844 203 25 11 chr20 18270610 18270970 -53882912 - MLT1A1 LTR MaLR 0 365 1 188 315 0 0 chr20 18271067 18271121 -53882761 + MIR SINE MIR 13 66 -196 408 318 104 65 chr20 18271458 18271861 -53882021 + L2 LINE L2 2811 3229 -43 1443 208 42 66 chr20 18273206 18273586 -53880296 - MLT1A2 LTR MaLR 0 374 4 888 264 277 5 chr20 18273752 18274146 -53879736 + LTR33 LTR ERVL 1 501 -20 241 280 13 0 chr20 18274384 18274459 -53879423 + (TAA)n Simple_repeat Simple_repeat 1 76 0 304 309 25 37 chr20 18274477 18274639 -53879243 - MIR SINE MIR -50 212 53 180 269 0 39 chr20 18275820 18275872 -53878010 - L2 LINE L2 -95 3218 3169 192 125 0 0 chr20 18275878 18275910 -53877972 + (CA)n Simple_repeat Simple_repeat 1 32 0 440 280 126 6 chr20 18277197 18277372 -53876510 + MIR SINE MIR 53 248 -14 31 26 0 0 chr20 18277451 18277489 -53876393 + AT_rich Low_complexity Low_complexity 1 38 0 212 130 22 0 chr20 18277492 18277538 -53876344 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 549 278 132 110 chr20 18278215 18278806 -53875076 + L1MEd LINE L1 114 717 -5488 302 328 25 17 chr20 18278809 18278928 -53874954 + L1MEd LINE L1 1571 1690 -4706 310 267 45 102 chr20 18279291 18279467 -53874415 + L1MEd LINE L1 2181 2346 -4050 405 340 67 8 chr20 18279509 18279747 -53874135 + L1MEd LINE L1 2554 2805 -3410 548 243 107 63 chr20 18279747 18279953 -53873929 + MER58C DNA MER1_type 1 215 0 667 259 15 41 chr20 18279994 18280191 -53873691 - L2 LINE L2 -6 3307 3116 1207 189 112 40 chr20 18280242 18280564 -53873318 - MER2 DNA MER2_type 0 345 1 24 53 0 0 chr20 18280564 18280602 -53873280 + AT_rich Low_complexity Low_complexity 1 38 0 304 262 90 83 chr20 18280671 18280745 -53873137 + L1MEd LINE L1 3077 3149 -3066 1719 179 7 17 chr20 18280745 18281042 -53872840 + AluJo SINE Alu 1 294 -18 304 262 90 83 chr20 18281042 18281257 -53872625 + L1MEd LINE L1 3149 3368 -2847 2058 145 0 0 chr20 18281305 18281595 -53872287 + AluSx SINE Alu 1 290 -22 320 271 107 55 chr20 18281607 18281917 -53871965 + L1MEd LINE L1 3439 3764 -2451 22 56 0 0 chr20 18281934 18281970 -53871912 + AT_rich Low_complexity Low_complexity 1 36 0 1199 203 78 17 chr20 18282041 18282336 -53871546 + L1MB7 LINE L1 5809 6121 -63 1487 206 52 14 chr20 18282341 18282686 -53871196 + MLT1A1 LTR MaLR 6 363 -2 283 293 71 25 chr20 18282706 18282904 -53870978 + L1MEd LINE L1 3944 4150 -2065 336 112 118 33 chr20 18282968 18283120 -53870762 + (TTTAA)n Simple_repeat Simple_repeat 1 165 0 22 35 0 0 chr20 18283125 18283154 -53870728 + AT_rich Low_complexity Low_complexity 1 29 0 241 291 82 15 chr20 18283171 18283305 -53870577 + L1MEd LINE L1 4273 4415 -1800 316 324 35 52 chr20 18284312 18284485 -53869397 + MIR3 SINE MIR 5 174 -34 387 0 0 0 chr20 18284573 18284616 -53869266 + (TG)n Simple_repeat Simple_repeat 2 44 0 2878 154 11 11 chr20 18284658 18284826 -53869056 + L1MB3 LINE L1 5657 5824 -359 789 196 0 0 chr20 18284826 18284959 -53868923 + FLAM_A SINE Alu 1 133 0 2878 154 11 11 chr20 18284959 18285316 -53868566 + L1MB3 LINE L1 5823 6182 -1 688 272 110 13 chr20 18286351 18286867 -53867015 - MLT2E LTR ERVL 0 628 7 401 295 6 38 chr20 18287347 18287579 -53866303 + CT-rich Low_complexity Low_complexity 1 224 0 202 56 56 0 chr20 18287738 18287774 -53866108 + CT-rich Low_complexity Low_complexity 1 38 0 590 300 46 36 chr20 18287786 18288089 -53865793 + L2 LINE L2 3008 3313 0 200 97 32 0 chr20 18288089 18288120 -53865762 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1148 196 128 4 chr20 18288530 18288679 -53865203 - AluJo SINE Alu -3 299 170 215 77 0 26 chr20 18288679 18288718 -53865164 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 1148 196 128 4 chr20 18288718 18288833 -53865049 - AluJo SINE Alu -132 170 2 21 0 0 0 chr20 18289126 18289147 -53864735 + AT_rich Low_complexity Low_complexity 1 21 0 231 133 0 0 chr20 18289164 18289209 -53864673 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 56 0 0 chr20 18289249 18289285 -53864597 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 18290270 18290305 -53863577 + AT_rich Low_complexity Low_complexity 1 35 0 4541 18 0 2 chr20 18290501 18291176 -53862706 - L1PA3 LINE L1 -373 5782 5109 3361 28 0 0 chr20 18291176 18291565 -53862317 + L1PA3 LINE L1 5763 6153 -2 7127 177 109 27 chr20 18291856 18293399 -53860483 + MER52A LTR ERV1 1 1755 0 396 247 41 94 chr20 18294166 18294433 -53859449 - MLT1K LTR MaLR -5 583 331 240 281 73 24 chr20 18294546 18294628 -53859254 - MIR SINE MIR -153 109 24 527 224 83 26 chr20 18295230 18295386 -53858496 + L1ME3 LINE L1 5969 6133 -29 1830 167 38 53 chr20 18295973 18296369 -53857513 - MLT1B LTR MaLR 0 390 1 281 266 13 0 chr20 18296662 18296741 -53857141 + L2 LINE L2 2897 2976 -337 666 116 0 0 chr20 18296821 18296916 -53856966 - AluS SINE Alu -217 95 1 745 208 94 0 chr20 18297168 18297327 -53856555 + MER8 DNA MER2_type 1 174 -65 392 133 13 40 chr20 18297363 18297438 -53856444 - Tigger2 DNA MER2_type -2645 73 1 1076 172 235 8 chr20 18299379 18299494 -53854388 + AluJo SINE Alu 2 90 -212 216 0 0 0 chr20 18299494 18299518 -53854364 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 1076 172 235 8 chr20 18299518 18299640 -53854242 + AluJo SINE Alu 90 293 -9 251 300 83 33 chr20 18300055 18300175 -53853707 - MER102a DNA MER1_type -1 329 204 535 295 76 19 chr20 18300512 18300874 -53853008 - MLT1J2 LTR MaLR 0 450 43 181 367 133 0 chr20 18300963 18301091 -53852791 - L2 LINE L2 -1 3271 3127 25 51 0 0 chr20 18301722 18301761 -53852121 + AT_rich Low_complexity Low_complexity 1 39 0 277 344 99 0 chr20 18302553 18302684 -53851198 + L2 LINE L2 3161 3304 -9 1235 265 41 29 chr20 18302745 18303236 -53850646 + Charlie4a DNA MER1_type 12 508 0 227 276 19 43 chr20 18303277 18303393 -53850489 + MIR SINE MIR 31 140 -68 181 171 73 0 chr20 18303364 18303405 -53850477 + L3 LINE CR1 1531 1574 -3 * 622 368 11 11 chr20 18305070 18305339 -53848543 + MLT1I LTR MaLR 1 269 -140 233 196 0 0 chr20 18305309 18305355 -53848527 + MLT1J1 LTR MaLR 275 320 -126 * 242 122 0 41 chr20 18305447 18305496 -53848386 + (TATG)n Simple_repeat Simple_repeat 3 49 0 704 261 190 48 chr20 18306634 18306678 -53847204 - LTR16C LTR ERVL -8 483 447 2044 231 89 8 chr20 18306678 18307194 -53846688 - MER74A LTR ERVL 0 558 1 704 261 190 48 chr20 18307194 18307486 -53846396 - LTR16C LTR ERVL -44 447 99 205 269 21 0 chr20 18308030 18308123 -53845759 + (TA)n Simple_repeat Simple_repeat 2 96 0 390 21 0 0 chr20 18308135 18308182 -53845700 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 249 322 0 23 chr20 18308242 18308329 -53845553 + CT-rich Low_complexity Low_complexity 5 89 0 222 200 0 50 chr20 18309249 18309309 -53844573 + CT-rich Low_complexity Low_complexity 3 59 0 1381 177 23 34 chr20 18309516 18309782 -53844100 + AluJo SINE Alu 39 301 -11 2341 108 0 0 chr20 18310081 18310388 -53843494 + AluSx SINE Alu 1 307 -5 1263 218 100 50 chr20 18310559 18311058 -53842824 - L1MC4 LINE L1 -1 8041 7518 6123 102 12 12 chr20 18311089 18312383 -53841499 + L1PA11 LINE L1 4879 6172 -2 747 251 50 38 chr20 18312393 18312727 -53841155 - LTR37B LTR ERV1 -4 458 90 21 36 0 0 chr20 18313428 18313456 -53840426 + AT_rich Low_complexity Low_complexity 1 28 0 1571 175 0 0 chr20 18313809 18314072 -53839810 - AluJb SINE Alu 0 306 44 2154 125 3 0 chr20 18314079 18314374 -53839508 - AluSg SINE Alu -14 296 1 327 135 0 19 chr20 18314375 18314427 -53839455 - AluJb SINE Alu -252 51 1 440 302 103 30 chr20 18314530 18314957 -53838925 - L1ME4a LINE L1 -74 6047 5590 1616 175 56 7 chr20 18315203 18315489 -53838393 + AluJb SINE Alu 1 300 -12 499 296 51 23 chr20 18315523 18315699 -53838183 + MIR SINE MIR 82 262 0 458 195 213 6 chr20 18316875 18317020 -53836862 - MER5A DNA MER1_type -6 183 4 570 279 25 13 chr20 18317049 18317207 -53836675 - MER5A DNA MER1_type -21 168 9 213 192 0 50 chr20 18317340 18317403 -53836479 + MIR SINE MIR 106 145 -63 478 196 11 0 chr20 18317480 18317572 -53836310 - MER115 DNA AcHobo -8 685 593 1878 279 24 2 chr20 18317583 18318052 -53835830 - Zaphod DNA AcHobo -3434 597 119 484 277 122 64 chr20 18318866 18319162 -53834720 - MLT1J LTR MaLR -198 313 1 217 226 19 38 chr20 18321282 18321335 -53832547 - MIR SINE MIR -167 95 44 452 270 17 0 chr20 18321930 18322045 -53831837 - MLT1G1 LTR MaLR -478 117 1 807 192 106 134 chr20 18322522 18322842 -53831040 - L1ME2 LINE L1 -2 6162 5855 2891 16 0 0 chr20 18322842 18323160 -53830722 - AluYb8 SINE Alu 0 318 1 807 192 106 134 chr20 18323160 18323256 -53830626 - L1ME2 LINE L1 -309 5855 5758 * 5145 188 77 61 chr20 18323254 18323561 -53830321 - L1MDa LINE L1 -4449 2091 1791 2212 114 0 3 chr20 18323561 18323867 -53830015 - AluSg SINE Alu -5 305 1 5145 188 77 61 chr20 18323867 18325215 -53828667 - L1MDa LINE L1 -4749 1791 321 261 0 0 0 chr20 18325215 18325244 -53828638 + (TGG)n Simple_repeat Simple_repeat 3 31 0 * 333 0 0 0 chr20 18325243 18325280 -53828602 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1175 212 78 12 chr20 18325280 18325535 -53828347 - L1MDa LINE L1 -6260 280 9 233 179 0 0 chr20 18325603 18325642 -53828240 + MIR SINE MIR 209 247 -15 201 154 0 0 chr20 18326662 18326701 -53827181 + T-rich Low_complexity Low_complexity 1 39 0 2048 143 138 5 chr20 18326721 18327099 -53826783 + MSTA LTR MaLR 1 428 0 2159 182 24 7 chr20 18327100 18327523 -53826359 - L1MB7 LINE L1 -51 6133 5704 2323 164 19 19 chr20 18327523 18327943 -53825939 + MSTB LTR MaLR 1 420 -6 1896 154 46 0 chr20 18327944 18328289 -53825593 - L1MB7 LINE L1 -471 5713 5353 21 0 0 0 chr20 18328461 18328482 -53825400 + AT_rich Low_complexity Low_complexity 1 21 0 724 200 5 93 chr20 18328927 18329132 -53824750 + MER5A DNA MER1_type 3 189 0 601 229 0 7 chr20 18330032 18330172 -53823710 - FLAM_C SINE Alu 0 143 5 696 136 0 0 chr20 18330554 18330685 -53823197 + FLAM_C SINE Alu 18 148 0 405 0 0 0 chr20 18331384 18331429 -53822453 + (TG)n Simple_repeat Simple_repeat 2 46 0 21 71 0 0 chr20 18331684 18331726 -53822156 + AT_rich Low_complexity Low_complexity 1 42 0 363 289 36 101 chr20 18331812 18332199 -53821683 + HAL1 LINE L1 963 1324 -1183 1744 86 8 0 chr20 18332223 18332480 -53821402 + L1MA2 LINE L1 6046 6304 0 22 0 0 0 chr20 18332656 18332678 -53821204 + AT_rich Low_complexity Low_complexity 1 22 0 229 284 11 11 chr20 18332958 18333046 -53820836 + L2 LINE L2 3085 3172 -141 353 269 161 20 chr20 18333433 18333582 -53820300 - MIR SINE MIR -23 239 70 2217 67 0 0 chr20 18334921 18335188 -53818694 + AluY SINE Alu 27 293 -18 24 0 0 85 chr20 18335530 18335577 -53818305 + AT_rich Low_complexity Low_complexity 1 43 0 241 277 24 24 chr20 18336626 18336709 -53817173 - L3 LINE CR1 -120 1457 1375 213 208 0 21 chr20 18336989 18337037 -53816845 + L2 LINE L2 3265 3311 -2 986 264 70 51 chr20 18339891 18340415 -53813467 + MLT1G LTR MaLR 10 553 -2 351 245 86 58 chr20 18340430 18340569 -53813313 - MARNA DNA Mariner -3 583 441 2126 120 0 47 chr20 18340791 18341108 -53812774 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr20 18341260 18341290 -53812592 + AT_rich Low_complexity Low_complexity 1 30 0 1024 280 94 57 chr20 18341505 18342132 -53811750 - L1MC4a LINE L1 -497 5657 5523 384 298 75 25 chr20 18342243 18342404 -53811478 - MIR3 SINE MIR -23 185 17 268 287 42 56 chr20 18342905 18343048 -53810834 - MIR3 SINE MIR -30 178 38 245 98 24 0 chr20 18343481 18343522 -53810360 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 338 227 27 18 chr20 18343820 18343930 -53809952 - MER103 DNA DNA -2 164 54 204 67 0 0 chr20 18343952 18343982 -53809900 + (T)n Simple_repeat Simple_repeat 1 30 0 2248 113 0 7 chr20 18344608 18344918 -53808964 - AluSc SINE Alu 0 309 2 228 200 0 0 chr20 18348180 18348230 -53805652 + CT-rich Low_complexity Low_complexity 3 52 0 253 270 40 14 chr20 18348546 18348620 -53805262 + MIR SINE MIR 64 139 -123 405 0 0 0 chr20 18350095 18350140 -53803742 + (TA)n Simple_repeat Simple_repeat 1 45 0 2635 27 0 3 chr20 18350142 18350443 -53803439 - AluY SINE Alu -11 300 1 317 248 179 0 chr20 18352596 18352713 -53801169 - MIR SINE MIR 0 262 125 1404 260 141 10 chr20 18353050 18353646 -53800236 + MER20B DNA MER1_type 1 674 -109 971 276 68 45 chr20 18353646 18354113 -53799769 - LTR16C LTR ERVL 0 491 14 411 261 9 0 chr20 18354120 18354231 -53799651 + MER20B DNA MER1_type 667 778 -5 198 0 0 0 chr20 18355297 18355319 -53798563 + (T)n Simple_repeat Simple_repeat 1 22 0 22 0 0 0 chr20 18355402 18355424 -53798458 + AT_rich Low_complexity Low_complexity 1 22 0 807 169 76 47 chr20 18356539 18356711 -53797171 + FRAM SINE Alu 1 176 0 1471 220 11 27 chr20 18356768 18357141 -53796741 + MLT1A2 LTR MaLR 4 370 -4 303 190 0 0 chr20 18357146 18357204 -53796678 + L1MC5 LINE L1 7856 7913 -48 251 283 11 22 chr20 18357241 18357333 -53796549 + MIR SINE MIR 137 227 -35 286 289 247 0 chr20 18357345 18357442 -53796440 - L2 LINE L2 -4 3309 3189 1154 236 10 38 chr20 18358098 18358411 -53795471 + L1MC4a LINE L1 7210 7513 -295 906 239 93 30 chr20 18358427 18358728 -53795154 - L1M4 LINE L1 -2275 3871 3552 1240 318 43 7 chr20 18358933 18359351 -53794531 - LTR16A LTR ERVL -2 448 16 204 40 0 0 chr20 18359630 18359655 -53794227 + (CA)n Simple_repeat Simple_repeat 2 26 0 1748 214 14 26 chr20 18359689 18359749 -53794133 - MER63 DNA MER1_type -11 1050 991 2447 60 0 32 chr20 18359749 18360063 -53793819 + AluY SINE Alu 1 304 -7 1748 214 14 26 chr20 18360063 18360417 -53793465 - MER63 DNA MER1_type -70 991 641 1892 159 50 0 chr20 18361668 18361988 -53791894 + MER47A DNA MER2_type 29 364 -2 252 100 0 0 chr20 18362374 18362414 -53791468 + (TG)n Simple_repeat Simple_repeat 1 40 0 2886 169 85 29 chr20 18362664 18363322 -53790560 + L1MB7 LINE L1 5471 6165 -19 185 270 9 113 chr20 18464236 18464351 -53689531 + MIR SINE MIR 89 191 -71 209 319 18 157 chr20 18464509 18464898 -53688984 - L2 LINE L2 -21 3251 2917 2155 151 49 36 chr20 18465172 18465617 -53688265 - L1MB7 LINE L1 -16 6168 5718 402 276 125 52 chr20 18466587 18467011 -53686871 - MLT1J LTR MaLR -52 459 5 294 125 0 0 chr20 18467034 18467082 -53686800 + (TCC)n Simple_repeat Simple_repeat 2 49 0 2189 104 0 4 chr20 18467229 18467550 -53686332 + AluSq SINE Alu 6 325 0 25 0 0 0 chr20 18468055 18468080 -53685802 + AT_rich Low_complexity Low_complexity 1 25 0 663 279 113 0 chr20 18468780 18469009 -53684873 - MIR SINE MIR -2 260 6 2560 40 0 3 chr20 18469154 18469452 -53684430 + AluY SINE Alu 1 297 -14 180 269 125 39 chr20 18470074 18470178 -53683704 - L2 LINE L2 -160 3112 3000 767 214 21 7 chr20 18471509 18471654 -53682228 + FRAM SINE Alu 1 146 -30 255 61 0 0 chr20 18471657 18471690 -53682192 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 261 327 49 37 chr20 18471718 18471880 -53682002 + MLT1J LTR MaLR 254 417 -94 344 330 52 0 chr20 18472095 18472210 -53681672 + MIR SINE MIR 34 154 -108 1887 139 13 25 chr20 18472895 18473211 -53680671 + AluJb SINE Alu 1 312 0 232 349 35 0 chr20 18473909 18473995 -53679887 + MIR3 SINE MIR 110 198 -10 591 294 43 19 chr20 18474060 18474271 -53679611 + MIR SINE MIR 43 258 -4 224 154 77 77 chr20 18474670 18474735 -53679147 - L3 LINE CR1 -1101 476 412 1023 162 5 46 chr20 18474840 18475037 -53678845 + MER58A DNA MER1_type 36 224 0 29 94 0 0 chr20 18475039 18475124 -53678758 + AT_rich Low_complexity Low_complexity 1 85 0 265 350 25 19 chr20 18477028 18477185 -53676697 - L2 LINE L2 -823 2491 2334 461 316 30 6 chr20 18477665 18477833 -53676049 + GA-rich Low_complexity Low_complexity 2 173 0 21 0 0 0 chr20 18478063 18478084 -53675798 + AT_rich Low_complexity Low_complexity 1 21 0 642 277 69 50 chr20 18479946 18480249 -53673633 - L2 LINE L2 -9 3304 2996 822 257 115 7 chr20 18480752 18481048 -53672834 + MER46C DNA MER2_type 10 337 -1 243 213 0 49 chr20 18481095 18481156 -53672726 + CT-rich Low_complexity Low_complexity 1 58 0 447 90 75 0 chr20 18481246 18481313 -53672569 - MER53 DNA DNA -117 72 1 333 295 129 42 chr20 18481349 18481800 -53672082 + L2 LINE L2 1803 2292 -1022 707 211 39 6 chr20 18481860 18482040 -53671842 + MER53 DNA DNA 1 186 -3 180 111 0 0 chr20 18482224 18482251 -53671631 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 1575 144 11 49 chr20 18482468 18482752 -53671130 + AluJo SINE Alu 28 300 -12 474 299 26 20 chr20 18482913 18483168 -53670714 + GA-rich Low_complexity Low_complexity 1 256 0 415 295 9 0 chr20 18484042 18484147 -53669735 + MIR3 SINE MIR 87 192 -16 28 29 0 0 chr20 18485733 18485768 -53668114 + AT_rich Low_complexity Low_complexity 1 35 0 265 291 0 0 chr20 18485832 18485887 -53667995 + L2 LINE L2 3207 3261 -11 1294 139 0 29 chr20 18486012 18486220 -53667662 + AluSg/x SINE Alu 84 285 -25 217 250 0 19 chr20 18487965 18488017 -53665865 - L2 LINE L2 -1 3271 3221 1508 134 142 19 chr20 18488804 18489072 -53664810 - AluJb SINE Alu -1 301 1 2907 219 68 12 chr20 18489237 18490035 -53663847 + MER63C DNA MER1_type 1 842 -88 499 289 71 40 chr20 18490246 18490471 -53663411 - L2 LINE L2 -140 3173 2942 972 318 46 44 chr20 18490537 18491104 -53662778 - L2 LINE L2 -465 2849 2282 348 209 0 0 chr20 18491104 18491171 -53662711 - MER116 DNA Mariner 0 80 14 198 167 0 0 chr20 18492170 18492206 -53661676 + CT-rich Low_complexity Low_complexity 3 38 0 2200 70 3 0 chr20 18492337 18492624 -53661258 - L1PA7 LINE L1 -1 6153 5866 211 229 0 21 chr20 18493109 18493157 -53660725 + T-rich Low_complexity Low_complexity 3 49 0 2452 85 0 0 chr20 18493300 18493606 -53660276 + AluY SINE Alu 1 306 -5 477 346 78 6 chr20 18493634 18493821 -53660061 + MIR3 SINE MIR 4 206 -2 348 303 5 128 chr20 18494589 18494800 -53659082 + MIR SINE MIR 60 244 -18 216 235 0 0 chr20 18496155 18496223 -53657659 + (TA)n Simple_repeat Simple_repeat 1 68 0 279 239 23 11 chr20 18496250 18496338 -53657544 + (TA)n Simple_repeat Simple_repeat 1 89 0 269 241 138 0 chr20 18496392 18496479 -53657403 + L1ME LINE L1 1253 1351 -5045 220 222 16 16 chr20 18496486 18496549 -53657333 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 333 287 73 54 chr20 18496658 18496787 -53657095 + L1ME LINE L1 4578 4703 -1512 1680 199 7 0 chr20 18496787 18497093 -53656789 + AluJo SINE Alu 1 308 -4 333 287 73 54 chr20 18497093 18497280 -53656602 + L1ME LINE L1 4703 4900 -1315 1471 204 17 27 chr20 18497426 18497720 -53656162 - AluJo SINE Alu -21 291 1 21 36 0 0 chr20 18497787 18497815 -53656067 + AT_rich Low_complexity Low_complexity 1 28 0 563 291 74 34 chr20 18497887 18498265 -53655617 + L1ME LINE L1 5327 5719 -512 21 0 0 0 chr20 18499598 18499619 -53654263 + AT_rich Low_complexity Low_complexity 1 21 0 2219 106 0 3 chr20 18501727 18502028 -53651854 + AluSx SINE Alu 1 300 -12 695 199 25 19 chr20 18502186 18502347 -53651535 - MER5A DNA MER1_type -27 162 1 23 54 0 0 chr20 18502572 18502609 -53651273 + AT_rich Low_complexity Low_complexity 1 37 0 2358 88 0 0 chr20 18503164 18503459 -53650423 + AluSg SINE Alu 1 295 -15 1510 161 33 50 chr20 18503638 18503937 -53649945 + AluJo SINE Alu 1 294 -18 22 0 0 0 chr20 18504372 18504394 -53649488 + AT_rich Low_complexity Low_complexity 1 22 0 2159 100 14 3 chr20 18504815 18505106 -53648776 - AluSg SINE Alu -16 294 1 22 0 0 0 chr20 18506453 18506475 -53647407 + AT_rich Low_complexity Low_complexity 1 22 0 435 119 0 0 chr20 18507454 18507521 -53646361 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 315 169 46 15 chr20 18507521 18507586 -53646296 + CT-rich Low_complexity Low_complexity 2 68 0 25 0 0 0 chr20 18507616 18507641 -53646241 + AT_rich Low_complexity Low_complexity 1 25 0 4307 238 61 22 chr20 18507896 18508196 -53645686 + L1MD2 LINE L1 3843 4130 -2112 2169 99 61 0 chr20 18508196 18508489 -53645393 + AluSx SINE Alu 1 311 -1 4307 238 61 22 chr20 18508489 18509896 -53643986 + L1MD2 LINE L1 4130 5629 -613 2267 228 114 11 chr20 18510072 18510765 -53643117 + L1MD2 LINE L1 5604 6359 0 38 39 0 0 chr20 18510924 18510976 -53642906 + AT_rich Low_complexity Low_complexity 1 52 0 220 149 64 0 chr20 18511314 18511361 -53642521 + (TTAAA)n Simple_repeat Simple_repeat 3 52 0 1670 175 79 23 chr20 18511514 18511868 -53642014 + MLT1A2 LTR MaLR 1 374 0 2535 58 0 6 chr20 18512382 18512694 -53641188 + AluY SINE Alu 1 310 -1 1908 159 7 3 chr20 18513700 18513989 -53639893 - AluSx SINE Alu -22 290 1 808 262 31 26 chr20 18514137 18514366 -53639516 - MIR SINE MIR -10 252 23 1828 252 75 68 chr20 18514667 18515397 -53638485 + MER21B LTR ERV1 1 735 -128 427 263 73 7 chr20 18515432 18515569 -53638313 + MIR SINE MIR 77 222 -40 399 300 82 45 chr20 18515612 18515987 -53637895 - L1ME4a LINE L1 -206 5915 5516 9190 25 4 0 chr20 18515987 18517839 -53636043 - L1PA4 LINE L1 -11 6144 4289 399 300 82 45 chr20 18517839 18517950 -53635932 - L1ME4a LINE L1 -605 5516 5411 782 287 50 4 chr20 18518800 18519058 -53634824 - MER77 LTR ERV1 -7 598 329 325 335 68 11 chr20 18519060 18519236 -53634646 - MIR SINE MIR -69 193 8 198 0 0 0 chr20 18519534 18519556 -53634326 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2153 112 0 3 chr20 18520720 18521015 -53632867 - AluSg SINE Alu -16 294 1 2654 93 0 29 chr20 18521602 18521977 -53631905 + THE1B LTR MaLR 1 364 0 673 285 45 77 chr20 18522073 18522515 -53631367 - MLT1J2 LTR MaLR -22 428 1 356 272 134 69 chr20 18522631 18522788 -53631094 - L2 LINE L2 0 3313 3133 276 100 0 0 chr20 18522788 18522828 -53631054 + (TTATA)n Simple_repeat Simple_repeat 1 40 0 356 272 134 69 chr20 18522828 18522916 -53630966 - L2 LINE L2 -180 3133 3052 554 209 0 35 chr20 18524250 18524365 -53629517 + FRAM SINE Alu 12 122 -54 23 0 0 0 chr20 18524365 18524388 -53629494 + AT_rich Low_complexity Low_complexity 1 23 0 950 200 24 29 chr20 18524732 18524942 -53628940 - MER3 DNA MER1_type 0 209 1 327 283 10 10 chr20 18525121 18525220 -53628662 + L2 LINE L2 3214 3312 -1 1460 208 40 30 chr20 18525246 18525616 -53628266 + MLT1A2 LTR MaLR 1 374 0 223 280 150 30 chr20 18526830 18526930 -53626952 + MIR SINE MIR 25 136 -72 1624 201 0 10 chr20 18528427 18528715 -53625167 - AluJo SINE Alu -21 291 7 34 42 0 0 chr20 18529119 18529167 -53624715 + AT_rich Low_complexity Low_complexity 1 48 0 696 101 0 0 chr20 18529538 18529627 -53624255 + FLAM SINE Alu 38 126 -17 203 289 13 0 chr20 18530028 18530054 -53623828 + GA-rich Low_complexity Low_complexity 2 26 -52 2427 91 0 0 chr20 18530054 18530363 -53623519 + AluSg1 SINE Alu 1 309 0 203 289 13 0 chr20 18530363 18530412 -53623470 + GA-rich Low_complexity Low_complexity 26 78 0 200 143 24 0 chr20 18531292 18531334 -53622548 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 778 252 49 24 chr20 18531702 18531948 -53621934 + MIR SINE MIR 7 258 -4 1395 222 36 17 chr20 18532423 18532784 -53621098 + MER95 LTR ERV 5 372 -59 1078 142 41 23 chr20 18532787 18533006 -53620876 + L1MA8 LINE L1 6063 6285 -6 272 121 182 15 chr20 18533238 18533304 -53620578 + MER95 LTR ERV 353 429 -2 222 91 0 0 chr20 18534714 18534747 -53619135 + (TG)n Simple_repeat Simple_repeat 2 34 0 294 289 105 0 chr20 18535979 18536093 -53617789 - MIR SINE MIR -131 131 6 552 276 29 11 chr20 18536758 18536932 -53616950 - MIR SINE MIR -61 201 25 761 257 22 6 chr20 18537193 18537376 -53616506 - MER5A DNA MER1_type -3 186 1 181 169 34 34 chr20 18538659 18538718 -53615164 + (TATG)n Simple_repeat Simple_repeat 2 60 0 21 71 0 0 chr20 18538933 18538975 -53614907 + AT_rich Low_complexity Low_complexity 1 42 0 255 169 0 34 chr20 18540152 18540211 -53613671 - MER5A DNA MER1_type 0 189 133 960 212 129 62 chr20 18540213 18540665 -53613217 - MER39 LTR ERV1 0 707 5 322 194 0 45 chr20 18540677 18540744 -53613138 - MER5A DNA MER1_type -73 116 53 735 167 0 38 chr20 18540902 18541034 -53612848 - FLAM_C SINE Alu -16 127 1 488 245 97 97 chr20 18541407 18541746 -53612136 - L1ME4a LINE L1 -212 5909 5571 767 273 92 51 chr20 18542009 18542635 -53611247 + L2 LINE L2 2659 3308 -5 996 269 58 52 chr20 18542704 18542778 -53611104 + MER39 LTR ERV1 1 73 -634 2532 98 45 3 chr20 18542778 18543136 -53610746 + THE1C LTR MaLR 1 373 -2 996 269 58 52 chr20 18543136 18543553 -53610329 + MER39 LTR ERV1 73 707 0 23 0 0 0 chr20 18544031 18544054 -53609828 + AT_rich Low_complexity Low_complexity 1 23 0 203 321 113 28 chr20 18547454 18547560 -53606322 - MIR SINE MIR -61 147 33 2248 109 0 3 chr20 18548400 18548703 -53605179 + AluSc SINE Alu 1 302 -7 551 279 79 16 chr20 18549534 18549724 -53604158 + MLT1J2 LTR MaLR 24 225 -225 2891 176 69 38 chr20 18550067 18550263 -53603619 - L1MB5 LINE L1 -7 6665 6477 2029 100 21 0 chr20 18550263 18550542 -53603340 - AluSx SINE Alu -5 307 23 2891 176 69 38 chr20 18550542 18551038 -53602844 - L1MB5 LINE L1 -195 6477 5951 6686 216 38 84 chr20 18551046 18552528 -53601354 - L1MB5 LINE L1 -1518 5126 3577 1021 247 167 46 chr20 18552528 18552952 -53600930 + MLT2B1 LTR ERVL 3 489 -31 539 73 0 12 chr20 18552952 18553034 -53600848 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 1021 247 167 46 chr20 18553034 18553070 -53600812 + MLT2B1 LTR ERVL 489 519 -1 6686 216 38 84 chr20 18553070 18555465 -53598417 - L1MB5 LINE L1 -3067 3577 1349 844 289 57 41 chr20 18555473 18555892 -53597990 - L1MB5 LINE L1 -5758 784 359 769 204 0 0 chr20 18556047 18556179 -53597703 - AluJo SINE Alu -177 135 4 434 312 19 0 chr20 18556212 18556366 -53597516 - L1MB5 LINE L1 -6384 158 2 23 54 0 0 chr20 18556606 18556643 -53597239 + AT_rich Low_complexity Low_complexity 1 37 0 2528 59 0 3 chr20 18556962 18557266 -53596616 - AluY SINE Alu -8 303 1 273 298 11 0 chr20 18557445 18557539 -53596343 + (CATA)n Simple_repeat Simple_repeat 1 95 0 219 186 0 0 chr20 18557628 18557671 -53596211 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 317 288 25 75 chr20 18557769 18557929 -53595953 - L1MC4a LINE L1 -1777 6031 5880 619 171 93 102 chr20 18557943 18558276 -53595606 - L1MC5 LINE L1 -46 7915 7586 235 194 16 32 chr20 18558258 18558320 -53595562 - L1MC4a LINE L1 -2119 5689 5629 * 3514 139 7 0 chr20 18558540 18559094 -53594788 - L1PA16 LINE L1 -3 6163 5606 196 68 23 45 chr20 18559182 18559226 -53594656 + (TTTTTG)n Simple_repeat Simple_repeat 1 43 0 26 0 0 0 chr20 18560265 18560291 -53593591 + AT_rich Low_complexity Low_complexity 1 26 0 473 325 53 22 chr20 18560292 18560520 -53593362 - MIR SINE MIR -26 236 2 430 349 165 34 chr20 18560546 18560898 -53592984 + L2 LINE L2 2870 3267 -5 2602 203 25 102 chr20 18562197 18563142 -53590740 + L1MC4 LINE L1 7170 8042 0 1203 169 106 33 chr20 18563322 18563686 -53590196 + MSTB LTR MaLR 1 424 -2 568 267 140 36 chr20 18563925 18564146 -53589736 + MIR SINE MIR 17 260 -2 423 300 0 40 chr20 18564393 18564616 -53589266 + L1MC4a LINE L1 5726 5939 -1869 215 222 48 0 chr20 18565310 18565373 -53588509 - MIR SINE MIR -71 137 72 621 301 55 34 chr20 18565377 18565504 -53588378 - MER102b DNA MER1_type -1091 337 214 2558 173 24 18 chr20 18565504 18566014 -53587868 - LTR10D LTR ERV1 0 513 1 621 301 55 34 chr20 18566014 18566212 -53587670 - MER102b DNA MER1_type -1214 214 5 22 0 0 0 chr20 18566318 18566340 -53587542 + AT_rich Low_complexity Low_complexity 1 22 0 185 346 156 17 chr20 18566626 18566973 -53586909 - L2 LINE L2 -357 2957 2563 287 298 265 7 chr20 18567432 18567583 -53586299 - MIR SINE MIR 0 262 73 247 246 0 7 chr20 18567583 18567662 -53586220 + L1MC4a LINE L1 5347 5423 -741 617 243 183 70 chr20 18567695 18568096 -53585786 + L1MC4a LINE L1 5504 5955 -1853 255 61 0 0 chr20 18568096 18568129 -53585753 + (TG)n Simple_repeat Simple_repeat 2 34 0 617 243 183 70 chr20 18568129 18568143 -53585739 + L1MC4a LINE L1 5955 5966 -1842 673 180 23 8 chr20 18568762 18568890 -53584992 + FLAM_C SINE Alu 4 133 0 518 218 241 0 chr20 18569889 18570022 -53583860 - MER5A DNA MER1_type -15 174 10 667 222 48 0 chr20 18570037 18570204 -53583678 + MER5B DNA MER1_type 1 175 -3 342 288 144 45 chr20 18570251 18570473 -53583409 + L3 LINE CR1 903 1146 -431 677 314 57 13 chr20 18571496 18571725 -53582157 + MIR SINE MIR 21 259 -3 401 305 70 32 chr20 18572217 18572404 -53581478 - MIR SINE MIR -53 209 16 21 0 0 0 chr20 18572589 18572610 -53581272 + AT_rich Low_complexity Low_complexity 1 21 0 674 206 161 62 chr20 18574134 18574323 -53579559 - L1MC5 LINE L1 -435 7526 7357 2847 124 28 2 chr20 18574323 18574760 -53579122 - MER83 LTR ERV1 0 448 1 674 206 161 62 chr20 18574760 18574852 -53579030 - L1MC5 LINE L1 -604 7357 7276 345 47 0 0 chr20 18574852 18574895 -53578987 + (TG)n Simple_repeat Simple_repeat 1 43 0 674 206 161 62 chr20 18574895 18575015 -53578867 - L1MC5 LINE L1 -685 7276 7084 2467 122 8 3 chr20 18575165 18575527 -53578355 - THE1B LTR MaLR 0 364 1 229 205 61 0 chr20 18575560 18575626 -53578256 - L1MC/D LINE L1 -727 5439 5384 442 242 60 71 chr20 18576266 18576349 -53577533 - Charlie8 DNA MER1_type -147 194 112 2309 92 0 10 chr20 18576349 18576655 -53577227 - AluSq SINE Alu -10 303 1 442 242 60 71 chr20 18576655 18576753 -53577129 - Charlie8 DNA MER1_type -229 112 15 551 325 123 20 chr20 18577279 18577571 -53576311 + L3 LINE CR1 1239 1560 -17 193 282 87 48 chr20 18577807 18577910 -53575972 - MIR SINE MIR -86 122 16 515 87 0 0 chr20 18577956 18578025 -53575857 + THE1C LTR MaLR 3 71 -304 799 158 0 8 chr20 18578316 18578449 -53575433 + FLAM_A SINE Alu 1 132 -1 25 51 0 0 chr20 18578864 18578903 -53574979 + AT_rich Low_complexity Low_complexity 1 39 0 204 214 0 0 chr20 18579634 18579676 -53574206 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 22 56 0 0 chr20 18580296 18580332 -53573550 + AT_rich Low_complexity Low_complexity 1 36 0 218 308 22 22 chr20 18580381 18580472 -53573410 - MIR SINE MIR -62 200 110 301 250 0 0 chr20 18580644 18580700 -53573182 + L2 LINE L2 3215 3270 -2 212 391 69 25 chr20 18580731 18580933 -53572949 + L2 LINE L2 2658 2868 -446 2555 196 20 14 chr20 18581539 18581580 -53572302 - MLT2B2 LTR ERVL -8 507 468 504 93 0 0 chr20 18581580 18581655 -53572227 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 2555 196 20 14 chr20 18581655 18582112 -53571770 - MLT2B2 LTR ERVL -47 468 6 570 276 81 42 chr20 18582120 18582403 -53571479 + MLT1K LTR MaLR 295 588 0 505 264 66 74 chr20 18583823 18584081 -53569801 + L2 LINE L2 3043 3298 -15 944 226 31 86 chr20 18584960 18585450 -53568432 - LTR37B LTR ERV1 -5 463 1 248 222 123 25 chr20 18585647 18585728 -53568154 - MIR SINE MIR -108 154 66 342 290 0 69 chr20 18586041 18586172 -53567710 + L1MC5 LINE L1 7298 7419 -542 552 217 104 51 chr20 18586341 18586677 -53567205 + L1MC5 LINE L1 7560 7913 -48 2337 109 3 0 chr20 18586768 18587104 -53566778 - AluSq SINE Alu 0 313 1 1990 140 32 24 chr20 18587273 18587645 -53566237 + THE1C LTR MaLR 1 375 0 10522 103 21 35 chr20 18587645 18589247 -53564635 + THE1C-int LTR MaLR 1 1580 0 1950 153 26 34 chr20 18589247 18589625 -53564257 + THE1C LTR MaLR 1 375 0 551 155 0 0 chr20 18589627 18589711 -53564171 + 5S rRNA rRNA 7 90 -31 28 29 0 0 chr20 18590146 18590181 -53563701 + AT_rich Low_complexity Low_complexity 1 35 0 253 263 147 11 chr20 18590469 18590564 -53563318 - L2 LINE L2 -1 3312 3205 296 292 0 0 chr20 18590664 18590736 -53563146 + MIR SINE MIR 181 252 -10 186 293 20 61 chr20 18591956 18592055 -53561827 - MIR SINE MIR -132 130 36 204 220 0 60 chr20 18592664 18592714 -53561168 + polypyrimidine Low_complexity Low_complexity 3 49 0 222 234 0 0 chr20 18592717 18592764 -53561118 - MIR SINE MIR -139 123 77 679 172 185 0 chr20 18592844 18592995 -53560887 + MER5A DNA MER1_type 11 189 0 419 259 75 26 chr20 18593191 18593522 -53560360 + MLT1L LTR MaLR 224 614 -1 2540 63 0 0 chr20 18594072 18594375 -53559507 - AluY SINE Alu -8 303 1 243 306 118 69 chr20 18595057 18595201 -53558681 + L2 LINE L2 2683 2833 -481 199 279 0 0 chr20 18595196 18595239 -53558643 + MER5B DNA MER1_type 7 49 -129 * 214 49 24 24 chr20 18595239 18595280 -53558602 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 209 214 54 107 chr20 18595294 18595406 -53558476 - MER5B DNA MER1_type -45 133 28 447 310 81 101 chr20 18595414 18595859 -53558023 + L2 LINE L2 2836 3271 -1 449 329 83 9 chr20 18596496 18596724 -53557158 - MIR SINE MIR 0 262 18 2904 87 27 40 chr20 18597006 18597456 -53556426 - MLT2A1 LTR ERVL 0 444 1 355 164 16 0 chr20 18598401 18598462 -53555420 - AluS SINE Alu -241 62 1 25 0 0 0 chr20 18598468 18598493 -53555389 + AT_rich Low_complexity Low_complexity 1 25 0 372 314 103 13 chr20 18599426 18599582 -53554300 - MLT1H LTR MaLR -357 192 23 860 364 99 28 chr20 18599603 18600402 -53553480 + L2 LINE L2 1944 2799 -515 296 401 8 8 chr20 18600982 18601114 -53552768 + L2 LINE L2 3134 3265 -7 505 311 156 34 chr20 18603733 18604260 -53549622 + L2 LINE L2 2727 3309 -4 1881 134 89 17 chr20 18604451 18604801 -53549081 + THE1C LTR MaLR 1 375 0 218 343 66 55 chr20 18608393 18608682 -53545200 + L2 LINE L2 1678 1969 -1345 1857 172 0 0 chr20 18610351 18610664 -53543218 + AluSx SINE Alu 1 313 0 225 280 0 0 chr20 18610838 18610913 -53542969 + L1MD3 LINE L1 7911 7985 -10 687 328 122 45 chr20 18611082 18611591 -53542291 - L2 LINE L2 -552 2762 2215 441 289 143 22 chr20 18611744 18612156 -53541726 + LTR33 LTR ERVL 44 505 -16 187 278 0 125 chr20 18613306 18613378 -53540504 - MIR3 SINE MIR -8 200 138 821 160 0 0 chr20 18614750 18614869 -53539013 + FLAM_C SINE Alu 1 119 -24 286 297 50 0 chr20 18615219 18615320 -53538562 + MIR SINE MIR 49 154 -108 5406 59 3 0 chr20 18615357 18616040 -53537842 - L1PA7 LINE L1 -13 6141 5457 665 189 0 39 chr20 18616195 18616322 -53537560 - FLAM_C SINE Alu -21 122 1 1139 161 0 5 chr20 18616322 18616508 -53537374 - AluSg/x SINE Alu -14 298 114 271 259 63 60 chr20 18617572 18617970 -53535912 + L1ME4a LINE L1 5705 6103 -18 756 256 37 67 chr20 18618325 18618595 -53535287 - MIR SINE MIR 0 262 1 1561 209 154 19 chr20 18618618 18619044 -53534838 + MLT2B1 LTR ERVL 1 547 -7 243 0 0 0 chr20 18619348 18619375 -53534507 + (CA)n Simple_repeat Simple_repeat 2 28 0 276 30 0 0 chr20 18619441 18619474 -53534408 + (CA)n Simple_repeat Simple_repeat 2 34 0 288 154 0 0 chr20 18619483 18619535 -53534347 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 201 267 12 23 chr20 18619886 18619972 -53533910 + CT-rich Low_complexity Low_complexity 4 88 0 2175 133 19 27 chr20 18620018 18620385 -53533497 - THE1B LTR MaLR 0 364 1 336 256 185 38 chr20 18620554 18620765 -53533117 - MLT1J LTR MaLR -30 481 240 275 262 12 0 chr20 18620962 18621046 -53532836 - MLT1J LTR MaLR 0 567 483 1183 142 40 32 chr20 18621053 18621300 -53532582 - L1MA9 LINE L1 -282 6030 5782 459 120 27 0 chr20 18621459 18621534 -53532348 - MLT1B LTR MaLR 0 390 314 2283 179 24 7 chr20 18622965 18623384 -53530498 - MSTB LTR MaLR 0 426 1 286 288 42 34 chr20 18624043 18624161 -53529721 + MIR SINE MIR 118 236 -26 1404 244 142 19 chr20 18624395 18624964 -53528918 - L1ME3A LINE L1 -1 6169 5531 240 268 24 37 chr20 18625792 18625874 -53528008 - MIR SINE MIR -147 115 35 238 333 137 24 chr20 18626510 18626678 -53527204 - MIR3 SINE MIR -6 202 16 548 276 54 63 chr20 18627621 18627784 -53526098 - MIR SINE MIR -26 236 74 608 244 8 0 chr20 18627784 18627915 -53525967 + FLAM_A SINE Alu 2 133 0 548 276 54 63 chr20 18627915 18627972 -53525910 - MIR SINE MIR -188 74 18 2306 87 3 0 chr20 18627984 18628283 -53525599 + AluSp SINE Alu 1 300 -13 1656 169 46 9 chr20 18628614 18628964 -53524918 - L1MA6 LINE L1 0 6300 5938 2308 116 7 0 chr20 18629617 18629927 -53523955 - AluSx SINE Alu 0 312 1 879 244 23 30 chr20 18630270 18630536 -53523346 + LTR16A LTR ERVL 167 430 -20 1241 293 51 33 chr20 18631321 18631775 -53522107 - LTR16C LTR ERVL -1 490 29 282 321 117 88 chr20 18631918 18632329 -53521553 + L2 LINE L2 2850 3272 0 276 111 0 0 chr20 18632868 18632913 -53520969 + (CA)n Simple_repeat Simple_repeat 2 46 0 443 216 48 106 chr20 18633432 18633640 -53520242 - MLT1J LTR MaLR -101 410 215 333 47 0 0 chr20 18633898 18633941 -53519941 + (GA)n Simple_repeat Simple_repeat 2 44 0 1748 161 24 10 chr20 18636006 18636304 -53517578 + AluJb SINE Alu 1 302 -10 2376 98 0 0 chr20 18636467 18636772 -53517110 - AluSx SINE Alu -7 305 1 2370 109 0 0 chr20 18637166 18637479 -53516403 - AluSq SINE Alu 0 313 1 231 323 121 40 chr20 18639172 18639296 -53514586 + MIR3 SINE MIR 39 172 -36 29 0 0 0 chr20 18639535 18639564 -53514318 + AT_rich Low_complexity Low_complexity 1 29 0 286 306 37 28 chr20 18640681 18640770 -53513112 - L2 LINE L2 -2 3270 3181 215 367 85 15 chr20 18640770 18640969 -53512913 + MIR SINE MIR 1 213 -49 301 295 54 0 chr20 18641199 18641328 -53512554 - LTR33A LTR ERVL 0 523 388 322 212 230 0 chr20 18641624 18641789 -53512093 - LTR50 LTR ERVL -592 203 1 1225 319 119 35 chr20 18642413 18643728 -53510154 - L2 LINE L2 -1 3312 1875 1031 308 97 58 chr20 18644569 18645566 -53508316 + L2 LINE L2 2252 3302 -11 213 39 0 0 chr20 18645567 18645593 -53508289 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 246 266 13 25 chr20 18649413 18649492 -53504390 + MIR3 SINE MIR 128 205 -3 26 50 0 0 chr20 18650283 18650323 -53503559 + AT_rich Low_complexity Low_complexity 1 40 0 354 45 0 0 chr20 18650464 18650508 -53503374 + (CA)n Simple_repeat Simple_repeat 1 44 0 2237 125 0 0 chr20 18651179 18651484 -53502398 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 18651895 18651918 -53501964 + AT_rich Low_complexity Low_complexity 1 23 0 246 81 0 0 chr20 18652560 18652597 -53501285 + (TG)n Simple_repeat Simple_repeat 1 37 0 * 255 31 0 0 chr20 18652596 18652628 -53501254 + (GA)n Simple_repeat Simple_repeat 1 32 0 479 289 18 0 chr20 18653271 18653385 -53500497 - MIR SINE MIR -141 121 6 552 271 181 0 chr20 18653599 18653776 -53500106 + MIR SINE MIR 54 262 0 29753 108 14 56 chr20 18653866 18660283 -53493599 + L1PA7 LINE L1 13 6151 -3 1804 201 53 0 chr20 18660376 18660755 -53493127 - MER21B LTR ERV1 -1 862 464 23 33 0 0 chr20 18660850 18660880 -53493002 + AT_rich Low_complexity Low_complexity 1 30 0 2793 78 5 32 chr20 18660882 18661294 -53492588 - L1PA10 LINE L1 0 6168 5768 2290 189 4 62 chr20 18661295 18661792 -53492090 - MER21B LTR ERV1 -391 472 5 278 310 75 27 chr20 18662353 18662540 -53491342 - L2 LINE L2 -2 3311 3116 321 26 0 0 chr20 18662625 18662663 -53491219 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 26 30 0 0 chr20 18663467 18663500 -53490382 + AT_rich Low_complexity Low_complexity 1 33 0 484 259 91 81 chr20 18665423 18665720 -53488162 - LTR16C LTR ERVL -191 300 1 234 0 0 0 chr20 18666529 18666555 -53487327 + (T)n Simple_repeat Simple_repeat 1 26 0 262 213 27 40 chr20 18666610 18666685 -53487197 - MIR SINE MIR -110 152 79 2185 128 3 6 chr20 18666686 18666999 -53486883 + AluSx SINE Alu 1 312 0 488 306 141 51 chr20 18667130 18667578 -53486304 - L2 LINE L2 0 3313 2826 301 259 17 43 chr20 18668010 18668126 -53485756 + L1ME4a LINE L1 5997 6109 -12 696 203 7 46 chr20 18669097 18669250 -53484632 - MER5B DNA MER1_type -26 152 6 895 294 56 33 chr20 18671029 18671420 -53482462 - MLT1J LTR MaLR 0 511 112 237 33 0 0 chr20 18671476 18671506 -53482376 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 797 275 153 12 chr20 18672046 18672366 -53481516 - MLT1G1 LTR MaLR -7 588 224 194 170 0 64 chr20 18672547 18672594 -53481288 - L2 LINE L2 -12 3301 3258 182 329 0 14 chr20 18672624 18672697 -53481185 - MIR SINE MIR -110 152 81 21 57 0 0 chr20 18675687 18675722 -53478160 + AT_rich Low_complexity Low_complexity 1 35 0 499 301 59 70 chr20 18676162 18676418 -53477464 - L2 LINE L2 0 3272 3020 780 134 28 7 chr20 18676682 18676824 -53477058 - L1PA10 LINE L1 -54 6114 5970 2209 70 0 4 chr20 18676832 18677105 -53476777 - AluY SINE Alu -11 300 29 24 0 0 0 chr20 18678616 18678640 -53475242 + AT_rich Low_complexity Low_complexity 1 24 0 271 346 0 0 chr20 18678840 18678918 -53474964 + L2 LINE L2 3236 3313 0 2455 77 0 3 chr20 18679200 18679511 -53474371 + AluSq SINE Alu 1 310 -3 1766 55 0 9 chr20 18679738 18679958 -53473924 - AluY SINE Alu -4 307 90 622 300 34 69 chr20 18680424 18680675 -53473207 - LTR16C LTR ERVL -2 489 256 894 229 35 0 chr20 18680675 18680876 -53473006 + MER3 DNA MER1_type 2 209 0 622 300 34 69 chr20 18680876 18681031 -53472851 - LTR16C LTR ERVL -235 256 97 22 35 0 0 chr20 18681677 18681706 -53472176 + AT_rich Low_complexity Low_complexity 1 29 0 346 191 7 28 chr20 18682547 18682688 -53471194 + (TA)n Simple_repeat Simple_repeat 2 139 0 284 209 128 40 chr20 18683854 18684002 -53469880 + MER103 DNA DNA 4 164 -2 297 0 0 0 chr20 18685644 18685677 -53468205 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2269 112 0 0 chr20 18687737 18688041 -53465841 - AluSq SINE Alu -9 304 1 762 161 0 31 chr20 18688108 18688238 -53465644 - FLAM_C SINE Alu -15 128 3 23 54 0 0 chr20 18688747 18688784 -53465098 + AT_rich Low_complexity Low_complexity 1 37 0 1505 197 54 39 chr20 18689652 18689724 -53464158 - MSTD LTR MaLR 0 396 327 213 39 0 0 chr20 18689724 18689750 -53464132 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1505 197 54 39 chr20 18689750 18690067 -53463815 - MSTD LTR MaLR -69 327 1 380 181 56 49 chr20 18691002 18691146 -53462736 + Charlie7 DNA MER1_type 2440 2584 -28 2021 119 0 11 chr20 18691960 18692246 -53461636 + AluSx SINE Alu 26 308 -4 192 333 46 46 chr20 18692897 18692984 -53460898 + L2 LINE L2 3139 3225 -47 1494 96 9 37 chr20 18693926 18694144 -53459738 - AluSg/x SINE Alu -16 294 83 2378 76 0 0 chr20 18694229 18694520 -53459362 - AluY SINE Alu -20 291 1 180 0 0 0 chr20 18695189 18695209 -53458673 + (T)n Simple_repeat Simple_repeat 1 20 0 241 239 104 0 chr20 18696293 18696360 -53457522 + MER3 DNA MER1_type 41 114 -95 21 36 0 0 chr20 18696458 18696486 -53457396 + AT_rich Low_complexity Low_complexity 1 28 0 419 184 75 134 chr20 18696589 18696790 -53457092 - MER117 DNA MER1_type 0 197 9 247 164 0 36 chr20 18696876 18696931 -53456951 - HsTC2 DNA Tc2 -1843 55 3 2147 110 3 3 chr20 18697202 18697492 -53456390 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr20 18698745 18698766 -53455116 + AT_rich Low_complexity Low_complexity 1 21 0 216 272 0 62 chr20 18699238 18699319 -53454563 - L2 LINE L2 -5 3267 3192 289 248 256 16 chr20 18699457 18699578 -53454304 - MIR SINE MIR -70 192 43 308 325 54 63 chr20 18699712 18700216 -53453666 - L2 LINE L2 -1079 2235 1737 363 23 0 0 chr20 18700860 18700904 -53452978 + (TG)n Simple_repeat Simple_repeat 2 45 0 270 0 0 0 chr20 18701511 18701541 -53452341 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 314 193 83 37 chr20 18702366 18702438 -53451444 - MER69 DNA AcHobo 0 2526 2446 2445 68 0 0 chr20 18702438 18702734 -53451148 + AluY SINE Alu 1 296 -15 314 193 83 37 chr20 18702734 18702770 -53451112 - MER69 DNA AcHobo -80 2446 2413 908 232 53 16 chr20 18702770 18703016 -53450866 - MER69 DNA AcHobo -340 2186 1932 710 193 44 0 chr20 18703027 18703162 -53450720 - MER69 DNA AcHobo -2385 141 1 270 0 0 0 chr20 18703301 18703331 -53450551 + (T)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr20 18703926 18703955 -53449927 + AT_rich Low_complexity Low_complexity 1 29 0 466 294 150 0 chr20 18704316 18704476 -53449406 - MER5A DNA MER1_type -2 187 4 2272 78 0 0 chr20 18705509 18705824 -53448058 - AluSq SINE Alu 0 315 1 606 259 14 0 chr20 18706445 18706592 -53447290 + MIR SINE MIR 48 196 -66 1402 99 9 24 chr20 18706726 18706939 -53446943 + L1PB2 LINE L1 5939 6148 -3 188 238 0 0 chr20 18706958 18707000 -53446882 + MIR SINE MIR 217 258 -4 323 200 40 13 chr20 18707087 18707162 -53446720 + MIR SINE MIR 186 262 0 303 261 168 25 chr20 18707575 18707694 -53446188 - MIR3 SINE MIR -14 194 59 567 273 52 32 chr20 18708764 18709021 -53444861 - LTR33 LTR ERVL -10 513 250 274 233 123 14 chr20 18709021 18709094 -53444788 - MER5B DNA MER1_type -14 164 84 338 267 187 6 chr20 18709178 18709323 -53444559 - LTR33A LTR ERVL -344 177 40 1028 100 3 11 chr20 18709671 18710031 -53443851 + (TA)n Simple_repeat Simple_repeat 1 357 0 24 0 0 0 chr20 18710031 18710055 -53443827 + AT_rich Low_complexity Low_complexity 1 24 0 1092 92 0 0 chr20 18710055 18710419 -53443463 + (TA)n Simple_repeat Simple_repeat 1 364 0 711 258 45 6 chr20 18711389 18711567 -53442315 - MIR SINE MIR -31 231 47 198 250 0 0 chr20 18711653 18711697 -53442185 - MER5A DNA MER1_type -110 79 36 957 221 192 46 chr20 18712743 18713196 -53440686 + LTR33A LTR ERVL 2 520 -3 205 161 0 0 chr20 18713802 18713833 -53440049 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1648 171 79 10 chr20 18715877 18716169 -53437713 - AluJo SINE Alu 0 312 1 648 195 15 103 chr20 18716640 18716835 -53437047 - MER45A DNA AcHobo 0 178 1 570 291 29 12 chr20 18717481 18717653 -53436229 - MLT1J1 LTR MaLR -2 444 270 5999 101 3 3 chr20 18717653 18718750 -53435132 - L1PA13 LINE L1 -5 6158 5055 5647 202 8 5 chr20 18718750 18719897 -53433985 + L1P LINE L1 1514 2663 -3483 814 300 69 4 chr20 18719897 18720157 -53433725 - MLT1J1 LTR MaLR -169 277 1 369 293 51 32 chr20 18720234 18720391 -53433491 + MIR SINE MIR 77 236 -26 1942 146 27 40 chr20 18720442 18720818 -53433064 - THE1C LTR MaLR -4 371 1 208 297 27 0 chr20 18720849 18720923 -53432959 + MIR SINE MIR 186 261 -1 2175 121 13 0 chr20 18721284 18721590 -53432292 + AluSq SINE Alu 1 310 -3 21 0 0 0 chr20 18721896 18721917 -53431965 + AT_rich Low_complexity Low_complexity 1 21 0 330 26 0 0 chr20 18721989 18722028 -53431854 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 2072 130 0 0 chr20 18722375 18722708 -53431174 - AluSx SINE Alu 0 333 1 2102 109 0 27 chr20 18722804 18723098 -53430784 + AluSg SINE Alu 1 286 -24 7531 221 14 0 chr20 18723202 18725354 -53428528 - L1PA16 LINE L1 -9 6157 3944 216 0 0 0 chr20 18725354 18725378 -53428504 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7531 221 14 0 chr20 18725378 18725742 -53428140 - L1PA16 LINE L1 -2222 3944 3587 315 255 90 48 chr20 18729090 18729235 -53424647 + MIR SINE MIR 79 229 -33 489 291 6 63 chr20 18729645 18729820 -53424062 - MIR SINE MIR -56 206 42 216 325 49 57 chr20 18729830 18729953 -53423929 + L2 LINE L2 3146 3267 -5 1026 237 286 13 chr20 18731911 18732299 -53421583 - MLT1G1 LTR MaLR -2 593 100 1865 142 114 67 chr20 18732299 18732812 -53421070 + MER4B LTR ERV1 1 872 0 283 133 48 0 chr20 18732812 18732867 -53421015 - MLT1G LTR MaLR -495 63 1 298 337 156 22 chr20 18733096 18733366 -53420516 + L2 LINE L2 2539 2844 -470 1625 286 19 21 chr20 18733581 18734207 -53419675 - L2 LINE L2 0 3313 2693 262 298 38 46 chr20 18734286 18734417 -53419465 + L2 LINE L2 3184 3313 0 1701 152 47 17 chr20 18735095 18735391 -53418491 - AluJb SINE Alu -7 305 1 22 0 0 0 chr20 18736289 18736311 -53417571 + AT_rich Low_complexity Low_complexity 1 22 0 2080 272 103 81 chr20 18736894 18738189 -53415693 - L2 LINE L2 -1 3312 1987 1520 191 61 3 chr20 18738189 18738482 -53415400 + AluJo SINE Alu 1 310 -2 2080 272 103 81 chr20 18738482 18738631 -53415251 - L2 LINE L2 -1326 1987 1843 781 142 13 13 chr20 18738642 18738797 -53415085 + CT-rich Low_complexity Low_complexity 3 157 0 261 392 33 20 chr20 18739127 18739280 -53414602 + L2 LINE L2 3107 3261 -11 271 319 51 13 chr20 18739660 18739895 -53413987 - L1ME LINE L1 -246 5875 5632 2023 103 46 11 chr20 18739898 18740179 -53413703 + AluSx SINE Alu 6 296 -16 3482 161 40 23 chr20 18740227 18740428 -53413454 - L1MB2 LINE L1 -2 6169 5973 1678 158 0 0 chr20 18740428 18740682 -53413200 - AluJb SINE Alu -58 254 1 3482 161 40 23 chr20 18740682 18741188 -53412694 - L1MB2 LINE L1 -198 5973 5450 348 307 18 25 chr20 18741307 18741470 -53412412 - L1MB2 LINE L1 -736 5428 5267 1764 201 0 3 chr20 18741481 18741789 -53412093 - AluJb SINE Alu -5 307 1 2326 84 27 3 chr20 18741927 18742226 -53411656 - AluY SINE Alu -5 306 1 21 0 0 0 chr20 18743509 18743530 -53410352 + AT_rich Low_complexity Low_complexity 1 21 0 2359 93 0 7 chr20 18743718 18744028 -53409854 + AluSg SINE Alu 1 308 -2 21 36 0 0 chr20 18744619 18744647 -53409235 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr20 18745131 18745160 -53408722 + AT_rich Low_complexity Low_complexity 1 29 0 1694 185 26 6 chr20 18745412 18745758 -53408124 - MLT1A1 LTR MaLR -12 353 1 24 0 0 0 chr20 18745809 18745833 -53408049 + AT_rich Low_complexity Low_complexity 1 24 0 1031 69 0 0 chr20 18746150 18746280 -53407602 + AluSg SINE Alu 1 130 -180 2171 195 31 7 chr20 18746984 18747440 -53406442 - MLT1C LTR MaLR 0 467 1 2552 256 22 16 chr20 18747649 18748581 -53405301 - L1M4 LINE L1 -2136 4010 3073 2406 92 3 9 chr20 18750729 18751044 -53402838 - AluSq SINE Alu 0 313 1 28 0 0 0 chr20 18751260 18751288 -53402594 + AT_rich Low_complexity Low_complexity 1 28 0 458 317 34 15 chr20 18751347 18751754 -53402128 - MLT1J1 LTR MaLR -1 445 4 640 321 28 14 chr20 18752307 18752525 -53401357 + MIR SINE MIR 25 245 -17 2144 111 0 0 chr20 18753915 18754195 -53399687 + AluSx SINE Alu 1 280 -32 195 42 0 0 chr20 18754198 18754222 -53399660 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3026 163 6 4 chr20 18754682 18755167 -53398715 + MER66B LTR ERV1 1 486 0 2184 116 10 0 chr20 18755765 18756066 -53397816 + AluSx SINE Alu 1 304 -8 1994 128 3 33 chr20 18756076 18756381 -53397501 + AluSx SINE Alu 1 296 -16 183 314 98 20 chr20 18756411 18756513 -53397369 - L2 LINE L2 -635 2679 2570 269 292 157 0 chr20 18757144 18757233 -53396649 + MIR SINE MIR 43 145 -117 251 186 68 51 chr20 18757798 18757857 -53396025 - MIR3 SINE MIR -15 193 134 411 204 88 41 chr20 18758587 18758734 -53395148 + MER112 DNA MER1_type 17 170 -90 231 362 103 21 chr20 18758806 18758968 -53394914 + MER5A DNA MER1_type 4 175 -3 1520 204 27 10 chr20 18759082 18759376 -53394506 - AluJb SINE Alu -13 299 1 821 274 58 4 chr20 18759447 18759673 -53394209 - MIR SINE MIR -10 252 15 195 204 0 0 chr20 18760763 18760812 -53393070 + (TG)n Simple_repeat Simple_repeat 2 50 0 1859 171 0 0 chr20 18761108 18761394 -53392488 + AluJo SINE Alu 1 286 -26 24 53 0 0 chr20 18762360 18762398 -53391484 + AT_rich Low_complexity Low_complexity 1 38 0 401 259 43 0 chr20 18764118 18764234 -53389648 + MIR SINE MIR 57 177 -85 236 254 62 72 chr20 18764256 18764449 -53389433 + L1MC4 LINE L1 7844 8034 -8 296 330 90 15 chr20 18764451 18764651 -53389231 - MLT1J LTR MaLR -264 247 33 497 323 135 33 chr20 18765344 18765673 -53388209 - L2 LINE L2 -1223 2091 1797 1899 152 0 10 chr20 18765673 18765970 -53387912 - AluJb SINE Alu -9 303 10 497 323 135 33 chr20 18765970 18766212 -53387670 - L2 LINE L2 -1517 1797 1462 183 42 0 0 chr20 18766312 18766336 -53387546 + (T)n Simple_repeat Simple_repeat 1 24 0 456 358 39 13 chr20 18766369 18766598 -53387284 - L3 LINE CR1 -683 894 660 184 265 72 72 chr20 18769746 18769829 -53384053 + MIR SINE MIR 32 114 -94 1571 267 85 35 chr20 18770794 18771333 -53382549 + L2 LINE L2 1971 2536 -778 218 175 0 0 chr20 18771493 18771533 -53382349 + G-rich Low_complexity Low_complexity 1 40 0 1817 152 76 0 chr20 18771882 18772172 -53381710 + AluSx SINE Alu 1 312 0 235 349 12 12 chr20 18773644 18773730 -53380152 + MIR SINE MIR 28 113 -95 216 0 0 0 chr20 18773867 18773891 -53379991 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2291 86 7 7 chr20 18773971 18774263 -53379619 + AluSc SINE Alu 1 292 -17 298 316 118 15 chr20 18776164 18776300 -53377582 - MIR3 SINE MIR -21 187 38 2099 245 96 7 chr20 18776797 18777409 -53376473 - MER21B LTR ERV1 -54 809 143 2488 54 0 3 chr20 18777584 18777882 -53376000 + AluY SINE Alu 2 298 -13 460 366 61 0 chr20 18778126 18778339 -53375543 + MIR SINE MIR 22 247 -15 742 147 16 0 chr20 18778357 18778486 -53375396 + FLAM_C SINE Alu 3 133 0 26 34 0 51 chr20 18778523 18778582 -53375300 + AT_rich Low_complexity Low_complexity 1 56 0 795 174 0 0 chr20 18778587 18778708 -53375174 + FLAM_A SINE Alu 1 121 -12 289 341 68 0 chr20 18778720 18778808 -53375074 - L2 LINE L2 -19 3294 3201 1649 186 102 16 chr20 18778868 18779240 -53374642 - LTR32 LTR ERVL 0 471 68 1824 147 13 45 chr20 18779415 18779729 -53374153 + AluJo SINE Alu 1 304 -8 2190 125 0 7 chr20 18780263 18780568 -53373314 - AluSg SINE Alu -6 304 2 783 171 0 0 chr20 18781101 18781224 -53372658 + AluJo SINE Alu 1 123 -179 816 134 0 0 chr20 18781233 18781352 -53372530 + AluJo SINE Alu 183 301 -11 757 239 33 47 chr20 18781597 18781810 -53372072 - MIR SINE MIR -44 218 9 182 347 198 0 chr20 18781882 18782003 -53371879 - L3 LINE CR1 -425 1152 1008 2161 142 3 0 chr20 18782208 18782517 -53371365 + AluSx SINE Alu 1 310 -2 507 298 73 5 chr20 18782604 18782809 -53371073 - LTR33 LTR ERVL -302 219 1 273 57 0 0 chr20 18782829 18782864 -53371018 + (CA)n Simple_repeat Simple_repeat 1 35 0 296 276 13 0 chr20 18782954 18783030 -53370852 - L3 LINE CR1 -770 807 731 253 276 81 86 chr20 18783031 18783205 -53370677 + MER5B DNA MER1_type 1 173 -5 758 274 141 21 chr20 18783667 18784043 -53369839 - L2 LINE L2 -9 3304 2884 498 250 113 6 chr20 18784279 18784439 -53369443 - MER69A DNA AcHobo 0 177 1 227 313 27 41 chr20 18784886 18785033 -53368849 + G-rich Low_complexity Low_complexity 5 149 0 4292 163 16 29 chr20 18785273 18786162 -53367720 - L1MA4 LINE L1 -35 6447 5571 1793 155 0 0 chr20 18786202 18786466 -53367416 + AluSq SINE Alu 1 264 -49 234 0 0 0 chr20 18786471 18786497 -53367385 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 5446 193 22 50 chr20 18786579 18787818 -53366064 - L1MA4 LINE L1 -772 5556 4386 1000 167 0 98 chr20 18787818 18788052 -53365830 + AluJb SINE Alu 87 297 -15 5446 193 22 50 chr20 18788052 18788982 -53364900 - L1MA4 LINE L1 -1942 4386 3432 2587 164 18 0 chr20 18788981 18789437 -53364445 - L1MA4 LINE L1 -4862 466 3 * 1443 206 6 48 chr20 18789486 18789802 -53364080 - AluJb SINE Alu -9 303 1 513 179 45 0 chr20 18790035 18790169 -53363713 + CT-rich Low_complexity Low_complexity 3 142 0 21 0 0 0 chr20 18791128 18791149 -53362733 + AT_rich Low_complexity Low_complexity 1 21 0 325 267 15 59 chr20 18791714 18791849 -53362033 - L1ME1 LINE L1 -62 6104 5976 211 135 0 39 chr20 18791878 18791930 -53361952 + (GAA)n Simple_repeat Simple_repeat 2 51 0 236 237 52 101 chr20 18792733 18792810 -53361072 + Charlie8 DNA MER1_type 67 146 -1271 1512 124 146 25 chr20 18792810 18793084 -53360798 - AluSg1 SINE Alu -2 307 1 236 237 52 101 chr20 18793084 18793259 -53360623 + Charlie8 DNA MER1_type 146 1405 -12 2082 122 31 0 chr20 18793629 18793916 -53359966 + AluSq SINE Alu 1 296 -17 499 345 61 4 chr20 18794992 18795238 -53358644 + MIR SINE MIR 1 260 -2 782 190 103 17 chr20 18795273 18795447 -53358435 - MER5A DNA MER1_type 0 189 1 217 129 0 0 chr20 18797404 18797435 -53356447 - L2 LINE L2 -25 3247 3217 305 367 44 0 chr20 18797520 18797678 -53356204 - MIR SINE MIR -51 211 47 673 276 10 25 chr20 18799072 18799271 -53354611 + MER117 DNA MER1_type 1 196 -1 2347 77 3 10 chr20 18800996 18801308 -53352574 - AluY SINE Alu -1 310 1 188 275 25 62 chr20 18802082 18802162 -53351720 + MIR SINE MIR 67 143 -119 318 150 61 0 chr20 18802171 18802460 -53351422 + (TA)n Simple_repeat Simple_repeat 1 306 0 191 126 74 0 chr20 18802483 18802578 -53351304 + (TA)n Simple_repeat Simple_repeat 1 102 0 335 120 78 0 chr20 18802595 18802762 -53351120 + (TA)n Simple_repeat Simple_repeat 1 180 0 232 159 45 23 chr20 18802768 18802856 -53351026 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 259 118 76 21 chr20 18802863 18803007 -53350875 + (TATAA)n Simple_repeat Simple_repeat 5 156 0 40 37 0 0 chr20 18803007 18803061 -53350821 + AT_rich Low_complexity Low_complexity 1 54 0 249 183 207 0 chr20 18804610 18804692 -53349190 + MER113 DNA MER1_type? 1 99 -422 232 67 0 0 chr20 18804807 18804837 -53349045 - U6 snRNA snRNA -77 30 1 404 268 46 0 chr20 18805246 18805399 -53348483 + MER117 DNA MER1_type 33 192 -5 284 29 0 0 chr20 18805666 18805701 -53348181 - MADE1 DNA Mariner 0 80 46 1072 169 27 0 chr20 18806452 18806636 -53347246 - MER5A DNA MER1_type 0 189 1 2168 112 7 0 chr20 18806837 18807133 -53346749 - AluSq SINE Alu -15 298 1 219 264 69 56 chr20 18807318 18807390 -53346492 + MER91C DNA MER1_type 36 108 -32 402 315 25 44 chr20 18808944 18809147 -53344735 - MIR3 SINE MIR -5 203 5 737 119 0 25 chr20 18809219 18809337 -53344545 - AluJb SINE Alu -3 309 195 350 135 0 0 chr20 18809363 18809415 -53344467 - AluJ/FLAM SINE Alu -245 57 6 732 194 14 33 chr20 18809469 18809680 -53344202 - L1MD3 LINE L1 -9 7986 7780 999 170 12 0 chr20 18809682 18809847 -53344035 - AluSg/x SINE Alu -11 299 133 545 203 58 7 chr20 18809869 18810007 -53343875 - L1MD3 LINE L1 -242 7753 7609 756 172 0 0 chr20 18810010 18810132 -53343750 - FRAM SINE Alu -20 156 35 205 49 0 49 chr20 18810139 18810180 -53343702 + (TA)n Simple_repeat Simple_repeat 1 39 0 339 65 0 0 chr20 18810214 18810260 -53343622 + (TC)n Simple_repeat Simple_repeat 2 47 0 311 196 22 29 chr20 18810337 18810475 -53343407 + CT-rich Low_complexity Low_complexity 1 137 0 2641 45 0 3 chr20 18811994 18812303 -53341579 + AluY SINE Alu 1 308 -3 2422 69 0 25 chr20 18813152 18813471 -53340411 - AluY SINE Alu 0 311 1 1128 249 72 25 chr20 18813974 18814014 -53339868 - L1ME3 LINE L1 -72 6090 6053 1633 182 0 0 chr20 18814014 18814278 -53339604 + AluJo SINE Alu 18 281 -31 1128 249 72 25 chr20 18814278 18814682 -53339200 - L1ME3 LINE L1 -109 6053 5625 496 199 73 52 chr20 18814727 18814883 -53338999 - L1ME3 LINE L1 -712 5458 5301 1896 99 102 7 chr20 18814883 18815167 -53338715 - AluSx SINE Alu -1 311 1 496 199 73 52 chr20 18815167 18815309 -53338573 - L1ME3 LINE L1 -869 5301 5164 263 296 28 37 chr20 18816115 18816223 -53337659 - MER5B DNA MER1_type -26 152 46 1042 164 16 6 chr20 18816285 18816468 -53337414 - MER5A DNA MER1_type -4 185 1 325 287 87 41 chr20 18816818 18817013 -53336869 + L1ME4a LINE L1 5872 6075 -46 369 0 0 0 chr20 18817065 18817106 -53336776 + (CA)n Simple_repeat Simple_repeat 2 42 0 1035 116 71 11 chr20 18817708 18818014 -53335868 - THE1C LTR MaLR 0 375 1 33 25 0 0 chr20 18818313 18818353 -53335529 + AT_rich Low_complexity Low_complexity 1 40 0 1070 224 143 0 chr20 18818382 18818619 -53335263 - AluSx SINE Alu -40 272 2 1249 130 87 154 chr20 18818699 18819069 -53334813 + MER2 DNA MER2_type 1 345 0 429 272 117 19 chr20 18819209 18819415 -53334467 - MLT1G1 LTR MaLR -9 533 308 * 2068 126 12 67 chr20 18819406 18819810 -53334072 - LTR9 LTR ERV1 -230 382 1 597 239 51 7 chr20 18819834 18820056 -53333826 - MLT1G1 LTR MaLR -314 235 8 207 160 40 20 chr20 18820063 18820113 -53333769 + CT-rich Low_complexity Low_complexity 1 51 0 227 318 151 0 chr20 18820704 18820830 -53333052 - MIR SINE MIR -50 212 68 2081 135 30 0 chr20 18820929 18821226 -53332656 - AluSx SINE Alu -6 306 1 223 316 73 52 chr20 18821414 18821550 -53332332 - L2 LINE L2 0 3272 3134 613 131 20 0 chr20 18821906 18822019 -53331863 - MSTC LTR MaLR -328 100 1 1044 153 4 121 chr20 18822669 18822917 -53330965 - MER20 DNA MER1_type 0 219 1 387 284 53 48 chr20 18823306 18823514 -53330368 - MIR SINE MIR -8 254 46 1545 235 58 29 chr20 18823862 18824343 -53329539 - MLT1D LTR MaLR -7 498 4 498 309 119 21 chr20 18824385 18824621 -53329261 + MIR SINE MIR 4 262 0 189 0 0 0 chr20 18825001 18825022 -53328860 + (T)n Simple_repeat Simple_repeat 1 21 0 351 0 0 0 chr20 18825166 18825205 -53328677 + (CA)n Simple_repeat Simple_repeat 2 40 0 520 229 60 18 chr20 18825239 18825405 -53328477 + MIR SINE MIR 76 248 -14 237 315 8 102 chr20 18826265 18826392 -53327490 + MIR3 SINE MIR 70 184 -24 417 35 87 17 chr20 18826553 18826668 -53327214 + (TA)n Simple_repeat Simple_repeat 1 123 0 1681 182 0 31 chr20 18826672 18826963 -53326919 - AluJo SINE Alu -30 282 1 339 356 31 19 chr20 18827505 18827665 -53326217 + MIR SINE MIR 20 181 -81 679 313 23 30 chr20 18827708 18827801 -53326081 - MIR SINE MIR 0 262 170 2243 162 40 38 chr20 18827801 18828228 -53325654 + MSTC LTR MaLR 1 428 0 679 313 23 30 chr20 18828228 18828396 -53325486 - MIR SINE MIR -92 170 3 359 356 94 36 chr20 18828498 18828725 -53325157 + L2 LINE L2 2477 2689 -583 441 54 0 0 chr20 18828725 18828781 -53325101 + (TG)n Simple_repeat Simple_repeat 2 57 0 359 356 94 36 chr20 18828781 18829105 -53324777 + L2 LINE L2 2689 3058 -214 282 206 0 0 chr20 18829116 18829179 -53324703 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 2114 140 73 15 chr20 18829196 18829538 -53324344 + THE1B LTR MaLR 3 364 0 11914 94 1 1 chr20 18829538 18831116 -53322766 + THE1B-int LTR MaLR 1 1579 -1 2063 122 78 20 chr20 18831117 18831461 -53322421 + THE1B LTR MaLR 1 364 0 213 143 24 0 chr20 18832047 18832089 -53321793 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 193 27 81 27 chr20 18833455 18833492 -53320390 + T-rich Low_complexity Low_complexity 2 40 0 639 200 0 0 chr20 18833531 18833641 -53320241 - FLAM_C SINE Alu -32 111 2 256 253 11 32 chr20 18834774 18834869 -53319013 + MARNA DNA Mariner 170 262 -324 464 281 106 0 chr20 18834922 18835082 -53318800 + MIR SINE MIR 86 262 0 1989 137 27 0 chr20 18835785 18836078 -53317804 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr20 18836534 18836556 -53317326 + AT_rich Low_complexity Low_complexity 1 22 0 33 43 0 0 chr20 18836586 18836633 -53317249 + AT_rich Low_complexity Low_complexity 1 47 0 3054 140 2 59 chr20 18837011 18837554 -53316328 - MER41E LTR ERV1 0 512 1 2428 93 0 0 chr20 18838205 18838515 -53315367 - AluSg SINE Alu 0 310 1 226 146 24 0 chr20 18839603 18839644 -53314238 + (TCCA)n Simple_repeat Simple_repeat 2 43 0 193 274 0 0 chr20 18839644 18839695 -53314187 - L2 LINE L2 0 3313 3263 222 318 0 35 chr20 18840477 18840562 -53313320 + L3b LINE CR1 1428 1509 -74 289 259 37 0 chr20 18841798 18841879 -53312003 + (CATA)n Simple_repeat Simple_repeat 3 86 0 409 279 74 35 chr20 18841993 18842222 -53311660 - LTR33 LTR ERVL -235 286 49 410 195 0 13 chr20 18842229 18842306 -53311576 + FLAM SINE Alu 54 129 -14 884 158 0 0 chr20 18842560 18842693 -53311189 + FLAM_C SINE Alu 1 133 0 775 188 0 0 chr20 18843097 18843235 -53310647 + FLAM_C SINE Alu 1 138 -5 21 0 0 0 chr20 18843235 18843256 -53310626 + AT_rich Low_complexity Low_complexity 1 21 0 686 248 88 8 chr20 18843349 18843712 -53310170 + L1M4 LINE L1 2799 3190 -2956 15943 137 115 36 chr20 18844127 18847080 -53306802 + L1M1 LINE L1 15 3232 -4333 1494 181 90 4 chr20 18847080 18847357 -53306525 + AluJo SINE Alu 1 301 -11 15943 137 115 36 chr20 18847357 18847540 -53306342 + L1M1 LINE L1 3232 3399 -4166 2875 13 0 0 chr20 18848045 18848363 -53305519 + AluYb8 SINE Alu 1 318 0 301 232 0 12 chr20 18848374 18848456 -53305426 + L1ME3A LINE L1 6073 6153 -17 25 51 0 0 chr20 18849209 18849248 -53304634 + AT_rich Low_complexity Low_complexity 1 39 0 1443 102 5 0 chr20 18849420 18849636 -53304246 - L1PB1 LINE L1 -2 6149 5933 345 47 0 0 chr20 18849649 18849692 -53304190 + (CA)n Simple_repeat Simple_repeat 1 43 0 3210 92 6 4 chr20 18849693 18850180 -53303702 - L1PB1 LINE L1 -372 5779 5292 272 261 0 0 chr20 18850324 18850393 -53303489 - Charlie8 DNA MER1_type -8 2409 2341 354 216 18 54 chr20 18850504 18850615 -53303267 - Charlie8 DNA MER1_type -2204 213 107 288 264 0 35 chr20 18851017 18851104 -53302778 - L2 LINE L2 -1 3312 3229 3135 171 42 23 chr20 18851235 18851926 -53301956 + LTR8A LTR ERV1 1 704 -23 369 0 0 0 chr20 18853845 18853886 -53299996 + (TG)n Simple_repeat Simple_repeat 2 42 0 2258 143 115 2 chr20 18853886 18854354 -53299528 + L1MA9 LINE L1 5788 6312 0 2456 85 0 0 chr20 18854786 18855093 -53298789 + AluY SINE Alu 1 307 -4 345 257 46 37 chr20 18855239 18855439 -53298443 - LTR33A LTR ERVL 0 523 353 182 347 13 0 chr20 18855646 18855721 -53298161 - L2 LINE L2 -2992 322 247 743 170 0 0 chr20 18855905 18856017 -53297865 + FLAM_C SINE Alu 4 115 -28 367 111 0 0 chr20 18856025 18856079 -53297803 - MLT1C LTR MaLR -379 88 35 23 0 0 0 chr20 18856084 18856107 -53297775 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr20 18857474 18857496 -53296386 + AT_rich Low_complexity Low_complexity 1 22 0 297 310 0 0 chr20 18858979 18859066 -53294816 + GA-rich Low_complexity Low_complexity 1 87 0 266 245 47 28 chr20 18859707 18859813 -53294069 + MLT1K LTR MaLR 470 577 -11 361 188 65 65 chr20 18860842 18860980 -53292902 + MLT1K LTR MaLR 158 295 -293 1502 251 60 10 chr20 18861110 18861509 -53292373 + LTR16A LTR ERVL 32 450 0 1284 162 8 8 chr20 18864101 18864336 -53289546 + MSTB LTR MaLR 1 235 -191 2577 104 3 0 chr20 18864336 18864690 -53289192 - THE1A LTR MaLR 0 355 1 11779 91 9 1 chr20 18864692 18866257 -53287625 - THE1A-int LTR MaLR -2 1578 1 299 98 0 20 chr20 18866257 18866308 -53287574 - MLT2A1 LTR ERVL 0 453 404 183 42 0 0 chr20 18866308 18866332 -53287550 + (GA)n Simple_repeat Simple_repeat 2 25 0 1494 51 37 9 chr20 18866368 18866584 -53287298 - MLT2A1 LTR ERVL -222 222 1 1015 172 25 10 chr20 18866584 18866777 -53287105 + MSTB LTR MaLR 231 426 0 1368 204 25 48 chr20 18867459 18867851 -53286031 - MER58D DNA MER1_type -3 383 1 533 102 0 51 chr20 18868178 18868237 -53285645 + L1MC2 LINE L1 5865 5919 -425 1943 168 12 9 chr20 18868237 18868583 -53285299 - MER7A DNA MER2_type 0 346 2 533 102 0 51 chr20 18868583 18868621 -53285261 + L1MC2 LINE L1 5919 5957 -387 308 308 0 11 chr20 18868630 18868721 -53285161 + L1MC4 LINE L1 6614 6703 -1339 296 284 17 0 chr20 18868736 18868852 -53285030 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 287 384 0 0 chr20 18868852 18868964 -53284918 + (CATATA)n Simple_repeat Simple_repeat 1 112 0 280 259 15 30 chr20 18868990 18869125 -53284757 + (TATATG)n Simple_repeat Simple_repeat 2 134 0 336 256 26 34 chr20 18869126 18869243 -53284639 - L1MC4 LINE L1 -1313 6729 6614 702 119 0 0 chr20 18869262 18869363 -53284519 - U6 snRNA snRNA -6 101 1 1763 144 88 3 chr20 18869365 18869718 -53284164 + L1MC2 LINE L1 5953 6335 -9 742 164 42 1 chr20 18870382 18870555 -53283327 - L1MC2 LINE L1 -237 6107 5951 724 108 0 0 chr20 18870555 18870657 -53283225 + U6 snRNA snRNA 1 102 -5 198 103 0 0 chr20 18870663 18870692 -53283190 + (TA)n Simple_repeat Simple_repeat 1 29 0 2443 110 49 0 chr20 18871193 18871539 -53282343 - THE1B LTR MaLR -1 363 1 283 250 38 0 chr20 18871612 18871692 -53282190 + MIR SINE MIR 123 205 -57 231 294 118 17 chr20 18871900 18872019 -53281863 - MIR SINE MIR -13 249 119 305 156 0 16 chr20 18872046 18872110 -53281772 + GA-rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr20 18872227 18872256 -53281626 + AT_rich Low_complexity Low_complexity 1 29 0 35 0 0 0 chr20 18872302 18872337 -53281545 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr20 18872901 18872924 -53280958 + AT_rich Low_complexity Low_complexity 1 23 0 845 129 65 129 chr20 18873348 18873580 -53280302 - MER20 DNA MER1_type -1 218 2 44 0 0 0 chr20 18874194 18874238 -53279644 + AT_rich Low_complexity Low_complexity 1 44 0 383 298 107 8 chr20 18875134 18875235 -53278647 + MIR SINE MIR 32 148 -114 210 71 0 0 chr20 18875235 18875263 -53278619 + (TGG)n Simple_repeat Simple_repeat 3 30 0 383 298 107 8 chr20 18875263 18875282 -53278600 + MIR SINE MIR 148 164 -98 800 81 52 37 chr20 18875301 18875437 -53278445 + FLAM_C SINE Alu 6 143 0 1660 287 89 7 chr20 18875459 18876066 -53277816 - MER115 DNA AcHobo -4 689 33 193 318 0 30 chr20 18876117 18876183 -53277699 + MIR SINE MIR 199 262 0 * 489 346 63 63 chr20 18876178 18876623 -53277259 - L2 LINE L2 -21 3251 2807 277 321 7 58 chr20 18876873 18877010 -53276872 + L2 LINE L2 2954 3083 -189 797 208 67 11 chr20 18877081 18877259 -53276623 - MER5A DNA MER1_type -1 188 1 292 250 0 29 chr20 18877467 18877535 -53276347 + L2 LINE L2 3201 3266 -6 1770 119 36 0 chr20 18877552 18877803 -53276079 + AluSc SINE Alu 40 299 -10 446 304 58 0 chr20 18877829 18877967 -53275915 + LTR16C LTR ERVL 51 196 -295 631 169 99 63 chr20 18877967 18878109 -53275773 + AluJo SINE Alu 86 232 -80 469 274 45 6 chr20 18878113 18878270 -53275612 + LTR16C LTR ERVL 211 373 -118 303 28 0 0 chr20 18878356 18878392 -53275490 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 6838 178 77 9 chr20 18878554 18880125 -53273757 - MER52A LTR ERV1 0 1755 1 3597 144 16 2 chr20 18880345 18880958 -53272924 + L1MB4 LINE L1 5559 6180 0 293 310 41 18 chr20 18882562 18882733 -53271149 - L1ME LINE L1 -365 5756 5582 1721 176 0 31 chr20 18882815 18883134 -53270748 + AluJb SINE Alu 1 309 -3 861 207 21 27 chr20 18884057 18884245 -53269637 + MER5A DNA MER1_type 3 189 0 46 99 0 0 chr20 18884577 18884728 -53269154 + AT_rich Low_complexity Low_complexity 1 151 0 277 215 141 136 chr20 18885394 18885530 -53268352 + MIR SINE MIR 32 171 -91 1343 149 20 8 chr20 18885530 18885785 -53268097 + L1MA6 LINE L1 6039 6296 -4 277 215 141 136 chr20 18885785 18885839 -53268043 + MIR SINE MIR 171 223 -39 1867 208 44 10 chr20 18886679 18887284 -53266598 - MER39 LTR ERV1 0 707 1 1706 76 0 0 chr20 18887825 18888036 -53265846 + AluY SINE Alu 89 299 -12 1652 142 50 43 chr20 18889161 18889443 -53264439 - AluJo SINE Alu -24 288 5 21 0 0 0 chr20 18889449 18889470 -53264412 + AT_rich Low_complexity Low_complexity 1 21 0 328 249 11 90 chr20 18890929 18891118 -53262764 + Charlie8 DNA MER1_type 92 265 -2152 2147 192 59 84 chr20 18891412 18892069 -53261813 - MER21B LTR ERV1 -222 641 1 576 253 42 21 chr20 18892158 18892348 -53261534 + LTR33 LTR ERVL 1 194 -327 492 274 60 0 chr20 18892397 18892565 -53261317 + LTR33 LTR ERVL 342 519 -2 21 0 0 0 chr20 18892594 18892615 -53261267 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 18892834 18892857 -53261025 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 225 0 0 0 chr20 18893423 18893448 -53260434 + (T)n Simple_repeat Simple_repeat 1 25 0 24 32 0 0 chr20 18893875 18893906 -53259976 + AT_rich Low_complexity Low_complexity 1 31 0 558 256 14 76 chr20 18895540 18895685 -53258197 + MLT1I LTR MaLR 201 329 -80 1846 145 3 56 chr20 18895685 18896009 -53257873 + AluSx SINE Alu 1 307 -5 558 256 14 76 chr20 18896009 18896086 -53257796 + MLT1I LTR MaLR 329 409 0 283 259 63 70 chr20 18896086 18896244 -53257638 + MIR SINE MIR 48 204 -58 310 215 0 0 chr20 18896298 18896363 -53257519 - U3 snRNA snRNA -152 65 1 200 196 0 20 chr20 18896983 18897034 -53256848 + GA-rich Low_complexity Low_complexity 6 55 0 295 281 76 22 chr20 18897047 18897232 -53256650 - Charlie8 DNA MER1_type -2156 261 67 2364 102 0 0 chr20 18897369 18897673 -53256209 + AluSx SINE Alu 1 304 -8 873 81 0 24 chr20 18898237 18898360 -53255522 - AluY SINE Alu -4 307 188 549 0 0 0 chr20 18899042 18899103 -53254779 + (TG)n Simple_repeat Simple_repeat 2 62 0 1320 230 3 13 chr20 18899136 18899449 -53254433 - MLT2C1 LTR ERVL -87 310 1 2199 94 7 13 chr20 18899456 18899754 -53254128 - AluSc SINE Alu -13 296 1 14693 138 18 5 chr20 18899992 18902379 -53251503 + Tigger1 DNA MER2_type 1 2418 0 1101 147 6 0 chr20 18902487 18902650 -53251232 - AluSg/x SINE Alu -12 300 137 2376 103 0 0 chr20 18902650 18902951 -53250931 - AluSq SINE Alu -10 303 3 291 299 51 36 chr20 18903028 18903165 -53250717 + MIR3 SINE MIR 36 174 -34 2305 80 31 0 chr20 18903501 18903790 -53250092 - AluSx SINE Alu -14 298 1 451 294 35 0 chr20 18904127 18904270 -53249612 + MLT1J LTR MaLR 96 243 -268 943 153 27 6 chr20 18906095 18906278 -53247604 - MER53 DNA DNA 0 189 3 211 200 0 0 chr20 18906644 18906684 -53247198 + L2 LINE L2 3268 3307 -6 2083 117 47 3 chr20 18906819 18907118 -53246764 + AluSx SINE Alu 1 312 0 1286 235 75 5 chr20 18907878 18908359 -53245523 + MLT2E LTR ERVL 21 581 -47 887 259 41 13 chr20 18908977 18909322 -53244560 + LTR16C LTR ERVL 100 487 -4 672 209 37 27 chr20 18909962 18910149 -53243733 + MER53 DNA DNA 1 189 0 561 272 0 0 chr20 18910349 18910474 -53243408 - L2 LINE L2 0 3313 3189 262 316 10 41 chr20 18911678 18911776 -53242106 - MIR3 SINE MIR -46 162 68 2493 56 3 0 chr20 18913077 18913381 -53240501 + AluY SINE Alu 1 305 -6 2335 95 0 13 chr20 18913821 18914137 -53239745 - AluSx SINE Alu 0 312 1 275 247 13 13 chr20 18914147 18914224 -53239658 - MLT1H LTR MaLR -341 208 132 2135 120 0 7 chr20 18914301 18914601 -53239281 + AluSx SINE Alu 1 298 -14 2164 116 0 0 chr20 18915026 18915353 -53238529 - AluSx SINE Alu 0 327 1 2262 168 68 2 chr20 18916113 18916513 -53237369 + MSTB LTR MaLR 1 426 0 8553 161 36 25 chr20 18916513 18918145 -53235737 + MSTB-int LTR MaLR 1 1651 0 2056 182 76 2 chr20 18918145 18918541 -53235341 + MSTB LTR MaLR 1 425 -1 274 291 162 0 chr20 18919063 18919180 -53234702 + L2 LINE L2 3122 3257 -15 1671 219 64 5 chr20 18920517 18920891 -53232991 + MSTD LTR MaLR 1 396 0 396 0 0 0 chr20 18921170 18921214 -53232668 + (CA)n Simple_repeat Simple_repeat 2 45 0 1643 172 30 56 chr20 18921818 18922516 -53231366 + MER21B LTR ERV1 89 845 -18 276 287 19 9 chr20 18923108 18923216 -53230666 - MLT1L LTR MaLR -25 590 482 271 254 16 63 chr20 18923360 18923486 -53230396 - MLT1L LTR MaLR -348 267 148 409 316 75 7 chr20 18923770 18924185 -53229697 - L1ME4a LINE L1 -136 5985 5543 224 155 0 17 chr20 18924541 18924599 -53229283 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 1558 152 5 0 chr20 18926425 18926649 -53227233 - AluSq SINE Alu -88 225 1 2644 309 170 26 chr20 18926651 18927819 -53226063 + L2 LINE L2 333 1331 -1983 414 0 0 0 chr20 18927819 18927865 -53226017 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2644 309 170 26 chr20 18927865 18928576 -53225306 + L2 LINE L2 1331 2483 -831 258 206 14 27 chr20 18928611 18928684 -53225198 + L2 LINE L2 2468 2539 -775 367 314 19 9 chr20 18928693 18928798 -53225084 + L2 LINE L2 3168 3273 -40 1171 176 24 8 chr20 18928833 18929083 -53224799 + MER58B DNA MER1_type 73 326 -15 397 350 75 59 chr20 18929136 18929390 -53224492 - MLT1K LTR MaLR -298 290 33 207 0 0 0 chr20 18930227 18930250 -53223632 + (T)n Simple_repeat Simple_repeat 1 23 0 636 237 47 24 chr20 18930862 18931031 -53222851 - MLT2E LTR ERVL -437 191 19 2179 114 7 7 chr20 18931763 18932071 -53221811 - AluSq SINE Alu -5 308 1 280 242 42 100 chr20 18932133 18932253 -53221629 + MLT1I LTR MaLR 278 390 -19 2862 206 52 11 chr20 18932546 18933270 -53220612 + L1M4 LINE L1 4563 5316 -830 446 0 19 0 chr20 18933562 18933616 -53220266 + (CA)n Simple_repeat Simple_repeat 2 56 0 549 215 23 154 chr20 18933638 18933852 -53220030 + MER5A DNA MER1_type 4 189 0 291 322 81 31 chr20 18934396 18934609 -53219273 + MIR SINE MIR 20 241 -21 306 200 21 21 chr20 18934748 18934843 -53219039 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 359 297 22 66 chr20 18934914 18935325 -53218557 + L1MC4a LINE L1 4645 5037 -1109 508 344 45 25 chr20 18935580 18936051 -53217831 + L1MC4a LINE L1 5352 5831 -1977 499 14 14 14 chr20 18936086 18936155 -53217727 + (TA)n Simple_repeat Simple_repeat 2 70 0 557 326 93 46 chr20 18938544 18939004 -53214878 + LTR16C LTR ERVL 8 489 -2 100 55 0 0 chr20 18940029 18940192 -53213690 + AT_rich Low_complexity Low_complexity 1 163 0 355 224 58 96 chr20 18941327 18941483 -53212399 + MER103 DNA DNA 16 165 -1 308 270 230 0 chr20 18941514 18941686 -53212196 - MIR SINE MIR -10 252 42 207 132 19 57 chr20 18942277 18942330 -53211552 + T-rich Low_complexity Low_complexity 2 52 0 340 266 23 39 chr20 18942591 18942719 -53211163 + MIR SINE MIR 20 145 -63 2556 65 3 0 chr20 18942768 18943078 -53210804 - AluY SINE Alu 0 311 1 2345 71 0 0 chr20 18943194 18943520 -53210362 - AluY SINE Alu 0 326 1 282 29 0 0 chr20 18943561 18943596 -53210286 + (TG)n Simple_repeat Simple_repeat 2 36 0 299 105 18 0 chr20 18944149 18944206 -53209676 + (TA)n Simple_repeat Simple_repeat 2 59 0 2019 146 0 13 chr20 18944207 18944509 -53209373 - AluSx SINE Alu -8 304 7 2262 116 0 0 chr20 18944512 18944813 -53209069 - AluSx SINE Alu -9 303 3 721 261 23 40 chr20 18945819 18945995 -53207887 + MER45A DNA AcHobo 6 178 0 389 350 118 24 chr20 18946286 18946575 -53207307 - L2 LINE L2 -38 3234 2919 1543 185 5 93 chr20 18946902 18947312 -53206570 + MLT1A2 LTR MaLR 1 374 0 1516 160 57 143 chr20 18947316 18947790 -53206092 + MLT1A2-int LTR MaLR 5 437 -934 752 126 0 25 chr20 18947794 18947913 -53205969 - FLAM_C SINE Alu 0 143 28 454 217 0 0 chr20 18947988 18948071 -53205811 + Tigger5 DNA MER2_type 2237 2319 -4 473 274 136 16 chr20 18949740 18950152 -53203730 + L1ME1 LINE L1 5188 5651 -511 415 242 116 56 chr20 18950205 18950420 -53203462 - MER112 DNA MER1_type -31 229 2 327 290 51 37 chr20 18950457 18950671 -53203211 + L1ME1 LINE L1 5706 5922 -244 23 33 0 0 chr20 18950709 18950739 -53203143 + AT_rich Low_complexity Low_complexity 1 30 0 336 239 316 0 chr20 18950852 18950969 -53202913 - MLT1L LTR MaLR -58 557 404 490 320 140 22 chr20 18951290 18951655 -53202227 - L2 LINE L2 -58 3255 2848 203 271 21 42 chr20 18951708 18951804 -53202078 - L2 LINE L2 -705 2609 2516 948 284 192 23 chr20 18952786 18953265 -53200617 - MLT1K LTR MaLR -10 578 19 238 316 149 0 chr20 18953466 18953580 -53200302 - MIR SINE MIR -52 210 80 819 192 9 58 chr20 18953584 18953808 -53200074 + L1MA7 LINE L1 6068 6280 -11 191 330 33 22 chr20 18954421 18954512 -53199370 + L2 LINE L2 3214 3305 -8 210 158 0 0 chr20 18955685 18955723 -53198159 + T-rich Low_complexity Low_complexity 1 38 0 528 241 135 55 chr20 18955747 18955984 -53197898 + MIR SINE MIR 2 257 -5 293 364 60 24 chr20 18956244 18956494 -53197388 + L2 LINE L2 2525 2783 -531 374 304 13 9 chr20 18956543 18956668 -53197214 - MIR SINE MIR -72 136 8 900 224 41 18 chr20 18956688 18956907 -53196975 + MER58A DNA MER1_type 1 224 0 619 249 29 17 chr20 18958607 18958780 -53195102 - MIR SINE MIR -3 259 85 2133 121 3 0 chr20 18958867 18959173 -53194709 - AluSg SINE Alu -3 307 1 262 342 145 20 chr20 18960170 18960322 -53193560 - MIR SINE MIR -74 188 18 1295 168 43 12 chr20 18960332 18960654 -53193228 - L1MB3 LINE L1 -10 6173 5862 336 24 0 0 chr20 18960654 18960695 -53193187 + (TG)n Simple_repeat Simple_repeat 2 42 0 1295 168 43 12 chr20 18960695 18960936 -53192946 - L1MB3 LINE L1 -321 5862 5544 333 0 0 0 chr20 18961467 18961504 -53192378 + (TG)n Simple_repeat Simple_repeat 1 37 0 1479 263 142 17 chr20 18961945 18962424 -53191458 + MLT1E LTR MaLR 55 593 0 303 248 20 30 chr20 18962766 18962867 -53191015 + LTR67 LTR ERVL 458 557 0 1667 163 33 20 chr20 18962926 18963227 -53190655 - AluJb SINE Alu -7 305 1 2288 171 4 42 chr20 18963875 18964064 -53189818 + Tigger2a DNA MER2_type 1 196 -2512 2145 110 0 10 chr20 18964064 18964355 -53189527 + AluSp SINE Alu 1 288 -25 2288 171 4 42 chr20 18964355 18964616 -53189266 + Tigger2a DNA MER2_type 196 434 0 2206 112 0 0 chr20 18965900 18966194 -53187688 - AluSc SINE Alu -15 294 1 247 264 0 0 chr20 18967965 18968018 -53185864 + (TG)n Simple_repeat Simple_repeat 1 53 0 2255 115 0 3 chr20 18968933 18969245 -53184637 + AluSq SINE Alu 1 311 -2 420 238 107 0 chr20 18970703 18970825 -53183057 - MER3 DNA MER1_type 0 209 75 290 345 74 19 chr20 18970817 18971071 -53182811 + MLT1K LTR MaLR 220 514 -101 1307 197 51 3 chr20 18971071 18971385 -53182497 + MER33 DNA MER1_type 1 321 -3 380 245 10 10 chr20 18971393 18971491 -53182391 + MLT1K LTR MaLR 490 587 -1 25 65 0 0 chr20 18972363 18972409 -53181473 + AT_rich Low_complexity Low_complexity 1 46 0 22 70 0 0 chr20 18972795 18972838 -53181044 + AT_rich Low_complexity Low_complexity 1 43 0 198 103 0 0 chr20 18973151 18973180 -53180702 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 339 218 35 0 chr20 18973290 18973377 -53180505 - MER97a DNA MER1_type? -16 878 789 3241 192 39 28 chr20 18973389 18974103 -53179779 - L1MB7 LINE L1 -17 6167 5446 1051 252 116 7 chr20 18974103 18974535 -53179347 - MER97c DNA MER1_type? -117 777 299 960 239 24 0 chr20 18974567 18974780 -53179102 - MER97c DNA MER1_type? -863 227 10 1670 242 69 63 chr20 18975062 18975600 -53178282 - MLT1F LTR MaLR 0 542 2 221 83 28 0 chr20 18977944 18977980 -53175902 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 297 51 0 0 chr20 18979050 18979089 -53174793 + MADE1 DNA Mariner 42 80 0 257 267 82 7 chr20 18979195 18979341 -53174541 + HAL1b LINE L1 667 823 -525 319 350 58 39 chr20 18979650 18980061 -53173821 + L1ME LINE L1 2200 2618 -3528 229 320 89 0 chr20 18980190 18980393 -53173489 + L1ME LINE L1 2708 2928 -3218 248 348 97 22 chr20 18980458 18980777 -53173105 + L1ME LINE L1 4674 5016 -1130 344 279 35 75 chr20 18981305 18981506 -53172376 + L1ME LINE L1 5582 5774 -347 2317 67 13 0 chr20 18981609 18981908 -53171974 - AluY SINE Alu -8 303 1 541 56 0 0 chr20 18981945 18982016 -53171866 + Alu SINE Alu 1 71 -240 22080 26 5 0 chr20 18982016 18985426 -53168456 + L1PA3 LINE L1 2734 6155 0 226 237 34 0 chr20 18987853 18987912 -53165970 - MER94 DNA DNA 0 134 74 254 228 0 119 chr20 18988719 18988921 -53164961 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 233 331 6 25 chr20 18988935 18989098 -53164784 + (CATATA)n Simple_repeat Simple_repeat 5 164 0 328 354 55 30 chr20 18989771 18989935 -53163947 + L2 LINE L2 3100 3267 -5 7195 45 6 6 chr20 18990218 18991297 -53162585 - L1PA5 LINE L1 -3 6151 5073 1370 87 41 27 chr20 18991553 18991772 -53162110 + MER30 DNA MER1_type 2 223 -7 23 0 0 0 chr20 18991828 18991851 -53162031 + AT_rich Low_complexity Low_complexity 1 23 0 576 167 42 0 chr20 18991859 18991955 -53161927 - AluJ/FLAM SINE Alu -212 100 1 28 0 0 0 chr20 18992106 18992134 -53161748 + AT_rich Low_complexity Low_complexity 1 28 0 277 149 43 43 chr20 18992540 18992634 -53161248 + (CTATA)n Simple_repeat Simple_repeat 2 95 0 41 36 0 0 chr20 18993446 18993501 -53160381 + AT_rich Low_complexity Low_complexity 1 55 0 25 51 0 0 chr20 18993716 18993755 -53160127 + AT_rich Low_complexity Low_complexity 1 39 0 2021 74 282 6 chr20 18995398 18995749 -53158133 - LTR7 LTR ERV1 -2 448 1 2291 92 45 18 chr20 18995749 18996129 -53157753 - HERVH LTR ERV1 0 7713 7324 1230 157 19 0 chr20 18996129 18996345 -53157537 - HERVH LTR ERV1 -1894 5819 5600 4037 151 0 1 chr20 18996346 18997009 -53156873 - HERVH LTR ERV1 -2564 5149 4488 5985 82 1 2 chr20 18997011 18997866 -53156016 - HERVH LTR ERV1 -3720 3993 3140 * 19234 95 14 18 chr20 18997845 19000853 -53153029 - HERVH LTR ERV1 -4718 2995 1 1984 86 282 6 chr20 19000855 19001206 -53152676 - LTR7 LTR ERV1 -2 448 1 1034 243 43 27 chr20 19001300 19001629 -53152253 + L1ME3A LINE L1 5836 6169 -1 1657 203 25 11 chr20 19002178 19002538 -53151344 - MLT1A1 LTR MaLR 0 365 1 186 315 0 0 chr20 19002635 19002689 -53151193 + MIR SINE MIR 13 66 -196 411 318 104 65 chr20 19003025 19003428 -53150454 + L2 LINE L2 2811 3229 -43 1198 196 43 97 chr20 19004775 19005167 -53148715 - MLT1A2 LTR MaLR 0 374 4 738 264 254 3 chr20 19005386 19005720 -53148162 + LTR33 LTR ERVL 76 493 -28 241 280 13 0 chr20 19005965 19006040 -53147842 + (TAA)n Simple_repeat Simple_repeat 1 76 0 283 296 31 43 chr20 19006058 19006220 -53147662 - MIR SINE MIR -50 212 53 180 269 0 39 chr20 19007400 19007452 -53146430 - L2 LINE L2 -95 3218 3169 201 156 0 0 chr20 19007458 19007490 -53146392 + (CA)n Simple_repeat Simple_repeat 1 32 0 450 274 126 6 chr20 19008774 19008949 -53144933 + MIR SINE MIR 53 248 -14 31 26 0 0 chr20 19009028 19009066 -53144816 + AT_rich Low_complexity Low_complexity 1 38 0 212 130 22 0 chr20 19009069 19009115 -53144767 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 377 268 91 129 chr20 19009787 19010291 -53143591 + L1MEd LINE L1 114 598 -5607 303 333 24 16 chr20 19010377 19010500 -53143382 + L1MEd LINE L1 1567 1690 -4706 311 267 45 102 chr20 19010863 19011039 -53142843 + L1MEd LINE L1 2181 2346 -4050 405 340 67 8 chr20 19011081 19011319 -53142563 + L1MEd LINE L1 2554 2805 -3410 538 243 107 63 chr20 19011319 19011525 -53142357 + MER58C DNA MER1_type 1 215 0 659 259 15 41 chr20 19011566 19011763 -53142119 - L2 LINE L2 -6 3307 3116 1108 189 112 40 chr20 19011814 19012136 -53141746 - MER2 DNA MER2_type 0 345 1 305 262 90 83 chr20 19012243 19012317 -53141565 + L1MEd LINE L1 3077 3149 -3066 1735 179 7 17 chr20 19012317 19012614 -53141268 + AluJo SINE Alu 1 294 -18 305 262 90 83 chr20 19012614 19012829 -53141053 + L1MEd LINE L1 3149 3368 -2847 2086 145 0 0 chr20 19012877 19013167 -53140715 + AluSx SINE Alu 1 290 -22 238 277 107 55 chr20 19013179 19013489 -53140393 + L1MEd LINE L1 3439 3764 -2451 22 56 0 0 chr20 19013506 19013542 -53140340 + AT_rich Low_complexity Low_complexity 1 36 0 1106 203 78 17 chr20 19013613 19013908 -53139974 + L1MB7 LINE L1 5809 6121 -63 1408 200 52 14 chr20 19013913 19014258 -53139624 + MLT1A1 LTR MaLR 6 363 -2 243 293 71 25 chr20 19014278 19014476 -53139406 + L1MEd LINE L1 3944 4150 -2065 336 112 118 33 chr20 19014540 19014692 -53139190 + (TTTAA)n Simple_repeat Simple_repeat 1 165 0 22 35 0 0 chr20 19014697 19014726 -53139156 + AT_rich Low_complexity Low_complexity 1 29 0 340 301 82 14 chr20 19014743 19014889 -53138993 + L1MEd LINE L1 4273 4428 -1787 329 324 35 52 chr20 19015884 19016057 -53137825 + MIR3 SINE MIR 5 174 -34 441 0 0 0 chr20 19016145 19016194 -53137688 + (TG)n Simple_repeat Simple_repeat 2 50 0 2857 152 11 11 chr20 19016236 19016404 -53137478 + L1MB3 LINE L1 5657 5824 -359 795 196 0 0 chr20 19016404 19016537 -53137345 + FLAM_A SINE Alu 1 133 0 2857 152 11 11 chr20 19016537 19016894 -53136988 + L1MB3 LINE L1 5823 6182 -1 591 274 110 13 chr20 19017929 19018445 -53135437 - MLT2E LTR ERVL 0 628 7 401 295 6 38 chr20 19018925 19019157 -53134725 + CT-rich Low_complexity Low_complexity 1 224 0 202 56 56 0 chr20 19019316 19019352 -53134530 + CT-rich Low_complexity Low_complexity 1 38 0 575 304 46 36 chr20 19019364 19019667 -53134215 + L2 LINE L2 3008 3313 0 200 97 32 0 chr20 19019667 19019698 -53134184 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1160 196 128 4 chr20 19020108 19020257 -53133625 - AluJo SINE Alu -3 299 170 215 77 0 26 chr20 19020257 19020296 -53133586 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 1160 196 128 4 chr20 19020296 19020411 -53133471 - AluJo SINE Alu -132 170 2 21 0 0 0 chr20 19020704 19020725 -53133157 + AT_rich Low_complexity Low_complexity 1 21 0 231 133 0 0 chr20 19020742 19020787 -53133095 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 56 0 0 chr20 19020827 19020863 -53133019 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 19021848 19021883 -53131999 + AT_rich Low_complexity Low_complexity 1 35 0 4349 18 0 2 chr20 19022079 19022754 -53131128 - L1PA3 LINE L1 -373 5782 5109 3337 31 0 0 chr20 19022754 19023143 -53130739 + L1PA3 LINE L1 5763 6153 -2 6614 176 109 27 chr20 19023434 19024977 -53128905 + MER52A LTR ERV1 1 1755 0 322 262 38 90 chr20 19025744 19026011 -53127871 - MLT1K LTR MaLR -5 583 331 243 281 73 24 chr20 19026124 19026206 -53127676 - MIR SINE MIR -153 109 24 483 224 83 26 chr20 19026808 19026964 -53126918 + L1ME3 LINE L1 5969 6133 -29 1833 164 38 53 chr20 19027551 19027947 -53125935 - MLT1B LTR MaLR 0 390 1 291 266 13 0 chr20 19028240 19028319 -53125563 + L2 LINE L2 2897 2976 -337 679 116 0 0 chr20 19028399 19028494 -53125388 - AluS SINE Alu -217 95 1 686 208 94 0 chr20 19028746 19028905 -53124977 + MER8 DNA MER2_type 1 174 -65 366 133 13 40 chr20 19028941 19029016 -53124866 - Tigger2a DNA MER2_type -361 73 1 1091 172 235 8 chr20 19030957 19031072 -53122810 + AluJo SINE Alu 2 90 -212 216 0 0 0 chr20 19031072 19031096 -53122786 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 1091 172 235 8 chr20 19031096 19031218 -53122664 + AluJo SINE Alu 90 293 -9 477 295 76 19 chr20 19032090 19032452 -53121430 - MLT1J2 LTR MaLR 0 450 43 182 367 133 0 chr20 19032541 19032669 -53121213 - L2 LINE L2 -1 3271 3127 25 51 0 0 chr20 19033300 19033339 -53120543 + AT_rich Low_complexity Low_complexity 1 39 0 278 344 99 0 chr20 19034131 19034262 -53119620 + L2 LINE L2 3161 3304 -9 1097 257 41 28 chr20 19034323 19034782 -53119100 + Charlie4a DNA MER1_type 12 476 -32 231 288 9 69 chr20 19034855 19034971 -53118911 + MIR SINE MIR 31 140 -68 184 171 73 0 chr20 19034942 19034983 -53118899 + L3 LINE CR1 1531 1574 -3 * 558 344 0 5 chr20 19036654 19036843 -53117039 + MLT1I LTR MaLR 7 194 -215 242 122 0 41 chr20 19037025 19037074 -53116808 + (TATG)n Simple_repeat Simple_repeat 3 49 0 595 264 190 48 chr20 19038212 19038256 -53115626 - LTR16C LTR ERVL -8 483 447 2040 231 89 8 chr20 19038256 19038772 -53115110 - MER74A LTR ERVL 0 558 1 595 264 190 48 chr20 19038772 19039064 -53114818 - LTR16C LTR ERVL -44 447 99 230 258 21 0 chr20 19039608 19039701 -53114181 + (TA)n Simple_repeat Simple_repeat 2 96 0 462 18 0 0 chr20 19039713 19039768 -53114114 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 249 322 0 23 chr20 19039828 19039915 -53113967 + CT-rich Low_complexity Low_complexity 5 89 0 222 200 0 50 chr20 19040835 19040895 -53112987 + CT-rich Low_complexity Low_complexity 3 59 0 1404 177 23 34 chr20 19041102 19041368 -53112514 + AluJo SINE Alu 39 301 -11 2370 108 0 0 chr20 19041667 19041974 -53111908 + AluSx SINE Alu 1 307 -5 1131 218 100 50 chr20 19042145 19042644 -53111238 - L1MC4 LINE L1 -1 8041 7518 6094 102 12 12 chr20 19042675 19043969 -53109913 + L1PA11 LINE L1 4879 6172 -2 704 235 43 28 chr20 19043987 19044242 -53109640 - LTR37B LTR ERV1 -12 456 198 21 36 0 0 chr20 19045013 19045041 -53108841 + AT_rich Low_complexity Low_complexity 1 28 0 1604 171 0 0 chr20 19045394 19045657 -53108225 - AluJb SINE Alu 0 306 44 2163 115 3 0 chr20 19045664 19045950 -53107932 - AluSg SINE Alu -11 299 13 22 56 0 0 chr20 19046259 19046295 -53107587 + AT_rich Low_complexity Low_complexity 1 36 0 218 308 22 22 chr20 19046344 19046435 -53107447 - MIR SINE MIR -62 200 110 301 250 0 0 chr20 19046607 19046663 -53107219 + L2 LINE L2 3215 3270 -2 212 391 69 25 chr20 19046694 19046896 -53106986 + L2 LINE L2 2658 2868 -446 2574 194 20 14 chr20 19047502 19047543 -53106339 - MLT2B2 LTR ERVL -8 507 468 468 99 0 0 chr20 19047543 19047614 -53106268 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 2574 194 20 14 chr20 19047614 19048071 -53105811 - MLT2B2 LTR ERVL -47 468 6 570 276 81 42 chr20 19048079 19048362 -53105520 + MLT1K LTR MaLR 295 588 0 505 264 66 74 chr20 19049782 19050040 -53103842 + L2 LINE L2 3043 3298 -15 944 226 31 86 chr20 19050919 19051409 -53102473 - LTR37B LTR ERV1 -5 463 1 248 222 123 25 chr20 19051606 19051687 -53102195 - MIR SINE MIR -108 154 66 342 290 0 69 chr20 19052000 19052131 -53101751 + L1MC5 LINE L1 7298 7419 -542 552 217 104 51 chr20 19052300 19052636 -53101246 + L1MC5 LINE L1 7560 7913 -48 2337 109 3 0 chr20 19052727 19053063 -53100819 - AluSq SINE Alu 0 313 1 1990 140 32 24 chr20 19053232 19053604 -53100278 + THE1C LTR MaLR 1 375 0 10522 103 21 35 chr20 19053604 19055206 -53098676 + THE1C-int LTR MaLR 1 1580 0 1950 153 26 34 chr20 19055206 19055584 -53098298 + THE1C LTR MaLR 1 375 0 551 155 0 0 chr20 19055586 19055670 -53098212 + 5S rRNA rRNA 7 90 -31 28 29 0 0 chr20 19056105 19056140 -53097742 + AT_rich Low_complexity Low_complexity 1 35 0 253 263 147 11 chr20 19056428 19056523 -53097359 - L2 LINE L2 -1 3312 3205 296 292 0 0 chr20 19056623 19056695 -53097187 + MIR SINE MIR 181 252 -10 186 293 20 61 chr20 19057915 19058014 -53095868 - MIR SINE MIR -132 130 36 204 220 0 60 chr20 19058623 19058673 -53095209 + polypyrimidine Low_complexity Low_complexity 3 49 0 222 234 0 0 chr20 19058676 19058723 -53095159 - MIR SINE MIR -139 123 77 679 172 185 0 chr20 19058803 19058954 -53094928 + MER5A DNA MER1_type 11 189 0 419 259 75 26 chr20 19059150 19059481 -53094401 + MLT1L LTR MaLR 224 614 -1 2446 76 0 0 chr20 19060031 19060335 -53093547 - AluY SINE Alu -7 304 1 243 306 118 69 chr20 19061017 19061161 -53092721 + L2 LINE L2 2683 2833 -481 199 279 0 0 chr20 19061156 19061199 -53092683 + MER5B DNA MER1_type 7 49 -129 * 214 49 24 24 chr20 19061199 19061240 -53092642 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 209 214 54 107 chr20 19061254 19061366 -53092516 - MER5B DNA MER1_type -45 133 28 447 310 81 101 chr20 19061374 19061819 -53092063 + L2 LINE L2 2836 3271 -1 449 329 83 9 chr20 19062456 19062684 -53091198 - MIR SINE MIR 0 262 18 2904 87 27 40 chr20 19062966 19063416 -53090466 - MLT2A1 LTR ERVL 0 444 1 271 299 80 0 chr20 19064804 19064983 -53088899 - L2 LINE L2 -2 3311 3160 1995 179 20 6 chr20 19065006 19065364 -53088518 + MLT1A1 LTR MaLR 1 363 -2 346 225 0 0 chr20 19065381 19065461 -53088421 - MER69 DNA AcHobo -7 2519 2440 1315 235 134 0 chr20 19065884 19066279 -53087603 - L1MD2 LINE L1 -227 6132 5685 272 246 0 0 chr20 19066301 19066362 -53087520 - MER69 DNA AcHobo -2465 61 1 24 32 0 0 chr20 19066556 19066587 -53087295 + AT_rich Low_complexity Low_complexity 1 31 0 228 229 0 0 chr20 19067635 19067683 -53086199 + (TTCA)n Simple_repeat Simple_repeat 4 51 0 2080 95 7 14 chr20 19067798 19068083 -53085799 - AluSg1 SINE Alu -26 283 1 1420 155 10 51 chr20 19068406 19068749 -53085133 - MER61B LTR ERV1 0 425 1 377 262 77 104 chr20 19068974 19069272 -53084610 - L2 LINE L2 -13 3259 2970 603 332 66 27 chr20 19069579 19069913 -53083969 - L2 LINE L2 -372 2942 2596 828 206 298 63 chr20 19071462 19072103 -53081779 + LTR48 LTR ERV1 1 591 -4 6809 133 24 7 chr20 19072439 19074548 -53079334 + L1MA3 LINE L1 4167 6305 0 3798 172 41 15 chr20 19075654 19076466 -53077416 + L1MA3 LINE L1 5473 6305 0 246 192 0 0 chr20 19076483 19076535 -53077347 + (CATTC)n Simple_repeat Simple_repeat 1 52 0 180 0 0 0 chr20 19077251 19077271 -53076611 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1095 218 66 83 chr20 19077272 19077740 -53076142 + LTR37B LTR ERV1 9 468 0 5592 134 90 11 chr20 19077763 19078109 -53075773 - Tigger3b DNA MER2_type -1800 1228 910 212 0 36 0 chr20 19078109 19078137 -53075745 + (TGAG)n Simple_repeat Simple_repeat 2 30 0 5592 134 90 11 chr20 19078137 19078917 -53074965 - Tigger3b DNA MER2_type -2118 910 14 220 257 14 57 chr20 19079004 19079074 -53074808 + L2 LINE L2 3234 3300 -13 1626 255 53 0 chr20 19080633 19081084 -53072798 + MER110 LTR ERV1 10 484 -7 225 0 0 0 chr20 19081499 19081524 -53072358 + (A)n Simple_repeat Simple_repeat 1 25 0 333 380 12 24 chr20 19081594 19081760 -53072122 + MIR SINE MIR 23 186 -76 422 327 57 1 chr20 19081865 19082033 -53071849 - MIR SINE MIR -62 146 25 588 219 39 0 chr20 19083092 19083220 -53070662 - MER58B DNA MER1_type 0 341 209 450 279 43 17 chr20 19083191 19083480 -53070402 + MLT2E LTR ERVL 273 628 0 * 224 282 175 19 chr20 19083689 19083792 -53070090 + MIR SINE MIR 32 150 -58 813 259 122 31 chr20 19083834 19084155 -53069727 + MLT1I LTR MaLR 60 409 0 21 0 0 0 chr20 19084813 19084834 -53069048 + AT_rich Low_complexity Low_complexity 1 21 0 537 340 194 17 chr20 19085526 19085820 -53068062 - L2 LINE L2 -3 3269 2924 1504 270 38 10 chr20 19086417 19086920 -53066962 - MER119 DNA MER1_type -64 519 3 849 252 22 45 chr20 19087284 19087597 -53066285 + LTR16C LTR ERVL 186 491 0 359 296 93 69 chr20 19087753 19088172 -53065710 - L2 LINE L2 -951 2363 1935 2212 122 0 0 chr20 19088456 19088751 -53065131 + AluSx SINE Alu 1 295 -17 2886 169 85 29 chr20 19089246 19089904 -53063978 - L1MB7 LINE L1 -19 6165 5471 252 100 0 0 chr20 19090154 19090194 -53063688 + (CA)n Simple_repeat Simple_repeat 1 40 0 1892 159 50 0 chr20 19090580 19090900 -53062982 - MER47A DNA MER2_type -2 364 29 1766 216 14 31 chr20 19092151 19092505 -53061377 + MER63 DNA MER1_type 641 988 -73 2441 60 0 35 chr20 19092505 19092820 -53061062 - AluY SINE Alu -7 304 1 1766 216 14 31 chr20 19092820 19092882 -53061000 + MER63 DNA MER1_type 988 1050 -11 204 40 0 0 chr20 19092916 19092941 -53060941 + (TG)n Simple_repeat Simple_repeat 2 26 0 1256 316 43 7 chr20 19093220 19093638 -53060244 + LTR16A LTR ERVL 16 448 -2 906 239 93 30 chr20 19093843 19094144 -53059738 + L1M4 LINE L1 3552 3871 -2275 1137 240 10 38 chr20 19094160 19094473 -53059409 - L1MC4a LINE L1 -295 7513 7210 286 289 247 0 chr20 19095129 19095226 -53058656 + L2 LINE L2 3189 3309 -4 251 283 11 22 chr20 19095238 19095330 -53058552 - MIR SINE MIR -35 227 137 303 190 0 0 chr20 19095367 19095425 -53058457 - L1MC5 LINE L1 -48 7913 7856 1490 217 11 27 chr20 19095430 19095803 -53058079 - MLT1A2 LTR MaLR -4 370 4 807 169 76 47 chr20 19095860 19096032 -53057850 - FRAM SINE Alu 0 176 1 22 0 0 0 chr20 19097147 19097169 -53056713 + AT_rich Low_complexity Low_complexity 1 22 0 411 261 9 0 chr20 19098335 19098446 -53055436 - MER20B DNA MER1_type -5 778 667 1028 277 67 26 chr20 19098534 19098920 -53054962 + LTR16C LTR ERVL 90 491 0 1460 257 141 8 chr20 19098920 19099515 -53054367 - MER20B DNA MER1_type -109 674 1 317 248 179 0 chr20 19099852 19099969 -53053913 + MIR SINE MIR 125 262 0 2759 22 0 3 chr20 19102122 19102434 -53051448 + AluY SINE Alu 1 311 0 303 49 0 0 chr20 19102443 19102484 -53051398 + (TA)n Simple_repeat Simple_repeat 2 42 0 253 270 40 14 chr20 19103965 19104039 -53049843 - MIR SINE MIR -123 139 64 261 180 0 0 chr20 19104355 19104405 -53049477 + GA-rich Low_complexity Low_complexity 3 52 0 2259 108 0 7 chr20 19107667 19107973 -53045909 + AluSc SINE Alu 2 305 -4 234 0 0 0 chr20 19108604 19108630 -53045252 + (A)n Simple_repeat Simple_repeat 1 26 0 338 227 27 18 chr20 19108652 19108762 -53045120 + MER103 DNA DNA 54 164 -2 245 98 24 0 chr20 19109060 19109101 -53044781 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 258 294 42 56 chr20 19109534 19109677 -53044205 + MIR3 SINE MIR 38 178 -30 384 298 75 25 chr20 19110178 19110339 -53043543 + MIR3 SINE MIR 17 185 -23 1024 280 94 57 chr20 19110450 19111077 -53042805 + L1MC4a LINE L1 5523 5657 -497 23 33 0 0 chr20 19111292 19111322 -53042560 + AT_rich Low_complexity Low_complexity 1 30 0 2126 120 0 47 chr20 19111474 19111791 -53042091 - AluSx SINE Alu -10 302 1 351 245 86 58 chr20 19112013 19112152 -53041730 + MARNA DNA Mariner 441 583 -3 986 264 70 51 chr20 19112171 19112691 -53041191 - MLT1G LTR MaLR -6 549 10 213 208 0 21 chr20 19115548 19115596 -53038286 - L2 LINE L2 -2 3311 3265 241 277 24 24 chr20 19115876 19115959 -53037923 + L3 LINE CR1 1375 1457 -120 24 0 0 85 chr20 19117007 19117054 -53036828 + AT_rich Low_complexity Low_complexity 1 43 0 2216 63 0 4 chr20 19117396 19117664 -53036218 - AluY SINE Alu -18 293 27 350 269 161 20 chr20 19119003 19119152 -53034730 + MIR SINE MIR 70 239 -23 229 284 11 11 chr20 19119539 19119627 -53034255 - L2 LINE L2 -141 3172 3085 22 0 0 0 chr20 19119907 19119929 -53033953 + AT_rich Low_complexity Low_complexity 1 22 0 1744 86 8 0 chr20 19120105 19120362 -53033520 - L1MA2 LINE L1 0 6304 6046 375 287 36 101 chr20 19120386 19120773 -53033109 - HAL1 LINE L1 -1183 1324 963 21 71 0 0 chr20 19120859 19120901 -53032981 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr20 19121156 19121201 -53032681 + (CA)n Simple_repeat Simple_repeat 2 46 0 695 136 0 0 chr20 19121900 19122031 -53031851 - FLAM_C SINE Alu 0 148 18 601 229 0 7 chr20 19122413 19122553 -53031329 + FLAM_C SINE Alu 5 143 0 724 200 5 93 chr20 19123453 19123658 -53030224 - MER5A DNA MER1_type 0 189 3 21 0 0 0 chr20 19124103 19124124 -53029758 + AT_rich Low_complexity Low_complexity 1 21 0 1896 154 46 0 chr20 19124296 19124641 -53029241 + L1MB7 LINE L1 5353 5713 -471 2348 162 19 19 chr20 19124642 19125062 -53028820 - MSTB LTR MaLR -6 420 1 2175 180 24 7 chr20 19125062 19125485 -53028397 + L1MB7 LINE L1 5704 6133 -51 2048 143 138 5 chr20 19125486 19125864 -53028018 - MSTA LTR MaLR 0 428 1 201 154 0 0 chr20 19125884 19125923 -53027959 + A-rich Low_complexity Low_complexity 1 39 0 233 179 0 0 chr20 19126943 19126982 -53026900 - MIR SINE MIR -15 247 209 5358 219 84 58 chr20 19127050 19127305 -53026577 + L1MDa LINE L1 9 256 -6284 297 0 0 0 chr20 19127305 19127338 -53026544 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 261 0 0 0 chr20 19127337 19127366 -53026516 + (CCA)n Simple_repeat Simple_repeat 3 31 0 * 5358 219 84 58 chr20 19127338 19128713 -53025169 + L1MDa LINE L1 256 1793 -4747 2195 115 0 3 chr20 19128713 19129017 -53024865 + AluSg SINE Alu 1 303 -7 5358 219 84 58 chr20 19129017 19129324 -53024558 + L1MDa LINE L1 1793 2091 -4449 871 192 107 122 chr20 19129322 19129418 -53024464 + L1ME2 LINE L1 5758 5854 -310 * 2869 13 0 0 chr20 19129418 19129732 -53024150 + AluYb8 SINE Alu 1 314 -4 871 192 107 122 chr20 19129732 19130046 -53023836 + L1ME2 LINE L1 5854 6162 -2 452 270 17 0 chr20 19130523 19130638 -53023244 + MLT1G1 LTR MaLR 1 117 -478 217 226 19 38 chr20 19131233 19131286 -53022596 + MIR SINE MIR 44 95 -167 484 277 122 64 chr20 19133406 19133702 -53020180 + MLT1J LTR MaLR 1 313 -198 1878 279 24 2 chr20 19134516 19134985 -53018897 + Zaphod DNA AcHobo 119 597 -3434 478 196 11 0 chr20 19134996 19135088 -53018794 + MER115 DNA AcHobo 593 685 -8 213 192 0 50 chr20 19135165 19135228 -53018654 - MIR SINE MIR -63 145 106 560 285 25 13 chr20 19135361 19135519 -53018363 + MER5A DNA MER1_type 9 168 -21 458 195 213 6 chr20 19135548 19135693 -53018189 + MER5A DNA MER1_type 4 183 -6 522 290 51 23 chr20 19136869 19137045 -53016837 - MIR SINE MIR 0 262 82 1589 178 56 7 chr20 19137079 19137365 -53016517 - AluJb SINE Alu -12 300 1 440 302 103 30 chr20 19137612 19138039 -53015843 + L1ME4a LINE L1 5590 6047 -74 327 113 0 65 chr20 19138142 19138204 -53015678 + Alu SINE Alu 1 51 -248 204 214 0 0 chr20 19138518 19138560 -53015322 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 25 51 0 0 chr20 19139291 19139330 -53014552 + AT_rich Low_complexity Low_complexity 1 39 0 799 158 0 8 chr20 19139745 19139878 -53014004 - FLAM_A SINE Alu -1 132 1 515 87 0 0 chr20 19140169 19140238 -53013644 - THE1C LTR MaLR -304 71 3 193 282 87 48 chr20 19140284 19140387 -53013495 + MIR SINE MIR 16 122 -86 551 325 123 20 chr20 19140623 19140915 -53012967 - L3 LINE CR1 -17 1560 1239 442 242 60 71 chr20 19141441 19141539 -53012343 + Charlie8 DNA MER1_type 15 112 -229 2309 92 0 10 chr20 19141539 19141845 -53012037 + AluSq SINE Alu 1 303 -10 442 242 60 71 chr20 19141845 19141928 -53011954 + Charlie8 DNA MER1_type 112 194 -147 229 205 61 0 chr20 19142568 19142634 -53011248 + L1MC/D LINE L1 5384 5456 -727 2467 122 8 3 chr20 19142667 19143029 -53010853 + THE1B LTR MaLR 1 364 0 674 206 161 62 chr20 19143179 19143299 -53010583 + L1MC5 LINE L1 7084 7191 -770 345 47 0 0 chr20 19143299 19143342 -53010540 + (CA)n Simple_repeat Simple_repeat 1 43 0 674 206 161 62 chr20 19143342 19143434 -53010448 + L1MC5 LINE L1 7191 7272 -689 2847 124 28 2 chr20 19143434 19143871 -53010011 + MER83 LTR ERV1 1 448 0 674 206 161 62 chr20 19143871 19144060 -53009822 + L1MC5 LINE L1 7272 7526 -435 21 0 0 0 chr20 19145584 19145605 -53008277 + AT_rich Low_complexity Low_complexity 1 21 0 401 305 70 32 chr20 19145790 19145977 -53007905 + MIR SINE MIR 16 209 -53 677 314 57 13 chr20 19146469 19146698 -53007184 - MIR SINE MIR -3 259 21 342 288 144 45 chr20 19147721 19147943 -53005939 - L3 LINE CR1 -431 1146 903 667 222 48 0 chr20 19147990 19148157 -53005725 - MER5B DNA MER1_type -3 175 1 518 218 241 0 chr20 19148172 19148305 -53005577 + MER5A DNA MER1_type 10 174 -15 673 180 23 8 chr20 19149304 19149432 -53004450 - FLAM_C SINE Alu 0 133 4 617 243 183 70 chr20 19150051 19150065 -53003817 - L1MC4a LINE L1 -1842 5966 5955 255 61 0 0 chr20 19150065 19150098 -53003784 + (CA)n Simple_repeat Simple_repeat 2 34 0 617 243 183 70 chr20 19150098 19150499 -53003383 - L1MC4a LINE L1 -1853 5955 5504 247 246 0 7 chr20 19150532 19150611 -53003271 - L1MC4a LINE L1 -741 5423 5347 287 298 265 7 chr20 19150611 19150762 -53003120 + MIR SINE MIR 73 262 0 185 346 156 17 chr20 19151221 19151568 -53002314 + L2 LINE L2 2563 2957 -357 22 0 0 0 chr20 19151854 19151876 -53002006 + AT_rich Low_complexity Low_complexity 1 22 0 621 301 55 34 chr20 19151982 19152180 -53001702 + MER102b DNA MER1_type 5 214 -1214 2558 173 24 18 chr20 19152180 19152690 -53001192 + LTR10D LTR ERV1 1 513 0 621 301 55 34 chr20 19152690 19152817 -53001065 + MER102b DNA MER1_type 214 337 -4 215 222 48 0 chr20 19152821 19152884 -53000998 + MIR SINE MIR 72 137 -71 423 300 0 40 chr20 19153578 19153801 -53000081 - L1MC4a LINE L1 -1869 5939 5726 568 267 140 36 chr20 19154048 19154269 -52999613 - MIR SINE MIR -2 260 17 1203 169 106 33 chr20 19154508 19154872 -52999010 - MSTB LTR MaLR -2 428 1 2602 203 25 102 chr20 19155052 19155997 -52997885 - L1MC4 LINE L1 0 8042 7170 430 349 165 34 chr20 19157296 19157648 -52996234 - L2 LINE L2 -5 3267 2870 473 325 53 22 chr20 19157674 19157902 -52995980 + MIR SINE MIR 2 236 -26 26 0 0 0 chr20 19157903 19157929 -52995953 + AT_rich Low_complexity Low_complexity 1 26 0 196 68 23 45 chr20 19158968 19159012 -52994870 + (CAAAAA)n Simple_repeat Simple_repeat 1 43 0 3514 139 7 0 chr20 19159100 19159654 -52994228 + L1PA16 LINE L1 5606 6163 -3 235 194 16 32 chr20 19159874 19159936 -52993946 + L1MC4a LINE L1 5629 5689 -2119 * 619 171 93 102 chr20 19159918 19160251 -52993631 + L1MC5 LINE L1 7586 7915 -46 317 288 25 75 chr20 19160265 19160425 -52993457 + L1MC4a LINE L1 5880 6031 -1777 219 186 0 0 chr20 19160523 19160566 -52993316 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 273 298 11 0 chr20 19160655 19160749 -52993133 + (TATG)n Simple_repeat Simple_repeat 1 95 0 2528 59 0 3 chr20 19160928 19161232 -52992650 + AluY SINE Alu 1 303 -8 23 54 0 0 chr20 19161551 19161588 -52992294 + AT_rich Low_complexity Low_complexity 1 37 0 434 312 19 0 chr20 19161828 19161982 -52991900 + L1MB5 LINE L1 2 158 -6384 769 204 0 0 chr20 19162015 19162147 -52991735 + AluJo SINE Alu 4 135 -177 844 289 57 41 chr20 19162302 19162721 -52991161 + L1MB5 LINE L1 359 784 -5758 6686 217 38 82 chr20 19162729 19165124 -52988758 + L1MB5 LINE L1 1349 3581 -3063 1021 247 167 46 chr20 19165124 19165160 -52988722 - MLT2B1 LTR ERVL -1 519 489 539 73 0 12 chr20 19165160 19165242 -52988640 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1021 247 167 46 chr20 19165242 19165666 -52988216 - MLT2B1 LTR ERVL -31 489 3 6686 217 38 82 chr20 19165666 19167148 -52986734 + L1MB5 LINE L1 3581 5126 -1518 2891 176 69 38 chr20 19167156 19167652 -52986230 + L1MB5 LINE L1 5951 6477 -195 2029 100 21 0 chr20 19167652 19167931 -52985951 + AluSx SINE Alu 23 307 -5 2891 176 69 38 chr20 19167931 19168127 -52985755 + L1MB5 LINE L1 6477 6665 -7 551 279 79 16 chr20 19168470 19168660 -52985222 - MLT1J2 LTR MaLR -225 225 24 2248 109 0 3 chr20 19169491 19169794 -52984088 - AluSc SINE Alu -7 302 1 203 321 113 28 chr20 19170634 19170740 -52983142 + MIR SINE MIR 33 147 -61 23 0 0 0 chr20 19174139 19174162 -52979720 + AT_rich Low_complexity Low_complexity 1 23 0 996 269 58 52 chr20 19174640 19175057 -52978825 - MER39 LTR ERV1 0 707 73 2532 98 45 3 chr20 19175057 19175415 -52978467 - THE1C LTR MaLR -2 373 1 996 269 58 52 chr20 19175415 19175489 -52978393 - MER39 LTR ERV1 -634 73 1 767 273 92 51 chr20 19175558 19176184 -52977698 - L2 LINE L2 -5 3308 2659 488 245 97 97 chr20 19176447 19176786 -52977096 + L1ME4a LINE L1 5571 5909 -212 735 167 0 38 chr20 19177159 19177291 -52976591 + FLAM_C SINE Alu 1 127 -16 322 194 0 45 chr20 19177449 19177516 -52976366 + MER5A DNA MER1_type 53 116 -73 960 212 129 62 chr20 19177528 19177980 -52975902 + MER39 LTR ERV1 5 707 0 255 169 0 34 chr20 19177982 19178041 -52975841 + MER5A DNA MER1_type 133 189 0 21 71 0 0 chr20 19179218 19179260 -52974622 + AT_rich Low_complexity Low_complexity 1 42 0 181 169 34 34 chr20 19179475 19179534 -52974348 + (CATA)n Simple_repeat Simple_repeat 2 60 0 761 257 22 6 chr20 19180817 19181000 -52972882 + MER5A DNA MER1_type 1 186 -3 552 276 29 11 chr20 19181261 19181435 -52972447 + MIR SINE MIR 25 201 -61 294 289 105 0 chr20 19182100 19182214 -52971668 + MIR SINE MIR 6 131 -131 222 91 0 0 chr20 19183446 19183479 -52970403 + (CA)n Simple_repeat Simple_repeat 2 34 0 272 121 182 15 chr20 19184889 19184955 -52968927 - MER95 LTR ERV -2 429 353 1078 142 41 23 chr20 19185187 19185406 -52968476 - L1MA8 LINE L1 -6 6285 6063 1395 222 36 17 chr20 19185409 19185770 -52968112 - MER95 LTR ERV -59 372 5 778 252 49 24 chr20 19186245 19186491 -52967391 - MIR SINE MIR -4 258 7 200 143 24 0 chr20 19186859 19186901 -52966981 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2427 91 0 0 chr20 19187781 19188139 -52965743 - AluSg1 SINE Alu 0 358 1 696 101 0 0 chr20 19188566 19188655 -52965227 - FLAM SINE Alu -17 126 38 34 42 0 0 chr20 19189026 19189074 -52964808 + AT_rich Low_complexity Low_complexity 1 48 0 1624 201 0 10 chr20 19189478 19189766 -52964116 + AluJo SINE Alu 7 291 -21 223 280 150 30 chr20 19191263 19191363 -52962519 - MIR SINE MIR -72 136 25 1460 208 40 30 chr20 19192577 19192947 -52960935 - MLT1A2 LTR MaLR 0 374 1 327 283 10 10 chr20 19192973 19193072 -52960810 - L2 LINE L2 -1 3312 3214 950 200 24 29 chr20 19193251 19193461 -52960421 + MER3 DNA MER1_type 1 209 0 23 0 0 0 chr20 19193805 19193828 -52960054 + AT_rich Low_complexity Low_complexity 1 23 0 554 209 0 35 chr20 19193828 19193943 -52959939 - FRAM SINE Alu -54 122 12 356 272 134 69 chr20 19195277 19195365 -52958517 + L2 LINE L2 3052 3133 -180 276 100 0 0 chr20 19195365 19195405 -52958477 + (TATAA)n Simple_repeat Simple_repeat 1 40 0 356 272 134 69 chr20 19195405 19195562 -52958320 + L2 LINE L2 3133 3313 0 673 285 45 77 chr20 19195678 19196120 -52957762 + MLT1J2 LTR MaLR 1 428 -22 2654 93 0 29 chr20 19196216 19196591 -52957291 - THE1B LTR MaLR 0 364 1 2153 112 0 3 chr20 19197178 19197473 -52956409 + AluSg SINE Alu 1 294 -16 198 0 0 0 chr20 19198637 19198659 -52955223 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 325 335 68 11 chr20 19198957 19199133 -52954749 + MIR SINE MIR 8 193 -69 782 287 50 4 chr20 19199135 19199393 -52954489 + MER77 LTR ERV1 329 598 -7 399 300 82 45 chr20 19200243 19200354 -52953528 + L1ME4a LINE L1 5411 5516 -605 9190 25 5 0 chr20 19200354 19202206 -52951676 + L1PA4 LINE L1 4289 6144 -11 399 300 82 45 chr20 19202206 19202581 -52951301 + L1ME4a LINE L1 5516 5915 -206 427 263 73 7 chr20 19202624 19202761 -52951121 - MIR SINE MIR -40 222 77 1828 252 75 68 chr20 19202796 19203526 -52950356 - MER21B LTR ERV1 -128 735 1 808 262 31 26 chr20 19203827 19204056 -52949826 + MIR SINE MIR 23 252 -10 1908 159 7 3 chr20 19204204 19204493 -52949389 + AluSx SINE Alu 1 290 -22 2535 58 0 6 chr20 19205499 19205811 -52948071 - AluY SINE Alu -1 310 1 1670 175 79 23 chr20 19206325 19206679 -52947203 - MLT1A2 LTR MaLR 0 374 1 220 149 64 0 chr20 19206832 19206879 -52947003 + (TTTAA)n Simple_repeat Simple_repeat 3 52 0 38 39 0 0 chr20 19207217 19207269 -52946613 + AT_rich Low_complexity Low_complexity 1 52 0 2267 228 114 11 chr20 19207428 19208121 -52945761 - L1MD2 LINE L1 0 6359 5604 4307 238 61 22 chr20 19208297 19209704 -52944178 - L1MD2 LINE L1 -613 5629 4130 2169 99 61 0 chr20 19209704 19209997 -52943885 - AluSx SINE Alu -1 311 1 4307 238 61 22 chr20 19209997 19210297 -52943585 - L1MD2 LINE L1 -2112 4130 3843 25 0 0 0 chr20 19210552 19210577 -52943305 + AT_rich Low_complexity Low_complexity 1 25 0 315 169 46 15 chr20 19210607 19210672 -52943210 + GA-rich Low_complexity Low_complexity 2 68 0 435 119 0 0 chr20 19210672 19210739 -52943143 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 22 0 0 0 chr20 19211717 19211739 -52942143 + AT_rich Low_complexity Low_complexity 1 22 0 2159 100 14 3 chr20 19213086 19213377 -52940505 + AluSg SINE Alu 1 294 -16 22 0 0 0 chr20 19213798 19213820 -52940062 + AT_rich Low_complexity Low_complexity 1 22 0 1510 161 33 50 chr20 19214255 19214554 -52939328 - AluJo SINE Alu -18 294 1 2358 88 0 0 chr20 19214733 19215028 -52938854 - AluSg SINE Alu -15 295 1 23 54 0 0 chr20 19215583 19215620 -52938262 + AT_rich Low_complexity Low_complexity 1 37 0 695 199 25 19 chr20 19215845 19216006 -52937876 + MER5A DNA MER1_type 1 162 -27 2219 106 0 3 chr20 19216164 19216465 -52937417 - AluSx SINE Alu -12 300 1 21 0 0 0 chr20 19218573 19218594 -52935288 + AT_rich Low_complexity Low_complexity 1 21 0 563 291 74 34 chr20 19219927 19220305 -52933577 - L1ME LINE L1 -512 5719 5327 21 36 0 0 chr20 19220377 19220405 -52933477 + AT_rich Low_complexity Low_complexity 1 28 0 1471 204 17 27 chr20 19220472 19220766 -52933116 + AluJo SINE Alu 1 291 -21 333 287 73 54 chr20 19220912 19221099 -52932783 - L1ME LINE L1 -1315 4900 4703 1680 199 7 0 chr20 19221099 19221405 -52932477 - AluJo SINE Alu -4 308 1 333 287 73 54 chr20 19221405 19221534 -52932348 - L1ME LINE L1 -1512 4703 4578 220 222 16 16 chr20 19221643 19221706 -52932176 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 269 241 138 0 chr20 19221713 19221800 -52932082 - L1ME LINE L1 -5045 1351 1253 279 239 23 11 chr20 19221854 19221942 -52931940 + (TA)n Simple_repeat Simple_repeat 1 89 0 216 235 0 0 chr20 19221969 19222037 -52931845 + (TA)n Simple_repeat Simple_repeat 1 68 0 348 303 5 128 chr20 19223392 19223603 -52930279 - MIR SINE MIR -18 244 60 477 346 78 6 chr20 19224371 19224558 -52929324 - MIR3 SINE MIR -2 206 4 2452 85 0 0 chr20 19224586 19224892 -52928990 - AluY SINE Alu -5 306 1 211 229 0 21 chr20 19225035 19225083 -52928799 + A-rich Low_complexity Low_complexity 3 49 0 2200 70 3 0 chr20 19225568 19225855 -52928027 + L1PA7 LINE L1 5866 6153 -1 198 167 0 0 chr20 19225986 19226022 -52927860 + GA-rich Low_complexity Low_complexity 3 38 0 348 209 0 0 chr20 19227021 19227088 -52926794 + MER116 DNA Mariner 14 80 0 972 318 46 44 chr20 19227088 19227655 -52926227 + L2 LINE L2 2282 2849 -465 499 289 71 40 chr20 19227721 19227946 -52925936 + L2 LINE L2 2942 3173 -140 2907 219 68 12 chr20 19228158 19228956 -52924926 - MER63C DNA MER1_type -88 842 1 1508 134 142 19 chr20 19229121 19229389 -52924493 + AluJb SINE Alu 1 301 -1 217 250 0 19 chr20 19230176 19230228 -52923654 + L2 LINE L2 3221 3271 -1 1294 139 0 29 chr20 19231973 19232181 -52921701 - AluSg/x SINE Alu -25 285 84 265 291 0 0 chr20 19232306 19232361 -52921521 - L2 LINE L2 -11 3261 3207 28 29 0 0 chr20 19232425 19232460 -52921422 + AT_rich Low_complexity Low_complexity 1 35 0 415 295 9 0 chr20 19234046 19234151 -52919731 - MIR3 SINE MIR -16 192 87 474 299 26 20 chr20 19235025 19235280 -52918602 + CT-rich Low_complexity Low_complexity 1 256 0 1583 144 11 49 chr20 19235441 19235726 -52918156 - AluJo SINE Alu -11 301 28 180 111 0 0 chr20 19235943 19235970 -52917912 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 707 211 39 6 chr20 19236154 19236334 -52917548 - MER53 DNA DNA -3 186 1 333 295 129 42 chr20 19236394 19236845 -52917037 - L2 LINE L2 -1022 2292 1803 447 90 75 0 chr20 19236881 19236948 -52916934 + MER53 DNA DNA 1 72 -117 243 213 0 49 chr20 19237038 19237099 -52916783 + GA-rich Low_complexity Low_complexity 1 58 0 822 257 115 7 chr20 19237146 19237442 -52916440 - MER46C DNA MER2_type -1 337 10 642 277 69 50 chr20 19237945 19238248 -52915634 + L2 LINE L2 2996 3304 -9 21 0 0 0 chr20 19240110 19240131 -52913751 + AT_rich Low_complexity Low_complexity 1 21 0 461 316 30 6 chr20 19240361 19240529 -52913353 + CT-rich Low_complexity Low_complexity 2 173 0 253 357 25 19 chr20 19241009 19241166 -52912716 + L2 LINE L2 2334 2491 -823 29 94 0 0 chr20 19243070 19243155 -52910727 + AT_rich Low_complexity Low_complexity 1 85 0 1023 162 5 46 chr20 19243157 19243354 -52910528 - MER58A DNA MER1_type 0 224 36 224 154 77 77 chr20 19243459 19243524 -52910358 + L3 LINE CR1 412 476 -1101 591 294 43 19 chr20 19243923 19244134 -52909748 - MIR SINE MIR -4 258 43 232 349 35 0 chr20 19244199 19244285 -52909597 - MIR3 SINE MIR -10 198 110 1887 139 13 25 chr20 19244983 19245299 -52908583 - AluJb SINE Alu 0 312 1 344 330 52 0 chr20 19245984 19246099 -52907783 - MIR SINE MIR -108 154 34 261 327 49 37 chr20 19246314 19246476 -52907406 - MLT1J LTR MaLR -94 417 254 255 61 0 0 chr20 19246504 19246537 -52907345 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 767 214 21 7 chr20 19246540 19246685 -52907197 - FRAM SINE Alu -30 146 1 180 269 125 39 chr20 19248016 19248120 -52905762 + L2 LINE L2 3000 3112 -160 2560 40 0 3 chr20 19248742 19249040 -52904842 - AluY SINE Alu -14 297 1 663 279 113 0 chr20 19249185 19249414 -52904468 + MIR SINE MIR 6 260 -2 25 0 0 0 chr20 19250114 19250139 -52903743 + AT_rich Low_complexity Low_complexity 1 25 0 2188 104 0 4 chr20 19250644 19250965 -52902917 - AluSq SINE Alu 0 325 6 294 125 0 0 chr20 19251112 19251160 -52902722 + (GGA)n Simple_repeat Simple_repeat 2 49 0 402 276 125 52 chr20 19251183 19251607 -52902275 + MLT1J LTR MaLR 5 459 -52 2155 151 49 36 chr20 19252577 19253022 -52900860 + L1MB7 LINE L1 5718 6168 -16 209 319 18 157 chr20 19253296 19253685 -52900197 + L2 LINE L2 2917 3251 -21 185 270 9 113 chr20 19253843 19253958 -52899924 - MIR SINE MIR -71 191 89 551 270 170 4 chr20 19254968 19255209 -52898673 + LTR16C LTR ERVL 209 489 -2 839 216 110 26 chr20 19255273 19255500 -52898382 + MIR SINE MIR 2 247 -15 616 256 0 15 chr20 19255516 19255653 -52898229 - MIR3 SINE MIR -6 202 68 530 248 89 9 chr20 19257258 19257472 -52896410 - LTR16C LTR ERVL -12 479 249 180 0 0 0 chr20 19258356 19258376 -52895506 + (CA)n Simple_repeat Simple_repeat 1 20 0 279 0 0 0 chr20 19258852 19258883 -52894999 + (CA)n Simple_repeat Simple_repeat 2 32 0 209 311 33 0 chr20 19261449 19261510 -52892372 + MER5A DNA MER1_type 69 131 -58 471 325 147 0 chr20 19261959 19262116 -52891766 + MER5A DNA MER1_type 9 188 -1 383 219 73 0 chr20 19262510 19262606 -52891276 + MER5A DNA MER1_type 4 106 -83 275 365 20 20 chr20 19262671 19262819 -52891063 + L3 LINE CR1 1414 1561 -16 212 188 16 0 chr20 19263427 19263491 -52890391 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 2368 48 7 3 chr20 19264325 19264619 -52889263 + AluY SINE Alu 1 295 -16 1832 169 3 28 chr20 19265011 19265331 -52888551 + AluJo SINE Alu 1 312 0 716 152 179 7 chr20 19265349 19265500 -52888382 + MER5A DNA MER1_type 12 188 -1 220 306 19 37 chr20 19265729 19265837 -52888045 + MIR3 SINE MIR 13 118 -90 413 291 134 36 chr20 19266721 19267078 -52886804 - LTR16C LTR ERVL 0 491 100 1280 238 17 17 chr20 19268507 19268797 -52885085 + AluJo SINE Alu 2 291 -21 1900 178 0 3 chr20 19268802 19269105 -52884777 + AluJo SINE Alu 5 306 -6 362 278 32 16 chr20 19269119 19269306 -52884576 + L1MC4a LINE L1 5708 5897 -1911 1087 264 137 40 chr20 19269388 19269942 -52883940 - L2 LINE L2 0 3313 2698 307 287 81 52 chr20 19270177 19270351 -52883531 + MIR SINE MIR 84 262 0 242 307 102 31 chr20 19270466 19270593 -52883289 - MIR3 SINE MIR -3 205 70 368 178 158 0 chr20 19270676 19270777 -52883105 + MER113 DNA MER1_type? 78 194 -327 1694 147 37 37 chr20 19271144 19271497 -52882385 - MLT1A1 LTR MaLR 0 365 13 244 260 14 0 chr20 19271508 19271523 -52882359 - MLT1H LTR MaLR -447 102 89 1575 174 19 40 chr20 19271523 19271896 -52881986 - MLT1A1 LTR MaLR 0 365 1 244 260 14 0 chr20 19271896 19271953 -52881929 - MLT1H LTR MaLR -460 89 29 1805 184 0 7 chr20 19272138 19272448 -52881434 + AluJo SINE Alu 1 308 -4 1963 228 66 30 chr20 19272459 19273169 -52880713 + HsTC2a DNA MER2_type 5 740 -4 1502 6 0 0 chr20 19273764 19273922 -52879960 + SVA Other Other 1227 1384 -2 1667 148 0 8 chr20 19274042 19274306 -52879576 - AluJb SINE Alu -8 304 43 264 143 0 0 chr20 19274684 19274740 -52879142 + (TC)n Simple_repeat Simple_repeat 2 57 0 1303 271 23 0 chr20 19275170 19275517 -52878365 - LTR16A LTR ERVL -15 435 81 1173 190 38 0 chr20 19275541 19275752 -52878130 + MER20 DNA MER1_type 1 219 0 3078 149 22 9 chr20 19276036 19276571 -52877311 + MER34 LTR ERV1 1 542 0 183 194 0 0 chr20 19277051 19277082 -52876800 - L2 LINE L2 -26 3287 3257 3234 128 43 59 chr20 19277484 19278115 -52875767 - L1PB4 LINE L1 -2 6154 5534 1025 196 65 14 chr20 19278356 19278632 -52875250 + MER63 DNA MER1_type 1 290 -640 1191 202 73 3 chr20 19278633 19278920 -52874962 + MER63 DNA MER1_type 733 1039 -21 5887 154 28 9 chr20 19280657 19282881 -52871001 + L1PB2 LINE L1 3890 6149 -2 691 261 19 48 chr20 19283090 19283368 -52870514 - L1M2 LINE L1 -532 5632 5378 2070 137 25 27 chr20 19283879 19284244 -52869638 - THE1B LTR MaLR 0 364 1 3330 113 8 2 chr20 19285209 19285704 -52868178 - L1PA14 LINE L1 -9 6152 5655 1111 127 42 0 chr20 19285705 19285870 -52868012 + AluSq SINE Alu 127 298 -15 2707 80 3 0 chr20 19285870 19286258 -52867624 - L1PA14 LINE L1 -494 5667 5279 229 295 53 21 chr20 19286433 19286528 -52867354 + L2 LINE L2 3169 3266 -6 250 226 0 0 chr20 19289250 19289312 -52864570 + L1PB4 LINE L1 6091 6152 -4 22 56 0 0 chr20 19289312 19289348 -52864534 + AT_rich Low_complexity Low_complexity 1 36 0 263 218 122 54 chr20 19289995 19290142 -52863740 - MLT1J1 LTR MaLR -2 444 288 364 275 55 0 chr20 19290262 19290422 -52863460 - MLT1J2 LTR MaLR -294 156 21 274 293 37 0 chr20 19291378 19291460 -52862422 + L2 LINE L2 3228 3312 -1 1334 227 105 0 chr20 19291697 19292050 -52861832 - L1MB8 LINE L1 -83 6095 5706 514 295 78 16 chr20 19292342 19292535 -52861347 + MIR SINE MIR 5 209 -53 284 284 39 29 chr20 19292560 19292662 -52861220 + MIR SINE MIR 150 252 -10 330 239 33 11 chr20 19292699 19292791 -52861091 + L2 LINE L2 3176 3269 -44 446 338 0 14 chr20 19293408 19293556 -52860326 - MIR3 SINE MIR -6 202 57 396 40 0 0 chr20 19294748 19294798 -52859084 + (TG)n Simple_repeat Simple_repeat 2 51 0 375 280 0 11 chr20 19296201 19296294 -52857588 + L2 LINE L2 3181 3272 0 2199 131 0 6 chr20 19297413 19297726 -52856156 + AluSx SINE Alu 1 311 -1 235 253 72 0 chr20 19297763 19297846 -52856036 - L1MC4 LINE L1 -1340 6702 6614 203 241 17 0 chr20 19298237 19298295 -52855587 + (TG)n Simple_repeat Simple_repeat 2 60 0 237 33 0 0 chr20 19299116 19299146 -52854736 + (A)n Simple_repeat Simple_repeat 1 30 0 317 274 170 15 chr20 19301273 19301408 -52852474 - MIR SINE MIR -76 186 31 432 0 0 0 chr20 19302109 19302157 -52851725 + (CA)n Simple_repeat Simple_repeat 2 49 0 207 298 73 46 chr20 19303879 19304030 -52849852 + L2 LINE L2 2826 2980 -333 632 242 22 44 chr20 19304393 19304575 -52849307 - MER5B DNA MER1_type 0 178 1 237 132 0 0 chr20 19304740 19304778 -52849104 + (T)n Simple_repeat Simple_repeat 1 38 0 220 299 23 23 chr20 19305547 19305634 -52848248 + MIR SINE MIR 90 176 -86 192 77 0 0 chr20 19305652 19305678 -52848204 + (A)n Simple_repeat Simple_repeat 1 26 0 186 71 0 0 chr20 19306314 19306342 -52847540 + (T)n Simple_repeat Simple_repeat 1 28 0 350 269 103 139 chr20 19307548 19307916 -52845966 + MLT1K LTR MaLR 62 416 -172 1268 236 210 14 chr20 19307958 19308454 -52845428 + LTR50 LTR ERVL 203 795 0 270 0 0 0 chr20 19308680 19308710 -52845172 + (TA)n Simple_repeat Simple_repeat 2 31 0 820 187 0 55 chr20 19308710 19308892 -52844990 - AluJo SINE Alu -22 290 119 21 0 0 0 chr20 19308935 19308956 -52844926 + AT_rich Low_complexity Low_complexity 1 21 0 195 295 16 16 chr20 19309123 19309184 -52844698 + L2 LINE L2 3134 3194 -78 222 252 49 73 chr20 19309229 19309352 -52844530 + MIR SINE MIR 72 191 -71 287 190 35 0 chr20 19309462 19309520 -52844362 - MLT1G1 LTR MaLR -2 593 534 560 245 65 7 chr20 19310872 19311027 -52842855 + MER117 DNA MER1_type 2 165 -32 2257 113 3 0 chr20 19311170 19311472 -52842410 + AluSx SINE Alu 1 303 -9 1535 173 129 18 chr20 19311746 19312018 -52841864 - AluJb SINE Alu 0 302 1 221 347 178 27 chr20 19312389 19312614 -52841268 + L2 LINE L2 2985 3243 -29 445 293 74 42 chr20 19313585 19313800 -52840082 - L2 LINE L2 -17 3296 3075 288 91 0 0 chr20 19313895 19313939 -52839943 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 893 308 28 18 chr20 19314693 19315129 -52838753 + LTR16C LTR ERVL 1 491 0 308 287 50 0 chr20 19315130 19315231 -52838651 - MIR SINE MIR -52 210 105 215 349 12 0 chr20 19315457 19315540 -52838342 - L2 LINE L2 -1 3271 3188 377 278 160 0 chr20 19317503 19317647 -52836235 - MIR SINE MIR -13 249 83 2066 130 0 3 chr20 19317743 19318051 -52835831 - AluSg SINE Alu 0 307 1 290 280 60 20 chr20 19318071 19318171 -52835711 + L2 LINE L2 298 401 -2913 221 284 134 8 chr20 19319071 19319205 -52834677 - MIR SINE MIR -20 242 92 191 334 80 65 chr20 19319294 19320036 -52833846 + L2 LINE L2 1352 2104 -1210 516 350 40 5 chr20 19320751 19320974 -52832908 + MIR SINE MIR 23 253 -9 599 304 20 49 chr20 19321643 19321890 -52831992 + MIR SINE MIR 21 260 -2 1426 198 96 31 chr20 19322649 19322972 -52830910 - MER2 DNA MER2_type 0 344 1 1056 248 75 28 chr20 19323854 19324213 -52829669 - HsTC2 DNA Tc2 -3 1895 1520 1452 177 24 0 chr20 19324795 19325043 -52828839 - AluJo SINE Alu -4 308 55 520 325 57 68 chr20 19325210 19325364 -52828518 - LTR16C LTR ERVL -33 458 304 2399 207 8 37 chr20 19325364 19325882 -52828000 + MLT1D LTR MaLR 1 503 -2 520 325 57 68 chr20 19325882 19326096 -52827786 - LTR16C LTR ERVL -187 304 94 282 29 0 0 chr20 19326242 19326277 -52827605 + (TG)n Simple_repeat Simple_repeat 2 36 0 2855 3 0 3 chr20 19326968 19327275 -52826607 - AluYa5 SINE Alu -5 306 1 245 330 30 0 chr20 19328643 19328743 -52825139 + LTR33 LTR ERVL 419 521 0 224 200 15 31 chr20 19329157 19329222 -52824660 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1349 136 5 0 chr20 19329974 19330187 -52823695 + L1MC/D LINE L1 5329 5542 -791 4537 207 29 13 chr20 19330265 19331745 -52822137 - L1MC/D LINE L1 -673 5940 4433 396 0 0 0 chr20 19331745 19331789 -52822093 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 4537 207 29 13 chr20 19331789 19331831 -52822051 - L1MC/D LINE L1 -2180 4433 4393 4648 172 9 74 chr20 19331831 19332789 -52821093 - L1MC/D LINE L1 -5498 928 33 270 226 134 73 chr20 19334164 19334328 -52819554 - MIR SINE MIR -74 188 15 248 263 10 40 chr20 19334539 19334638 -52819244 - MLT1H LTR MaLR 0 549 454 384 231 8 26 chr20 19334799 19334916 -52818966 - MLT1H LTR MaLR -376 173 59 342 274 19 0 chr20 19336115 19336221 -52817661 - L2 LINE L2 -77 3236 3129 312 244 49 32 chr20 19336227 19336350 -52817532 - L2 LINE L2 -508 2806 2682 801 97 14 28 chr20 19337834 19337978 -52815904 + (TTCC)n Simple_repeat Simple_repeat 3 144 0 1276 198 117 14 chr20 19337980 19338263 -52815619 - AluJo SINE Alu 0 312 1 2482 63 89 0 chr20 19338296 19338612 -52815270 - LTR14A LTR ERVK 0 344 1 278 265 0 41 chr20 19338707 19338805 -52815077 + MIR SINE MIR 159 252 -10 1252 270 101 13 chr20 19339115 19339493 -52814389 - LTR16C LTR ERVL 0 491 81 1931 251 62 10 chr20 19341919 19342438 -52811444 + L1ME3 LINE L1 5524 6069 -93 372 94 0 0 chr20 19342439 19342492 -52811390 + (TG)n Simple_repeat Simple_repeat 1 53 0 196 346 182 35 chr20 19342732 19342963 -52810919 - L3 LINE CR1 -7 1570 1306 596 318 60 86 chr20 19343322 19343803 -52810079 - L2 LINE L2 -2 3270 2803 233 324 167 20 chr20 19343984 19344188 -52809694 - L2 LINE L2 -2501 813 580 2140 120 0 0 chr20 19345001 19345292 -52808590 - AluSg1 SINE Alu -18 291 1 227 322 25 17 chr20 19345488 19345606 -52808276 + L2 LINE L2 3103 3221 -92 736 208 56 4 chr20 19346296 19346497 -52807385 + L1MB7 LINE L1 5926 6131 -43 226 267 168 69 chr20 19348676 19348807 -52805075 - MIR SINE MIR -71 191 48 993 331 105 38 chr20 19349672 19350443 -52803439 - L2 LINE L2 0 3313 2496 554 335 107 14 chr20 19350446 19350792 -52803090 - MLT1I LTR MaLR -4 405 28 609 270 27 77 chr20 19350822 19351081 -52802801 - L2 LINE L2 -812 2502 2257 636 183 17 25 chr20 19354904 19355145 -52798737 + CT-rich Low_complexity Low_complexity 1 239 0 522 101 45 11 chr20 19355148 19355237 -52798645 + T-rich Low_complexity Low_complexity 4 95 0 440 290 130 7 chr20 19357395 19357533 -52796349 + MIR3 SINE MIR 42 196 -12 245 248 114 48 chr20 19359547 19359652 -52794230 + MER5A DNA MER1_type 44 155 -34 182 262 0 0 chr20 19360194 19360236 -52793646 - L2 LINE L2 -782 2532 2491 516 222 0 9 chr20 19361518 19361626 -52792256 + Tigger3(Golem) DNA MER2_type 1 107 -2922 * 3640 148 45 18 chr20 19361618 19362348 -52791534 + Tigger3(Golem) DNA MER2_type 2278 3027 -2 350 276 189 27 chr20 19362363 19362548 -52791334 - MIR SINE MIR 0 262 48 186 255 21 0 chr20 19363323 19363370 -52790512 + L2 LINE L2 3266 3313 0 399 348 79 35 chr20 19364060 19364287 -52789595 - L2 LINE L2 0 3272 3036 1424 227 82 5 chr20 19364431 19364858 -52789024 + Charlie4a DNA MER1_type 35 494 -14 823 329 75 9 chr20 19364868 19365309 -52788573 + L2 LINE L2 2839 3308 -5 296 215 21 32 chr20 19366281 19366374 -52787508 + GA-rich Low_complexity Low_complexity 2 93 0 868 165 0 0 chr20 19366419 19366552 -52787330 + FLAM_C SINE Alu 1 133 -10 299 201 174 118 chr20 19366660 19366755 -52787127 - MIR SINE MIR 0 262 174 645 49 0 0 chr20 19366755 19366836 -52787046 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 2041 84 0 49 chr20 19366840 19367126 -52786756 - AluY SINE Alu -39 272 1 299 201 174 118 chr20 19367126 19367169 -52786713 - MIR SINE MIR -90 172 111 332 245 138 0 chr20 19369802 19369896 -52783986 - MER96 DNA MER1_type? 0 175 69 222 296 265 0 chr20 19371577 19371709 -52782173 - MIR SINE MIR -25 237 71 537 296 136 20 chr20 19371957 19372251 -52781631 - MER102b DNA MER1_type -2 339 12 850 188 34 0 chr20 19372454 19372630 -52781252 - MER3 DNA MER1_type -22 187 6 23 78 0 0 chr20 19373677 19373728 -52780154 + AT_rich Low_complexity Low_complexity 1 51 0 210 194 83 0 chr20 19373803 19373839 -52780043 + L2 LINE L2 3154 3192 -80 815 257 25 38 chr20 19375538 19375775 -52778107 + L2 LINE L2 3078 3311 -2 505 205 216 32 chr20 19375782 19375843 -52778039 + MER20 DNA MER1_type 1 49 -170 2035 111 46 0 chr20 19375843 19376123 -52777759 - AluSg SINE Alu -17 293 1 505 205 216 32 chr20 19376123 19376246 -52777636 + MER20 DNA MER1_type 49 219 0 285 256 30 60 chr20 19376713 19376846 -52777036 - MLT1J LTR MaLR -57 454 326 270 116 0 0 chr20 19376971 19377014 -52776868 + (TG)n Simple_repeat Simple_repeat 2 44 0 2281 67 60 0 chr20 19378153 19378438 -52775444 + AluY SINE Alu 1 302 -9 26 0 0 0 chr20 19378754 19378780 -52775102 + AT_rich Low_complexity Low_complexity 1 26 0 41 96 0 0 chr20 19378954 19379079 -52774803 + AT_rich Low_complexity Low_complexity 1 125 0 812 170 21 27 chr20 19379851 19380039 -52773843 - MER53 DNA DNA -2 187 1 21 0 0 0 chr20 19380250 19380271 -52773611 + AT_rich Low_complexity Low_complexity 1 21 0 350 329 37 12 chr20 19380451 19380612 -52773270 + MIR3 SINE MIR 23 187 -21 387 83 0 0 chr20 19381225 19381285 -52772597 + (TC)n Simple_repeat Simple_repeat 2 61 0 251 356 68 20 chr20 19381698 19381844 -52772038 - MIR SINE MIR -108 154 2 21 57 0 0 chr20 19382653 19382688 -52771194 + AT_rich Low_complexity Low_complexity 1 35 0 1672 190 10 10 chr20 19382689 19382978 -52770904 - AluJo SINE Alu -23 289 1 912 221 6 0 chr20 19383044 19383202 -52770680 + MER5A DNA MER1_type 1 159 -30 247 325 114 87 chr20 19384641 19384718 -52769164 + L2 LINE L2 2835 2908 -364 2034 143 41 39 chr20 19384718 19385081 -52768801 + THE1B LTR MaLR 1 364 0 247 325 114 87 chr20 19385081 19385170 -52768712 + L2 LINE L2 2908 2993 -279 2293 128 0 0 chr20 19385170 19385476 -52768406 - AluSx SINE Alu -6 306 1 247 325 114 87 chr20 19385476 19385720 -52768162 + L2 LINE L2 2993 3257 -15 * 252 370 55 0 chr20 19385705 19385851 -52768031 - L2 LINE L2 -562 2752 2599 295 243 0 57 chr20 19385901 19385971 -52767911 - L2 LINE L2 0 3272 3207 302 367 77 24 chr20 19385991 19386239 -52767643 - L2 LINE L2 -747 2567 2307 24 53 0 0 chr20 19386696 19386734 -52767148 + AT_rich Low_complexity Low_complexity 1 38 0 2419 68 0 3 chr20 19387408 19387703 -52766179 + AluY SINE Alu 1 294 -17 268 339 144 50 chr20 19388019 19388302 -52765580 - L2 LINE L2 -571 2743 2413 2151 200 11 29 chr20 19388302 19388778 -52765104 - MLT1C LTR MaLR 0 467 1 268 339 144 50 chr20 19388778 19388875 -52765007 - L2 LINE L2 -901 2413 2327 429 299 39 53 chr20 19389852 19390059 -52763823 + MIR SINE MIR 17 220 -42 532 257 37 32 chr20 19390926 19391113 -52762769 + MIR SINE MIR 75 262 0 316 239 30 45 chr20 19391653 19391787 -52762095 - MLT1H LTR MaLR -374 175 44 21 0 0 0 chr20 19392440 19392461 -52761421 + AT_rich Low_complexity Low_complexity 1 21 0 2063 107 36 0 chr20 19393675 19393956 -52759926 + AluSq SINE Alu 1 291 -22 187 344 0 31 chr20 19394113 19394177 -52759705 - MIR SINE MIR -167 95 34 224 122 24 0 chr20 19395792 19395833 -52758049 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 1096 231 77 89 chr20 19395988 19396087 -52757795 + MLT1F1 LTR MaLR 3 102 -465 2100 109 0 3 chr20 19396087 19396396 -52757486 - AluSg SINE Alu 0 308 1 1096 231 77 89 chr20 19396396 19396854 -52757028 + MLT1F1 LTR MaLR 102 554 -13 573 259 40 70 chr20 19397542 19397940 -52755942 - L1MC4 LINE L1 -122 7920 7535 288 229 10 0 chr20 19397946 19398042 -52755840 + (TAAA)n Simple_repeat Simple_repeat 2 98 0 667 286 27 46 chr20 19398063 19398433 -52755449 - L1MC4 LINE L1 -530 7512 7150 362 259 161 35 chr20 19398452 19398626 -52755256 - MIR SINE MIR -37 225 30 404 324 67 78 chr20 19398817 19399190 -52754692 - HAL1 LINE L1 -2115 392 24 1848 130 38 3 chr20 19399299 19399592 -52754290 + AluJb SINE Alu 1 303 -9 783 320 59 20 chr20 19400317 19400707 -52753175 + LTR16C LTR ERVL 87 491 0 453 241 84 30 chr20 19400857 19401023 -52752859 - L2 LINE L2 -14 3299 3125 233 280 20 0 chr20 19401071 19401121 -52752761 + L2 LINE L2 3191 3241 -31 1643 168 10 36 chr20 19401123 19401432 -52752450 - AluJb SINE Alu -11 301 1 182 356 100 30 chr20 19401620 19401890 -52751992 - L2 LINE L2 -554 2760 2472 24 53 0 0 chr20 19402249 19402287 -52751595 + AT_rich Low_complexity Low_complexity 1 38 0 1510 75 65 0 chr20 19403356 19403581 -52750301 + AluY SINE Alu 94 331 0 242 309 64 0 chr20 19405670 19405764 -52748118 - MIR SINE MIR -13 249 150 583 75 0 0 chr20 19406086 19406166 -52747716 + MADE1 DNA Mariner 1 80 0 2340 40 4 0 chr20 19406683 19406955 -52746927 + AluY SINE Alu 35 307 -4 382 300 39 23 chr20 19407928 19408058 -52745824 + MIR SINE MIR 47 178 -84 1919 161 6 6 chr20 19408183 19408494 -52745388 + AluSx SINE Alu 1 311 -1 626 267 49 21 chr20 19412370 19412696 -52741186 - L1MC4 LINE L1 0 8042 7708 944 161 161 20 chr20 19413313 19413512 -52740370 - AluJo SINE Alu -7 305 79 231 316 20 20 chr20 19413647 19413745 -52740137 + MIR3 SINE MIR 100 197 -11 2060 113 0 45 chr20 19413904 19414213 -52739669 + AluSx SINE Alu 1 295 -17 24 32 0 0 chr20 19414935 19414966 -52738916 + AT_rich Low_complexity Low_complexity 1 31 0 820 264 80 17 chr20 19415409 19415708 -52738174 - MER102a DNA MER1_type -12 318 1 235 276 29 29 chr20 19416041 19416146 -52737736 - MLT1I LTR MaLR 0 409 305 297 284 11 11 chr20 19416293 19416381 -52737501 - MLT1J1 LTR MaLR -290 156 69 1822 168 53 30 chr20 19416974 19417408 -52736474 - L1MA8 LINE L1 -4 6287 5844 2230 132 13 106 chr20 19417492 19418030 -52735852 - L1MA8 LINE L1 -432 5859 5372 629 302 90 17 chr20 19418164 19418518 -52735364 - MLT1K LTR MaLR -15 573 194 180 111 0 0 chr20 19418584 19418611 -52735271 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 24 53 0 0 chr20 19419207 19419245 -52734637 + AT_rich Low_complexity Low_complexity 1 38 0 202 125 12 62 chr20 19423073 19423153 -52730729 + (TGAA)n Simple_repeat Simple_repeat 2 77 0 552 251 62 37 chr20 19423383 19423626 -52730256 - L1ME3A LINE L1 0 6170 5922 284 254 35 42 chr20 19423874 19424016 -52729866 - L1ME1 LINE L1 -62 6104 5964 683 231 53 33 chr20 19424904 19425203 -52728679 - L1MC5 LINE L1 -36 7925 7621 550 304 61 17 chr20 19425981 19426211 -52727671 + MIR SINE MIR 15 254 -8 615 266 50 29 chr20 19426246 19426525 -52727357 + L1ME3A LINE L1 5885 6169 -1 507 320 19 22 chr20 19427867 19428235 -52725647 + L2 LINE L2 1406 1864 -1450 184 271 119 0 chr20 19428237 19428296 -52725586 + L2 LINE L2 2393 2458 -856 1852 223 87 31 chr20 19428329 19428939 -52724943 - LTR48B LTR ERV1 0 644 1 455 238 150 86 chr20 19429134 19429520 -52724362 - LTR50 LTR ERVL -41 754 344 2063 128 0 0 chr20 19429542 19429838 -52724044 + AluSx SINE Alu 1 296 -16 287 196 157 0 chr20 19429899 19430001 -52723881 - LTR50 LTR ERVL -638 157 40 2031 125 30 13 chr20 19431337 19431641 -52722241 - AluSx SINE Alu -3 309 1 423 310 49 27 chr20 19431813 19431997 -52721885 + MER5A DNA MER1_type 2 189 0 957 303 44 34 chr20 19432781 19432890 -52720992 + LTR16C LTR ERVL 1 107 -384 2258 110 3 3 chr20 19432890 19433198 -52720684 - AluSg SINE Alu -2 308 1 957 303 44 34 chr20 19433198 19433564 -52720318 + LTR16C LTR ERVL 107 481 -10 809 219 10 42 chr20 19433863 19434055 -52719827 - MER5A DNA MER1_type -3 186 1 467 280 94 104 chr20 19434410 19434746 -52719136 + L1M4 LINE L1 4254 4592 -1554 2579 89 14 0 chr20 19434746 19435096 -52718786 - THE1A LTR MaLR 0 355 1 11909 93 1 5 chr20 19435096 19436683 -52717199 - THE1A-int LTR MaLR 0 1580 1 2863 65 3 0 chr20 19436683 19437037 -52716845 - THE1A LTR MaLR 0 355 1 467 280 94 104 chr20 19437037 19437080 -52716802 + L1M4 LINE L1 4590 4632 -1514 2898 131 39 2 chr20 19437080 19437567 -52716315 - L1MC1 LINE L1 -18 6315 5811 467 280 94 104 chr20 19437567 19437781 -52716101 + L1M4 LINE L1 4632 4844 -1302 22 35 0 0 chr20 19437792 19437821 -52716061 + AT_rich Low_complexity Low_complexity 1 29 0 378 302 28 0 chr20 19438012 19438118 -52715764 - MIR SINE MIR -65 143 35 1942 138 40 0 chr20 19438303 19438737 -52715145 + AluSx SINE Alu 1 446 0 270 0 0 0 chr20 19439289 19439319 -52714563 + (A)n Simple_repeat Simple_repeat 1 30 0 716 288 30 26 chr20 19439743 19439976 -52713906 + MIR SINE MIR 16 249 -13 183 205 0 0 chr20 19441914 19441953 -52711929 + CT-rich Low_complexity Low_complexity 2 40 0 314 286 0 71 chr20 19442183 19442281 -52711601 - L1ME LINE L1 -547 5574 5484 329 330 84 51 chr20 19442329 19442662 -52711220 - L1ME LINE L1 -944 5202 4859 900 169 33 0 chr20 19442812 19442995 -52710887 + L1MB2 LINE L1 5981 6169 -2 735 251 127 11 chr20 19443060 19443494 -52710388 + L1ME4a LINE L1 5553 6036 -85 292 357 42 0 chr20 19443606 19443749 -52710133 - MIR SINE MIR -2 260 112 2224 102 0 3 chr20 19445499 19445794 -52708088 + AluSx SINE Alu 1 294 -18 551 196 27 0 chr20 19446516 19446628 -52707254 + MER53 DNA DNA 75 189 0 2286 53 3 46 chr20 19446801 19447103 -52706779 + AluSc SINE Alu 1 289 -20 307 194 233 10 chr20 19447225 19447328 -52706554 + MIR SINE MIR 72 197 -65 2305 98 0 0 chr20 19449449 19449744 -52704138 + AluY SINE Alu 1 295 -16 1047 318 41 6 chr20 19449878 19450218 -52703664 + LTR16A LTR ERVL 96 447 -3 2114 105 16 33 chr20 19450920 19451225 -52702657 + AluSx SINE Alu 1 300 -12 255 322 136 8 chr20 19452073 19452191 -52701691 + MER5B DNA MER1_type 44 176 -2 324 0 0 0 chr20 19453156 19453192 -52700690 + (TG)n Simple_repeat Simple_repeat 2 37 0 284 362 55 12 chr20 19453997 19454160 -52699722 + L2 LINE L2 2866 3035 -237 2395 93 3 0 chr20 19454423 19454724 -52699158 + AluSp SINE Alu 1 302 -11 762 206 0 0 chr20 19454738 19454869 -52699013 + FLAM_C SINE Alu 3 133 -10 245 394 11 0 chr20 19454874 19454968 -52698914 - MIR SINE MIR -79 129 35 2309 107 0 0 chr20 19455228 19455536 -52698346 - AluSx SINE Alu -4 308 1 1300 258 59 19 chr20 19457959 19458381 -52695501 - MLT1C LTR MaLR -28 439 1 225 0 0 0 chr20 19458694 19458719 -52695163 + (T)n Simple_repeat Simple_repeat 1 25 0 448 293 56 56 chr20 19458837 19459052 -52694830 - MIR SINE MIR -12 250 36 307 332 129 20 chr20 19461247 19461449 -52692433 - MIR SINE MIR -26 236 13 2306 110 0 3 chr20 19463798 19464106 -52689776 - AluSx SINE Alu -5 307 1 306 235 0 49 chr20 19465345 19465426 -52688456 - L2 LINE L2 0 3313 3237 198 0 0 0 chr20 19465798 19465820 -52688062 + (T)n Simple_repeat Simple_repeat 1 22 0 4693 117 28 20 chr20 19466448 19467134 -52686748 - LTR8 LTR ERV1 0 691 1 187 316 18 0 chr20 19467713 19467770 -52686112 - L2 LINE L2 -663 2651 2594 248 291 106 20 chr20 19468136 19468287 -52685595 + MIR SINE MIR 99 262 0 21 36 0 0 chr20 19468338 19468366 -52685516 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr20 19468474 19468503 -52685379 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr20 19469164 19469189 -52684693 + AT_rich Low_complexity Low_complexity 1 25 0 354 264 0 0 chr20 19470033 19470105 -52683777 + Tigger7 DNA MER2_type 1 72 -478 1679 157 26 4 chr20 19470108 19470376 -52683506 - Tigger7 DNA MER2_type -203 347 74 2130 105 65 12 chr20 19470377 19470701 -52683181 + Tigger7 DNA MER2_type 2147 2487 0 738 92 23 0 chr20 19471375 19471505 -52682377 + (TCTA)n Simple_repeat Simple_repeat 2 134 0 2269 214 52 58 chr20 19471580 19472137 -52681745 - MLT2B3 LTR ERVL 0 554 1 999 220 17 60 chr20 19472243 19472475 -52681407 + MER58A DNA MER1_type 3 224 0 225 0 0 0 chr20 19473606 19473631 -52680251 + (A)n Simple_repeat Simple_repeat 1 25 0 597 278 27 11 chr20 19473875 19474062 -52679820 + L3b LINE CR1 1302 1491 -92 260 240 0 0 chr20 19474177 19474227 -52679655 - L2 LINE L2 -8 3305 3256 2136 111 0 34 chr20 19474279 19474576 -52679306 + AluSx SINE Alu 5 291 -21 180 0 0 0 chr20 19474931 19474951 -52678931 + (A)n Simple_repeat Simple_repeat 1 20 0 3431 136 148 25 chr20 19475032 19475679 -52678203 - LTR8A LTR ERV1 0 727 1 490 282 72 6 chr20 19475949 19476130 -52677752 - MIR SINE MIR -56 206 14 1379 232 32 6 chr20 19476215 19476530 -52677352 - MLT1H1 LTR MaLR 0 555 233 1847 197 88 24 chr20 19476530 19476997 -52676885 - L1ME3A LINE L1 -215 5955 5459 238 327 47 37 chr20 19478154 19478261 -52675621 + L2 LINE L2 3116 3223 -49 659 256 0 0 chr20 19479420 19479553 -52674329 - MER5B DNA MER1_type 0 178 46 2174 97 0 79 chr20 19479558 19479898 -52673984 + AluSq SINE Alu 1 313 0 23 0 0 0 chr20 19479903 19479926 -52673956 + AT_rich Low_complexity Low_complexity 1 23 0 351 298 60 60 chr20 19479991 19480142 -52673740 - L2 LINE L2 0 3272 3122 657 239 0 0 chr20 19480489 19480669 -52673213 + CT-rich Low_complexity Low_complexity 1 180 0 24 32 0 0 chr20 19480922 19480953 -52672929 + AT_rich Low_complexity Low_complexity 1 31 0 264 333 50 0 chr20 19482485 19482584 -52671298 + LTR67 LTR ERVL 101 204 -353 257 354 50 10 chr20 19482967 19483066 -52670816 - MIR SINE MIR -136 126 24 2175 131 33 12 chr20 19483112 19483448 -52670434 + L1PA16 LINE L1 5815 6157 -9 2272 114 0 13 chr20 19483488 19483846 -52670036 + AluSx SINE Alu 1 354 0 456 291 139 12 chr20 19484856 19485028 -52668854 + MIR SINE MIR 16 209 -53 498 294 0 3 chr20 19487493 19487785 -52666097 + GA-rich Low_complexity Low_complexity 1 290 0 195 245 0 31 chr20 19487804 19487902 -52665980 + GA-rich Low_complexity Low_complexity 2 96 0 338 279 16 0 chr20 19487948 19488070 -52665812 + GA-rich Low_complexity Low_complexity 1 124 0 21 0 0 0 chr20 19489462 19489483 -52664399 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 19490300 19490344 -52663538 + (CA)n Simple_repeat Simple_repeat 2 45 0 285 75 0 0 chr20 19490456 19490496 -52663386 + (TG)n Simple_repeat Simple_repeat 1 40 0 627 370 80 8 chr20 19490883 19491359 -52662523 + L2 LINE L2 2804 3313 0 202 274 14 14 chr20 19491383 19491456 -52662426 - MIR SINE MIR -44 218 146 360 178 33 33 chr20 19491465 19491555 -52662327 - MLT1J LTR MaLR -7 504 415 505 281 117 35 chr20 19491584 19491840 -52662042 - MLT1J LTR MaLR -196 315 39 223 276 13 26 chr20 19491863 19491939 -52661943 - MIR SINE MIR -83 125 51 257 276 32 77 chr20 19492239 19492395 -52661487 - MIR SINE MIR -14 248 100 2218 115 3 0 chr20 19492395 19492691 -52661191 - AluSq SINE Alu -16 297 1 478 280 39 50 chr20 19494122 19494240 -52659642 - MIR SINE MIR -60 202 85 2389 104 23 49 chr20 19494240 19494625 -52659257 + THE1C LTR MaLR 1 375 0 478 280 39 50 chr20 19494625 19494688 -52659194 - MIR SINE MIR -177 85 23 284 364 65 45 chr20 19494888 19495135 -52658747 - L2 LINE L2 -205 3067 2816 288 237 0 0 chr20 19495184 19495243 -52658639 + Charlie7 DNA MER1_type 43 101 -2511 2212 107 3 17 chr20 19495425 19495724 -52658158 - AluSx SINE Alu -15 297 3 538 288 176 21 chr20 19495994 19496369 -52657513 + L2 LINE L2 2863 3295 -18 422 114 14 0 chr20 19496386 19496456 -52657426 + (TGGA)n Simple_repeat Simple_repeat 4 74 0 402 254 34 50 chr20 19496575 19496770 -52657112 - MLT1K LTR MaLR -2 586 395 * 555 90 0 0 chr20 19496769 19496847 -52657035 + (TCCCC)n Simple_repeat Simple_repeat 5 82 0 * 690 80 18 9 chr20 19496844 19496956 -52656926 + (TTTC)n Simple_repeat Simple_repeat 2 114 0 272 291 0 25 chr20 19497353 19497432 -52656450 - MLT1L LTR MaLR -414 201 125 433 303 6 69 chr20 19500420 19500595 -52653287 + MIR SINE MIR 59 222 -40 232 116 23 0 chr20 19502138 19502181 -52651701 - HSMAR1 DNA Mariner 0 1287 1244 398 69 17 0 chr20 19502808 19502866 -52651016 + (TG)n Simple_repeat Simple_repeat 2 60 0 213 179 38 19 chr20 19504724 19504830 -52649052 + GA-rich Low_complexity Low_complexity 1 108 0 2134 104 3 3 chr20 19505413 19505702 -52648180 + AluSq SINE Alu 1 289 -24 30 27 0 0 chr20 19505815 19505852 -52648030 + AT_rich Low_complexity Low_complexity 1 37 0 186 189 0 0 chr20 19505906 19505943 -52647939 + T-rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr20 19507007 19507036 -52646846 + (T)n Simple_repeat Simple_repeat 1 29 0 374 200 25 0 chr20 19507277 19507357 -52646525 + MER20 DNA MER1_type 42 123 -96 829 133 12 40 chr20 19507357 19507558 -52646324 - MSTB1 LTR MaLR 0 432 262 478 286 45 30 chr20 19507681 19507814 -52646068 + L2 LINE L2 3136 3270 -2 1015 215 9 27 chr20 19508791 19508913 -52644969 + MER20 DNA MER1_type 1 119 -100 1965 194 28 31 chr20 19508913 19509371 -52644511 - MSTB2 LTR MaLR 0 457 1 1015 215 9 27 chr20 19509371 19509471 -52644411 + MER20 DNA MER1_type 119 219 0 195 296 49 12 chr20 19509483 19509564 -52644318 + MIR SINE MIR 118 201 -61 273 356 76 0 chr20 19509888 19510006 -52643876 + MER5A DNA MER1_type 7 133 -56 318 278 72 0 chr20 19510054 19510151 -52643731 + L2 LINE L2 3192 3295 -18 311 203 103 128 chr20 19510711 19510935 -52642947 - Charlie8 DNA MER1_type -3 1425 1197 2030 145 3 3 chr20 19510935 19511238 -52642644 - AluSx SINE Alu -9 303 1 311 203 103 128 chr20 19511238 19511292 -52642590 - Charlie8 DNA MER1_type -231 1197 59 316 250 121 0 chr20 19512156 19512280 -52641602 - MLT1H LTR MaLR 0 549 411 299 248 17 34 chr20 19512520 19512637 -52641245 - MLT1H LTR MaLR -412 137 23 294 247 93 0 chr20 19512732 19512829 -52641053 + MER113 DNA MER1_type? 306 411 -110 369 214 128 26 chr20 19514348 19514465 -52639417 - L2 LINE L2 -1 3312 3184 467 269 83 84 chr20 19514589 19514755 -52639127 - L1MC4 LINE L1 -2 8040 7875 2178 163 56 12 chr20 19514755 19515165 -52638717 + MSTA LTR MaLR 1 428 0 444 62 0 0 chr20 19515165 19515229 -52638653 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 467 269 83 84 chr20 19515229 19515676 -52638206 - L1MC4 LINE L1 -166 7876 7430 2126 120 0 23 chr20 19515676 19515984 -52637898 + AluSx SINE Alu 4 304 -8 2251 110 0 13 chr20 19515985 19516293 -52637589 + AluSx SINE Alu 2 305 -7 467 269 83 84 chr20 19516293 19516622 -52637260 - L1MC4 LINE L1 -611 7431 7095 248 265 73 0 chr20 19516744 19516812 -52637070 - MIR3 SINE MIR -21 187 115 671 219 110 0 chr20 19517595 19517759 -52636123 - MIR SINE MIR -10 252 71 192 299 122 56 chr20 19518510 19518617 -52635265 + MIR SINE MIR 19 132 -76 546 259 180 53 chr20 19518669 19519141 -52634741 - MLT1H LTR MaLR 0 549 18 342 0 0 0 chr20 19520051 19520089 -52633793 + (CA)n Simple_repeat Simple_repeat 2 39 0 204 40 0 0 chr20 19520095 19520120 -52633762 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 644 271 133 52 chr20 19520144 19520478 -52633404 + MLT1K LTR MaLR 2 394 -194 2404 101 49 9 chr20 19520478 19520826 -52633056 + THE1B LTR MaLR 1 362 -2 644 271 133 52 chr20 19520826 19521011 -52632871 + MLT1K LTR MaLR 394 563 -25 539 181 245 0 chr20 19521533 19521688 -52632194 + MER3 DNA MER1_type 9 201 -8 1870 134 43 0 chr20 19521756 19522033 -52631849 + AluSx SINE Alu 3 291 -21 586 270 37 5 chr20 19522105 19522270 -52631612 - MER5B DNA MER1_type -2 176 18 496 243 135 0 chr20 19522768 19522929 -52630953 + MER5A DNA MER1_type 4 189 0 282 56 0 0 chr20 19523293 19523329 -52630553 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 862 240 116 95 chr20 19523399 19523915 -52629967 + MLT1F LTR MaLR 14 540 -2 2156 172 9 28 chr20 19524239 19524705 -52629177 - L1PA16 LINE L1 -1075 5071 4615 5334 126 40 3 chr20 19524722 19524927 -52628955 + L1PA16 LINE L1 5080 5276 -890 195 42 0 0 chr20 19524927 19524951 -52628931 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5334 126 40 3 chr20 19524951 19525788 -52628094 + L1PA16 LINE L1 5276 6149 -17 731 206 82 0 chr20 19526214 19526384 -52627498 - MER58A DNA MER1_type -40 184 1 282 243 72 4 chr20 19526402 19526535 -52627347 + MER5A DNA MER1_type 1 188 -1 202 337 0 54 chr20 19526746 19526838 -52627044 - MIR3 SINE MIR -31 177 91 1312 260 102 21 chr20 19527192 19527869 -52626013 + L1PB1 LINE L1 6 737 -6126 14352 191 10 12 chr20 19527874 19531757 -52622125 + L1PB1 LINE L1 1113 5189 -1678 2291 107 0 10 chr20 19531757 19532066 -52621816 + AluSg SINE Alu 5 310 0 14352 191 10 12 chr20 19532066 19533738 -52620144 + L1PB1 LINE L1 5189 6862 -5 22 35 0 0 chr20 19533738 19533767 -52620115 + AT_rich Low_complexity Low_complexity 1 29 0 1787 162 141 11 chr20 19534277 19534654 -52619228 - MSTA LTR MaLR -2 426 1 194 274 20 0 chr20 19535237 19535288 -52618594 - L2 LINE L2 0 3272 3221 267 180 0 0 chr20 19535800 19535850 -52618032 - MIR SINE MIR -33 229 180 464 270 38 54 chr20 19535917 19536102 -52617780 + L2 LINE L2 3132 3313 0 254 341 102 12 chr20 19536141 19536308 -52617574 - MIR SINE MIR -75 187 6 284 313 69 38 chr20 19536363 19536523 -52617359 + MIR SINE MIR 28 192 -70 984 303 85 60 chr20 19536847 19537481 -52616401 + L2 LINE L2 2173 2822 -492 614 335 64 45 chr20 19537742 19538144 -52615738 + L2 LINE L2 2810 3224 -89 2228 115 0 0 chr20 19538144 19538440 -52615442 - AluSq SINE Alu -17 296 1 614 335 64 45 chr20 19538440 19538520 -52615362 + L2 LINE L2 3224 3301 -12 460 283 88 18 chr20 19540103 19540145 -52613737 - MIR SINE MIR -8 254 216 197 33 33 0 chr20 19540145 19540175 -52613707 + (TA)n Simple_repeat Simple_repeat 2 32 0 460 283 88 18 chr20 19540175 19540331 -52613551 - MIR SINE MIR -46 216 49 186 143 0 0 chr20 19540434 19540469 -52613413 + (A)n Simple_repeat Simple_repeat 1 35 0 2391 99 0 0 chr20 19540568 19540871 -52613011 - AluSx SINE Alu -9 303 1 365 292 101 112 chr20 19541451 19541879 -52612003 - L2 LINE L2 -13 3259 2837 21 36 0 0 chr20 19542314 19542342 -52611540 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr20 19542398 19542440 -52611442 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr20 19543526 19543564 -52610318 + AT_rich Low_complexity Low_complexity 1 38 0 2260 118 0 3 chr20 19543582 19543887 -52609995 + AluSx SINE Alu 1 304 -8 627 246 145 39 chr20 19547513 19548038 -52605844 - MLT1G LTR MaLR -2 588 1 534 212 53 71 chr20 19548161 19548208 -52605674 - MER63A DNA MER1_type -1478 210 164 2328 117 0 0 chr20 19548208 19548507 -52605375 - AluSx SINE Alu -13 299 1 534 212 53 71 chr20 19548507 19548646 -52605236 - MER63A DNA MER1_type -1524 164 25 24 0 0 0 chr20 19548818 19548842 -52605040 + AT_rich Low_complexity Low_complexity 1 24 0 2099 53 0 0 chr20 19548855 19549098 -52604784 + AluY SINE Alu 53 295 -16 910 188 0 0 chr20 19549098 19549242 -52604640 - FRAM SINE Alu -32 144 1 251 337 0 23 chr20 19549248 19549334 -52604548 + MIR SINE MIR 26 109 -153 2179 98 7 0 chr20 19549388 19549675 -52604207 - AluSc SINE Alu -20 289 1 414 0 0 0 chr20 19549755 19549801 -52604081 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 422 49 16 0 chr20 19552682 19552743 -52601139 + (CA)n Simple_repeat Simple_repeat 2 63 0 184 284 95 77 chr20 19553050 19553335 -52600547 + L2 LINE L2 2933 3222 -91 * 308 252 259 7 chr20 19553311 19553446 -52600436 + MER5A DNA MER1_type 15 183 -6 320 228 25 25 chr20 19553458 19553537 -52600345 - L1 LINE L1 -3012 3134 3056 5123 179 20 5 chr20 19553556 19554628 -52599254 + L1MA4 LINE L1 3773 4860 -1286 5712 23 0 0 chr20 19554918 19555533 -52598349 - SVA Other Other -1 1385 771 4600 159 47 20 chr20 19555533 19556942 -52596940 + L1MA4 LINE L1 4845 6294 -6 1106 263 107 13 chr20 19557437 19557946 -52595936 + MLT1G LTR MaLR 1 520 -70 559 266 101 0 chr20 19558017 19558186 -52595696 + MER58A DNA MER1_type 29 214 -10 1073 189 22 0 chr20 19558196 19558381 -52595501 + MER5A DNA MER1_type 1 189 0 317 210 32 0 chr20 19558480 19558542 -52595340 + MLT1J LTR MaLR 110 173 -338 2363 45 0 7 chr20 19558708 19559025 -52594857 + AluY SINE Alu 1 315 0 188 311 176 25 chr20 19559494 19559613 -52594269 - MIR SINE MIR -112 150 14 342 281 52 10 chr20 19560963 19561059 -52592823 - MER91C DNA MER1_type -6 134 35 23 0 0 0 chr20 19561804 19561827 -52592055 + AT_rich Low_complexity Low_complexity 1 23 0 33 43 0 0 chr20 19562152 19562199 -52591683 + AT_rich Low_complexity Low_complexity 1 47 0 292 179 24 49 chr20 19562211 19562334 -52591548 + (TATAA)n Simple_repeat Simple_repeat 1 120 0 887 199 45 6 chr20 19562733 19562909 -52590973 + MER5A DNA MER1_type 2 184 -5 473 326 24 30 chr20 19563244 19563599 -52590283 - L1ME LINE L1 -415 5706 5351 357 311 102 20 chr20 19563755 19563999 -52589883 - L1ME LINE L1 -1006 5140 4877 319 267 55 20 chr20 19564371 19564517 -52589365 - L1ME LINE L1 -1684 4462 4312 307 339 48 12 chr20 19565679 19565844 -52588038 - L1ME LINE L1 -1949 4197 4027 428 309 100 61 chr20 19566019 19566530 -52587352 - L1ME LINE L1 -2493 3653 3123 472 284 40 37 chr20 19566560 19566856 -52587026 - MARNA DNA Mariner -142 444 148 343 285 119 13 chr20 19568171 19568322 -52585560 - HAL1b LINE L1 -27 1321 1155 30 45 0 0 chr20 19568361 19568405 -52585477 + AT_rich Low_complexity Low_complexity 1 44 0 2257 107 28 6 chr20 19568461 19568817 -52585065 + L1PA16 LINE L1 5801 6164 -2 2166 104 3 0 chr20 19568871 19569160 -52584722 + AluSx SINE Alu 21 310 -2 504 281 82 51 chr20 19569244 19569771 -52584111 - HAL1b LINE L1 -533 815 273 186 43 0 0 chr20 19570835 19570858 -52583024 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2537 48 0 19 chr20 19570941 19571256 -52582626 - AluY SINE Alu -2 309 1 198 0 0 0 chr20 19573383 19573405 -52580477 + (T)n Simple_repeat Simple_repeat 1 22 0 555 281 90 58 chr20 19573433 19573867 -52580015 + MLT1H LTR MaLR 102 549 0 206 338 0 0 chr20 19573870 19573944 -52579938 - MIR SINE MIR -11 251 178 272 371 16 24 chr20 19574237 19574361 -52579521 + L2 LINE L2 2933 3055 -217 1148 184 68 96 chr20 19574369 19574734 -52579148 + MLT1A1 LTR MaLR 1 355 -10 210 320 20 0 chr20 19574826 19574876 -52579006 + L2 LINE L2 3124 3174 -98 * 429 250 128 35 chr20 19574862 19575034 -52578848 + MIR SINE MIR 30 217 -45 24 32 0 0 chr20 19575039 19575070 -52578812 + AT_rich Low_complexity Low_complexity 1 31 0 557 347 50 26 chr20 19575202 19575545 -52578337 + L2 LINE L2 2394 2744 -570 204 67 0 0 chr20 19576465 19576495 -52577387 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 481 317 70 33 chr20 19577867 19578110 -52575772 + MIR SINE MIR 3 254 -8 274 275 44 138 chr20 19578118 19578176 -52575706 + MIR3 SINE MIR 16 78 -130 2092 140 0 19 chr20 19578176 19578483 -52575399 + AluSx SINE Alu 5 307 -5 1095 69 0 0 chr20 19578483 19578628 -52575254 + (GGAA)n Simple_repeat Simple_repeat 4 148 0 274 275 44 138 chr20 19578634 19578735 -52575147 + MIR3 SINE MIR 78 160 -48 231 254 0 16 chr20 19578865 19578928 -52574954 + (TA)n Simple_repeat Simple_repeat 2 63 0 259 265 10 10 chr20 19579970 19580068 -52573814 - Charlie8 DNA MER1_type -2255 162 65 2611 155 17 2 chr20 19580506 19581173 -52572709 + MER72 LTR ERV1 10 718 -4 182 364 11 68 chr20 19582681 19582769 -52571113 - MIR SINE MIR -88 120 38 695 193 122 79 chr20 19583102 19583275 -52570607 + THE1C LTR MaLR 1 165 -210 584 130 0 0 chr20 19583275 19583367 -52570515 - L1PB1 LINE L1 -1 6150 6059 695 193 122 79 chr20 19583367 19583570 -52570312 + THE1C LTR MaLR 165 375 0 338 279 195 32 chr20 19583679 19583833 -52570049 + MIR SINE MIR 36 214 -48 252 0 0 0 chr20 19583993 19584021 -52569861 + (TA)n Simple_repeat Simple_repeat 2 29 0 2456 63 0 3 chr20 19584021 19584320 -52569562 - AluY SINE Alu -13 298 1 256 131 16 33 chr20 19584455 19584516 -52569366 + (CATA)n Simple_repeat Simple_repeat 4 63 0 1805 186 0 25 chr20 19584640 19584957 -52568925 + AluJb SINE Alu 1 309 -3 247 163 0 0 chr20 19585175 19585218 -52568664 + MLT1I LTR MaLR 95 137 -272 246 202 29 6 chr20 19585442 19585524 -52568358 + MLT1G1 LTR MaLR 323 579 -1 190 357 194 0 chr20 19585632 19585730 -52568152 - MIR3 SINE MIR -5 203 87 862 133 0 0 chr20 19585910 19586038 -52567844 + FRAM SINE Alu 47 174 -2 28 0 0 0 chr20 19586038 19586066 -52567816 + AT_rich Low_complexity Low_complexity 1 28 0 6801 130 25 45 chr20 19586398 19586680 -52567202 + Tigger3b DNA MER2_type 2 288 -2740 2211 80 4 0 chr20 19586680 19586992 -52566890 + AluSx SINE Alu 5 317 0 6801 130 25 45 chr20 19586992 19587963 -52565919 + Tigger3b DNA MER2_type 288 1230 -1 336 64 0 0 chr20 19587963 19588010 -52565872 + (CA)n Simple_repeat Simple_repeat 2 48 0 532 365 11 0 chr20 19588637 19588815 -52565067 - MER91B DNA MER1_type -10 180 1 252 179 119 24 chr20 19589207 19589291 -52564591 + MLT1H LTR MaLR 233 324 -225 * 293 241 24 0 chr20 19589289 19589372 -52564510 + MLT1H LTR MaLR 464 548 -1 1832 281 82 24 chr20 19590970 19591738 -52562144 - L2 LINE L2 -203 3110 2305 629 245 25 49 chr20 19593418 19593663 -52560219 - MLT1H LTR MaLR -270 279 41 331 303 123 12 chr20 19593730 19593892 -52559990 + MIR SINE MIR 1 180 -82 228 200 0 0 chr20 19593949 19593999 -52559883 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2115 117 0 0 chr20 19594777 19595083 -52558799 + AluSx SINE Alu 1 306 0 2273 115 3 0 chr20 19596950 19597255 -52556627 - AluSg1 SINE Alu -3 306 1 1927 142 0 16 chr20 19597280 19597583 -52556299 + AluJo SINE Alu 1 298 -14 2192 112 3 3 chr20 19597583 19597888 -52555994 + AluSq SINE Alu 1 305 -8 1441 195 71 55 chr20 19598178 19598542 -52555340 + MLT1A2 LTR MaLR 5 374 0 207 273 154 18 chr20 19600363 19600473 -52553409 - L2 LINE L2 -5 3308 3184 456 263 113 12 chr20 19600894 19600964 -52552918 + MER5A DNA MER1_type 7 69 -120 2032 150 0 0 chr20 19600964 19601257 -52552625 + AluSx SINE Alu 1 293 -19 456 263 113 12 chr20 19601257 19601346 -52552536 + MER5A DNA MER1_type 69 182 -7 1929 99 46 56 chr20 19601478 19601782 -52552100 - AluSx SINE Alu -11 301 1 336 311 18 12 chr20 19602062 19602226 -52551656 - L1M4 LINE L1 -3527 2619 2455 4717 126 24 1 chr20 19602270 19602994 -52550888 + L1PA16 LINE L1 5419 6158 -8 24 0 0 0 chr20 19602994 19603018 -52550864 + AT_rich Low_complexity Low_complexity 1 24 0 236 186 17 0 chr20 19603115 19603174 -52550708 + (TA)n Simple_repeat Simple_repeat 1 60 0 207 0 0 0 chr20 19603806 19603829 -52550053 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2737 190 55 35 chr20 19604833 19605173 -52548709 - L1MA6 LINE L1 0 6300 5922 251 28 28 0 chr20 19605173 19605209 -52548673 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2737 190 55 35 chr20 19605209 19605286 -52548596 - L1MA6 LINE L1 -378 5922 5848 2243 199 8 73 chr20 19605286 19606353 -52547529 - L1MD3 LINE L1 -744 5402 4905 198 197 8 154 chr20 19606667 19606784 -52547098 - L2 LINE L2 -105 3208 3109 324 380 9 0 chr20 19607146 19607254 -52546628 - MIR SINE MIR -62 146 38 360 148 0 0 chr20 19607721 19607782 -52546100 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 1047 253 23 10 chr20 19608227 19608527 -52545355 + L1M4 LINE L1 4050 4353 -1793 2771 242 37 6 chr20 19608670 19609326 -52544556 + MER76 LTR ERV 1 676 -12 1096 276 131 41 chr20 19609349 19610645 -52543237 + L1ME3A LINE L1 3878 5290 -856 553 293 86 21 chr20 19610844 19611124 -52542758 + L1ME3A LINE L1 5615 5912 -258 533 77 0 0 chr20 19611210 19611288 -52542594 + L1PA5 LINE L1 6077 6154 0 419 0 0 19 chr20 19611377 19611429 -52542453 + (TG)n Simple_repeat Simple_repeat 2 52 0 313 256 48 77 chr20 19612074 19612281 -52541601 + L1ME3A LINE L1 5970 6170 0 313 366 57 32 chr20 19612307 19612588 -52541294 - L2 LINE L2 -160 3112 2825 228 67 0 0 chr20 19614173 19614203 -52539679 + (CAAT)n Simple_repeat Simple_repeat 2 31 0 1419 299 76 50 chr20 19614225 19614724 -52539158 - L2 LINE L2 0 3313 2829 2236 95 3 33 chr20 19614724 19615030 -52538852 + AluSc SINE Alu 1 297 -12 1419 299 76 50 chr20 19615030 19615570 -52538312 - L2 LINE L2 -484 2829 2232 874 287 70 9 chr20 19615788 19616159 -52537723 + MLT1J2 LTR MaLR 1 407 -2 185 385 0 0 chr20 19616164 19616216 -52537666 - L2 LINE L2 -23 3249 3198 244 352 127 35 chr20 19616746 19617203 -52536679 + L2 LINE L2 2215 2713 -601 1998 105 70 18 chr20 19617794 19618136 -52535746 - L1MA3 LINE L1 -17 6288 5929 516 50 38 0 chr20 19618183 19618263 -52535619 + (TCCA)n Simple_repeat Simple_repeat 4 86 0 254 296 35 78 chr20 19618600 19618715 -52535167 + L2 LINE L2 3202 3311 -2 225 358 181 4 chr20 19618872 19619115 -52534767 + L2 LINE L2 2305 2590 -724 764 278 0 6 chr20 19619239 19619419 -52534463 + MER8 DNA MER2_type 1 179 -60 338 219 0 16 chr20 19619394 19619458 -52534424 + MER2 DNA MER2_type 282 344 -1 * 183 319 0 0 chr20 19619698 19619745 -52534137 + L2 LINE L2 3008 3054 -218 274 238 230 0 chr20 19619932 19620058 -52533824 - MIR SINE MIR -6 256 102 258 264 0 42 chr20 19620148 19620220 -52533662 + L2 LINE L2 3242 3310 -3 1909 142 7 0 chr20 19620862 19621136 -52532746 + AluSx SINE Alu 1 276 -36 225 0 0 0 chr20 19621143 19621168 -52532714 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 224 250 0 0 chr20 19622449 19622497 -52531385 + MIR SINE MIR 6 53 -209 2830 227 25 83 chr20 19622508 19623671 -52530211 + L1MC1 LINE L1 2893 3987 -2159 16774 210 24 12 chr20 19623907 19624067 -52529815 + L1PA15 LINE L1 1046 1203 -5613 2374 106 0 0 chr20 19624067 19624378 -52529504 + AluSq SINE Alu 1 311 -2 16774 210 24 12 chr20 19624378 19625995 -52527887 + L1PA15 LINE L1 1203 2800 -4016 2223 108 7 0 chr20 19625995 19626291 -52527591 + AluSq SINE Alu 1 298 -15 16774 210 24 12 chr20 19626291 19630151 -52523731 + L1PA15 LINE L1 2800 6764 -52 330 106 30 15 chr20 19630209 19630275 -52523607 + L1PA15 LINE L1 6746 6812 -4 22 0 0 0 chr20 19630275 19630297 -52523585 + AT_rich Low_complexity Low_complexity 1 22 0 6010 199 30 13 chr20 19630395 19631011 -52522871 + L1MC1 LINE L1 3999 4603 -1730 2486 77 0 0 chr20 19631011 19631322 -52522560 - AluY SINE Alu 0 311 1 6010 199 30 13 chr20 19631322 19632999 -52520883 + L1MC1 LINE L1 4603 6324 -9 1205 303 58 41 chr20 19633137 19634371 -52519511 + L1ME3A LINE L1 4888 6144 -26 364 273 159 11 chr20 19634473 19634649 -52519233 + L1ME4a LINE L1 5915 6116 -5 4498 141 4 1 chr20 19635726 19636464 -52517418 + L1MA6 LINE L1 5558 6297 -3 21 0 0 0 chr20 19636464 19636485 -52517397 + AT_rich Low_complexity Low_complexity 1 21 0 1833 107 118 0 chr20 19637841 19638113 -52515769 + AluSx SINE Alu 8 311 -1 627 246 120 20 chr20 19638221 19638568 -52515314 + L2 LINE L2 1718 2169 -1145 21 36 0 0 chr20 19639942 19639970 -52513912 + AT_rich Low_complexity Low_complexity 1 28 0 308 291 30 45 chr20 19640229 19640363 -52513519 + MIR SINE MIR 118 249 -13 181 164 0 33 chr20 19641261 19641322 -52512560 + (TA)n Simple_repeat Simple_repeat 1 59 0 477 50 0 0 chr20 19642090 19642150 -52511732 + (TG)n Simple_repeat Simple_repeat 2 61 0 2003 132 146 13 chr20 19642371 19642561 -52511321 + MSTA LTR MaLR 1 164 -264 204 40 0 0 chr20 19642561 19642586 -52511296 + (TC)n Simple_repeat Simple_repeat 1 25 0 2003 132 146 13 chr20 19642586 19642773 -52511109 + MSTA LTR MaLR 164 428 0 209 370 50 28 chr20 19643150 19643331 -52510551 + MIR SINE MIR 28 212 -50 699 210 176 0 chr20 19643780 19643956 -52509926 + MER58A DNA MER1_type 18 224 0 1584 130 26 39 chr20 19645801 19646108 -52507774 - L1M2 LINE L1 -693 5604 5302 * 1623 157 70 12 chr20 19646105 19646436 -52507446 + L1MA5 LINE L1 5926 6275 -25 1989 148 0 20 chr20 19646439 19646744 -52507138 - AluJo SINE Alu -13 299 1 1672 173 32 4 chr20 19647099 19647377 -52506505 - AluJo SINE Alu -24 288 3 811 178 13 26 chr20 19647378 19647530 -52506352 - AluJo SINE Alu -162 150 1 606 258 175 40 chr20 19647549 19647921 -52505961 + L2 LINE L2 2806 3227 -86 26 0 0 0 chr20 19647965 19647991 -52505891 + AT_rich Low_complexity Low_complexity 1 26 0 370 142 18 0 chr20 19648692 19648758 -52505124 - Tigger4(Zombi) DNA MER2_type 0 2731 270 229 179 0 0 chr20 19648735 19648774 -52505108 - Tigger4(Zombi) DNA MER2_type -2692 39 1 * 205 330 47 66 chr20 19648982 19649088 -52504794 + MIR3 SINE MIR 77 180 -28 228 302 56 24 chr20 19650234 19650360 -52503522 - L1ME LINE L1 -265 5856 5727 694 259 110 35 chr20 19650616 19650933 -52502949 + LTR16C LTR ERVL 149 489 -2 186 283 0 33 chr20 19650967 19651027 -52502855 - MIR SINE MIR -131 77 20 1999 118 0 17 chr20 19651562 19651875 -52502007 + AluSg SINE Alu 1 308 0 1265 211 60 52 chr20 19652372 19652736 -52501146 - MLT1A2 LTR MaLR -7 367 1 834 252 45 36 chr20 19654085 19654418 -52499464 - L1ME3A LINE L1 0 6170 5835 902 221 0 31 chr20 19654574 19654769 -52499113 - MER5A DNA MER1_type 0 189 1 972 135 45 141 chr20 19655243 19655414 -52498468 + MER33 DNA MER1_type 4 125 -2460 1175 83 0 0 chr20 19655414 19655571 -52498311 - L1PA11 LINE L1 0 6174 6018 972 135 45 141 chr20 19655571 19655754 -52498128 + MER33 DNA MER1_type 125 324 0 529 310 60 11 chr20 19656414 19656598 -52497284 + MIR SINE MIR 64 256 -6 188 294 185 17 chr20 19656636 19656755 -52497127 + L2 LINE L2 3165 3303 -10 323 355 24 8 chr20 19656770 19656894 -52496988 - L2 LINE L2 -10 3262 3137 3103 123 14 4 chr20 19657885 19658395 -52495487 - L1MA5A LINE L1 -4 6293 5779 289 180 0 0 chr20 19658469 19658519 -52495363 - 5S rRNA rRNA -70 51 2 2137 110 75 23 chr20 19659129 19659475 -52494407 - THE1B LTR MaLR 0 364 1 405 0 0 0 chr20 19660042 19660087 -52493795 + (TG)n Simple_repeat Simple_repeat 2 46 0 315 264 57 21 chr20 19660501 19660641 -52493241 - MER103 DNA DNA -21 145 1 229 171 0 0 chr20 19661182 19661217 -52492665 + MER5A DNA MER1_type 155 189 0 564 248 52 13 chr20 19662130 19662283 -52491599 - MIR SINE MIR -24 238 80 363 96 0 0 chr20 19662959 19663011 -52490871 + (T)n Simple_repeat Simple_repeat 1 52 0 2276 55 62 0 chr20 19663011 19663318 -52490564 - LTR17 LTR ERV1 -454 326 1 1202 47 0 0 chr20 19663318 19663466 -52490416 - HERV17 LTR ERV1 0 8626 8479 226 275 35 120 chr20 19663684 19663733 -52490149 - L2 LINE L2 -5 3308 3256 4026 192 24 54 chr20 19663733 19664717 -52489165 + LTR5 LTR ERVK 1 955 -14 226 275 35 120 chr20 19664717 19664809 -52489073 - L2 LINE L2 -57 3256 3179 207 244 0 0 chr20 19665020 19665065 -52488817 + GA-rich Low_complexity Low_complexity 3 47 0 370 261 101 36 chr20 19665545 19665683 -52488199 + MIR SINE MIR 8 154 -108 613 295 57 16 chr20 19665765 19666080 -52487802 + L1MC4a LINE L1 5532 5859 -1949 567 294 34 42 chr20 19666167 19666429 -52487453 - MIR SINE MIR 0 262 3 243 203 0 51 chr20 19666555 19666634 -52487248 + L1ME4a LINE L1 5989 6063 -58 259 252 94 31 chr20 19666987 19667146 -52486736 + L1ME4a LINE L1 5949 6117 -4 643 268 12 36 chr20 19667198 19667448 -52486434 + L1ME4a LINE L1 5637 5880 -241 35 78 0 0 chr20 19667531 19667608 -52486274 + AT_rich Low_complexity Low_complexity 1 77 0 12095 138 54 14 chr20 19670667 19670999 -52482883 - Tigger1 DNA MER2_type -151 2267 1950 1907 139 10 17 chr20 19670999 19671300 -52482582 + AluSq SINE Alu 1 299 -14 12095 138 54 14 chr20 19671300 19673145 -52480737 - Tigger1 DNA MER2_type -468 1950 2 258 105 0 0 chr20 19673625 19673663 -52480219 + (TA)n Simple_repeat Simple_repeat 1 38 0 183 156 0 0 chr20 19674704 19674736 -52479146 + (TA)n Simple_repeat Simple_repeat 2 33 0 272 118 10 59 chr20 19674870 19674972 -52478910 + (TA)n Simple_repeat Simple_repeat 2 98 0 222 239 15 0 chr20 19674994 19675061 -52478821 + (TA)n Simple_repeat Simple_repeat 2 69 0 324 196 12 42 chr20 19675081 19675249 -52478633 + (TA)n Simple_repeat Simple_repeat 1 163 0 653 324 92 20 chr20 19675424 19675717 -52478165 + L2 LINE L2 2992 3305 -8 312 296 0 0 chr20 19676292 19676363 -52477519 + (CGTG)n Simple_repeat Simple_repeat 1 71 0 1997 116 32 4 chr20 19676403 19676728 -52477154 + AluSx SINE Alu 1 333 0 563 268 54 17 chr20 19678938 19679353 -52474529 + MLT1H1 LTR MaLR 5 470 -85 1779 157 3 20 chr20 19679733 19680033 -52473849 - AluJo SINE Alu -17 295 1 327 195 7 162 chr20 19682239 19682393 -52471489 + MLT1H1 LTR MaLR 420 549 0 554 286 84 25 chr20 19682663 19682866 -52471016 - MIR SINE MIR 0 262 48 924 206 105 49 chr20 19683151 19683437 -52470445 - L1MC4 LINE L1 -140 7902 7601 210 143 0 0 chr20 19683534 19683569 -52470313 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 421 221 57 49 chr20 19683866 19683988 -52469894 - MIR SINE MIR -67 141 19 219 304 109 0 chr20 19684040 19684132 -52469750 + L2 LINE L2 3199 3300 -13 901 285 115 57 chr20 19684374 19685043 -52468839 + L2 LINE L2 2580 3312 -1 215 342 13 13 chr20 19686148 19686224 -52467658 - MIR SINE MIR -94 114 39 594 237 112 12 chr20 19687715 19687884 -52465998 - MER5A DNA MER1_type -3 186 1 2804 65 8 0 chr20 19687885 19688237 -52465645 + THE1A LTR MaLR 1 355 0 227 321 25 0 chr20 19688511 19688592 -52465290 - L2 LINE L2 0 3313 3231 1120 199 60 35 chr20 19688835 19689151 -52464731 + MER33 DNA MER1_type 1 324 0 1099 269 46 19 chr20 19689304 19689672 -52464210 + LTR16C LTR ERVL 102 479 -12 280 345 23 89 chr20 19689740 19689998 -52463884 - L2 LINE L2 -161 3111 2871 187 400 40 0 chr20 19690552 19690677 -52463205 - MIR SINE MIR -82 180 51 2129 123 3 3 chr20 19691637 19691939 -52461943 - AluSg SINE Alu -8 302 1 781 177 188 0 chr20 19694313 19694494 -52459388 + MER58C DNA MER1_type 1 215 0 1014 233 32 45 chr20 19694859 19695173 -52458709 + MLT1F1 LTR MaLR 3 312 -255 2402 232 30 77 chr20 19695936 19696791 -52457091 + MER21B LTR ERV1 1 815 -48 291 321 9 9 chr20 19696819 19696925 -52456957 - MIR SINE MIR -40 222 117 187 213 0 115 chr20 19697487 19697548 -52456334 - L2 LINE L2 0 3272 3219 183 80 0 0 chr20 19698217 19698242 -52455640 + (TAA)n Simple_repeat Simple_repeat 2 26 0 362 229 280 25 chr20 19698350 19698468 -52455414 - MIR SINE MIR -113 149 2 22 0 0 0 chr20 19698560 19698582 -52455300 + AT_rich Low_complexity Low_complexity 1 22 0 1192 121 0 0 chr20 19699357 19699531 -52454351 - AluSp SINE Alu 0 313 140 507 309 95 75 chr20 19700090 19700491 -52453391 + MLT1K LTR MaLR 31 439 -149 210 228 35 0 chr20 19700625 19700682 -52453200 - MER5B DNA MER1_type -2 176 118 333 0 0 0 chr20 19700962 19700999 -52452883 + (CA)n Simple_repeat Simple_repeat 2 38 0 2786 16 0 0 chr20 19701571 19701878 -52452004 + AluYa5 SINE Alu 1 307 -4 775 248 149 78 chr20 19701916 19702432 -52451450 + MLT1G1 LTR MaLR 6 558 -37 772 267 121 23 chr20 19702852 19703200 -52450682 - LTR33 LTR ERVL -6 515 134 750 189 11 23 chr20 19703276 19703451 -52450431 + MER106A DNA MER1_type 63 235 -1 415 247 11 0 chr20 19704183 19704276 -52449606 + L1MC4a LINE L1 6676 6769 -1039 264 221 0 0 chr20 19704279 19704347 -52449535 + L1MC4 LINE L1 7022 7089 -953 2136 255 29 14 chr20 19704351 19705005 -52448877 + L1MC4 LINE L1 7238 7901 -141 290 238 24 12 chr20 19706141 19706225 -52447657 + MIR3 SINE MIR 123 207 -1 2290 71 37 0 chr20 19706436 19706780 -52447102 - AluY SINE Alu 0 355 1 966 106 0 0 chr20 19707072 19707204 -52446678 + FLAM_C SINE Alu 1 132 -1 1280 268 80 58 chr20 19707409 19707729 -52446153 + L2 LINE L2 2459 2770 -543 697 211 63 6 chr20 19707729 19707904 -52445978 + MER5A DNA MER1_type 1 185 -4 1280 268 80 58 chr20 19707904 19708062 -52445820 + L2 LINE L2 2770 2940 -373 1297 106 247 0 chr20 19708062 19708297 -52445585 - AluSx SINE Alu -9 293 1 1280 268 80 58 chr20 19708297 19708408 -52445474 + L2 LINE L2 2940 3047 -266 1173 216 59 4 chr20 19708545 19708818 -52445064 - MLT1F LTR MaLR -133 409 122 443 246 45 0 chr20 19708815 19708949 -52444933 + MLT1F1 LTR MaLR 425 564 -3 * 244 281 7 126 chr20 19709045 19709180 -52444702 + L2 LINE L2 3192 3310 -3 317 250 0 36 chr20 19709332 19709416 -52444466 - Charlie1 DNA MER1_type -2679 82 2 1411 191 107 21 chr20 19709710 19710093 -52443789 - MER47B DNA MER2_type -2 416 1 217 381 48 0 chr20 19710440 19710566 -52443316 - MIR SINE MIR -41 221 90 326 264 47 23 chr20 19710635 19710764 -52443118 + MER94 DNA DNA 2 133 -1 33 43 0 0 chr20 19711447 19711494 -52442388 + AT_rich Low_complexity Low_complexity 1 47 0 302 240 0 80 chr20 19712032 19712132 -52441750 - L1MC4 LINE L1 -1336 6706 6615 185 281 0 9 chr20 19712140 19712254 -52441628 + (CATA)n Simple_repeat Simple_repeat 3 115 0 313 303 11 0 chr20 19712264 19712353 -52441529 + L1MC4 LINE L1 6614 6703 -1339 393 220 6 39 chr20 19712355 19712537 -52441345 + (TA)n Simple_repeat Simple_repeat 2 177 0 610 211 143 6 chr20 19712708 19712816 -52441066 - MER5A DNA MER1_type -5 184 46 2236 95 0 3 chr20 19712816 19713110 -52440772 - AluSx SINE Alu -5 307 15 610 211 143 6 chr20 19713110 19713162 -52440720 - MER5A DNA MER1_type -143 46 2 265 287 98 0 chr20 19713475 19713649 -52440233 + L1MEd LINE L1 660 850 -5269 477 292 115 19 chr20 19713670 19714259 -52439623 + L1MEd LINE L1 895 1588 -4722 1253 199 12 4 chr20 19715472 19715878 -52438004 + LTR32 LTR ERVL 15 471 0 314 275 179 60 chr20 19717252 19717503 -52436379 + LTR16B LTR ERVL 34 314 -150 240 86 0 0 chr20 19717698 19717733 -52436149 + U2 snRNA snRNA 1 35 -153 249 346 0 0 chr20 19719107 19719188 -52434694 + L2 LINE L2 2237 2317 -997 481 143 61 10 chr20 19719195 19719293 -52434589 + LTR33 LTR ERVL 6 108 -413 235 272 88 35 chr20 19719358 19719472 -52434410 + LTR33 LTR ERVL 235 354 -167 1090 308 99 37 chr20 19719569 19720454 -52433428 + L2 LINE L2 2325 3269 -44 422 281 261 10 chr20 19721899 19722098 -52431784 + MIR SINE MIR 8 256 -6 506 273 76 15 chr20 19722101 19722299 -52431583 - MER63A DNA MER1_type 0 210 1 725 288 123 19 chr20 19723213 19723414 -52430468 - LTR16C LTR ERVL 0 491 246 1405 153 41 47 chr20 19723414 19723734 -52430148 + MER33 DNA MER1_type 3 320 -4 725 288 123 19 chr20 19723734 19723841 -52430041 - LTR16C LTR ERVL -245 246 151 348 335 171 25 chr20 19724066 19724382 -52429500 + L3 LINE CR1 1192 1553 -24 366 268 153 20 chr20 19724479 19724679 -52429203 - MIR SINE MIR -3 259 38 691 311 93 18 chr20 19724824 19725212 -52428670 + MLT1G3 LTR MaLR 1 427 -168 2075 164 19 6 chr20 19726299 19726659 -52427223 + MLT1A1 LTR MaLR 1 365 0 762 265 25 49 chr20 19727204 19727449 -52426433 + MIR SINE MIR 24 262 0 190 382 114 24 chr20 19727494 19727617 -52426265 + L2 LINE L2 3134 3267 -5 21 0 0 0 chr20 19728075 19728096 -52425786 + AT_rich Low_complexity Low_complexity 1 21 0 183 356 0 46 chr20 19728230 19728317 -52425565 - L2 LINE L2 -2 3311 3229 198 91 0 0 chr20 19728327 19728360 -52425522 + (T)n Simple_repeat Simple_repeat 1 33 0 247 290 11 54 chr20 19728633 19728726 -52425156 + MIR SINE MIR 11 99 -163 2150 221 58 9 chr20 19728761 19729296 -52424586 + LTR48B LTR ERV1 80 640 -4 401 176 267 15 chr20 19729296 19729427 -52424455 + MIR SINE MIR 96 259 -3 2553 175 45 111 chr20 19729435 19730213 -52423669 + LTR8A LTR ERV1 1 727 0 299 346 16 85 chr20 19730303 19730529 -52423353 - L2 LINE L2 -91 3181 2980 1197 250 70 62 chr20 19730529 19731013 -52422869 + LTR16C LTR ERVL 4 491 0 299 346 16 85 chr20 19731013 19731092 -52422790 - L2 LINE L2 -292 2980 2897 1615 217 45 75 chr20 19731190 19731725 -52422157 + MLT2B1 LTR ERVL 2 520 0 735 221 147 0 chr20 19732872 19733035 -52420847 + MER5A DNA MER1_type 3 189 0 312 307 99 36 chr20 19734036 19734228 -52419654 - L2 LINE L2 -864 2450 2247 6360 56 11 1 chr20 19734452 19735267 -52418615 + L1PA5 LINE L1 5326 6148 -6 321 89 0 0 chr20 19735267 19735312 -52418570 + (TA)n Simple_repeat Simple_repeat 1 45 0 1675 193 49 65 chr20 19736155 19736667 -52417215 - MLT1D LTR MaLR -1 504 1 6132 60 3 1 chr20 19736711 19737488 -52416394 + L1PA6 LINE L1 5377 6154 0 240 184 0 0 chr20 19737673 19737722 -52416160 + CT-rich Low_complexity Low_complexity 3 51 0 315 296 71 18 chr20 19737776 19738114 -52415768 + L1ME4a LINE L1 5188 5309 -837 440 240 153 63 chr20 19738225 19738525 -52415357 + L1ME4a LINE L1 5573 5899 -222 290 256 12 12 chr20 19738850 19738932 -52414950 - MIR SINE MIR -123 139 58 239 270 63 56 chr20 19739352 19739478 -52414404 + MIR SINE MIR 56 182 -80 192 208 113 38 chr20 19739914 19739967 -52413915 + L2 LINE L2 3243 3299 -14 2331 101 3 0 chr20 19740210 19740508 -52413374 - AluSg SINE Alu -11 299 1 1167 212 166 14 chr20 19740635 19740979 -52412903 - MSTD LTR MaLR 0 396 1 306 0 0 0 chr20 19741138 19741172 -52412710 + (TAA)n Simple_repeat Simple_repeat 2 35 0 29 47 0 0 chr20 19741970 19742013 -52411869 + AT_rich Low_complexity Low_complexity 1 43 0 252 0 0 0 chr20 19742139 19742167 -52411715 + (TC)n Simple_repeat Simple_repeat 2 29 0 207 0 0 0 chr20 19742166 19742189 -52411693 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 1514 194 0 63 chr20 19742308 19742627 -52411255 + AluJo SINE Alu 1 299 -13 929 150 52 56 chr20 19743304 19743517 -52410365 - MER20 DNA MER1_type -7 212 1 1900 199 16 0 chr20 19744089 19744471 -52409411 + MLT1B LTR MaLR 3 390 0 308 87 0 0 chr20 19744890 19744936 -52408946 - MER73 LTR ERVL 0 644 599 1398 186 87 36 chr20 19744973 19745272 -52408610 - AluJo SINE Alu 0 313 1 3040 171 27 13 chr20 19745273 19745875 -52408007 - MER73 LTR ERVL -34 610 1 231 271 34 34 chr20 19745877 19745995 -52407887 + MIR SINE MIR 143 260 -2 219 196 11 65 chr20 19746001 19746093 -52407789 + (TTA)n Simple_repeat Simple_repeat 2 88 0 188 146 0 62 chr20 19747304 19747352 -52406530 + (GGAGAA)n Simple_repeat Simple_repeat 3 47 0 326 289 53 59 chr20 19748253 19748440 -52405442 - MIR3 SINE MIR 0 208 23 222 37 0 0 chr20 19748821 19748848 -52405034 + (TG)n Simple_repeat Simple_repeat 2 28 0 253 242 0 22 chr20 19750119 19750211 -52403671 + L1ME2 LINE L1 5848 5939 -231 1818 167 53 0 chr20 19750249 19750590 -52403292 + MER93b LTR ERV1 1 359 -14 21 57 0 0 chr20 19750772 19750807 -52403075 + AT_rich Low_complexity Low_complexity 1 35 0 265 232 0 0 chr20 19751148 19751204 -52402678 + (TG)n Simple_repeat Simple_repeat 1 56 0 1878 115 0 0 chr20 19751241 19751502 -52402380 - AluY SINE Alu -6 305 45 379 260 29 10 chr20 19751915 19752019 -52401863 + MLT1G1 LTR MaLR 1 106 -489 424 174 0 0 chr20 19752019 19752088 -52401794 + Tigger2 DNA MER2_type 1 69 -2649 * 2619 117 33 2 chr20 19752086 19752512 -52401370 + Tigger2 DNA MER2_type 2280 2718 0 380 248 106 10 chr20 19752520 19752656 -52401226 + MLT1G1 LTR MaLR 75 278 -317 342 207 171 0 chr20 19753359 19753441 -52400441 - FLAM_A SINE Alu -15 118 23 239 346 70 12 chr20 19753502 19753665 -52400217 + MIR3 SINE MIR 33 203 -5 708 283 95 39 chr20 19753704 19754188 -52399694 + MLT2F LTR ERVL 60 570 -93 519 266 40 6 chr20 19754176 19754353 -52399529 + MLT2E LTR ERVL 443 625 -3 * 300 258 0 0 chr20 19754737 19754799 -52399083 + L2 LINE L2 3194 3255 -17 2313 236 46 28 chr20 19755218 19755871 -52398011 + L1ME3A LINE L1 5501 6165 -5 1327 247 88 88 chr20 19756752 19757399 -52396483 - MLT1E3 LTR MaLR -6 618 2 454 241 65 0 chr20 19757412 19757520 -52396362 + MIR SINE MIR 34 148 -114 2015 211 82 24 chr20 19757534 19758084 -52395798 - MLT1E3 LTR MaLR -41 583 2 215 276 35 0 chr20 19758113 19758171 -52395711 + MIR SINE MIR 197 256 -6 213 39 0 0 chr20 19758360 19758386 -52395496 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1089 191 0 25 chr20 19758389 19758593 -52395289 - AluJo SINE Alu -30 282 84 637 268 69 50 chr20 19759484 19759717 -52394165 + LTR16A LTR ERVL 16 262 -188 2204 172 8 5 chr20 19759717 19760106 -52393776 + MLT1B LTR MaLR 1 390 0 637 268 69 50 chr20 19760106 19760293 -52393589 + LTR16A LTR ERVL 262 444 -6 409 271 169 27 chr20 19760961 19761186 -52392696 + LTR16C LTR ERVL 77 333 -158 398 169 0 0 chr20 19761236 19761301 -52392581 + LTR16C LTR ERVL 425 489 -2 195 100 0 0 chr20 19762240 19762270 -52391612 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 37 0 0 chr20 19763178 19763205 -52390677 + (GA)n Simple_repeat Simple_repeat 1 27 0 224 250 0 26 chr20 19763509 19763585 -52390297 + A-rich Low_complexity Low_complexity 4 77 0 299 311 98 30 chr20 19765493 19765657 -52388225 + MIR SINE MIR 88 262 0 199 341 54 23 chr20 19765945 19766074 -52387808 - MER5A DNA MER1_type -3 186 54 584 204 102 13 chr20 19766127 19766284 -52387598 - MLT1C LTR MaLR -291 176 6 583 321 77 9 chr20 19766760 19766981 -52386901 + MIR SINE MIR 19 254 -8 190 343 30 75 chr20 19768272 19768406 -52385476 - MIR3 SINE MIR -77 131 4 357 109 0 0 chr20 19768604 19768659 -52385223 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 2498 148 31 9 chr20 19769633 19770052 -52383830 + MSTA LTR MaLR 1 428 0 586 287 15 26 chr20 19771306 19771501 -52382381 - MIR SINE MIR 0 262 70 284 316 14 22 chr20 19771863 19772002 -52381880 - MLT1H LTR MaLR -304 245 108 201 283 19 0 chr20 19772101 19772154 -52381728 - MIR SINE MIR -206 56 3 21 57 0 0 chr20 19774749 19774784 -52379098 + AT_rich Low_complexity Low_complexity 1 35 0 291 284 39 10 chr20 19775451 19775553 -52378329 - MIR SINE MIR -36 226 122 320 251 66 3 chr20 19775595 19775694 -52378188 + MIR SINE MIR 48 154 -62 21 95 0 0 chr20 19775710 19775773 -52378109 + AT_rich Low_complexity Low_complexity 1 63 0 1136 269 60 21 chr20 19776053 19776562 -52377320 - MLT1F LTR MaLR 0 567 1 1153 110 0 0 chr20 19776997 19777183 -52376699 - AluSg/x SINE Alu 0 313 128 273 306 75 17 chr20 19777282 19777455 -52376427 - MIR3 SINE MIR -3 205 23 197 291 35 23 chr20 19778526 19778612 -52375270 - MER5B DNA MER1_type -4 174 88 382 322 89 8 chr20 19778779 19779015 -52374867 + LTR33A LTR ERVL 163 417 -106 1334 141 47 0 chr20 19783098 19783354 -52370528 - L1MA7 LINE L1 0 6291 6024 222 371 40 33 chr20 19785268 19785419 -52368463 + L3 LINE CR1 1378 1529 -48 743 129 0 0 chr20 19785764 19785880 -52368002 + AluY SINE Alu 195 310 -1 432 267 132 7 chr20 19785954 19786234 -52367648 - MLT1H1 LTR MaLR -253 330 7 256 257 114 9 chr20 19786484 19786589 -52367293 - L2 LINE L2 -1 3271 3156 222 128 0 0 chr20 19787071 19787110 -52366772 + (CA)n Simple_repeat Simple_repeat 2 40 0 414 0 0 0 chr20 19788046 19788092 -52365790 + (CA)n Simple_repeat Simple_repeat 2 47 0 1718 161 58 15 chr20 19789478 19789808 -52364074 + MER2 DNA MER2_type 1 344 0 35 24 0 0 chr20 19789961 19790003 -52363879 + AT_rich Low_complexity Low_complexity 1 42 0 339 222 148 0 chr20 19790225 19790333 -52363549 + L1M4 LINE L1 5138 5261 -885 1839 146 18 4 chr20 19790878 19791152 -52362730 + AluJb SINE Alu 3 280 -32 1722 227 33 14 chr20 19791327 19791811 -52362071 - L1MA9 LINE L1 -38 6274 5782 593 163 9 14 chr20 19791814 19792174 -52361708 + (TA)n Simple_repeat Simple_repeat 1 357 0 794 218 24 0 chr20 19792180 19792350 -52361532 - L1MA9 LINE L1 -527 5785 5612 192 256 0 0 chr20 19792357 19792400 -52361482 + MIR SINE MIR 46 88 -174 194 310 115 118 chr20 19792418 19792632 -52361250 - L2 LINE L2 -1 3271 3057 3988 148 0 2 chr20 19792632 19793266 -52360616 + MER41B LTR ERV1 3 635 0 194 310 115 118 chr20 19793266 19793451 -52360431 - L2 LINE L2 -215 3057 2873 212 215 0 31 chr20 19795294 19795359 -52358523 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 213 235 20 20 chr20 19796472 19796523 -52357359 - L2 LINE L2 -5 3267 3217 995 275 63 57 chr20 19796732 19797220 -52356662 - LTR16C LTR ERVL 0 491 1 209 281 18 0 chr20 19797244 19797301 -52356581 + CT-rich Low_complexity Low_complexity 3 60 0 1813 169 0 14 chr20 19797582 19797872 -52356010 - AluJo SINE Alu -26 286 1 195 315 0 19 chr20 19799115 19799169 -52354713 - L2 LINE L2 -4 3268 3216 202 384 122 22 chr20 19799356 19799627 -52354255 + L2 LINE L2 2808 3105 -167 6731 23 0 3 chr20 19799919 19800856 -52353026 - L1PA4 LINE L1 -653 5502 4567 5622 23 0 0 chr20 19800856 19801504 -52352378 + L1PA4 LINE L1 5507 6155 0 6731 23 0 3 chr20 19801504 19801519 -52352363 - L1P1 LINE L1 -1588 4567 4553 2294 181 19 7 chr20 19801610 19802035 -52351847 + MSTB1 LTR MaLR 1 430 -2 428 298 71 53 chr20 19802060 19802285 -52351597 - L2 LINE L2 -422 2892 2664 1572 187 114 26 chr20 19803112 19803534 -52350348 - LTR2B LTR ERV1 0 490 32 1096 203 62 3 chr20 19803576 19803882 -52350000 - MER33 DNA MER1_type 0 324 1 2439 80 3 0 chr20 19805592 19805892 -52347990 + AluSp SINE Alu 1 301 -12 1199 292 51 22 chr20 19806205 19806616 -52347266 - LTR16C LTR ERVL 0 491 69 2984 191 24 20 chr20 19808071 19808815 -52345067 - L1 LINE L1 -2365 3781 3035 * 5123 179 20 5 chr20 19808801 19809873 -52344009 + L1 LINE L1 3773 4860 -1286 5712 23 0 0 chr20 19810163 19810778 -52343104 - SVA Other Other -1 1385 771 2191 169 24 11 chr20 19810778 19811240 -52342642 + L1 LINE L1 4845 5312 -834 627 243 147 39 chr20 19813812 19814336 -52339546 - MLT1G LTR MaLR -2 588 1 534 212 53 71 chr20 19814459 19814506 -52339376 - MER63A DNA MER1_type -1478 210 164 2315 120 0 0 chr20 19814506 19814805 -52339077 - AluSx SINE Alu -13 299 1 534 212 53 71 chr20 19814805 19814944 -52338938 - MER63A DNA MER1_type -1524 164 26 24 0 0 0 chr20 19815115 19815139 -52338743 + AT_rich Low_complexity Low_complexity 1 24 0 2063 62 0 0 chr20 19815152 19815395 -52338487 + AluY SINE Alu 53 295 -16 910 188 0 0 chr20 19815395 19815539 -52338343 - FRAM SINE Alu -32 144 1 251 337 0 23 chr20 19815545 19815631 -52338251 + MIR SINE MIR 26 109 -153 2160 101 7 0 chr20 19815685 19815971 -52337911 - AluSc SINE Alu -21 288 1 396 0 0 0 chr20 19816054 19816098 -52337784 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 440 48 16 0 chr20 19818979 19819042 -52334840 + (CA)n Simple_repeat Simple_repeat 2 65 0 184 284 95 77 chr20 19819349 19819634 -52334248 + L2 LINE L2 2933 3222 -91 * 321 244 259 7 chr20 19819610 19819745 -52334137 + MER5A DNA MER1_type 15 183 -6 539 181 245 0 chr20 19819775 19819930 -52333952 - MER3 DNA MER1_type -8 201 9 644 271 133 52 chr20 19820454 19820639 -52333243 - MLT1K LTR MaLR -25 563 394 2421 98 49 9 chr20 19820639 19820987 -52332895 - THE1B LTR MaLR -2 362 1 644 271 133 52 chr20 19820987 19821321 -52332561 - MLT1K LTR MaLR -194 394 2 204 40 0 0 chr20 19821345 19821370 -52332512 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 378 0 0 0 chr20 19821376 19821418 -52332464 + (TG)n Simple_repeat Simple_repeat 2 43 0 546 259 180 53 chr20 19822328 19822800 -52331082 + MLT1H LTR MaLR 18 549 0 192 299 122 56 chr20 19822852 19822959 -52330923 - MIR SINE MIR -76 132 19 671 219 110 0 chr20 19823710 19823874 -52330008 + MIR SINE MIR 71 252 -10 248 265 73 0 chr20 19824657 19824725 -52329157 + MIR3 SINE MIR 115 187 -21 330 233 75 8 chr20 19824847 19824967 -52328915 + L1MC4 LINE L1 7095 7222 -820 6840 141 79 19 chr20 19875065 19875977 -52277905 + Tigger1 DNA MER2_type 948 1956 -462 1885 139 10 17 chr20 19875977 19876278 -52277604 - AluSq SINE Alu -14 299 1 6840 141 79 19 chr20 19876278 19876610 -52277272 + Tigger1 DNA MER2_type 1956 2267 -151 35 78 0 0 chr20 19879669 19879746 -52274136 + AT_rich Low_complexity Low_complexity 1 77 0 709 273 14 42 chr20 19879829 19880118 -52273764 - L1ME4a LINE L1 -241 5880 5600 298 252 94 31 chr20 19880131 19880290 -52273592 - L1ME4a LINE L1 -4 6117 5949 264 203 0 51 chr20 19880643 19880722 -52273160 - L1ME4a LINE L1 -58 6063 5989 572 294 34 42 chr20 19880848 19881110 -52272772 + MIR SINE MIR 3 262 0 701 295 57 16 chr20 19881197 19881512 -52272370 - L1MC4a LINE L1 -1949 5859 5532 367 261 101 36 chr20 19881594 19881732 -52272150 - MIR SINE MIR -108 154 8 207 244 0 0 chr20 19882212 19882257 -52271625 + CT-rich Low_complexity Low_complexity 3 47 0 223 275 35 120 chr20 19882468 19882560 -52271322 + L2 LINE L2 3179 3256 -57 3871 190 25 55 chr20 19882560 19883544 -52270338 - LTR5 LTR ERVK -14 955 1 223 275 35 120 chr20 19883544 19883593 -52270289 + L2 LINE L2 3256 3308 -5 1257 63 19 0 chr20 19883801 19883959 -52269923 + HERV17 LTR ERV1 8466 8626 0 2394 55 62 0 chr20 19883959 19884266 -52269616 + LTR17 LTR ERV1 1 326 -454 354 98 0 0 chr20 19884266 19884317 -52269565 + (A)n Simple_repeat Simple_repeat 1 51 0 568 248 52 13 chr20 19884993 19885146 -52268736 + MIR SINE MIR 80 238 -24 228 171 0 0 chr20 19886059 19886094 -52267788 - MER5A DNA MER1_type 0 189 155 352 264 57 21 chr20 19886635 19886775 -52267107 + MER103 DNA DNA 1 145 -21 405 0 0 0 chr20 19887189 19887234 -52266648 + (CA)n Simple_repeat Simple_repeat 2 46 0 2126 116 72 20 chr20 19887801 19888147 -52265735 + THE1B LTR MaLR 1 364 0 307 180 0 0 chr20 19888757 19888807 -52265075 + 5S rRNA rRNA 2 51 -70 3132 123 14 4 chr20 19888881 19889391 -52264491 + L1MA5A LINE L1 5779 6293 -4 325 355 24 8 chr20 19890382 19890506 -52263376 + L2 LINE L2 3137 3262 -10 195 294 185 17 chr20 19890521 19890640 -52263242 - L2 LINE L2 -10 3303 3165 529 310 60 11 chr20 19890678 19890862 -52263020 - MIR SINE MIR -6 256 64 1063 135 45 141 chr20 19891522 19891705 -52262177 - MER33 DNA MER1_type -2261 324 190 1176 83 0 0 chr20 19891705 19891862 -52262020 + L1PA11 LINE L1 6018 6174 0 1063 135 45 141 chr20 19891862 19892033 -52261849 - MER33 DNA MER1_type -2395 190 4 884 221 0 31 chr20 19892507 19892702 -52261180 + MER5A DNA MER1_type 1 189 0 920 252 45 36 chr20 19892858 19893191 -52260691 + L1ME3A LINE L1 5835 6170 0 1377 211 60 52 chr20 19894540 19894904 -52258978 + MLT1A2 LTR MaLR 1 367 -7 1990 118 0 17 chr20 19895401 19895714 -52258168 - AluSg SINE Alu 0 308 1 184 283 0 33 chr20 19896249 19896309 -52257573 + MIR SINE MIR 20 77 -131 766 239 113 73 chr20 19896343 19896741 -52257141 - LTR16C LTR ERVL -2 489 76 228 302 56 24 chr20 19896916 19897042 -52256840 + L1ME LINE L1 5727 5856 -265 205 330 47 66 chr20 19898188 19898294 -52255588 - MIR3 SINE MIR -28 180 77 229 179 0 0 chr20 19898502 19898541 -52255341 + Tigger4(Zombi) DNA MER2_type 1 39 -2692 * 370 142 18 0 chr20 19898518 19898584 -52255298 + Tigger4(Zombi) DNA MER2_type 270 2731 0 357 309 83 30 chr20 19899282 19899547 -52254335 + MARNA DNA Mariner 177 455 -131 1920 166 42 28 chr20 19900108 19900464 -52253418 - MLT1A1 LTR MaLR 0 365 5 603 242 38 6 chr20 19900928 19901085 -52252797 + MER104 DNA Tc2 15 176 -4 26 30 0 0 chr20 19901464 19901497 -52252385 + AT_rich Low_complexity Low_complexity 1 33 0 505 211 15 75 chr20 19902261 19902345 -52251537 + L2 LINE L2 3187 3262 -51 1497 219 3 0 chr20 19902345 19902628 -52251254 + AluJo SINE Alu 4 287 -25 505 211 15 75 chr20 19902628 19902676 -52251206 + L2 LINE L2 3262 3311 -2 180 0 0 0 chr20 19903564 19903584 -52250298 + (A)n Simple_repeat Simple_repeat 1 20 0 433 371 84 33 chr20 19903833 19904380 -52249502 + HAL1 LINE L1 1188 1762 -745 21 0 0 0 chr20 19904724 19904745 -52249137 + AT_rich Low_complexity Low_complexity 1 21 0 236 322 0 0 chr20 19904764 19904851 -52249031 + A-rich Low_complexity Low_complexity 1 87 0 267 286 54 12 chr20 19904924 19905092 -52248790 + (CGAAA)n Simple_repeat Simple_repeat 3 177 0 415 262 0 0 chr20 19905265 19905368 -52248514 + MLT1G1 LTR MaLR 481 583 -12 213 273 0 23 chr20 19906258 19906302 -52247580 + MER5A DNA MER1_type 17 59 -130 946 221 0 0 chr20 19906374 19906546 -52247336 + MER5A DNA MER1_type 17 188 -1 594 196 152 0 chr20 19906558 19906696 -52247186 + MER5B DNA MER1_type 16 174 -4 307 140 0 70 chr20 19906714 19906771 -52247111 + MER5A DNA MER1_type 7 59 -130 398 253 253 27 chr20 19909617 19909878 -52244004 + MLT1L LTR MaLR 215 534 -81 220 300 33 0 chr20 19909882 19909972 -52243910 - L2 LINE L2 0 3313 3221 840 323 86 49 chr20 19910154 19911377 -52242505 + L2 LINE L2 1932 3247 -25 460 271 60 57 chr20 19911602 19912056 -52241826 + L1MCa LINE L1 1096 1746 -4975 35 24 0 0 chr20 19912056 19912098 -52241784 + AT_rich Low_complexity Low_complexity 1 42 0 235 167 83 0 chr20 19912098 19912170 -52241712 + L1MCa LINE L1 1665 1742 -4798 362 255 132 49 chr20 19912191 19912419 -52241463 + L1MCa LINE L1 1835 2040 -4500 1085 254 96 3 chr20 19912643 19913231 -52240651 + L1MEc LINE L1 163 833 -5563 1023 215 203 62 chr20 19913232 19913390 -52240492 + LTR40b LTR ERVL 1 135 -327 2634 102 6 3 chr20 19913390 19913753 -52240129 + THE1B LTR MaLR 1 364 0 1023 215 203 62 chr20 19913753 19913999 -52239883 + LTR40b LTR ERVL 135 462 0 1106 298 27 18 chr20 19914000 19914672 -52239210 + L1MEc LINE L1 831 1508 -4888 2137 120 6 28 chr20 19914678 19914995 -52238887 + AluSx SINE Alu 1 310 -2 248 205 103 51 chr20 19915014 19915131 -52238751 + L1ME3A LINE L1 5825 5947 -223 264 266 0 16 chr20 19915391 19915455 -52238427 + GA-rich Low_complexity Low_complexity 3 65 0 24 0 0 0 chr20 19915625 19915649 -52238233 + AT_rich Low_complexity Low_complexity 1 24 0 225 292 44 0 chr20 19916327 19916464 -52237418 + L1P LINE L1 4906 5048 -1098 2143 107 9 3 chr20 19916475 19916820 -52237062 + L1MC1 LINE L1 5800 6146 -187 453 138 23 11 chr20 19916822 19916909 -52236973 + L1MC1 LINE L1 6246 6333 0 227 256 51 15 chr20 19917200 19917337 -52236545 + L1ME3 LINE L1 5289 5430 -740 295 302 140 22 chr20 19917416 19917774 -52236108 + L1ME3 LINE L1 5520 5919 -202 22 0 0 0 chr20 19917962 19917984 -52235898 + AT_rich Low_complexity Low_complexity 1 22 0 195 286 54 0 chr20 19919528 19919584 -52234298 - MIR SINE MIR -126 136 78 342 231 10 39 chr20 19919874 19919978 -52233904 + L1ME3 LINE L1 6056 6156 -6 188 294 87 11 chr20 19920082 19920174 -52233708 + MIR SINE MIR 149 247 -15 617 236 134 0 chr20 19920202 19920359 -52233523 - MER5A DNA MER1_type 0 189 12 797 172 103 116 chr20 19920488 19920790 -52233092 + LTR21A LTR ERV1 189 486 -19 308 272 195 31 chr20 19921296 19921557 -52232325 - MLT1I LTR MaLR -13 396 93 4110 33 21 0 chr20 19922017 19922497 -52231385 - LTR2B LTR ERV1 0 490 1 22482 123 11 6 chr20 19922497 19923533 -52230349 - Harlequin LTR ERV1 0 6896 5867 219 36 0 0 chr20 19923533 19923561 -52230321 + (TTG)n Simple_repeat Simple_repeat 2 29 0 22482 123 11 6 chr20 19923561 19926050 -52227832 - Harlequin LTR ERV1 -1029 5867 3352 6422 65 38 1 chr20 19926049 19927016 -52226866 - Harlequin LTR ERV1 -4322 2574 1572 * 6017 86 12 24 chr20 19927001 19927915 -52225967 - Harlequin LTR ERV1 -5993 903 1 * 3991 44 21 0 chr20 19927916 19928395 -52225487 - LTR2B LTR ERV1 -1 489 1 191 36 36 0 chr20 19929020 19929048 -52224834 + (TG)n Simple_repeat Simple_repeat 2 30 0 842 259 15 0 chr20 19931110 19931307 -52222575 + MIR SINE MIR 60 259 -3 582 174 8 0 chr20 19935250 19935382 -52218500 - LTR37A LTR ERV1 -11 415 283 324 0 0 0 chr20 19935382 19935418 -52218464 + (TG)n Simple_repeat Simple_repeat 2 37 0 1909 180 12 0 chr20 19935436 19935770 -52218112 + MER7A DNA MER2_type 11 346 0 1063 240 123 44 chr20 19936425 19936976 -52216906 - HsTC2 DNA Tc2 -15 1883 1289 269 275 28 46 chr20 19937334 19937443 -52216439 - L2 LINE L2 0 3313 3207 2505 68 0 3 chr20 19937471 19937798 -52216084 - AluY SINE Alu 0 326 1 2948 139 27 57 chr20 19937815 19938007 -52215875 - L1MA9 LINE L1 -365 5947 5751 249 33 0 0 chr20 19938007 19938037 -52215845 + (TG)n Simple_repeat Simple_repeat 2 31 0 2948 139 27 57 chr20 19938037 19938479 -52215403 - L1MA9 LINE L1 -561 5751 5332 976 216 0 4 chr20 19938475 19938702 -52215180 - L1 LINE L1 -2478 3668 3443 * 11600 201 37 15 chr20 19938681 19940706 -52213176 - L1MA9 LINE L1 -802 5344 3231 2436 88 0 0 chr20 19940706 19941012 -52212870 - AluY SINE Alu -5 306 1 11600 201 37 15 chr20 19941012 19941952 -52211930 - L1MA9 LINE L1 -2915 3231 2313 264 208 0 0 chr20 19942266 19942319 -52211563 + MER58 DNA MER1_type 2366 2418 -2 246 156 0 0 chr20 19944191 19944236 -52209646 + (TA)n Simple_repeat Simple_repeat 2 46 0 2024 201 19 61 chr20 19944435 19944958 -52208924 + MLT1D LTR MaLR 5 505 0 250 291 52 45 chr20 19945132 19945219 -52208663 - L2 LINE L2 -1 3271 3181 372 71 0 0 chr20 19945219 19945275 -52208607 + (CA)n Simple_repeat Simple_repeat 1 56 0 250 291 52 45 chr20 19945275 19945321 -52208561 - L2 LINE L2 -91 3181 3137 473 241 0 0 chr20 19945336 19945419 -52208463 + MER5A DNA MER1_type 6 88 -101 222 279 12 47 chr20 19945365 19945451 -52208431 - MER5A DNA MER1_type -23 166 84 * 180 0 0 0 chr20 19945497 19945517 -52208365 + (TG)n Simple_repeat Simple_repeat 1 20 0 732 222 5 74 chr20 19945700 19945826 -52208056 - MER5A DNA MER1_type 0 189 81 2312 82 0 0 chr20 19945826 19946117 -52207765 - AluSg SINE Alu -19 291 1 732 222 5 74 chr20 19946117 19946193 -52207689 - MER5A DNA MER1_type -108 81 1 2514 120 199 47 chr20 19946633 19947166 -52206716 - LTR18B LTR ERVL 0 614 1 23 0 0 0 chr20 19949750 19949773 -52204109 + AT_rich Low_complexity Low_complexity 1 23 0 530 383 99 26 chr20 19950063 19950528 -52203354 - L3 LINE CR1 -13 1564 1066 736 255 104 9 chr20 19950664 19950876 -52203006 + MIR SINE MIR 30 261 -1 2370 92 0 0 chr20 19951623 19951918 -52201964 + AluSq SINE Alu 1 295 -18 694 254 36 6 chr20 19954495 19954660 -52199222 + MER5B DNA MER1_type 3 172 -6 2311 97 0 0 chr20 19955048 19955336 -52198546 + AluSc SINE Alu 1 288 -21 445 299 90 0 chr20 19956354 19956488 -52197394 + MIR SINE MIR 40 185 -77 324 245 136 45 chr20 19957627 19957782 -52196100 - L1M4 LINE L1 -1447 4699 4531 349 218 40 57 chr20 19957956 19958080 -52195802 - L1M4 LINE L1 -763 5383 5262 338 317 78 39 chr20 19958104 19958284 -52195598 - MIR3 SINE MIR -19 189 3 924 297 87 39 chr20 19958599 19958692 -52195190 + L2 LINE L2 2256 2343 -971 1636 74 37 0 chr20 19958692 19958908 -52194974 - AluSq SINE Alu -13 300 77 924 297 87 39 chr20 19958908 19959249 -52194633 + L2 LINE L2 2343 2711 -603 291 337 1 22 chr20 19959323 19959426 -52194456 + L2 LINE L2 2881 2982 -331 390 300 17 0 chr20 19959426 19959546 -52194336 + L2 LINE L2 3190 3311 -2 210 376 62 25 chr20 19959697 19959859 -52194023 + L2 LINE L2 2832 2999 -314 259 306 35 0 chr20 19959891 19959976 -52193906 + L2 LINE L2 3185 3272 0 245 370 55 28 chr20 19960012 19960193 -52193689 + L2 LINE L2 3086 3271 -1 232 254 0 0 chr20 19961696 19961755 -52192127 - MLT1J2 LTR MaLR -115 335 277 750 263 23 0 chr20 19961792 19961967 -52191915 + MER5A DNA MER1_type 11 189 0 334 324 29 12 chr20 19961978 19962151 -52191731 - MLT1J1 LTR MaLR -232 214 39 417 284 142 83 chr20 19962301 19962724 -52191158 + L2 LINE L2 2813 3260 -12 277 279 27 18 chr20 19963592 19963703 -52190179 - MIR SINE MIR -150 112 1 459 269 126 67 chr20 19963750 19963988 -52189894 - MIR SINE MIR 0 262 11 213 94 0 0 chr20 19964062 19964094 -52189788 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2465 72 0 3 chr20 19964192 19964499 -52189383 - AluY SINE Alu -5 306 1 525 333 16 16 chr20 19964635 19964818 -52189064 - MER5A DNA MER1_type 0 189 7 2464 74 3 0 chr20 19965344 19965643 -52188239 + AluY SINE Alu 3 302 -9 694 313 30 21 chr20 19965650 19965979 -52187903 - LTR16C LTR ERVL 0 491 160 314 325 68 26 chr20 19966266 19966457 -52187425 + L1MEd LINE L1 449 647 -5472 366 42 0 0 chr20 19966646 19966694 -52187188 + (CA)n Simple_repeat Simple_repeat 1 48 0 207 0 0 0 chr20 19967089 19967112 -52186770 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2134 97 0 24 chr20 19968012 19968341 -52185541 + AluSq SINE Alu 1 322 0 259 271 158 15 chr20 19968718 19968851 -52185031 + MIR3 SINE MIR 8 159 -49 199 262 71 151 chr20 19970276 19970528 -52183354 + L2 LINE L2 2999 3230 -42 1448 196 39 28 chr20 19971073 19971431 -52182451 - MLT1A2 LTR MaLR -8 366 5 394 318 153 19 chr20 19972904 19973165 -52180717 + HAL1b LINE L1 98 393 -955 530 311 40 37 chr20 19973459 19973787 -52180095 + L1MC/D LINE L1 5474 5802 -2006 1205 167 48 12 chr20 19974313 19974564 -52179318 + L1PA16 LINE L1 5904 6163 -3 241 172 31 16 chr20 19974657 19974721 -52179161 + GA-rich Low_complexity Low_complexity 3 67 0 493 221 3 45 chr20 19974749 19975041 -52178841 + GA-rich Low_complexity Low_complexity 1 279 0 325 289 67 32 chr20 19975749 19975904 -52177978 - MIR SINE MIR -57 151 37 206 225 0 0 chr20 19976011 19976051 -52177831 + GA-rich Low_complexity Low_complexity 1 40 0 2174 149 3 6 chr20 19976814 19977176 -52176706 - L1PB1 LINE L1 -3 6148 5788 488 103 29 40 chr20 19977178 19977353 -52176529 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 806 131 0 0 chr20 19977353 19977483 -52176399 - L1PB1 LINE L1 -348 5803 5674 439 107 0 6 chr20 19977483 19977559 -52176323 + L1PB1 LINE L1 5601 5673 -486 275 267 83 8 chr20 19978059 19978179 -52175703 - MLT1I LTR MaLR -268 141 13 223 314 9 19 chr20 19978931 19979036 -52174846 + (CA)n Simple_repeat Simple_repeat 1 104 0 32 0 0 0 chr20 19979680 19979712 -52174170 + AT_rich Low_complexity Low_complexity 1 32 0 348 206 75 47 chr20 19979844 19979951 -52173931 - L1M LINE L1 -801 5363 5254 287 303 41 41 chr20 19980194 19980508 -52173374 - L1MEc LINE L1 -4811 1499 1186 306 318 5 79 chr20 19980516 19980730 -52173152 - L1MEc LINE L1 -5036 1083 886 500 247 24 27 chr20 19981416 19981718 -52172164 - L1MC/D LINE L1 -756 5390 5139 377 261 0 8 chr20 19984599 19984718 -52169164 - MER103 DNA DNA -44 122 5 1787 212 14 12 chr20 19985151 19985610 -52168272 - MER89 LTR ERV1 0 559 1 1980 179 71 3 chr20 19986145 19986526 -52167356 - MSTB LTR MaLR 0 426 20 2435 212 26 20 chr20 19987488 19988025 -52165857 - MER87 LTR ERV1 0 541 2 2038 129 0 3 chr20 19988824 19989110 -52164772 - AluSx SINE Alu -7 305 21 251 290 0 0 chr20 19989142 19989204 -52164678 - MIR SINE MIR -76 132 71 302 283 66 46 chr20 19989421 19989573 -52164309 + L1ME LINE L1 5656 5810 -311 267 247 82 62 chr20 19989631 19989777 -52164105 + MLT1G1 LTR MaLR 162 310 -285 239 246 66 0 chr20 19990341 19990402 -52163480 + L1MEd LINE L1 704 768 -5351 2317 223 66 16 chr20 19990757 19991456 -52162426 + L1ME2 LINE L1 5430 6163 -1 189 107 0 0 chr20 19992190 19992218 -52161664 + (A)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr20 19995426 19995449 -52158433 + AT_rich Low_complexity Low_complexity 1 23 0 2234 84 42 35 chr20 19996157 19996467 -52157415 + AluSx SINE Alu 1 312 0 187 261 39 92 chr20 19996722 19996852 -52157030 + MIR SINE MIR 116 238 -24 793 294 118 0 chr20 19997252 19997565 -52156317 + MLT1I LTR MaLR 60 409 0 510 362 91 6 chr20 19997612 19997930 -52155952 + L2 LINE L2 2827 3171 -142 210 37 0 0 chr20 19998013 19998040 -52155842 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2021 125 0 0 chr20 19998246 19998664 -52155218 - AluSg SINE Alu 0 418 1 359 282 95 81 chr20 19998671 19998822 -52155060 + L1M4 LINE L1 2786 2933 -3213 1630 175 32 51 chr20 19998822 19999194 -52154688 + MLT1A1 LTR MaLR 1 365 0 359 282 95 81 chr20 19999194 19999485 -52154397 + L1M4 LINE L1 2933 3234 -2912 215 222 0 0 chr20 19999712 19999766 -52154116 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 309 215 112 9 chr20 19999835 19999942 -52153940 - L1ME4a LINE L1 -182 5939 5822 373 362 154 13 chr20 19999972 20000420 -52153462 - L1ME4a LINE L1 -346 5775 5265 284 256 23 70 chr20 20000673 20000802 -52153080 + MLT1K LTR MaLR 117 239 -349 259 229 71 0 chr20 20000850 20000920 -52152962 + MLT1K LTR MaLR 496 570 -18 832 271 91 64 chr20 20000920 20001478 -52152404 + L2 LINE L2 2748 3312 -1 321 311 132 6 chr20 20001997 20002210 -52151672 - MLT1J2 LTR MaLR -167 279 15 2271 114 10 3 chr20 20002778 20003084 -52150798 + AluSx SINE Alu 1 308 -4 751 244 54 5 chr20 20004080 20004285 -52149597 - MIR SINE MIR -41 221 7 708 208 27 16 chr20 20004287 20004470 -52149412 - MER5A DNA MER1_type -4 185 1 335 315 212 5 chr20 20004682 20004885 -52148997 + MIR SINE MIR 18 262 0 467 266 18 0 chr20 20005286 20005395 -52148487 - L2 LINE L2 -1 3312 3202 239 254 313 29 chr20 20005443 20005695 -52148187 - L2 LINE L2 -291 3022 2709 258 209 0 0 chr20 20005967 20006010 -52147872 + MER5B DNA MER1_type 6 48 -130 999 239 94 8 chr20 20006025 20006377 -52147505 + L1MD3 LINE L1 7603 7984 -11 438 295 41 0 chr20 20006380 20006502 -52147380 + MER5B DNA MER1_type 50 176 -2 568 273 16 2 chr20 20007412 20007559 -52146323 + MER5B DNA MER1_type 26 161 -17 582 189 116 30 chr20 20007575 20007739 -52146143 - MER58A DNA MER1_type 0 224 47 413 240 0 21 chr20 20007770 20007866 -52146016 + MER5A DNA MER1_type 11 104 -85 998 263 178 35 chr20 20009336 20009846 -52144036 + MLT1G1 LTR MaLR 1 583 -12 187 274 0 84 chr20 20009913 20010008 -52143874 + L2 LINE L2 2224 2310 -1004 205 382 96 19 chr20 20010486 20010643 -52143239 + L2 LINE L2 2896 3064 -208 213 273 0 23 chr20 20010735 20010779 -52143103 + MER5A DNA MER1_type 17 59 -130 946 221 0 0 chr20 20010851 20011023 -52142859 + MER5A DNA MER1_type 17 188 -1 594 196 152 0 chr20 20011035 20011173 -52142709 + MER5B DNA MER1_type 16 174 -4 587 230 149 31 chr20 20011191 20011352 -52142530 + MER5A DNA MER1_type 7 186 -3 321 197 15 0 chr20 20011354 20011420 -52142462 + L2 LINE L2 3187 3253 -19 379 300 142 0 chr20 20011559 20011679 -52142203 - L2 LINE L2 -2 3270 3134 608 270 130 32 chr20 20011905 20012190 -52141692 - LTR16C LTR ERVL -12 479 167 5006 182 38 6 chr20 20012261 20013909 -52139973 - L1PA16 LINE L1 -9 6157 4387 390 42 0 0 chr20 20013909 20013957 -52139925 + (TATG)n Simple_repeat Simple_repeat 2 49 0 5006 182 38 6 chr20 20013957 20014231 -52139651 - L1PA16 LINE L1 -1779 4387 4123 937 178 16 37 chr20 20014234 20014425 -52139457 + MER5A DNA MER1_type 2 188 -1 362 278 53 38 chr20 20014619 20014752 -52139130 - L2 LINE L2 -1 3312 3178 182 236 36 18 chr20 20014793 20014848 -52139034 - MER5A DNA MER1_type -4 185 130 244 242 113 0 chr20 20014899 20014961 -52138921 - L2 LINE L2 -225 3047 2979 353 113 16 16 chr20 20015113 20015175 -52138707 + MLT1A1 LTR MaLR 1 62 -303 * 377 143 0 0 chr20 20015174 20015237 -52138645 + MLT1A1 LTR MaLR 301 363 -2 752 150 7 46 chr20 20015429 20015582 -52138300 + MER3 DNA MER1_type 60 206 -3 277 200 0 0 chr20 20015542 20015592 -52138290 - MER3 DNA MER1_type -119 90 41 * 422 334 190 16 chr20 20015592 20015966 -52137916 - L2 LINE L2 -641 2673 2235 225 357 85 16 chr20 20016216 20016345 -52137537 - L2 LINE L2 -10 3262 3125 412 238 83 48 chr20 20016777 20016945 -52136937 + L2 LINE L2 2734 2907 -407 192 333 227 13 chr20 20017033 20017183 -52136699 + L2 LINE L2 3106 3287 -26 563 294 38 34 chr20 20017259 20017494 -52136388 - MLT1L LTR MaLR -361 254 19 770 174 7 7 chr20 20017586 20017735 -52136147 - MER65B LTR ERV1 -381 150 2 5090 228 51 9 chr20 20017739 20018117 -52135765 - MER65B-int LTR ERV1 -5 4866 4505 2579 51 0 6 chr20 20018117 20018430 -52135452 + AluY SINE Alu 1 311 0 5090 228 51 9 chr20 20018430 20019373 -52134509 - MER65B-int LTR ERV1 -366 4505 3531 261 253 101 0 chr20 20019379 20019458 -52134424 - MER65A-int LTR ERV1 -847 4089 4003 927 239 130 8 chr20 20019467 20019868 -52134014 - MER65A-int LTR ERV1 -1141 3795 3346 299 108 31 46 chr20 20019912 20019977 -52133905 + FAM SINE Alu 116 179 0 1003 193 52 77 chr20 20019977 20020563 -52133319 - MER65A-int LTR ERV1 -1974 4022 2471 560 188 68 42 chr20 20020645 20020837 -52133045 - MER65A-int LTR ERV1 -2869 3729 3533 406 240 47 12 chr20 20020929 20021100 -52132782 - MER65A-int LTR ERV1 -6224 1896 1720 23 0 0 0 chr20 20021107 20021130 -52132752 + AT_rich Low_complexity Low_complexity 1 23 0 2016 108 0 14 chr20 20021130 20021446 -52132436 - AluSq SINE Alu 0 321 10 3034 186 59 109 chr20 20021452 20022723 -52131159 - MER65A-int LTR ERV1 -2450 2421 704 629 247 0 11 chr20 20022903 20023077 -52130805 + L1 LINE L1 2146 2317 -3829 1348 223 24 56 chr20 20023077 20023486 -52130396 - MER65A-int LTR ERV1 -4040 831 436 13734 207 34 13 chr20 20023509 20029328 -52124554 + L1MA5A LINE L1 11 6045 -743 4231 139 40 13 chr20 20029346 20030103 -52123779 + L1MA5A LINE L1 6159 6935 -4 786 199 22 98 chr20 20030111 20030428 -52123454 - MER65A-int LTR ERV1 -4509 362 70 2301 169 25 11 chr20 20030498 20030937 -52122945 - MER65A LTR ERV1 0 445 1 5734 184 32 28 chr20 20031267 20031398 -52122484 + L1MB7 LINE L1 3840 3969 -2215 2280 57 4 0 chr20 20031398 20031678 -52122204 - AluY SINE Alu -18 293 13 5734 184 32 28 chr20 20031678 20031976 -52121906 + L1MB7 LINE L1 3969 4264 -1920 2087 105 18 0 chr20 20031976 20032253 -52121629 + AluY SINE Alu 16 297 -14 5734 184 32 28 chr20 20032253 20034157 -52119725 + L1MB7 LINE L1 4264 6184 0 182 264 19 38 chr20 20035250 20035303 -52118579 - L2 LINE L2 -11 3302 3251 43 20 0 0 chr20 20036139 20036189 -52117693 + AT_rich Low_complexity Low_complexity 1 50 0 1187 164 139 2 chr20 20036266 20036904 -52116978 - L1MC1 LINE L1 -109 6224 5504 375 265 155 55 chr20 20037762 20038162 -52115720 + L2 LINE L2 2873 3312 -1 203 278 100 22 chr20 20038693 20038783 -52115099 - L2 LINE L2 -8 3305 3209 407 275 150 0 chr20 20038955 20039115 -52114767 - MIR SINE MIR 0 262 79 1962 147 42 6 chr20 20039355 20039689 -52114193 - MER7A DNA MER2_type -1 345 2 351 346 107 0 chr20 20039704 20039863 -52114019 + MIR SINE MIR 13 188 -74 788 167 0 0 chr20 20039867 20039987 -52113895 + FLAM_A SINE Alu 1 120 -13 231 360 9 18 chr20 20040043 20040154 -52113728 + L2 LINE L2 3141 3250 -22 231 277 27 47 chr20 20040360 20040508 -52113374 - L1MC4 LINE L1 -31 8011 7867 515 199 224 25 chr20 20040584 20040785 -52113097 - L1ME2 LINE L1 -19 6145 5905 1632 164 57 16 chr20 20041059 20041425 -52112457 + Charlie1b DNA MER1_type 3 383 -140 387 200 30 0 chr20 20041858 20041958 -52111924 + Charlie1b DNA MER1_type 411 513 -10 276 273 91 20 chr20 20042927 20043026 -52110856 + L3b LINE CR1 1296 1401 -182 230 114 0 23 chr20 20043391 20043435 -52110447 + (TCTCCC)n Simple_repeat Simple_repeat 1 43 0 1884 129 3 44 chr20 20043832 20044151 -52109731 + AluSx SINE Alu 1 307 0 180 0 0 0 chr20 20044552 20044572 -52109310 + (TTTTTG)n Simple_repeat Simple_repeat 1 20 0 865 204 17 23 chr20 20044607 20044783 -52109099 - MER5B DNA MER1_type -3 175 1 514 223 97 17 chr20 20044791 20044966 -52108916 - MER5A DNA MER1_type 0 189 1 330 26 0 0 chr20 20045380 20045419 -52108463 + (TG)n Simple_repeat Simple_repeat 2 40 0 653 215 32 91 chr20 20046357 20046543 -52107339 - MER5A DNA MER1_type -13 176 2 396 316 96 15 chr20 20046568 20046704 -52107178 + MER5B DNA MER1_type 32 178 0 989 144 31 62 chr20 20046753 20046947 -52106935 + MER5A DNA MER1_type 1 188 -1 625 269 158 31 chr20 20047673 20048090 -52105792 + MLT1H LTR MaLR 80 549 0 202 191 24 0 chr20 20048187 20048229 -52105653 + L2 LINE L2 3023 3065 -248 217 260 268 24 chr20 20048985 20049108 -52104774 - MIR SINE MIR -108 154 2 535 255 161 6 chr20 20050443 20050604 -52103278 - MER5A DNA MER1_type 0 189 4 2253 112 3 0 chr20 20050715 20051011 -52102871 + AluSg SINE Alu 1 297 -13 1835 203 126 46 chr20 20052525 20053027 -52100855 - MLT1F LTR MaLR 0 542 1 208 311 81 0 chr20 20054352 20054426 -52099456 + L2 LINE L2 2560 2639 -675 796 201 82 5 chr20 20054431 20054625 -52099257 + MER3 DNA MER1_type 1 209 0 2664 161 41 74 chr20 20055394 20056027 -52097855 - LTR9 LTR ERV1 0 612 1 257 294 34 14 chr20 20056648 20056794 -52097088 - L1ME LINE L1 -369 5752 5604 374 262 171 78 chr20 20057123 20057444 -52096438 + MLT1H LTR MaLR 199 549 0 284 310 27 0 chr20 20058303 20058402 -52095480 + MIR SINE MIR 33 137 -71 7316 154 17 5 chr20 20058818 20060195 -52093687 - L1PA13 LINE L1 -1743 4403 3011 6278 92 11 3 chr20 20060196 20061954 -52091928 + L1PA13 LINE L1 4379 6160 -3 1893 214 33 13 chr20 20062159 20062613 -52091269 - MLT1D LTR MaLR -8 497 35 * 2439 173 15 11 chr20 20062612 20063068 -52090814 + LTR32 LTR ERVL 14 471 0 261 125 0 0 chr20 20063068 20063107 -52090775 - MLT1D LTR MaLR -466 39 1 188 323 84 36 chr20 20063109 20063276 -52090606 + L2 LINE L2 2933 3107 -165 311 317 66 49 chr20 20064210 20064453 -52089429 + L3 LINE CR1 1298 1544 -33 835 133 6 6 chr20 20065279 20065445 -52088437 + (GA)n Simple_repeat Simple_repeat 2 167 0 578 232 132 26 chr20 20065851 20066041 -52087841 + MER63A DNA MER1_type 1 210 0 185 0 40 0 chr20 20067608 20067633 -52086249 + (CAAAG)n Simple_repeat Simple_repeat 1 26 0 1261 212 102 0 chr20 20068066 20068330 -52085552 + AluJo SINE Alu 1 291 -21 321 267 12 12 chr20 20068448 20068534 -52085348 - MIR SINE MIR -128 134 49 181 189 0 54 chr20 20068678 20068715 -52085167 - L2 LINE L2 -20 3252 3218 2213 118 7 7 chr20 20069037 20069342 -52084540 + AluSx SINE Alu 1 305 -7 205 304 0 0 chr20 20069422 20069468 -52084414 + L3b LINE CR1 1295 1340 -243 349 271 201 8 chr20 20069695 20069848 -52084034 + MIR SINE MIR 42 213 -49 1055 211 113 52 chr20 20070716 20071104 -52082778 - MLT1H LTR MaLR -8 541 130 512 336 78 17 chr20 20071302 20071534 -52082348 - MIR SINE MIR -13 249 4 207 0 0 0 chr20 20071866 20071889 -52081993 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 344 263 90 53 chr20 20072409 20072542 -52081340 - MIR3 SINE MIR -56 152 15 431 187 179 45 chr20 20073105 20073239 -52080643 + L2 LINE L2 2376 2527 -787 28 0 0 0 chr20 20073386 20073414 -52080468 + AT_rich Low_complexity Low_complexity 1 28 0 1005 228 0 82 chr20 20073848 20074190 -52079692 + L1ME3 LINE L1 5740 6053 -109 971 222 5 10 chr20 20074212 20074415 -52079467 + MER58A DNA MER1_type 23 224 0 306 239 0 0 chr20 20074415 20074486 -52079396 + L1ME3 LINE L1 6045 6115 -47 669 63 36 18 chr20 20074506 20074617 -52079265 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 561 286 106 11 chr20 20074834 20075023 -52078859 + MIR SINE MIR 48 254 -8 525 253 112 35 chr20 20076125 20076295 -52077587 - MLT1E LTR MaLR -205 388 206 3315 103 0 5 chr20 20076313 20076832 -52077050 - MER41A LTR ERV1 0 554 1 28 48 0 0 chr20 20076860 20076902 -52076980 + AT_rich Low_complexity Low_complexity 1 42 0 744 255 43 0 chr20 20076902 20077090 -52076792 - MLT1E LTR MaLR -397 196 1 335 310 70 23 chr20 20077299 20077428 -52076454 - MIR3 SINE MIR -62 146 12 4167 237 52 19 chr20 20077451 20078651 -52075231 + L1MB7 LINE L1 2 1241 -5301 1227 125 0 11 chr20 20078729 20078905 -52074977 + AluSg/x SINE Alu 130 303 -7 4740 241 88 20 chr20 20078908 20080439 -52073443 + L1MB7 LINE L1 1291 2716 -3928 1848 162 0 40 chr20 20080439 20080736 -52073146 + AluSx SINE Alu 1 285 -27 4740 241 88 20 chr20 20080736 20082025 -52071857 + L1MB7 LINE L1 2716 4325 -2319 2148 190 47 22 chr20 20082016 20083757 -52070125 + L1MB7 LINE L1 4784 6668 -14 * 1542 252 82 19 chr20 20084035 20084623 -52069259 + L1ME2 LINE L1 5530 6154 -10 196 265 82 0 chr20 20084649 20084698 -52069184 + MER5B DNA MER1_type 125 177 -1 24 0 0 0 chr20 20084856 20084880 -52069002 + AT_rich Low_complexity Low_complexity 1 24 0 194 298 11 32 chr20 20085623 20085717 -52068165 + MIR SINE MIR 170 261 -1 568 237 129 25 chr20 20085798 20086247 -52067635 + MLT1F LTR MaLR 1 540 -2 360 245 90 58 chr20 20086710 20086898 -52066984 - MIR SINE MIR 0 262 69 305 125 62 0 chr20 20087354 20087402 -52066480 + MER5B DNA MER1_type 1 51 -127 264 227 107 13 chr20 20088177 20088252 -52065630 + L2 LINE L2 3227 3308 -5 402 271 20 112 chr20 20089084 20089335 -52064547 - MIR SINE MIR -14 248 21 979 265 63 57 chr20 20089915 20090391 -52063491 + MLT1H LTR MaLR 71 549 0 4209 183 34 1 chr20 20090433 20091226 -52062656 + L1MC1 LINE L1 20 838 -5588 555 86 76 5 chr20 20091229 20091427 -52062455 + (TA)n Simple_repeat Simple_repeat 1 212 0 3606 161 55 19 chr20 20091428 20092388 -52061494 + L1MC1 LINE L1 846 1944 -4482 1241 114 6 0 chr20 20092394 20092561 -52061321 - AluSp SINE Alu -26 287 120 3916 226 42 10 chr20 20092565 20092669 -52061213 + L1MC1 LINE L1 2009 2108 -4318 1656 161 21 7 chr20 20092669 20092948 -52060934 - AluJb SINE Alu -9 303 21 3916 226 42 10 chr20 20092948 20094509 -52059373 + L1MC1 LINE L1 2108 3727 -2699 726 168 0 0 chr20 20094513 20094626 -52059256 + FLAM_C SINE Alu 1 113 -30 1661 193 23 7 chr20 20094650 20094951 -52058931 + AluJo SINE Alu 1 306 -6 761 167 23 6 chr20 20094957 20095131 -52058751 + GA-rich Low_complexity Low_complexity 3 179 0 235 221 13 13 chr20 20095153 20095230 -52058652 + GA-rich Low_complexity Low_complexity 3 79 0 6001 230 25 21 chr20 20095230 20097015 -52056867 + L1MC1 LINE L1 3721 5512 -914 4987 124 32 61 chr20 20097016 20097987 -52055895 + L1MC1 LINE L1 5671 6613 0 257 337 111 68 chr20 20098373 20098421 -52055461 - L2 LINE L2 0 3313 3269 2273 74 0 7 chr20 20098421 20098704 -52055178 - AluSq SINE Alu -13 300 20 257 337 111 68 chr20 20098704 20099023 -52054859 - L2 LINE L2 -44 3269 2930 383 315 14 91 chr20 20099156 20099432 -52054450 + MER115 DNA AcHobo 56 310 -383 870 206 46 0 chr20 20099499 20099693 -52054189 + MER115 DNA AcHobo 477 679 -14 326 256 0 4 chr20 20099746 20099876 -52054006 - MER5A DNA MER1_type -1 188 9 22 0 0 0 chr20 20100169 20100191 -52053691 + AT_rich Low_complexity Low_complexity 1 22 0 259 221 234 32 chr20 20101479 20101633 -52052249 - Charlie8 DNA MER1_type -2154 263 79 3057 72 26 2 chr20 20101779 20102198 -52051684 - L1PA10 LINE L1 -1 6167 5739 738 89 45 0 chr20 20102198 20102310 -52051572 + L1P4 LINE L1 5551 5667 -501 248 260 26 26 chr20 20103580 20103657 -52050225 + MIR SINE MIR 39 115 -147 356 273 101 14 chr20 20104908 20105047 -52048835 + MIR3 SINE MIR 33 183 -25 2127 139 0 0 chr20 20105484 20105778 -52048104 - AluSx SINE Alu -18 294 1 21 0 0 0 chr20 20105786 20105807 -52048075 + AT_rich Low_complexity Low_complexity 1 21 0 1171 223 148 47 chr20 20105903 20106436 -52047446 + MLT1G LTR MaLR 2 588 -2 2008 165 15 21 chr20 20106492 20106831 -52047051 - MER1B DNA MER1_type 0 337 1 291 335 168 19 chr20 20107130 20107339 -52046543 + MIR SINE MIR 2 241 -21 2265 161 78 22 chr20 20107541 20108000 -52045882 - MER31A LTR ERV1 0 485 1 184 333 38 76 chr20 20108129 20108234 -52045648 - L2 LINE L2 -4 3309 3209 617 260 18 26 chr20 20108354 20108548 -52045334 - MIR SINE MIR -41 221 25 347 280 112 21 chr20 20108770 20108913 -52044969 + MLT1J2 LTR MaLR 273 428 -22 215 344 62 0 chr20 20109383 20109479 -52044403 - L2 LINE L2 0 3272 3171 304 219 26 53 chr20 20111142 20111256 -52042626 - MER33 DNA MER1_type 0 363 253 294 211 155 56 chr20 20111236 20111378 -52042504 - MER33 DNA MER1_type -164 160 5 * 1622 243 105 89 chr20 20111382 20112013 -52041869 + MER115 DNA AcHobo 53 693 0 317 235 39 5 chr20 20112570 20112706 -52041176 - MLT1G LTR MaLR 0 595 401 244 235 0 0 chr20 20112921 20112972 -52040910 - MLT1I LTR MaLR -274 135 85 * 291 241 24 12 chr20 20112947 20113030 -52040852 - MLT1F LTR MaLR -439 103 20 332 350 26 0 chr20 20113303 20113420 -52040462 + L2 LINE L2 3139 3258 -14 689 140 0 27 chr20 20113422 20113572 -52040310 + (GGGA)n Simple_repeat Simple_repeat 3 148 0 615 303 96 0 chr20 20113662 20113880 -52040002 - MIR SINE MIR -11 251 13 1064 274 51 17 chr20 20114548 20114899 -52038983 + L1ME3A LINE L1 5534 5896 -274 290 250 83 0 chr20 20115434 20115518 -52038364 - LTR16C LTR ERVL -14 477 387 279 0 0 0 chr20 20116392 20116423 -52037459 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 580 107 0 0 chr20 20116427 20116511 -52037371 - AluSg/x SINE Alu -31 278 195 766 235 162 67 chr20 20118352 20118888 -52034994 + MLT1G1 LTR MaLR 1 587 -8 2592 138 18 43 chr20 20118982 20119424 -52034458 + Tigger2a DNA MER2_type 1 431 -3 1014 234 87 91 chr20 20120013 20120552 -52033330 - MLT1H LTR MaLR 0 549 13 458 317 67 0 chr20 20121321 20121501 -52032381 + MIR SINE MIR 61 252 -10 1007 240 58 77 chr20 20121854 20122280 -52031602 - MLT1G LTR MaLR -161 434 36 252 191 132 0 chr20 20122280 20122348 -52031534 - MLT1G LTR MaLR -518 77 1 29 47 0 0 chr20 20122367 20122410 -52031472 + AT_rich Low_complexity Low_complexity 1 43 0 1571 183 23 103 chr20 20122426 20122824 -52031058 - MLT1A2 LTR MaLR -4 370 5 2536 205 74 132 chr20 20122828 20123706 -52030176 - MLT1A2-int LTR MaLR 0 1735 544 1277 187 47 4 chr20 20123699 20123956 -52029926 - MLT1A2-int LTR MaLR -1103 268 1 * 1311 205 31 83 chr20 20123962 20124179 -52029703 - MLT1A2 LTR MaLR -6 368 178 204 40 0 0 chr20 20124179 20124204 -52029678 + (GA)n Simple_repeat Simple_repeat 2 26 0 1311 205 31 83 chr20 20124204 20124371 -52029511 - MLT1A2 LTR MaLR -196 178 4 254 270 112 53 chr20 20124840 20124992 -52028890 - MLT1K LTR MaLR -289 299 139 1828 177 33 22 chr20 20125684 20126045 -52027837 + MLT1A1 LTR MaLR 1 365 0 851 250 103 56 chr20 20126326 20126886 -52026996 + MLT1G1 LTR MaLR 1 626 0 203 280 20 0 chr20 20128218 20128268 -52025614 + L2 LINE L2 3221 3271 -1 227 336 28 19 chr20 20128293 20128400 -52025482 - L2 LINE L2 -214 3058 2951 386 278 48 32 chr20 20129595 20129721 -52024161 - L2 LINE L2 0 3272 3145 376 262 11 59 chr20 20129931 20130118 -52023764 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 265 276 0 78 chr20 20130137 20130329 -52023553 + (CAGTA)n Simple_repeat Simple_repeat 3 179 0 * 474 216 40 34 chr20 20130218 20130394 -52023488 + (CAGTG)n Simple_repeat Simple_repeat 1 177 0 190 111 0 44 chr20 20130413 20130458 -52023424 + (CAGTG)n Simple_repeat Simple_repeat 1 43 0 343 185 0 58 chr20 20130492 20130681 -52023201 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 206 244 30 38 chr20 20130699 20130830 -52023052 + (CTGTG)n Simple_repeat Simple_repeat 5 134 0 * 374 176 55 55 chr20 20130746 20130911 -52022971 + (TAGTG)n Simple_repeat Simple_repeat 4 168 0 * 460 248 17 48 chr20 20130799 20131200 -52022682 + (CAGTG)n Simple_repeat Simple_repeat 1 388 0 1084 224 19 0 chr20 20132428 20132642 -52021240 - MER58A DNA MER1_type 0 224 7 189 147 0 0 chr20 20132776 20132810 -52021072 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 248 236 78 11 chr20 20132816 20132918 -52020964 + L1MC4 LINE L1 6572 6652 -1133 255 31 0 0 chr20 20133466 20133498 -52020384 + (TG)n Simple_repeat Simple_repeat 2 33 0 858 227 132 73 chr20 20133884 20134276 -52019606 + L1MEd LINE L1 520 953 -5166 1936 172 29 20 chr20 20134276 20134619 -52019263 - MER7A DNA MER2_type -1 345 2 858 227 132 73 chr20 20134619 20134758 -52019124 + L1MEd LINE L1 953 1082 -5037 353 138 28 119 chr20 20134813 20134922 -52018960 - Charlie8 DNA MER1_type -2245 172 74 221 163 0 0 chr20 20135887 20135930 -52017952 + T-rich Low_complexity Low_complexity 1 43 0 2528 55 0 13 chr20 20136129 20136436 -52017446 + AluY SINE Alu 1 303 -8 526 198 28 0 chr20 20136961 20137067 -52016815 - MER5A DNA MER1_type -77 112 4 406 274 27 14 chr20 20137079 20137225 -52016657 - MER5B DNA MER1_type 0 178 31 1709 143 50 18 chr20 20137230 20137510 -52016372 + AluJo SINE Alu 10 298 -14 976 232 65 77 chr20 20138648 20139049 -52014833 - MSTD LTR MaLR 0 396 1 776 99 18 0 chr20 20140511 20140622 -52013260 - FLAM_C SINE Alu -18 125 13 21 36 0 0 chr20 20141119 20141147 -52012735 + AT_rich Low_complexity Low_complexity 1 28 0 1891 225 139 15 chr20 20141325 20141863 -52012019 - MLT1E2 LTR MaLR -2 624 20 21 36 0 0 chr20 20141976 20142004 -52011878 + AT_rich Low_complexity Low_complexity 1 28 0 236 302 0 35 chr20 20142455 20142541 -52011341 + (TATATG)n Simple_repeat Simple_repeat 6 88 0 29 0 0 0 chr20 20142603 20142632 -52011250 + AT_rich Low_complexity Low_complexity 1 29 0 3950 99 42 54 chr20 20142814 20142970 -52010912 + LTR9B LTR ERV1 9 165 -479 2259 64 3 80 chr20 20142970 20143297 -52010585 - AluY SINE Alu -9 302 1 3950 99 42 54 chr20 20143297 20143784 -52010098 + LTR9B LTR ERV1 165 644 0 294 268 102 64 chr20 20144179 20144336 -52009546 - MIR3 SINE MIR -44 164 2 436 176 11 0 chr20 20144401 20144492 -52009390 + L1MA9 LINE L1 6189 6280 -32 554 280 102 51 chr20 20144550 20144864 -52009018 + HAL1 LINE L1 116 445 -2062 1367 169 97 133 chr20 20145124 20145598 -52008284 + MLT1E3 LTR MaLR 189 615 -9 994 146 10 44 chr20 20145751 20145893 -52007989 - L1MA4A LINE L1 -3 6300 6155 267 31 0 0 chr20 20145893 20145925 -52007957 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1846 144 44 0 chr20 20145925 20146195 -52007687 - AluJb SINE Alu -29 283 2 994 146 10 44 chr20 20146195 20146256 -52007626 - L1MA4A LINE L1 -146 6157 6103 251 286 60 12 chr20 20147148 20147232 -52006650 - MIR3 SINE MIR -11 197 110 356 314 39 13 chr20 20147329 20147485 -52006397 + MIR SINE MIR 73 232 -30 2069 105 6 54 chr20 20148188 20148501 -52005381 - AluSx SINE Alu -14 298 1 414 0 0 0 chr20 20148640 20148686 -52005196 + (CA)n Simple_repeat Simple_repeat 1 46 0 1318 268 67 29 chr20 20148815 20149266 -52004616 - LTR16C LTR ERVL -18 473 6 2326 105 3 0 chr20 20150080 20150385 -52003497 + AluSx SINE Alu 1 306 -6 723 304 174 33 chr20 20151369 20151885 -52001997 - MLT1G1 LTR MaLR -2 593 5 1064 302 110 6 chr20 20152508 20153173 -52000709 + L2 LINE L2 2571 3311 -2 681 296 31 14 chr20 20153273 20153652 -52000230 + LTR16A LTR ERVL 18 444 -6 1211 182 18 36 chr20 20154310 20154585 -51999297 + L1MA9 LINE L1 6021 6290 -22 1884 156 3 19 chr20 20154631 20154946 -51998936 + AluJb SINE Alu 1 310 -2 318 254 85 25 chr20 20154948 20155066 -51998816 + L1ME LINE L1 5698 5822 -299 1582 152 22 7 chr20 20155091 20155360 -51998522 + AluSx SINE Alu 37 309 -3 1920 142 0 30 chr20 20156276 20156578 -51997304 - AluSx SINE Alu -19 293 1 315 209 27 0 chr20 20157545 20157655 -51996227 + GA-rich Low_complexity Low_complexity 2 114 0 346 281 36 71 chr20 20157664 20157773 -51996109 + L1ME4a LINE L1 5734 5845 -276 2369 96 0 0 chr20 20157773 20158065 -51995817 + AluSg SINE Alu 1 292 -18 346 281 36 71 chr20 20158065 20158208 -51995674 + L1ME4a LINE L1 5845 5977 -144 226 226 19 0 chr20 20158371 20158424 -51995458 - MIR SINE MIR -104 158 105 297 75 0 0 chr20 20158661 20158701 -51995181 + (T)n Simple_repeat Simple_repeat 1 40 0 1135 194 26 9 chr20 20159761 20159988 -51993894 + Charlie1 DNA MER1_type 9 239 -2522 421 220 30 0 chr20 20159974 20160074 -51993808 + Charlie1 DNA MER1_type 2622 2724 -37 * 251 285 26 83 chr20 20160902 20161130 -51992752 - L2 LINE L2 -743 2571 2357 2919 140 15 33 chr20 20162220 20162610 -51991272 + MER41B LTR ERV1 108 346 -140 2226 104 0 0 chr20 20162610 20162908 -51990974 - AluSg SINE Alu -12 298 1 2919 140 15 33 chr20 20162908 20163035 -51990847 + MER41B LTR ERV1 346 474 -12 492 253 102 15 chr20 20163155 20163437 -51990445 - MLT1I LTR MaLR -6 403 67 256 266 111 6 chr20 20163643 20163746 -51990136 - MIR SINE MIR -63 145 40 528 293 159 31 chr20 20164559 20164849 -51989033 - L3 LINE CR1 -29 1548 1222 2134 84 0 3 chr20 20165349 20165673 -51988209 - AluY SINE Alu 0 323 1 2157 112 0 3 chr20 20166230 20166533 -51987349 + AluSc SINE Alu 1 302 -7 539 242 51 67 chr20 20168460 20168638 -51985244 - MER5B DNA MER1_type 0 178 4 6712 59 6 42 chr20 20168676 20169666 -51984216 - SVA Other Other 0 1386 433 2634 88 24 90 chr20 20169733 20170548 -51983334 - SVA Other Other -518 868 393 2436 41 0 0 chr20 20171271 20171563 -51982319 + AluY SINE Alu 1 292 -19 292 333 11 73 chr20 20172959 20173136 -51980746 - MIR SINE MIR -49 213 48 209 305 36 11 chr20 20173365 20173486 -51980396 + MIR SINE MIR 41 147 -61 3274 71 18 29 chr20 20173538 20173987 -51979895 - MLT2A1 LTR ERVL 0 444 1 270 0 0 0 chr20 20174247 20174277 -51979605 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 214 224 0 35 chr20 20174354 20174412 -51979470 + GA-rich Low_complexity Low_complexity 4 59 0 248 339 85 0 chr20 20174416 20174546 -51979336 - MIR SINE MIR -17 245 105 2350 97 0 0 chr20 20175901 20176211 -51977671 + AluSg SINE Alu 1 310 0 484 301 24 60 chr20 20176443 20176529 -51977353 - MIR SINE MIR -6 256 168 1623 170 11 11 chr20 20176529 20176831 -51977051 + AluSx SINE Alu 1 302 0 484 301 24 60 chr20 20176831 20177004 -51976878 - MIR SINE MIR -94 168 12 21 0 0 0 chr20 20177004 20177025 -51976857 + AT_rich Low_complexity Low_complexity 1 21 0 372 269 28 64 chr20 20177576 20177717 -51976165 + MIR SINE MIR 14 149 -113 674 298 90 51 chr20 20177717 20178113 -51975769 - LTR16A1 LTR ERVL 0 482 73 2301 127 94 8 chr20 20179794 20180188 -51973694 - MSTA LTR MaLR 0 428 1 1659 212 84 47 chr20 20180204 20180735 -51973147 - MLT1F1 LTR MaLR 0 567 17 264 272 202 29 chr20 20181414 20181587 -51972295 + MLT1H LTR MaLR 347 549 0 309 230 19 118 chr20 20181591 20181752 -51972130 + MLT1H-int LTR MaLR 5 149 -1222 268 300 173 47 chr20 20182646 20182923 -51970959 + MLT1H-int LTR MaLR 1028 1339 -32 517 295 35 37 chr20 20182953 20183224 -51970658 + MLT1H LTR MaLR 1 316 -233 372 251 144 41 chr20 20183394 20183589 -51970293 + MLT1H LTR MaLR 333 547 -8 213 248 152 88 chr20 20184391 20184516 -51969366 + L2 LINE L2 3136 3268 -4 * 1778 276 116 38 chr20 20184510 20185500 -51968382 - L2 LINE L2 0 3313 2235 512 321 0 0 chr20 20186033 20186164 -51967718 - MER94 DNA DNA -1 133 3 2263 104 3 0 chr20 20186615 20186923 -51966959 + AluSx SINE Alu 1 309 -3 418 298 86 7 chr20 20187193 20187344 -51966538 - MIR SINE MIR -53 209 47 579 149 41 8 chr20 20187499 20187620 -51966262 - MER96B DNA MER1_type? -8 409 285 253 95 0 0 chr20 20187620 20187662 -51966220 - L1MA9 LINE L1 -282 6030 5989 1539 148 14 11 chr20 20187663 20187947 -51965935 + L1MA9 LINE L1 6026 6310 -2 256 182 182 0 chr20 20187961 20188016 -51965866 + MER58A DNA MER1_type 7 71 -36 555 148 0 0 chr20 20189012 20189093 -51964789 - AluJ/FLAM SINE Alu -230 82 2 825 201 114 59 chr20 20189116 20189405 -51964477 - MLT1K LTR MaLR -272 316 12 1418 264 31 17 chr20 20189489 20189906 -51963976 - LTR16A LTR ERVL -13 437 15 325 239 43 43 chr20 20191088 20191180 -51962702 - L1MC4 LINE L1 -1339 6703 6612 188 146 49 0 chr20 20191184 20191225 -51962657 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1961 128 0 0 chr20 20191226 20191533 -51962349 - AluSx SINE Alu 0 307 1 1130 223 45 9 chr20 20191632 20192115 -51961767 + MER34 LTR ERV1 11 542 0 1106 283 84 11 chr20 20192118 20192656 -51961226 - L1MC4 LINE L1 -1973 5835 5259 207 0 0 0 chr20 20192749 20192772 -51961110 + (A)n Simple_repeat Simple_repeat 1 23 0 228 227 34 23 chr20 20192902 20192990 -51960892 - MLT1J1 LTR MaLR 0 446 358 374 229 48 12 chr20 20193470 20193553 -51960329 + L2 LINE L2 3223 3308 -5 25 0 0 0 chr20 20194226 20194251 -51959631 + AT_rich Low_complexity Low_complexity 1 25 0 759 277 43 18 chr20 20194659 20194988 -51958894 - MER46C DNA MER2_type 0 338 2 233 269 0 0 chr20 20195013 20195080 -51958802 + CT-rich Low_complexity Low_complexity 1 67 0 513 216 178 38 chr20 20196073 20196286 -51957596 - MLT1H LTR MaLR -302 247 5 231 320 99 37 chr20 20196300 20196572 -51957310 - L1ME LINE L1 -508 5613 5325 2512 152 30 15 chr20 20196881 20197394 -51956488 + L1MA4 LINE L1 5617 6171 0 486 213 58 146 chr20 20197860 20197904 -51955978 + MLT2C1 LTR ERVL 28 74 -323 2536 166 46 65 chr20 20197904 20198469 -51955413 - MLT2B3 LTR ERVL 0 554 1 486 213 58 146 chr20 20198469 20198604 -51955278 + MLT2C1 LTR ERVL 74 219 -178 441 0 0 0 chr20 20198604 20198653 -51955229 + (TG)n Simple_repeat Simple_repeat 1 49 0 198 0 0 0 chr20 20198652 20198674 -51955208 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 486 213 58 146 chr20 20198653 20198855 -51955027 + MLT2C1 LTR ERVL 219 357 -40 240 219 16 94 chr20 20201193 20201385 -51952497 + C-rich Low_complexity Low_complexity 3 179 0 237 282 0 42 chr20 20202711 20202782 -51951100 + G-rich Low_complexity Low_complexity 1 68 0 576 208 157 59 chr20 20203076 20203312 -51950570 - L1ME1 LINE L1 -6 6160 5902 440 248 26 0 chr20 20203334 20203451 -51950431 - MER69 DNA AcHobo -215 2311 2192 303 224 105 13 chr20 20203720 20203796 -51950086 - MER69 DNA AcHobo -2443 83 1 1779 187 171 78 chr20 20205821 20206544 -51947338 + LTR50 LTR ERVL 2 792 -3 221 204 0 23 chr20 20206850 20206894 -51946988 + MIR3 SINE MIR 151 193 -15 3305 122 27 0 chr20 20207984 20208468 -51945414 - LOR1a LTR ERV1 0 497 1 271 314 145 54 chr20 20209322 20209730 -51944152 + L2 LINE L2 2869 3313 0 234 167 37 0 chr20 20211798 20211852 -51942030 + A-rich Low_complexity Low_complexity 5 60 0 358 222 33 11 chr20 20213402 20213492 -51940390 - MIR3 SINE MIR -24 184 93 1279 143 125 5 chr20 20215591 20215807 -51938075 + AluJb SINE Alu 39 280 -32 351 0 0 0 chr20 20215807 20215846 -51938036 + (CAAT)n Simple_repeat Simple_repeat 4 42 0 477 219 225 28 chr20 20216807 20216985 -51936897 + MER20 DNA MER1_type 1 213 -6 2327 97 0 7 chr20 20217201 20217501 -51936381 - AluSx SINE Alu -14 298 1 307 190 160 20 chr20 20217505 20217605 -51936277 - L1MA10 LINE L1 -41 6293 6180 1255 272 25 11 chr20 20219008 20219376 -51934506 - L1ME3A LINE L1 -3 6167 5795 197 65 32 0 chr20 20219594 20219625 -51934257 + (TA)n Simple_repeat Simple_repeat 1 32 0 242 298 38 30 chr20 20222682 20222813 -51931069 - MIR SINE MIR -65 197 66 243 0 0 0 chr20 20222987 20223014 -51930868 + (TG)n Simple_repeat Simple_repeat 1 27 0 23 68 0 0 chr20 20223272 20223316 -51930566 + AT_rich Low_complexity Low_complexity 1 44 0 207 330 50 0 chr20 20223830 20223930 -51929952 - L2 LINE L2 0 3272 3168 267 291 74 139 chr20 20224087 20224166 -51929716 - L2 LINE L2 0 3272 3189 2318 113 0 3 chr20 20224166 20224477 -51929405 - AluSx SINE Alu -1 311 2 267 291 74 139 chr20 20224477 20224830 -51929052 - L2 LINE L2 -83 3189 2868 568 196 18 0 chr20 20225244 20225356 -51928526 - MER58 DNA MER1_type 0 2420 2307 1468 260 31 18 chr20 20225782 20226163 -51927719 - MLT1E2 LTR MaLR 0 626 241 1671 245 40 23 chr20 20226163 20226644 -51927238 + MER65B LTR ERV1 1 489 -42 300 220 144 17 chr20 20226674 20226775 -51927107 - MLT1E2 LTR MaLR -366 258 122 937 171 42 74 chr20 20227122 20227338 -51926544 + MER3 DNA MER1_type 1 209 0 23 0 0 0 chr20 20227415 20227438 -51926444 + AT_rich Low_complexity Low_complexity 1 23 0 1986 143 13 10 chr20 20227680 20227988 -51925894 + AluJb SINE Alu 1 309 -3 360 211 77 10 chr20 20228033 20228137 -51925745 - L1MC4a LINE L1 -1881 5927 5817 418 288 16 16 chr20 20228196 20228321 -51925561 + L2 LINE L2 3184 3308 -5 694 225 63 60 chr20 20228339 20228544 -51925338 - L1MC4a LINE L1 -523 5651 5512 309 186 22 125 chr20 20228935 20229093 -51924789 + MLT1E LTR MaLR 20 202 -347 589 243 21 21 chr20 20229137 20229281 -51924601 + MLT1H1 LTR MaLR 412 555 0 366 309 111 0 chr20 20230373 20230499 -51923383 + MIR SINE MIR 84 223 -39 229 208 104 0 chr20 20230797 20230845 -51923037 + Tigger5 DNA MER2_type 2271 2323 0 266 146 104 0 chr20 20231034 20231082 -51922800 + Tigger5 DNA MER2_type 2271 2323 0 2422 112 37 3 chr20 20231105 20231453 -51922429 - MER47A DNA MER2_type -1 365 6 2231 63 42 0 chr20 20231717 20232004 -51921878 + AluY SINE Alu 1 299 -12 2071 236 109 45 chr20 20235144 20235979 -51917903 + HAL1 LINE L1 1139 2026 -481 392 216 91 87 chr20 20236090 20236298 -51917584 + HAL1 LINE L1 2257 2465 -42 453 329 53 20 chr20 20236502 20236803 -51917079 - LTR16C LTR ERVL -70 421 111 262 270 29 6 chr20 20237514 20237688 -51916194 + (TA)n Simple_repeat Simple_repeat 1 178 0 23 33 0 0 chr20 20237709 20237739 -51916143 + AT_rich Low_complexity Low_complexity 1 30 0 1925 209 29 55 chr20 20238897 20239423 -51914459 + MLT2B1 LTR ERVL 2 513 -7 2397 82 0 13 chr20 20239556 20239862 -51914020 + AluY SINE Alu 1 302 -9 339 339 136 15 chr20 20239919 20240249 -51913633 + L2 LINE L2 2492 2861 -453 367 248 15 75 chr20 20240257 20240390 -51913492 + MER5A DNA MER1_type 63 187 -2 257 280 21 105 chr20 20240262 20240405 -51913477 - MER5A DNA MER1_type -56 133 3 * 1317 108 0 0 chr20 20240534 20240719 -51913163 - L1P LINE L1 -2668 3478 3294 1416 238 98 49 chr20 20240815 20241362 -51912520 + L1MC5 LINE L1 7274 7807 -154 228 67 0 0 chr20 20241362 20241392 -51912490 + (TG)n Simple_repeat Simple_repeat 1 30 0 1416 238 98 49 chr20 20241392 20241492 -51912390 + L1MC5 LINE L1 7807 7901 -60 233 255 0 0 chr20 20242617 20242668 -51911214 + T-rich Low_complexity Low_complexity 1 51 0 5815 186 77 23 chr20 20242816 20243803 -51910079 - L1MC1 LINE L1 -5 6328 5397 2284 96 20 0 chr20 20243803 20244095 -51909787 - AluSx SINE Alu -14 298 1 5815 186 77 23 chr20 20244095 20245169 -51908713 - L1MC1 LINE L1 -936 5397 4126 664 293 74 0 chr20 20245238 20245467 -51908415 - MIR SINE MIR 0 262 17 477 267 60 7 chr20 20245522 20245672 -51908210 - MIR SINE MIR -56 206 49 327 284 101 50 chr20 20245764 20246042 -51907840 - L2 LINE L2 -7 3306 3015 2034 206 44 76 chr20 20247302 20247553 -51906329 + MER90 LTR ERV1 69 326 -288 3446 119 65 0 chr20 20247553 20248092 -51905790 - L1MA4 LINE L1 -6 6294 5721 2034 206 44 76 chr20 20248092 20248404 -51905478 + MER90 LTR ERV1 326 614 0 289 265 0 0 chr20 20248875 20248943 -51904939 + (CAT)n Simple_repeat Simple_repeat 1 68 0 527 268 168 10 chr20 20248950 20249159 -51904723 - MIR SINE MIR -6 256 15 637 147 129 17 chr20 20249725 20249950 -51903932 + MER5C DNA MER1_type 1 321 -3 230 214 48 12 chr20 20250040 20250124 -51903758 + (TA)n Simple_repeat Simple_repeat 1 87 0 354 223 128 0 chr20 20250408 20250502 -51903380 + L2 LINE L2 3207 3312 -1 382 316 94 26 chr20 20250628 20250862 -51903020 + MIR SINE MIR 5 254 -8 381 184 0 26 chr20 20250877 20250953 -51902929 + MER116 DNA Mariner 7 80 0 210 337 0 56 chr20 20252031 20252120 -51901762 + L2 LINE L2 3186 3269 -3 2128 135 3 0 chr20 20253352 20253663 -51900219 + AluSx SINE Alu 1 312 0 252 331 123 8 chr20 20254654 20254784 -51899098 + MIR3 SINE MIR 11 155 -53 3224 244 25 14 chr20 20255575 20256428 -51897454 - L1ME3A LINE L1 -12 6158 5297 234 331 107 24 chr20 20256668 20256837 -51897045 + MIR SINE MIR 9 191 -71 246 314 76 0 chr20 20257483 20257588 -51896294 - MIR SINE MIR -55 153 41 364 197 0 0 chr20 20258245 20258311 -51895571 - MER116 DNA Mariner 0 80 15 3949 162 102 56 chr20 20260557 20261534 -51892348 + L1MC3 LINE L1 6745 7766 -19 2037 220 65 61 chr20 20261517 20262499 -51891383 + L1MCa LINE L1 10 995 -5050 * 662 239 91 68 chr20 20262729 20263432 -51890450 + HAL1b LINE L1 482 1341 -7 487 321 18 18 chr20 20263518 20263686 -51890196 + MIR3 SINE MIR 33 200 -8 229 182 0 30 chr20 20264313 20264379 -51889503 + L1P LINE L1 4644 4707 -1439 32 0 0 0 chr20 20264584 20264616 -51889266 + AT_rich Low_complexity Low_complexity 1 32 0 375 331 90 6 chr20 20266449 20266627 -51887255 + MIR3 SINE MIR 6 198 -10 8091 160 6 23 chr20 20266845 20269118 -51884764 + L1PB1 LINE L1 3541 5791 -360 267 257 0 0 chr20 20269124 20269198 -51884684 + (TA)n Simple_repeat Simple_repeat 2 75 0 2512 70 35 35 chr20 20269198 20269214 -51884668 + L1PB1 LINE L1 5781 5796 -355 306 0 0 0 chr20 20269214 20269248 -51884634 + (CA)n Simple_repeat Simple_repeat 2 35 0 2512 70 35 35 chr20 20269248 20269602 -51884280 + L1PB1 LINE L1 5795 6151 0 346 308 15 39 chr20 20269669 20269799 -51884083 + MER5A DNA MER1_type 40 166 -23 1794 160 99 0 chr20 20270780 20271112 -51882770 - MLT1A1 LTR MaLR 0 365 1 248 161 21 97 chr20 20272671 20272764 -51881118 + L1ME LINE L1 5675 5760 -402 347 342 114 18 chr20 20274285 20274513 -51879369 + MIR SINE MIR 5 254 -8 247 284 69 10 chr20 20274977 20275079 -51878803 + L2 LINE L2 2260 2367 -947 773 297 150 11 chr20 20275084 20275605 -51878277 + L2 LINE L2 2650 3238 -75 203 229 92 64 chr20 20275938 20276047 -51877835 + L2 LINE L2 2996 3107 -206 183 350 77 26 chr20 20276124 20276241 -51877641 + L2 LINE L2 3160 3282 -31 2005 161 121 3 chr20 20276693 20277073 -51876809 + MSTB LTR MaLR 2 426 0 27 49 0 0 chr20 20278211 20278252 -51875630 + AT_rich Low_complexity Low_complexity 1 41 0 458 381 63 15 chr20 20278688 20279163 -51874719 + L2 LINE L2 2223 2720 -594 255 269 43 14 chr20 20279656 20279797 -51874085 - MER113 DNA MER1_type? -376 145 1 3110 279 257 25 chr20 20280183 20282657 -51871225 + L2 LINE L2 230 3287 -26 883 193 56 5 chr20 20283295 20283492 -51870390 - MER6B DNA MER2_type -3 207 1 281 271 59 41 chr20 20283783 20283953 -51869929 - MER5A DNA MER1_type -16 173 1 234 308 0 0 chr20 20284489 20284541 -51869341 - L2 LINE L2 -13 3259 3208 201 211 41 130 chr20 20288756 20288879 -51865003 + MIR SINE MIR 105 216 -46 375 319 9 18 chr20 20289114 20289227 -51864655 + MIR SINE MIR 31 142 -120 269 169 236 0 chr20 20290499 20290567 -51863315 + MIR SINE MIR 70 142 -66 515 269 74 12 chr20 20291566 20291808 -51862074 - Charlie8 DNA MER1_type -2146 271 4 203 238 0 0 chr20 20292672 20292714 -51861168 + GA-rich Low_complexity Low_complexity 1 42 0 1195 223 36 31 chr20 20294016 20294439 -51859443 + L1ME2 LINE L1 5750 6333 -1 653 243 96 0 chr20 20295628 20295805 -51858077 - MIR SINE MIR -2 260 67 390 193 37 9 chr20 20296231 20296340 -51857542 + MER113 DNA MER1_type? 5 116 -405 315 0 0 0 chr20 20296623 20296658 -51857224 + (CA)n Simple_repeat Simple_repeat 2 36 0 2221 92 0 7 chr20 20296809 20297101 -51856781 + AluSg SINE Alu 1 290 -20 253 327 103 51 chr20 20297472 20297628 -51856254 - MIR3 SINE MIR -16 192 29 583 198 18 0 chr20 20298119 20298230 -51855652 + MER81 DNA DNA 2 114 0 635 277 95 16 chr20 20299369 20299611 -51854271 - MIR SINE MIR 0 262 2 2096 118 0 0 chr20 20300053 20300349 -51853533 + AluY SINE Alu 1 296 -15 186 289 155 11 chr20 20300634 20300729 -51853153 + MIR SINE MIR 45 151 -75 216 296 0 0 chr20 20301049 20301103 -51852779 - L2 LINE L2 -20 3252 3199 2087 174 72 8 chr20 20301303 20301705 -51852177 + MSTA LTR MaLR 1 428 0 180 0 0 0 chr20 20301800 20301820 -51852062 + (A)n Simple_repeat Simple_repeat 1 20 0 396 294 90 77 chr20 20305102 20305479 -51848403 + L3 LINE CR1 1078 1459 -118 299 203 13 0 chr20 20305693 20305772 -51848110 + MLT1I LTR MaLR 58 137 -272 30 45 0 0 chr20 20307355 20307399 -51846483 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr20 20311606 20311628 -51842254 + AT_rich Low_complexity Low_complexity 1 22 0 225 125 0 0 chr20 20311969 20312001 -51841881 - L2 LINE L2 -22 3250 3219 2192 127 3 13 chr20 20313450 20313764 -51840118 + AluSx SINE Alu 1 311 -1 2122 118 0 0 chr20 20314855 20315143 -51838739 - AluSq SINE Alu -25 288 1 723 238 32 83 chr20 20315909 20316161 -51837721 - MER8 DNA MER2_type 0 239 1 216 315 141 49 chr20 20316577 20316761 -51837121 - L2 LINE L2 0 3272 3072 339 274 66 0 chr20 20317366 20317492 -51836390 + MIR3 SINE MIR 67 201 -7 371 275 85 50 chr20 20318065 20318277 -51835605 + MIR SINE MIR 6 233 -29 1640 169 7 4 chr20 20319423 20319558 -51834324 + AluJo SINE Alu 1 134 -178 225 0 0 0 chr20 20319558 20319583 -51834299 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1640 169 7 4 chr20 20319583 20319725 -51834157 + AluJo SINE Alu 134 279 -33 262 246 43 0 chr20 20319726 20319795 -51834087 - MIR3 SINE MIR -48 160 89 280 247 33 27 chr20 20320368 20320621 -51833261 + GA-rich Low_complexity Low_complexity 1 254 0 22 0 0 0 chr20 20322472 20322494 -51831388 + AT_rich Low_complexity Low_complexity 1 22 0 222 37 0 0 chr20 20324290 20324317 -51829565 + (GA)n Simple_repeat Simple_repeat 1 27 0 824 174 15 0 chr20 20325148 20325280 -51828602 - AluJb SINE Alu -21 291 158 532 327 31 18 chr20 20325302 20325528 -51828354 - MIR SINE MIR -17 245 17 236 304 304 0 chr20 20326107 20326245 -51827637 - MIR SINE MIR -71 191 12 279 277 143 87 chr20 20326315 20326546 -51827336 - L2 LINE L2 -17 3255 3012 207 349 147 22 chr20 20326612 20326844 -51827038 - L2 LINE L2 -457 2857 2597 273 348 22 0 chr20 20326938 20327027 -51826855 + L2 LINE L2 3143 3233 -39 2351 94 0 0 chr20 20327060 20327357 -51826525 + AluSq SINE Alu 1 297 -16 224 226 21 86 chr20 20327456 20327549 -51826333 - L2 LINE L2 -787 2527 2441 316 287 118 15 chr20 20327634 20327770 -51826112 + MIR SINE MIR 80 229 -33 313 270 189 0 chr20 20327922 20328033 -51825849 - MIR SINE MIR -6 256 125 502 358 76 40 chr20 20328118 20328699 -51825183 - L2 LINE L2 -955 2359 1758 284 325 118 18 chr20 20328869 20329038 -51824844 + MIR SINE MIR 7 192 -70 915 229 41 0 chr20 20331340 20331510 -51822372 + MER45A DNA AcHobo 2 178 0 23 0 0 0 chr20 20332419 20332442 -51821440 + AT_rich Low_complexity Low_complexity 1 23 0 223 291 94 16 chr20 20332649 20332776 -51821106 - MIR3 SINE MIR -59 149 13 226 275 257 37 chr20 20333535 20333909 -51819973 - L2 LINE L2 -40 3273 2818 293 222 86 34 chr20 20335165 20335282 -51818600 + L1ME4a LINE L1 5830 5952 -169 419 318 38 101 chr20 20335766 20336084 -51817798 - L2 LINE L2 -64 3208 2911 1092 104 0 0 chr20 20337322 20337528 -51816354 + (GGGGA)n Simple_repeat Simple_repeat 1 206 0 394 267 95 61 chr20 20338008 20338270 -51815612 + L1ME4a LINE L1 5513 5783 -338 1176 138 19 38 chr20 20338303 20338513 -51815369 + MER1B DNA MER1_type 134 339 0 312 278 73 104 chr20 20338516 20338843 -51815039 + L1ME4a LINE L1 5777 6093 -28 410 339 119 45 chr20 20340068 20340472 -51813410 - L2 LINE L2 -10 3262 2829 197 323 148 32 chr20 20341501 20341656 -51812226 + L2 LINE L2 3098 3270 -2 290 275 76 72 chr20 20341838 20342089 -51811793 + L2 LINE L2 2346 2597 -717 3566 171 70 12 chr20 20342426 20343117 -51810765 + L1MB3 LINE L1 5413 6143 -40 800 299 148 33 chr20 20343822 20344597 -51809285 + L2 LINE L2 2373 3309 -4 199 352 99 14 chr20 20344683 20344896 -51808986 - L2 LINE L2 -214 3058 2828 184 333 97 0 chr20 20345818 20345890 -51807992 + MIR3 SINE MIR 113 191 -17 333 231 231 0 chr20 20346145 20346253 -51807629 + MIR SINE MIR 124 256 -6 279 197 53 77 chr20 20346339 20346482 -51807400 - MIR SINE MIR -5 203 72 316 246 169 35 chr20 20349300 20349442 -51804440 + L3 LINE CR1 1348 1508 -69 622 287 77 45 chr20 20349895 20350205 -51803677 + MER102b DNA MER1_type 1 320 -21 291 377 0 0 chr20 20350218 20350324 -51803558 + L2 LINE L2 2253 2358 -956 529 271 19 26 chr20 20351060 20351215 -51802667 - L2 LINE L2 -5 3308 3155 782 371 45 19 chr20 20351419 20352061 -51801821 - L2 LINE L2 -383 2931 2273 332 300 0 0 chr20 20352098 20352188 -51801694 + L1MC4 LINE L1 6614 6703 -1339 238 311 0 0 chr20 20352198 20352288 -51801594 + L1MC4 LINE L1 6614 6703 -1339 209 143 0 41 chr20 20352293 20352342 -51801540 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 229 275 0 44 chr20 20352342 20352433 -51801449 + L1MC4 LINE L1 6614 6700 -1342 342 67 0 0 chr20 20352435 20352445 -51801437 + (TG)n Simple_repeat Simple_repeat 1 55 0 342 67 0 0 chr20 20352445 20352490 -51801392 + (TG)n Simple_repeat Simple_repeat 2 46 0 2283 119 9 6 chr20 20352533 20352878 -51801004 - Tigger4(Zombi) DNA MER2_type 0 2731 2386 7526 140 26 11 chr20 20352878 20354075 -51799807 - Tigger4(Zombi) DNA MER2_type -1513 1218 4 387 0 0 0 chr20 20354075 20354118 -51799764 + (TG)n Simple_repeat Simple_repeat 1 43 0 406 339 140 23 chr20 20354180 20354566 -51799316 - L2 LINE L2 -1154 2160 1730 2633 108 30 14 chr20 20354573 20354942 -51798940 - THE1C LTR MaLR 0 375 1 339 260 87 29 chr20 20355119 20355223 -51798659 + MIR3 SINE MIR 84 193 -15 26 50 0 0 chr20 20356117 20356157 -51797725 + AT_rich Low_complexity Low_complexity 1 40 0 490 167 13 0 chr20 20356949 20357027 -51796855 + Tigger5 DNA MER2_type 1 79 -2244 * 1503 135 74 0 chr20 20357016 20357246 -51796636 + Tigger5 DNA MER2_type 2077 2323 0 2926 127 28 1 chr20 20358091 20358597 -51795285 - L1P LINE L1 -743 5403 4910 2321 58 44 0 chr20 20358597 20358884 -51794998 + L1PA10 LINE L1 5862 6168 0 1274 226 82 59 chr20 20359484 20360292 -51793590 + L1MDb LINE L1 786 1619 -4787 4178 161 29 6 chr20 20360445 20361143 -51792739 + MER72 LTR ERV1 9 722 0 718 193 113 0 chr20 20361144 20361294 -51792588 - MER5A DNA MER1_type -21 168 2 21 0 0 0 chr20 20361892 20361913 -51791969 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr20 20362843 20362867 -51791015 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 361 321 120 45 chr20 20364851 20365587 -51788295 + L1 LINE L1 4443 5233 -913 223 146 49 0 chr20 20366401 20366442 -51787440 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 2722 205 96 55 chr20 20366968 20367945 -51785937 + L1MC4 LINE L1 6489 7505 -537 1812 123 148 13 chr20 20367945 20368318 -51785564 - MSTA LTR MaLR -5 423 1 286 108 44 58 chr20 20368319 20368400 -51785482 + L1MD3 LINE L1 7388 7673 -322 253 31 0 0 chr20 20368407 20368439 -51785443 - MSTA LTR MaLR -396 32 1 681 288 158 0 chr20 20368463 20368786 -51785096 + L1MC4 LINE L1 7523 7896 -146 294 158 0 0 chr20 20368794 20368851 -51785031 + L1MC4 LINE L1 7986 8042 0 24 32 0 0 chr20 20368904 20368935 -51784947 + AT_rich Low_complexity Low_complexity 1 31 0 306 50 0 0 chr20 20370320 20370360 -51783522 + MADE1 DNA Mariner 1 40 -40 652 272 111 29 chr20 20372479 20372821 -51781061 + L2 LINE L2 1491 1860 -1454 1483 240 93 113 chr20 20372828 20373652 -51780230 + L2 LINE L2 2154 2961 -353 610 222 111 0 chr20 20373702 20373855 -51780027 - MER20 DNA MER1_type -1 218 49 251 254 101 83 chr20 20373864 20374059 -51779823 + L2 LINE L2 2970 3171 -142 258 32 0 0 chr20 20374059 20374090 -51779792 + (CA)n Simple_repeat Simple_repeat 2 32 0 251 254 101 83 chr20 20374090 20374122 -51779760 + L2 LINE L2 3171 3201 -112 22 0 0 0 chr20 20374905 20374927 -51778955 + AT_rich Low_complexity Low_complexity 1 22 0 369 86 0 0 chr20 20375726 20375784 -51778098 + (CA)n Simple_repeat Simple_repeat 2 59 0 222 294 92 46 chr20 20376503 20376612 -51777270 + L2 LINE L2 3198 3311 -2 235 375 50 8 chr20 20376722 20376842 -51777040 + L2 LINE L2 3136 3260 -12 347 224 229 52 chr20 20377139 20377349 -51776533 - HAL1b LINE L1 -203 1145 899 939 256 58 83 chr20 20377351 20377871 -51776011 - HAL1b LINE L1 -768 580 74 1621 134 11 0 chr20 20379063 20379325 -51774557 + MER2 DNA MER2_type 1 265 -80 401 215 38 0 chr20 20379370 20379449 -51774433 + MER2 DNA MER2_type 264 345 0 2046 122 0 45 chr20 20379996 20380307 -51773575 + AluSx SINE Alu 1 297 -15 1633 167 52 6 chr20 20380393 20380717 -51773165 + MER44D DNA MER2_type 1 609 0 207 86 0 29 chr20 20381075 20381110 -51772772 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 809 295 229 6 chr20 20381260 20381731 -51772151 + L2 LINE L2 2448 3016 -297 2056 122 78 23 chr20 20381762 20382107 -51771775 - THE1B LTR MaLR 0 364 1 486 75 0 0 chr20 20382664 20382731 -51771151 + (CA)n Simple_repeat Simple_repeat 2 68 0 262 257 152 0 chr20 20383715 20383820 -51770062 + MER5B DNA MER1_type 50 170 -8 315 318 24 0 chr20 20383938 20384023 -51769859 - L2 LINE L2 -4 3309 3223 475 219 10 0 chr20 20384128 20384224 -51769658 - Tigger3(Golem) DNA MER2_type 0 3029 2933 1254 147 20 32 chr20 20384231 20384483 -51769399 + L1MA8 LINE L1 5972 6220 -71 180 0 0 0 chr20 20384494 20384514 -51769368 + (TA)n Simple_repeat Simple_repeat 1 20 0 208 109 22 22 chr20 20384546 20384592 -51769290 + (TA)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr20 20384606 20384628 -51769254 + AT_rich Low_complexity Low_complexity 1 22 0 204 193 53 35 chr20 20384966 20385023 -51768859 + GA-rich Low_complexity Low_complexity 6 63 0 769 204 0 0 chr20 20385145 20385287 -51768595 + MER46A DNA MER2_type 3 144 -92 534 219 45 32 chr20 20386315 20386421 -51767461 + L1ME LINE L1 5548 5658 -512 1060 248 32 30 chr20 20386421 20386760 -51767122 + MER58B DNA MER1_type 2 341 0 534 219 45 32 chr20 20386760 20386808 -51767074 + L1ME LINE L1 5658 5704 -466 273 279 0 78 chr20 20386802 20386956 -51766926 - L1MC/D LINE L1 -1985 5823 5682 * 1015 165 24 0 chr20 20387201 20387371 -51766511 + FRAM SINE Alu 1 174 -2 234 0 0 0 chr20 20387565 20387591 -51766291 + (TG)n Simple_repeat Simple_repeat 2 27 0 834 246 99 4 chr20 20387873 20388145 -51765737 + MER5C DNA MER1_type 14 311 -13 740 167 38 8 chr20 20389637 20389769 -51764113 + AluJo SINE Alu 1 136 -176 651 183 0 78 chr20 20389970 20390112 -51763770 + FLAM_A SINE Alu 1 131 -2 235 200 0 93 chr20 20390722 20390872 -51763010 + (CAA)n Simple_repeat Simple_repeat 2 137 0 249 33 0 0 chr20 20391022 20391052 -51762830 + (GA)n Simple_repeat Simple_repeat 2 31 0 362 243 21 71 chr20 20391193 20391333 -51762549 + L1MEd LINE L1 1052 1184 -4935 27 0 0 0 chr20 20391414 20391441 -51762441 + AT_rich Low_complexity Low_complexity 1 27 0 330 289 33 33 chr20 20391691 20391871 -51762011 + HAL1b LINE L1 633 812 -536 254 274 74 91 chr20 20392701 20392876 -51761006 + L2 LINE L2 3076 3247 -25 2567 68 0 0 chr20 20394699 20395009 -51758873 + AluY SINE Alu 1 310 -1 1246 181 10 10 chr20 20395211 20395415 -51758467 + AluJo SINE Alu 81 284 -28 657 258 143 61 chr20 20395762 20396389 -51757493 + L1MC4 LINE L1 5301 5979 -1829 266 244 12 0 chr20 20396500 20396582 -51757300 + (TA)n Simple_repeat Simple_repeat 2 84 0 431 277 230 9 chr20 20396971 20397184 -51756698 + L1MC4 LINE L1 6672 6931 -854 22 0 0 0 chr20 20397342 20397364 -51756518 + AT_rich Low_complexity Low_complexity 1 22 0 836 154 0 0 chr20 20397374 20397491 -51756391 - FLAM_C SINE Alu -16 117 1 24 53 0 0 chr20 20397507 20397545 -51756337 + AT_rich Low_complexity Low_complexity 1 38 0 231 304 18 9 chr20 20397613 20397725 -51756157 + L1MC4 LINE L1 7122 7234 -808 558 0 0 0 chr20 20398242 20398304 -51755578 + (CAATA)n Simple_repeat Simple_repeat 1 62 0 345 311 19 10 chr20 20398754 20398857 -51755025 - MIR SINE MIR -156 106 3 189 330 179 9 chr20 20398898 20399004 -51754878 + L2 LINE L2 1145 1268 -2046 284 250 16 0 chr20 20400811 20400875 -51753007 + GA-rich Low_complexity Low_complexity 4 68 0 315 104 0 0 chr20 20400893 20400941 -51752941 + (CA)n Simple_repeat Simple_repeat 2 49 0 180 167 95 24 chr20 20401384 20401426 -51752456 - L2 LINE L2 -92 3221 3177 1903 120 69 0 chr20 20402444 20402720 -51751162 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr20 20403203 20403231 -51750651 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr20 20403350 20403371 -51750511 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr20 20403653 20403689 -51750193 + AT_rich Low_complexity Low_complexity 1 36 0 1039 220 132 44 chr20 20404074 20404112 -51749770 + Charlie2 DNA MER1_type 68 101 -2681 2159 108 28 0 chr20 20404112 20404398 -51749484 + AluSq SINE Alu 1 294 -19 1039 220 132 44 chr20 20404398 20404745 -51749137 + Charlie2 DNA MER1_type 101 487 -2295 2021 183 25 129 chr20 20404774 20405457 -51748425 + LTR9 LTR ERV1 1 612 0 293 247 49 0 chr20 20405575 20405656 -51748226 + Charlie2a DNA MER1_type 1464 1548 -1314 1543 203 27 8 chr20 20405751 20406126 -51747756 + Charlie2a DNA MER1_type 1735 2116 -746 1600 245 67 16 chr20 20406159 20406800 -51747082 + Charlie2a DNA MER1_type 2189 2862 0 21 0 0 0 chr20 20407911 20407932 -51745950 + AT_rich Low_complexity Low_complexity 1 21 0 251 305 58 71 chr20 20407964 20408118 -51745764 + L2 LINE L2 3160 3311 -2 4161 155 48 73 chr20 20408345 20408512 -51745370 + L1MCa LINE L1 20 190 -6236 2831 83 3 0 chr20 20408512 20408875 -51745007 + THE1B LTR MaLR 1 364 0 4161 155 48 73 chr20 20408875 20409731 -51744151 + L1MCa LINE L1 190 1017 -5409 901 158 42 42 chr20 20409720 20409935 -51743947 + L1MCa LINE L1 1458 1672 -4754 * 382 196 0 0 chr20 20409926 20410018 -51743864 + L1MCa LINE L1 1880 1971 -4455 * 2462 218 37 15 chr20 20410017 20410435 -51743447 + L1MCa LINE L1 2259 2666 -3760 2294 111 0 13 chr20 20410435 20410751 -51743131 + AluSx SINE Alu 1 312 0 2462 218 37 15 chr20 20410751 20411120 -51742762 + L1MCa LINE L1 2666 3025 -3401 1988 147 3 10 chr20 20411120 20411426 -51742456 + AluJo SINE Alu 5 308 -4 2462 218 37 15 chr20 20411426 20411773 -51742109 + L1MCa LINE L1 3025 3422 -3004 4521 160 17 36 chr20 20411773 20412619 -51741263 + L1MC1 LINE L1 5446 6277 -56 1721 146 3 48 chr20 20412619 20412942 -51740940 - AluJb SINE Alu 0 310 1 4521 160 17 36 chr20 20412942 20412981 -51740901 + L1MC1 LINE L1 6277 6315 -18 765 220 77 10 chr20 20414226 20414435 -51739447 + MER58A DNA MER1_type 1 223 -1 367 275 46 15 chr20 20414440 20414571 -51739311 - MIR SINE MIR -38 224 90 207 0 0 0 chr20 20414699 20414722 -51739160 + (A)n Simple_repeat Simple_repeat 1 23 0 308 294 39 0 chr20 20415375 20415477 -51738405 - MER103 DNA DNA -50 116 11 272 222 0 16 chr20 20415526 20415589 -51738293 - L2 LINE L2 -3 3269 3208 270 356 11 78 chr20 20415707 20415898 -51737984 + MIR3 SINE MIR 19 196 -12 500 236 137 12 chr20 20416413 20416574 -51737308 + MIR SINE MIR 63 243 -19 276 318 123 49 chr20 20416590 20417036 -51736846 + MLT1J LTR MaLR 33 511 0 180 302 0 0 chr20 20417131 20417184 -51736698 + L2 LINE L2 3219 3271 -1 962 232 54 5 chr20 20417362 20417586 -51736296 - MIR SINE MIR -20 242 8 2278 79 34 0 chr20 20418900 20419192 -51734690 - AluSc SINE Alu -7 302 1 265 317 101 10 chr20 20419213 20419328 -51734554 + MIR SINE MIR 3 130 -78 199 274 65 0 chr20 20419379 20419441 -51734441 + MIR3 SINE MIR 140 205 -3 822 256 32 24 chr20 20420378 20420563 -51733319 + L1ME3A LINE L1 5412 5594 -576 2566 173 104 2 chr20 20420563 20421061 -51732821 + MER44D DNA MER2_type 2 605 0 822 256 32 24 chr20 20421061 20421282 -51732600 + L1ME3A LINE L1 5594 5812 -358 2774 112 2 15 chr20 20421282 20421676 -51732206 + L1PA10 LINE L1 5774 6162 -6 822 256 32 24 chr20 20421676 20421709 -51732173 + L1ME3A LINE L1 5812 5843 -327 2148 154 42 9 chr20 20421709 20422046 -51731836 + MER7A DNA MER2_type 1 346 0 822 256 32 24 chr20 20422046 20422292 -51731590 + L1ME3A LINE L1 5843 6150 -20 409 348 7 14 chr20 20422494 20422632 -51731250 - MIR3 SINE MIR -30 178 42 418 240 47 8 chr20 20422813 20422942 -51730940 + L1ME3 LINE L1 6028 6161 -1 220 337 20 10 chr20 20423228 20423329 -51730553 - MER5A DNA MER1_type -50 139 38 1826 146 21 0 chr20 20423356 20423636 -51730246 - AluJo SINE Alu -26 286 1 350 288 135 18 chr20 20424020 20424190 -51729692 - MIR SINE MIR -15 247 58 276 271 47 78 chr20 20425002 20425131 -51728751 + MLT1K LTR MaLR 88 212 -376 382 306 163 22 chr20 20425132 20425488 -51728394 + MLT1K LTR MaLR 155 560 -28 265 328 132 0 chr20 20425725 20425899 -51727983 - MIR SINE MIR -21 241 45 318 250 225 48 chr20 20427132 20427488 -51726394 + MLT1H LTR MaLR 107 525 -24 270 250 0 0 chr20 20427849 20427905 -51725977 - L2 LINE L2 -71 3242 3187 227 234 0 0 chr20 20428000 20428064 -51725818 - L1MC4 LINE L1 -1339 6703 6640 505 237 25 0 chr20 20428311 20428429 -51725453 + L2 LINE L2 3191 3311 -2 209 250 0 0 chr20 20428429 20428473 -51725409 + GA-rich Low_complexity Low_complexity 1 44 0 2301 96 3 0 chr20 20429117 20429408 -51724474 + AluY SINE Alu 1 292 -19 807 276 100 0 chr20 20431092 20431433 -51722449 - LTR33A LTR ERVL 0 523 149 1922 152 0 0 chr20 20431582 20431858 -51722024 + AluJb SINE Alu 23 298 -14 431 213 213 24 chr20 20431865 20431992 -51721890 - MER5A DNA MER1_type -8 181 31 2226 139 7 89 chr20 20432232 20432415 -51721467 + MLT1B LTR MaLR 1 131 -259 2009 122 23 10 chr20 20432415 20432718 -51721164 + AluSq SINE Alu 5 311 -2 2226 139 7 89 chr20 20432718 20432959 -51720923 + MLT1B LTR MaLR 131 390 0 1813 183 0 3 chr20 20437841 20438136 -51715746 - AluJb SINE Alu -18 294 1 21 36 0 0 chr20 20438891 20438919 -51714963 + AT_rich Low_complexity Low_complexity 1 28 0 405 296 114 48 chr20 20440643 20441001 -51712881 - L1MC4 LINE L1 -1879 5929 5548 208 293 28 57 chr20 20441614 20441720 -51712162 + L2 LINE L2 3210 3312 -1 248 315 99 0 chr20 20442132 20442243 -51711639 - L1MC4 LINE L1 -2241 5567 5446 254 209 19 114 chr20 20442253 20442358 -51711524 - L1ME2 LINE L1 -1 6163 6067 287 284 28 18 chr20 20442365 20442474 -51711408 - L1MC4 LINE L1 -2384 5424 5315 345 298 62 45 chr20 20443223 20443401 -51710481 + L1ME LINE L1 5386 5566 -600 2198 240 39 28 chr20 20443521 20444167 -51709715 + L1ME3A LINE L1 5517 6169 -1 2068 117 20 7 chr20 20445078 20445377 -51708505 + AluSx SINE Alu 1 303 -9 241 203 54 40 chr20 20447267 20447341 -51706541 + GA-rich Low_complexity Low_complexity 1 75 0 1837 145 10 26 chr20 20448958 20449261 -51704621 + AluJb SINE Alu 1 298 -14 446 231 94 62 chr20 20450376 20450536 -51703346 + MIR SINE MIR 7 171 -91 2128 174 0 21 chr20 20450540 20450880 -51703002 - MER1B DNA MER1_type -4 333 1 1450 282 79 36 chr20 20451177 20451964 -51701918 - L1MC4a LINE L1 -745 5401 5151 21 0 0 0 chr20 20452095 20452116 -51701766 + AT_rich Low_complexity Low_complexity 1 21 0 2254 102 0 0 chr20 20452515 20452808 -51701074 + AluSg1 SINE Alu 1 293 -16 22 0 0 0 chr20 20453453 20453475 -51700407 + AT_rich Low_complexity Low_complexity 1 22 0 626 249 28 28 chr20 20453784 20453814 -51700068 - MIR SINE MIR -12 250 221 1072 183 0 83 chr20 20453814 20454014 -51699868 + MER6B DNA MER2_type 1 181 -684 2073 131 14 0 chr20 20454014 20454304 -51699578 + AluSx SINE Alu 1 294 -18 1072 183 0 83 chr20 20454304 20454332 -51699550 + MER6B DNA MER2_type 181 210 0 626 249 28 28 chr20 20454332 20454482 -51699400 - MIR SINE MIR -40 222 70 2356 101 0 3 chr20 20455522 20455829 -51698053 + AluSq SINE Alu 1 306 -7 231 88 0 0 chr20 20456718 20456752 -51697130 + (A)n Simple_repeat Simple_repeat 1 34 0 2368 92 16 0 chr20 20456754 20457060 -51696822 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr20 20457208 20457243 -51696639 + AT_rich Low_complexity Low_complexity 1 35 0 637 266 6 12 chr20 20458884 20459057 -51694825 + MER5B DNA MER1_type 1 172 -6 336 263 132 13 chr20 20459560 20459712 -51694170 - MIR SINE MIR -46 216 47 238 349 83 12 chr20 20461172 20461341 -51692541 + MIR SINE MIR 76 256 -6 777 167 25 0 chr20 20461438 20461558 -51692324 - FLAM_A SINE Alu -10 123 1 535 225 146 13 chr20 20461684 20461835 -51692047 - MER5A DNA MER1_type -6 183 13 14070 106 9 29 chr20 20461860 20465049 -51688833 + L1PA7 LINE L1 1 3187 -3274 10013 59 7 2 chr20 20465045 20467332 -51686550 + L1PA7 LINE L1 4170 6469 0 * 33 0 0 0 chr20 20468462 20468495 -51685387 + AT_rich Low_complexity Low_complexity 1 33 0 251 239 70 0 chr20 20468661 20468732 -51685150 - MER91C DNA MER1_type -26 114 39 1107 169 0 0 chr20 20469710 20469887 -51683995 - AluJb SINE Alu 0 312 136 345 252 27 68 chr20 20471117 20471264 -51682618 + L1MC5 LINE L1 5767 5907 -1901 359 295 150 42 chr20 20471337 20471815 -51682067 + L1MC5 LINE L1 6037 6678 -1215 2167 105 3 14 chr20 20471815 20472109 -51681773 + AluSp SINE Alu 1 291 -22 359 295 150 42 chr20 20472109 20472297 -51681585 + L1MC5 LINE L1 6678 6844 -1049 968 221 94 114 chr20 20472352 20472837 -51681045 + MLT1F1 LTR MaLR 1 500 -67 1870 168 3 3 chr20 20472837 20473146 -51680736 - AluJo SINE Alu -3 309 1 968 221 94 114 chr20 20473146 20473213 -51680669 + MLT1F1 LTR MaLR 500 567 0 1890 218 84 79 chr20 20473220 20473969 -51679913 + L1MC5 LINE L1 6850 7606 -355 2018 102 4 0 chr20 20473969 20474233 -51679649 + AluSq SINE Alu 38 302 -11 1890 218 84 79 chr20 20474233 20474422 -51679460 + L1MC5 LINE L1 7606 7793 -168 501 231 167 6 chr20 20475430 20475586 -51678296 + MER5A DNA MER1_type 9 189 0 22 0 0 0 chr20 20475694 20475716 -51678166 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr20 20476089 20476119 -51677763 + AT_rich Low_complexity Low_complexity 1 30 0 2144 110 24 0 chr20 20476124 20476416 -51677466 + AluSq SINE Alu 1 299 -14 6725 172 32 6 chr20 20476537 20477794 -51676088 - L1MA4A LINE L1 -864 5282 3994 5901 112 46 8 chr20 20477797 20478757 -51675125 + L1MA4A LINE L1 5301 6296 -7 227 273 51 74 chr20 20479197 20479453 -51674429 + L2 LINE L2 2632 2881 -433 326 293 23 15 chr20 20479541 20479674 -51674208 + L2 LINE L2 3179 3312 -1 2139 144 3 6 chr20 20479836 20480149 -51673733 - AluSx SINE Alu 0 312 1 2201 156 43 19 chr20 20480858 20481275 -51672607 + MSTA LTR MaLR 1 427 -1 2413 143 13 0 chr20 20481277 20481649 -51672233 + MSTA-int LTR MaLR 2 378 -1273 1631 130 58 0 chr20 20481649 20481910 -51671972 + MSTA LTR MaLR 153 428 0 316 161 65 54 chr20 20482921 20483014 -51670868 - MER53 DNA DNA -1 188 95 978 276 10 7 chr20 20483784 20484074 -51669808 - LTR16A LTR ERVL -2 448 158 312 349 60 7 chr20 20484302 20484451 -51669431 + L3 LINE CR1 1356 1512 -65 701 296 87 35 chr20 20484452 20485094 -51668788 - L2 LINE L2 0 3313 2621 197 263 189 0 chr20 20485196 20485291 -51668591 + MER5A DNA MER1_type 77 189 0 929 186 5 59 chr20 20485516 20485720 -51668162 - MER105 DNA DNA -11 193 1 234 280 20 60 chr20 20485956 20486056 -51667826 - MIR SINE MIR -64 144 49 274 291 78 82 chr20 20486283 20486473 -51667409 + L2 LINE L2 2836 3025 -247 2204 122 10 0 chr20 20486473 20486777 -51667105 + AluSq SINE Alu 1 307 -6 274 291 78 82 chr20 20486777 20486998 -51666884 + L2 LINE L2 3025 3245 -27 243 0 0 0 chr20 20487000 20487027 -51666855 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 850 173 0 0 chr20 20487394 20487527 -51666355 + AluSq/x SINE Alu 1 133 -180 2285 106 0 0 chr20 20487528 20487820 -51666062 + AluSx SINE Alu 1 292 -20 216 284 90 0 chr20 20488319 20488386 -51665496 + MIR SINE MIR 47 119 -143 433 268 39 8 chr20 20488544 20488671 -51665211 - L2 LINE L2 -1 3312 3182 2123 114 0 0 chr20 20488909 20489222 -51664660 - AluSx SINE Alu 0 313 1 471 228 26 0 chr20 20490021 20490135 -51663747 + MER5B DNA MER1_type 6 122 -56 1547 168 26 68 chr20 20490529 20490881 -51663001 + MER1B DNA MER1_type 1 337 0 4870 17 0 0 chr20 20491187 20491730 -51662152 - L1PA2 LINE L1 -2 6153 5611 5742 18 0 7 chr20 20491730 20492627 -51661255 + L1PA2 LINE L1 4729 5619 -536 2001 141 16 7 chr20 20492671 20492976 -51660906 - AluJb SINE Alu -4 308 1 351 200 47 12 chr20 20493030 20493115 -51660767 + Charlie8 DNA MER1_type 69 156 -2261 2278 105 10 0 chr20 20493269 20493574 -51660308 - AluSq SINE Alu -5 308 1 345 224 12 0 chr20 20494815 20494894 -51658988 + Charlie1 DNA MER1_type 56 122 -2639 26 0 0 0 chr20 20494936 20494962 -51658920 + AT_rich Low_complexity Low_complexity 1 26 0 1937 98 25 0 chr20 20494966 20495211 -51658671 - AluSq SINE Alu -62 251 1 551 244 9 0 chr20 20495872 20495987 -51657895 + MER52A LTR ERV1 3 118 -1637 7550 160 31 13 chr20 20496020 20497283 -51656599 + MER52A LTR ERV1 466 1751 -4 344 298 88 22 chr20 20497342 20497523 -51656359 - MIR SINE MIR -12 250 58 266 313 135 0 chr20 20498507 20498603 -51655279 + L2 LINE L2 3162 3270 -2 469 286 199 1 chr20 20498643 20498992 -51654890 + L2 LINE L2 2642 3065 -248 876 152 54 27 chr20 20499082 20499266 -51654616 + MER33 DNA MER1_type 1 189 -135 21 57 0 0 chr20 20499270 20499305 -51654577 + AT_rich Low_complexity Low_complexity 1 35 0 369 302 24 66 chr20 20499325 20499338 -51654544 - MIR SINE MIR -27 235 223 2231 104 3 0 chr20 20499338 20499625 -51654257 - AluSx SINE Alu -24 288 1 369 302 24 66 chr20 20499625 20499823 -51654059 - MIR SINE MIR -39 223 33 478 330 123 20 chr20 20499997 20500346 -51653536 - L2 LINE L2 -5 3308 2924 318 245 119 33 chr20 20500466 20500617 -51653265 + MLT1J2 LTR MaLR 73 236 -214 2026 131 20 3 chr20 20500770 20501067 -51652815 + AluSx SINE Alu 5 306 -6 26 0 0 0 chr20 20501142 20501168 -51652714 + AT_rich Low_complexity Low_complexity 1 26 0 266 105 26 0 chr20 20501210 20501248 -51652634 + Charlie8 DNA MER1_type 1390 1428 -989 185 65 32 0 chr20 20501609 20501640 -51652242 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1594 164 0 48 chr20 20501645 20501937 -51651945 + AluJo SINE Alu 15 292 -20 743 212 45 87 chr20 20501943 20502240 -51651642 + L1MD3 LINE L1 6195 6359 0 1562 145 104 22 chr20 20502678 20502947 -51650935 + AluJb SINE Alu 9 299 -13 278 183 157 70 chr20 20503071 20503153 -51650729 - MER112 DNA MER1_type -4 256 160 2098 116 0 14 chr20 20503153 20503447 -51650435 + AluSx SINE Alu 1 290 -22 278 183 157 70 chr20 20503447 20503479 -51650403 - MER112 DNA MER1_type -100 160 132 2532 174 81 20 chr20 20503755 20504314 -51649568 + L1MD3 LINE L1 7402 7994 -1 320 286 98 8 chr20 20504735 20504868 -51649014 - L2 LINE L2 -8 3305 3161 265 220 85 59 chr20 20504983 20505101 -51648781 + MIR SINE MIR 108 228 -34 1795 38 0 0 chr20 20506341 20506550 -51647332 - L1PA4 LINE L1 -261 5893 5685 2360 18 0 4 chr20 20506550 20506822 -51647060 + L1PA4 LINE L1 5883 6155 0 21 0 0 0 chr20 20507236 20507257 -51646625 + AT_rich Low_complexity Low_complexity 1 21 0 663 209 0 7 chr20 20507296 20507435 -51646447 - Charlie1 DNA MER1_type -1 2760 2623 898 222 26 11 chr20 20507448 20507637 -51646245 - Charlie1 DNA MER1_type -2569 192 1 196 324 37 44 chr20 20507637 20507773 -51646109 - MIR3 SINE MIR -67 141 7 183 213 16 33 chr20 20507977 20508038 -51645844 + L2 LINE L2 2423 2482 -832 433 271 26 19 chr20 20508125 20508280 -51645602 + L1ME4a LINE L1 5962 6117 -4 608 248 64 15 chr20 20508657 20508859 -51645023 - MIR SINE MIR 0 262 51 371 246 98 16 chr20 20508926 20509048 -51644834 + MER3 DNA MER1_type 78 209 0 200 219 68 55 chr20 20509261 20509334 -51644548 + MIR SINE MIR 43 116 -92 2411 55 3 7 chr20 20509819 20510109 -51643773 + AluY SINE Alu 5 293 -18 184 200 0 0 chr20 20510466 20510501 -51643381 + L2 LINE L2 3227 3261 -11 192 260 10 73 chr20 20510562 20510658 -51643224 - MIR SINE MIR 0 262 173 1983 130 0 19 chr20 20510688 20510995 -51642887 + AluJo SINE Alu 12 312 0 347 235 88 47 chr20 20511031 20511054 -51642828 + MIR SINE MIR 86 107 -155 1836 168 45 31 chr20 20511054 20511412 -51642470 + MLT1A1 LTR MaLR 1 363 -2 347 235 88 47 chr20 20511412 20511558 -51642324 + MIR SINE MIR 107 262 0 225 0 0 0 chr20 20512116 20512141 -51641741 + (TG)n Simple_repeat Simple_repeat 2 26 0 227 296 42 21 chr20 20512240 20512382 -51641500 - L1ME LINE L1 -302 5819 5675 2201 92 14 0 chr20 20513777 20514070 -51639812 - AluY SINE Alu -14 297 1 23 0 0 0 chr20 20515345 20515368 -51638514 + GC_rich Low_complexity Low_complexity 1 23 0 189 147 0 0 chr20 20515937 20515971 -51637911 - MIR SINE MIR -119 143 110 2405 67 34 0 chr20 20516228 20516525 -51637357 - AluSx SINE Alu -5 307 1 209 306 194 0 chr20 20517688 20517822 -51636060 - MER5A DNA MER1_type -1 188 29 1824 147 0 33 chr20 20517921 20518227 -51635655 + AluSx SINE Alu 1 296 -16 282 307 29 15 chr20 20518274 20518411 -51635471 - MLT1H LTR MaLR -3 546 408 677 180 68 12 chr20 20518645 20518806 -51635076 + Charlie4 DNA MER1_type 1788 1957 -4 411 73 0 0 chr20 20518859 20518914 -51634968 + (TA)n Simple_repeat Simple_repeat 2 56 0 2588 58 6 6 chr20 20518916 20519229 -51634653 - AluSq SINE Alu 0 313 1 187 200 0 80 chr20 20519509 20519559 -51634323 + MIR SINE MIR 98 143 -119 2247 124 0 0 chr20 20520016 20520323 -51633559 - AluSx SINE Alu -5 307 1 188 370 43 27 chr20 20520773 20520957 -51632925 - L2 LINE L2 -222 3050 2864 1073 270 61 40 chr20 20520985 20521463 -51632419 + MLT1H LTR MaLR 39 526 -23 231 297 16 0 chr20 20523328 20523392 -51630490 - MIR SINE MIR -158 104 40 2625 139 110 0 chr20 20523561 20523999 -51629883 - MER66B LTR ERV1 0 486 1 294 29 0 0 chr20 20524140 20524175 -51629707 + (CA)n Simple_repeat Simple_repeat 1 35 0 * 342 0 0 0 chr20 20524174 20524212 -51629670 + (TC)n Simple_repeat Simple_repeat 2 39 0 492 219 71 17 chr20 20524256 20524403 -51629479 - L1ME3 LINE L1 0 6164 6018 2765 205 88 14 chr20 20524436 20525099 -51628783 - L1ME1 LINE L1 -7 6159 5448 423 0 0 0 chr20 20525555 20525602 -51628280 + (CA)n Simple_repeat Simple_repeat 2 48 0 28 48 0 0 chr20 20526066 20526108 -51627774 + AT_rich Low_complexity Low_complexity 1 42 0 820 277 175 37 chr20 20526498 20526524 -51627358 - MLT1J LTR MaLR -52 459 438 2051 125 33 10 chr20 20526524 20526829 -51627053 + AluSx SINE Alu 1 312 0 820 277 175 37 chr20 20526829 20527203 -51626679 - MLT1J LTR MaLR -73 438 4 2104 114 3 43 chr20 20527280 20527604 -51626278 - AluSx SINE Alu -1 311 1 662 244 60 78 chr20 20527639 20527958 -51625924 - L1ME3 LINE L1 -2177 5631 5319 1816 167 3 0 chr20 20528110 20528423 -51625459 + AluSx SINE Alu 2 315 0 1960 133 65 47 chr20 20529435 20529818 -51624064 + MLT1B LTR MaLR 1 390 0 994 265 105 8 chr20 20529905 20530278 -51623604 - LTR16A LTR ERVL -25 425 17 391 191 24 24 chr20 20530621 20530705 -51623177 - MLT1K LTR MaLR -493 95 12 283 278 150 8 chr20 20530719 20530852 -51623030 + MIR SINE MIR 40 191 -71 345 283 18 0 chr20 20530852 20530965 -51622917 + (TA)n Simple_repeat Simple_repeat 2 116 0 1616 191 17 0 chr20 20531125 20531413 -51622469 + AluJo SINE Alu 1 293 -19 1768 101 97 4 chr20 20531514 20531792 -51622090 - AluSx SINE Alu 0 302 1 32 0 0 0 chr20 20531839 20531871 -51622011 + AT_rich Low_complexity Low_complexity 1 32 0 3347 150 19 78 chr20 20533294 20534014 -51619868 - L1MB3 LINE L1 -16 6167 5490 21 36 0 0 chr20 20534315 20534343 -51619539 + AT_rich Low_complexity Low_complexity 1 28 0 534 282 84 29 chr20 20534363 20534935 -51618947 + L1M4 LINE L1 5219 5817 -361 189 107 0 0 chr20 20535314 20535342 -51618540 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4936 195 31 61 chr20 20535492 20535840 -51618042 + L1MB7 LINE L1 4029 4386 -1798 1789 173 0 16 chr20 20535840 20536153 -51617729 + AluSx SINE Alu 1 308 -4 4936 195 31 61 chr20 20536153 20537668 -51616214 + L1MB7 LINE L1 4386 5818 -366 964 175 0 29 chr20 20537668 20537839 -51616043 + FRAM SINE Alu 1 166 0 4936 195 31 61 chr20 20537839 20538186 -51615696 + L1MB7 LINE L1 5818 6174 -10 1076 127 0 0 chr20 20538744 20538886 -51614996 + AluSx SINE Alu 1 142 -171 1082 171 0 0 chr20 20539102 20539272 -51614610 + AluSx SINE Alu 127 296 -14 24 0 0 0 chr20 20539628 20539652 -51614230 + AT_rich Low_complexity Low_complexity 1 24 0 242 131 0 2 chr20 20540193 20540323 -51613559 + AluSq SINE Alu 131 291 -10 2371 90 3 3 chr20 20541103 20541403 -51612479 + AluSg SINE Alu 1 300 -10 1559 130 157 0 chr20 20542063 20542324 -51611558 - AluSx SINE Alu 0 302 1 506 248 8 8 chr20 20542382 20542507 -51611375 + L1MD2 LINE L1 6225 6349 -10 24 0 0 0 chr20 20542536 20542560 -51611322 + AT_rich Low_complexity Low_complexity 1 24 0 582 236 8 0 chr20 20542722 20542845 -51611037 - FLAM_A SINE Alu -9 124 1 258 262 0 16 chr20 20542845 20542906 -51610976 - L2 LINE L2 -6 3307 3248 343 247 34 0 chr20 20544293 20544382 -51609500 + MIR SINE MIR 86 177 -85 1605 184 39 0 chr20 20544489 20544604 -51609278 + AluJb SINE Alu 1 110 -202 180 0 0 0 chr20 20544604 20544624 -51609258 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1605 184 39 0 chr20 20544624 20544791 -51609091 + AluJb SINE Alu 110 294 -18 258 301 12 0 chr20 20544909 20544992 -51608890 + (TA)n Simple_repeat Simple_repeat 2 85 0 601 278 62 9 chr20 20545643 20545870 -51608012 - MIR SINE MIR -3 259 21 1171 199 124 4 chr20 20545927 20546193 -51607689 + AluJo SINE Alu 2 299 -3 582 246 67 97 chr20 20546973 20547355 -51606527 - MLT1J LTR MaLR 0 511 220 1738 244 95 18 chr20 20547488 20548036 -51605846 + MLT1G LTR MaLR 1 590 0 577 262 30 10 chr20 20548813 20549140 -51604742 - MLT1I LTR MaLR -2 407 47 186 324 14 14 chr20 20549387 20549461 -51604421 + MIR SINE MIR 55 128 -80 499 250 207 9 chr20 20550719 20550951 -51602931 + L1ME3A LINE L1 5827 6104 -66 254 333 155 32 chr20 20551038 20551257 -51602625 + L2 LINE L2 3021 3266 -6 543 336 151 36 chr20 20551446 20552363 -51601519 + L2 LINE L2 1845 2866 -448 2183 110 3 0 chr20 20552409 20552715 -51601167 + AluSx SINE Alu 2 308 0 296 261 77 23 chr20 20554202 20554332 -51599550 + MLT1K LTR MaLR 341 477 -111 363 284 11 0 chr20 20554619 20554714 -51599168 - MIR SINE MIR -140 122 27 322 206 0 0 chr20 20556043 20556111 -51597771 + MER5A DNA MER1_type 42 109 -80 806 220 17 0 chr20 20556170 20556347 -51597535 - MER5A DNA MER1_type 0 189 10 861 176 111 42 chr20 20556378 20556640 -51597242 - MER5C DNA MER1_type -18 306 27 1401 199 126 65 chr20 20556644 20556891 -51596991 + Charlie1b DNA MER1_type 1 232 -2529 1577 164 49 28 chr20 20556891 20557177 -51596705 + AluJo SINE Alu 1 292 -20 1401 199 126 65 chr20 20557177 20557422 -51596460 + Charlie1b DNA MER1_type 232 523 0 247 303 147 24 chr20 20557649 20557860 -51596022 - MLT1L LTR MaLR 0 615 379 444 214 45 13 chr20 20557943 20558085 -51595797 - MLT1L LTR MaLR -365 146 1 284 250 15 0 chr20 20558092 20558160 -51595722 + L2 LINE L2 3204 3272 0 325 278 135 35 chr20 20558530 20558818 -51595064 - L1ME4a LINE L1 -47 6074 5758 1212 296 75 12 chr20 20558855 20559284 -51594598 - LTR16B LTR ERVL 0 464 9 1161 221 91 27 chr20 20559830 20560160 -51593722 - LTR16A1 LTR ERVL -16 441 91 399 68 0 149 chr20 20560166 20560184 -51593698 - LTR26B LTR ERV1 -339 192 173 2170 136 0 13 chr20 20560184 20560500 -51593382 + AluSx SINE Alu 1 312 0 399 68 0 149 chr20 20560500 20560555 -51593327 - LTR26B LTR ERV1 -358 173 130 2213 108 0 14 chr20 20560555 20560851 -51593031 + AluSx SINE Alu 1 292 -20 3106 143 0 41 chr20 20560891 20561138 -51592744 + LTR26B LTR ERV1 41 258 -273 2534 49 0 7 chr20 20561138 20561444 -51592438 + AluY SINE Alu 1 304 -7 3106 143 0 41 chr20 20561444 20561708 -51592174 + LTR26B LTR ERV1 258 531 0 652 217 32 95 chr20 20561712 20561901 -51591981 - MLT1J LTR MaLR -236 275 99 212 339 68 36 chr20 20562206 20562427 -51591455 - L2 LINE L2 -213 3059 2832 746 260 17 0 chr20 20562521 20562698 -51591184 - AluJo SINE Alu -14 298 119 531 257 30 83 chr20 20562698 20563010 -51590872 + LTR16C LTR ERVL 107 478 -13 184 255 0 0 chr20 20563134 20563181 -51590701 + L2 LINE L2 3267 3313 0 865 183 116 88 chr20 20563628 20563686 -51590196 + LTR8A LTR ERV1 287 342 -385 1442 181 61 20 chr20 20563686 20563979 -51589903 + AluJo SINE Alu 1 305 -7 865 183 116 88 chr20 20563979 20564290 -51589592 + LTR8A LTR ERV1 342 727 0 4202 126 12 66 chr20 20565181 20565575 -51588307 - LTR8 LTR ERV1 0 691 352 2362 44 30 14 chr20 20565575 20565870 -51588012 - AluY SINE Alu -11 300 1 4202 126 12 66 chr20 20565870 20566205 -51587677 - LTR8 LTR ERV1 -339 352 1 338 236 154 0 chr20 20566410 20566520 -51587362 + MIR SINE MIR 13 139 -123 261 0 0 0 chr20 20566761 20566790 -51587092 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 583 154 116 95 chr20 20566964 20567378 -51586504 + LTR29 LTR ERV1 1 563 -59 200 143 24 0 chr20 20567580 20567622 -51586260 + CT-rich Low_complexity Low_complexity 1 43 0 2277 96 20 0 chr20 20567958 20568250 -51585632 + AluSg SINE Alu 13 310 0 4012 179 8 19 chr20 20568418 20568847 -51585035 + MER72 LTR ERV1 9 428 -294 1567 178 74 4 chr20 20568847 20569117 -51584765 - AluJb SINE Alu -23 289 1 4012 179 8 19 chr20 20569117 20569409 -51584473 + MER72 LTR ERV1 428 722 0 2769 120 9 21 chr20 20569791 20570026 -51583856 - MSTA LTR MaLR 0 428 199 2234 112 0 3 chr20 20570026 20570329 -51583553 - AluSg SINE Alu -8 302 1 2769 120 9 21 chr20 20570329 20570525 -51583357 - MSTA LTR MaLR -229 199 2 751 287 163 0 chr20 20571501 20571839 -51582043 - LTR16C LTR ERVL -92 399 7 1084 119 55 82 chr20 20572077 20572296 -51581586 - AluSg/x SINE Alu -16 294 82 304 330 63 6 chr20 20572451 20572608 -51581274 - MIR SINE MIR -54 208 45 1192 265 85 9 chr20 20573041 20573464 -51580418 - LTR16A1 LTR ERVL -2 455 1 2087 113 0 52 chr20 20573532 20573842 -51580040 + AluSg SINE Alu 1 294 -16 556 247 263 28 chr20 20574522 20574971 -51578911 + LTR50 LTR ERVL 25 670 -125 263 296 56 0 chr20 20575053 20575161 -51578721 - MIR SINE MIR -72 190 77 2787 238 59 1 chr20 20575237 20575908 -51577974 - L1MC4 LINE L1 -17 6149 5449 533 180 33 40 chr20 20576045 20576195 -51577687 + MIR SINE MIR 114 262 0 2228 93 34 0 chr20 20576318 20576609 -51577273 - AluSp SINE Alu -12 301 1 1980 171 57 50 chr20 20577365 20577592 -51576290 + MLT1C LTR MaLR 8 232 -235 2107 128 7 0 chr20 20577592 20577890 -51575992 - AluSx SINE Alu -12 300 1 1980 171 57 50 chr20 20577890 20578119 -51575763 + MLT1C LTR MaLR 232 467 0 511 236 16 8 chr20 20578154 20578281 -51575601 - MIR SINE MIR -46 216 89 1337 195 0 0 chr20 20578380 20578601 -51575281 - AluJb SINE Alu -91 221 1 380 230 0 0 chr20 20578681 20578755 -51575127 - L1ME3 LINE L1 -24 6138 6065 2368 75 0 16 chr20 20578838 20579144 -51574738 - AluY SINE Alu -10 301 1 2454 43 0 0 chr20 20579342 20579649 -51574233 - AluY SINE Alu 0 307 1 200 280 0 0 chr20 20579665 20579715 -51574167 + (CA)n Simple_repeat Simple_repeat 1 50 0 5003 139 22 1 chr20 20581275 20582042 -51571840 - LTR39 LTR ERV1 0 783 1 536 302 115 13 chr20 20582076 20582311 -51571571 + LTR16C LTR ERVL 96 354 -137 585 234 31 63 chr20 20582563 20582849 -51571033 - MER34 LTR ERV1 -5 537 261 811 161 0 15 chr20 20582883 20583013 -51570869 - FLAM_C SINE Alu -13 130 3 630 207 88 101 chr20 20583017 20583308 -51570574 - MER34 LTR ERV1 -276 309 1 612 62 0 0 chr20 20583620 20583701 -51570181 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 422 252 102 14 chr20 20583727 20583874 -51570008 - MLT1L LTR MaLR -22 593 434 2150 101 0 7 chr20 20585590 20585877 -51568005 + AluSx SINE Alu 1 285 -27 198 0 0 0 chr20 20585884 20585906 -51567976 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1782 168 3 10 chr20 20585915 20586218 -51567664 + AluJb SINE Alu 1 301 -11 725 291 180 43 chr20 20586450 20586917 -51566965 + MLT1K LTR MaLR 18 548 -40 249 308 9 19 chr20 20586938 20587045 -51566837 + L2 LINE L2 2494 2599 -715 23 33 0 0 chr20 20587100 20587130 -51566752 + AT_rich Low_complexity Low_complexity 1 30 0 1830 244 17 15 chr20 20587139 20587614 -51566268 - L1MC4a LINE L1 -11 7797 7322 625 277 64 10 chr20 20587619 20587821 -51566061 - MER58C DNA MER1_type 0 215 3 1756 206 26 70 chr20 20587929 20587972 -51565910 - MLT2D LTR ERVL 0 515 472 243 61 0 0 chr20 20587972 20588005 -51565877 + (TG)n Simple_repeat Simple_repeat 2 34 0 1756 206 26 70 chr20 20588005 20588394 -51565488 - MLT2D LTR ERVL -43 472 3 287 321 19 77 chr20 20588396 20588498 -51565384 + L2 LINE L2 2780 2865 -449 981 203 11 0 chr20 20588498 20588685 -51565197 - MER5A DNA MER1_type 0 189 1 287 321 19 77 chr20 20588685 20588791 -51565091 + L2 LINE L2 2865 2976 -338 592 261 128 6 chr20 20588813 20588841 -51565041 + MER63A DNA MER1_type 9 32 -1656 207 0 0 0 chr20 20588841 20588864 -51565018 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 592 261 128 6 chr20 20588864 20589015 -51564867 + MER63A DNA MER1_type 32 210 0 397 217 237 28 chr20 20589028 20589281 -51564601 + L2 LINE L2 3008 3313 0 218 327 9 65 chr20 20589289 20589396 -51564486 + L2 LINE L2 3122 3222 -50 343 194 0 65 chr20 20589414 20589501 -51564381 - FLAM_A SINE Alu -6 127 65 276 191 48 0 chr20 20589681 20589744 -51564138 + LTR16C LTR ERVL 426 491 0 488 281 105 22 chr20 20590955 20591183 -51562699 + MIR SINE MIR 4 250 -12 938 100 0 29 chr20 20591263 20591403 -51562479 - AluSg/x SINE Alu -3 307 172 464 159 0 0 chr20 20591403 20591472 -51562410 - AluS SINE Alu -242 70 2 2183 141 0 0 chr20 20591880 20592186 -51561696 + AluSx SINE Alu 1 306 -6 1313 154 62 41 chr20 20592345 20592475 -51561407 - MER33 DNA MER1_type -2261 324 198 1813 177 0 7 chr20 20592475 20592785 -51561097 - AluJo SINE Alu -4 308 1 1313 154 62 41 chr20 20592785 20592977 -51560905 - MER33 DNA MER1_type -2387 198 1 831 143 0 0 chr20 20593240 20593359 -51560523 - FLAM_C SINE Alu -20 123 5 28 22 0 22 chr20 20593366 20593394 -51560488 + AT_rich Low_complexity Low_complexity 1 29 -16 2227 107 3 0 chr20 20593394 20593684 -51560198 - AluSx SINE Alu -21 291 1 28 22 0 22 chr20 20593684 20593701 -51560181 + AT_rich Low_complexity Low_complexity 29 45 0 569 304 50 6 chr20 20594530 20594691 -51559191 - MER91A DNA MER1_type -27 169 2 2010 141 7 3 chr20 20594878 20595176 -51558706 - AluSx SINE Alu -13 299 1 802 285 94 40 chr20 20596058 20596336 -51557546 + LTR16C LTR ERVL 1 309 -182 725 188 50 17 chr20 20596336 20596517 -51557365 - MER53 DNA DNA -1 188 2 802 285 94 40 chr20 20596517 20596642 -51557240 + LTR16C LTR ERVL 309 426 -65 903 229 79 55 chr20 20596643 20596935 -51556947 - LTR16A1 LTR ERVL -3 454 156 184 245 0 20 chr20 20597140 20597189 -51556693 + L2 LINE L2 3262 3309 -4 1876 265 43 24 chr20 20598305 20598889 -51554993 + L1ME3A LINE L1 5555 6149 -21 2359 105 0 19 chr20 20598891 20599206 -51554676 - AluSc SINE Alu 0 309 1 2664 92 14 0 chr20 20599211 20599570 -51554312 - L1PA10 LINE L1 -9 6159 5796 11387 127 2 3 chr20 20599570 20601294 -51552588 - L1PA10 LINE L1 -1073 5073 3353 1914 159 0 17 chr20 20601484 20601785 -51552097 - AluJo SINE Alu -16 296 1 806 219 156 92 chr20 20601889 20602339 -51551543 - MER66A LTR ERV1 -10 599 99 618 212 0 0 chr20 20602493 20602606 -51551276 - FLAM_A SINE Alu -17 125 13 2024 141 13 13 chr20 20602635 20602947 -51550935 + AluSx SINE Alu 1 312 0 32 0 0 0 chr20 20603110 20603142 -51550740 + AT_rich Low_complexity Low_complexity 1 32 0 1667 158 4 8 chr20 20603149 20603409 -51550473 - AluSx SINE Alu -36 276 18 1864 206 40 88 chr20 20605095 20605252 -51548630 - MER34 LTR ERV1 0 542 379 410 160 28 57 chr20 20605252 20605358 -51548524 + L1PA12 LINE L1 6066 6168 0 1864 206 40 88 chr20 20605358 20605769 -51548113 - MER34 LTR ERV1 -163 379 1 181 292 21 0 chr20 20605915 20605963 -51547919 - L2 LINE L2 -66 3247 3199 418 58 0 0 chr20 20606013 20606065 -51547817 - Alu SINE Alu -260 53 2 414 234 37 0 chr20 20606065 20606172 -51547710 - L1MC4 LINE L1 -149 7893 7783 228 315 70 37 chr20 20606172 20606413 -51547469 - L2 LINE L2 -171 3101 2853 181 349 70 0 chr20 20606467 20606596 -51547286 - L2 LINE L2 -2198 1116 979 919 255 109 39 chr20 20607014 20607134 -51546748 - L1MC4 LINE L1 -5 8037 7927 1735 139 94 0 chr20 20607134 20607401 -51546481 - AluSx SINE Alu -20 292 1 919 255 109 39 chr20 20607401 20607692 -51546190 - L1MC4 LINE L1 -115 7927 7597 2360 96 0 3 chr20 20607893 20608196 -51545686 - AluSq SINE Alu -11 302 1 27 29 0 0 chr20 20608476 20608510 -51545372 + AT_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr20 20608551 20608572 -51545310 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 21 57 0 0 chr20 20608925 20608960 -51544922 + AT_rich Low_complexity Low_complexity 1 35 0 2231 30 0 19 chr20 20609147 20609412 -51544470 - AluY SINE Alu -51 260 1 1850 133 47 4 chr20 20609548 20609827 -51544055 + AluSx SINE Alu 6 296 -16 2392 87 6 0 chr20 20612461 20612772 -51541110 - AluSp SINE Alu 0 313 1 865 40 0 0 chr20 20612787 20612888 -51540994 - HY3 scRNA scRNA 0 101 1 2198 141 0 0 chr20 20613100 20613406 -51540476 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr20 20613482 20613503 -51540379 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 20613578 20613599 -51540283 + AT_rich Low_complexity Low_complexity 1 21 0 402 57 0 0 chr20 20613769 20613822 -51540060 + (CA)n Simple_repeat Simple_repeat 1 53 0 282 276 89 48 chr20 20613947 20614262 -51539620 + HAL1 LINE L1 1110 1437 -1070 738 267 53 9 chr20 20614413 20614701 -51539181 + MLT1H1 LTR MaLR 1 312 -278 2526 83 0 10 chr20 20614871 20615183 -51538699 - AluSq SINE Alu -4 309 1 405 58 0 0 chr20 20615209 20615261 -51538621 + (TA)n Simple_repeat Simple_repeat 2 53 0 1955 239 107 2 chr20 20615534 20616012 -51537870 + MER74A LTR ERVL 1 528 -30 1995 211 147 30 chr20 20616176 20616707 -51537175 + MLT1G1 LTR MaLR 1 593 -2 288 184 69 58 chr20 20616823 20616910 -51536972 - MER5B DNA MER1_type -69 109 22 292 214 22 45 chr20 20616932 20617021 -51536861 + MER5B DNA MER1_type 92 178 0 460 188 21 0 chr20 20617113 20617209 -51536673 - MER5A DNA MER1_type -83 106 9 334 213 107 13 chr20 20617833 20617908 -51535974 + MER58C DNA MER1_type 7 88 -127 369 271 39 23 chr20 20617967 20618096 -51535786 + MER58C DNA MER1_type 85 215 0 1831 144 17 114 chr20 20618237 20618641 -51535241 + MLT1A1 LTR MaLR 1 365 0 787 268 116 33 chr20 20618942 20619304 -51534578 - MLT1J2 LTR MaLR 0 450 59 1031 246 43 7 chr20 20619304 20619609 -51534273 + L1ME3A LINE L1 5850 6165 -5 2127 204 53 92 chr20 20620385 20621258 -51532624 + L1MC5 LINE L1 7091 7929 -32 665 248 75 91 chr20 20621266 20621705 -51532177 + HsTC2 DNA Tc2 1291 1898 0 280 309 198 0 chr20 20622138 20622264 -51531618 - MIR3 SINE MIR -24 184 34 663 200 44 19 chr20 20622299 20622459 -51531423 - LTR16A1 LTR ERVL -12 445 282 625 167 19 9 chr20 20622508 20622616 -51531266 + MLT1B LTR MaLR 1 109 -281 1759 166 16 95 chr20 20622886 20623108 -51530774 + MLT1B LTR MaLR 1 176 -214 1943 153 3 7 chr20 20623108 20623428 -51530454 + AluSx SINE Alu 1 312 0 1759 166 16 95 chr20 20623428 20623628 -51530254 + MLT1B LTR MaLR 176 390 0 243 250 12 38 chr20 20623637 20623717 -51530165 - LTR16A1 LTR ERVL -332 125 48 1591 170 83 7 chr20 20624168 20624457 -51529425 - AluJo SINE Alu -1 311 1 489 263 13 19 chr20 20624972 20625128 -51528754 + MER69A DNA AcHobo 21 175 -2 1031 169 29 124 chr20 20625405 20625487 -51528395 + MER20 DNA MER1_type 1 89 -130 1515 191 21 17 chr20 20625487 20625775 -51528107 - AluJo SINE Alu -23 289 1 1031 169 29 124 chr20 20625775 20625934 -51527948 + MER20 DNA MER1_type 89 219 0 473 289 7 40 chr20 20626015 20626164 -51527718 + MIR SINE MIR 119 262 0 194 279 15 44 chr20 20626598 20626666 -51527216 + MIR3 SINE MIR 105 170 -38 251 200 20 0 chr20 20627695 20627745 -51526137 - MER115 DNA AcHobo -2 691 641 1199 322 60 6 chr20 20627796 20628162 -51525720 - MER115 DNA AcHobo -307 386 1 356 303 130 23 chr20 20628211 20628278 -51525604 - L1MC4a LINE L1 -329 5792 5734 2730 184 7 41 chr20 20628278 20628816 -51525066 + MLT2B1 LTR ERVL 1 520 0 356 303 130 23 chr20 20628816 20629014 -51524868 - L1MC4a LINE L1 -387 5734 5571 * 413 262 104 43 chr20 20629005 20629245 -51524637 + L1MC/D LINE L1 5365 5610 -556 375 188 141 8 chr20 20630924 20631052 -51522830 - L1MC5 LINE L1 -916 7045 6901 2166 128 0 0 chr20 20631076 20631374 -51522508 - AluSx SINE Alu -14 298 1 939 165 51 0 chr20 20631408 20631566 -51522316 - AluJb SINE Alu -15 297 132 211 178 44 22 chr20 20631860 20631905 -51521977 - L2 LINE L2 -18 3295 3250 215 322 85 0 chr20 20632649 20632708 -51521174 + MIR SINE MIR 34 97 -165 1297 267 48 36 chr20 20632709 20632801 -51521081 - LTR16C LTR ERVL 0 491 402 2408 93 3 0 chr20 20632801 20633103 -51520779 + AluSg SINE Alu 1 303 -7 1297 267 48 36 chr20 20633103 20633426 -51520456 - LTR16C LTR ERVL -89 402 71 291 306 41 0 chr20 20633475 20633573 -51520309 + MIR SINE MIR 96 197 -65 1051 287 32 36 chr20 20634539 20634950 -51518932 - MLT1I LTR MaLR 0 409 1 751 217 22 56 chr20 20635077 20635257 -51518625 + MER3 DNA MER1_type 1 127 -82 321 303 8 82 chr20 20635372 20635605 -51518277 - MIR SINE MIR -46 216 4 540 254 18 0 chr20 20635898 20636008 -51517874 + MER81 DNA DNA 1 112 -2 510 211 92 0 chr20 20637545 20637654 -51516228 + MER5B DNA MER1_type 59 177 -1 598 252 129 0 chr20 20638346 20638501 -51515381 + MIR3 SINE MIR 33 207 -1 534 216 76 87 chr20 20638501 20638765 -51515117 - Charlie4a DNA MER1_type -24 484 224 734 253 185 43 chr20 20638790 20639233 -51514649 + MER90 LTR ERV1 52 557 -18 297 186 0 34 chr20 20639234 20639293 -51514589 - Charlie4a DNA MER1_type -283 225 169 228 338 0 15 chr20 20639296 20639364 -51514518 - MIR SINE MIR -188 74 8 295 125 175 125 chr20 20639791 20639871 -51514011 + MLT1B LTR MaLR 1 84 -306 1001 156 39 49 chr20 20639889 20640094 -51513788 + MLT1B LTR MaLR 188 390 0 219 88 0 0 chr20 20640172 20640206 -51513676 + (TTG)n Simple_repeat Simple_repeat 1 34 0 719 122 24 32 chr20 20640207 20640330 -51513552 + LOR1a LTR ERV1 50 171 -326 1365 147 5 13 chr20 20640335 20640559 -51513323 + LOR1a LTR ERV1 276 497 0 1687 121 31 170 chr20 20640630 20640641 -51513241 - MER63B DNA MER1_type -669 393 382 803 195 0 0 chr20 20640641 20640759 -51513123 - FLAM_C SINE Alu -15 118 1 1687 121 31 170 chr20 20640759 20640860 -51513022 - MER63B DNA MER1_type -680 382 269 2245 117 0 0 chr20 20640860 20641151 -51512731 + AluSg SINE Alu 6 296 -14 1687 121 31 170 chr20 20641151 20641484 -51512398 - MER63B DNA MER1_type -793 269 9 629 216 65 13 chr20 20642429 20642582 -51511300 - MER5B DNA MER1_type -11 167 7 588 150 235 39 chr20 20642593 20642746 -51511136 + MER5A DNA MER1_type 4 186 -3 202 267 47 58 chr20 20643690 20643776 -51510106 - MIR SINE MIR 0 262 178 2121 104 21 7 chr20 20643790 20644079 -51509803 - AluSx SINE Alu -19 293 1 230 323 61 10 chr20 20644139 20644238 -51509644 - L1ME3A LINE L1 -67 6103 6000 2838 167 16 14 chr20 20644284 20644787 -51509095 - L1MB3 LINE L1 -1 6182 5679 2289 113 0 0 chr20 20644905 20645205 -51508677 - AluSg SINE Alu -10 300 1 232 274 83 0 chr20 20645214 20645298 -51508584 - MIR SINE MIR -54 208 118 699 319 74 53 chr20 20645849 20646284 -51507598 - L2 LINE L2 -1 3312 2869 1831 124 54 7 chr20 20646427 20646725 -51507157 + AluSx SINE Alu 1 312 0 2374 111 47 39 chr20 20647056 20647417 -51506465 + THE1B LTR MaLR 1 364 0 12140 82 8 2 chr20 20647417 20648977 -51504905 + THE1B-int LTR MaLR 1 1569 -11 2164 124 48 37 chr20 20648986 20649341 -51504541 + THE1B LTR MaLR 1 359 -5 2255 73 43 7 chr20 20649343 20649643 -51504239 + AluY SINE Alu 1 311 0 228 258 30 0 chr20 20649718 20649784 -51504098 + L1MC4a LINE L1 7358 7425 -383 520 220 9 0 chr20 20649802 20649911 -51503971 + L1MC4 LINE L1 7547 7656 -386 1995 133 174 16 chr20 20650292 20650660 -51503222 + MSTB1 LTR MaLR 3 428 -4 426 241 108 54 chr20 20651423 20651589 -51502293 - MLT1H LTR MaLR 0 549 375 1967 156 3 0 chr20 20651855 20652144 -51501738 - AluSx SINE Alu -18 294 5 256 318 111 8 chr20 20652285 20652411 -51501471 + MIR3 SINE MIR 38 176 -32 2052 171 18 38 chr20 20655185 20655578 -51498304 + MLT1B LTR MaLR 1 385 -5 200 320 117 10 chr20 20655705 20655808 -51498074 + MIR SINE MIR 121 234 -28 2223 206 44 59 chr20 20657613 20658179 -51495703 - L1ME3A LINE L1 -5 6165 5609 2195 126 7 0 chr20 20658179 20658481 -51495401 - AluSq SINE Alu -9 304 1 2223 206 44 59 chr20 20658481 20658556 -51495326 - L1ME3A LINE L1 -561 5609 5534 494 262 174 88 chr20 20659503 20659703 -51494179 + MLT1J LTR MaLR 3 184 -327 1822 131 57 34 chr20 20659703 20660000 -51493882 + AluJo SINE Alu 1 304 -8 494 262 174 88 chr20 20660000 20660265 -51493617 + MLT1J LTR MaLR 184 508 -3 802 306 84 51 chr20 20660655 20661123 -51492759 + MLT1G1 LTR MaLR 6 498 -97 1904 164 6 3 chr20 20661123 20661434 -51492448 + AluJb SINE Alu 1 312 0 802 306 84 51 chr20 20661434 20661536 -51492346 + MLT1G1 LTR MaLR 498 595 0 571 331 102 16 chr20 20661561 20661875 -51492007 - L3 LINE CR1 -34 1543 1203 21 0 0 0 chr20 20662556 20662577 -51491305 + AT_rich Low_complexity Low_complexity 1 21 0 2978 70 0 3 chr20 20662617 20662974 -51490908 - L1PA8 LINE L1 -11 6161 5806 391 261 50 36 chr20 20663344 20663495 -51490387 - MIR3 SINE MIR -18 190 39 473 186 35 62 chr20 20663545 20663658 -51490224 - MER63 DNA MER1_type -100 736 1 760 294 128 69 chr20 20663775 20663994 -51489888 + L2 LINE L2 2262 2466 -848 1925 216 73 9 chr20 20663994 20664433 -51489449 + MLT1C LTR MaLR 1 467 0 760 294 128 69 chr20 20664433 20664883 -51488999 + L2 LINE L2 2466 2971 -343 1133 276 33 31 chr20 20664960 20665470 -51488412 + MLT1H1 LTR MaLR 22 590 0 410 333 0 0 chr20 20665534 20665630 -51488252 + L2 LINE L2 3160 3255 -17 2162 113 13 16 chr20 20666781 20667091 -51486791 - AluSx SINE Alu -3 309 1 873 249 97 56 chr20 20667123 20667222 -51486660 - MLT1I LTR MaLR 0 409 315 441 0 0 0 chr20 20667222 20667271 -51486611 + (TG)n Simple_repeat Simple_repeat 2 50 0 873 249 97 56 chr20 20667271 20667564 -51486318 - MLT1I LTR MaLR -94 315 1 1520 173 0 116 chr20 20667830 20668183 -51485699 - AluJo SINE Alu 0 312 1 2314 107 7 0 chr20 20668192 20668500 -51485382 - AluSg SINE Alu 0 310 1 360 203 14 0 chr20 20668539 20668608 -51485274 + MER5A DNA MER1_type 9 78 -111 817 209 0 0 chr20 20670696 20670825 -51483057 - FLAM_C SINE Alu -4 129 1 296 336 64 0 chr20 20670944 20671054 -51482828 - L2 LINE L2 -2 3311 3195 623 203 39 13 chr20 20671173 20671326 -51482556 - MIR SINE MIR -6 256 100 274 233 17 0 chr20 20672988 20673048 -51480834 + MIR SINE MIR 50 110 -152 543 257 101 22 chr20 20673109 20673288 -51480594 - MIR SINE MIR -68 194 2 543 289 80 8 chr20 20673517 20673756 -51480126 + MER113 DNA MER1_type? 164 419 -102 25 0 0 0 chr20 20674174 20674199 -51479683 + AT_rich Low_complexity Low_complexity 1 25 0 320 323 139 13 chr20 20674979 20675137 -51478745 - L2 LINE L2 -568 2746 2569 222 345 23 0 chr20 20675235 20675322 -51478560 + MIR3 SINE MIR 7 95 -113 522 270 122 25 chr20 20675371 20675567 -51478315 - MER58C DNA MER1_type 0 215 1 250 271 95 47 chr20 20675568 20675679 -51478203 - MIR SINE MIR -54 154 38 587 186 17 34 chr20 20675711 20675829 -51478053 - MER58B DNA MER1_type -4 337 222 952 229 85 0 chr20 20676733 20676934 -51476948 - MER20 DNA MER1_type -1 218 1 395 282 19 0 chr20 20677660 20677763 -51476119 + MER5A DNA MER1_type 1 105 -84 1392 210 138 13 chr20 20678192 20678577 -51475305 + L1ME1 LINE L1 5693 6125 -41 2449 81 0 10 chr20 20679900 20680209 -51473673 + AluY SINE Alu 1 306 -5 2210 102 0 16 chr20 20680306 20680609 -51473273 + AluSq SINE Alu 6 303 -10 596 171 193 11 chr20 20684164 20684345 -51469537 - HsTC2 DNA Tc2 -110 1788 1575 317 217 96 52 chr20 20684405 20684520 -51469362 - MER5C DNA MER1_type -200 124 5 924 228 58 17 chr20 20684652 20684893 -51468989 - L1ME1 LINE L1 -1 6165 5915 344 231 121 0 chr20 20684919 20685010 -51468872 - L1ME1 LINE L1 -406 5760 5659 816 227 273 27 chr20 20685034 20685259 -51468623 - L1MC4 LINE L1 -4 8038 7870 1413 201 58 0 chr20 20685259 20685533 -51468349 + AluJb SINE Alu 1 290 -22 816 227 273 27 chr20 20685533 20685681 -51468201 - L1MC4 LINE L1 -172 7870 7573 331 242 121 55 chr20 20685703 20685868 -51468014 - L1MC4 LINE L1 -1402 6640 6465 714 204 45 57 chr20 20686062 20686238 -51467644 + MER5B DNA MER1_type 2 175 -3 1457 161 74 97 chr20 20686354 20686745 -51467137 - MER66A LTR ERV1 0 478 97 363 274 233 7 chr20 20687048 20687194 -51466688 - MER5A DNA MER1_type 0 189 11 312 27 0 0 chr20 20687308 20687345 -51466537 + (CA)n Simple_repeat Simple_repeat 1 37 0 560 323 162 28 chr20 20687375 20687844 -51466038 - L2 LINE L2 -3 3310 2782 2214 121 0 0 chr20 20688748 20689053 -51464829 + AluSx SINE Alu 1 305 -7 199 227 45 0 chr20 20689087 20689131 -51464751 + MIR SINE MIR 113 158 -104 330 151 0 0 chr20 20689179 20689252 -51464630 + (CA)n Simple_repeat Simple_repeat 1 73 0 453 268 71 24 chr20 20689610 20689737 -51464145 + L2 LINE L2 3180 3312 -1 1079 111 132 0 chr20 20692410 20692549 -51461333 - L1MA9 LINE L1 0 6312 6140 234 0 0 0 chr20 20692549 20692575 -51461307 + (TG)n Simple_repeat Simple_repeat 1 26 0 1079 111 132 0 chr20 20692575 20692625 -51461257 - L1MA9 LINE L1 -172 6140 6098 339 227 173 53 chr20 20694992 20695142 -51458740 + MER5A DNA MER1_type 22 189 0 2339 151 3 0 chr20 20696225 20696580 -51457302 + LTR45 LTR ERV1 1 356 -169 2166 166 36 34 chr20 20696580 20697129 -51456753 + MLT2A2 LTR ERVL 1 554 0 9360 186 6 11 chr20 20697130 20698785 -51455097 - MSTB-int LTR MaLR -5 1646 1 2819 150 7 9 chr20 20698785 20699212 -51454670 - MSTB LTR MaLR 0 426 1 295 77 0 0 chr20 20699248 20699287 -51454595 + MSTB LTR MaLR 1 39 -387 2476 118 18 54 chr20 20699566 20699955 -51453927 - THE1C LTR MaLR 0 375 1 273 313 66 56 chr20 20700197 20700395 -51453487 + MIR SINE MIR 56 255 -7 541 290 29 58 chr20 20702937 20703213 -51450669 - LTR16A1 LTR ERVL 0 457 190 932 171 55 6 chr20 20704238 20704419 -51449463 + MER20 DNA MER1_type 29 218 -1 1366 266 22 25 chr20 20706034 20706437 -51447445 + LTR16C LTR ERVL 89 490 -1 2415 183 21 7 chr20 20706603 20707029 -51446853 + MSTB1 LTR MaLR 1 432 0 634 234 226 69 chr20 20709575 20710036 -51443846 + MLT1G1 LTR MaLR 1 589 -6 379 228 18 44 chr20 20710337 20710451 -51443431 + MLT1J LTR MaLR 3 113 -398 994 322 10 3 chr20 20710616 20710914 -51442968 + LTR16C LTR ERVL 192 491 0 727 253 46 76 chr20 20711059 20711296 -51442586 + MIR SINE MIR 7 236 -26 1869 151 78 71 chr20 20711296 20711720 -51442162 - MSTB1 LTR MaLR -5 427 1 420 312 111 5 chr20 20712645 20712834 -51441048 - MIR SINE MIR -48 214 6 4256 192 54 18 chr20 20713007 20714412 -51439470 - L1MB7 LINE L1 -22 6162 4682 2136 135 0 0 chr20 20714412 20714716 -51439166 - AluY SINE Alu -7 304 1 4256 192 54 18 chr20 20714716 20715138 -51438744 - L1MB7 LINE L1 -1502 4682 4276 2470 191 17 7 chr20 20715139 20715557 -51438325 + MSTB LTR MaLR 5 426 0 5554 201 10 66 chr20 20715557 20716543 -51437339 + MSTB-int LTR MaLR 1 1040 -540 1819 170 6 26 chr20 20716543 20716854 -51437028 + AluSx SINE Alu 1 305 -7 5554 201 10 66 chr20 20716854 20716931 -51436951 + MSTB-int LTR MaLR 1040 1120 -460 1023 82 11 28 chr20 20716931 20717113 -51436769 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5554 201 10 66 chr20 20717113 20717815 -51436067 + MSTB-int LTR MaLR 1120 1580 0 2610 166 39 5 chr20 20717816 20718227 -51435655 + MSTB LTR MaLR 2 426 0 1511 190 12 39 chr20 20718228 20718560 -51435322 - L1MB7 LINE L1 -1866 4280 3958 1098 303 74 31 chr20 20718627 20719239 -51434643 + L2 LINE L2 2671 3310 -3 988 208 6 0 chr20 20719246 20719419 -51434463 + MER63A DNA MER1_type 1 174 -36 401 329 26 0 chr20 20719443 20719598 -51434284 + MER117 DNA MER1_type 1 159 -38 248 269 77 26 chr20 20720504 20720582 -51433300 - L2 LINE L2 -6 3266 3185 1253 237 32 0 chr20 20720589 20720927 -51432955 - LTR37A LTR ERV1 0 426 78 963 259 100 75 chr20 20721044 20721370 -51432512 - L2 LINE L2 -1283 2031 1686 7680 26 0 2 chr20 20721370 20722601 -51431281 - L1PA5 LINE L1 -5 6149 4921 963 259 100 75 chr20 20722601 20722784 -51431098 - L2 LINE L2 -1628 1686 1509 871 224 5 10 chr20 20722949 20723154 -51430728 - MER3 DNA MER1_type 0 209 6 22 0 0 0 chr20 20723724 20723746 -51430136 + AT_rich Low_complexity Low_complexity 1 22 0 2160 159 3 3 chr20 20723812 20724184 -51429698 - L1PA15 LINE L1 -333 6548 6177 1946 138 0 0 chr20 20724184 20724459 -51429423 + AluSx SINE Alu 1 275 -37 8399 223 22 54 chr20 20724459 20728033 -51425849 - L1PA15 LINE L1 -1984 4878 1418 370 311 31 12 chr20 20728560 20728721 -51425161 + HAL1b LINE L1 746 909 -439 21 71 0 0 chr20 20728806 20728848 -51425034 + AT_rich Low_complexity Low_complexity 1 42 0 33 35 0 17 chr20 20728939 20728964 -51424918 + AT_rich Low_complexity Low_complexity 1 25 -32 1932 155 3 0 chr20 20728964 20729248 -51424634 - AluSx SINE Alu -27 285 1 33 35 0 17 chr20 20729248 20729280 -51424602 + AT_rich Low_complexity Low_complexity 25 57 0 523 29 0 0 chr20 20729280 20729349 -51424533 - L1MA1 LINE L1 0 6302 6234 21 36 0 0 chr20 20729362 20729390 -51424492 + AT_rich Low_complexity Low_complexity 1 28 0 4108 92 3 2 chr20 20729390 20729968 -51423914 - L1PB1 LINE L1 -1 6150 5572 37975 79 4 3 chr20 20729985 20736131 -51417751 - L1PA6 LINE L1 0 6154 1 3542 220 68 3 chr20 20736135 20737075 -51416807 - L1PA15 LINE L1 -5857 1006 6 500 128 0 0 chr20 20737090 20737168 -51416714 - AluS SINE Alu -13 297 220 293 298 121 44 chr20 20737171 20737419 -51416463 + L1MEd LINE L1 94 360 -5759 321 319 17 35 chr20 20737460 20737576 -51416306 + L1MEd LINE L1 934 1047 -5072 878 186 0 53 chr20 20737826 20738014 -51415868 - Tigger2a DNA MER2_type -256 178 1 522 239 35 0 chr20 20738854 20738996 -51414886 - L1MA10 LINE L1 -4 6330 6184 30 0 0 0 chr20 20739042 20739072 -51414810 + AT_rich Low_complexity Low_complexity 1 30 0 5975 103 44 0 chr20 20739172 20740247 -51413635 - L1PA12 LINE L1 -13 6155 5050 3155 153 6 30 chr20 20740247 20740881 -51413001 + L1P LINE L1 4238 4856 -1290 3626 224 78 16 chr20 20742764 20743218 -51410664 + Charlie1 DNA MER1_type 1580 2004 -757 2363 45 24 0 chr20 20743218 20743382 -51410500 - AluY SINE Alu -16 295 120 459 0 0 0 chr20 20743382 20743433 -51410449 + (TG)n Simple_repeat Simple_repeat 2 52 0 2363 45 24 0 chr20 20743433 20743556 -51410326 - AluY SINE Alu -191 120 1 3626 224 78 16 chr20 20743556 20744214 -51409668 + Charlie1 DNA MER1_type 2004 2761 0 23 0 0 0 chr20 20744834 20744857 -51409025 + AT_rich Low_complexity Low_complexity 1 23 0 569 262 20 7 chr20 20746102 20746251 -51407631 + MER5B DNA MER1_type 26 176 -2 1819 162 7 0 chr20 20746415 20746699 -51407183 + AluJo SINE Alu 1 286 -26 211 165 72 10 chr20 20746699 20746796 -51407086 + (TA)n Simple_repeat Simple_repeat 2 104 0 240 324 0 0 chr20 20747405 20747479 -51406403 + L2 LINE L2 3193 3266 -6 826 204 80 4 chr20 20747771 20747996 -51405886 - Charlie4 DNA MER1_type -1702 259 18 333 140 0 0 chr20 20748097 20748154 -51405728 + (TTCC)n Simple_repeat Simple_repeat 4 60 0 784 195 81 0 chr20 20748245 20748419 -51405463 - MER5A DNA MER1_type 0 189 2 2728 164 68 51 chr20 20748665 20748847 -51405035 + LTR26 LTR ERV1 1 178 -425 1965 75 12 0 chr20 20748847 20749102 -51404780 + AluY SINE Alu 2 259 -52 2728 164 68 51 chr20 20749102 20749512 -51404370 + LTR26 LTR ERV1 178 603 0 373 281 16 36 chr20 20749702 20749894 -51403988 + LTR16C LTR ERVL 302 489 -2 357 315 59 35 chr20 20749896 20750099 -51403783 + MIR SINE MIR 49 256 -6 390 21 0 0 chr20 20753849 20753896 -51399986 + (TG)n Simple_repeat Simple_repeat 2 48 0 1915 136 50 39 chr20 20753907 20754267 -51399615 + THE1B LTR MaLR 1 364 0 238 336 25 33 chr20 20754416 20754538 -51399344 + L3 LINE CR1 1269 1389 -188 290 394 46 17 chr20 20754788 20754963 -51398919 + L3 LINE CR1 1393 1572 -5 369 288 88 40 chr20 20756460 20756710 -51397172 - L1ME4a LINE L1 -175 5946 5685 184 323 43 65 chr20 20757833 20757926 -51395956 - L2 LINE L2 -1 3312 3222 331 260 40 14 chr20 20757930 20758023 -51395859 + MIR SINE MIR 20 115 -93 4058 120 35 60 chr20 20758458 20759252 -51394630 - LTR1 LTR ERV1 0 785 12 463 313 27 0 chr20 20760586 20760733 -51393149 - L2 LINE L2 -1022 2292 2142 287 299 131 7 chr20 20761337 20761474 -51392408 + MIR SINE MIR 1 154 -108 1623 239 44 89 chr20 20762218 20762791 -51391091 - MLT1H1 LTR MaLR -2 553 7 294 232 0 91 chr20 20763233 20763332 -51390550 - MIR SINE MIR -102 106 17 12530 204 40 14 chr20 20763593 20768277 -51385605 + L1PA15-16 LINE L1 1222 6042 -807 279 130 136 0 chr20 20768286 20768352 -51385530 + L1PA16 LINE L1 5293 5367 -788 * 3820 100 0 7 chr20 20768345 20768923 -51384959 - L1P LINE L1 -1233 4913 4340 1480 98 4 27 chr20 20768923 20769145 -51384737 + L1PA8 LINE L1 5952 6171 -1 4487 119 59 7 chr20 20769166 20769933 -51383949 + L1PA16 LINE L1 5360 6166 0 2807 208 21 82 chr20 20769998 20770932 -51382950 - MER97a DNA MER1_type? 0 894 18 463 271 117 76 chr20 20771558 20771874 -51382008 + L2 LINE L2 2352 2700 -614 1487 203 0 32 chr20 20771874 20772185 -51381697 + AluJo SINE Alu 1 301 -11 463 271 117 76 chr20 20772185 20772396 -51381486 + L2 LINE L2 2700 2901 -413 583 206 64 7 chr20 20772424 20772565 -51381317 + L2 LINE L2 3165 3313 0 23 0 0 0 chr20 20773140 20773163 -51380719 + AT_rich Low_complexity Low_complexity 1 23 0 269 346 20 40 chr20 20774326 20774427 -51379455 + MIR SINE MIR 12 110 -152 229 253 0 40 chr20 20774646 20774721 -51379161 + L3 LINE CR1 577 648 -929 * 1643 253 90 30 chr20 20774662 20775227 -51378655 + L2 LINE L2 2107 2705 -609 1758 197 39 20 chr20 20775234 20775929 -51377953 - L1MC/D LINE L1 -743 5403 4977 * 1892 228 57 4 chr20 20775913 20776369 -51377513 + L1ME1 LINE L1 5685 6164 -2 597 157 0 100 chr20 20776374 20776514 -51377368 - L1MC1 LINE L1 -132 6201 6076 731 181 65 0 chr20 20776516 20776671 -51377211 + L1MC1 LINE L1 6169 6333 0 831 268 59 16 chr20 20776756 20777010 -51376872 + MER119 DNA MER1_type 68 332 -251 2788 143 17 38 chr20 20777015 20777206 -51376676 - LTR24 LTR ERV1 0 467 274 2269 122 0 0 chr20 20777206 20777517 -51376365 - AluSx SINE Alu -1 311 1 2788 143 17 38 chr20 20777517 20777802 -51376080 - LTR24 LTR ERV1 -193 274 1 2194 112 0 3 chr20 20777819 20778132 -51375750 - L1PB1 LINE L1 -3 6148 5837 2298 210 0 0 chr20 20778134 20778629 -51375253 + L1 LINE L1 4143 4637 -1509 463 235 9 0 chr20 20778630 20778745 -51375137 - LTR24-int LTR ERV1 0 5123 5008 419 328 91 38 chr20 20779126 20779391 -51374491 - LTR24-int LTR ERV1 -437 6685 6407 23 33 0 0 chr20 20780100 20780130 -51373752 + AT_rich Low_complexity Low_complexity 1 30 0 1860 160 0 14 chr20 20780130 20780423 -51373459 - AluJb SINE Alu -23 289 1 855 128 0 0 chr20 20780748 20780873 -51373009 - L1PB1 LINE L1 -190 5961 5837 714 187 0 0 chr20 20780870 20781004 -51372878 + L1 LINE L1 4138 4271 -1875 * 305 292 91 71 chr20 20782908 20783261 -51370621 - LTR24-int LTR ERV1 -4381 4045 3686 305 317 80 46 chr20 20783460 20783943 -51369939 - LTR24-int LTR ERV1 -4093 3897 2538 710 186 40 0 chr20 20783979 20784103 -51369779 - FLAM_C SINE Alu -12 131 3 950 97 8 0 chr20 20785121 20785255 -51368627 + MER85 DNA T2_type 1 135 -4 207 0 0 0 chr20 20785525 20785548 -51368334 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5278 128 21 2 chr20 20785549 20786371 -51367511 + L1PA16 LINE L1 5312 6148 -18 1821 183 6 3 chr20 20786647 20786958 -51366924 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 20787050 20787074 -51366808 + AT_rich Low_complexity Low_complexity 1 24 0 301 241 0 35 chr20 20787257 20787344 -51366538 - LTR24-int LTR ERV1 -4378 745 662 1465 207 47 41 chr20 20787660 20788156 -51365726 - LTR24-int LTR ERV1 -4472 651 17 2792 141 31 2 chr20 20788172 20788626 -51365256 - LTR24 LTR ERV1 0 467 1 273 284 0 12 chr20 20788735 20788816 -51365066 - LTR67 LTR ERVL -477 80 1 324 246 82 37 chr20 20788832 20788966 -51364916 + MIR SINE MIR 105 244 -18 2317 114 3 0 chr20 20789567 20789873 -51364009 - AluSq SINE Alu -6 307 1 734 310 112 17 chr20 20790876 20791414 -51362468 - L1MC4a LINE L1 -1907 5901 5313 1704 170 7 29 chr20 20791517 20791823 -51362059 - AluJo SINE Alu -13 299 1 28 111 0 0 chr20 20792356 20792482 -51361400 + AT_rich Low_complexity Low_complexity 1 126 0 801 301 89 31 chr20 20792740 20793321 -51360561 - L1MC4a LINE L1 -1807 4339 3725 463 298 94 57 chr20 20793338 20793878 -51360004 - L1MC4a LINE L1 -2503 3643 3084 279 0 0 0 chr20 20793892 20793923 -51359959 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 13797 200 24 7 chr20 20793923 20794292 -51359590 - L1PB1 LINE L1 -11 6856 6495 294 95 0 0 chr20 20794292 20794334 -51359548 + (CA)n Simple_repeat Simple_repeat 2 43 0 13797 200 24 7 chr20 20794334 20797954 -51355928 - L1PB1 LINE L1 -372 6495 2692 288 0 0 0 chr20 20797954 20797986 -51355896 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 13797 200 24 7 chr20 20797986 20798821 -51355061 - L1PB1 LINE L1 -4175 2692 1872 367 248 8 16 chr20 20798810 20798931 -51354951 - L1ME LINE L1 -297 5824 5705 * 2742 10 0 0 chr20 20798965 20799263 -51354619 - AluYa5 SINE Alu -13 298 1 391 294 25 109 chr20 20800069 20800270 -51353612 - MLT1K LTR MaLR -317 271 88 422 313 37 33 chr20 20800741 20800955 -51352927 + LTR16C LTR ERVL 275 489 -2 295 350 43 0 chr20 20801256 20801373 -51352509 - L2 LINE L2 -10 3303 3182 300 281 0 10 chr20 20801593 20801689 -51352193 + L1MC4 LINE L1 7427 7521 -521 268 263 0 0 chr20 20801691 20801705 -51352177 + MER3 DNA MER1_type 34 47 -162 423 132 132 0 chr20 20801705 20801781 -51352101 - MER3 DNA MER1_type 0 209 124 1061 187 31 8 chr20 20801781 20802038 -51351844 + L1MA7 LINE L1 6017 6279 -12 29 28 0 0 chr20 20802045 20802081 -51351801 + AT_rich Low_complexity Low_complexity 1 36 0 609 217 0 0 chr20 20802081 20802196 -51351686 + FLAM_C SINE Alu 3 117 -26 312 27 0 0 chr20 20802196 20802233 -51351649 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 569 240 40 0 chr20 20802233 20802358 -51351524 - MER3 DNA MER1_type -79 130 1 1118 213 166 0 chr20 20802378 20802655 -51351227 + L1MC4a LINE L1 7481 7803 -5 25 31 0 0 chr20 20802701 20802733 -51351149 + AT_rich Low_complexity Low_complexity 1 32 0 916 334 28 26 chr20 20802793 20803215 -51350667 + HERV16 LTR ERVL 61 483 -4513 1370 297 86 17 chr20 20803248 20803828 -51350054 + HERVL LTR ERVL 2711 3330 -2324 440 210 10 10 chr20 20804118 20804218 -51349664 + HERVL LTR ERVL 3764 3863 -1901 598 324 69 43 chr20 20804583 20805153 -51348729 + HERVL LTR ERVL 4525 5140 -624 3762 167 30 6 chr20 20805153 20805816 -51348066 - LTR58 LTR ERV1 0 679 1 598 324 69 43 chr20 20805816 20806013 -51347869 + HERVL LTR ERVL 5140 5330 -434 482 250 33 20 chr20 20806098 20806250 -51347632 + LTR16A LTR ERVL 196 349 -101 1429 221 206 17 chr20 20806253 20806728 -51347154 + MLT1F1 LTR MaLR 3 567 0 286 309 21 0 chr20 20806728 20806822 -51347060 + LTR16A LTR ERVL 349 444 -6 462 254 8 8 chr20 20807161 20807283 -51346599 + MIR SINE MIR 136 257 -5 795 256 141 34 chr20 20808364 20808905 -51344977 - L1MC4a LINE L1 -299 5822 5255 4714 194 9 21 chr20 20809063 20810181 -51343701 + L1MA3 LINE L1 3527 4630 -2935 6948 133 27 15 chr20 20810200 20812308 -51341574 + L1MA3 LINE L1 5586 7724 0 2639 166 44 69 chr20 20812625 20813191 -51340691 - MLT2B3 LTR ERVL -2 552 1 216 0 0 0 chr20 20813407 20813431 -51340451 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 7514 106 13 4 chr20 20813432 20815360 -51338522 - L1PA10 LINE L1 -20 6148 4204 2116 112 0 3 chr20 20815456 20815787 -51338095 - AluSp SINE Alu 0 330 1 225 148 0 98 chr20 20815993 20816054 -51337828 + L1ME2 LINE L1 5972 6026 -138 225 0 0 0 chr20 20816118 20816143 -51337739 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 203 231 0 0 chr20 20816192 20816231 -51337651 + (CA)n Simple_repeat Simple_repeat 2 40 0 289 237 0 17 chr20 20816231 20816290 -51337592 + Tigger5 DNA MER2_type 1 58 -2265 * 1762 131 25 0 chr20 20816274 20816556 -51337326 + Tigger5 DNA MER2_type 2035 2323 0 27 49 0 0 chr20 20816969 20817010 -51336872 + AT_rich Low_complexity Low_complexity 1 41 0 336 322 7 9 chr20 20817019 20817182 -51336700 + L1MC4a LINE L1 5670 5833 -297 2247 80 28 3 chr20 20817310 20817598 -51336284 - AluSg SINE Alu -15 295 1 1965 141 3 0 chr20 20817873 20818157 -51335725 - AluSx SINE Alu -25 287 3 2028 124 84 32 chr20 20819128 20819474 -51334408 + THE1B LTR MaLR 1 364 0 209 264 19 0 chr20 20819544 20819597 -51334285 + (CA)n Simple_repeat Simple_repeat 1 54 0 444 270 132 53 chr20 20819660 20820131 -51333751 - L1ME4a LINE L1 -4 6117 5610 201 161 0 0 chr20 20820180 20820211 -51333671 + L2 LINE L2 3227 3257 -15 238 291 23 12 chr20 20820211 20820297 -51333585 - L1ME4a LINE L1 -499 5622 5536 1641 122 4 35 chr20 20820351 20820605 -51333277 - AluSx SINE Alu -17 295 50 2018 123 6 35 chr20 20820612 20820930 -51332952 - THE1B LTR MaLR -55 309 1 320 216 163 64 chr20 20820937 20821219 -51332663 - L1ME4a LINE L1 -870 5276 4967 514 211 0 0 chr20 20821436 20821531 -51332351 - FLAM_A SINE Alu -13 129 35 264 314 94 31 chr20 20821630 20821821 -51332061 + MIR SINE MIR 58 260 -2 2059 150 26 58 chr20 20821886 20822313 -51331569 - MLT2D LTR ERVL -1 413 1 12050 209 46 16 chr20 20823225 20827033 -51326849 - L1 LINE L1 -1133 5715 1776 1265 183 0 0 chr20 20827033 20827235 -51326647 + AluJb SINE Alu 87 288 -24 27 29 0 0 chr20 20827235 20827269 -51326613 + AT_rich Low_complexity Low_complexity 1 34 0 4385 259 71 64 chr20 20827291 20827506 -51326376 - L1 LINE L1 -5060 1789 1577 1879 160 0 36 chr20 20827506 20827813 -51326069 - AluSx SINE Alu -16 296 1 4385 259 71 64 chr20 20827813 20829365 -51324517 - L1 LINE L1 -5272 1577 10 4086 187 96 70 chr20 20829369 20829414 -51324468 - L1MDa LINE L1 -4137 2403 2361 207 0 0 0 chr20 20829414 20829437 -51324445 + (TA)n Simple_repeat Simple_repeat 2 24 0 4086 187 96 70 chr20 20829437 20829881 -51324001 - L1MDa LINE L1 -4179 2361 1930 2133 97 7 10 chr20 20829881 20830169 -51323713 - AluSq SINE Alu -26 287 1 4086 187 96 70 chr20 20830169 20830945 -51322937 - L1MDa LINE L1 -4610 1930 1104 450 291 33 22 chr20 20831053 20831235 -51322647 + LTR16C LTR ERVL 287 470 -21 1023 165 0 96 chr20 20831549 20831779 -51322103 + L1PA13 LINE L1 3 210 -7371 * 23160 168 13 6 chr20 20831768 20836250 -51317632 + L1PA13 LINE L1 2409 6930 -671 2268 115 0 0 chr20 20836250 20836554 -51317328 + AluSx SINE Alu 3 306 -6 23160 168 13 6 chr20 20836554 20837226 -51316656 + L1PA13 LINE L1 6930 7596 -5 2504 193 47 33 chr20 20838735 20839315 -51314567 + MER92B LTR ERV1 46 633 -3 638 183 43 55 chr20 20840014 20840178 -51313704 + MER5A DNA MER1_type 14 175 -14 218 298 21 21 chr20 20840375 20840469 -51313413 - MIR SINE MIR -6 256 163 205 322 215 0 chr20 20841536 20841657 -51312225 - MIR3 SINE MIR -31 177 31 441 289 19 38 chr20 20841680 20841839 -51312043 - MER5A DNA MER1_type -22 167 12 1792 149 3 17 chr20 20842214 20842503 -51311379 + AluJb SINE Alu 1 285 -27 215 30 0 30 chr20 20842503 20842536 -51311346 + (TTTAA)n Simple_repeat Simple_repeat 1 32 0 1014 152 0 0 chr20 20842536 20842687 -51311195 + FRAM SINE Alu 1 144 -32 339 226 0 43 chr20 20843113 20843206 -51310676 + MLT1K LTR MaLR 177 265 -323 346 245 20 88 chr20 20843254 20843401 -51310481 - L2 LINE L2 -25 3288 3152 521 235 0 0 chr20 20843486 20843601 -51310281 - MIR SINE MIR -10 252 138 512 299 133 17 chr20 20844450 20844684 -51309198 + MIR SINE MIR 2 262 0 1509 182 3 47 chr20 20844790 20845115 -51308767 + AluJo SINE Alu 1 312 0 309 272 0 68 chr20 20845324 20845344 -51308538 - L1MC4 LINE L1 -1333 6709 6689 2156 80 22 0 chr20 20845344 20845640 -51308242 + AluY SINE Alu 1 302 0 309 272 0 68 chr20 20845640 20845721 -51308161 - L1MC4 LINE L1 -1353 6689 6614 * 314 326 0 0 chr20 20845647 20845736 -51308146 + L1MC4 LINE L1 6614 6702 -1340 259 328 75 22 chr20 20846427 20846561 -51307321 + MIR SINE MIR 94 234 -28 642 174 10 0 chr20 20847418 20847516 -51306366 + AluJo SINE Alu 21 119 -193 1166 142 0 0 chr20 20847527 20847696 -51306186 - AluSg/x SINE Alu -18 292 124 890 179 0 0 chr20 20847715 20847860 -51306022 + AluJo SINE Alu 129 273 -39 219 36 0 0 chr20 20847865 20847893 -51305989 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 435 38 0 0 chr20 20847892 20847945 -51305937 + (TG)n Simple_repeat Simple_repeat 2 54 0 326 270 96 34 chr20 20848463 20848641 -51305241 + MIR SINE MIR 74 262 0 893 270 201 12 chr20 20848961 20849459 -51304423 + L2 LINE L2 2715 3313 0 23 0 0 0 chr20 20849560 20849583 -51304299 + AT_rich Low_complexity Low_complexity 1 23 0 42568 63 3 1 chr20 20849583 20855723 -51298159 - L1PA5 LINE L1 -2 6152 1 493 256 33 11 chr20 20856215 20856395 -51297487 - L1MEc LINE L1 -3965 2756 2573 1587 250 56 7 chr20 20856400 20856812 -51297070 + MER70A LTR ERVL 4 435 -37 281 105 0 0 chr20 20856838 20856876 -51297006 - L1MEc LINE L1 -4001 2539 2502 3541 182 74 100 chr20 20857030 20858295 -51295587 + MER52C LTR ERV1 76 1278 0 996 239 27 0 chr20 20858427 20858649 -51295233 - MSTB LTR MaLR -197 229 2 2246 264 84 30 chr20 20858673 20859449 -51294433 - L1MEc LINE L1 -5524 1019 202 366 270 75 13 chr20 20859449 20859608 -51294274 - L1M4 LINE L1 -2905 3477 3309 235 280 15 2 chr20 20859761 20859856 -51294026 - HAL1 LINE L1 -902 1841 1541 737 217 121 13 chr20 20859904 20860134 -51293748 + MLT1G3 LTR MaLR 151 436 -106 340 285 219 0 chr20 20860159 20860282 -51293600 + MIR SINE MIR 49 198 -64 * 358 309 42 42 chr20 20860276 20860444 -51293438 - MIR SINE MIR -84 178 11 494 266 145 5 chr20 20861262 20861469 -51292413 - MIR SINE MIR -26 236 1 329 217 24 0 chr20 20861542 20861625 -51292257 + MER113 DNA MER1_type? 366 450 -71 211 345 44 9 chr20 20861860 20861973 -51291909 + MIR3 SINE MIR 65 181 -27 2233 151 30 21 chr20 20862065 20862437 -51291445 + THE1C LTR MaLR 1 375 0 916 243 146 27 chr20 20862478 20862882 -51291000 - MER113 DNA MER1_type? 0 521 70 554 282 45 0 chr20 20862893 20863049 -51290833 - MLT1H LTR MaLR -5 544 382 * 1452 260 71 4 chr20 20863013 20863463 -51290419 - Charlie4a DNA MER1_type -7 501 22 314 249 99 86 chr20 20864706 20865088 -51288794 - L1ME4a LINE L1 -3 6118 5732 302 262 110 67 chr20 20866287 20866451 -51287431 - MIR SINE MIR -4 258 88 1966 150 7 7 chr20 20867588 20867888 -51285994 - AluJo SINE Alu -12 300 1 222 342 221 0 chr20 20868455 20868604 -51285278 - MIR SINE MIR -23 239 58 757 210 5 6 chr20 20868610 20868765 -51285117 + MLT1B LTR MaLR 1 139 -251 * 891 191 62 15 chr20 20868751 20869050 -51284832 + LOR1a LTR ERV1 126 497 0 1457 179 12 0 chr20 20869050 20869301 -51284581 + MLT1B LTR MaLR 137 390 0 1306 208 96 16 chr20 20869331 20869644 -51284238 - MLT1F LTR MaLR 0 542 205 560 250 40 45 chr20 20869879 20870055 -51283827 + MIR SINE MIR 31 205 -57 728 121 0 16 chr20 20870101 20870225 -51283657 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 1205 163 51 99 chr20 20870667 20870961 -51282921 - AluJo SINE Alu -12 300 21 1943 123 54 92 chr20 20870999 20871389 -51282493 + THE1C LTR MaLR 1 375 0 1298 286 51 15 chr20 20871494 20871886 -51281996 - LTR16C LTR ERVL -1 490 85 26479 149 31 13 chr20 20872503 20878305 -51275577 + L1PA8A LINE L1 1 5960 -486 1091 160 116 0 chr20 20878306 20878487 -51275395 + ERVL LTR ERVL 4573 4774 -990 498 222 11 0 chr20 20878487 20878577 -51275305 + MLT2B1 LTR ERVL 352 442 -78 24 0 0 0 chr20 20878631 20878655 -51275227 + AT_rich Low_complexity Low_complexity 1 24 0 310 188 0 0 chr20 20878670 20878726 -51275156 + MLT2C2 LTR ERVL 416 464 0 3088 102 20 13 chr20 20879591 20880042 -51273840 + L1MA3 LINE L1 5852 6305 0 528 250 14 29 chr20 20881018 20881158 -51272724 + MIR SINE MIR 60 197 -65 209 360 30 0 chr20 20881192 20881292 -51272590 + L2 LINE L2 3170 3272 0 559 313 96 54 chr20 20881501 20882323 -51271559 + L2 LINE L2 2430 3272 0 423 346 15 0 chr20 20882639 20882775 -51271107 + LTR16C LTR ERVL 114 251 -240 6128 71 0 1 chr20 20882846 20883611 -51270271 - L1PA7 LINE L1 -5 6149 5386 397 155 14 0 chr20 20883611 20883682 -51270200 + Tigger6 DNA MER2_type 1433 1504 -93 192 40 0 0 chr20 20883805 20883830 -51270052 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 387 43 14 57 chr20 20883842 20883912 -51269970 - L1PA4 LINE L1 -2 6153 6087 3813 64 11 40 chr20 20883912 20884456 -51269426 - L1P LINE L1 -768 5378 4851 3209 108 0 0 chr20 20884454 20884907 -51268975 + L1P LINE L1 4418 4870 -1276 * 419 254 15 23 chr20 20886477 20886607 -51267275 - LTR67 LTR ERVL 0 557 429 902 288 50 20 chr20 20886980 20887282 -51266600 + LTR16C LTR ERVL 181 491 0 347 342 38 41 chr20 20888870 20889209 -51264673 - MER110-int LTR ERV1 -2205 2442 2105 275 303 22 34 chr20 20889620 20889709 -51264173 + L2 LINE L2 3008 3095 -177 1365 143 9 19 chr20 20889812 20890028 -51263854 - L1MB5 LINE L1 -8 6166 5953 663 266 131 5 chr20 20890157 20890356 -51263526 + MIR SINE MIR 15 238 -24 237 314 14 0 chr20 20890640 20890710 -51263172 + L2 LINE L2 3193 3263 -50 238 356 93 0 chr20 20892085 20892203 -51261679 - MIR SINE MIR -111 151 23 1200 256 59 28 chr20 20892603 20892994 -51260888 - LTR16A1 LTR ERVL -5 452 50 1638 203 124 6 chr20 20893097 20893451 -51260431 + MSTD LTR MaLR 1 396 0 224 374 15 38 chr20 20894166 20894297 -51259585 - MIR3 SINE MIR -51 157 30 748 279 116 50 chr20 20894376 20894756 -51259126 + LTR16C LTR ERVL 87 491 0 562 244 8 0 chr20 20894826 20894957 -51258925 - MLT2F LTR ERVL 0 663 532 324 102 0 0 chr20 20895659 20895708 -51258174 + (GA)n Simple_repeat Simple_repeat 1 49 0 33 0 0 0 chr20 20895828 20895861 -51258021 + AT_rich Low_complexity Low_complexity 1 33 0 1268 220 150 37 chr20 20895881 20896362 -51257520 + MLT1H LTR MaLR 13 547 -2 205 270 160 76 chr20 20897610 20897847 -51256035 + L2 LINE L2 2922 3178 -94 304 221 53 21 chr20 20898229 20898324 -51255558 + MIR SINE MIR 121 218 -44 227 244 22 22 chr20 20898989 20899001 -51254881 + CT-rich Low_complexity Low_complexity 4 15 -78 2879 162 71 82 chr20 20899001 20899646 -51254236 + LTR8A LTR ERV1 1 639 -88 2101 130 0 13 chr20 20899646 20899946 -51253936 - AluSg SINE Alu -14 296 1 2879 162 71 82 chr20 20899946 20900035 -51253847 + LTR8A LTR ERV1 639 727 0 227 244 22 22 chr20 20900035 20900112 -51253770 + CT-rich Low_complexity Low_complexity 14 93 0 294 318 12 12 chr20 20900155 20900240 -51253642 - L2 LINE L2 -19 3253 3169 736 280 34 13 chr20 20900883 20901119 -51252763 + MIR SINE MIR 1 241 -21 267 279 153 0 chr20 20901144 20901255 -51252627 + L2 LINE L2 3137 3264 -8 851 277 21 0 chr20 20901904 20902142 -51251740 - MIR SINE MIR -8 254 12 6853 165 18 12 chr20 20902672 20903425 -51250457 + L1PA12 LINE L1 6 770 -6811 1766 176 23 13 chr20 20903425 20903732 -51250150 - AluSx SINE Alu -2 310 1 6853 165 18 12 chr20 20903732 20904103 -51249779 + L1PA12 LINE L1 770 1137 -6444 6787 193 28 39 chr20 20904113 20904781 -51249101 + L1P LINE L1 2843 3517 -2629 2358 129 33 30 chr20 20904781 20905144 -51248738 + THE1B LTR MaLR 1 364 0 6787 193 28 39 chr20 20905144 20906023 -51247859 + L1P LINE L1 3517 4372 -1774 1677 185 3 11 chr20 20906230 20906517 -51247365 + AluJo SINE Alu 3 287 -25 186 43 0 0 chr20 20906520 20906543 -51247339 + (CAA)n Simple_repeat Simple_repeat 2 24 0 306 290 110 0 chr20 20906573 20906673 -51247209 + MIR SINE MIR 134 244 -18 723 195 68 21 chr20 20908083 20908273 -51245609 - Charlie4a DNA MER1_type 0 508 310 1620 212 129 8 chr20 20908299 20908686 -51245196 - L1MD3 LINE L1 -10 7985 7552 954 220 59 28 chr20 20908749 20909035 -51244847 - Charlie4a DNA MER1_type -197 311 17 387 0 0 0 chr20 20909308 20909351 -51244531 + (TG)n Simple_repeat Simple_repeat 2 44 0 340 302 195 0 chr20 20909664 20909823 -51244059 - MIR SINE MIR -72 190 1 2235 66 45 3 chr20 20910474 20910762 -51243120 + AluY SINE Alu 1 300 -11 1325 220 75 8 chr20 20910778 20911325 -51242557 - MLT1E1 LTR MaLR -10 644 3 549 139 79 0 chr20 20911953 20912054 -51241828 + L1MA9 LINE L1 6198 6306 -6 229 256 12 105 chr20 20912720 20912806 -51241076 - L2 LINE L2 -2 3311 3234 261 258 153 0 chr20 20913182 20913306 -51240576 + L1ME4a LINE L1 5978 6120 -1 23 0 0 0 chr20 20913856 20913879 -51240003 + AT_rich Low_complexity Low_complexity 1 23 0 746 330 17 10 chr20 20914299 20914590 -51239292 - L3 LINE CR1 -67 1510 1218 997 248 51 94 chr20 20915836 20916414 -51237468 + MLT1H1 LTR MaLR 1 555 0 245 274 55 0 chr20 20916422 20916495 -51237387 - MER5C DNA MER1_type -200 124 48 1570 204 7 0 chr20 20918323 20918738 -51235144 + AluJo SINE Alu 1 417 0 486 192 92 0 chr20 20918817 20918937 -51234945 + L1ME LINE L1 5575 5705 -416 259 309 0 0 chr20 20918939 20919007 -51234875 + L2 LINE L2 3246 3313 0 324 354 15 0 chr20 20919012 20919142 -51234740 + L1ME LINE L1 5691 5822 -299 23 0 0 0 chr20 20919147 20919170 -51234712 + AT_rich Low_complexity Low_complexity 1 23 0 377 282 243 34 chr20 20919541 20919747 -51234135 - MIR SINE MIR 0 262 14 497 148 0 12 chr20 20919958 20920039 -51233843 - MADE1 DNA Mariner 0 80 1 23 0 0 0 chr20 20920490 20920513 -51233369 + AT_rich Low_complexity Low_complexity 1 23 0 2676 153 8 44 chr20 20922234 20922710 -51231172 + LTR9 LTR ERV1 1 459 -153 181 0 0 65 chr20 20924073 20924104 -51229778 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 216 0 0 0 chr20 20924205 20924229 -51229653 + (T)n Simple_repeat Simple_repeat 1 24 0 369 271 96 16 chr20 20924384 20924572 -51229310 + L1M4 LINE L1 2962 3164 -2982 521 305 90 66 chr20 20924728 20925275 -51228607 + L1M4 LINE L1 3599 4158 -1988 305 177 0 16 chr20 20925267 20925329 -51228553 - L1MC4 LINE L1 -1334 6708 6648 * 235 292 0 0 chr20 20925347 20925436 -51228446 - L1MC4 LINE L1 -1339 6703 6615 477 250 0 0 chr20 20925444 20925584 -51228298 + (TA)n Simple_repeat Simple_repeat 1 140 0 308 326 0 0 chr20 20925594 20925683 -51228199 + L1MC4 LINE L1 6615 6703 -1339 32 0 0 0 chr20 20925828 20925860 -51228022 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr20 20925894 20925924 -51227958 + AT_rich Low_complexity Low_complexity 1 30 0 304 258 91 53 chr20 20926002 20926134 -51227748 + HAL1 LINE L1 4 140 -2367 692 266 109 39 chr20 20926421 20926860 -51227022 + LTR33 LTR ERVL 48 517 -4 431 284 249 10 chr20 20927195 20927392 -51226490 + MIR SINE MIR 19 262 0 443 328 62 17 chr20 20927661 20927838 -51226044 + MIR3 SINE MIR 20 204 -4 214 381 42 17 chr20 20929443 20929561 -51224321 - L2 LINE L2 -36 3236 3116 6532 117 26 31 chr20 20930044 20931120 -51222762 - MER11C LTR ERVK 0 1071 1 689 307 4 31 chr20 20931650 20931878 -51222004 - MIR SINE MIR 0 262 41 276 100 0 0 chr20 20931907 20931947 -51221935 + (T)n Simple_repeat Simple_repeat 1 40 0 508 183 34 115 chr20 20931990 20932198 -51221684 + MER102b DNA MER1_type 151 341 0 488 268 7 65 chr20 20933754 20933796 -51220086 - MER5A DNA MER1_type 0 189 146 1953 154 9 46 chr20 20933796 20934146 -51219736 - MER1B DNA MER1_type 0 337 1 488 268 7 65 chr20 20934146 20934241 -51219641 - MER5A DNA MER1_type -43 146 60 405 0 0 0 chr20 20934287 20934332 -51219550 + (TG)n Simple_repeat Simple_repeat 1 45 0 28 29 0 0 chr20 20935540 20935575 -51218307 + AT_rich Low_complexity Low_complexity 1 35 0 402 186 158 23 chr20 20935773 20935918 -51217964 - MIR SINE MIR -54 208 50 358 322 64 18 chr20 20937246 20937439 -51216443 + MIR SINE MIR 3 201 -61 2190 23 0 0 chr20 20937833 20938096 -51215786 - L1PA5 LINE L1 -113 6041 5779 810 21 0 0 chr20 20938096 20938188 -51215694 + L1PA5 LINE L1 6053 6145 -9 236 219 0 14 chr20 20938841 20938914 -51214968 + (TGAA)n Simple_repeat Simple_repeat 1 72 0 202 300 0 0 chr20 20939348 20939398 -51214484 + MIR SINE MIR 66 115 -93 241 330 80 0 chr20 20939838 20939950 -51213932 + L2 LINE L2 3148 3268 -4 1311 223 61 9 chr20 20940469 20940814 -51213068 + L1M2 LINE L1 1 363 -6667 * 3761 183 46 63 chr20 20940812 20942285 -51211597 + L1M2 LINE L1 5058 6441 -743 252 209 202 23 chr20 20942483 20942612 -51211270 - MER103 DNA DNA -2 164 13 428 290 65 85 chr20 20942699 20942947 -51210935 + MIR SINE MIR 12 254 -8 201 372 64 0 chr20 20943845 20943939 -51209943 + MER5B DNA MER1_type 7 106 -72 1112 162 28 14 chr20 20944844 20945060 -51208822 - MER20 DNA MER1_type 0 219 1 2963 192 18 15 chr20 20945178 20945838 -51208044 - L1MB7 LINE L1 -15 6169 5508 394 343 130 0 chr20 20946604 20946817 -51207065 - MIR SINE MIR -17 245 5 458 176 141 9 chr20 20947128 20947251 -51206631 + MIR SINE MIR 13 152 -56 713 216 91 57 chr20 20947261 20947847 -51206035 - LTR48B LTR ERV1 -4 729 1 205 337 24 12 chr20 20947878 20947961 -51205921 + MIR SINE MIR 151 234 -28 612 238 24 73 chr20 20948458 20948664 -51205218 - MIR SINE MIR -1 261 66 1662 206 40 11 chr20 20948872 20949251 -51204631 + MLT1B LTR MaLR 1 390 0 600 210 45 6 chr20 20949331 20949488 -51204394 + L1MB3 LINE L1 5088 5250 -896 353 165 253 11 chr20 20949492 20949583 -51204299 + LTR7 LTR ERV1 1 113 -337 1346 114 9 9 chr20 20949585 20949805 -51204077 + LTR7 LTR ERV1 231 450 0 3582 165 58 53 chr20 20949815 20950732 -51203150 + L1MB3 LINE L1 5260 6176 -7 1445 285 53 20 chr20 20950889 20951775 -51202107 + L1ME3A LINE L1 5030 5947 -223 241 259 0 25 chr20 20952441 20952522 -51201360 + MLT1L LTR MaLR 422 500 -115 1208 288 44 15 chr20 20952813 20953268 -51200614 - MLT1J LTR MaLR -20 491 24 558 0 0 0 chr20 20953544 20953606 -51200276 + (TTTC)n Simple_repeat Simple_repeat 4 65 0 1881 157 58 32 chr20 20954211 20954751 -51199131 + MLT2A2 LTR ERVL 1 554 0 344 330 68 57 chr20 20955106 20955300 -51198582 - L1M4 LINE L1 -1200 4946 4745 2131 127 6 13 chr20 20955300 20955614 -51198268 - AluSx SINE Alu 0 312 1 344 330 68 57 chr20 20955614 20955789 -51198093 - L1M4 LINE L1 -1401 4745 4573 26 50 0 0 chr20 20955989 20956029 -51197853 + AT_rich Low_complexity Low_complexity 1 40 0 331 243 103 18 chr20 20956029 20956196 -51197686 - L1MC4 LINE L1 -143 7899 7609 1523 171 119 29 chr20 20956284 20956663 -51197219 - L1MB7 LINE L1 -38 6146 5734 239 285 47 50 chr20 20957445 20957743 -51196139 - L1M4 LINE L1 -1822 4324 4028 249 33 0 0 chr20 20958033 20958063 -51195819 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1726 170 7 0 chr20 20958063 20958339 -51195543 - AluSx SINE Alu -34 278 1 180 183 290 21 chr20 20960904 20960997 -51192885 + MER5A DNA MER1_type 41 158 -31 * 459 266 11 0 chr20 20960937 20961031 -51192851 - MER5A DNA MER1_type -86 103 9 229 299 0 39 chr20 20961447 20961524 -51192358 + G-rich Low_complexity Low_complexity 1 74 0 636 203 45 31 chr20 20961777 20962085 -51191797 - L1ME2 LINE L1 -9 6155 5770 1533 152 7 7 chr20 20962091 20962368 -51191514 + L1M3e LINE L1 1 277 -6753 268 143 20 0 chr20 20962374 20962423 -51191459 - MSTB2 LTR MaLR 0 457 408 1636 174 0 29 chr20 20962449 20962730 -51191152 + AluJo SINE Alu 1 273 -39 451 126 0 92 chr20 20962762 20962849 -51191033 - MLT1A1 LTR MaLR -171 194 116 1818 149 16 9 chr20 20962854 20963301 -51190581 + L1MA8 LINE L1 5024 5474 -749 28 0 0 0 chr20 20963301 20963329 -51190553 + AT_rich Low_complexity Low_complexity 1 28 0 8534 23 1 0 chr20 20963329 20965104 -51188778 - L1PA3 LINE L1 -3 6152 4377 3112 24 0 3 chr20 20965104 20965485 -51188397 + L1P LINE L1 3921 4300 -1846 4089 145 44 20 chr20 20965485 20966263 -51187619 + L1MA8 LINE L1 5461 6265 -26 234 0 0 0 chr20 20966263 20966289 -51187593 + (TG)n Simple_repeat Simple_repeat 2 27 0 4089 145 44 20 chr20 20966289 20966307 -51187575 + L1MA8 LINE L1 6265 6281 -10 240 290 27 0 chr20 20966716 20966836 -51187046 + MLT1E LTR MaLR 20 183 -366 258 139 0 0 chr20 20966878 20966921 -51186961 + L2 LINE L2 2928 2970 -302 229 387 99 0 chr20 20966920 20967031 -51186851 + L2 LINE L2 3192 3313 0 * 2051 128 20 0 chr20 20967298 20967602 -51186280 + AluSx SINE Alu 3 312 0 411 324 6 6 chr20 20967714 20967893 -51185989 + (CA)n Simple_repeat Simple_repeat 2 180 0 1764 46 0 0 chr20 20968531 20968748 -51185134 - L1PA4 LINE L1 -3 6152 5936 2018 96 52 0 chr20 20969236 20969506 -51184376 + AluSx SINE Alu 1 284 -28 429 70 0 0 chr20 20970123 20970180 -51183702 + (TA)n Simple_repeat Simple_repeat 1 57 0 304 136 15 15 chr20 20971368 20971434 -51182448 + CT-rich Low_complexity Low_complexity 3 68 0 285 319 55 11 chr20 20971462 20971553 -51182329 - L2 LINE L2 -50 3263 3169 14086 145 24 5 chr20 20971558 20973931 -51179951 - Tigger1 DNA MER2_type 0 2418 1 245 29 29 0 chr20 20973938 20973972 -51179910 + (GA)n Simple_repeat Simple_repeat 2 36 0 263 169 0 84 chr20 20974567 20974638 -51179244 - MER103 DNA DNA -54 112 48 1743 142 17 13 chr20 20974718 20975020 -51178862 - MER1B DNA MER1_type 0 339 37 1107 168 84 15 chr20 20975043 20975246 -51178636 + U3 snRNA snRNA 1 217 0 740 188 9 13 chr20 20975255 20975485 -51178397 + GA-rich Low_complexity Low_complexity 1 228 0 930 167 0 0 chr20 20975499 20975728 -51178154 + GA-rich Low_complexity Low_complexity 1 229 0 758 277 62 30 chr20 20976354 20976711 -51177171 - LTR16A1 LTR ERVL 0 457 106 2345 85 3 23 chr20 20978691 20978996 -51174886 + AluSg SINE Alu 1 299 -11 943 297 146 11 chr20 20979271 20979729 -51174153 - MLT1H LTR MaLR -18 531 12 235 224 20 0 chr20 20980415 20980464 -51173418 - LTR16C LTR ERVL 0 491 442 192 152 0 0 chr20 20980619 20980652 -51173230 + (CATATA)n Simple_repeat Simple_repeat 5 37 0 3058 191 54 7 chr20 20980652 20981228 -51172654 + MER21B LTR ERV1 15 617 -246 501 292 88 22 chr20 20981257 20981483 -51172399 + MLT1H LTR MaLR 109 349 -200 2959 87 5 24 chr20 20981525 20981950 -51171932 + L1P4 LINE L1 5373 5789 -374 6135 195 56 71 chr20 20981950 20983703 -51170179 - MER52A LTR ERV1 0 1755 29 2897 79 3 3 chr20 20983943 20984312 -51169570 + L1PA13 LINE L1 5784 6152 -11 431 141 22 43 chr20 20984315 20984407 -51169475 + Charlie5 DNA MER1_type 2513 2602 -10 1907 144 10 0 chr20 20987552 20987843 -51166039 + AluSx SINE Alu 1 294 -18 264 215 31 0 chr20 20988240 20988305 -51165577 + MER94 DNA DNA 4 70 -64 1590 230 52 5 chr20 20988326 20988709 -51165173 + MLT1C LTR MaLR 13 413 -54 314 324 36 46 chr20 20989050 20989270 -51164612 - MIR SINE MIR -42 220 4 1433 275 67 53 chr20 20989673 20990237 -51163645 + MER50 LTR ERV1 3 574 -160 263 295 0 0 chr20 20991221 20991316 -51162566 + A-rich Low_complexity Low_complexity 1 95 0 3247 191 24 88 chr20 20991940 20992772 -51161110 - MER4E LTR ERV1 0 779 1 2984 233 52 17 chr20 20992948 20993778 -51160104 - L1ME2 LINE L1 -32 6132 5274 2735 235 86 24 chr20 20993796 20994523 -51159359 - L1ME2 LINE L1 -924 5222 4541 8996 170 8 22 chr20 20994523 20995599 -51158283 - L1PA13 LINE L1 -4 6159 5070 2129 154 73 14 chr20 20995599 20995943 -51157939 + THE1B LTR MaLR 1 364 0 12475 96 4 1 chr20 20995943 20997519 -51156363 + THE1B-int LTR MaLR 1 1580 0 2128 148 72 17 chr20 20997519 20997864 -51156018 + THE1B LTR MaLR 1 364 0 8996 170 8 22 chr20 20997864 20999169 -51154713 - L1PA13 LINE L1 -1090 5073 3765 2735 235 86 24 chr20 20999169 20999493 -51154389 - L1ME2 LINE L1 -1605 4541 4106 428 309 97 31 chr20 20999660 20999919 -51153963 + L2 LINE L2 2995 3270 -43 3403 104 20 0 chr20 21000210 21000651 -51153231 - MLT2A2 LTR ERVL -3 450 1 1401 206 84 12 chr20 21000804 21001123 -51152759 - MLT1A1 LTR MaLR 0 428 23 635 186 16 24 chr20 21001492 21001616 -51152266 - L1PA16 LINE L1 -14 6152 6030 458 291 17 41 chr20 21002420 21002592 -51151290 + MIR3 SINE MIR 14 181 -27 319 346 0 0 chr20 21002627 21002705 -51151177 - L3 LINE CR1 -88 1489 1412 22 0 0 0 chr20 21002967 21002989 -51150893 + AT_rich Low_complexity Low_complexity 1 22 0 299 305 156 13 chr20 21003026 21003180 -51150702 - MIR3 SINE MIR -3 205 30 186 43 0 0 chr20 21003316 21003339 -51150543 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1988 206 130 0 chr20 21003831 21004238 -51149644 + MER74C LTR ERVL 1 460 0 289 259 147 94 chr20 21005388 21005569 -51148313 - MIR SINE MIR -56 206 19 246 186 0 34 chr20 21005593 21005652 -51148230 + (TATG)n Simple_repeat Simple_repeat 2 58 0 1573 197 15 82 chr20 21005854 21006255 -51147627 - MLT1A2 LTR MaLR 0 374 1 1938 205 87 21 chr20 21006255 21006305 -51147577 - MLT1A2-int LTR MaLR 0 1735 1690 2060 128 7 7 chr20 21006305 21006610 -51147272 - AluSc SINE Alu -4 305 1 1938 205 87 21 chr20 21006610 21007101 -51146781 - MLT1A2-int LTR MaLR -45 1690 679 3239 218 35 5 chr20 21007626 21008260 -51145622 + MER82 DNA MER2_type 1 653 0 259 254 216 50 chr20 21008786 21008967 -51144915 - MIR SINE MIR -6 256 46 2598 113 54 0 chr20 21009568 21009938 -51143944 - MLT1B LTR MaLR 0 390 1 187 162 27 27 chr20 21011162 21011199 -51142683 + L2 LINE L2 3210 3246 -26 30 59 0 0 chr20 21011399 21011450 -51142432 + AT_rich Low_complexity Low_complexity 1 51 0 2526 249 56 36 chr20 21011887 21012846 -51141036 + L1ME1 LINE L1 5187 6161 -5 245 262 149 48 chr20 21013057 21013225 -51140657 - L2 LINE L2 -175 3097 2913 1118 243 57 25 chr20 21013397 21013751 -51140131 + L1MC4a LINE L1 7033 7397 -411 1498 225 8 54 chr20 21013760 21013973 -51139909 - MLT1A1 LTR MaLR -13 352 162 2411 95 0 0 chr20 21013973 21014277 -51139605 - AluSx SINE Alu -7 305 2 1498 225 8 54 chr20 21014277 21014432 -51139450 - MLT1A1 LTR MaLR -203 162 1 1909 212 24 19 chr20 21014436 21014861 -51139021 + L1MD3 LINE L1 7569 7995 0 1203 195 18 5 chr20 21016526 21016800 -51137082 + L1ME2 LINE L1 5545 5822 -342 1110 206 59 47 chr20 21016806 21017146 -51136736 - LTR48B LTR ERV1 0 644 301 * 2115 130 21 8 chr20 21017139 21017547 -51136335 - LTR49 LTR ERV1 -128 659 23 965 240 53 20 chr20 21017547 21017792 -51136090 - MER4D LTR ERV1 0 903 651 4034 162 21 13 chr20 21017792 21018509 -51135373 - MER50 LTR ERV1 0 734 12 565 184 0 9 chr20 21018515 21018624 -51135258 - MER4D LTR ERV1 -249 654 547 395 209 0 7 chr20 21018622 21018737 -51135145 - MER4E LTR ERV1 -588 284 62 * 1551 157 27 37 chr20 21018723 21019017 -51134865 - MER49 LTR ERV1 -629 294 4 1015 250 24 12 chr20 21019022 21019355 -51134527 + L1ME2 LINE L1 5835 6332 -2 977 221 43 29 chr20 21019466 21019674 -51134208 - MER58A DNA MER1_type -8 216 6 404 282 43 69 chr20 21019829 21020230 -51133652 + L1MC5 LINE L1 7246 7509 -452 1192 229 104 48 chr20 21020275 21020650 -51133232 + MSTD LTR MaLR 1 396 0 309 301 107 11 chr20 21020712 21020880 -51133002 + L1MC4 LINE L1 7738 7941 -101 2268 123 0 0 chr20 21020880 21021190 -51132692 + AluY SINE Alu 2 311 0 309 301 107 11 chr20 21021190 21021283 -51132599 + L1MC4 LINE L1 7941 8024 -18 3223 115 56 4 chr20 21021456 21021918 -51131964 - L1PA8A LINE L1 -1 6130 5645 534 181 11 0 chr20 21021918 21022012 -51131870 - ERVL LTR ERVL -1194 4570 4476 287 235 13 21 chr20 21022003 21022095 -51131787 - ERVL LTR ERVL -5395 267 170 * 529 303 88 52 chr20 21022095 21022416 -51131466 + L1ME LINE L1 4075 4418 -1728 2401 114 12 0 chr20 21022416 21022758 -51131124 + L1PA14 LINE L1 5816 6161 0 529 303 88 52 chr20 21022758 21022879 -51131003 + L1ME LINE L1 4418 4533 -1613 287 246 82 71 chr20 21022891 21023074 -51130808 + L1ME LINE L1 5609 5763 -399 1141 0 29 0 chr20 21023387 21023526 -51130356 + (TTTTA)n Simple_repeat Simple_repeat 4 146 0 1750 172 4 0 chr20 21023528 21023807 -51130075 - AluJb SINE Alu -32 280 1 192 236 101 90 chr20 21024002 21024091 -51129791 + L2 LINE L2 3171 3260 -12 2376 66 0 26 chr20 21024952 21025254 -51128628 - AluY SINE Alu 0 311 18 405 58 0 0 chr20 21025349 21025401 -51128481 + (CA)n Simple_repeat Simple_repeat 2 53 0 297 229 157 78 chr20 21025581 21025734 -51128148 - MIR SINE MIR -89 173 9 2117 142 0 0 chr20 21026642 21026952 -51126930 + AluSg SINE Alu 1 310 0 315 321 154 36 chr20 21027043 21027373 -51126509 - L2 LINE L2 0 3313 2945 22 35 0 0 chr20 21027512 21027541 -51126341 + AT_rich Low_complexity Low_complexity 1 29 0 196 225 0 0 chr20 21027549 21027589 -51126293 - MIR SINE MIR -151 111 72 270 320 10 21 chr20 21028854 21028951 -51124931 + L2 LINE L2 3137 3232 -40 291 319 52 26 chr20 21029077 21029193 -51124689 - MIR3 SINE MIR -12 196 78 282 281 107 16 chr20 21029464 21029585 -51124297 + L2 LINE L2 3182 3313 0 201 159 0 0 chr20 21032293 21032337 -51121545 + A-rich Low_complexity Low_complexity 1 44 0 337 389 35 20 chr20 21032576 21032774 -51121108 + MIR3 SINE MIR 6 206 -2 379 283 9 0 chr20 21034234 21034347 -51119535 - MER94 DNA DNA -17 117 4 1251 199 75 15 chr20 21037812 21038143 -51115739 + MLT1A1 LTR MaLR 15 365 0 1624 230 93 51 chr20 21038365 21038934 -51114948 + MLT1G1 LTR MaLR 3 595 0 2272 125 0 0 chr20 21039369 21039673 -51114209 - AluSx SINE Alu -8 304 1 4254 197 10 25 chr20 21040635 21041135 -51112747 + L1 LINE L1 2611 3117 -3029 2113 134 0 0 chr20 21041135 21041419 -51112463 + AluSg SINE Alu 12 295 -15 4254 197 10 25 chr20 21041419 21041958 -51111924 + L1 LINE L1 3117 3634 -2512 194 328 9 86 chr20 21042987 21043103 -51110779 + MIR3 SINE MIR 65 171 -37 1564 253 52 37 chr20 21043110 21043274 -51110608 + L1ME3A LINE L1 5560 5720 -450 1205 197 170 58 chr20 21043274 21043726 -51110156 + MLT1D LTR MaLR 3 505 0 1564 253 52 37 chr20 21043726 21044158 -51109724 + L1ME3A LINE L1 5720 6165 -5 1931 154 0 0 chr20 21044177 21044475 -51109407 + AluJo SINE Alu 1 298 -14 627 26 0 0 chr20 21045910 21045987 -51107895 - L1PA4 LINE L1 -8 6147 6071 627 248 39 63 chr20 21046024 21046102 -51107780 - MIR SINE MIR -6 256 178 795 294 85 43 chr20 21046102 21046572 -51107310 + LTR16C LTR ERVL 2 491 0 627 248 39 63 chr20 21046572 21046639 -51107243 - MIR SINE MIR -84 178 115 1721 193 42 8 chr20 21046639 21046992 -51106890 + MLT1A1 LTR MaLR 1 365 0 627 248 39 63 chr20 21046992 21047051 -51106831 - MIR SINE MIR -147 115 56 1391 169 35 12 chr20 21048362 21048617 -51105265 + AluJo SINE Alu 46 306 -6 714 58 0 29 chr20 21049697 21049800 -51104082 - L1PA4 LINE L1 0 6155 6056 285 291 75 22 chr20 21050347 21050481 -51103401 + MIR3 SINE MIR 23 163 -45 652 252 100 98 chr20 21050955 21051483 -51102399 + MLT1H1 LTR MaLR 26 554 -1 5450 142 9 27 chr20 21052093 21052494 -51101388 - L1P4 LINE L1 -437 5726 5319 2377 74 0 3 chr20 21052494 21052791 -51101091 + AluY SINE Alu 1 296 -15 5450 142 9 27 chr20 21052791 21053822 -51100060 - L1P4 LINE L1 -844 5319 4313 3029 94 25 0 chr20 21053822 21054250 -51099632 + L1PA13 LINE L1 5713 6157 -6 1102 140 109 8 chr20 21054279 21054536 -51099346 - L1MC2 LINE L1 -9 6335 6053 7940 173 97 65 chr20 21054537 21055066 -51098816 - L1MC3 LINE L1 -31 8172 7662 253 322 0 0 chr20 21055066 21055156 -51098726 - MLT1F1 LTR MaLR -442 125 36 7940 173 97 65 chr20 21055156 21056932 -51096950 - L1MC3 LINE L1 -541 7662 5701 41808 40 4 1 chr20 21056936 21063064 -51090818 - L1PA3 LINE L1 0 6155 12 1118 249 6 0 chr20 21063065 21063395 -51090487 - L1MC3 LINE L1 -846 5718 5387 * 4001 233 114 23 chr20 21063394 21064963 -51088919 - L1MC3 LINE L1 -2473 4091 2315 2871 0 0 3 chr20 21064963 21065275 -51088607 - AluYa5 SINE Alu 0 311 1 4001 233 114 23 chr20 21065275 21065612 -51088270 - L1MC3 LINE L1 -4249 2315 2010 1790 163 3 7 chr20 21065612 21065894 -51087988 - AluJo SINE Alu -31 281 1 6147 144 19 61 chr20 21065918 21066221 -51087661 - Tigger3b DNA MER2_type -1802 1226 912 3410 125 15 4 chr20 21066221 21066758 -51087124 + L1PA15 LINE L1 5620 6162 -3 6147 144 19 61 chr20 21066758 21067497 -51086385 - Tigger3b DNA MER2_type -2116 912 245 2332 86 3 0 chr20 21067497 21067787 -51086095 + AluSc SINE Alu 1 291 -18 6147 144 19 61 chr20 21067787 21068023 -51085859 - Tigger3b DNA MER2_type -2783 245 1 3359 198 26 36 chr20 21068027 21068215 -51085667 - L1MC3 LINE L1 -4494 2070 1882 963 114 0 0 chr20 21068215 21068347 -51085535 - FLAM_C SINE Alu 0 133 2 3359 198 26 36 chr20 21068347 21069276 -51084606 - L1MC3 LINE L1 -4682 1882 813 905 227 35 63 chr20 21069295 21069612 -51084270 - L1MC3 LINE L1 -5630 415 108 2392 103 0 0 chr20 21069944 21070254 -51083628 - AluSg SINE Alu 0 310 1 272 242 83 76 chr20 21070915 21071047 -51082835 - MIR3 SINE MIR -25 183 51 343 376 19 12 chr20 21072234 21072396 -51081486 + L2 LINE L2 2928 3090 -182 * 743 268 18 53 chr20 21072394 21072622 -51081260 + L2 LINE L2 2240 2459 -855 1001 276 68 16 chr20 21072622 21073046 -51080836 - LTR16A1 LTR ERVL 0 457 12 1564 276 99 4 chr20 21073755 21073774 -51080108 + MLT1G1 LTR MaLR 1 17 -578 258 32 0 0 chr20 21073774 21073805 -51080077 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 1564 276 99 4 chr20 21073805 21074321 -51079561 + MLT1G1 LTR MaLR 17 587 -8 2221 261 69 64 chr20 21074608 21075742 -51078140 + L2 LINE L2 2156 3312 -1 645 316 136 35 chr20 21075752 21076429 -51077453 + L2 LINE L2 2221 2965 -349 285 29 0 0 chr20 21076951 21076985 -51076897 + (TG)n Simple_repeat Simple_repeat 2 35 0 916 239 54 29 chr20 21076997 21077374 -51076508 - MLT2D LTR ERVL -69 395 14 235 217 17 17 chr20 21077712 21077772 -51076110 + LTR16A1 LTR ERVL 395 454 -3 1561 112 181 8 chr20 21078559 21078818 -51075064 - AluSg1 SINE Alu -5 304 1 216 356 37 37 chr20 21079429 21079592 -51074290 - L2 LINE L2 -552 2762 2600 254 326 63 11 chr20 21079890 21079985 -51073897 + MIR3 SINE MIR 85 184 -24 6754 56 4 37 chr20 21081108 21082757 -51071125 + L1PA7 LINE L1 4517 6141 -13 386 216 0 0 chr20 21082807 21082895 -51070987 + MER94 DNA DNA 13 100 -34 469 326 57 11 chr20 21083298 21083473 -51070409 - MIR3 SINE MIR -21 187 5 24 0 0 0 chr20 21083508 21083532 -51070350 + AT_rich Low_complexity Low_complexity 1 24 0 389 264 115 29 chr20 21083570 21083778 -51070104 - L1ME4a LINE L1 -58 6063 5838 1073 284 56 33 chr20 21084038 21084553 -51069329 + L1MC4a LINE L1 5407 5933 -1875 568 318 131 4 chr20 21085661 21085906 -51067976 + LTR16C LTR ERVL 82 357 -134 352 372 62 42 chr20 21085938 21086339 -51067543 + L1MEd LINE L1 3 411 -5708 912 277 86 58 chr20 21086412 21087582 -51066300 + L1MEd LINE L1 458 1712 -4598 534 226 38 19 chr20 21087779 21087938 -51065944 + L1ME3A LINE L1 6008 6169 -1 353 303 86 46 chr20 21088288 21088612 -51065270 + L1MEd LINE L1 2278 2614 -3515 3076 63 47 0 chr20 21088633 21089059 -51064823 - L1PA7 LINE L1 -301 5853 5408 2381 52 0 0 chr20 21089059 21089349 -51064533 + L1PA7 LINE L1 5847 6137 -17 1895 245 75 30 chr20 21090227 21090826 -51063056 - MLT1E2 LTR MaLR 0 626 1 863 297 72 11 chr20 21091384 21091761 -51062121 - LTR16C LTR ERVL -11 480 81 873 256 49 49 chr20 21092653 21093020 -51060862 - L1ME1 LINE L1 -5 6161 5795 1462 204 62 73 chr20 21093073 21093539 -51060343 - MLT1C LTR MaLR 0 467 7 6870 24 0 0 chr20 21095908 21096705 -51057177 + L1PA4 LINE L1 5356 6152 -3 25 0 0 0 chr20 21097159 21097184 -51056698 + AT_rich Low_complexity Low_complexity 1 25 0 1511 162 77 8 chr20 21097300 21097651 -51056231 - L1MA4A LINE L1 0 6303 5929 8289 163 26 10 chr20 21097821 21100088 -51053794 - L1MA4A LINE L1 -379 5924 3612 234 243 26 79 chr20 21100165 21100354 -51053528 + L1ME4a LINE L1 5943 6121 0 25 51 0 0 chr20 21100804 21100843 -51053039 + AT_rich Low_complexity Low_complexity 1 39 0 2899 76 15 2 chr20 21101839 21102458 -51051424 - L1PA7 LINE L1 -593 5561 4939 4784 59 2 0 chr20 21102458 21103050 -51050832 + L1PA7 LINE L1 5560 6154 0 2481 42 0 0 chr20 21103051 21103334 -51050548 + AluY SINE Alu 17 299 -12 447 311 0 34 chr20 21103596 21103715 -51050167 - MER5B DNA MER1_type -63 115 1 214 317 179 28 chr20 21103729 21103874 -51050008 + MER5A DNA MER1_type 21 187 -2 * 505 198 18 36 chr20 21103777 21103888 -51049994 - MER5A DNA MER1_type -77 112 4 213 271 71 0 chr20 21104863 21104933 -51048949 - MIR SINE MIR -47 215 141 645 221 62 7 chr20 21104978 21105123 -51048759 - MIR SINE MIR -65 197 45 21 36 0 0 chr20 21105471 21105499 -51048383 + AT_rich Low_complexity Low_complexity 1 28 0 882 259 202 26 chr20 21105545 21106081 -51047801 + MLT1G LTR MaLR 1 584 -6 31 0 0 0 chr20 21106671 21106702 -51047180 + AT_rich Low_complexity Low_complexity 1 31 0 447 114 46 23 chr20 21106707 21106882 -51047000 + (TA)n Simple_repeat Simple_repeat 2 180 0 1149 246 34 15 chr20 21107939 21108264 -51045618 - MER87 LTR ERV1 0 541 211 302 339 17 17 chr20 21108417 21108532 -51045350 - MER5B DNA MER1_type -55 123 9 2261 55 0 0 chr20 21109069 21109383 -51044499 - AluY SINE Alu 0 325 12 3680 148 43 3 chr20 21109522 21110229 -51043653 - L1MC1 LINE L1 -375 5958 5225 405 0 0 0 chr20 21110415 21110460 -51043422 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 828 259 149 58 chr20 21110904 21111544 -51042338 + L2 LINE L2 2579 3306 -7 317 310 18 9 chr20 21111659 21111772 -51042110 - MIR3 SINE MIR -32 176 63 320 285 77 0 chr20 21112332 21112462 -51041420 - MIR3 SINE MIR -4 204 65 345 171 34 0 chr20 21112660 21112748 -51041134 + (TA)n Simple_repeat Simple_repeat 2 92 0 225 265 123 31 chr20 21112882 21113044 -51040838 - L1ME LINE L1 -730 5436 5260 282 143 0 0 chr20 21113070 21113119 -51040763 + (TA)n Simple_repeat Simple_repeat 1 49 0 529 305 72 15 chr20 21113120 21113520 -51040362 - L1ME LINE L1 -921 5225 4803 198 239 45 75 chr20 21114782 21114849 -51039033 + MIR3 SINE MIR 15 79 -129 307 234 38 21 chr20 21114949 21115070 -51038812 - MIR SINE MIR -68 140 64 21 0 0 0 chr20 21115420 21115441 -51038441 + AT_rich Low_complexity Low_complexity 1 21 0 472 241 108 24 chr20 21116034 21116200 -51037682 + MER5A DNA MER1_type 9 188 -1 520 320 68 15 chr20 21116765 21116971 -51036911 - MIR SINE MIR -14 248 32 227 217 17 0 chr20 21117149 21117209 -51036673 - MLT1K LTR MaLR -6 582 522 307 299 102 83 chr20 21119905 21120229 -51033653 - L1MC4a LINE L1 -1639 6169 5840 562 188 8 8 chr20 21120235 21120352 -51033530 - L1MC4a LINE L1 -2004 5804 5688 1233 236 94 13 chr20 21120354 21120735 -51033147 + MLT1D LTR MaLR 2 413 -92 345 352 92 28 chr20 21120755 21120874 -51033008 - L1MC4a LINE L1 -798 5348 5238 1977 123 3 10 chr20 21120874 21121167 -51032715 - AluSq SINE Alu -1 312 22 345 352 92 28 chr20 21121167 21121540 -51032342 - L1MC4a LINE L1 -908 5238 4812 396 325 103 81 chr20 21121624 21121790 -51032092 + L1M2 LINE L1 45 206 -6643 366 61 0 0 chr20 21121790 21121839 -51032043 + (TGAG)n Simple_repeat Simple_repeat 2 50 0 396 325 103 81 chr20 21121839 21122020 -51031862 + L1M2 LINE L1 206 400 -6449 15749 210 20 21 chr20 21122836 21123945 -51029937 + L1PA15-16 LINE L1 1668 2776 -4073 207 0 0 0 chr20 21123945 21123968 -51029914 + (CA)n Simple_repeat Simple_repeat 2 24 0 15749 210 20 21 chr20 21123968 21125157 -51028725 + L1PA15-16 LINE L1 2776 3964 -2885 2257 118 0 0 chr20 21125157 21125454 -51028428 + AluSg SINE Alu 1 297 -13 15749 210 20 21 chr20 21125454 21126691 -51027191 + L1PA15-16 LINE L1 3964 5183 -1666 1591 21 0 16 chr20 21126691 21126879 -51027003 + AluYa5 SINE Alu 127 311 0 15749 210 20 21 chr20 21126879 21127753 -51026129 + L1PA15-16 LINE L1 5183 6056 -793 332 232 0 0 chr20 21127753 21127831 -51026051 + AluS SINE Alu 1 62 -238 1112 189 26 0 chr20 21227858 21228048 -50925834 - MER58A DNA MER1_type 0 224 30 1007 196 14 27 chr20 21229995 21230215 -50923667 + L1MC1 LINE L1 6092 6308 -25 1282 35 12 26 chr20 21230230 21230577 -50923305 + (GAAA)n Simple_repeat Simple_repeat 1 341 0 272 304 157 49 chr20 21230971 21230991 -50922891 + MIR SINE MIR 37 53 -209 1588 170 93 61 chr20 21230991 21231368 -50922514 - MLT1B LTR MaLR -1 389 1 272 304 157 49 chr20 21231368 21231551 -50922331 + MIR SINE MIR 53 262 0 360 316 7 33 chr20 21231556 21231708 -50922174 - MIR SINE MIR -113 149 2 537 273 17 6 chr20 21232221 21232397 -50921485 - MER5B DNA MER1_type 0 178 1 1153 171 11 91 chr20 21232419 21232694 -50921188 - MLT1C LTR MaLR -210 257 5 2291 98 10 0 chr20 21233195 21233491 -50920391 + AluSx SINE Alu 1 299 -13 8608 174 25 9 chr20 21233704 21235615 -50918267 + L1PA16 LINE L1 3559 5514 -652 2276 91 0 23 chr20 21235615 21235924 -50917958 + AluSc SINE Alu 1 302 -7 8608 174 25 9 chr20 21235924 21236579 -50917303 + L1PA16 LINE L1 5514 6157 -9 181 275 133 25 chr20 21236896 21237016 -50916866 + L3b LINE CR1 1355 1487 -96 255 234 107 111 chr20 21237016 21237260 -50916622 + L1ME4a LINE L1 5699 5941 -180 234 62 0 0 chr20 21238078 21238110 -50915772 + (CA)n Simple_repeat Simple_repeat 1 32 0 579 278 104 0 chr20 21238118 21238291 -50915591 + LTR16B LTR ERVL 8 198 -266 275 254 0 0 chr20 21238414 21238473 -50915409 + LTR16B LTR ERVL 392 450 -14 227 171 0 143 chr20 21238492 21238597 -50915285 - L1MC4 LINE L1 -1339 6703 6614 381 252 40 60 chr20 21239043 21239194 -50914688 - LTR67 LTR ERVL -1 556 409 2289 106 3 0 chr20 21240047 21240348 -50913534 + AluSp SINE Alu 1 302 -11 896 109 0 43 chr20 21240458 21240596 -50913286 + FLAM_C SINE Alu 1 132 -11 857 264 93 65 chr20 21241763 21242161 -50911721 - MLT1I LTR MaLR 0 409 1 21 36 0 0 chr20 21243271 21243299 -50910583 + AT_rich Low_complexity Low_complexity 1 28 0 702 182 94 68 chr20 21243418 21243610 -50910272 - MER3 DNA MER1_type -3 206 10 691 257 78 80 chr20 21244760 21245208 -50908674 - MLT1H LTR MaLR -4 545 99 635 224 100 0 chr20 21246190 21246360 -50907522 - MIR SINE MIR 0 262 76 1183 22 29 0 chr20 21246444 21246581 -50907301 + L1PA4 LINE L1 6015 6155 0 22 35 0 0 chr20 21246631 21246660 -50907222 + AT_rich Low_complexity Low_complexity 1 29 0 598 233 94 90 chr20 21246757 21246792 -50907090 - MLT1F LTR MaLR 0 555 522 1911 133 130 33 chr20 21246792 21247123 -50906759 - THE1B LTR MaLR 0 364 2 598 233 94 90 chr20 21247123 21247372 -50906510 - MLT1F LTR MaLR -33 522 270 549 211 18 0 chr20 21247372 21247481 -50906401 + MER54A LTR ERVL 1 111 -790 1532 172 52 99 chr20 21247481 21247864 -50906018 - MLT1A1 LTR MaLR 0 365 1 3741 191 18 3 chr20 21247889 21248512 -50905370 - MLT1A1-int LTR MaLR -12 1723 1092 180 0 0 0 chr20 21248538 21248558 -50905324 + (TTAGGG)n Simple_repeat Simple_repeat 4 23 0 47 61 0 0 chr20 21249509 21249591 -50904291 + AT_rich Low_complexity Low_complexity 1 82 0 423 304 120 14 chr20 21249748 21249965 -50903917 - MIR SINE MIR -1 261 22 271 219 0 0 chr20 21250038 21250102 -50903780 - AluJ/monomer SINE Alu 0 302 239 939 121 0 0 chr20 21250108 21250232 -50903650 - FLAM_C SINE Alu -19 124 1 329 356 124 10 chr20 21250681 21250883 -50902999 - MIR SINE MIR -31 231 7 395 352 6 0 chr20 21251804 21251980 -50901902 + (CA)n Simple_repeat Simple_repeat 2 178 0 445 180 94 39 chr20 21254153 21254281 -50899601 - L1ME4a LINE L1 -258 5863 5729 614 306 61 53 chr20 21254337 21254570 -50899312 + L3 LINE CR1 1165 1406 -171 1960 88 0 0 chr20 21254570 21254866 -50899016 + AluY SINE Alu 39 334 0 614 306 61 53 chr20 21254866 21255006 -50898876 + L3 LINE CR1 1406 1543 -34 23 0 0 0 chr20 21255311 21255334 -50898548 + AT_rich Low_complexity Low_complexity 1 23 0 1302 241 12 25 chr20 21255528 21255848 -50898034 - LTR16C LTR ERVL -1 490 175 889 222 69 9 chr20 21256976 21257192 -50896690 - LTR16C LTR ERVL -10 481 253 370 340 127 5 chr20 21257384 21257581 -50896301 + MIR SINE MIR 36 256 -6 952 236 43 111 chr20 21258279 21258838 -50895044 + MLT1H LTR MaLR 29 549 0 259 281 47 0 chr20 21258913 21258977 -50894905 + MER5A DNA MER1_type 72 138 -51 328 240 58 29 chr20 21258980 21259084 -50894798 + MER5A DNA MER1_type 59 165 -24 222 62 0 0 chr20 21259110 21259142 -50894740 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 213 245 142 66 chr20 21259181 21259287 -50894595 + L2 LINE L2 3192 3305 -8 205 317 109 20 chr20 21260428 21260529 -50893353 - L2 LINE L2 -7 3265 3156 1052 92 0 6 chr20 21261011 21261175 -50892707 + (TGGA)n Simple_repeat Simple_repeat 4 166 0 3190 171 81 23 chr20 21262035 21262651 -50891231 + MLT1E1 LTR MaLR 3 654 0 798 291 42 4 chr20 21262863 21263100 -50890782 + MIR SINE MIR 17 262 0 293 323 11 11 chr20 21263097 21263190 -50890692 - MIR SINE MIR -154 108 16 * 352 242 30 30 chr20 21263338 21263470 -50890412 + LTR16A1 LTR ERVL 320 451 -6 182 250 0 0 chr20 21263978 21264018 -50889864 + MIR SINE MIR 100 139 -69 550 296 56 0 chr20 21264673 21264852 -50889030 - MIR SINE MIR -8 254 66 449 302 125 33 chr20 21264879 21265240 -50888642 + L2 LINE L2 2371 2764 -550 401 286 48 42 chr20 21265396 21265585 -50888297 + L2 LINE L2 3122 3311 -2 210 171 0 0 chr20 21266076 21266111 -50887771 + A-rich Low_complexity Low_complexity 1 35 0 1946 117 3 50 chr20 21266740 21267039 -50886843 + AluSp SINE Alu 1 285 -28 1537 206 20 0 chr20 21267086 21267378 -50886504 + AluJo SINE Alu 1 298 -14 1048 203 66 14 chr20 21267438 21267650 -50886232 + MER58A DNA MER1_type 2 224 0 239 385 82 0 chr20 21267723 21267858 -50886024 + MIR3 SINE MIR 52 197 -11 972 302 125 20 chr20 21268071 21268478 -50885404 - LTR16C LTR ERVL 0 491 42 546 214 81 29 chr20 21268530 21268703 -50885179 - Charlie7 DNA MER1_type 0 2612 2431 2416 140 46 96 chr20 21268716 21269237 -50884645 + L1MB3 LINE L1 5686 6180 -3 274 252 78 39 chr20 21269248 21269351 -50884531 - Charlie7 DNA MER1_type -2501 111 5 272 287 37 59 chr20 21269499 21269635 -50884247 + MIR SINE MIR 28 160 -102 2402 193 62 33 chr20 21269691 21270210 -50883672 - MLT1F LTR MaLR 0 542 9 618 288 90 65 chr20 21270220 21270830 -50883052 - L2 LINE L2 -76 3237 2595 505 179 86 14 chr20 21271511 21271651 -50882231 + MER113 DNA MER1_type? 67 216 -305 2053 254 63 29 chr20 21272206 21272852 -50881030 + L1ME2 LINE L1 5497 6164 0 624 273 51 31 chr20 21273397 21273653 -50880229 - L1ME LINE L1 -329 5792 5532 1072 173 14 43 chr20 21274114 21274322 -50879560 + AluJo SINE Alu 101 302 -10 621 85 8 47 chr20 21274329 21274458 -50879424 + (GGAA)n Simple_repeat Simple_repeat 4 127 0 1657 224 114 11 chr20 21274913 21275368 -50878514 - L1ME1 LINE L1 -19 6147 5646 1034 219 52 64 chr20 21275846 21276234 -50877648 - Tigger8 DNA MER2_type -62 604 222 740 189 0 0 chr20 21276455 21276566 -50877316 + FLAM_A SINE Alu 1 111 -31 236 329 29 15 chr20 21276947 21277084 -50876798 - L2 LINE L2 -2557 757 619 424 305 33 12 chr20 21277906 21278084 -50875798 + MIR SINE MIR 17 197 -61 1327 148 5 28 chr20 21279057 21279273 -50874609 - AluJo SINE Alu -16 296 86 2345 90 0 0 chr20 21279925 21280215 -50873667 - AluSg1 SINE Alu -19 290 1 1891 151 33 30 chr20 21280681 21280985 -50872897 + AluJo SINE Alu 1 305 -7 531 214 20 0 chr20 21280989 21281087 -50872795 - MER5A DNA MER1_type -87 102 3 717 181 19 151 chr20 21281127 21281332 -50872550 + MER5B DNA MER1_type 1 178 0 180 135 54 0 chr20 21281452 21281489 -50872393 + L2 LINE L2 3270 3308 -5 885 277 102 11 chr20 21281781 21282135 -50871747 + MER113 DNA MER1_type? 61 446 -75 680 283 45 18 chr20 21282760 21282983 -50870899 + MIR SINE MIR 18 246 -16 1352 283 31 5 chr20 21283174 21283566 -50870316 - L1MC4a LINE L1 -1873 5935 5534 1158 192 121 42 chr20 21283574 21283647 -50870235 - Charlie4a DNA MER1_type -1502 459 393 1950 204 17 0 chr20 21283647 21284004 -50869878 - MLT1A1 LTR MaLR -2 363 1 1158 192 121 42 chr20 21284004 21284311 -50869571 - Charlie4a DNA MER1_type -1568 393 49 22 35 0 0 chr20 21284623 21284652 -50869230 + AT_rich Low_complexity Low_complexity 1 29 0 2013 116 34 17 chr20 21284822 21285116 -50868766 + AluSx SINE Alu 1 299 -13 2448 75 3 13 chr20 21285116 21285424 -50868458 + AluY SINE Alu 6 310 -1 313 211 0 26 chr20 21286570 21286646 -50867236 - MER91A DNA MER1_type -122 74 1 1016 209 47 5 chr20 21287232 21287447 -50866435 - MER58A DNA MER1_type 0 224 1 210 235 62 25 chr20 21287532 21287613 -50866269 - MIR SINE MIR -57 205 122 405 290 121 0 chr20 21291039 21291163 -50862719 + L2 LINE L2 3134 3272 0 227 312 65 40 chr20 21291193 21291392 -50862490 + L1ME3 LINE L1 244 447 -5672 203 302 62 42 chr20 21292612 21292708 -50861174 - MIR SINE MIR -108 154 57 38663 77 19 7 chr20 21293555 21299622 -50854260 + L1PA6 LINE L1 11 6151 -3 420 233 67 83 chr20 21300182 21300375 -50853507 + L1MC5 LINE L1 7740 7929 -32 783 226 59 0 chr20 21300564 21300750 -50853132 - MIR SINE MIR -18 244 48 327 274 88 0 chr20 21303236 21303349 -50850533 + MIR SINE MIR 120 242 -20 294 73 0 0 chr20 21304246 21304287 -50849595 + (A)n Simple_repeat Simple_repeat 1 41 0 277 274 53 9 chr20 21304651 21304764 -50849118 + L1ME3 LINE L1 3990 4107 -2022 433 287 62 3 chr20 21304776 21305065 -50848817 + L1ME3 LINE L1 4386 4691 -1438 223 250 0 0 chr20 21305065 21305117 -50848765 + GA-rich Low_complexity Low_complexity 1 52 0 402 260 117 38 chr20 21305159 21305501 -50848381 + L1ME3 LINE L1 4708 5076 -1053 2649 165 43 10 chr20 21305511 21305997 -50847885 - MER4E LTR ERV1 -28 748 252 514 267 83 27 chr20 21306004 21306710 -50847172 + L1ME3 LINE L1 5069 5871 -282 2389 82 0 0 chr20 21306936 21307229 -50846653 - AluSg SINE Alu -17 293 1 1863 140 46 7 chr20 21307229 21307514 -50846368 - AluSx SINE Alu -16 296 1 24 67 0 0 chr20 21307625 21307670 -50846212 + AT_rich Low_complexity Low_complexity 1 45 0 917 256 114 48 chr20 21308025 21308446 -50845436 - MLT1J2 LTR MaLR 0 450 2 2091 115 55 30 chr20 21308506 21308870 -50845012 + THE1C LTR MaLR 1 373 -2 1594 208 51 58 chr20 21308935 21309402 -50844480 - MLT2C2 LTR ERVL 0 464 1 664 227 148 10 chr20 21309446 21309649 -50844233 + MIR SINE MIR 11 241 -21 1033 235 113 88 chr20 21310019 21310427 -50843455 - MLT1H LTR MaLR -17 532 115 1979 131 7 3 chr20 21311169 21311466 -50842416 + AluJb SINE Alu 15 312 0 816 219 91 30 chr20 21312127 21312392 -50841490 - L1ME3A LINE L1 -1 6169 5889 216 86 0 0 chr20 21312661 21312696 -50841186 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 839 257 130 17 chr20 21313478 21313840 -50840042 - LTR16C LTR ERVL 0 491 89 634 185 9 21 chr20 21316224 21316715 -50837167 + CT-rich Low_complexity Low_complexity 1 485 0 22 35 0 0 chr20 21317344 21317373 -50836509 + AT_rich Low_complexity Low_complexity 1 29 0 268 349 24 48 chr20 21317663 21317872 -50836010 - L2 LINE L2 -4 3309 3106 423 299 206 16 chr20 21319412 21319796 -50834086 - LTR16B LTR ERVL 0 464 8 671 235 24 0 chr20 21320113 21320279 -50833603 - MLT1G LTR MaLR 0 590 421 22 0 0 0 chr20 21320655 21320677 -50833205 + AT_rich Low_complexity Low_complexity 1 22 0 1187 252 77 19 chr20 21321030 21321447 -50832435 + LTR16A1 LTR ERVL 4 444 -13 1796 152 50 0 chr20 21321573 21321856 -50832026 - AluJb SINE Alu -15 297 1 293 200 14 14 chr20 21322116 21322186 -50831696 - LTR37B LTR ERV1 -258 210 141 246 330 0 0 chr20 21322213 21322301 -50831581 + MER58A DNA MER1_type 1 88 -19 225 325 111 17 chr20 21322497 21322614 -50831268 + MIR SINE MIR 16 143 -65 2232 118 0 3 chr20 21323018 21323314 -50830568 + AluSq SINE Alu 6 300 -13 2145 124 71 42 chr20 21323910 21324264 -50829618 - THE1B LTR MaLR 0 364 1 1889 121 17 75 chr20 21324274 21324621 -50829261 + MLT1C LTR MaLR 1 327 -140 384 162 15 0 chr20 21324728 21324796 -50829086 + MLT1C LTR MaLR 372 440 -27 391 231 179 17 chr20 21325147 21325264 -50828618 - MER63 DNA MER1_type -299 763 2 1104 260 94 44 chr20 21327024 21327458 -50826424 - LTR16C LTR ERVL 0 491 36 629 176 9 9 chr20 21328359 21328467 -50825415 - MER81 DNA DNA -4 110 3 345 328 99 0 chr20 21328874 21329005 -50824877 - MLT1I LTR MaLR -265 144 1 1881 139 0 72 chr20 21329405 21329737 -50824145 + AluSx SINE Alu 1 308 -4 399 266 106 66 chr20 21329784 21330495 -50823387 + L1ME4a LINE L1 5350 6099 -22 659 213 94 25 chr20 21330973 21331175 -50822707 - MER20 DNA MER1_type 0 219 4 1240 142 111 66 chr20 21331328 21331616 -50822266 - AluJo SINE Alu -1 301 1 276 235 211 24 chr20 21331734 21331900 -50821982 + LTR33A LTR ERVL 327 523 0 345 125 0 0 chr20 21331923 21331979 -50821903 + (TA)n Simple_repeat Simple_repeat 1 56 0 * 353 217 0 0 chr20 21331924 21331979 -50821903 + L1MC4 LINE L1 6636 6693 -1349 2110 89 14 0 chr20 21331979 21332260 -50821622 - AluSp SINE Alu -27 286 2 353 217 0 0 chr20 21332260 21332273 -50821609 + L1MC4 LINE L1 6692 6704 -1338 2478 42 7 3 chr20 21332452 21332762 -50821120 - AluY SINE Alu 0 311 1 327 283 40 0 chr20 21332805 21332904 -50820978 + MIR SINE MIR 159 261 -1 1172 186 3 114 chr20 21333040 21333346 -50820536 - MLT1A1 LTR MaLR -93 272 1 1413 246 120 39 chr20 21333679 21334187 -50819695 - MLT1H LTR MaLR 0 549 1 1807 99 148 0 chr20 21334350 21334613 -50819269 - AluSx SINE Alu -10 302 1 202 239 18 37 chr20 21335553 21335662 -50818220 + (TA)n Simple_repeat Simple_repeat 2 108 0 1976 117 27 3 chr20 21338398 21338696 -50815186 + AluSx SINE Alu 1 305 -7 189 300 0 33 chr20 21339836 21339896 -50813986 - MIR3 SINE MIR -23 185 128 961 258 118 7 chr20 21340646 21340973 -50812909 - LTR16A1 LTR ERVL -19 469 100 271 299 88 36 chr20 21341321 21341458 -50812424 + L3 LINE CR1 1223 1366 -211 408 184 101 9 chr20 21341545 21341654 -50812228 - L1ME3A LINE L1 -5 6165 6047 1778 246 86 0 chr20 21341686 21342117 -50811765 - L1ME3A LINE L1 -311 5859 5392 212 329 22 58 chr20 21342117 21342254 -50811628 - MER5A DNA MER1_type -33 156 25 560 199 146 82 chr20 21342371 21342638 -50811244 - MLT1J LTR MaLR -4 507 224 186 43 0 0 chr20 21342641 21342664 -50811218 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 231 114 0 0 chr20 21342664 21342699 -50811183 + (GA)n Simple_repeat Simple_repeat 2 36 0 523 262 39 52 chr20 21342710 21342943 -50810939 - MLT1J LTR MaLR -260 251 22 192 253 120 13 chr20 21342975 21343050 -50810832 + MIR3 SINE MIR 93 175 -33 467 271 80 20 chr20 21343281 21343432 -50810450 - MIR SINE MIR -26 236 77 344 269 50 25 chr20 21343795 21343914 -50809968 - MIR3 SINE MIR -5 203 82 1060 60 0 0 chr20 21344247 21344380 -50809502 + L1MA3 LINE L1 6173 6305 0 254 275 69 46 chr20 21344455 21344586 -50809296 - MER5A DNA MER1_type -6 183 50 * 274 272 35 26 chr20 21344473 21344587 -50809295 + MER5B DNA MER1_type 26 140 -38 463 156 100 0 chr20 21344674 21344764 -50809118 + MER5B DNA MER1_type 80 178 0 256 323 194 7 chr20 21344779 21344934 -50808948 - MER5A DNA MER1_type -5 184 1 215 317 154 0 chr20 21345023 21345127 -50808755 + L2 LINE L2 3136 3255 -17 28 0 0 0 chr20 21345276 21345304 -50808578 + AT_rich Low_complexity Low_complexity 1 28 0 1439 46 14 60 chr20 21345943 21346160 -50807722 - L1PA5 LINE L1 -1 6153 5947 486 247 72 6 chr20 21346339 21346505 -50807377 + MER112 DNA MER1_type 5 181 -79 724 210 19 25 chr20 21346526 21346688 -50807194 - MER5B DNA MER1_type 0 178 18 202 333 143 24 chr20 21346812 21346896 -50806986 - L2 LINE L2 -19 3253 3160 2095 230 77 13 chr20 21346906 21347515 -50806367 - L1ME3A LINE L1 -72 6098 5451 1779 153 4 4 chr20 21348098 21348403 -50805479 - AluJo SINE Alu 0 305 1 211 135 162 0 chr20 21348441 21348478 -50805404 + MER91B DNA MER1_type 22 64 -126 942 259 67 7 chr20 21348549 21348892 -50804990 - L1ME3A LINE L1 -76 6094 5734 183 314 0 0 chr20 21349035 21349086 -50804796 + MIR SINE MIR 103 153 -109 964 267 113 3 chr20 21349099 21349410 -50804472 - L1ME2 LINE L1 -9 6155 5811 1474 250 64 15 chr20 21349665 21350137 -50803745 - Charlie4a DNA MER1_type -6 502 8 240 262 196 0 chr20 21350149 21350256 -50803626 + MIR SINE MIR 124 251 -11 433 290 101 42 chr20 21351856 21352073 -50801809 - MIR SINE MIR -21 241 12 282 307 66 25 chr20 21352162 21352293 -50801589 - MIR SINE MIR -69 139 7 836 180 99 6 chr20 21352629 21352801 -50801081 + MER3 DNA MER1_type 18 205 -4 223 320 160 0 chr20 21353662 21353762 -50800120 - MIR3 SINE MIR -14 194 79 450 260 10 0 chr20 21353857 21353957 -50799925 + L2 LINE L2 3211 3311 -2 2156 100 0 0 chr20 21355004 21355293 -50798589 - AluSx SINE Alu -15 297 9 2200 92 3 0 chr20 21355522 21355825 -50798057 - AluSg SINE Alu -6 304 1 238 209 0 81 chr20 21356037 21356123 -50797759 - L1ME4a LINE L1 0 6121 6043 470 212 281 37 chr20 21356535 21356752 -50797130 + LTR16A1 LTR ERVL 4 273 -184 758 228 66 22 chr20 21357416 21357807 -50796075 - LTR16A1 LTR ERVL 0 457 3 860 220 0 41 chr20 21358742 21358960 -50794922 - MER3 DNA MER1_type 0 209 1 192 218 26 13 chr20 21358976 21359054 -50794828 + (TA)n Simple_repeat Simple_repeat 1 79 0 225 0 0 0 chr20 21359746 21359771 -50794111 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr20 21359801 21359822 -50794060 + AT_rich Low_complexity Low_complexity 1 21 0 180 291 13 63 chr20 21360740 21360819 -50793063 + L2 LINE L2 3198 3272 0 2440 55 7 0 chr20 21361952 21362259 -50791623 + AluY SINE Alu 1 309 -2 255 341 16 47 chr20 21362270 21362399 -50791483 - MIR SINE MIR -135 127 3 2521 55 0 0 chr20 21362614 21362923 -50790959 - AluY SINE Alu -2 309 1 857 244 16 5 chr20 21363018 21363211 -50790671 - LTR16C LTR ERVL 0 491 297 253 227 99 116 chr20 21363455 21363533 -50790349 - MIR3 SINE MIR -23 185 107 2200 112 0 3 chr20 21363533 21363846 -50790036 + AluSx SINE Alu 1 312 0 253 227 99 116 chr20 21363846 21363939 -50789943 - MIR3 SINE MIR -101 107 17 198 0 0 0 chr20 21364777 21364799 -50789083 + (A)n Simple_repeat Simple_repeat 1 22 0 231 195 49 37 chr20 21366313 21366395 -50787487 + L1MC4 LINE L1 6616 6698 -1344 807 214 37 81 chr20 21367169 21367288 -50786594 - MER112 DNA MER1_type 0 260 137 396 59 0 0 chr20 21367288 21367339 -50786543 + (AATAG)n Simple_repeat Simple_repeat 2 52 0 807 214 37 81 chr20 21367339 21367490 -50786392 - MER112 DNA MER1_type -123 137 2 600 249 154 71 chr20 21367499 21367899 -50785983 - MLT1J2 LTR MaLR 0 450 1 27 87 0 0 chr20 21368041 21368110 -50785772 + AT_rich Low_complexity Low_complexity 1 69 0 979 155 6 0 chr20 21368150 21368311 -50785571 + AluJb SINE Alu 134 295 -17 1895 113 19 44 chr20 21370222 21370257 -50783625 - AluSx SINE Alu -2 310 276 222 37 0 0 chr20 21370257 21370284 -50783598 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1895 113 19 44 chr20 21370284 21370566 -50783316 - AluSx SINE Alu -36 276 1 853 217 136 5 chr20 21370726 21370924 -50782958 + MER58A DNA MER1_type 1 224 0 516 320 35 35 chr20 21371024 21371283 -50782599 + LTR16C LTR ERVL 140 398 -93 420 156 125 16 chr20 21371280 21371408 -50782474 - LTR50 LTR ERVL -14 781 640 * 1143 192 225 15 chr20 21371875 21372106 -50781776 - LTR50 LTR ERVL -166 629 448 2278 150 8 3 chr20 21372106 21372467 -50781415 - MLT1A1 LTR MaLR 0 365 3 1143 192 225 15 chr20 21372467 21372680 -50781202 - LTR50 LTR ERVL -347 448 10 276 162 40 27 chr20 21372683 21372757 -50781125 + LTR16C LTR ERVL 408 482 -9 1023 282 52 24 chr20 21373236 21373619 -50780263 - LTR16C LTR ERVL 0 491 98 798 299 76 24 chr20 21374225 21374683 -50779199 + L2 LINE L2 2832 3313 0 251 273 0 0 chr20 21375476 21375531 -50778351 + L2 LINE L2 3217 3271 -1 1002 253 94 14 chr20 21375657 21376060 -50777822 + LTR16C LTR ERVL 2 489 -2 529 256 85 0 chr20 21378460 21378624 -50775258 - MER45A DNA AcHobo 0 178 1 200 217 0 0 chr20 21379750 21379796 -50774086 + T-rich Low_complexity Low_complexity 1 46 0 226 208 0 0 chr20 21379868 21379916 -50773966 - L1MC4 LINE L1 -1340 6702 6655 277 281 0 0 chr20 21379927 21380016 -50773866 - L1MC4 LINE L1 -1339 6703 6615 230 152 0 0 chr20 21380045 21380091 -50773791 - LTR66 LTR ERVL -171 439 394 291 191 0 0 chr20 21380091 21380154 -50773728 + (TA)n Simple_repeat Simple_repeat 2 64 0 444 256 45 0 chr20 21380166 21380299 -50773583 + L1MC4 LINE L1 7904 8042 0 600 243 135 46 chr20 21380994 21381253 -50772629 + L2 LINE L2 3032 3313 0 1537 172 16 23 chr20 21381704 21382007 -50771875 - AluJb SINE Alu -11 301 1 2062 111 3 0 chr20 21382110 21382399 -50771483 + AluSx SINE Alu 11 300 -12 2209 197 18 16 chr20 21382787 21383223 -50770659 + Tigger3(Golem) DNA MER2_type 1 437 -2592 250 171 29 14 chr20 21383212 21383282 -50770600 + Tigger3(Golem) DNA MER2_type 2451 2521 -508 * 437 184 51 0 chr20 21383440 21383538 -50770344 - MER5A DNA MER1_type -78 111 9 1874 92 35 0 chr20 21383743 21384003 -50769879 + AluSx SINE Alu 1 269 -43 323 78 39 0 chr20 21384023 21384074 -50769808 + AluSx SINE Alu 246 298 -4 1701 231 117 10 chr20 21384639 21385162 -50768720 + L1MC4a LINE L1 7229 7807 -1 1456 171 10 45 chr20 21385493 21385785 -50768097 - AluJb SINE Alu -25 287 6 510 213 199 0 chr20 21385956 21386097 -50767785 - MIR SINE MIR -45 217 49 209 157 78 20 chr20 21387225 21387276 -50766606 + L2 LINE L2 3121 3174 -98 266 0 29 0 chr20 21387365 21387399 -50766483 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 498 230 86 0 chr20 21387717 21387891 -50765991 - MER5A DNA MER1_type 0 189 1 461 217 51 14 chr20 21388197 21388335 -50765547 + MER5A DNA MER1_type 3 145 -44 836 236 123 44 chr20 21388343 21388817 -50765065 + MLT1E2 LTR MaLR 7 552 -73 533 198 102 23 chr20 21388890 21388982 -50764900 + Charlie4 DNA MER1_type 1738 1821 -140 1834 165 0 3 chr20 21388982 21389285 -50764597 - AluJb SINE Alu -10 302 1 533 198 102 23 chr20 21389285 21389369 -50764513 + Charlie4 DNA MER1_type 1821 1928 -33 409 220 39 136 chr20 21389654 21389733 -50764149 + MER112 DNA MER1_type 1 86 -174 306 0 0 0 chr20 21389733 21389767 -50764115 + (TG)n Simple_repeat Simple_repeat 2 35 0 409 220 39 136 chr20 21389767 21389973 -50763909 + MER112 DNA MER1_type 86 258 -2 282 150 24 47 chr20 21390010 21390137 -50763745 + (CA)n Simple_repeat Simple_repeat 1 124 0 238 259 0 0 chr20 21391152 21391206 -50762676 - MER81 DNA DNA -58 56 3 1371 201 34 60 chr20 21391529 21391913 -50761969 + MLT1A2 LTR MaLR 1 374 0 305 377 22 0 chr20 21391987 21392125 -50761757 + MIR3 SINE MIR 30 170 -38 306 284 205 0 chr20 21392585 21392712 -50761170 - MER5A DNA MER1_type 0 189 37 188 303 165 37 chr20 21393173 21393282 -50760600 - MER5B DNA MER1_type -53 125 3 795 191 0 0 chr20 21393440 21393571 -50760311 - FLAM_A SINE Alu -2 131 1 1073 218 79 21 chr20 21393887 21394167 -50759715 + L1ME LINE L1 5301 5596 -570 1689 178 0 10 chr20 21394897 21395189 -50758693 + AluJo SINE Alu 3 291 -21 329 244 154 41 chr20 21395237 21395360 -50758522 + MIR SINE MIR 13 149 -113 650 278 104 50 chr20 21395377 21395780 -50758102 + LTR16A1 LTR ERVL 30 454 -3 255 61 0 0 chr20 21395846 21395879 -50758003 + (CAT)n Simple_repeat Simple_repeat 2 34 0 1526 204 103 24 chr20 21396133 21396588 -50757294 - LTR16C LTR ERVL 0 491 1 235 288 45 0 chr20 21396626 21396692 -50757190 - MIR SINE MIR -115 147 79 195 259 165 42 chr20 21396730 21396942 -50756940 + L3 LINE CR1 1166 1403 -174 182 146 49 24 chr20 21397348 21397389 -50756493 + MER5A DNA MER1_type 34 75 -114 * 255 143 41 0 chr20 21397386 21397435 -50756447 - MER5A DNA MER1_type -84 105 55 1132 162 0 68 chr20 21397469 21397703 -50756179 + MER20 DNA MER1_type 2 219 0 2148 100 7 0 chr20 21398507 21398796 -50755086 + AluSp SINE Alu 1 291 -22 21 36 0 0 chr20 21398796 21398824 -50755058 + AT_rich Low_complexity Low_complexity 1 28 0 193 28 0 56 chr20 21399795 21399831 -50754051 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1456 98 0 0 chr20 21399851 21400044 -50753838 - AluSx SINE Alu -119 193 1 1608 153 18 11 chr20 21400044 21400326 -50753556 - MER33 DNA MER1_type -40 284 1 245 198 198 12 chr20 21401256 21401337 -50752545 - MLT1K LTR MaLR -348 240 145 716 171 55 111 chr20 21402537 21402736 -50751146 + MER5A DNA MER1_type 1 188 -1 205 255 13 67 chr20 21403075 21403224 -50750658 + CT-rich Low_complexity Low_complexity 1 141 0 714 253 77 9 chr20 21404141 21404374 -50749508 - LTR16C LTR ERVL -8 483 235 250 407 28 7 chr20 21404652 21404797 -50749085 + MIR3 SINE MIR 23 170 -38 311 288 50 22 chr20 21404876 21405015 -50748867 + MER113 DNA MER1_type? 22 164 -357 437 227 15 76 chr20 21405207 21405339 -50748543 - MIR SINE MIR -58 204 81 227 301 81 58 chr20 21406345 21406518 -50747364 + MER117 DNA MER1_type 2 178 -19 290 253 33 11 chr20 21407812 21407903 -50745979 - MIR SINE MIR -54 208 116 496 244 24 0 chr20 21407980 21408103 -50745779 + LTR16C LTR ERVL 149 274 -217 818 221 31 78 chr20 21408174 21408432 -50745450 + MLT1J LTR MaLR 17 262 -249 23 0 0 0 chr20 21408599 21408622 -50745260 + GC_rich Low_complexity Low_complexity 1 23 0 3852 148 29 24 chr20 21408622 21409345 -50744537 - L1MB3 LINE L1 -12 6171 5445 2353 66 0 3 chr20 21409908 21410209 -50743673 + AluY SINE Alu 3 302 -9 21 36 0 0 chr20 21410699 21410727 -50743155 + AT_rich Low_complexity Low_complexity 1 28 0 203 292 208 31 chr20 21411398 21411494 -50742388 + MER5A DNA MER1_type 51 163 -26 261 0 0 0 chr20 21411523 21411552 -50742330 + (TG)n Simple_repeat Simple_repeat 1 29 0 2052 102 0 11 chr20 21411552 21411836 -50742046 - AluSx SINE Alu -31 281 1 226 273 172 0 chr20 21411860 21411959 -50741923 - L1MC4a LINE L1 -1688 6120 6005 234 81 0 0 chr20 21411969 21412006 -50741876 + (TG)n Simple_repeat Simple_repeat 2 38 0 449 248 131 0 chr20 21412079 21412232 -50741650 - L1MC4a LINE L1 -1986 5822 5650 253 349 28 0 chr20 21412304 21412410 -50741472 - L1MC4a LINE L1 -2126 5682 5574 700 172 179 0 chr20 21412522 21412656 -50741226 - MER5A DNA MER1_type -28 161 4 324 272 9 29 chr20 21412738 21412848 -50741034 + MIR SINE MIR 46 152 -67 1496 186 38 22 chr20 21412868 21413185 -50740697 + L1ME2 LINE L1 5841 6162 -2 24 0 0 0 chr20 21413799 21413823 -50740059 + GC_rich Low_complexity Low_complexity 1 24 0 2263 68 27 0 chr20 21414601 21414895 -50738987 + AluSx SINE Alu 11 312 0 24 67 0 0 chr20 21414915 21414960 -50738922 + AT_rich Low_complexity Low_complexity 1 45 0 442 113 0 0 chr20 21414960 21415022 -50738860 - FLAM_A SINE Alu -27 115 54 27 0 0 0 chr20 21415126 21415153 -50738729 + AT_rich Low_complexity Low_complexity 1 27 0 692 161 7 54 chr20 21415530 21415679 -50738203 + FLAM_C SINE Alu 2 143 0 369 199 11 24 chr20 21416035 21416125 -50737757 - MLT1I LTR MaLR -265 144 72 327 214 67 22 chr20 21416468 21416557 -50737325 - MLT1I LTR MaLR -315 94 2 182 317 17 0 chr20 21416793 21416853 -50737029 + MIR SINE MIR 90 150 -112 410 298 44 0 chr20 21416865 21416979 -50736903 - MER94 DNA DNA 0 134 16 1328 217 46 108 chr20 21417009 21417198 -50736684 + L1MC4 LINE L1 7473 7672 -370 2037 121 3 7 chr20 21417198 21417504 -50736378 + AluSx SINE Alu 1 305 -7 1328 217 46 108 chr20 21417504 21417709 -50736173 + L1MC4 LINE L1 7672 7820 -222 2052 116 0 7 chr20 21417709 21418003 -50735879 + AluSc SINE Alu 1 292 -17 1328 217 46 108 chr20 21418003 21418210 -50735672 + L1MC4 LINE L1 7820 8038 -4 197 81 0 27 chr20 21418382 21418419 -50735463 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 676 188 0 8 chr20 21418420 21418537 -50735345 - FLAM_C SINE Alu -26 117 2 1592 167 67 0 chr20 21418729 21419011 -50734871 + AluJb SINE Alu 1 301 -11 253 266 255 0 chr20 21419253 21419347 -50734535 + MIR3 SINE MIR 66 183 -25 620 190 132 0 chr20 21419347 21419468 -50734414 + MLT1B LTR MaLR 1 137 -253 315 87 22 0 chr20 21419464 21419510 -50734372 + MLT1B LTR MaLR 344 390 0 * 243 258 32 0 chr20 21420043 21420105 -50733777 + MER90 LTR ERV1 512 575 0 508 228 32 150 chr20 21420105 21420296 -50733586 + L1MC4 LINE L1 7625 7728 -314 1893 160 0 10 chr20 21420296 21420608 -50733274 + AluJb SINE Alu 1 309 -3 508 228 32 150 chr20 21420608 21420890 -50732992 + L1MC4 LINE L1 7728 8042 0 1573 187 13 7 chr20 21421566 21421876 -50732006 - AluJo SINE Alu 0 312 1 1459 162 0 63 chr20 21421958 21422260 -50731622 + AluJb SINE Alu 30 312 0 465 240 0 62 chr20 21423090 21423236 -50730646 + LTR33 LTR ERVL 24 160 -361 365 233 0 44 chr20 21423293 21423383 -50730499 + LTR33 LTR ERVL 329 414 -107 1019 180 0 0 chr20 21423505 21423672 -50730210 + FAM SINE Alu 1 167 -8 562 256 43 72 chr20 21424586 21424768 -50729114 - MER63A DNA MER1_type -1478 210 33 1621 188 0 20 chr20 21424768 21425072 -50728810 + AluJo SINE Alu 1 298 -14 562 256 43 72 chr20 21425072 21425096 -50728786 - MER63A DNA MER1_type -1655 33 10 21 0 0 0 chr20 21425312 21425333 -50728549 + AT_rich Low_complexity Low_complexity 1 21 0 186 243 291 10 chr20 21425715 21425818 -50728064 + L3 LINE CR1 21 152 -1425 482 317 170 13 chr20 21426220 21426444 -50727438 + MIR SINE MIR 4 262 0 1292 221 37 3 chr20 21426478 21426776 -50727106 - LTR16C LTR ERVL -1 490 183 2779 128 58 5 chr20 21427497 21427927 -50725955 - LTR35 LTR ERV1 -2 616 164 404 184 26 26 chr20 21427934 21427986 -50725896 + AluJ/FLAM SINE Alu 1 52 -250 3454 165 2 4 chr20 21427986 21428530 -50725352 + MER41D LTR ERV1 1 543 -14 1057 207 25 42 chr20 21428530 21428767 -50725115 - THE1C LTR MaLR 0 375 143 365 278 0 0 chr20 21478903 21478993 -50674889 - L1MC4 LINE L1 -1339 6703 6614 232 254 35 26 chr20 21479130 21479244 -50674638 + L1M4 LINE L1 3343 3457 -2689 307 315 44 10 chr20 21479444 21479647 -50674235 + L1M4 LINE L1 3672 3881 -2265 490 347 80 19 chr20 21479660 21480086 -50673796 + L1M4 LINE L1 3923 4374 -1772 1919 138 47 7 chr20 21480139 21480437 -50673445 + AluJo SINE Alu 1 310 -2 2119 138 0 0 chr20 21480493 21480804 -50673078 + AluSx SINE Alu 1 311 -1 468 239 97 61 chr20 21480817 21481293 -50672589 + L1M4 LINE L1 4507 4999 -1147 1901 148 19 13 chr20 21481343 21481653 -50672229 + AluJo SINE Alu 1 312 0 188 57 0 57 chr20 21481671 21481706 -50672176 + (TCTA)n Simple_repeat Simple_repeat 3 35 0 28 0 0 0 chr20 21481865 21481893 -50671989 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr20 21484359 21484388 -50669494 + (CAA)n Simple_repeat Simple_repeat 2 30 0 295 288 101 36 chr20 21484546 21484685 -50669197 - MIR3 SINE MIR -21 187 40 2018 106 82 64 chr20 21484686 21485016 -50668866 + MER1B DNA MER1_type 1 336 -1 203 289 13 53 chr20 21485614 21485690 -50668192 + L2 LINE L2 3180 3252 -20 2157 119 0 3 chr20 21486339 21486641 -50667241 + AluY SINE Alu 1 301 -10 2203 109 0 10 chr20 21487038 21487340 -50666542 - AluSg SINE Alu -9 301 3 2380 74 7 10 chr20 21487368 21487678 -50666204 + AluSg SINE Alu 1 309 -1 820 209 79 23 chr20 21488249 21488426 -50665456 + MLT1J LTR MaLR 1 187 -324 356 123 0 15 chr20 21488470 21488535 -50665347 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 1411 108 46 0 chr20 21488558 21488753 -50665129 - AluSx SINE Alu -98 214 11 1238 164 0 23 chr20 21488811 21489030 -50664852 + AluJo SINE Alu 90 303 -9 1674 163 51 10 chr20 21489173 21489290 -50664592 + AluJb SINE Alu 1 112 -200 285 89 0 0 chr20 21489290 21489335 -50664547 + (CA)n Simple_repeat Simple_repeat 2 46 0 1674 163 51 10 chr20 21489335 21489511 -50664371 + AluJb SINE Alu 112 306 -6 2265 116 0 0 chr20 21489708 21490010 -50663872 - AluSx SINE Alu -9 303 2 254 87 348 0 chr20 21490011 21490057 -50663825 - L1ME2 LINE L1 -34 6130 6069 728 88 0 0 chr20 21490057 21490148 -50663734 - AluSg/x SINE Alu -15 294 204 417 245 31 50 chr20 21490148 21490307 -50663575 - L1ME2 LINE L1 -82 6082 5927 638 282 97 26 chr20 21490359 21490710 -50663172 + L1ME4a LINE L1 5531 5906 -215 2433 92 0 0 chr20 21490958 21491263 -50662619 + AluSx SINE Alu 1 305 -7 2158 149 24 35 chr20 21491569 21491786 -50662096 - MLT1A1 LTR MaLR 0 365 152 2186 108 0 0 chr20 21491786 21492074 -50661808 - AluSg1 SINE Alu -21 288 1 2158 149 24 35 chr20 21492074 21492225 -50661657 - MLT1A1 LTR MaLR -213 152 1 244 245 75 0 chr20 21492401 21492454 -50661428 - L2 LINE L2 -1 3312 3256 204 344 0 0 chr20 21492636 21492697 -50661185 + MER5A DNA MER1_type 122 182 -7 2329 83 3 7 chr20 21492700 21493000 -50660882 + AluSp SINE Alu 1 299 -14 721 230 67 0 chr20 21493605 21493770 -50660112 + MER5A DNA MER1_type 14 189 0 361 243 16 65 chr20 21494576 21494761 -50659121 + CT-rich Low_complexity Low_complexity 3 178 0 * 462 272 0 43 chr20 21494623 21494807 -50659075 + C-rich Low_complexity Low_complexity 5 180 0 21 71 0 0 chr20 21496653 21496695 -50657187 + AT_rich Low_complexity Low_complexity 1 42 0 182 261 23 68 chr20 21497782 21497870 -50656012 - MIR SINE MIR -83 179 96 394 191 0 0 chr20 21498085 21498153 -50655729 - MER92C LTR ERV1 -2 552 485 * 627 216 36 22 chr20 21498141 21498280 -50655602 - MER92B LTR ERV1 -486 150 10 380 242 135 55 chr20 21498475 21498915 -50654967 - L1ME2 LINE L1 -328 5842 5366 21 0 0 0 chr20 21499018 21499039 -50654843 + AT_rich Low_complexity Low_complexity 1 21 0 1566 199 3 14 chr20 21499040 21499337 -50654545 + AluJo SINE Alu 1 294 -18 341 135 40 27 chr20 21499627 21499701 -50654181 + L1MC2 LINE L1 6256 6330 -14 1400 77 0 0 chr20 21499701 21499870 -50654012 + AluSg/x SINE Alu 134 302 -8 1485 166 119 11 chr20 21499917 21500262 -50653620 - AluJo SINE Alu 0 380 6 904 172 11 28 chr20 21500587 21500767 -50653115 - AluJb SINE Alu -14 298 122 27 0 0 0 chr20 21500793 21500820 -50653062 + AT_rich Low_complexity Low_complexity 1 27 0 928 106 0 8 chr20 21500827 21500950 -50652932 - AluJb SINE Alu -190 122 1 421 164 0 0 chr20 21501402 21501469 -50652413 - 7SK RNA RNA -6 187 121 824 118 0 16 chr20 21501505 21501632 -50652250 - 7SK RNA RNA -68 125 1 1784 136 139 0 chr20 21502039 21502356 -50651526 + MER46B DNA MER2_type 1 236 0 1538 106 10 0 chr20 21502493 21502701 -50651181 + AluSp SINE Alu 86 295 -18 274 237 0 0 chr20 21502746 21502805 -50651077 - Charlie5 DNA MER1_type -27 2585 2527 1072 134 93 0 chr20 21502843 21503037 -50650845 - Charlie5 DNA MER1_type -152 2460 2249 665 126 54 9 chr20 21503052 21503163 -50650719 - Charlie5 DNA MER1_type -2489 123 8 2176 116 3 3 chr20 21503801 21504104 -50649778 + AluSp SINE Alu 1 303 -10 628 221 80 80 chr20 21504215 21504415 -50649467 + MIR SINE MIR 18 220 -42 1595 176 0 40 chr20 21504415 21504716 -50649166 + AluJo SINE Alu 1 289 -23 628 221 80 80 chr20 21504716 21504741 -50649141 + MIR SINE MIR 219 243 -19 897 281 117 69 chr20 21505404 21505588 -50648294 - L2 LINE L2 -2 3311 3137 2404 77 3 3 chr20 21505588 21505886 -50647996 + AluSq SINE Alu 1 298 -15 897 281 117 69 chr20 21505886 21506321 -50647561 - L2 LINE L2 -176 3137 2622 1638 179 7 14 chr20 21506321 21506617 -50647265 + AluJo SINE Alu 1 294 -18 897 281 117 69 chr20 21506617 21506838 -50647044 - L2 LINE L2 -691 2622 2413 483 260 46 73 chr20 21507086 21507200 -50646682 - L2 LINE L2 -2 3311 3204 2207 100 3 10 chr20 21507200 21507501 -50646381 - AluSg SINE Alu -11 299 1 483 260 46 73 chr20 21507501 21507605 -50646277 - L2 LINE L2 -109 3204 3099 4568 172 42 34 chr20 21507693 21508854 -50645028 + L1MB7 LINE L1 4860 6022 -162 1802 176 16 10 chr20 21508854 21509161 -50644721 - AluJb SINE Alu -3 309 1 4568 172 42 34 chr20 21509161 21509303 -50644579 + L1MB7 LINE L1 6022 6161 -23 2499 60 0 7 chr20 21509491 21509791 -50644091 + AluSp SINE Alu 2 299 -14 439 314 19 19 chr20 21509906 21510116 -50643766 - L1ME4a LINE L1 -196 5925 5716 471 180 0 81 chr20 21510119 21510230 -50643652 - L1ME4a LINE L1 -457 5664 5563 796 182 198 88 chr20 21510682 21511045 -50642837 - L1ME1 LINE L1 -79 6087 5790 180 97 0 0 chr20 21511064 21511095 -50642787 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 303 191 53 96 chr20 21511102 21511196 -50642686 - LTR9B LTR ERV1 -89 555 466 654 133 275 0 chr20 21511333 21511453 -50642429 + Tigger1 DNA MER2_type 2266 2418 0 348 240 20 20 chr20 21511940 21512040 -50641842 - MIR SINE MIR -91 171 72 23 0 0 0 chr20 21512322 21512345 -50641537 + AT_rich Low_complexity Low_complexity 1 23 0 998 145 26 0 chr20 21512400 21512552 -50641330 - AluJb SINE Alu -23 289 134 473 252 43 0 chr20 21512982 21513097 -50640785 - MER3 DNA MER1_type -60 149 30 * 1698 125 66 7 chr20 21513087 21513375 -50640507 + MER4C LTR ERV1 161 465 0 1287 137 31 9 chr20 21513375 21513601 -50640281 + MER4D LTR ERV1 609 839 -33 2479 51 0 10 chr20 21513622 21513914 -50639968 + AluY SINE Alu 1 289 -22 271 150 0 0 chr20 21513915 21513955 -50639927 - MER3 DNA MER1_type -167 42 3 365 241 142 14 chr20 21514068 21514209 -50639673 - HAL1 LINE L1 -2017 490 332 2035 116 28 0 chr20 21514342 21514627 -50639255 - AluSx SINE Alu -19 293 1 26 0 0 0 chr20 21514999 21515025 -50638857 + AT_rich Low_complexity Low_complexity 1 26 0 2007 121 4 7 chr20 21515947 21516228 -50637654 + AluJo SINE Alu 1 280 -32 395 160 120 88 chr20 21516441 21516566 -50637316 + Charlie4 DNA MER1_type 1818 1946 -15 327 267 276 0 chr20 21516721 21516837 -50637045 + MER5A DNA MER1_type 42 189 0 324 265 61 31 chr20 21516837 21516935 -50636947 - MIR3 SINE MIR -48 160 60 2172 121 0 13 chr20 21517266 21517571 -50636311 + AluJb SINE Alu 1 301 -11 210 346 82 30 chr20 21517886 21518155 -50635727 + L2 LINE L2 2466 2748 -566 209 296 56 0 chr20 21518507 21518561 -50635321 - L2 LINE L2 -63 3209 3153 356 290 147 31 chr20 21518689 21518919 -50634963 - L2 LINE L2 -224 3048 2763 1773 164 3 11 chr20 21518919 21519242 -50634640 + AluJo SINE Alu 1 321 0 356 290 147 31 chr20 21519242 21519312 -50634570 - L2 LINE L2 -509 2763 2703 313 226 48 12 chr20 21519377 21519461 -50634421 - MLT1J2 LTR MaLR -21 429 343 21 82 0 0 chr20 21519535 21519584 -50634298 + AT_rich Low_complexity Low_complexity 1 49 0 389 213 33 109 chr20 21519634 21519817 -50634065 - MLT1J2 LTR MaLR -274 176 8 365 310 240 21 chr20 21519829 21520216 -50633666 - L2 LINE L2 -679 2635 2164 257 335 126 6 chr20 21520427 21520594 -50633288 + L2 LINE L2 1386 1572 -1742 753 132 0 0 chr20 21520651 21520757 -50633125 + AluSp/q SINE Alu 193 298 -15 586 249 254 0 chr20 21520761 21520938 -50632944 + MIR SINE MIR 31 252 -10 240 319 112 12 chr20 21521184 21521353 -50632529 + L2 LINE L2 1912 2097 -1217 677 199 20 20 chr20 21522587 21522738 -50631144 - L1PB4 LINE L1 0 6156 6006 265 181 113 0 chr20 21522740 21522810 -50631072 - L1PA12 LINE L1 -187 5978 5901 4695 158 39 30 chr20 21522813 21523784 -50630098 - L1MB7 LINE L1 -9 6175 5191 598 229 25 0 chr20 21523899 21524017 -50629865 - FLAM_C SINE Alu -12 121 1 1370 138 36 20 chr20 21524051 21524270 -50629612 + L1MB8 LINE L1 5603 5828 -350 781 268 0 0 chr20 21524270 21524427 -50629455 + FAM SINE Alu 2 158 -17 1370 138 36 20 chr20 21524427 21524460 -50629422 + L1MB8 LINE L1 5828 5859 -319 1062 180 82 16 chr20 21526632 21526826 -50627056 - MER3 DNA MER1_type -1 208 2 383 326 15 38 chr20 21527396 21527528 -50626354 - L2 LINE L2 -18 3254 3126 2134 95 31 17 chr20 21527868 21528162 -50625720 + AluSc SINE Alu 2 299 -10 1084 186 5 15 chr20 21528424 21528623 -50625259 + MER6B DNA MER2_type 14 210 0 233 202 29 106 chr20 21529158 21529262 -50624620 + L1MC4 LINE L1 7918 8013 -29 307 225 96 20 chr20 21530379 21530484 -50623398 + MIR3 SINE MIR 44 156 -52 2295 89 3 20 chr20 21530943 21531245 -50622637 + AluSq SINE Alu 1 297 -16 852 259 65 60 chr20 21531665 21532062 -50621820 - L1ME3A LINE L1 -1 6169 5771 1773 143 49 7 chr20 21533470 21533756 -50620126 + AluJo SINE Alu 1 298 -14 22 70 0 0 chr20 21533833 21533876 -50620006 + AT_rich Low_complexity Low_complexity 1 43 0 1186 102 161 5 chr20 21533970 21534175 -50619707 + MER7A DNA MER2_type 39 273 -73 904 195 0 0 chr20 21534333 21534492 -50619390 - FRAM SINE Alu -19 157 1 240 254 48 0 chr20 21534787 21534850 -50619032 + MER5A DNA MER1_type 117 182 -7 406 283 131 7 chr20 21535445 21535590 -50618292 - MIR3 SINE MIR -29 179 17 363 228 33 0 chr20 21542920 21543012 -50610870 - Charlie8 DNA MER1_type -2296 121 27 1136 208 19 0 chr20 21544125 21544341 -50609541 - AluJo SINE Alu -92 220 1 226 290 89 48 chr20 21548223 21548347 -50605535 + MIR3 SINE MIR 74 202 -6 2076 122 0 0 chr20 21548772 21549067 -50604815 + AluSx SINE Alu 1 295 -17 285 267 60 0 chr20 21550344 21550460 -50603422 + MLT1K LTR MaLR 151 273 -315 346 286 131 50 chr20 21553168 21553465 -50600417 + L2 LINE L2 2053 2373 -941 406 270 101 0 chr20 21553973 21554121 -50599761 + MER58B DNA MER1_type 171 333 -8 260 232 158 0 chr20 21554124 21554219 -50599663 + MER58B DNA MER1_type 220 329 -12 444 122 14 0 chr20 21555555 21555629 -50598253 + MER116 DNA Mariner 1 75 -5 573 288 123 28 chr20 21557083 21557295 -50596587 - MIR SINE MIR -17 245 14 845 307 17 8 chr20 21558160 21558401 -50595481 + MIR SINE MIR 20 262 0 237 324 122 22 chr20 21563010 21563149 -50590733 - MIR SINE MIR -63 199 47 2348 81 3 3 chr20 21564734 21565043 -50588839 + AluSp SINE Alu 1 309 -4 1392 207 24 54 chr20 21569793 21570127 -50583755 + MER33 DNA MER1_type 1 324 0 319 311 34 62 chr20 21571292 21571501 -50582381 - Charlie8 DNA MER1_type -2199 218 16 812 278 74 0 chr20 21571513 21571743 -50582139 + MIR SINE MIR 2 248 -14 196 304 130 43 chr20 21574461 21574576 -50579306 + MIR SINE MIR 64 188 -74 268 267 35 0 chr20 21575298 21575384 -50578498 - L1ME4a LINE L1 -34 6087 5999 461 297 167 7 chr20 21576418 21576718 -50577164 + L1ME4a LINE L1 5547 5894 -227 1021 194 24 29 chr20 21577319 21577525 -50576357 + MER3 DNA MER1_type 5 209 0 2329 90 7 0 chr20 21578676 21578977 -50574905 + AluSx SINE Alu 1 303 -9 604 141 148 39 chr20 21580310 21580438 -50573444 - FLAM_C SINE Alu -1 142 1 316 328 104 0 chr20 21580771 21580896 -50572986 - L1ME4a LINE L1 -448 5673 5536 24 32 0 0 chr20 21580896 21580927 -50572955 + AT_rich Low_complexity Low_complexity 1 31 0 443 221 57 64 chr20 21581018 21581158 -50572724 + MER5A DNA MER1_type 16 154 -35 465 122 61 0 chr20 21582676 21582774 -50571108 + GA-rich Low_complexity Low_complexity 2 105 0 357 189 18 140 chr20 21583474 21583638 -50570244 + MLT1H LTR MaLR 406 549 0 239 295 0 0 chr20 21585396 21585457 -50568425 + CT-rich Low_complexity Low_complexity 3 63 0 252 278 165 38 chr20 21586025 21586237 -50567645 - Charlie8 DNA MER1_type -2141 276 38 2536 52 0 19 chr20 21587102 21587412 -50566470 + AluY SINE Alu 1 304 -7 812 169 0 22 chr20 21588015 21588151 -50565731 + FLAM_C SINE Alu 1 133 0 2623 173 89 2 chr20 21589061 21589565 -50564317 - MER44D DNA MER2_type 0 605 3 346 290 13 77 chr20 21590069 21590224 -50563658 - L1MC4 LINE L1 -4 8021 5918 1603 114 0 5 chr20 21590491 21590710 -50563172 - AluSg/x SINE Alu -10 300 83 371 333 141 16 chr20 21590931 21591186 -50562696 - L1MC4 LINE L1 -1096 5033 4747 467 311 104 48 chr20 21591211 21591347 -50562535 - L1MC4 LINE L1 -1534 4595 4468 785 183 8 0 chr20 21591347 21591478 -50562404 + FLAM_A SINE Alu 1 132 -1 467 311 104 48 chr20 21591478 21592375 -50561507 - L1MC4 LINE L1 -1661 4468 3494 321 282 77 12 chr20 21592491 21592661 -50561221 - L1MC4 LINE L1 -3006 3123 2943 325 282 116 38 chr20 21592891 21593355 -50560527 - L1MC4 LINE L1 -4500 1639 1121 326 296 56 31 chr20 21593456 21593652 -50560230 - L1MC4 LINE L1 -5357 762 562 419 308 68 56 chr20 21593673 21594085 -50559797 - L1MC4 LINE L1 -5643 476 60 922 299 152 21 chr20 21594787 21595532 -50558350 - L1M4 LINE L1 -1699 4447 3606 500 301 92 0 chr20 21595993 21596275 -50557607 - L1MEd LINE L1 -4917 1202 895 1734 242 113 15 chr20 21597677 21598263 -50555619 + L1ME3A LINE L1 5528 6170 0 2368 93 3 0 chr20 21598529 21598829 -50555053 - AluSx SINE Alu -11 301 1 2137 73 28 10 chr20 21599603 21599891 -50553991 + AluY SINE Alu 1 293 -18 764 255 210 30 chr20 21600475 21601047 -50552835 - L2 LINE L2 -1 3312 2558 1645 201 10 7 chr20 21601047 21601346 -50552536 + AluJb SINE Alu 1 300 -12 764 255 210 30 chr20 21601346 21601565 -50552317 - L2 LINE L2 -755 2558 2380 287 177 32 32 chr20 21601522 21601584 -50552298 - MIR SINE MIR -64 144 83 * 234 284 168 13 chr20 21601713 21601868 -50552014 - MER102a DNA MER1_type -31 299 121 2026 156 10 0 chr20 21601868 21602169 -50551713 - AluJb SINE Alu -8 304 1 2431 103 3 0 chr20 21602679 21602991 -50550891 + AluSq SINE Alu 1 313 0 299 213 0 0 chr20 21603623 21603684 -50550198 + MER116 DNA Mariner 19 79 -1 820 182 155 0 chr20 21603746 21603927 -50549955 + MER3 DNA MER1_type 1 209 0 213 200 153 35 chr20 21604445 21604530 -50549352 - L2 LINE L2 -12 3301 3207 199 344 102 8 chr20 21605730 21605858 -50548024 - MIR SINE MIR -88 174 35 21 0 0 0 chr20 21606211 21606232 -50547650 + GC_rich Low_complexity Low_complexity 1 21 0 37 39 0 0 chr20 21606314 21606365 -50547517 + GC_rich Low_complexity Low_complexity 1 51 0 31 96 0 0 chr20 21606526 21606620 -50547262 + GC_rich Low_complexity Low_complexity 1 94 0 180 0 0 0 chr20 21606757 21606777 -50547105 + (CCCCG)n Simple_repeat Simple_repeat 3 22 0 38 39 0 0 chr20 21607001 21607053 -50546829 + GC_rich Low_complexity Low_complexity 1 52 0 206 147 59 29 chr20 21607070 21607138 -50546744 + (CCCGG)n Simple_repeat Simple_repeat 4 73 0 277 228 40 20 chr20 21607564 21607665 -50546217 + (CGGGG)n Simple_repeat Simple_repeat 2 104 0 276 30 0 0 chr20 21608911 21608944 -50544938 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 186 309 75 43 chr20 21609048 21609142 -50544740 + L2 LINE L2 3211 3307 -6 539 268 66 5 chr20 21609157 21609370 -50544512 - LTR16C LTR ERVL -98 393 168 263 227 187 0 chr20 21610261 21610336 -50543546 + FRAM/FAM SINE Alu 1 86 -80 552 140 0 0 chr20 21610341 21610434 -50543448 + (GGAGAA)n Simple_repeat Simple_repeat 5 97 0 392 217 124 31 chr20 21610574 21610703 -50543179 + L1ME1 LINE L1 6021 6161 -5 716 239 36 9 chr20 21610976 21611192 -50542690 - MIR SINE MIR -1 261 39 294 303 82 81 chr20 21611342 21611864 -50542018 - L2 LINE L2 -662 2652 2130 464 200 64 71 chr20 21611896 21612036 -50541846 - MLT1H LTR MaLR 0 549 404 315 312 114 30 chr20 21612278 21612541 -50541341 - L2 LINE L2 -1223 2091 1807 1022 287 76 40 chr20 21612551 21613234 -50540648 - L2 LINE L2 0 3313 2593 2065 174 42 28 chr20 21613235 21613661 -50540221 + MER63B DNA MER1_type 4 435 -1 273 98 0 0 chr20 21613691 21613732 -50540150 + (TG)n Simple_repeat Simple_repeat 1 41 0 1239 260 178 5 chr20 21613953 21614364 -50539518 - LTR16C LTR ERVL -9 482 1 2152 142 0 3 chr20 21614466 21614776 -50539106 + AluSx SINE Alu 1 309 -3 250 298 152 39 chr20 21615157 21615335 -50538547 - MIR SINE MIR 0 262 65 192 355 65 7 chr20 21615720 21615858 -50538024 - L3 LINE CR1 0 1577 1432 455 328 8 0 chr20 21615908 21616033 -50537849 - L2 LINE L2 0 3313 3188 254 287 55 152 chr20 21616789 21617078 -50536804 - L3b LINE CR1 -197 1386 1126 21 0 0 0 chr20 21617150 21617171 -50536711 + AT_rich Low_complexity Low_complexity 1 21 0 237 33 0 0 chr20 21617512 21617542 -50536340 + (TG)n Simple_repeat Simple_repeat 1 30 0 1951 159 10 0 chr20 21617742 21618038 -50535844 - AluSx SINE Alu -13 299 1 340 222 125 21 chr20 21618112 21618256 -50535626 - L1ME4a LINE L1 0 6121 5963 766 286 172 15 chr20 21619214 21619626 -50534256 - L2 LINE L2 -1 3312 2836 2028 156 0 9 chr20 21619728 21620043 -50533839 - AluJb SINE Alu 0 312 1 346 266 65 41 chr20 21620078 21620224 -50533658 - MIR3 SINE MIR -45 163 11 1775 135 54 24 chr20 21620294 21620591 -50533291 + AluJb SINE Alu 1 306 -6 240 235 25 25 chr20 21620624 21620705 -50533177 - L1ME4a LINE L1 -73 6048 5968 180 0 0 0 chr20 21620723 21620743 -50533139 + (TG)n Simple_repeat Simple_repeat 2 21 0 1820 212 33 29 chr20 21620800 21621285 -50532597 - L1ME2 LINE L1 -9 6155 5669 835 193 0 0 chr20 21621286 21621426 -50532456 - FLAM_C SINE Alu -3 140 1 1236 168 99 8 chr20 21621431 21621693 -50532189 - L1ME2 LINE L1 -494 5670 5385 279 79 0 0 chr20 21622068 21622106 -50531776 + (ATG)n Simple_repeat Simple_repeat 1 38 0 1537 236 69 22 chr20 21622694 21622863 -50531019 - LTR16C LTR ERVL -1 490 331 2121 172 63 29 chr20 21622863 21623044 -50530838 + MSTB LTR MaLR 1 174 -252 2293 114 0 9 chr20 21623044 21623359 -50530523 + AluSq SINE Alu 1 312 -1 2121 172 63 29 chr20 21623359 21623589 -50530293 + MSTB LTR MaLR 174 426 0 1537 236 69 22 chr20 21623589 21623880 -50530002 - LTR16C LTR ERVL -160 331 8 1001 215 0 11 chr20 21624078 21624264 -50529618 + MER5A DNA MER1_type 6 189 0 185 240 80 0 chr20 21626519 21626569 -50527313 + L3 LINE CR1 1077 1130 -447 378 300 147 18 chr20 21626590 21626760 -50527122 + L3 LINE CR1 1383 1574 -3 208 302 151 0 chr20 21626846 21626952 -50526930 - MIR3 SINE MIR -23 185 64 311 326 97 41 chr20 21627060 21627256 -50526626 - MIR SINE MIR -6 256 50 528 256 98 0 chr20 21627916 21628080 -50525802 + MER3 DNA MER1_type 10 189 -20 392 328 175 19 chr20 21628097 21628515 -50525367 + L2 LINE L2 2809 3291 -22 385 270 137 19 chr20 21628598 21628859 -50525023 - MLT1H1 LTR MaLR -16 539 231 2155 99 23 20 chr20 21628862 21629164 -50524718 - AluSx SINE Alu -9 303 1 361 221 157 21 chr20 21629164 21629304 -50524578 - MLT1H1 LTR MaLR -309 240 82 435 289 208 0 chr20 21629373 21629522 -50524360 - MER5A DNA MER1_type -1 188 9 762 262 177 14 chr20 21629823 21630190 -50523692 - MLT1K LTR MaLR -11 577 151 343 313 36 0 chr20 21630267 21630379 -50523503 - MLT1K LTR MaLR -412 176 61 283 222 0 0 chr20 21630709 21630763 -50523119 + MER103 DNA DNA 64 117 -49 408 234 96 0 chr20 21630816 21630910 -50522972 - MIR SINE MIR -59 149 47 612 279 45 25 chr20 21631557 21631758 -50522124 + MIR SINE MIR 50 254 -8 2255 68 24 24 chr20 21632223 21632517 -50521365 + AluY SINE Alu 1 294 -17 2207 123 0 0 chr20 21632709 21633001 -50520881 - AluSq SINE Alu -21 292 1 1916 144 9 75 chr20 21633041 21633374 -50520508 + AluSx SINE Alu 1 311 -1 535 246 21 14 chr20 21633493 21633635 -50520247 + Charlie8 DNA MER1_type 49 191 -2226 331 240 64 40 chr20 21634866 21634991 -50518891 + MIR SINE MIR 120 247 -15 582 272 108 15 chr20 21635047 21635315 -50518567 - LTR16C LTR ERVL -48 443 151 336 315 140 20 chr20 21635425 21635625 -50518257 + MIR SINE MIR 20 243 -19 878 185 11 11 chr20 21636076 21636260 -50517622 - MER53 DNA DNA -5 184 1 763 208 158 67 chr20 21636570 21636988 -50516894 - LTR16A1 LTR ERVL 0 457 2 2038 173 70 70 chr20 21637913 21638087 -50515795 + L1MB2 LINE L1 5640 5812 -359 1658 143 37 37 chr20 21638087 21638381 -50515501 + AluJo SINE Alu 1 294 -18 2038 173 70 70 chr20 21638381 21638672 -50515210 + L1MB2 LINE L1 5812 6124 -47 1898 143 0 14 chr20 21638672 21638989 -50514893 + AluJo SINE Alu 3 315 0 2038 173 70 70 chr20 21638989 21639036 -50514846 + L1MB2 LINE L1 6124 6169 -2 2080 120 36 10 chr20 21639047 21639348 -50514534 + AluSx SINE Alu 3 311 -1 1238 232 36 42 chr20 21639743 21640079 -50513803 - MER46C DNA MER2_type -4 334 1 195 284 45 23 chr20 21640181 21640269 -50513613 - MIR SINE MIR -95 113 24 214 227 0 61 chr20 21640474 21640540 -50513342 + L2 LINE L2 3211 3272 0 208 339 0 0 chr20 21640802 21640864 -50513018 + L2 LINE L2 3252 3313 0 806 274 48 34 chr20 21640886 21641178 -50512704 - MLT1K LTR MaLR -3 585 290 1199 158 81 5 chr20 21641451 21641660 -50512222 - AluJb SINE Alu -1 311 87 1764 149 80 3 chr20 21641703 21641991 -50511891 + AluSx SINE Alu 1 310 -2 720 134 0 25 chr20 21642018 21642137 -50511745 - FLAM_C SINE Alu -26 117 2 1865 109 109 7 chr20 21643320 21643596 -50510286 - AluSg SINE Alu -6 304 1 2262 97 0 23 chr20 21644252 21644551 -50509331 - AluSq SINE Alu -19 294 3 249 290 14 0 chr20 21644565 21644634 -50509248 + MIR3 SINE MIR 91 160 -48 662 181 19 151 chr20 21644723 21644928 -50508954 + MER5B DNA MER1_type 1 178 0 180 135 54 0 chr20 21645048 21645085 -50508797 + L2 LINE L2 3270 3308 -5 885 277 102 11 chr20 21645377 21645731 -50508151 + MER113 DNA MER1_type? 61 446 -75 680 283 45 18 chr20 21646356 21646579 -50507303 + MIR SINE MIR 18 246 -16 1352 283 31 5 chr20 21646770 21647162 -50506720 - L1MC4a LINE L1 -1873 5935 5534 1158 192 121 42 chr20 21647170 21647243 -50506639 - Charlie4a DNA MER1_type -1502 459 393 1950 204 17 0 chr20 21647243 21647600 -50506282 - MLT1A1 LTR MaLR -2 363 1 1158 192 121 42 chr20 21647600 21647907 -50505975 - Charlie4a DNA MER1_type -1568 393 49 22 35 0 0 chr20 21648219 21648248 -50505634 + AT_rich Low_complexity Low_complexity 1 29 0 2013 116 34 17 chr20 21648418 21648712 -50505170 + AluSx SINE Alu 1 299 -13 2448 75 3 13 chr20 21648712 21649020 -50504862 + AluY SINE Alu 6 310 -1 313 211 0 26 chr20 21650166 21650242 -50503640 - MER91A DNA MER1_type -122 74 1 1016 209 47 5 chr20 21650828 21651043 -50502839 - MER58A DNA MER1_type 0 224 1 210 235 62 25 chr20 21651128 21651209 -50502673 - MIR SINE MIR -57 205 122 405 290 121 0 chr20 21654635 21654759 -50499123 + L2 LINE L2 3134 3272 0 227 312 65 40 chr20 21654789 21654988 -50498894 + L1ME3 LINE L1 244 447 -5672 203 302 62 42 chr20 21656208 21656304 -50497578 - MIR SINE MIR -108 154 57 38653 77 19 7 chr20 21657151 21663218 -50490664 + L1PA6 LINE L1 11 6151 -3 420 233 67 83 chr20 21663778 21663971 -50489911 + L1MC5 LINE L1 7740 7929 -32 783 226 59 0 chr20 21664160 21664346 -50489536 - MIR SINE MIR -18 244 48 327 274 88 0 chr20 21666832 21666945 -50486937 + MIR SINE MIR 120 242 -20 294 73 0 0 chr20 21667842 21667883 -50485999 + (A)n Simple_repeat Simple_repeat 1 41 0 277 274 53 9 chr20 21668247 21668360 -50485522 + L1ME3 LINE L1 3990 4107 -2022 433 287 62 3 chr20 21668372 21668661 -50485221 + L1ME3 LINE L1 4386 4691 -1438 223 250 0 0 chr20 21668661 21668713 -50485169 + GA-rich Low_complexity Low_complexity 1 52 0 402 260 117 38 chr20 21668755 21669097 -50484785 + L1ME3 LINE L1 4708 5076 -1053 2649 165 43 10 chr20 21669107 21669593 -50484289 - MER4E LTR ERV1 -28 748 252 514 267 83 27 chr20 21669600 21670306 -50483576 + L1ME3 LINE L1 5069 5871 -282 2389 82 0 0 chr20 21670532 21670825 -50483057 - AluSg SINE Alu -17 293 1 1863 140 46 7 chr20 21670825 21671110 -50482772 - AluSx SINE Alu -16 296 1 24 67 0 0 chr20 21671221 21671266 -50482616 + AT_rich Low_complexity Low_complexity 1 45 0 917 256 114 48 chr20 21671621 21672042 -50481840 - MLT1J2 LTR MaLR 0 450 2 2091 115 55 30 chr20 21672102 21672466 -50481416 + THE1C LTR MaLR 1 373 -2 1594 208 51 58 chr20 21672531 21672998 -50480884 - MLT2C2 LTR ERVL 0 464 1 664 227 148 10 chr20 21673042 21673245 -50480637 + MIR SINE MIR 11 241 -21 1033 235 113 88 chr20 21673615 21674023 -50479859 - MLT1H LTR MaLR -17 532 115 1979 131 7 3 chr20 21674765 21675062 -50478820 + AluJb SINE Alu 15 312 0 816 219 91 30 chr20 21675723 21675988 -50477894 - L1ME3A LINE L1 -1 6169 5889 216 86 0 0 chr20 21676257 21676292 -50477590 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 839 257 130 17 chr20 21677074 21677436 -50476446 - LTR16C LTR ERVL 0 491 89 358 226 19 0 chr20 21679820 21679926 -50473956 + CT-rich Low_complexity Low_complexity 1 108 0 634 160 11 27 chr20 21679940 21680294 -50473588 + CT-rich Low_complexity Low_complexity 1 348 0 22 35 0 0 chr20 21680944 21680973 -50472909 + AT_rich Low_complexity Low_complexity 1 29 0 268 349 24 48 chr20 21681263 21681472 -50472410 - L2 LINE L2 -4 3309 3106 423 299 206 16 chr20 21683012 21683396 -50470486 - LTR16B LTR ERVL 0 464 8 671 235 24 0 chr20 21683713 21683879 -50470003 - MLT1G LTR MaLR 0 590 421 22 0 0 0 chr20 21684255 21684277 -50469605 + AT_rich Low_complexity Low_complexity 1 22 0 1187 252 77 19 chr20 21684630 21685047 -50468835 + LTR16A1 LTR ERVL 4 444 -13 1796 152 50 0 chr20 21685173 21685456 -50468426 - AluJb SINE Alu -15 297 1 293 200 14 14 chr20 21685716 21685786 -50468096 - LTR37B LTR ERV1 -258 210 141 246 330 0 0 chr20 21685813 21685901 -50467981 + MER58A DNA MER1_type 1 88 -19 225 325 111 17 chr20 21686097 21686214 -50467668 + MIR SINE MIR 16 143 -65 2232 118 0 3 chr20 21686618 21686914 -50466968 + AluSq SINE Alu 6 300 -13 2148 124 71 42 chr20 21687510 21687864 -50466018 - THE1B LTR MaLR 0 364 1 1898 124 17 75 chr20 21687874 21688221 -50465661 + MLT1C LTR MaLR 1 327 -140 386 162 15 0 chr20 21688328 21688396 -50465486 + MLT1C LTR MaLR 372 440 -27 393 231 179 17 chr20 21688747 21688864 -50465018 - MER63 DNA MER1_type -73 763 2 1120 260 94 44 chr20 21690624 21691058 -50462824 - LTR16C LTR ERVL 0 491 36 633 176 9 9 chr20 21691959 21692067 -50461815 - MER81 DNA DNA -4 110 3 350 328 99 0 chr20 21692474 21692605 -50461277 - MLT1I LTR MaLR -265 144 1 1753 142 0 72 chr20 21693005 21693337 -50460545 + AluSx SINE Alu 1 308 -4 378 275 103 63 chr20 21693384 21694095 -50459787 + L1ME4a LINE L1 5350 6099 -22 659 213 94 25 chr20 21694573 21694775 -50459107 - MER20 DNA MER1_type 0 219 4 1240 142 111 66 chr20 21694928 21695216 -50458666 - AluJo SINE Alu -1 301 1 276 235 211 24 chr20 21695334 21695500 -50458382 + LTR33A LTR ERVL 327 523 0 353 217 0 0 chr20 21695524 21695579 -50458303 + L1MC4 LINE L1 6636 6693 -1349 2110 89 14 0 chr20 21695579 21695860 -50458022 - AluSp SINE Alu -27 286 2 353 217 0 0 chr20 21695860 21695873 -50458009 + L1MC4 LINE L1 6692 6704 -1338 2478 42 7 3 chr20 21696052 21696362 -50457520 - AluY SINE Alu 0 311 1 327 283 40 0 chr20 21696405 21696504 -50457378 + MIR SINE MIR 159 261 -1 1172 186 3 114 chr20 21696640 21696946 -50456936 - MLT1A1 LTR MaLR -93 272 1 1413 246 120 39 chr20 21697279 21697787 -50456095 - MLT1H LTR MaLR 0 549 1 1816 98 148 0 chr20 21697950 21698214 -50455668 - AluSx SINE Alu -9 303 1 202 239 18 37 chr20 21699153 21699262 -50454620 + (TA)n Simple_repeat Simple_repeat 1 107 0 1976 117 27 3 chr20 21701998 21702296 -50451586 + AluSx SINE Alu 1 305 -7 189 300 0 33 chr20 21703436 21703496 -50450386 - MIR3 SINE MIR -23 185 128 961 258 118 7 chr20 21704246 21704573 -50449309 - LTR16A1 LTR ERVL -19 469 100 271 299 88 36 chr20 21704921 21705058 -50448824 + L3 LINE CR1 1223 1366 -211 408 184 101 9 chr20 21705145 21705254 -50448628 - L1ME3A LINE L1 -5 6165 6047 1778 246 86 0 chr20 21705286 21705717 -50448165 - L1ME3A LINE L1 -311 5859 5392 212 329 22 58 chr20 21705717 21705854 -50448028 - MER5A DNA MER1_type -33 156 25 560 199 146 82 chr20 21705971 21706238 -50447644 - MLT1J LTR MaLR -4 507 224 186 43 0 0 chr20 21706241 21706264 -50447618 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 231 114 0 0 chr20 21706264 21706299 -50447583 + (GA)n Simple_repeat Simple_repeat 2 36 0 523 262 39 52 chr20 21706310 21706543 -50447339 - MLT1J LTR MaLR -260 251 22 192 253 120 13 chr20 21706575 21706650 -50447232 + MIR3 SINE MIR 93 175 -33 467 271 80 20 chr20 21706881 21707032 -50446850 - MIR SINE MIR -26 236 77 344 269 50 25 chr20 21707395 21707514 -50446368 - MIR3 SINE MIR -5 203 82 1060 60 0 0 chr20 21707847 21707980 -50445902 + L1MA3 LINE L1 6173 6305 0 254 275 69 46 chr20 21708055 21708186 -50445696 - MER5A DNA MER1_type -6 183 50 * 274 272 35 26 chr20 21708073 21708187 -50445695 + MER5B DNA MER1_type 26 140 -38 463 156 100 0 chr20 21708274 21708364 -50445518 + MER5B DNA MER1_type 80 178 0 256 323 194 7 chr20 21708379 21708534 -50445348 - MER5A DNA MER1_type -5 184 1 215 317 154 0 chr20 21708623 21708727 -50445155 + L2 LINE L2 3136 3255 -17 28 0 0 0 chr20 21708876 21708904 -50444978 + AT_rich Low_complexity Low_complexity 1 28 0 1439 46 14 60 chr20 21709543 21709760 -50444122 - L1PA5 LINE L1 -1 6153 5947 486 247 72 6 chr20 21709939 21710105 -50443777 + MER112 DNA MER1_type 5 181 -79 724 210 19 25 chr20 21710126 21710288 -50443594 - MER5B DNA MER1_type 0 178 18 202 333 143 24 chr20 21710412 21710496 -50443386 - L2 LINE L2 -19 3253 3160 2095 230 77 13 chr20 21710506 21711115 -50442767 - L1ME3A LINE L1 -72 6098 5451 1779 153 4 4 chr20 21711698 21712003 -50441879 - AluJo SINE Alu 0 305 1 211 135 162 0 chr20 21712041 21712078 -50441804 + MER91B DNA MER1_type 22 64 -126 942 259 67 7 chr20 21712149 21712492 -50441390 - L1ME3A LINE L1 -76 6094 5734 183 314 0 0 chr20 21712635 21712686 -50441196 + MIR SINE MIR 103 153 -109 964 267 113 3 chr20 21712699 21713010 -50440872 - L1ME2 LINE L1 -9 6155 5811 1474 250 64 15 chr20 21713265 21713737 -50440145 - Charlie4a DNA MER1_type -6 502 8 240 262 196 0 chr20 21713749 21713856 -50440026 + MIR SINE MIR 124 251 -11 433 290 101 42 chr20 21715456 21715673 -50438209 - MIR SINE MIR -21 241 12 282 307 66 25 chr20 21715762 21715893 -50437989 - MIR SINE MIR -69 139 7 836 180 99 6 chr20 21716229 21716401 -50437481 + MER3 DNA MER1_type 18 205 -4 223 320 160 0 chr20 21717262 21717362 -50436520 - MIR3 SINE MIR -14 194 79 450 260 10 0 chr20 21717457 21717557 -50436325 + L2 LINE L2 3211 3311 -2 2156 100 0 0 chr20 21718604 21718893 -50434989 - AluSx SINE Alu -15 297 9 2200 92 3 0 chr20 21719122 21719425 -50434457 - AluSg SINE Alu -6 304 1 238 209 0 81 chr20 21719637 21719723 -50434159 - L1ME4a LINE L1 0 6121 6043 470 212 281 37 chr20 21720135 21720352 -50433530 + LTR16A1 LTR ERVL 4 273 -184 758 228 66 22 chr20 21721016 21721407 -50432475 - LTR16A1 LTR ERVL 0 457 3 860 220 0 41 chr20 21722342 21722560 -50431322 - MER3 DNA MER1_type 0 209 1 192 218 26 13 chr20 21722576 21722654 -50431228 + (TA)n Simple_repeat Simple_repeat 1 79 0 225 0 0 0 chr20 21723346 21723371 -50430511 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr20 21723401 21723422 -50430460 + AT_rich Low_complexity Low_complexity 1 21 0 180 291 13 63 chr20 21724340 21724419 -50429463 + L2 LINE L2 3198 3272 0 2440 55 7 0 chr20 21725552 21725859 -50428023 + AluY SINE Alu 1 309 -2 255 341 16 47 chr20 21725870 21725999 -50427883 - MIR SINE MIR -135 127 3 2521 55 0 0 chr20 21726214 21726523 -50427359 - AluY SINE Alu -2 309 1 857 244 16 5 chr20 21726618 21726811 -50427071 - LTR16C LTR ERVL 0 491 297 253 227 99 116 chr20 21727055 21727133 -50426749 - MIR3 SINE MIR -23 185 107 2200 112 0 3 chr20 21727133 21727446 -50426436 + AluSx SINE Alu 1 312 0 253 227 99 116 chr20 21727446 21727539 -50426343 - MIR3 SINE MIR -101 107 17 189 0 0 0 chr20 21728377 21728398 -50425484 + (A)n Simple_repeat Simple_repeat 1 21 0 231 195 49 37 chr20 21729912 21729994 -50423888 + L1MC4 LINE L1 6616 6698 -1344 807 214 37 81 chr20 21730768 21730887 -50422995 - MER112 DNA MER1_type 0 260 137 396 59 0 0 chr20 21730887 21730938 -50422944 + (AATAG)n Simple_repeat Simple_repeat 2 52 0 807 214 37 81 chr20 21730938 21731089 -50422793 - MER112 DNA MER1_type -123 137 2 600 249 154 71 chr20 21731098 21731498 -50422384 - MLT1J2 LTR MaLR 0 450 1 27 87 0 0 chr20 21731640 21731709 -50422173 + AT_rich Low_complexity Low_complexity 1 69 0 979 155 6 0 chr20 21731749 21731910 -50421972 + AluJb SINE Alu 134 295 -17 1895 113 19 44 chr20 21733821 21733856 -50420026 - AluSx SINE Alu -2 310 276 222 37 0 0 chr20 21733856 21733883 -50419999 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1895 113 19 44 chr20 21733883 21734165 -50419717 - AluSx SINE Alu -36 276 1 853 217 136 5 chr20 21734325 21734523 -50419359 + MER58A DNA MER1_type 1 224 0 516 320 35 35 chr20 21734623 21734882 -50419000 + LTR16C LTR ERVL 140 398 -93 420 156 125 16 chr20 21734879 21735007 -50418875 - LTR50 LTR ERVL -14 781 640 * 1143 192 225 15 chr20 21735474 21735705 -50418177 - LTR50 LTR ERVL -166 629 448 2278 150 8 3 chr20 21735705 21736066 -50417816 - MLT1A1 LTR MaLR 0 365 3 1143 192 225 15 chr20 21736066 21736279 -50417603 - LTR50 LTR ERVL -347 448 10 276 162 40 27 chr20 21736282 21736356 -50417526 + LTR16C LTR ERVL 408 482 -9 1023 282 52 24 chr20 21736835 21737218 -50416664 - LTR16C LTR ERVL 0 491 98 798 299 76 24 chr20 21737824 21738282 -50415600 + L2 LINE L2 2832 3313 0 251 273 0 0 chr20 21739075 21739130 -50414752 + L2 LINE L2 3217 3271 -1 1002 253 94 14 chr20 21739256 21739659 -50414223 + LTR16C LTR ERVL 2 489 -2 529 256 85 0 chr20 21742059 21742223 -50411659 - MER45A DNA AcHobo 0 178 1 200 217 0 0 chr20 21743349 21743395 -50410487 + T-rich Low_complexity Low_complexity 1 46 0 226 208 0 0 chr20 21743467 21743515 -50410367 - L1MC4 LINE L1 -1340 6702 6655 277 281 0 0 chr20 21743526 21743615 -50410267 - L1MC4 LINE L1 -1339 6703 6615 230 152 0 0 chr20 21743618 21743664 -50410218 - LTR66 LTR ERVL -171 439 394 291 191 0 0 chr20 21743664 21743727 -50410155 + (TA)n Simple_repeat Simple_repeat 2 64 0 444 256 45 0 chr20 21743739 21743872 -50410010 + L1MC4 LINE L1 7904 8042 0 600 243 135 46 chr20 21744567 21744826 -50409056 + L2 LINE L2 3032 3313 0 1545 171 16 23 chr20 21745277 21745581 -50408301 - AluJb SINE Alu -10 302 1 2062 111 3 0 chr20 21745684 21745973 -50407909 + AluSx SINE Alu 11 300 -12 2209 197 18 16 chr20 21746361 21746797 -50407085 + Tigger3(Golem) DNA MER2_type 1 437 -2592 250 171 29 14 chr20 21746786 21746856 -50407026 + Tigger3(Golem) DNA MER2_type 2451 2521 -508 * 437 184 51 0 chr20 21747014 21747112 -50406770 - MER5A DNA MER1_type -78 111 9 1874 92 35 0 chr20 21747317 21747577 -50406305 + AluSx SINE Alu 1 269 -43 323 78 39 0 chr20 21747597 21747648 -50406234 + AluSx SINE Alu 246 298 -4 1701 231 117 10 chr20 21748213 21748736 -50405146 + L1MC4a LINE L1 7229 7807 -1 1456 171 10 45 chr20 21749067 21749359 -50404523 - AluJb SINE Alu -25 287 6 510 213 199 0 chr20 21749530 21749671 -50404211 - MIR SINE MIR -45 217 49 209 157 78 20 chr20 21750799 21750850 -50403032 + L2 LINE L2 3121 3174 -98 266 0 29 0 chr20 21750939 21750973 -50402909 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 506 224 86 0 chr20 21751291 21751465 -50402417 - MER5A DNA MER1_type 0 189 1 461 217 51 14 chr20 21751771 21751909 -50401973 + MER5A DNA MER1_type 3 145 -44 836 236 123 44 chr20 21751917 21752391 -50401491 + MLT1E2 LTR MaLR 7 552 -73 502 196 104 23 chr20 21752464 21752556 -50401326 + Charlie4 DNA MER1_type 1738 1821 -140 1834 165 0 3 chr20 21752556 21752859 -50401023 - AluJb SINE Alu -10 302 1 502 196 104 23 chr20 21752859 21752939 -50400943 + Charlie4 DNA MER1_type 1821 1924 -37 409 220 39 136 chr20 21753228 21753307 -50400575 + MER112 DNA MER1_type 1 86 -174 306 0 0 0 chr20 21753307 21753341 -50400541 + (TG)n Simple_repeat Simple_repeat 2 35 0 409 220 39 136 chr20 21753341 21753547 -50400335 + MER112 DNA MER1_type 86 258 -2 282 150 24 47 chr20 21753584 21753711 -50400171 + (CA)n Simple_repeat Simple_repeat 1 124 0 238 259 0 0 chr20 21754726 21754780 -50399102 - MER81 DNA DNA -58 56 3 1395 198 34 60 chr20 21755103 21755487 -50398395 + MLT1A2 LTR MaLR 1 374 0 305 377 22 0 chr20 21755561 21755699 -50398183 + MIR3 SINE MIR 30 170 -38 306 284 205 0 chr20 21756159 21756286 -50397596 - MER5A DNA MER1_type 0 189 37 188 303 165 37 chr20 21756747 21756856 -50397026 - MER5B DNA MER1_type -53 125 3 795 191 0 0 chr20 21757014 21757145 -50396737 - FLAM_A SINE Alu -2 131 1 1073 218 79 21 chr20 21757461 21757741 -50396141 + L1ME LINE L1 5301 5596 -570 1689 178 0 10 chr20 21758471 21758763 -50395119 + AluJo SINE Alu 3 291 -21 329 244 154 41 chr20 21758811 21758934 -50394948 + MIR SINE MIR 13 149 -113 650 278 104 50 chr20 21758951 21759354 -50394528 + LTR16A1 LTR ERVL 30 454 -3 255 61 0 0 chr20 21759420 21759453 -50394429 + (CAT)n Simple_repeat Simple_repeat 2 34 0 1526 204 103 24 chr20 21759707 21760162 -50393720 - LTR16C LTR ERVL 0 491 1 235 288 45 0 chr20 21760200 21760266 -50393616 - MIR SINE MIR -115 147 79 195 259 165 42 chr20 21760304 21760516 -50393366 + L3 LINE CR1 1166 1403 -174 182 146 49 24 chr20 21760922 21760963 -50392919 + MER5A DNA MER1_type 34 75 -114 * 255 143 41 0 chr20 21760960 21761009 -50392873 - MER5A DNA MER1_type -84 105 55 1132 162 0 68 chr20 21761043 21761277 -50392605 + MER20 DNA MER1_type 2 219 0 2148 100 7 0 chr20 21762081 21762370 -50391512 + AluSp SINE Alu 1 291 -22 21 36 0 0 chr20 21762370 21762398 -50391484 + AT_rich Low_complexity Low_complexity 1 28 0 193 28 0 56 chr20 21763369 21763405 -50390477 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1456 98 0 0 chr20 21763425 21763618 -50390264 - AluSx SINE Alu -119 193 1 1608 153 18 11 chr20 21763618 21763900 -50389982 - MER33 DNA MER1_type -40 284 1 245 198 198 12 chr20 21764830 21764911 -50388971 - MLT1K LTR MaLR -348 240 145 716 171 55 111 chr20 21766111 21766310 -50387572 + MER5A DNA MER1_type 1 188 -1 205 255 13 67 chr20 21766649 21766798 -50387084 + CT-rich Low_complexity Low_complexity 1 141 0 714 253 77 9 chr20 21767715 21767948 -50385934 - LTR16C LTR ERVL -8 483 235 250 407 28 7 chr20 21768226 21768371 -50385511 + MIR3 SINE MIR 23 170 -38 311 288 50 22 chr20 21768450 21768589 -50385293 + MER113 DNA MER1_type? 22 164 -357 437 227 15 76 chr20 21768781 21768913 -50384969 - MIR SINE MIR -58 204 81 227 301 81 58 chr20 21769919 21770092 -50383790 + MER117 DNA MER1_type 2 178 -19 290 253 33 11 chr20 21771386 21771477 -50382405 - MIR SINE MIR -54 208 116 496 244 24 0 chr20 21771554 21771677 -50382205 + LTR16C LTR ERVL 149 274 -217 818 221 31 78 chr20 21771748 21772006 -50381876 + MLT1J LTR MaLR 17 262 -249 23 0 0 0 chr20 21772173 21772196 -50381686 + GC_rich Low_complexity Low_complexity 1 23 0 3852 148 29 24 chr20 21772196 21772919 -50380963 - L1MB3 LINE L1 -12 6171 5445 2353 66 0 3 chr20 21773482 21773783 -50380099 + AluY SINE Alu 3 302 -9 21 36 0 0 chr20 21774275 21774303 -50379579 + AT_rich Low_complexity Low_complexity 1 28 0 203 292 208 31 chr20 21774974 21775070 -50378812 + MER5A DNA MER1_type 51 163 -26 243 0 0 0 chr20 21775099 21775126 -50378756 + (TG)n Simple_repeat Simple_repeat 1 27 0 2052 102 0 11 chr20 21775126 21775410 -50378472 - AluSx SINE Alu -31 281 1 226 273 172 0 chr20 21775434 21775533 -50378349 - L1MC4a LINE L1 -1688 6120 6005 234 81 0 0 chr20 21775543 21775580 -50378302 + (TG)n Simple_repeat Simple_repeat 2 38 0 449 248 131 0 chr20 21775653 21775806 -50378076 - L1MC4a LINE L1 -1986 5822 5650 253 349 28 0 chr20 21775878 21775984 -50377898 - L1MC4a LINE L1 -2126 5682 5574 700 172 179 0 chr20 21776096 21776230 -50377652 - MER5A DNA MER1_type -28 161 4 324 272 9 29 chr20 21776312 21776422 -50377460 + MIR SINE MIR 46 152 -67 1496 186 38 22 chr20 21776442 21776759 -50377123 + L1ME2 LINE L1 5841 6162 -2 24 0 0 0 chr20 21777373 21777397 -50376485 + GC_rich Low_complexity Low_complexity 1 24 0 2263 68 27 0 chr20 21778175 21778469 -50375413 + AluSx SINE Alu 11 312 0 24 67 0 0 chr20 21778489 21778534 -50375348 + AT_rich Low_complexity Low_complexity 1 45 0 442 113 0 0 chr20 21778534 21778596 -50375286 - FLAM_A SINE Alu -27 115 54 27 0 0 0 chr20 21778700 21778727 -50375155 + AT_rich Low_complexity Low_complexity 1 27 0 692 161 7 54 chr20 21779104 21779253 -50374629 + FLAM_C SINE Alu 2 143 0 369 199 11 24 chr20 21779609 21779699 -50374183 - MLT1I LTR MaLR -265 144 72 327 214 67 22 chr20 21780042 21780131 -50373751 - MLT1I LTR MaLR -315 94 2 182 317 17 0 chr20 21780367 21780427 -50373455 + MIR SINE MIR 90 150 -112 410 298 44 0 chr20 21780439 21780553 -50373329 - MER94 DNA DNA 0 134 16 1328 217 46 108 chr20 21780583 21780772 -50373110 + L1MC4 LINE L1 7473 7672 -370 2037 121 3 7 chr20 21780772 21781078 -50372804 + AluSx SINE Alu 1 305 -7 1328 217 46 108 chr20 21781078 21781283 -50372599 + L1MC4 LINE L1 7672 7820 -222 2052 116 0 7 chr20 21781283 21781577 -50372305 + AluSc SINE Alu 1 292 -17 1328 217 46 108 chr20 21781577 21781784 -50372098 + L1MC4 LINE L1 7820 8038 -4 197 81 0 27 chr20 21781956 21781993 -50371889 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 676 188 0 8 chr20 21781994 21782111 -50371771 - FLAM_C SINE Alu -26 117 2 1592 167 67 0 chr20 21782303 21782585 -50371297 + AluJb SINE Alu 1 301 -11 253 266 255 0 chr20 21782827 21782921 -50370961 + MIR3 SINE MIR 66 183 -25 620 190 132 0 chr20 21782921 21783042 -50370840 + MLT1B LTR MaLR 1 137 -253 315 87 22 0 chr20 21783038 21783084 -50370798 + MLT1B LTR MaLR 344 390 0 * 243 258 32 0 chr20 21783617 21783679 -50370203 + MER90 LTR ERV1 512 575 0 508 228 32 150 chr20 21783679 21783870 -50370012 + L1MC4 LINE L1 7625 7728 -314 1863 164 0 10 chr20 21783870 21784182 -50369700 + AluJb SINE Alu 1 309 -3 508 228 32 150 chr20 21784182 21784464 -50369418 + L1MC4 LINE L1 7728 8042 0 1564 188 13 7 chr20 21785137 21785446 -50368436 - AluJo SINE Alu -1 311 1 1478 159 0 63 chr20 21785528 21785830 -50368052 + AluJb SINE Alu 30 312 0 465 240 0 62 chr20 21786663 21786809 -50367073 + LTR33 LTR ERVL 24 160 -361 365 233 0 44 chr20 21786866 21786956 -50366926 + LTR33 LTR ERVL 329 414 -107 1028 179 0 0 chr20 21787078 21787246 -50366636 + FAM SINE Alu 1 168 -7 550 261 43 72 chr20 21788160 21788342 -50365540 - MER63A DNA MER1_type -1478 210 33 1603 186 0 29 chr20 21788342 21788649 -50365233 + AluJo SINE Alu 1 298 -14 550 261 43 72 chr20 21788649 21788673 -50365209 - MER63A DNA MER1_type -1655 33 10 21 0 0 0 chr20 21788889 21788910 -50364972 + AT_rich Low_complexity Low_complexity 1 21 0 394 321 192 0 chr20 21789828 21790021 -50363861 + MIR SINE MIR 33 262 0 1284 218 37 3 chr20 21790055 21790353 -50363529 - LTR16C LTR ERVL -1 490 183 2776 128 58 5 chr20 21791074 21791504 -50362378 - LTR35 LTR ERV1 -2 616 164 397 184 26 26 chr20 21791511 21791563 -50362319 + AluJ/FLAM SINE Alu 1 52 -250 3459 165 2 4 chr20 21791563 21792107 -50361775 + MER41D LTR ERV1 1 543 -14 1494 166 40 146 chr20 21792107 21792453 -50361429 - THE1C LTR MaLR 0 375 -6 2149 129 0 10 chr20 21792453 21792763 -50361119 + AluSx SINE Alu 1 307 -5 1494 166 40 146 chr20 21792763 21792778 -50361104 - THE1C LTR MaLR -381 4294967290 36 2413 89 0 10 chr20 21792778 21793082 -50360800 + AluSg SINE Alu 1 301 -9 1494 166 40 146 chr20 21793082 21793116 -50360766 - THE1C LTR MaLR -338 37 1 438 218 0 0 chr20 21793135 21793213 -50360669 + AluJb SINE Alu 49 126 -186 201 192 0 19 chr20 21793213 21793265 -50360617 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 525 322 94 8 chr20 21793300 21793545 -50360337 - MER66-int LTR ERV1 -1 6675 6410 2009 131 3 55 chr20 21793754 21794083 -50359799 - AluSx SINE Alu 0 312 1 3115 146 105 41 chr20 21794146 21794811 -50359071 - MER66-int LTR ERV1 -621 5710 5003 243 0 0 0 chr20 21794831 21794858 -50359024 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1839 165 0 11 chr20 21794861 21795140 -50358742 - AluJo SINE Alu -31 281 6 2454 110 40 77 chr20 21795284 21795589 -50358293 - MSTA LTR MaLR 0 428 142 2075 129 0 3 chr20 21795589 21795883 -50357999 + AluSx SINE Alu 3 295 -17 2454 110 40 77 chr20 21795883 21796021 -50357861 - MSTA LTR MaLR -286 142 1 374 234 86 91 chr20 21796148 21796163 -50357719 - MLT1J LTR MaLR -75 436 422 3024 185 14 23 chr20 21796163 21796497 -50357385 - MER41D LTR ERV1 0 557 229 2399 84 0 26 chr20 21796497 21796807 -50357075 - AluSq SINE Alu -11 302 1 3024 185 14 23 chr20 21796807 21797034 -50356848 - MER41D LTR ERV1 -328 229 1 374 234 86 91 chr20 21797034 21797145 -50356737 - MLT1J LTR MaLR -89 422 309 2493 157 36 0 chr20 21797145 21797558 -50356324 - MSTA LTR MaLR 0 428 1 374 234 86 91 chr20 21797558 21797605 -50356277 - MLT1J LTR MaLR -202 309 263 3174 253 77 17 chr20 21797644 21797735 -50356147 - L2 LINE L2 0 3313 3229 2350 112 0 6 chr20 21797735 21798049 -50355833 + AluSq SINE Alu 1 312 -1 3174 253 77 17 chr20 21798049 21799344 -50354538 - L2 LINE L2 -84 3229 1854 590 263 52 56 chr20 21799467 21799737 -50354145 - L2 LINE L2 -9 3304 3036 2006 139 0 0 chr20 21799737 21800024 -50353858 - AluSg SINE Alu -23 287 1 181 284 60 0 chr20 21800163 21800230 -50353652 - L2 LINE L2 -8 3305 3235 1942 126 44 3 chr20 21802497 21802790 -50351092 + AluSx SINE Alu 1 305 -7 234 62 0 0 chr20 21803835 21803867 -50350015 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1684 168 4 4 chr20 21803867 21804147 -50349735 - AluJb SINE Alu -32 280 1 1670 155 9 76 chr20 21804167 21804484 -50349398 - AluJo SINE Alu -16 296 1 564 291 29 0 chr20 21804486 21804661 -50349221 - MIR SINE MIR -72 190 11 1887 202 72 45 chr20 21805048 21805534 -50348348 + MLT1D LTR MaLR 1 499 -6 1116 189 26 0 chr20 21806944 21807134 -50346748 - MER58A DNA MER1_type 0 224 30 978 200 14 27 chr20 21809082 21809302 -50344580 + L1MC1 LINE L1 6092 6308 -25 1283 37 11 22 chr20 21809317 21809672 -50344210 + (GAAA)n Simple_repeat Simple_repeat 1 351 0 225 304 157 49 chr20 21810066 21810086 -50343796 + MIR SINE MIR 37 53 -209 1482 170 93 61 chr20 21810086 21810463 -50343419 - MLT1B LTR MaLR -1 389 1 225 304 157 49 chr20 21810463 21810646 -50343236 + MIR SINE MIR 53 262 0 319 316 7 33 chr20 21810651 21810803 -50343079 - MIR SINE MIR -113 149 2 504 273 17 6 chr20 21811316 21811492 -50342390 - MER5B DNA MER1_type 0 178 1 1146 171 11 91 chr20 21811514 21811789 -50342093 - MLT1C LTR MaLR -210 257 5 2307 98 10 0 chr20 21812290 21812586 -50341296 + AluSx SINE Alu 1 299 -13 8506 174 25 9 chr20 21812799 21814710 -50339172 + L1PA16 LINE L1 3559 5514 -652 2298 91 0 23 chr20 21814710 21815019 -50338863 + AluSc SINE Alu 1 302 -7 8506 174 25 9 chr20 21815019 21815674 -50338208 + L1PA16 LINE L1 5514 6157 -9 231 228 132 77 chr20 21816111 21816355 -50337527 + L1ME4a LINE L1 5699 5941 -180 234 62 0 0 chr20 21817173 21817205 -50336677 + (CA)n Simple_repeat Simple_repeat 1 32 0 592 278 104 0 chr20 21817213 21817386 -50336496 + LTR16B LTR ERVL 8 198 -266 273 254 0 0 chr20 21817509 21817568 -50336314 + LTR16B LTR ERVL 392 450 -14 336 244 0 23 chr20 21817568 21817699 -50336183 + (TA)n Simple_repeat Simple_repeat 1 128 0 380 252 40 60 chr20 21818138 21818289 -50335593 - LTR67 LTR ERVL -1 556 409 2304 106 3 0 chr20 21819142 21819443 -50334439 + AluSp SINE Alu 1 302 -11 905 109 0 43 chr20 21819553 21819691 -50334191 + FLAM_C SINE Alu 1 132 -11 742 261 93 65 chr20 21820858 21821256 -50332626 - MLT1I LTR MaLR 0 409 1 21 36 0 0 chr20 21822366 21822394 -50331488 + AT_rich Low_complexity Low_complexity 1 28 0 691 182 94 68 chr20 21822513 21822705 -50331177 - MER3 DNA MER1_type -3 206 10 692 257 78 80 chr20 21823855 21824303 -50329579 - MLT1H LTR MaLR -4 545 99 580 224 100 0 chr20 21825285 21825455 -50328427 - MIR SINE MIR 0 262 76 1133 22 29 0 chr20 21825539 21825676 -50328206 + L1PA4 LINE L1 6015 6155 0 22 35 0 0 chr20 21825726 21825755 -50328127 + AT_rich Low_complexity Low_complexity 1 29 0 603 233 94 90 chr20 21825852 21825887 -50327995 - MLT1F LTR MaLR 0 555 522 1806 130 130 33 chr20 21825887 21826218 -50327664 - THE1B LTR MaLR 0 364 2 603 233 94 90 chr20 21826218 21826467 -50327415 - MLT1F LTR MaLR -33 522 270 549 211 18 0 chr20 21826467 21826576 -50327306 + MER54A LTR ERVL 1 111 -790 1425 172 52 99 chr20 21826576 21826959 -50326923 - MLT1A1 LTR MaLR 0 365 1 3760 191 18 3 chr20 21826984 21827607 -50326275 - MLT1A1-int LTR MaLR -12 1723 1092 180 0 0 0 chr20 21827633 21827653 -50326229 + (TTAGGG)n Simple_repeat Simple_repeat 4 23 0 47 61 0 0 chr20 21828604 21828686 -50325196 + AT_rich Low_complexity Low_complexity 1 82 0 361 332 106 0 chr20 21828843 21829060 -50324822 - MIR SINE MIR -1 261 22 272 219 0 0 chr20 21829133 21829197 -50324685 - AluJ/monomer SINE Alu 0 302 239 949 121 0 0 chr20 21829203 21829327 -50324555 - FLAM_C SINE Alu -19 124 1 278 356 124 10 chr20 21829776 21829978 -50323904 - MIR SINE MIR -31 231 7 395 352 6 0 chr20 21830899 21831075 -50322807 + (CA)n Simple_repeat Simple_repeat 2 178 0 432 180 94 39 chr20 21833248 21833376 -50320506 - L1ME4a LINE L1 -258 5863 5729 519 306 61 53 chr20 21833432 21833665 -50320217 + L3 LINE CR1 1165 1406 -171 1978 88 0 0 chr20 21833665 21833961 -50319921 + AluY SINE Alu 39 334 0 519 306 61 53 chr20 21833961 21834101 -50319781 + L3 LINE CR1 1406 1543 -34 23 0 0 0 chr20 21834406 21834429 -50319453 + AT_rich Low_complexity Low_complexity 1 23 0 1311 241 12 25 chr20 21834623 21834943 -50318939 - LTR16C LTR ERVL -1 490 175 904 222 69 9 chr20 21836071 21836287 -50317595 - LTR16C LTR ERVL -10 481 253 314 337 116 6 chr20 21836495 21836676 -50317206 + MIR SINE MIR 56 256 -6 973 236 43 111 chr20 21837374 21837933 -50315949 + MLT1H LTR MaLR 29 549 0 237 281 47 0 chr20 21838008 21838072 -50315810 + MER5A DNA MER1_type 72 138 -51 295 250 55 23 chr20 21838072 21838179 -50315703 + MER5A DNA MER1_type 45 165 -24 222 62 0 0 chr20 21838205 21838237 -50315645 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 181 245 142 66 chr20 21838276 21838382 -50315500 + L2 LINE L2 3192 3305 -8 209 317 109 20 chr20 21839523 21839624 -50314258 - L2 LINE L2 -7 3265 3156 1052 92 0 6 chr20 21840106 21840270 -50313612 + (TGGA)n Simple_repeat Simple_repeat 4 166 0 2908 177 78 19 chr20 21841130 21841746 -50312136 + MLT1E1 LTR MaLR 3 654 0 807 291 42 4 chr20 21841958 21842195 -50311687 + MIR SINE MIR 17 262 0 289 323 11 11 chr20 21842192 21842285 -50311597 - MIR SINE MIR -154 108 16 * 307 242 30 30 chr20 21842433 21842565 -50311317 + LTR16A1 LTR ERVL 320 451 -6 185 250 0 0 chr20 21843073 21843113 -50310769 + MIR SINE MIR 100 139 -69 555 296 56 0 chr20 21843768 21843947 -50309935 - MIR SINE MIR -8 254 66 454 306 123 33 chr20 21843974 21844340 -50309542 + L2 LINE L2 2371 2769 -545 403 286 48 42 chr20 21844491 21844680 -50309202 + L2 LINE L2 3122 3311 -2 210 171 0 0 chr20 21845171 21845206 -50308676 + A-rich Low_complexity Low_complexity 1 35 0 1948 117 3 50 chr20 21845835 21846134 -50307748 + AluSp SINE Alu 1 285 -28 1566 206 20 0 chr20 21846181 21846473 -50307409 + AluJo SINE Alu 1 298 -14 955 203 66 14 chr20 21846533 21846745 -50307137 + MER58A DNA MER1_type 2 224 0 250 385 82 0 chr20 21846818 21846953 -50306929 + MIR3 SINE MIR 52 197 -11 841 302 125 20 chr20 21847166 21847573 -50306309 - LTR16C LTR ERVL 0 491 42 466 222 76 29 chr20 21847625 21847796 -50306086 - Charlie7 DNA MER1_type 0 2612 2434 2181 140 46 96 chr20 21847811 21848332 -50305550 + L1MB3 LINE L1 5686 6180 -3 234 288 0 0 chr20 21848373 21848446 -50305436 - Charlie7 DNA MER1_type -2535 77 5 283 287 37 59 chr20 21848594 21848730 -50305152 + MIR SINE MIR 28 160 -102 2187 193 62 33 chr20 21848786 21849305 -50304577 - MLT1F LTR MaLR 0 542 9 615 288 90 65 chr20 21849315 21849925 -50303957 - L2 LINE L2 -76 3237 2595 436 179 86 14 chr20 21850606 21850746 -50303136 + MER113 DNA MER1_type? 67 216 -305 1771 254 63 29 chr20 21851301 21851947 -50301935 + L1ME2 LINE L1 5497 6164 0 517 285 47 27 chr20 21852492 21852748 -50301134 - L1ME LINE L1 -329 5792 5532 1079 187 9 41 chr20 21853209 21853428 -50300454 + AluJo SINE Alu 101 312 0 582 53 9 53 chr20 21853436 21853549 -50300333 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 1448 224 114 11 chr20 21854004 21854459 -50299423 - L1ME1 LINE L1 -19 6147 5646 880 219 52 64 chr20 21854937 21855325 -50298557 - Tigger8 DNA MER2_type -62 604 222 703 189 0 0 chr20 21855546 21855657 -50298225 + FLAM_A SINE Alu 1 111 -31 210 331 26 26 chr20 21856038 21856192 -50297690 - L2 LINE L2 -2557 757 604 428 305 33 12 chr20 21856997 21857175 -50296707 + MIR SINE MIR 17 197 -61 1345 148 5 28 chr20 21858148 21858364 -50295518 - AluJo SINE Alu -16 296 86 2338 90 0 0 chr20 21859016 21859306 -50294576 - AluSg1 SINE Alu -19 290 1 1902 151 33 30 chr20 21859772 21860076 -50293806 + AluJo SINE Alu 1 305 -7 530 214 20 0 chr20 21860080 21860178 -50293704 - MER5A DNA MER1_type -87 102 3 27 29 0 0 chr20 21860538 21860572 -50293310 + AT_rich Low_complexity Low_complexity 1 34 0 2469 50 7 3 chr20 21860615 21860914 -50292968 + AluY SINE Alu 1 300 -11 2602 143 38 2 chr20 21860934 21861411 -50292471 + L1MB3 LINE L1 5687 6180 -3 2047 200 167 22 chr20 21861431 21862097 -50291785 - L1MC4a LINE L1 -53 7755 6994 1980 143 20 7 chr20 21862208 21862509 -50291373 + AluSq SINE Alu 1 305 -8 23 33 0 0 chr20 21862640 21862670 -50291212 + AT_rich Low_complexity Low_complexity 1 30 0 2170 237 42 19 chr20 21863060 21863637 -50290245 - MLT1G LTR MaLR 0 590 1 720 260 135 5 chr20 21863857 21864049 -50289833 - MIR SINE MIR -33 229 13 376 313 52 0 chr20 21864072 21864187 -50289695 + L2 LINE L2 3121 3241 -31 266 285 61 30 chr20 21864425 21864590 -50289292 + L1ME LINE L1 5555 5724 -2084 * 5927 219 41 19 chr20 21864576 21866735 -50287147 - L1MB7 LINE L1 0 6682 4452 2426 81 0 0 chr20 21866735 21867031 -50286851 - AluY SINE Alu -15 296 1 5927 219 41 19 chr20 21867031 21867524 -50286358 - L1MB7 LINE L1 -2230 4452 3972 1185 172 26 99 chr20 21867524 21867988 -50285894 - L1MB7 LINE L1 -5164 1378 949 3344 67 9 0 chr20 21868017 21868452 -50285430 - L1PA7 LINE L1 -1 6153 5715 2973 78 16 2 chr20 21868452 21868875 -50285007 + L1PA7 LINE L1 5275 5703 -451 3053 256 31 34 chr20 21868881 21869825 -50284057 - L1MB7 LINE L1 -5585 957 17 334 227 17 34 chr20 21869849 21869968 -50283914 + L1ME LINE L1 5703 5819 -302 698 87 10 0 chr20 21869980 21870083 -50283799 + L1PA14 LINE L1 6057 6160 -1 324 0 0 0 chr20 21870152 21870188 -50283694 + (TG)n Simple_repeat Simple_repeat 2 37 0 36 40 0 0 chr20 21870383 21870433 -50283449 + AT_rich Low_complexity Low_complexity 1 50 0 360 285 62 21 chr20 21870788 21870932 -50282950 - MIR3 SINE MIR -54 154 5 23 0 0 0 chr20 21875616 21875639 -50278243 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr20 21876164 21876196 -50277686 + AT_rich Low_complexity Low_complexity 1 32 0 2030 130 0 0 chr20 21876242 21876526 -50277356 - AluSx SINE Alu 0 312 29 260 257 30 30 chr20 21877236 21877337 -50276545 - MIR SINE MIR -66 142 42 612 300 96 18 chr20 21877980 21878369 -50275513 - LTR16A LTR ERVL -9 441 1 275 104 21 0 chr20 21879419 21879467 -50274415 + (TA)n Simple_repeat Simple_repeat 2 50 0 2207 283 60 32 chr20 21879559 21880800 -50273082 - L2 LINE L2 -3 3310 2035 358 323 61 26 chr20 21882219 21882384 -50271498 + MIR3 SINE MIR 32 208 0 202 324 28 56 chr20 21882361 21882469 -50271413 - MIR SINE MIR -84 124 20 * 427 313 30 22 chr20 21883002 21883232 -50270650 - Charlie8 DNA MER1_type -2152 265 34 1139 284 200 46 chr20 21883255 21884085 -50269797 - L3 LINE CR1 -56 1521 564 191 239 56 42 chr20 21884659 21884730 -50269152 + MIR SINE MIR 66 137 -125 405 328 40 58 chr20 21885086 21885485 -50268397 - MLT1I LTR MaLR -2 407 16 511 261 121 52 chr20 21885711 21886205 -50267677 + MLT1H1 LTR MaLR 42 553 -2 288 53 0 0 chr20 21886466 21886504 -50267378 + (TA)n Simple_repeat Simple_repeat 1 38 0 389 294 17 17 chr20 21886720 21886877 -50267005 + MIR SINE MIR 37 189 -64 382 291 76 57 chr20 21887210 21887420 -50266462 + MIR SINE MIR 3 216 -46 710 258 104 22 chr20 21887608 21887836 -50266046 - HAL1 LINE L1 -31 2476 2268 321 26 0 0 chr20 21887836 21887874 -50266008 + (CA)n Simple_repeat Simple_repeat 2 39 0 710 258 104 22 chr20 21887874 21888048 -50265834 - HAL1 LINE L1 -239 2268 2041 11188 20 0 0 chr20 21888056 21890114 -50263768 + L1PA4 LINE L1 4088 6145 -10 637 122 0 0 chr20 21890144 21890234 -50263648 + FLAM_C SINE Alu 22 111 -32 694 300 123 11 chr20 21890248 21890791 -50263091 - HAL1 LINE L1 -475 2032 1429 2100 73 69 0 chr20 21890922 21891197 -50262685 + AluSp SINE Alu 9 302 -11 30 0 0 0 chr20 21891296 21891326 -50262556 + AT_rich Low_complexity Low_complexity 1 30 0 352 289 38 44 chr20 21891540 21891699 -50262183 - L1MC4a LINE L1 -1878 5930 5773 290 188 16 0 chr20 21891745 21891809 -50262073 - L1MC4a LINE L1 -440 5681 5617 251 228 0 0 chr20 21893519 21893576 -50260306 + (TA)n Simple_repeat Simple_repeat 1 57 0 213 94 0 0 chr20 21893624 21893656 -50260226 + (CA)n Simple_repeat Simple_repeat 1 32 0 280 214 10 10 chr20 21894551 21894649 -50259233 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 2122 176 19 77 chr20 21895883 21896029 -50257853 - LTR54 LTR ERV1 0 510 357 3111 156 4 20 chr20 21896029 21896569 -50257313 - LTR26B LTR ERV1 0 531 1 2122 176 19 77 chr20 21896569 21896956 -50256926 - LTR54 LTR ERV1 -153 357 8 2275 120 33 64 chr20 21898221 21898645 -50255237 - MLT2D LTR ERVL -3 411 1 333 47 0 0 chr20 21898812 21898855 -50255027 + (TG)n Simple_repeat Simple_repeat 2 44 0 2058 172 24 5 chr20 21899889 21900272 -50253610 + MLT1B LTR MaLR 1 390 0 695 188 56 0 chr20 21900760 21900904 -50252978 + L1MC1 LINE L1 6176 6327 -6 347 249 47 74 chr20 21901160 21901417 -50252465 - L1ME4a LINE L1 -295 5826 5577 253 208 57 47 chr20 21901448 21901568 -50252314 - L1P4 LINE L1 -700 5466 5346 241 203 47 78 chr20 21901593 21901657 -50252225 + L2 LINE L2 3209 3270 -2 383 293 47 20 chr20 21901829 21901979 -50251903 - MIR SINE MIR -26 236 83 1639 217 25 15 chr20 21902091 21902483 -50251399 - MSTD LTR MaLR 0 396 1 663 285 127 20 chr20 21902558 21902759 -50251123 - L1MC4a LINE L1 -1763 6028 5850 228 35 0 0 chr20 21902759 21902788 -50251094 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 663 285 127 20 chr20 21902788 21903035 -50250847 - L1MC4a LINE L1 -1941 5850 5532 839 243 31 28 chr20 21903074 21903329 -50250553 - MLT1J LTR MaLR -2 509 254 373 296 55 76 chr20 21903969 21904216 -50249666 - L1MC4a LINE L1 -1542 4587 4347 2061 141 7 0 chr20 21904216 21904515 -50249367 - AluSx SINE Alu -11 301 1 373 296 55 76 chr20 21904515 21904611 -50249271 - L1MC4a LINE L1 -1782 4347 4251 241 286 48 0 chr20 21904719 21904824 -50249058 - L1P LINE L1 -1989 4157 4048 494 366 71 30 chr20 21904839 21905476 -50248406 - L1MC4a LINE L1 -2127 4002 3340 2623 32 0 6 chr20 21905484 21905796 -50248086 - AluY SINE Alu -1 310 1 641 292 149 53 chr20 21905892 21906382 -50247500 - HAL1 LINE L1 -875 1632 1096 288 0 0 0 chr20 21906604 21906636 -50247246 + (CA)n Simple_repeat Simple_repeat 2 33 0 206 206 44 44 chr20 21906710 21906778 -50247104 - MIR SINE MIR -191 71 4 349 90 30 0 chr20 21906866 21906933 -50246949 + (TTTA)n Simple_repeat Simple_repeat 4 72 0 1693 152 43 20 chr20 21906943 21907246 -50246636 - AluJo SINE Alu -2 310 1 25 31 0 0 chr20 21908089 21908121 -50245761 + AT_rich Low_complexity Low_complexity 1 32 0 363 289 89 34 chr20 21908503 21908738 -50245144 - L2 LINE L2 -343 2971 2724 408 346 50 21 chr20 21909082 21909334 -50244548 - L1MEc LINE L1 -3732 2397 2161 985 162 11 16 chr20 21909735 21909926 -50243956 + MER20 DNA MER1_type 17 206 -13 334 373 63 20 chr20 21910724 21910976 -50242906 - L1M4 LINE L1 -1311 4835 4573 308 337 92 25 chr20 21910995 21911158 -50242724 - L1MEc LINE L1 -5002 1117 944 41 17 0 17 chr20 21913010 21913041 -50240841 + AT_rich Low_complexity Low_complexity 1 32 -26 2077 121 3 0 chr20 21913041 21913323 -50240559 + AluSg SINE Alu 1 283 -27 41 17 0 17 chr20 21913323 21913350 -50240532 + AT_rich Low_complexity Low_complexity 32 58 0 325 378 32 16 chr20 21913808 21913993 -50239889 - HAL1 LINE L1 -742 1765 1578 185 65 32 0 chr20 21914560 21914591 -50239291 + (TA)n Simple_repeat Simple_repeat 2 33 0 283 142 71 12 chr20 21914637 21914806 -50239076 + (TA)n Simple_repeat Simple_repeat 1 179 0 439 38 119 6 chr20 21914828 21914976 -50238906 + (TA)n Simple_repeat Simple_repeat 2 171 -8 2008 136 0 10 chr20 21914976 21915270 -50238612 - AluSx SINE Alu -21 291 1 439 38 119 6 chr20 21915270 21915281 -50238601 + (TA)n Simple_repeat Simple_repeat 171 179 0 185 65 32 0 chr20 21915339 21915370 -50238512 + (TA)n Simple_repeat Simple_repeat 2 33 0 582 245 72 10 chr20 21915421 21915610 -50238272 + MIR SINE MIR 60 259 -3 257 223 43 53 chr20 21915632 21915726 -50238156 + L2 LINE L2 3221 3313 0 363 287 104 0 chr20 21916059 21916174 -50237708 + MIR SINE MIR 29 155 -107 444 221 74 40 chr20 21916884 21917033 -50236849 + MIR SINE MIR 39 192 -70 244 232 11 95 chr20 21917098 21917193 -50236689 + L2 LINE L2 3186 3272 0 365 246 115 52 chr20 21919003 21919194 -50234688 - L2 LINE L2 -4 3309 3107 1588 132 34 8 chr20 21919196 21919462 -50234420 - MSTA LTR MaLR -2 426 154 1540 137 4 8 chr20 21919462 21919717 -50234165 - MSTA LTR MaLR -174 254 1 585 300 72 45 chr20 21919727 21919950 -50233932 - L2 LINE L2 -222 3091 2863 1892 225 65 45 chr20 21919959 21920497 -50233385 - MLT1H LTR MaLR 0 549 1 473 87 0 0 chr20 21920858 21920927 -50232955 - MSTA LTR MaLR 0 428 360 2119 135 7 0 chr20 21920927 21921321 -50232561 + AluSx SINE Alu 2 397 0 1241 151 34 21 chr20 21921328 21921566 -50232316 - MSTA LTR MaLR -58 370 130 190 426 41 0 chr20 21921985 21922107 -50231775 + L2 LINE L2 3136 3262 -10 2102 93 0 43 chr20 21922108 21922409 -50231473 + AluSg1 SINE Alu 9 296 -13 184 211 26 0 chr20 21923045 21923083 -50230799 - MIR SINE MIR -138 70 32 1295 187 3 16 chr20 21924391 21924696 -50229186 - MER33 DNA MER1_type -4 320 20 267 298 12 0 chr20 21926317 21926401 -50227481 + L3b LINE CR1 1333 1417 -166 572 211 63 0 chr20 21927830 21927972 -50225910 + LTR16C LTR ERVL 331 481 -10 591 271 59 73 chr20 21930603 21931027 -50222855 - MLT1H LTR MaLR -3 546 129 842 253 73 13 chr20 21931872 21932173 -50221709 - LTR16C LTR ERVL -76 415 97 370 316 83 0 chr20 21932572 21932705 -50221177 + MIR SINE MIR 37 180 -82 883 179 31 2 chr20 21933496 21933755 -50220127 - MER110 LTR ERV1 -21 470 159 2133 118 45 24 chr20 21933755 21933907 -50219975 + MLT1B LTR MaLR 1 148 -242 1435 166 19 152 chr20 21933907 21934245 -50219637 - MLT1A1 LTR MaLR 0 365 -16 216 0 0 0 chr20 21934245 21934269 -50219613 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2139 113 3 3 chr20 21934271 21934555 -50219327 - AluSx SINE Alu -28 284 1 1435 166 19 152 chr20 21934555 21934634 -50219248 - MLT1A1 LTR MaLR -276 89 1 2133 118 45 24 chr20 21934634 21934863 -50219019 + MLT1B LTR MaLR 148 390 0 302 189 95 14 chr20 21934894 21934968 -50218914 - MIR SINE MIR -142 120 41 1216 258 48 15 chr20 21935230 21935560 -50218322 + LTR16C LTR ERVL 37 377 -114 292 204 80 35 chr20 21935791 21935904 -50217978 - LTR67 LTR ERVL -8 549 432 388 313 15 8 chr20 21936542 21936676 -50217206 + L2 LINE L2 3179 3313 0 230 153 0 125 chr20 21936949 21937021 -50216861 - MLT1H LTR MaLR -4 545 483 297 299 20 45 chr20 21937327 21937528 -50216354 - MLT1H LTR MaLR -259 290 95 1613 167 36 0 chr20 21937693 21938022 -50215860 + L1MC3 LINE L1 7430 7770 -15 316 243 47 6 chr20 21939709 21939878 -50214004 + (TA)n Simple_repeat Simple_repeat 2 177 0 372 318 16 23 chr20 21940045 21940174 -50213708 - MIR3 SINE MIR -21 187 60 31 0 0 0 chr20 21940448 21940479 -50213403 + AT_rich Low_complexity Low_complexity 1 31 0 1426 155 47 25 chr20 21941322 21941639 -50212243 - MER33 DNA MER1_type 0 324 1 2080 82 0 82 chr20 21941702 21942049 -50211833 + AluSg SINE Alu 1 289 -21 298 263 122 78 chr20 21942194 21942399 -50211483 - MLT1L LTR MaLR -207 408 195 226 268 31 72 chr20 21942736 21942833 -50211049 - MIR SINE MIR -150 112 20 426 258 42 83 chr20 21943373 21943590 -50210292 - MIR SINE MIR 0 262 55 955 216 32 11 chr20 21943927 21944112 -50209770 + MER5A DNA MER1_type 1 189 0 1563 183 63 45 chr20 21944341 21944723 -50209159 + L1MC4 LINE L1 7654 8042 0 571 204 275 0 chr20 21945089 21945256 -50208626 + MIR SINE MIR 40 252 -10 234 0 0 0 chr20 21945301 21945327 -50208555 + (TA)n Simple_repeat Simple_repeat 2 27 0 403 236 22 0 chr20 21945380 21945469 -50208413 - MIR3 SINE MIR -46 162 72 319 277 0 12 chr20 21946341 21946424 -50207458 + MIR SINE MIR 69 150 -112 583 240 149 57 chr20 21946424 21946807 -50207075 - MLT1F LTR MaLR -2 540 123 315 0 0 0 chr20 21946818 21946853 -50207029 + (TG)n Simple_repeat Simple_repeat 2 36 0 3147 102 25 2 chr20 21946890 21947248 -50206634 - L1PB1 LINE L1 0 6151 5780 324 0 0 0 chr20 21947248 21947284 -50206598 + (TG)n Simple_repeat Simple_repeat 2 37 0 3147 102 25 2 chr20 21947284 21947364 -50206518 - L1PB1 LINE L1 -371 5780 5703 460 290 29 22 chr20 21947367 21947505 -50206377 - MLT1F LTR MaLR -451 139 1 1634 167 20 31 chr20 21949040 21949333 -50204549 + AluJb SINE Alu 7 296 -16 494 133 0 0 chr20 21949578 21949661 -50204221 - AluS SINE Alu -3 309 227 878 185 11 11 chr20 21999844 22000028 -50153854 - MER53 DNA DNA -5 184 1 763 208 158 67 chr20 22000338 22000756 -50153126 - LTR16A1 LTR ERVL 0 457 2 1931 173 70 70 chr20 22001681 22001855 -50152027 + L1MB2 LINE L1 5640 5812 -359 1686 143 37 37 chr20 22001855 22002149 -50151733 + AluJo SINE Alu 1 294 -18 1931 173 70 70 chr20 22002149 22002440 -50151442 + L1MB2 LINE L1 5812 6124 -47 1919 143 0 14 chr20 22002440 22002757 -50151125 + AluJo SINE Alu 3 315 0 1931 173 70 70 chr20 22002757 22002804 -50151078 + L1MB2 LINE L1 6124 6169 -2 2154 113 36 10 chr20 22002815 22003117 -50150765 + AluSx SINE Alu 3 312 0 1208 232 36 42 chr20 22003513 22003849 -50150033 - MER46C DNA MER2_type -4 334 1 250 286 157 43 chr20 22003899 22004039 -50149843 - MIR3 SINE MIR -29 179 24 244 227 0 61 chr20 22004244 22004310 -50149572 + L2 LINE L2 3211 3272 0 239 339 0 0 chr20 22004572 22004634 -50149248 + L2 LINE L2 3252 3313 0 755 274 48 34 chr20 22004656 22004948 -50148934 - MLT1K LTR MaLR -3 585 290 1232 158 81 5 chr20 22005221 22005430 -50148452 - AluJb SINE Alu -1 311 87 1793 149 80 3 chr20 22005473 22005761 -50148121 + AluSx SINE Alu 1 310 -2 748 134 0 25 chr20 22005788 22005907 -50147975 - FLAM_C SINE Alu -26 117 2 1886 109 109 7 chr20 22007088 22007364 -50146518 - AluSg SINE Alu -6 304 1 2281 113 0 22 chr20 22008001 22008319 -50145563 - AluSq SINE Alu 0 313 3 272 290 14 0 chr20 22008333 22008402 -50145480 + MIR3 SINE MIR 91 160 -48 27 0 0 0 chr20 22008566 22008593 -50145289 + AT_rich Low_complexity Low_complexity 1 27 0 755 238 18 6 chr20 22008858 22009026 -50144856 + MER5B DNA MER1_type 3 172 -6 2198 139 8 0 chr20 22009036 22009402 -50144480 + L1MB2 LINE L1 5555 5923 -260 1442 157 16 4 chr20 22009464 22009713 -50144169 + L1MB2 LINE L1 5915 6166 -5 416 227 167 27 chr20 22009762 22009912 -50143970 + MER5A DNA MER1_type 13 183 -6 550 272 138 28 chr20 22009964 22010247 -50143635 + MLT1L LTR MaLR 1 314 -301 2540 87 0 0 chr20 22010269 22010580 -50143302 - AluSx SINE Alu 0 312 2 242 317 10 10 chr20 22010659 22010760 -50143122 + MLT1L LTR MaLR 494 594 -21 1108 173 23 27 chr20 22010760 22010980 -50142902 - MER20 DNA MER1_type 0 219 1 286 303 0 9 chr20 22012377 22012486 -50141396 + MLT1L LTR MaLR 508 615 0 2354 108 0 0 chr20 22012602 22012907 -50140975 + AluSq SINE Alu 1 305 -8 1803 169 0 14 chr20 22015057 22015374 -50138508 - AluJb SINE Alu 0 312 4 523 273 1 46 chr20 22015412 22015643 -50138239 - L1ME3 LINE L1 0 6170 5949 803 212 86 31 chr20 22015706 22015928 -50137954 - L1ME1 LINE L1 -3 6163 5930 1594 150 75 14 chr20 22016622 22016916 -50136966 - AluJb SINE Alu 0 312 1 1131 177 39 12 chr20 22017735 22017989 -50135893 + Charlie5 DNA MER1_type 2364 2624 0 2072 140 3 0 chr20 22018344 22018637 -50135245 + AluSx SINE Alu 1 294 -18 613 322 53 16 chr20 22019001 22019246 -50134636 - MIR SINE MIR 0 262 9 2062 123 48 0 chr20 22019884 22020177 -50133705 + AluSx SINE Alu 1 307 -5 313 217 2 0 chr20 22020433 22020502 -50133380 - MER45 DNA AcHobo -4 1577 105 939 174 12 36 chr20 22020502 22020669 -50133213 + FRAM SINE Alu 4 166 0 2207 105 7 7 chr20 22020674 22020979 -50132903 + AluSc SINE Alu 1 305 -4 268 296 16 40 chr20 22020986 22021111 -50132771 - MER45 DNA AcHobo -1459 122 1 2102 108 38 0 chr20 22021257 22021545 -50132337 - AluSx SINE Alu -13 299 1 227 313 48 0 chr20 22022216 22022299 -50131583 + MIR SINE MIR 176 262 0 23 33 0 0 chr20 22022367 22022397 -50131485 + AT_rich Low_complexity Low_complexity 1 30 0 1154 147 50 46 chr20 22023474 22023692 -50130190 + MER20 DNA MER1_type 1 219 0 2204 113 27 0 chr20 22023698 22024031 -50129851 + AluSx SINE Alu 5 345 0 398 195 258 0 chr20 22024162 22024297 -50129585 + MER5A DNA MER1_type 5 180 -9 436 240 80 57 chr20 22024788 22024963 -50128919 - HAL1b LINE L1 -2 1346 1168 1918 176 158 24 chr20 22024997 22025497 -50128385 - MLT1F1 LTR MaLR 0 567 1 1228 231 67 3 chr20 22025498 22025797 -50128085 - L1ME1 LINE L1 -5 6161 5844 1004 268 96 33 chr20 22025892 22026287 -50127595 + LTR16C LTR ERVL 71 490 -1 542 219 122 87 chr20 22026288 22026496 -50127386 - HAL1b LINE L1 -240 1108 909 3245 67 64 5 chr20 22026496 22026915 -50126967 + MLT2A1 LTR ERVL 1 444 0 542 219 122 87 chr20 22026915 22027180 -50126702 - HAL1b LINE L1 -439 909 618 1112 280 64 21 chr20 22027187 22027576 -50126306 - MLT1I LTR MaLR -2 407 2 954 238 166 47 chr20 22028304 22028775 -50125107 + MLT1H LTR MaLR 23 549 0 420 246 106 55 chr20 22028852 22029042 -50124840 + MIR SINE MIR 2 204 -58 2477 109 0 0 chr20 22029042 22029354 -50124528 + AluSx SINE Alu 1 312 0 180 234 78 16 chr20 22029475 22029539 -50124343 - L3 LINE CR1 0 1577 1510 618 271 97 11 chr20 22030064 22030445 -50123437 - LTR16C LTR ERVL 0 491 64 279 291 106 26 chr20 22030509 22030660 -50123222 + MIR SINE MIR 26 188 -74 2890 171 34 22 chr20 22030719 22031308 -50122574 + L1MA4 LINE L1 5703 6298 -2 212 271 0 0 chr20 22031369 22031417 -50122465 - L2 LINE L2 -208 3064 3017 584 204 19 0 chr20 22031441 22031544 -50122338 + FLAM_C SINE Alu 2 106 -37 1092 231 97 84 chr20 22031924 22032449 -50121433 + MLT1H LTR MaLR 18 549 0 974 224 99 128 chr20 22033273 22033470 -50120412 - L2 LINE L2 -6 3307 3106 2182 118 3 0 chr20 22033470 22033767 -50120115 + AluSp SINE Alu 1 298 -15 974 224 99 128 chr20 22033767 22034386 -50119496 - L2 LINE L2 -207 3106 2462 517 252 0 15 chr20 22034415 22034546 -50119336 - L2 LINE L2 -1258 2056 1928 995 256 113 6 chr20 22034604 22034932 -50118950 - L2 LINE L2 -1669 1645 1283 573 30 50 20 chr20 22035013 22035114 -50118768 + (TAGA)n Simple_repeat Simple_repeat 1 104 0 305 298 63 19 chr20 22035153 22035311 -50118571 + L1ME4a LINE L1 5955 6119 -2 198 347 146 7 chr20 22035771 22035915 -50117967 + MIR3 SINE MIR 23 186 -22 2124 122 0 0 chr20 22035974 22036288 -50117594 + AluSg SINE Alu 1 314 0 1024 275 75 21 chr20 22036401 22036787 -50117095 - MLT1I LTR MaLR 0 409 3 230 390 62 105 chr20 22036945 22037072 -50116810 - L1ME4a LINE L1 -32 6089 5958 1788 172 32 9 chr20 22037072 22037415 -50116467 - L1MB7 LINE L1 -1 6183 5833 230 390 62 105 chr20 22037415 22037443 -50116439 - L1ME4a LINE L1 -163 5958 5930 2058 114 19 23 chr20 22037443 22037751 -50116131 + AluSx SINE Alu 1 307 -5 230 390 62 105 chr20 22037751 22037859 -50116023 - L1ME4a LINE L1 -191 5930 5819 2460 88 0 0 chr20 22037859 22038167 -50115715 - AluSx SINE Alu -4 308 1 230 390 62 105 chr20 22038167 22038434 -50115448 - L1ME4a LINE L1 -302 5819 5580 497 263 120 47 chr20 22038479 22038944 -50114938 + L2 LINE L2 2743 3308 -5 235 191 60 71 chr20 22039812 22039896 -50113986 - MARNA DNA Mariner -145 441 359 2025 248 133 5 chr20 22039975 22040612 -50113270 - L1ME3A LINE L1 -10 6160 5442 883 178 40 7 chr20 22040640 22040792 -50113090 - FRAM SINE Alu -16 160 4 2058 165 104 66 chr20 22040886 22041079 -50112803 - LTR36 LTR ERV1 0 611 427 1971 160 0 10 chr20 22041079 22041386 -50112496 + AluJb SINE Alu 1 304 -8 2058 165 104 66 chr20 22041386 22041781 -50112101 - LTR36 LTR ERV1 -184 427 1 608 294 156 36 chr20 22042359 22043039 -50110843 + L2 LINE L2 2448 3202 -111 315 287 78 47 chr20 22043395 22043524 -50110358 - L2 LINE L2 -23 3249 3117 1244 266 31 6 chr20 22043660 22044010 -50109872 + LTR16C LTR ERVL 133 491 0 531 249 159 5 chr20 22044044 22044245 -50109637 - Charlie8 DNA MER1_type -2152 265 34 590 276 93 1 chr20 22044574 22044760 -50109122 - MIR SINE MIR -28 234 33 249 336 39 19 chr20 22044758 22044862 -50109020 - L2 LINE L2 -484 2830 2725 * 779 329 120 24 chr20 22044942 22045526 -50108356 - L2 LINE L2 -883 2431 1792 216 0 0 0 chr20 22045670 22045694 -50108188 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 791 249 150 27 chr20 22046542 22046875 -50107007 + MLT1G LTR MaLR 217 590 0 575 306 169 21 chr20 22046875 22047544 -50106338 - L2 LINE L2 -27 3286 2450 1743 254 10 60 chr20 22047544 22047949 -50105933 - L1ME LINE L1 -5418 652 285 1984 140 65 0 chr20 22047949 22048242 -50105640 - AluSq SINE Alu -1 312 1 1743 254 10 60 chr20 22048242 22048439 -50105443 - L1ME LINE L1 -5785 285 80 * 4745 150 33 14 chr20 22048428 22049302 -50104580 - L1MD1 LINE L1 -14 6228 5338 270 0 0 0 chr20 22049558 22049588 -50104294 + (TC)n Simple_repeat Simple_repeat 2 31 0 406 286 244 13 chr20 22050410 22050718 -50103164 - MLT1J2 LTR MaLR -6 444 66 298 167 167 0 chr20 22050987 22051047 -50102835 + MER58A DNA MER1_type 7 76 -31 775 144 66 24 chr20 22051103 22051270 -50102612 - MER96B DNA MER1_type? -239 178 5 252 255 14 7 chr20 22051860 22052001 -50101881 + CT-rich Low_complexity Low_complexity 1 142 0 264 161 0 0 chr20 22052064 22052126 -50101756 + CT-rich Low_complexity Low_complexity 2 63 0 616 284 53 72 chr20 22052467 22052529 -50101353 + L1ME3A LINE L1 5603 5665 -505 2112 134 10 3 chr20 22052529 22052834 -50101048 + AluSg SINE Alu 1 307 -3 616 284 53 72 chr20 22052834 22052960 -50100922 + L1ME3A LINE L1 5665 5792 -378 2290 63 0 21 chr20 22052960 22053244 -50100638 + AluY SINE Alu 13 290 -21 616 284 53 72 chr20 22053244 22053578 -50100304 + L1ME3A LINE L1 5792 6116 -54 1542 125 73 31 chr20 22053591 22053878 -50100004 - MSTB1 LTR MaLR -133 299 1 434 306 71 20 chr20 22054580 22054835 -50099047 - MER115 DNA AcHobo -367 326 59 388 203 104 109 chr20 22054901 22055093 -50098789 - L2 LINE L2 -308 3005 2815 2061 234 21 41 chr20 22055120 22055727 -50098155 - L1ME3 LINE L1 -7 6155 5561 441 328 26 5 chr20 22055739 22055928 -50097954 - L2 LINE L2 -569 2745 2553 2041 133 0 3 chr20 22056231 22056525 -50097357 - AluSx SINE Alu -19 293 1 977 283 71 15 chr20 22056950 22057357 -50096525 - MLT1K LTR MaLR -1 587 158 38 0 0 0 chr20 22057460 22057498 -50096384 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr20 22057519 22057542 -50096340 + AT_rich Low_complexity Low_complexity 1 23 0 399 209 12 0 chr20 22057763 22057849 -50096033 - MER117 DNA MER1_type -51 146 60 933 246 30 0 chr20 22058166 22058365 -50095517 + MER63A DNA MER1_type 4 208 -2 1996 151 0 0 chr20 22058746 22059054 -50094828 + AluSx SINE Alu 1 308 0 355 244 57 0 chr20 22059074 22059197 -50094685 - L1MC5 LINE L1 -108 7853 7724 1619 167 0 8 chr20 22059341 22059593 -50094289 - AluSx SINE Alu -13 299 50 1792 144 0 15 chr20 22059594 22059865 -50094017 + AluJo SINE Alu 45 311 -1 230 167 0 21 chr20 22059869 22059917 -50093965 + Charlie8 DNA MER1_type 87 133 -2284 458 291 52 6 chr20 22060008 22060180 -50093702 + LTR16C LTR ERVL 200 379 -112 194 197 49 66 chr20 22060824 22060885 -50092997 + L2 LINE L2 3246 3305 -8 380 223 10 0 chr20 22060934 22061037 -50092845 + CT-rich Low_complexity Low_complexity 1 104 0 551 248 152 33 chr20 22061062 22061364 -50092518 + L1MC4a LINE L1 5706 6043 -1765 665 253 90 80 chr20 22061711 22061880 -50092002 - L2 LINE L2 -1 3312 3146 2129 133 0 0 chr20 22061880 22062180 -50091702 + AluJb SINE Alu 1 300 -12 665 253 90 80 chr20 22062180 22062386 -50091496 - L2 LINE L2 -167 3146 2933 263 273 52 0 chr20 22062762 22062839 -50091043 - MER103 DNA DNA -83 83 3 869 251 127 35 chr20 22063292 22063631 -50090251 + L1ME3 LINE L1 5622 5991 -171 2234 78 0 0 chr20 22063767 22064038 -50089844 + AluSc SINE Alu 35 305 -4 373 308 83 60 chr20 22064134 22064778 -50089104 + L2 LINE L2 2554 3221 -51 841 244 54 27 chr20 22064867 22065125 -50088757 + LTR16C LTR ERVL 75 339 -152 698 197 48 71 chr20 22065125 22065222 -50088660 - LTR29 LTR ERV1 0 622 524 2056 132 36 7 chr20 22065222 22065525 -50088357 + AluSx SINE Alu 1 312 0 698 197 48 71 chr20 22065525 22065667 -50088215 - LTR29 LTR ERV1 -98 524 389 707 105 142 110 chr20 22065677 22065915 -50087967 - LTR29 LTR ERV1 -423 214 1 396 227 103 0 chr20 22065936 22066033 -50087849 + LTR16C LTR ERVL 368 474 -17 723 208 46 20 chr20 22067187 22067384 -50086498 + MER33 DNA MER1_type 30 231 -93 272 200 24 12 chr20 22067401 22067419 -50086463 + A-rich Low_complexity Low_complexity 5 21 -69 10750 51 47 8 chr20 22067419 22068750 -50085132 + SVA Other Other 3 1386 0 272 200 24 12 chr20 22068750 22068816 -50085066 + A-rich Low_complexity Low_complexity 21 90 0 22 0 0 0 chr20 22068894 22068916 -50084966 + AT_rich Low_complexity Low_complexity 1 22 0 204 49 49 49 chr20 22068919 22068960 -50084922 + (TAAAAA)n Simple_repeat Simple_repeat 1 41 0 1939 193 40 24 chr20 22068974 22069091 -50084791 + MLT1C LTR MaLR 3 117 -350 2666 118 41 14 chr20 22069091 22069508 -50084374 + MSTA LTR MaLR 1 428 0 1939 193 40 24 chr20 22069508 22069840 -50084042 + MLT1C LTR MaLR 117 459 -8 314 349 52 23 chr20 22069859 22070031 -50083851 - MIR SINE MIR -66 196 20 1406 141 168 32 chr20 22070033 22070373 -50083509 + LTR45B LTR ERV1 3 388 -101 1042 292 35 44 chr20 22070484 22070916 -50082966 - L2 LINE L2 0 3313 2886 230 275 14 43 chr20 22072036 22072105 -50081777 - MIR3 SINE MIR -49 159 93 1225 208 118 10 chr20 22072511 22072824 -50081058 + L1ME1 LINE L1 5816 6162 -4 380 119 0 17 chr20 22073154 22073213 -50080669 + MLT1G1 LTR MaLR 538 595 0 277 200 0 0 chr20 22073433 22073483 -50080399 + L2 LINE L2 3263 3312 -1 245 288 45 68 chr20 22073676 22073808 -50080074 - L2 LINE L2 -250 3063 2935 318 377 23 8 chr20 22073878 22074008 -50079874 + MIR SINE MIR 22 153 -55 865 264 20 0 chr20 22074024 22074221 -50079661 - MER63A DNA MER1_type -9 201 1 2060 150 40 0 chr20 22074345 22074645 -50079237 + AluSx SINE Alu 1 312 0 246 128 0 0 chr20 22074816 22074855 -50079027 + (CA)n Simple_repeat Simple_repeat 2 40 0 190 256 0 120 chr20 22075269 22075386 -50078496 + MIR SINE MIR 32 134 -74 368 329 150 21 chr20 22075940 22076226 -50077656 - LTR16C LTR ERVL 0 491 169 180 0 0 0 chr20 22076435 22076455 -50077427 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 283 235 184 10 chr20 22076573 22076671 -50077211 + L2 LINE L2 3137 3251 -21 3368 176 43 61 chr20 22077024 22077822 -50076060 - L1MB5 LINE L1 -141 6033 5250 2284 80 19 32 chr20 22077822 22078133 -50075749 + AluY SINE Alu 1 307 -4 3368 176 43 61 chr20 22078133 22078457 -50075425 - L1MB5 LINE L1 -924 5250 4922 475 322 7 7 chr20 22078469 22078612 -50075270 - MIR SINE MIR -74 188 46 297 231 86 0 chr20 22078918 22079035 -50074847 + LTR16C LTR ERVL 362 488 -3 2253 111 0 3 chr20 22079932 22080229 -50073653 - AluSg SINE Alu -14 296 1 787 214 26 13 chr20 22080488 22080642 -50073240 - MER5B DNA MER1_type 0 178 23 469 145 7 179 chr20 22080649 22080794 -50073088 - MER5A DNA MER1_type 0 189 70 903 194 7 0 chr20 22080821 22080976 -50072906 - FRAM SINE Alu -23 153 1 428 265 33 62 chr20 22081284 22081495 -50072387 + L2 LINE L2 2581 2785 -529 292 314 57 0 chr20 22081559 22081664 -50072218 + LTR16B LTR ERVL 91 201 -263 323 296 21 7 chr20 22081916 22082024 -50071858 - LTR16A1 LTR ERVL -49 408 299 477 213 0 0 chr20 22082024 22082117 -50071765 + REP3 LTR ERV 1 93 -469 2073 144 161 7 chr20 22082117 22082547 -50071335 + MLT1D LTR MaLR 1 496 -9 1188 220 124 14 chr20 22082556 22082911 -50070971 + REP3 LTR ERV 89 482 -80 1153 179 5 28 chr20 22083914 22084132 -50069750 - MER58A DNA MER1_type -11 213 1 479 262 71 12 chr20 22084193 22084361 -50069521 + MER117 DNA MER1_type 1 178 -19 315 300 56 0 chr20 22084380 22084470 -50069412 - MIR3 SINE MIR -51 157 63 484 281 61 101 chr20 22085267 22085662 -50068220 + LTR16C LTR ERVL 83 461 -30 681 226 0 0 chr20 22085688 22085812 -50068070 - FLAM_A SINE Alu -5 128 5 545 222 161 24 chr20 22086176 22086424 -50067458 + MLT1K LTR MaLR 303 584 -4 232 196 22 0 chr20 22086629 22086675 -50067207 - LTR16C LTR ERVL 0 491 445 621 275 65 16 chr20 22086764 22087022 -50066860 - MLT1L LTR MaLR -19 596 246 1102 273 19 29 chr20 22087124 22087501 -50066381 + LTR16C LTR ERVL 103 475 -16 355 343 22 59 chr20 22087787 22088058 -50065824 + L3 LINE CR1 628 888 -689 336 137 6 2 chr20 22088072 22088337 -50065545 + AluSq SINE Alu 1 315 0 513 359 63 41 chr20 22088367 22088411 -50065471 + L3 LINE CR1 943 985 -592 1274 202 153 9 chr20 22088411 22088738 -50065144 + MLT1A2 LTR MaLR 1 374 0 513 359 63 41 chr20 22088738 22089055 -50064827 + L3 LINE CR1 985 1312 -265 543 291 122 0 chr20 22089068 22089264 -50064618 - LTR33A LTR ERVL 0 523 304 501 203 57 63 chr20 22089365 22089523 -50064359 - LTR33A LTR ERVL -361 162 6 597 229 23 57 chr20 22090675 22090850 -50063032 + MER5B DNA MER1_type 1 169 -9 733 271 108 55 chr20 22090850 22091359 -50062523 + MLT1F LTR MaLR 1 536 -6 24 0 0 0 chr20 22091587 22091611 -50062271 + AT_rich Low_complexity Low_complexity 1 24 0 259 333 36 14 chr20 22091686 22091824 -50062058 - MIR3 SINE MIR -65 143 3 414 0 0 0 chr20 22091835 22091881 -50062001 + (CA)n Simple_repeat Simple_repeat 2 47 0 805 257 122 75 chr20 22091889 22092341 -50061541 + MLT1J LTR MaLR 1 473 -38 258 167 17 17 chr20 22092979 22093039 -50060843 + MLT1I LTR MaLR 325 384 -25 389 283 187 27 chr20 22093048 22093348 -50060534 + L2 LINE L2 2408 2755 -559 3847 153 34 34 chr20 22093584 22093657 -50060225 + L1MA7 LINE L1 5535 5607 -684 2335 72 0 26 chr20 22093657 22093963 -50059919 + AluY SINE Alu 1 298 -13 3847 153 34 34 chr20 22093963 22094399 -50059483 + L1MA7 LINE L1 5607 6047 -244 2389 65 3 0 chr20 22094399 22094708 -50059174 - AluY SINE Alu -1 310 1 3847 153 34 34 chr20 22094708 22094953 -50058929 + L1MA7 LINE L1 6046 6290 -1 1658 154 10 13 chr20 22094970 22095268 -50058614 + AluJo SINE Alu 1 297 -15 233 276 35 0 chr20 22095285 22095343 -50058539 + L2 LINE L2 3117 3176 -96 228 308 8 26 chr20 22095492 22095609 -50058273 + GA-rich Low_complexity Low_complexity 3 117 0 1049 192 70 96 chr20 22096278 22096621 -50057261 - MER58B DNA MER1_type -3 338 5 233 279 33 0 chr20 22096639 22096700 -50057182 + MER5C DNA MER1_type 62 124 -200 258 197 76 15 chr20 22096802 22096868 -50057014 + MER5C DNA MER1_type 252 321 -3 195 255 160 43 chr20 22097165 22097259 -50056623 - L3b LINE CR1 -121 1462 1358 315 312 46 9 chr20 22097607 22097716 -50056166 + MIR SINE MIR 34 146 -62 599 208 197 22 chr20 22098077 22098255 -50055627 - MER3 DNA MER1_type 0 209 1 374 232 12 12 chr20 22099305 22099387 -50054495 + LTR16C LTR ERVL 399 480 -11 2214 210 47 34 chr20 22100815 22101372 -50052510 - L1MD3 LINE L1 -10 7985 7422 513 174 80 14 chr20 22101366 22101504 -50052378 - L1ME2 LINE L1 -239 5925 5779 * 814 242 58 54 chr20 22101757 22101960 -50051922 + MIR SINE MIR 2 208 -54 2187 107 3 0 chr20 22101960 22102258 -50051624 + AluSx SINE Alu 1 299 -13 814 242 58 54 chr20 22102258 22102314 -50051568 + MIR SINE MIR 208 262 0 2132 99 3 0 chr20 22102333 22102640 -50051242 + AluSp SINE Alu 1 308 0 1485 127 15 50 chr20 22102844 22102879 -50051003 - MLT2D LTR ERVL -2 412 377 323 78 20 0 chr20 22102879 22102930 -50050952 + (TG)n Simple_repeat Simple_repeat 1 52 0 1485 127 15 50 chr20 22102930 22103229 -50050653 - MLT2D LTR ERVL -37 377 1 338 324 48 0 chr20 22103445 22103590 -50050292 - Charlie8 DNA MER1_type -2261 156 5 768 207 56 0 chr20 22103725 22103904 -50049978 - MER5A DNA MER1_type 0 189 1 725 99 0 92 chr20 22104184 22104267 -50049615 + L1MB4 LINE L1 6060 6128 -52 1552 146 91 11 chr20 22104267 22104542 -50049340 + AluJb SINE Alu 1 297 -15 725 99 0 92 chr20 22104542 22104589 -50049293 + L1MB4 LINE L1 6128 6178 -2 244 213 160 27 chr20 22104687 22104762 -50049120 - MIR3 SINE MIR -16 192 108 1108 228 132 59 chr20 22104855 22105316 -50048566 + MLT1D LTR MaLR 8 502 -3 1013 114 108 0 chr20 22106963 22107121 -50046761 - FRAM SINE Alu -5 171 1 1951 293 59 28 chr20 22107268 22107729 -50046153 - MER115 DNA AcHobo -24 669 181 1708 177 0 13 chr20 22107729 22108034 -50045848 + AluJo SINE Alu 1 301 -11 1951 293 59 28 chr20 22108034 22108221 -50045661 - MER115 DNA AcHobo -512 181 1 590 264 6 31 chr20 22108221 22108244 -50045638 + MIR SINE MIR 83 105 -157 1515 164 117 33 chr20 22108244 22108604 -50045278 - MLT1B LTR MaLR 0 390 1 590 264 6 31 chr20 22108604 22108739 -50045143 + MIR SINE MIR 105 237 -25 2018 270 42 13 chr20 22108749 22109275 -50044607 - MLT1H1 LTR MaLR -14 541 1 646 280 93 0 chr20 22109621 22109803 -50044079 + MER63A DNA MER1_type 1 199 -11 240 299 131 0 chr20 22109883 22109982 -50043900 - L2 LINE L2 -236 3036 2921 2392 84 0 0 chr20 22109982 22110292 -50043590 + AluY SINE Alu 1 310 -1 1689 132 7 4 chr20 22110417 22110689 -50043193 + AluSx SINE Alu 1 273 -39 2191 152 70 0 chr20 22110769 22111138 -50042744 - MER57A LTR ERV1 -1 402 8 192 94 31 0 chr20 22111163 22111195 -50042687 - L2 LINE L2 -569 2745 2713 323 266 113 8 chr20 22111774 22111898 -50041984 - MIR SINE MIR -70 192 56 218 246 87 14 chr20 22112702 22112771 -50041111 + MIR SINE MIR 51 124 -84 395 207 111 30 chr20 22112863 22112998 -50040884 + L1MC4 LINE L1 7456 7601 -441 671 221 62 84 chr20 22113059 22113381 -50040501 + L1MC4 LINE L1 7728 8042 0 400 190 51 0 chr20 22113477 22113556 -50040326 - L2 LINE L2 -2 3311 3229 571 237 120 23 chr20 22113675 22113953 -50039929 + LTR16A LTR ERVL 91 437 -13 497 243 53 46 chr20 22113963 22114311 -50039571 - LTR33 LTR ERVL -9 512 106 303 333 8 50 chr20 22114560 22114680 -50039202 + HAL1b LINE L1 816 930 -418 310 286 48 62 chr20 22114709 22114919 -50038963 + HAL1 LINE L1 2245 2451 -56 222 37 0 0 chr20 22114950 22114977 -50038905 + (CA)n Simple_repeat Simple_repeat 2 28 0 1033 281 146 13 chr20 22115149 22115608 -50038274 - MLT1G1 LTR MaLR 0 595 76 35 0 0 0 chr20 22115864 22115899 -50037983 + AT_rich Low_complexity Low_complexity 1 35 0 425 274 44 18 chr20 22116086 22116199 -50037683 + MER91C DNA MER1_type 25 140 0 573 197 197 7 chr20 22116263 22116410 -50037472 + MER5B DNA MER1_type 1 175 -3 296 310 231 20 chr20 22117361 22117664 -50036218 - L2 LINE L2 0 3272 2906 1682 167 7 7 chr20 22118000 22118287 -50035595 + AluJo SINE Alu 2 288 -24 1758 163 147 3 chr20 22118354 22118728 -50035154 + MSTC LTR MaLR 1 428 0 429 326 94 20 chr20 22118728 22119120 -50034762 + L1MC4 LINE L1 7480 7900 -142 1721 173 10 0 chr20 22119126 22119427 -50034455 + AluJo SINE Alu 1 304 -8 188 173 27 40 chr20 22119476 22119551 -50034331 + GA-rich Low_complexity Low_complexity 4 77 0 238 211 228 9 chr20 22119572 22119686 -50034196 + L1MC4 LINE L1 7904 8042 0 248 302 103 17 chr20 22120610 22120726 -50033156 + MIR SINE MIR 20 145 -117 356 135 0 0 chr20 22121130 22121182 -50032700 + Tigger3b DNA MER2_type 41 92 -1139 645 143 0 0 chr20 22121182 22121280 -50032602 + AluJb SINE Alu 204 301 -11 7026 115 41 14 chr20 22121280 22122394 -50031488 + Tigger3b DNA MER2_type 88 1231 0 2145 122 0 0 chr20 22122478 22122781 -50031101 + AluSx SINE Alu 1 303 -9 357 325 0 0 chr20 22122794 22122920 -50030962 + L1P LINE L1 4918 5043 -1103 33 25 0 0 chr20 22122992 22123032 -50030850 + AT_rich Low_complexity Low_complexity 1 40 0 1115 271 98 41 chr20 22123112 22123207 -50030675 + L1MC4a LINE L1 5254 5342 -2466 2131 98 7 0 chr20 22123207 22123502 -50030380 - AluSx SINE Alu -15 297 1 1115 271 98 41 chr20 22123502 22123988 -50029894 + L1MC4a LINE L1 5342 5868 -1940 570 239 66 90 chr20 22125846 22126241 -50027641 - Charlie8 DNA MER1_type -2210 207 3 2110 117 10 3 chr20 22126494 22126801 -50027081 - AluSx SINE Alu -3 309 1 265 209 36 82 chr20 22126963 22127033 -50026849 - MIR SINE MIR -48 214 149 2148 105 0 3 chr20 22127033 22127329 -50026553 - AluSg SINE Alu -15 295 1 265 209 36 82 chr20 22127329 22127368 -50026514 - MIR SINE MIR -113 149 110 612 266 43 60 chr20 22127477 22127778 -50026104 + LTR16A1 LTR ERVL 159 454 -3 1816 112 11 28 chr20 22128368 22128655 -50025227 + AluSx SINE Alu 16 297 -15 5527 244 45 10 chr20 22128662 22128753 -50025129 - L1M4 LINE L1 -2047 4099 4013 1409 210 44 46 chr20 22128753 22129119 -50024763 - MLT1A1 LTR MaLR 0 365 1 5527 244 45 10 chr20 22129119 22130783 -50023099 - L1M4 LINE L1 -2133 4013 2282 944 242 59 59 chr20 22130784 22130939 -50022943 - Tigger1 DNA MER2_type 0 2418 2264 2436 86 0 0 chr20 22130939 22131252 -50022630 + AluSq SINE Alu 1 313 0 944 242 59 59 chr20 22131252 22131484 -50022398 - Tigger1 DNA MER2_type -153 2265 2031 2643 10 0 0 chr20 22131625 22131923 -50021959 + AluY SINE Alu 1 298 -13 1828 159 56 75 chr20 22131923 22132329 -50021553 + L1MC1 LINE L1 137 536 -5890 * 5177 177 49 48 chr20 22132324 22132924 -50020958 + L1MC1 LINE L1 1178 1776 -4650 1799 154 0 10 chr20 22132924 22133223 -50020659 - AluSx SINE Alu -6 306 11 5177 177 49 48 chr20 22133223 22133339 -50020543 + L1MC1 LINE L1 1776 1890 -4536 2104 105 3 7 chr20 22133339 22133643 -50020239 - AluSx SINE Alu -9 303 1 5177 177 49 48 chr20 22133643 22133834 -50020048 + L1MC1 LINE L1 1890 2079 -4347 1917 131 3 0 chr20 22133834 22134117 -50019765 - AluSx SINE Alu -16 296 13 5177 177 49 48 chr20 22134117 22134489 -50019393 + L1MC1 LINE L1 2079 2449 -3977 2230 96 17 0 chr20 22134489 22134790 -50019092 + AluSq SINE Alu 1 306 -7 5177 177 49 48 chr20 22134790 22135375 -50018507 + L1MC1 LINE L1 2449 3045 -3381 6822 123 25 6 chr20 22135378 22136631 -50017251 + L1MA2 LINE L1 5024 6304 0 1863 201 28 100 chr20 22136639 22136938 -50016944 + L1MC1 LINE L1 3032 3351 -3075 819 90 0 0 chr20 22136938 22137049 -50016833 + HY1 scRNA scRNA 1 111 -1 1863 201 28 100 chr20 22137049 22137183 -50016699 + L1MC1 LINE L1 3351 3493 -2933 2095 117 3 3 chr20 22137183 22137483 -50016399 + AluSq SINE Alu 2 301 -12 1863 201 28 100 chr20 22137483 22137520 -50016362 + L1MC1 LINE L1 3493 3531 -2895 1984 129 0 28 chr20 22137520 22137838 -50016044 + AluSx SINE Alu 1 309 -3 1863 201 28 100 chr20 22137838 22138144 -50015738 + L1MC1 LINE L1 3531 3754 -2672 354 243 22 44 chr20 22138182 22138306 -50015576 - L1MC4 LINE L1 -1341 6981 1995 330 288 17 42 chr20 22138311 22138429 -50015453 + L1MC4 LINE L1 6595 6709 -1333 * 351 248 35 53 chr20 22138370 22138483 -50015399 - L1MC4 LINE L1 -1337 6705 6595 335 302 17 26 chr20 22138407 22138523 -50015359 + L1MC4 LINE L1 6595 6709 -1333 * 328 256 17 86 chr20 22138458 22138575 -50015307 - L1MC4 LINE L1 -1339 6703 6595 * 6823 184 36 47 chr20 22138587 22138702 -50015180 + L1MC1 LINE L1 3745 3860 -2753 2062 107 0 0 chr20 22138702 22138982 -50014900 - AluSx SINE Alu -18 294 15 6823 184 36 47 chr20 22138982 22139132 -50014750 + L1MC1 LINE L1 3860 4010 -2603 2063 135 0 0 chr20 22139132 22139443 -50014439 + AluSx SINE Alu 1 311 -1 6823 184 36 47 chr20 22139443 22140399 -50013483 + L1MC1 LINE L1 4010 4975 -1638 1773 136 3 46 chr20 22140399 22140544 -50013338 + AluJb SINE Alu 1 128 -184 1567 181 3 17 chr20 22140544 22140843 -50013039 + AluJo SINE Alu 1 295 -17 1773 136 3 46 chr20 22140843 22140999 -50012883 + AluJb SINE Alu 128 289 -23 6823 184 36 47 chr20 22140999 22141392 -50012490 + L1MC1 LINE L1 4975 5371 -1242 760 208 0 0 chr20 22141392 22141522 -50012360 + FLAM_A SINE Alu 1 130 -3 6823 184 36 47 chr20 22141522 22142598 -50011284 + L1MC1 LINE L1 5371 6402 -211 2079 106 0 3 chr20 22142598 22142916 -50010966 + AluSx SINE Alu 1 317 0 6823 184 36 47 chr20 22142916 22143121 -50010761 + L1MC1 LINE L1 6402 6608 -5 1342 118 32 79 chr20 22143287 22143330 -50010552 - MER33 DNA MER1_type -2303 282 239 1953 104 58 0 chr20 22143330 22143608 -50010274 + AluSg SINE Alu 3 296 -14 1342 118 32 79 chr20 22143608 22143882 -50010000 - MER33 DNA MER1_type -2346 239 1 2551 189 25 32 chr20 22144140 22144702 -50009180 + MER74A LTR ERVL 1 558 0 235 0 0 54 chr20 22144981 22145018 -50008864 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1982 112 0 0 chr20 22145022 22145300 -50008582 - AluSq SINE Alu -35 278 1 1765 164 0 0 chr20 22146036 22146323 -50007559 - AluJb SINE Alu -25 287 1 1995 120 10 0 chr20 22146335 22146627 -50007255 - AluSx SINE Alu -17 295 1 206 286 66 44 chr20 22146746 22146837 -50007045 + L2 LINE L2 3176 3268 -45 2001 145 3 0 chr20 22147046 22147357 -50006525 + AluSx SINE Alu 1 312 0 1366 244 96 12 chr20 22147357 22147762 -50006120 - L1ME3 LINE L1 -46 6116 5678 900 270 22 18 chr20 22147783 22148061 -50005821 - L1ME1 LINE L1 -41 6125 5847 756 141 7 22 chr20 22148068 22148203 -50005679 + MER7A DNA MER2_type 1 131 -215 553 232 116 49 chr20 22148271 22148495 -50005387 - L1ME1 LINE L1 -473 5689 5451 240 248 128 23 chr20 22148551 22148684 -50005198 + LTR16A1 LTR ERVL 1 147 -310 927 248 5 0 chr20 22148741 22148947 -50004935 + LTR16A1 LTR ERVL 251 457 0 239 288 25 0 chr20 22149013 22149093 -50004789 - MLT1J LTR MaLR -6 505 424 1938 99 11 0 chr20 22149456 22149728 -50004154 - AluSp SINE Alu -4 309 35 2128 129 3 0 chr20 22149890 22150201 -50003681 + AluSx SINE Alu 1 312 0 271 277 231 15 chr20 22150380 22150510 -50003372 + L2 LINE L2 3106 3263 -9 1906 137 3 7 chr20 22150518 22150817 -50003065 + AluSq SINE Alu 1 298 -15 2099 115 3 0 chr20 22150893 22151197 -50002685 + AluSp SINE Alu 1 305 -8 943 230 238 48 chr20 22151198 22151677 -50002205 + MLT1G LTR MaLR 19 588 -2 2144 107 3 7 chr20 22151770 22152080 -50001802 - AluSc SINE Alu 0 309 1 487 264 125 43 chr20 22152300 22152508 -50001374 - MER102b DNA MER1_type -10 331 107 1341 221 35 81 chr20 22152693 22153127 -50000755 + L1ME3A LINE L1 5494 5907 -263 234 115 231 0 chr20 22153188 22153240 -50000642 + L1ME3A LINE L1 5922 5985 -185 871 186 11 44 chr20 22153240 22153423 -50000459 - FRAM SINE Alu -2 174 1 4193 97 4 0 chr20 22153432 22153981 -49999901 - MER41A LTR ERV1 -3 551 1 888 192 34 6 chr20 22153987 22154164 -49999718 + L1ME3A LINE L1 5982 6163 -7 1995 117 3 46 chr20 22154167 22154493 -49999389 - AluSx SINE Alu 0 312 1 277 250 0 120 chr20 22154535 22154643 -49999239 + MLT1I LTR MaLR 242 336 -73 423 0 0 0 chr20 22154643 22154690 -49999192 + (TG)n Simple_repeat Simple_repeat 2 48 0 541 179 20 179 chr20 22154907 22154957 -49998925 + MER5A DNA MER1_type 26 82 -107 349 123 18 0 chr20 22154957 22155014 -49998868 + U7 snRNA snRNA 5 62 -1 541 179 20 179 chr20 22155014 22155042 -49998840 + MER5A DNA MER1_type 82 113 -76 2508 116 18 53 chr20 22155042 22155112 -49998770 - Tigger2a DNA MER2_type -2274 434 363 2098 129 0 0 chr20 22155112 22155414 -49998468 - AluSx SINE Alu -10 302 1 2508 116 18 53 chr20 22155414 22155793 -49998089 - Tigger2a DNA MER2_type -2345 363 1 541 179 20 179 chr20 22155793 22155908 -49997974 + MER5A DNA MER1_type 113 189 0 723 209 0 7 chr20 22155914 22156053 -49997829 - MER58B DNA MER1_type -1 340 203 1824 109 69 0 chr20 22156560 22156834 -49997048 - AluSx SINE Alu -19 293 1 694 285 155 24 chr20 22157201 22157626 -49996256 - MLT1K LTR MaLR -41 547 67 905 216 112 65 chr20 22157668 22157792 -49996090 - LTR16C LTR ERVL -2 489 372 2287 56 0 7 chr20 22157792 22158094 -49995788 + AluY SINE Alu 3 302 -9 905 216 112 65 chr20 22158094 22158247 -49995635 - LTR16C LTR ERVL -119 372 199 232 231 0 19 chr20 22158293 22158345 -49995537 + G-rich Low_complexity Low_complexity 5 55 0 26 50 0 0 chr20 22159097 22159137 -49994745 + AT_rich Low_complexity Low_complexity 1 40 0 314 136 0 17 chr20 22159181 22159240 -49994642 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 2052 133 0 0 chr20 22159242 22159535 -49994347 - AluSx SINE Alu -19 293 1 1740 133 41 4 chr20 22159566 22159837 -49994045 + AluJo SINE Alu 1 281 -31 23 0 0 0 chr20 22160526 22160549 -49993333 + AT_rich Low_complexity Low_complexity 1 23 0 1517 154 38 10 chr20 22160706 22160998 -49992884 - L1MA4 LINE L1 -4 6296 5997 1847 162 0 0 chr20 22161081 22161383 -49992499 - AluSx SINE Alu -8 304 3 1970 118 7 0 chr20 22161387 22161676 -49992206 - AluSp SINE Alu -22 291 1 381 230 0 0 chr20 22161687 22161761 -49992121 + MLT1D LTR MaLR 115 188 -317 1149 148 38 5 chr20 22161762 22161971 -49991911 + AluSg/x SINE Alu 84 299 -11 685 165 5 10 chr20 22161971 22162165 -49991717 + GA-rich Low_complexity Low_complexity 1 193 0 2224 87 0 3 chr20 22162177 22162475 -49991407 + AluSx SINE Alu 5 301 -11 1327 223 32 10 chr20 22162476 22162785 -49991097 + MLT1D LTR MaLR 188 503 -2 288 134 30 75 chr20 22162788 22162855 -49991027 - L1MC3 LINE L1 -678 7107 7044 322 263 62 62 chr20 22162915 22163075 -49990807 - HAL1b LINE L1 -417 931 772 537 232 107 30 chr20 22163843 22164032 -49989850 + L1M4 LINE L1 2860 3076 -3070 1531 160 35 42 chr20 22164032 22164174 -49989708 + AluJo SINE Alu 1 142 -170 2265 99 0 0 chr20 22164174 22164477 -49989405 + AluSx SINE Alu 1 303 -9 1531 160 35 42 chr20 22164477 22164646 -49989236 + AluJo SINE Alu 142 310 -2 537 232 107 30 chr20 22164646 22164719 -49989163 + L1M4 LINE L1 3076 3142 -3004 1185 212 43 64 chr20 22164810 22165183 -49988699 - MLT1A1 LTR MaLR 0 365 1 2231 109 0 0 chr20 22165204 22165516 -49988366 - AluSx SINE Alu 0 312 1 189 388 62 6 chr20 22165540 22165700 -49988182 + L2 LINE L2 2687 2855 -459 658 261 90 25 chr20 22165791 22166043 -49987839 + MLT1J2 LTR MaLR 65 329 -121 520 304 84 87 chr20 22166040 22166166 -49987716 - MLT1K LTR MaLR -179 409 284 * 2128 125 3 3 chr20 22166166 22166478 -49987404 + AluSx SINE Alu 1 312 0 520 304 84 87 chr20 22166478 22166686 -49987196 - MLT1K LTR MaLR -304 284 76 999 308 165 18 chr20 22167011 22167885 -49985997 - L2 LINE L2 -223 3049 2032 832 175 94 12 chr20 22167917 22168088 -49985794 - MER5A DNA MER1_type -4 185 1 537 263 138 76 chr20 22168096 22168568 -49985314 - L2 LINE L2 -1525 1789 1289 233 167 37 37 chr20 22168585 22168639 -49985243 + MER3 DNA MER1_type 12 65 -144 * 395 247 0 0 chr20 22168628 22168717 -49985165 - MER3 DNA MER1_type -25 184 96 427 336 32 9 chr20 22168783 22169003 -49984879 - L2 LINE L2 -2102 1212 988 446 194 62 39 chr20 22169030 22169159 -49984723 + L1MC5 LINE L1 7049 7180 -781 2234 87 7 0 chr20 22169164 22169463 -49984419 + AluSp SINE Alu 1 301 -12 252 264 77 0 chr20 22169465 22169556 -49984326 + L1MC5 LINE L1 7346 7443 -518 921 222 50 61 chr20 22169677 22169938 -49983944 + MLT1A1 LTR MaLR 40 297 -68 1329 158 9 4 chr20 22169951 22170179 -49983703 + AluJb SINE Alu 1 229 -83 293 136 106 0 chr20 22170193 22170259 -49983623 + MLT1A1 LTR MaLR 383 455 -2 2090 115 14 0 chr20 22170286 22170581 -49983301 + AluSx SINE Alu 1 299 -13 2018 127 0 0 chr20 22170584 22170891 -49982991 + AluSq SINE Alu 1 307 0 365 306 64 17 chr20 22170954 22171127 -49982755 - L1MC/D LINE L1 -2097 5711 5531 305 229 125 78 chr20 22171653 22171845 -49982037 - L1MDa LINE L1 -5110 1430 1230 2051 80 3 80 chr20 22171852 22172189 -49981693 - AluSx SINE Alu -1 311 1 314 221 118 37 chr20 22172195 22172210 -49981672 - L1MA10 LINE L1 -3 6331 6317 1739 222 45 138 chr20 22172210 22172900 -49980982 - L1ME2 LINE L1 -9 6155 5582 1823 170 0 6 chr20 22172900 22173212 -49980670 - AluJb SINE Alu -2 310 1 1739 222 45 138 chr20 22173212 22173567 -49980315 - L1ME2 LINE L1 -582 5582 5195 30 0 0 0 chr20 22173666 22173696 -49980186 + AT_rich Low_complexity Low_complexity 1 30 0 594 90 27 99 chr20 22173697 22173768 -49980114 - U6 snRNA snRNA -4 103 41 1864 129 42 0 chr20 22173768 22174055 -49979827 - AluSx SINE Alu -13 299 1 594 90 27 99 chr20 22174055 22174094 -49979788 - U6 snRNA snRNA -66 41 1 497 205 27 36 chr20 22174781 22174857 -49979025 + MER5A DNA MER1_type 3 77 -112 678 180 66 60 chr20 22174857 22175040 -49978842 - MER5A DNA MER1_type -3 186 3 262 266 85 21 chr20 22175046 22175140 -49978742 - MER5B DNA MER1_type -78 100 1 3091 200 84 40 chr20 22175663 22175903 -49977979 - L1ME3 LINE L1 -1 6161 5933 1716 167 0 28 chr20 22175903 22176221 -49977661 - AluJo SINE Alu -3 309 1 3091 200 84 40 chr20 22176221 22176703 -49977179 - L1ME3 LINE L1 -229 5933 5397 2084 118 0 3 chr20 22176703 22177000 -49976882 - AluSx SINE Alu -16 296 1 3091 200 84 40 chr20 22177000 22177085 -49976797 - L1ME3 LINE L1 -765 5397 5317 251 333 0 0 chr20 22177232 22177310 -49976572 + L2 LINE L2 3189 3266 -6 2015 142 0 0 chr20 22177935 22178237 -49975645 - AluSx SINE Alu -10 302 1 635 107 0 0 chr20 22178593 22178677 -49975205 - AluS SINE Alu -227 85 2 972 144 33 28 chr20 22179081 22179232 -49974650 + MER3 DNA MER1_type 1 150 -59 219 69 0 0 chr20 22179232 22179261 -49974621 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 1137 192 137 16 chr20 22179261 22179516 -49974366 - AluJo SINE Alu -16 286 1 972 144 33 28 chr20 22179516 22179543 -49974339 + MER3 DNA MER1_type 149 181 -28 27 0 0 0 chr20 22179565 22179592 -49974290 + AT_rich Low_complexity Low_complexity 1 27 0 3070 112 14 40 chr20 22179593 22180093 -49973789 - L1MA6 LINE L1 -7 6293 5807 706 243 41 34 chr20 22180182 22180431 -49973451 + MIR SINE MIR 8 251 -11 2836 184 43 30 chr20 22180639 22181249 -49972633 - L1MC4 LINE L1 -22 8020 7403 300 227 133 16 chr20 22181535 22181663 -49972219 - L1ME4a LINE L1 -3 6118 5976 983 167 0 90 chr20 22182501 22182668 -49971214 - AluJo SINE Alu -16 296 154 2334 75 3 7 chr20 22182668 22182974 -49970908 - AluSp SINE Alu -8 305 1 983 167 0 90 chr20 22182974 22183039 -49970843 - AluJo SINE Alu -158 154 85 732 173 24 0 chr20 22183039 22183166 -49970716 - AluJo SINE Alu -62 250 121 865 171 0 0 chr20 22183188 22183328 -49970554 - AluJo SINE Alu -167 145 6 281 280 59 51 chr20 22183339 22183457 -49970425 - MIR SINE MIR -15 247 129 1872 118 88 6 chr20 22183694 22184023 -49969859 - L1MB2 LINE L1 -2 6169 5814 999 99 0 0 chr20 22184024 22184155 -49969727 - AluSg SINE Alu -179 131 1 6846 125 8 2 chr20 22184155 22186082 -49967800 - L1MA3 LINE L1 -119 6186 4249 2109 125 3 3 chr20 22186086 22186399 -49967483 - AluSq SINE Alu 0 313 1 762 186 0 0 chr20 22186442 22186560 -49967322 - FLAM_C SINE Alu -15 118 1 942 177 0 0 chr20 22186561 22186719 -49967163 - L1MB2 LINE L1 -415 5756 5599 415 217 11 11 chr20 22186719 22186811 -49967071 + LTR16C LTR ERVL 394 485 -6 981 212 186 65 chr20 22186862 22187385 -49966497 - MLT1G1 LTR MaLR -9 586 1 280 250 31 0 chr20 22187385 22187449 -49966433 - MIR SINE MIR -189 73 8 543 322 131 59 chr20 22187600 22187754 -49966128 + L3 LINE CR1 202 344 -1233 1795 221 45 22 chr20 22187754 22188248 -49965634 + MLT1D LTR MaLR 1 505 0 543 322 131 59 chr20 22188248 22188342 -49965540 + L3 LINE CR1 344 430 -1147 678 203 23 0 chr20 22188342 22188470 -49965412 - FLAM_A SINE Alu -2 131 1 543 322 131 59 chr20 22188470 22189046 -49964836 + L3 LINE CR1 430 1086 -491 281 221 88 0 chr20 22189120 22189188 -49964694 + LTR33 LTR ERVL 17 90 -431 2095 177 131 23 chr20 22189191 22189678 -49964204 - MLT1F LTR MaLR -2 540 1 1950 128 0 0 chr20 22190167 22190469 -49963413 + AluSx SINE Alu 1 302 0 497 312 56 32 chr20 22191646 22192110 -49961772 + LTR33 LTR ERVL 13 512 -9 328 291 146 0 chr20 22193054 22193157 -49960725 - MIR SINE MIR -105 157 40 414 297 131 46 chr20 22193237 22193671 -49960211 - LTR33 LTR ERVL -4 517 47 1671 161 4 4 chr20 22194091 22194371 -49959511 - AluJo SINE Alu -20 292 13 417 270 50 0 chr20 22194420 22194579 -49959303 - LTR16C LTR ERVL -25 466 300 965 198 11 6 chr20 22195659 22195836 -49958046 + MER45A DNA AcHobo 1 178 0 2400 89 0 0 chr20 22195963 22196255 -49957627 - AluSq SINE Alu -21 292 1 23 0 0 0 chr20 22196313 22196336 -49957546 + AT_rich Low_complexity Low_complexity 1 23 0 315 261 29 32 chr20 22196339 22196512 -49957370 - HAL1b LINE L1 -5 1343 1218 368 292 52 105 chr20 22196526 22196796 -49957086 - L1ME4a LINE L1 -157 5964 5710 2246 128 0 0 chr20 22196796 22197101 -49956781 + AluSx SINE Alu 3 307 -5 368 292 52 105 chr20 22197101 22197135 -49956747 - L1ME4a LINE L1 -411 5710 5676 857 147 14 14 chr20 22197379 22197522 -49956360 - FLAM_C SINE Alu 0 143 1 212 253 67 27 chr20 22197693 22197768 -49956114 + L2 LINE L2 3194 3271 -1 2538 83 0 3 chr20 22197778 22198091 -49955791 + AluSq SINE Alu 1 312 -1 1180 273 8 31 chr20 22198373 22198757 -49955125 - L1ME2 LINE L1 -10 6154 5780 760 316 73 21 chr20 22199183 22199651 -49954231 + L2 LINE L2 2047 2538 -776 2173 204 22 67 chr20 22199653 22199704 -49954178 - L1MA10 LINE L1 0 6334 6282 2297 113 3 0 chr20 22199704 22200004 -49953878 - AluSx SINE Alu -11 301 1 2173 204 22 67 chr20 22200004 22200502 -49953380 - L1MA10 LINE L1 -52 6282 5844 1829 175 3 13 chr20 22200502 22200811 -49953071 - AluJo SINE Alu -6 306 1 2173 204 22 67 chr20 22200811 22201003 -49952879 - L1MA10 LINE L1 -490 5844 5645 264 215 31 0 chr20 22201052 22201117 -49952765 + MER53 DNA DNA 105 171 -18 1651 166 87 11 chr20 22201647 22201924 -49951958 + AluJb SINE Alu 1 298 -14 244 235 265 10 chr20 22202531 22202629 -49951253 + L2 LINE L2 3134 3256 -16 945 218 0 24 chr20 22202854 22203065 -49950817 - MIR SINE MIR -55 207 2 1950 170 0 0 chr20 22204065 22204354 -49949528 - AluJo SINE Alu -23 289 1 282 159 0 0 chr20 22204458 22204502 -49949380 + L2 LINE L2 3209 3252 -20 1699 150 21 31 chr20 22205524 22205810 -49948072 - AluJb SINE Alu -13 299 17 1064 170 150 20 chr20 22206073 22206414 -49947468 + LTR37A LTR ERV1 40 424 -2 1701 141 47 36 chr20 22206563 22206839 -49947043 + AluJo SINE Alu 1 279 -33 209 350 0 0 chr20 22206994 22207074 -49946808 - MIR3 SINE MIR -9 199 120 272 200 62 75 chr20 22208011 22208091 -49945791 - MIR SINE MIR -73 189 111 503 208 9 9 chr20 22208631 22208737 -49945145 + MIR SINE MIR 100 205 -57 1213 223 103 3 chr20 22209661 22209980 -49943902 + LTR16C LTR ERVL 136 486 -5 665 293 24 48 chr20 22210595 22210844 -49943038 - MIR SINE MIR 0 262 20 2564 70 0 16 chr20 22211457 22211770 -49942112 + AluY SINE Alu 1 308 -3 770 249 33 5 chr20 22212028 22212241 -49941641 + MER20 DNA MER1_type 1 219 0 918 204 73 19 chr20 22212553 22212759 -49941123 - MER20 DNA MER1_type -1 218 2 222 233 0 0 chr20 22212815 22212858 -49941024 + L2 LINE L2 3261 3303 -10 2182 87 28 3 chr20 22212929 22213217 -49940665 - AluSp SINE Alu -18 295 1 1007 259 28 58 chr20 22213998 22214361 -49939521 - MLT1G1 LTR MaLR -243 352 1 186 133 0 0 chr20 22214697 22214727 -49939155 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 748 275 99 20 chr20 22215357 22215659 -49938223 - L2 LINE L2 0 3313 2988 2177 134 7 0 chr20 22215730 22216037 -49937845 + AluSx SINE Alu 1 309 -3 1392 256 119 20 chr20 22216200 22216736 -49937146 + MLT1E LTR MaLR 5 593 0 453 116 0 0 chr20 22218700 22218769 -49935113 + (CA)n Simple_repeat Simple_repeat 1 69 0 318 321 91 32 chr20 22218780 22218967 -49934915 - MIR SINE MIR -19 243 46 315 183 56 0 chr20 22219128 22219199 -49934683 + MLT1J LTR MaLR 418 492 -19 212 239 28 28 chr20 22219318 22219389 -49934493 + L2 LINE L2 2987 3057 -215 526 244 114 42 chr20 22219553 22219746 -49934136 + MER63A DNA MER1_type 4 210 0 1482 199 143 44 chr20 22219905 22220402 -49933480 + MLT1H LTR MaLR 4 549 0 303 28 0 0 chr20 22220836 22220872 -49933010 + (TTA)n Simple_repeat Simple_repeat 2 37 0 216 235 0 0 chr20 22221153 22221204 -49932678 + MIR SINE MIR 71 121 -87 197 299 45 0 chr20 22221460 22221527 -49932355 + MIR SINE MIR 68 137 -71 504 72 0 0 chr20 22221527 22221596 -49932286 + (TCCC)n Simple_repeat Simple_repeat 3 71 0 1944 175 0 6 chr20 22221596 22221942 -49931940 - AluJb SINE Alu 0 344 1 192 303 17 101 chr20 22222268 22222307 -49931575 + MIR SINE MIR 153 194 -68 2327 83 0 0 chr20 22222307 22222619 -49931263 + AluY SINE Alu 1 311 0 192 303 17 101 chr20 22222619 22222698 -49931184 + MIR SINE MIR 194 261 -1 683 241 87 46 chr20 22223021 22223384 -49930498 + LTR33A LTR ERVL 3 446 -77 16082 118 29 49 chr20 22223384 22224481 -49929401 + Tigger2 DNA MER2_type 1 1119 -1599 2347 74 44 0 chr20 22224481 22224779 -49929103 + AluY SINE Alu 1 311 0 16082 118 29 49 chr20 22224779 22225866 -49928016 + Tigger2 DNA MER2_type 1119 2120 -598 2258 122 7 0 chr20 22225866 22226162 -49927720 + AluSx SINE Alu 1 298 -14 16082 118 29 49 chr20 22226162 22226747 -49927135 + Tigger2 DNA MER2_type 2120 2715 -3 1479 218 135 48 chr20 22226975 22227470 -49926412 + MLT1H LTR MaLR 1 538 -11 385 289 40 33 chr20 22228120 22228272 -49925610 - MER115 DNA AcHobo -530 163 11 203 200 0 20 chr20 22229060 22229110 -49924772 - MIR SINE MIR -69 139 91 366 294 10 10 chr20 22229570 22229879 -49924003 + (TG)n Simple_repeat Simple_repeat 1 309 0 1861 146 45 0 chr20 22230125 22230413 -49923469 + AluJb SINE Alu 1 301 -11 224 59 29 0 chr20 22230660 22230694 -49923188 + (TTG)n Simple_repeat Simple_repeat 1 35 0 188 311 0 67 chr20 22230763 22230882 -49923000 + MIR SINE MIR 47 157 -105 222 267 0 17 chr20 22230882 22230942 -49922940 + (TG)n Simple_repeat Simple_repeat 2 60 0 244 222 63 0 chr20 22230944 22231007 -49922875 + MIR SINE MIR 118 184 -78 815 282 158 18 chr20 22231028 22231485 -49922397 + LTR33A LTR ERVL 3 523 0 1370 120 0 16 chr20 22231667 22231838 -49922044 - AluSc SINE Alu -7 302 133 2199 104 0 10 chr20 22231838 22232156 -49921726 - AluY SINE Alu 0 311 1 1370 120 0 16 chr20 22232156 22232175 -49921707 - AluSc SINE Alu -176 133 115 284 260 180 27 chr20 22232177 22232327 -49921555 + MIR SINE MIR 6 178 -84 836 186 103 0 chr20 22232354 22232471 -49921411 + AluJo SINE Alu 1 137 -175 899 81 23 29 chr20 22232471 22232643 -49921239 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 836 186 103 0 chr20 22232643 22232670 -49921212 + AluJo SINE Alu 137 160 -152 245 246 29 14 chr20 22232670 22232739 -49921143 - MIR SINE MIR -162 100 31 857 174 7 7 chr20 22232740 22232895 -49920987 + AluJo SINE Alu 157 311 -1 208 299 81 11 chr20 22233233 22233320 -49920562 + L2 LINE L2 2928 3020 -252 270 312 138 0 chr20 22233527 22233636 -49920246 - MIR SINE MIR -19 243 120 194 355 65 16 chr20 22233685 22233809 -49920073 + L2 LINE L2 3142 3271 -1 1017 99 44 22 chr20 22234825 22235006 -49918876 - MER53 DNA DNA -1 188 4 286 244 47 12 chr20 22235588 22235674 -49918208 + MER5B DNA MER1_type 33 121 -57 2075 117 20 13 chr20 22235694 22235992 -49917890 + AluSx SINE Alu 1 300 -12 742 228 75 31 chr20 22236041 22236295 -49917587 + LTR16C LTR ERVL 201 465 -26 266 340 90 21 chr20 22236382 22236570 -49917312 + MIR SINE MIR 20 220 -42 214 255 20 0 chr20 22236989 22237040 -49916842 + L2 LINE L2 3210 3261 -11 203 343 0 37 chr20 22237550 22237684 -49916198 - MIR SINE MIR -28 234 106 614 263 43 60 chr20 22238656 22238957 -49914925 - LTR16A1 LTR ERVL -3 454 159 217 218 36 82 chr20 22239066 22239105 -49914777 + MIR SINE MIR 110 149 -113 2329 101 0 3 chr20 22239105 22239402 -49914480 + AluSg SINE Alu 1 296 -14 217 218 36 82 chr20 22239402 22239472 -49914410 + MIR SINE MIR 149 214 -48 2278 114 10 3 chr20 22239634 22239940 -49913942 + AluSx SINE Alu 1 308 -4 550 236 32 83 chr20 22240193 22240409 -49913473 + Charlie8 DNA MER1_type 3 207 -2210 1089 322 89 32 chr20 22242445 22242930 -49910952 - L1MC4a LINE L1 -894 5252 5305 2262 102 7 0 chr20 22242930 22243224 -49910658 + AluSx SINE Alu 1 296 -16 1089 322 89 32 chr20 22243224 22243637 -49910245 - L1MC4a LINE L1 -840 5306 4918 2281 125 0 0 chr20 22243650 22243953 -49909929 - AluSx SINE Alu -9 303 1 6691 112 42 16 chr20 22244037 22245152 -49908730 - Tigger3b DNA MER2_type 0 1231 88 570 165 0 0 chr20 22245152 22245249 -49908633 - AluJb SINE Alu -12 300 204 342 135 0 0 chr20 22245249 22245301 -49908581 - Tigger3b DNA MER2_type -1139 92 41 232 302 103 17 chr20 22245705 22245821 -49908061 - MIR SINE MIR -117 145 20 376 219 219 0 chr20 22246745 22246859 -49907023 - L1MC4 LINE L1 0 8042 7904 237 225 8 16 chr20 22246880 22246990 -49906892 + CT-rich Low_complexity Low_complexity 1 109 0 1875 173 10 0 chr20 22247004 22247305 -49906577 - AluJo SINE Alu -8 304 1 387 334 92 18 chr20 22247311 22247703 -49906179 - L1MC4 LINE L1 -142 7900 7480 1785 163 147 3 chr20 22247703 22248077 -49905805 - MSTC LTR MaLR 0 428 1 1828 167 7 7 chr20 22248144 22248431 -49905451 - AluJo SINE Alu -24 288 2 325 292 230 26 chr20 22248618 22249070 -49904812 + L2 LINE L2 2711 3272 0 589 197 197 7 chr20 22250021 22250168 -49903714 - MER5B DNA MER1_type -3 175 1 429 274 44 18 chr20 22250232 22250345 -49903537 + MER91C DNA MER1_type 1 116 -24 35 0 0 0 chr20 22250532 22250567 -49903315 + AT_rich Low_complexity Low_complexity 1 35 0 902 296 139 7 chr20 22250823 22251282 -49902600 + MLT1G1 LTR MaLR 76 595 0 222 37 0 0 chr20 22251454 22251481 -49902401 + (TG)n Simple_repeat Simple_repeat 2 28 0 283 286 48 62 chr20 22251512 22251722 -49902160 - HAL1 LINE L1 -56 2451 2245 308 342 0 51 chr20 22251751 22251868 -49902014 - HAL1b LINE L1 -418 930 820 451 243 53 46 chr20 22252120 22252468 -49901414 + LTR33 LTR ERVL 106 512 -9 517 255 120 13 chr20 22252478 22252740 -49901142 - LTR16A LTR ERVL -13 437 106 401 190 51 0 chr20 22252875 22252954 -49900928 + L2 LINE L2 3229 3311 -2 628 230 59 81 chr20 22253050 22253372 -49900510 - L1MC4 LINE L1 0 8042 7728 371 207 111 30 chr20 22253433 22253568 -49900314 - L1MC4 LINE L1 -441 7601 7456 222 246 87 14 chr20 22253660 22253729 -49900153 - MIR SINE MIR -84 124 51 332 266 113 8 chr20 22254533 22254657 -49899225 + MIR SINE MIR 56 192 -70 192 94 31 0 chr20 22255236 22255268 -49898614 + L2 LINE L2 2713 2745 -569 2076 154 70 0 chr20 22255293 22255662 -49898220 + MER57A LTR ERV1 8 402 -1 1815 129 39 4 chr20 22255734 22256014 -49897868 - AluSx SINE Alu -22 290 1 2564 81 0 0 chr20 22256139 22256449 -49897433 - AluY SINE Alu -1 310 1 243 299 131 0 chr20 22256449 22256548 -49897334 + L2 LINE L2 2921 3036 -236 604 280 93 0 chr20 22256628 22256810 -49897072 - MER63A DNA MER1_type -11 199 1 1885 270 42 13 chr20 22257158 22257684 -49896198 + MLT1H1 LTR MaLR 1 541 -14 592 264 6 31 chr20 22257694 22257829 -49896053 - MIR SINE MIR -25 237 105 1537 164 117 33 chr20 22257829 22258189 -49895693 + MLT1B LTR MaLR 1 390 0 592 264 6 31 chr20 22258189 22258212 -49895670 - MIR SINE MIR -157 105 83 1756 299 57 26 chr20 22258212 22258399 -49895483 + MER115 DNA AcHobo 1 181 -512 1860 177 0 13 chr20 22258399 22258704 -49895178 - AluJo SINE Alu -11 301 1 1756 299 57 26 chr20 22258704 22259165 -49894717 + MER115 DNA AcHobo 181 669 -24 1095 118 106 0 chr20 22259312 22259473 -49894409 + FRAM SINE Alu 1 174 -2 1014 237 134 44 chr20 22261117 22261579 -49892303 - MLT1D LTR MaLR -3 502 7 249 213 160 27 chr20 22261671 22261746 -49892136 + MIR3 SINE MIR 108 192 -16 717 99 0 92 chr20 22261844 22261891 -49891991 - L1MB4 LINE L1 -2 6178 6128 1685 146 91 11 chr20 22261891 22262166 -49891716 - AluJo SINE Alu -15 297 1 717 99 0 92 chr20 22262166 22262249 -49891633 - L1MB4 LINE L1 -52 6128 6060 791 207 56 0 chr20 22262529 22262708 -49891174 + MER5A DNA MER1_type 1 189 0 309 324 48 0 chr20 22262843 22262988 -49890894 + Charlie8 DNA MER1_type 5 156 -2261 1408 127 15 50 chr20 22263204 22263503 -49890379 + MLT2D LTR ERVL 1 377 -37 359 73 18 0 chr20 22263503 22263558 -49890324 + (CA)n Simple_repeat Simple_repeat 1 56 0 1408 127 15 50 chr20 22263558 22263593 -49890289 + MLT2D LTR ERVL 377 412 -2 2272 99 3 0 chr20 22263797 22264104 -49889778 - AluSp SINE Alu 0 308 1 702 242 58 54 chr20 22264123 22264179 -49889703 - MIR SINE MIR 0 262 208 2335 107 3 0 chr20 22264179 22264477 -49889405 - AluSx SINE Alu -13 299 1 702 242 58 54 chr20 22264477 22264680 -49889202 - MIR SINE MIR -54 208 2 479 174 80 14 chr20 22264933 22265071 -49888811 + L1ME2 LINE L1 5779 5925 -239 * 2092 217 45 32 chr20 22265065 22265622 -49888260 + L1MD3 LINE L1 7422 7985 -10 348 232 12 12 chr20 22267050 22267132 -49886750 - LTR16C LTR ERVL -11 480 399 610 208 197 22 chr20 22268182 22268360 -49885522 + MER3 DNA MER1_type 1 209 0 322 312 46 9 chr20 22268720 22268829 -49885053 - MIR SINE MIR -62 146 34 191 255 160 43 chr20 22269177 22269271 -49884611 + L3b LINE CR1 1358 1462 -121 257 197 76 15 chr20 22269568 22269634 -49884248 - MER5C DNA MER1_type -3 321 252 231 279 33 0 chr20 22269736 22269797 -49884085 - MER5C DNA MER1_type -200 124 62 1067 192 70 96 chr20 22269815 22270158 -49883724 + MER58B DNA MER1_type 5 338 -3 228 308 8 26 chr20 22270827 22270944 -49882938 + CT-rich Low_complexity Low_complexity 3 117 0 238 276 35 0 chr20 22271093 22271151 -49882731 - L2 LINE L2 -96 3176 3117 1799 154 10 13 chr20 22271168 22271466 -49882416 - AluJo SINE Alu -15 297 1 3842 157 30 30 chr20 22271483 22271728 -49882154 - L1MA7 LINE L1 -1 6290 6046 2536 65 3 0 chr20 22271728 22272037 -49881845 + AluY SINE Alu 1 310 -1 3842 157 30 30 chr20 22272037 22272473 -49881409 - L1MA7 LINE L1 -245 6046 5606 2335 72 0 26 chr20 22272473 22272779 -49881103 - AluY SINE Alu -13 298 1 3842 157 30 30 chr20 22272779 22272852 -49881030 - L1MA7 LINE L1 -684 5607 5535 389 283 187 27 chr20 22273088 22273388 -49880494 - L2 LINE L2 -559 2755 2408 258 167 17 17 chr20 22273397 22273457 -49880425 - MLT1I LTR MaLR -25 384 325 790 259 122 75 chr20 22274095 22274547 -49879335 - MLT1J LTR MaLR -38 473 1 396 0 0 0 chr20 22274555 22274599 -49879283 + (TG)n Simple_repeat Simple_repeat 2 45 0 259 333 36 14 chr20 22274610 22274748 -49879134 + MIR3 SINE MIR 3 143 -65 24 0 0 0 chr20 22274823 22274847 -49879035 + AT_rich Low_complexity Low_complexity 1 24 0 733 271 108 55 chr20 22275075 22275584 -49878298 - MLT1F LTR MaLR -6 536 1 597 229 23 57 chr20 22275584 22275759 -49878123 - MER5B DNA MER1_type -9 169 1 501 203 57 63 chr20 22276911 22277069 -49876813 + LTR33A LTR ERVL 6 162 -361 543 291 122 0 chr20 22277170 22277366 -49876516 + LTR33A LTR ERVL 304 523 0 513 359 63 41 chr20 22277379 22277696 -49876186 - L3 LINE CR1 -265 1312 985 1274 202 153 9 chr20 22277696 22278023 -49875859 - MLT1A2 LTR MaLR 0 374 1 513 359 63 41 chr20 22278023 22278067 -49875815 - L3 LINE CR1 -592 985 943 335 125 18 0 chr20 22278097 22278186 -49875696 - AluSq SINE Alu 0 315 226 1291 143 0 0 chr20 22278187 22278362 -49875520 - AluSq SINE Alu -138 175 1 355 343 22 59 chr20 22278376 22278647 -49875235 - L3 LINE CR1 -689 888 628 1102 273 19 29 chr20 22278933 22279310 -49874572 - LTR16C LTR ERVL -16 475 103 621 275 65 16 chr20 22279412 22279670 -49874212 + MLT1L LTR MaLR 246 596 -19 232 196 22 0 chr20 22279759 22279805 -49874077 + LTR16C LTR ERVL 445 491 0 545 222 161 24 chr20 22280010 22280258 -49873624 - MLT1K LTR MaLR -4 584 303 681 226 0 0 chr20 22280622 22280746 -49873136 + FLAM_A SINE Alu 5 128 -5 484 281 61 101 chr20 22280772 22281167 -49872715 - LTR16C LTR ERVL -30 461 83 315 300 56 0 chr20 22281964 22282054 -49871828 + MIR3 SINE MIR 63 157 -51 479 262 71 12 chr20 22282073 22282241 -49871641 - MER117 DNA MER1_type -19 178 1 1153 179 5 28 chr20 22282302 22282520 -49871362 + MER58A DNA MER1_type 1 213 -11 1188 220 124 14 chr20 22283523 22283878 -49870004 - REP3 LTR ERV -80 482 89 2073 144 161 7 chr20 22283887 22284317 -49869565 - MLT1D LTR MaLR -9 496 1 477 213 0 0 chr20 22284317 22284410 -49869472 - REP3 LTR ERV -469 93 1 323 296 21 7 chr20 22284410 22284518 -49869364 + LTR16A1 LTR ERVL 299 408 -49 292 314 57 0 chr20 22284770 22284875 -49869007 - LTR16B LTR ERVL -263 201 91 410 274 44 44 chr20 22284939 22285143 -49868739 - L2 LINE L2 -529 2785 2582 903 194 7 0 chr20 22285458 22285613 -49868269 + FRAM SINE Alu 1 153 -23 469 145 7 179 chr20 22285640 22285785 -49868097 + MER5A DNA MER1_type 70 189 0 787 214 26 13 chr20 22285792 22285946 -49867936 + MER5B DNA MER1_type 23 178 0 2253 111 0 3 chr20 22286205 22286502 -49867380 + AluSg SINE Alu 1 296 -14 297 231 86 0 chr20 22287399 22287516 -49866366 - LTR16C LTR ERVL -3 488 362 475 322 7 7 chr20 22287822 22287965 -49865917 + MIR SINE MIR 46 188 -74 3368 176 43 61 chr20 22287977 22288301 -49865581 + L1MB5 LINE L1 4922 5250 -924 2284 80 19 32 chr20 22288301 22288612 -49865270 - AluY SINE Alu -4 307 1 3368 176 43 61 chr20 22288612 22289410 -49864472 + L1MB5 LINE L1 5250 6033 -141 283 235 184 10 chr20 22289763 22289861 -49864021 - L2 LINE L2 -21 3251 3137 180 0 0 0 chr20 22289979 22289999 -49863883 + (GGGTG)n Simple_repeat Simple_repeat 5 24 0 368 329 150 21 chr20 22290208 22290494 -49863388 + LTR16C LTR ERVL 169 491 0 190 256 0 120 chr20 22291048 22291165 -49862717 - MIR SINE MIR -74 134 32 246 128 0 0 chr20 22291579 22291618 -49862264 + (TG)n Simple_repeat Simple_repeat 2 40 0 2060 150 40 0 chr20 22291789 22292089 -49861793 - AluSx SINE Alu 0 312 1 865 264 20 0 chr20 22292213 22292410 -49861472 + MER63A DNA MER1_type 1 201 -9 318 377 23 8 chr20 22292426 22292556 -49861326 - MIR SINE MIR -55 153 22 245 288 45 68 chr20 22292626 22292758 -49861124 + L2 LINE L2 2935 3063 -250 277 200 0 0 chr20 22292951 22293001 -49860881 - L2 LINE L2 -1 3312 3263 380 130 7 20 chr20 22293221 22293298 -49860584 - MLT1G1 LTR MaLR 0 595 466 1225 208 118 10 chr20 22293608 22293921 -49859961 - L1ME1 LINE L1 -4 6162 5816 230 275 14 43 chr20 22294327 22294396 -49859486 + MIR3 SINE MIR 93 159 -49 1042 292 35 44 chr20 22295516 22295948 -49857934 + L2 LINE L2 2886 3313 0 1406 141 168 32 chr20 22296059 22296399 -49857483 - LTR45B LTR ERV1 -101 388 3 314 349 52 23 chr20 22296401 22296573 -49857309 + MIR SINE MIR 20 196 -66 1939 193 40 24 chr20 22296592 22296924 -49856958 - MLT1C LTR MaLR -8 459 117 2666 118 41 14 chr20 22296924 22297341 -49856541 - MSTA LTR MaLR 0 428 1 1939 193 40 24 chr20 22297341 22297458 -49856424 - MLT1C LTR MaLR -350 117 3 204 49 49 49 chr20 22297472 22297513 -49856369 + (TTTTTA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr20 22297516 22297538 -49856344 + AT_rich Low_complexity Low_complexity 1 22 0 272 200 24 12 chr20 22297616 22297682 -49856200 + T-rich Low_complexity Low_complexity 5 74 -16 10762 50 47 8 chr20 22297682 22299013 -49854869 - SVA Other Other 0 1386 3 272 200 24 12 chr20 22299013 22299031 -49854851 + T-rich Low_complexity Low_complexity 74 90 0 723 208 46 20 chr20 22299048 22299245 -49854637 - MER33 DNA MER1_type -93 231 30 396 227 103 0 chr20 22300399 22300496 -49853386 - LTR16C LTR ERVL -17 474 368 707 105 142 110 chr20 22300517 22300755 -49853127 + LTR29 LTR ERV1 1 199 -423 698 197 48 71 chr20 22300765 22300907 -49852975 + LTR29 LTR ERV1 389 524 -98 2056 132 36 7 chr20 22300907 22301210 -49852672 - AluSx SINE Alu 0 312 1 698 197 48 71 chr20 22301210 22301307 -49852575 + LTR29 LTR ERV1 524 622 0 841 244 54 27 chr20 22301307 22301565 -49852317 - LTR16C LTR ERVL -152 339 75 373 308 83 60 chr20 22301654 22302298 -49851584 - L2 LINE L2 -51 3221 2554 2234 78 0 0 chr20 22302394 22302665 -49851217 - AluSc SINE Alu -4 305 35 869 251 127 35 chr20 22302801 22303140 -49850742 - L1ME3 LINE L1 -171 5991 5622 263 273 52 0 chr20 22303593 22303670 -49850212 + MER103 DNA DNA 3 83 -83 673 253 90 80 chr20 22304046 22304252 -49849630 + L2 LINE L2 2933 3146 -167 2141 130 0 0 chr20 22304252 22304552 -49849330 - AluJb SINE Alu -12 300 1 673 253 90 80 chr20 22304552 22304721 -49849161 + L2 LINE L2 3146 3312 -1 551 248 152 33 chr20 22305068 22305370 -49848512 - L1MC4a LINE L1 -1765 6043 5706 380 223 10 0 chr20 22305395 22305498 -49848384 + GA-rich Low_complexity Low_complexity 1 104 0 194 197 49 66 chr20 22305547 22305608 -49848274 - L2 LINE L2 -8 3305 3246 458 291 52 6 chr20 22306252 22306424 -49847458 - LTR16C LTR ERVL -112 379 200 1003 76 0 0 chr20 22306512 22306630 -49847252 + AluSg SINE Alu 13 130 -180 1836 125 88 6 chr20 22306630 22306959 -49846923 + L1MB2 LINE L1 5814 6169 -2 278 280 59 51 chr20 22307196 22307314 -49846568 + MIR SINE MIR 129 247 -15 938 171 0 0 chr20 22307325 22307465 -49846417 + AluJ SINE Alu 6 145 -167 750 181 24 0 chr20 22307487 22307614 -49846268 + AluJ SINE Alu 121 250 -62 1091 167 0 90 chr20 22307614 22307679 -49846203 + AluJo SINE Alu 85 154 -158 2462 73 3 7 chr20 22307679 22307981 -49845901 + AluSp SINE Alu 1 301 -12 1091 167 0 90 chr20 22307981 22308148 -49845734 + AluJo SINE Alu 154 296 -16 281 227 133 16 chr20 22308986 22309114 -49844768 + L1ME4a LINE L1 5976 6118 -3 2684 185 43 30 chr20 22309400 22310010 -49843872 + L1MC4 LINE L1 7403 8020 -22 720 243 41 34 chr20 22310218 22310467 -49843415 - MIR SINE MIR -11 251 8 3068 112 14 40 chr20 22310556 22311056 -49842826 + L1MA6 LINE L1 5807 6293 -7 27 0 0 0 chr20 22311057 22311084 -49842798 + AT_rich Low_complexity Low_complexity 1 27 0 919 144 33 28 chr20 22311106 22311133 -49842749 - MER3 DNA MER1_type -28 181 156 1180 192 137 16 chr20 22311133 22311388 -49842494 + AluJo SINE Alu 1 286 -16 219 69 0 0 chr20 22311388 22311417 -49842465 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 919 144 33 28 chr20 22311417 22311568 -49842314 - MER3 DNA MER1_type -52 157 1 669 95 0 0 chr20 22311972 22312056 -49841826 + AluS SINE Alu 2 85 -228 2166 142 0 0 chr20 22312408 22312710 -49841172 + AluSx SINE Alu 1 302 -10 255 333 0 0 chr20 22313335 22313413 -49840469 - L2 LINE L2 -6 3266 3189 2062 216 43 29 chr20 22313560 22313645 -49840237 + L1ME3 LINE L1 5317 5399 -763 2219 121 0 3 chr20 22313645 22313942 -49839940 + AluSx SINE Alu 1 296 -16 2062 216 43 29 chr20 22313942 22314415 -49839467 + L1ME3 LINE L1 5399 5883 -279 1860 168 0 28 chr20 22314424 22314745 -49839137 + AluJo SINE Alu 1 312 0 1020 169 4 64 chr20 22314746 22314982 -49838900 + L1ME3 LINE L1 5940 6161 -1 270 266 85 21 chr20 22315505 22315599 -49838283 + MER5B DNA MER1_type 1 100 -78 672 191 66 60 chr20 22315605 22315788 -49838094 + MER5A DNA MER1_type 3 186 -3 504 205 27 36 chr20 22315788 22315864 -49838018 - MER5A DNA MER1_type -112 77 3 596 90 27 99 chr20 22316551 22316590 -49837292 + U6 snRNA snRNA 1 41 -66 2009 129 42 0 chr20 22316590 22316877 -49837005 + AluSx SINE Alu 1 299 -13 596 90 27 99 chr20 22316877 22316948 -49836934 + U6 snRNA snRNA 41 103 -4 30 0 0 0 chr20 22316949 22316979 -49836903 + AT_rich Low_complexity Low_complexity 1 30 0 1654 229 37 11 chr20 22317078 22317433 -49836449 + L1ME2 LINE L1 5195 5561 -603 1982 170 0 6 chr20 22317433 22317745 -49836137 + AluJb SINE Alu 1 310 -2 1654 229 37 11 chr20 22317745 22317893 -49835989 + L1ME2 LINE L1 5561 5704 -460 1385 241 88 22 chr20 22317984 22318450 -49835432 + L1ME2 LINE L1 5678 6331 -3 2203 80 3 80 chr20 22318456 22318793 -49835089 + AluSx SINE Alu 1 311 -1 310 229 125 78 chr20 22318800 22318992 -49834890 + L1MDa LINE L1 1230 1430 -5110 335 306 64 17 chr20 22319550 22319723 -49834159 + L1MC4a LINE L1 5531 5711 -2097 2158 127 0 0 chr20 22319786 22320093 -49833789 - AluSq SINE Alu 0 307 1 2228 116 14 0 chr20 22320096 22320390 -49833492 - AluSx SINE Alu -14 298 1 278 81 177 0 chr20 22320417 22320479 -49833403 - MLT1A1 LTR MaLR -2 455 383 1436 158 9 4 chr20 22320497 22320725 -49833157 - AluJb SINE Alu -83 229 1 907 218 55 58 chr20 22320738 22321013 -49832869 - MLT1A1 LTR MaLR -68 297 24 343 248 44 29 chr20 22321060 22321197 -49832685 + L1MC4a LINE L1 5771 5909 -1899 2234 134 0 0 chr20 22321204 22321503 -49832379 - AluSx SINE Alu -13 299 1 1717 175 17 17 chr20 22321553 22321845 -49832037 + AluJb SINE Alu 1 292 -20 1075 154 0 0 chr20 22321876 22322025 -49831857 - AluSg/x SINE Alu -41 269 121 733 70 0 40 chr20 22322063 22322188 -49831694 + AluY SINE Alu 196 311 0 317 310 107 59 chr20 22322600 22322787 -49831095 + L1MC4a LINE L1 5989 6184 -1624 2211 90 4 0 chr20 22323674 22323952 -49829930 + AluSx SINE Alu 1 279 -33 180 77 0 0 chr20 22323952 22323978 -49829904 + (CA)n Simple_repeat Simple_repeat 1 26 0 734 161 240 65 chr20 22323978 22324238 -49829644 + MER41B LTR ERV1 105 443 -192 686 195 63 37 chr20 22324346 22324536 -49829346 + MER66A LTR ERV1 273 467 -11 586 264 128 16 chr20 22324544 22324794 -49829088 + L2 LINE L2 3035 3312 -1 1075 318 153 5 chr20 22324807 22325363 -49828519 - L2 LINE L2 -972 2342 1705 807 113 0 2 chr20 22325363 22325611 -49828271 + AluSx SINE Alu 1 308 -1 207 0 0 0 chr20 22325634 22325657 -49828225 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 607 235 0 7 chr20 22325660 22325809 -49828073 + L1MB2 LINE L1 4706 4853 -1293 1413 250 89 20 chr20 22325821 22326361 -49827521 - L1MC4 LINE L1 -21 8021 7445 732 308 56 90 chr20 22326367 22326814 -49827068 - L2 LINE L2 -1594 1720 1304 3203 155 44 34 chr20 22326814 22327111 -49826771 + L1MB2 LINE L1 5511 5803 -368 2341 120 3 0 chr20 22327111 22327419 -49826463 + AluSx SINE Alu 1 309 -3 3203 155 44 34 chr20 22327419 22327774 -49826108 + L1MB2 LINE L1 5803 6170 -1 732 308 56 90 chr20 22327774 22328024 -49825858 - L2 LINE L2 -2010 1304 1047 424 254 38 33 chr20 22328100 22328270 -49825612 + MLT1H LTR MaLR 64 276 -273 368 214 46 118 chr20 22328425 22328474 -49825408 - L1ME4a LINE L1 -220 5901 5850 2325 103 3 3 chr20 22328474 22328775 -49825107 + AluSx SINE Alu 1 301 -11 368 214 46 118 chr20 22328775 22328963 -49824919 - L1ME4a LINE L1 -271 5850 5681 902 271 67 45 chr20 22329128 22329169 -49824713 + MLT1H LTR MaLR 77 116 -433 2002 114 3 36 chr20 22329169 22329477 -49824405 + AluSx SINE Alu 1 298 -14 902 271 67 45 chr20 22329477 22329881 -49824001 + MLT1H LTR MaLR 116 532 -17 1699 198 13 49 chr20 22329920 22330040 -49823842 + L1MD1 LINE L1 2 125 -5920 1569 162 63 21 chr20 22330040 22330324 -49823558 + AluJb SINE Alu 1 296 -16 1699 198 13 49 chr20 22330324 22330591 -49823291 + L1MD1 LINE L1 125 302 -5743 2233 133 0 0 chr20 22330591 22330893 -49822989 - AluSx SINE Alu -10 302 1 1699 198 13 49 chr20 22330893 22330974 -49822908 + L1MD1 LINE L1 302 384 -5661 4047 161 26 12 chr20 22330976 22331714 -49822168 + L1MC1 LINE L1 5586 6333 0 2593 52 7 0 chr20 22331722 22332028 -49821854 + AluY SINE Alu 2 309 -2 857 243 45 19 chr20 22332029 22332408 -49821474 + L1MD1 LINE L1 3461 3849 -2715 483 135 11 34 chr20 22332424 22332513 -49821369 + AluJ/FRAM SINE Alu 218 304 -8 4203 200 49 35 chr20 22332518 22332973 -49820909 + L1MD1 LINE L1 4858 5305 -1355 2311 75 4 0 chr20 22332973 22333285 -49820597 + AluSg SINE Alu 1 313 0 4203 200 49 35 chr20 22333285 22333544 -49820338 + L1MD1 LINE L1 5305 5559 -1101 1937 167 3 0 chr20 22333544 22333831 -49820051 + AluJo SINE Alu 1 288 -24 399 41 0 0 chr20 22333832 22333881 -49820001 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4203 200 49 35 chr20 22333881 22334550 -49819332 + L1MD1 LINE L1 5559 6283 -377 1823 138 36 4 chr20 22334550 22334856 -49819026 + AluJb SINE Alu 1 315 0 4203 200 49 35 chr20 22334856 22335239 -49818643 + L1MD1 LINE L1 6283 6659 -1 334 261 32 70 chr20 22335217 22335377 -49818505 + HAL1 LINE L1 1487 1633 -1292 * 2324 188 50 45 chr20 22335377 22335810 -49818072 + MLT2B1 LTR ERVL 1 439 -81 2423 103 0 0 chr20 22335810 22336120 -49817762 + AluSx SINE Alu 1 310 -2 2324 188 50 45 chr20 22336120 22336203 -49817679 + MLT2B1 LTR ERVL 439 520 0 334 261 32 70 chr20 22336203 22336326 -49817556 + HAL1 LINE L1 1633 1759 -1166 398 283 42 0 chr20 22336399 22336444 -49817438 - HAL1 LINE L1 -2228 279 237 212 59 29 0 chr20 22336444 22336478 -49817404 + (CCCCCG)n Simple_repeat Simple_repeat 2 36 0 398 283 42 0 chr20 22336478 22336552 -49817330 - HAL1 LINE L1 -2270 237 155 381 332 41 32 chr20 22337157 22337377 -49816505 - L1MC4a LINE L1 -1867 5941 5720 940 247 39 48 chr20 22337401 22337668 -49816214 + MER5C DNA MER1_type 16 281 -43 2180 134 3 0 chr20 22337668 22337975 -49815907 + AluSx SINE Alu 3 310 -2 940 247 39 48 chr20 22337975 22338019 -49815863 + MER5C DNA MER1_type 281 324 0 206 283 38 0 chr20 22339095 22339148 -49814734 - L3 LINE CR1 -11 1566 1512 283 189 83 11 chr20 22339154 22339237 -49814645 + MIR SINE MIR 50 145 -63 869 271 43 8 chr20 22339363 22339618 -49814264 + LTR16C LTR ERVL 226 489 -2 2360 280 61 30 chr20 22340069 22341030 -49812852 + L1MC4a LINE L1 6789 7779 -29 264 327 72 20 chr20 22342234 22342387 -49811495 + MER5A DNA MER1_type 1 161 -28 246 203 58 29 chr20 22342775 22342844 -49811038 - MLT1K LTR MaLR -126 462 392 1506 135 0 9 chr20 22343621 22343843 -49810039 - AluJo SINE Alu -7 305 86 813 173 0 0 chr20 22343921 22344054 -49809828 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 22344114 22344144 -49809738 + (TG)n Simple_repeat Simple_repeat 2 31 0 207 256 120 105 chr20 22344329 22344462 -49809420 + MIR SINE MIR 11 145 -117 1411 230 74 9 chr20 22344467 22344846 -49809036 + MLT1H LTR MaLR 1 447 -102 2119 102 16 35 chr20 22344865 22345178 -49808704 + AluY SINE Alu 1 307 -4 905 231 156 54 chr20 22345218 22345591 -49808291 + L2 LINE L2 2903 3313 0 254 333 20 0 chr20 22346368 22346467 -49807415 - LTR16C LTR ERVL 0 491 391 414 287 0 19 chr20 22348116 22348224 -49805658 + MER5B DNA MER1_type 4 109 -69 231 260 130 14 chr20 22348235 22348381 -49805501 - L2 LINE L2 -338 2976 2814 517 202 13 178 chr20 22348396 22348548 -49805334 - MLT1G LTR MaLR -25 570 425 658 168 8 8 chr20 22348570 22348689 -49805193 - MER3 DNA MER1_type -5 204 86 981 111 7 0 chr20 22348704 22348839 -49805043 + AluJo SINE Alu 1 136 -176 734 205 58 0 chr20 22348860 22349031 -49804851 + MER53 DNA DNA 1 181 -8 335 268 12 0 chr20 22349043 22349125 -49804757 - MER3 DNA MER1_type -126 83 1 510 233 261 34 chr20 22349126 22349458 -49804424 - MLT1G1 LTR MaLR -208 382 10 424 271 68 17 chr20 22349468 22349645 -49804237 - L2 LINE L2 -492 2822 2637 1643 172 20 16 chr20 22351006 22351309 -49802573 + AluJo SINE Alu 9 312 0 575 230 143 0 chr20 22352644 22352805 -49801077 - AluJo SINE Alu -44 268 85 1570 117 102 30 chr20 22354155 22354421 -49799461 - MER1B DNA MER1_type -18 321 37 299 217 91 0 chr20 22354454 22354564 -49799318 + L1MC4 LINE L1 7464 7674 -321 945 128 0 0 chr20 22355866 22355999 -49797883 + AluSq/x SINE Alu 1 133 -180 3719 189 95 14 chr20 22356661 22357535 -49796347 + L1MA8 LINE L1 5347 6291 0 2590 53 0 0 chr20 22357636 22357935 -49795947 - AluY SINE Alu -12 299 1 22 35 0 0 chr20 22358696 22358725 -49795157 + AT_rich Low_complexity Low_complexity 1 29 0 1711 249 144 60 chr20 22359230 22360544 -49793338 + L1MC4 LINE L1 6521 8037 -5 352 70 0 0 chr20 22362817 22362860 -49791022 + MER4D LTR ERV1 760 802 -70 327 196 78 88 chr20 22363838 22363940 -49789942 + MER20 DNA MER1_type 66 166 -53 319 259 38 61 chr20 22364132 22364278 -49789604 - Charlie5 DNA MER1_type -2514 98 1 2509 74 0 0 chr20 22365032 22365331 -49788551 + AluY SINE Alu 1 299 -12 517 170 30 20 chr20 22366600 22366700 -49787182 + AluJb SINE Alu 11 111 -201 1842 149 0 4 chr20 22367804 22368085 -49785797 - AluSx SINE Alu -15 297 18 1428 156 67 73 chr20 22368853 22369167 -49784715 - AluJb SINE Alu 0 312 1 1202 123 8 2 chr20 22369549 22369793 -49784089 + AluSx SINE Alu 13 312 0 2388 77 6 13 chr20 22370244 22370557 -49783325 + AluY SINE Alu 1 311 0 180 0 0 0 chr20 22371093 22371113 -49782769 + (A)n Simple_repeat Simple_repeat 1 20 0 2191 88 16 42 chr20 22373268 22373403 -49780479 + AluSx SINE Alu 1 138 -174 2241 109 0 3 chr20 22373403 22373707 -49780175 + AluSg SINE Alu 1 303 -7 2191 88 16 42 chr20 22373707 22373878 -49780004 + AluSx SINE Alu 138 299 -13 23 0 0 0 chr20 22373945 22373968 -49779914 + AT_rich Low_complexity Low_complexity 1 23 0 2276 92 0 20 chr20 22375288 22375592 -49778290 - AluSg SINE Alu -12 298 1 1230 204 51 27 chr20 22376287 22376581 -49777301 + AluJo SINE Alu 1 301 -11 246 154 0 0 chr20 22376688 22376727 -49777155 - Alu SINE Alu -14 288 250 471 176 19 46 chr20 22377070 22377178 -49776704 + FLAM_A SINE Alu 34 138 -4 395 196 92 59 chr20 22378277 22378430 -49775452 + MER20 DNA MER1_type 58 215 -4 1372 143 0 10 chr20 22378527 22378778 -49775104 + AluJb SINE Alu 1 300 -12 1707 93 13 4 chr20 22379261 22379497 -49774385 + AluSg/x SINE Alu 66 303 -7 28 79 0 0 chr20 22381569 22381632 -49772250 + GC_rich Low_complexity Low_complexity 1 63 0 21 0 0 0 chr20 22382736 22382757 -49771125 + AT_rich Low_complexity Low_complexity 1 21 0 366 261 43 0 chr20 22383599 22383691 -49770191 - MIR SINE MIR -51 211 116 1252 190 0 5 chr20 22384903 22385124 -49768758 - AluJb SINE Alu -90 222 3 25 0 0 0 chr20 22385520 22385545 -49768337 + AT_rich Low_complexity Low_complexity 1 25 0 1921 119 11 8 chr20 22386152 22386420 -49767462 + AluSq SINE Alu 1 269 -44 1634 149 56 31 chr20 22386455 22386743 -49767139 + AluJo SINE Alu 1 295 -17 209 286 48 57 chr20 22386969 22387074 -49766808 + MIR SINE MIR 127 230 -32 2374 99 7 0 chr20 22387151 22387454 -49766428 - AluSx SINE Alu -7 305 1 2292 93 7 0 chr20 22388366 22388668 -49765214 + AluSg SINE Alu 1 304 -6 2228 114 27 0 chr20 22389215 22389513 -49764369 - AluSx SINE Alu -6 306 1 2173 113 3 0 chr20 22389734 22390050 -49763832 - AluSp SINE Alu 0 317 1 3515 110 34 36 chr20 22390109 22390186 -49763696 - MER41C LTR ERV1 0 554 478 2334 110 3 0 chr20 22390186 22390494 -49763388 + AluSx SINE Alu 4 312 0 3515 110 34 36 chr20 22390494 22390971 -49762911 - MER41C LTR ERV1 -76 478 1 815 87 188 27 chr20 22391105 22391254 -49762628 - MER30 DNA MER1_type -57 173 1 2483 88 0 0 chr20 22391286 22391594 -49762288 - AluSq SINE Alu -5 308 1 2011 153 0 6 chr20 22391853 22392167 -49761715 - AluSx SINE Alu 0 312 1 1757 179 0 10 chr20 22392172 22392469 -49761413 - AluJb SINE Alu -18 294 1 2403 60 6 29 chr20 22392490 22392805 -49761077 - AluY SINE Alu -3 308 1 1613 191 11 3 chr20 22392813 22393120 -49760762 - AluJb SINE Alu 0 309 1 2245 109 0 0 chr20 22393122 22393415 -49760467 - AluSq SINE Alu -20 293 1 25 0 0 0 chr20 22393590 22393615 -49760267 + AT_rich Low_complexity Low_complexity 1 25 0 2486 77 0 0 chr20 22393617 22393914 -49759968 + AluY SINE Alu 1 297 -14 326 148 0 19 chr20 22394189 22394243 -49759639 - MER4D LTR ERV1 -60 812 760 495 304 143 4 chr20 22394357 22394587 -49759295 + MIR SINE MIR 1 262 0 587 151 71 48 chr20 22394600 22394726 -49759156 - FLAM_C SINE Alu 0 133 5 342 0 0 0 chr20 22394738 22394776 -49759106 + (TG)n Simple_repeat Simple_repeat 2 39 0 1796 124 56 11 chr20 22394776 22395042 -49758840 - AluSx SINE Alu -34 278 1 352 263 102 5 chr20 22395067 22395179 -49758703 - L1MC/D LINE L1 -320 5801 5685 2023 138 30 0 chr20 22395212 22395509 -49758373 - AluSq SINE Alu -7 306 1 323 134 134 0 chr20 22395744 22395811 -49758071 - L1MC/D LINE L1 -2372 5436 5361 5710 151 41 20 chr20 22395863 22396357 -49757525 - L1MA7 LINE L1 -3 6288 5806 315 0 0 0 chr20 22396357 22396392 -49757490 + (TG)n Simple_repeat Simple_repeat 2 36 0 5710 151 41 20 chr20 22396392 22397398 -49756484 - L1MA7 LINE L1 -485 5806 4747 1262 166 93 8 chr20 22397406 22397653 -49756229 + Tigger3(Golem) DNA MER2_type 1 268 -2761 4576 104 55 14 chr20 22397714 22397842 -49756040 + Tigger3(Golem) DNA MER2_type 2288 2409 -620 2160 136 0 7 chr20 22397842 22398152 -49755730 + AluSx SINE Alu 1 308 -4 4576 104 55 14 chr20 22398152 22398231 -49755651 + Tigger3(Golem) DNA MER2_type 2409 2483 -546 2209 112 3 0 chr20 22398231 22398517 -49755365 + AluSq SINE Alu 1 287 -26 908 115 0 0 chr20 22398406 22398528 -49755354 + AluSp/q SINE Alu 177 298 -15 * 4576 104 55 14 chr20 22398517 22399021 -49754861 + Tigger3(Golem) DNA MER2_type 2483 3029 0 1540 136 15 64 chr20 22399021 22399160 -49754722 - L1MA7 LINE L1 -1406 4740 4596 2374 101 0 0 chr20 22399160 22399457 -49754425 - AluSq SINE Alu -15 298 2 1742 145 62 10 chr20 22399461 22399750 -49754132 - AluJb SINE Alu -8 304 1 1540 136 15 64 chr20 22399750 22399940 -49753942 - L1MA7 LINE L1 -1553 4593 4419 2060 115 31 0 chr20 22399998 22400285 -49753597 + AluSx SINE Alu 11 306 -6 1133 163 58 83 chr20 22400371 22400726 -49753156 + MER33 DNA MER1_type 1 324 0 716 164 8 39 chr20 22401003 22401131 -49752751 + FLAM_A SINE Alu 8 131 -11 2264 113 0 26 chr20 22401449 22401759 -49752123 + AluSx SINE Alu 1 302 -10 1796 142 57 7 chr20 22401910 22402191 -49751691 + AluJb SINE Alu 1 295 -17 2076 121 7 0 chr20 22402193 22402473 -49751409 + AluSx SINE Alu 1 282 -30 297 0 0 0 chr20 22402478 22402511 -49751371 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 540 152 0 15 chr20 22402520 22402769 -49751113 + AluJo SINE Alu 1 298 -14 2549 53 0 0 chr20 22404355 22404655 -49749227 + AluY SINE Alu 1 300 -11 2125 120 40 0 chr20 22404922 22405222 -49748660 - AluSx SINE Alu 0 312 1 2078 133 10 7 chr20 22405590 22405884 -49747998 + AluSx SINE Alu 9 303 -9 24 32 0 0 chr20 22406222 22406253 -49747629 + AT_rich Low_complexity Low_complexity 1 31 0 1990 148 10 3 chr20 22406949 22407247 -49746635 + AluJb SINE Alu 1 300 -12 1458 192 43 17 chr20 22407321 22407454 -49746428 + AluJo SINE Alu 1 129 -183 2341 73 0 0 chr20 22407454 22407729 -49746153 + AluY SINE Alu 24 298 -13 1458 192 43 17 chr20 22407729 22407897 -49745985 + AluJo SINE Alu 129 310 -2 2261 112 0 10 chr20 22407909 22408213 -49745669 + AluSq SINE Alu 7 307 -6 248 238 62 0 chr20 22408485 22408565 -49745317 - L1MC/D LINE L1 -2056 5752 5668 706 207 89 69 chr20 22408597 22408655 -49745227 + MIR SINE MIR 52 107 -155 2555 50 0 7 chr20 22408655 22408957 -49744925 - AluY SINE Alu -11 300 1 706 207 89 69 chr20 22408957 22409101 -49744781 + MIR SINE MIR 107 258 -4 316 261 177 23 chr20 22409121 22409251 -49744631 - L1MC/D LINE L1 -479 5642 5493 2017 148 0 22 chr20 22410093 22410411 -49743471 + AluJb SINE Alu 1 311 -1 267 255 182 52 chr20 22410635 22410827 -49743055 + MIR SINE MIR 1 217 -45 1412 98 5 5 chr20 22410986 22411211 -49742671 + AluSg/x SINE Alu 96 320 0 2156 129 3 3 chr20 22411290 22411593 -49742289 - AluSx SINE Alu -9 303 1 2990 140 30 30 chr20 22411934 22412469 -49741413 - MLT2B3 LTR ERVL -19 535 1 639 297 90 35 chr20 22412547 22413032 -49740850 - L2 LINE L2 -104 3209 2695 793 121 9 9 chr20 22413036 22413152 -49740730 + AluJo/FLAM SINE Alu 1 116 -186 2021 107 32 21 chr20 22413152 22413476 -49740406 - AluSp SINE Alu 0 327 1 22 0 0 0 chr20 22413476 22413498 -49740384 + AT_rich Low_complexity Low_complexity 1 22 0 249 139 0 0 chr20 22413498 22413541 -49740341 + (GAA)n Simple_repeat Simple_repeat 2 44 0 183 129 0 0 chr20 22413542 22413573 -49740309 + (CAG)n Simple_repeat Simple_repeat 3 33 0 232 276 129 66 chr20 22413581 22413658 -49740224 - L2 LINE L2 -633 2681 2610 1263 229 35 44 chr20 22413658 22413998 -49739884 + MER58B DNA MER1_type 2 338 -3 232 276 129 66 chr20 22413998 22414206 -49739676 - L2 LINE L2 -704 2610 2378 1233 155 4 69 chr20 22414266 22414498 -49739384 + AluJb SINE Alu 85 301 -11 575 260 88 54 chr20 22414615 22414946 -49738936 - MLT1H LTR MaLR -196 353 12 422 252 49 16 chr20 22414951 22415074 -49738808 + MIR SINE MIR 75 201 -61 317 208 64 140 chr20 22415142 22415232 -49738650 + MER113 DNA MER1_type? 4 99 -422 2398 95 0 7 chr20 22415232 22415536 -49738346 - AluSc SINE Alu -7 302 1 317 208 64 140 chr20 22415536 22415567 -49738315 + MER113 DNA MER1_type? 99 131 -390 2446 97 3 0 chr20 22415567 22415877 -49738005 + AluSp SINE Alu 1 311 -2 317 208 64 140 chr20 22415877 22416004 -49737878 + MER113 DNA MER1_type? 131 234 -287 687 109 0 154 chr20 22416004 22416160 -49737722 + AluJb SINE Alu 2 133 -179 2221 102 3 3 chr20 22416161 22416476 -49737406 + AluSx SINE Alu 1 315 0 2181 108 36 0 chr20 22416476 22416755 -49737127 + AluSx SINE Alu 2 290 -22 288 270 133 39 chr20 22416757 22416990 -49736892 + MER113 DNA MER1_type? 224 478 -43 273 274 120 51 chr20 22417118 22417293 -49736589 + MIR SINE MIR 63 249 -13 1788 176 0 13 chr20 22417946 22418248 -49735634 - AluJo SINE Alu -14 298 1 376 250 206 0 chr20 22418523 22418703 -49735179 + LTR16C LTR ERVL 275 491 0 2213 127 0 9 chr20 22419495 22419810 -49734072 - AluSx SINE Alu 0 312 1 831 156 0 15 chr20 22419814 22419949 -49733933 - FLAM_C SINE Alu 0 133 1 597 280 61 31 chr20 22419959 22420153 -49733729 - L2 LINE L2 0 3313 3108 2276 112 7 3 chr20 22420153 22420458 -49733424 + AluSx SINE Alu 1 306 -6 597 280 61 31 chr20 22420458 22420524 -49733358 - L2 LINE L2 -205 3108 3045 710 238 78 135 chr20 22420524 22421038 -49732844 - MLT1H1 LTR MaLR 0 555 101 338 252 102 62 chr20 22421135 22421361 -49732521 - L2 LINE L2 -337 2977 2743 231 286 50 66 chr20 22421449 22421631 -49732251 + L2 LINE L2 3058 3236 -77 25 0 0 28 chr20 22421776 22421793 -49732089 + AT_rich Low_complexity Low_complexity 1 17 -18 2392 87 3 0 chr20 22421793 22422091 -49731791 - AluY SINE Alu -12 299 1 25 0 0 28 chr20 22422091 22422109 -49731773 + AT_rich Low_complexity Low_complexity 17 35 0 818 127 8 0 chr20 22422526 22422644 -49731238 - FLAM_A SINE Alu -3 139 21 6696 68 14 44 chr20 22422677 22423660 -49730222 - SVA Other Other 0 1386 433 1873 95 47 15 chr20 22423682 22424093 -49729789 - SVA Other Other -520 866 519 923 158 0 7 chr20 22424094 22424233 -49729649 - AluJo SINE Alu -169 143 6 210 94 0 0 chr20 22424237 22424269 -49729613 + L2 LINE L2 2453 2484 -830 1550 240 79 24 chr20 22424346 22424853 -49729029 + L2 LINE L2 2488 3022 -291 216 200 0 0 chr20 22425193 22425248 -49728634 + GA-rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr20 22426050 22426072 -49727810 + AT_rich Low_complexity Low_complexity 1 22 0 1785 141 67 7 chr20 22426164 22426447 -49727435 + AluJo SINE Alu 1 300 -12 700 237 94 84 chr20 22426504 22426587 -49727295 + MLT1G1 LTR MaLR 3 84 -506 2169 135 7 0 chr20 22426587 22426890 -49726992 - AluSx SINE Alu -7 305 1 700 237 94 84 chr20 22426890 22427315 -49726567 + MLT1G1 LTR MaLR 84 515 -75 632 228 117 61 chr20 22427354 22427551 -49726331 + L2 LINE L2 3106 3313 0 250 290 52 52 chr20 22427684 22427861 -49726021 + L1P LINE L1 4926 5102 -1044 201 150 0 25 chr20 22427880 22427893 -49725989 + (GAAA)n Simple_repeat Simple_repeat 2 14 -26 859 120 23 23 chr20 22427893 22428026 -49725856 + FLAM_C SINE Alu 1 133 0 201 150 0 25 chr20 22428026 22428052 -49725830 + (GAAA)n Simple_repeat Simple_repeat 14 40 0 2587 69 0 0 chr20 22428129 22428435 -49725447 + AluSg SINE Alu 1 306 -4 522 228 114 15 chr20 22428557 22428624 -49725258 - MER2 DNA MER2_type -1 344 285 1885 155 76 0 chr20 22428624 22428914 -49724968 + AluJb SINE Alu 1 312 0 522 228 114 15 chr20 22428914 22429048 -49724834 - MER2 DNA MER2_type -60 285 123 843 164 0 0 chr20 22429049 22429171 -49724711 + FLAM_C SINE Alu 1 122 -11 219 114 0 0 chr20 22429181 22429216 -49724666 + (TG)n Simple_repeat Simple_repeat 2 36 0 319 183 0 118 chr20 22429216 22429298 -49724584 - L1MC4 LINE L1 -1376 6666 6595 397 228 22 43 chr20 22429375 22429467 -49724415 - L1MC4 LINE L1 -1339 6703 6614 354 304 36 0 chr20 22429399 22429509 -49724373 + L1MC4 LINE L1 6614 6703 -1339 * 656 125 8 94 chr20 22429510 22429552 -49724330 - MER2 DNA MER2_type -214 131 87 2079 128 3 3 chr20 22429552 22429849 -49724033 - AluJb SINE Alu -15 297 1 656 125 8 94 chr20 22429849 22429934 -49723948 - MER2 DNA MER2_type -258 87 15 582 277 94 9 chr20 22429939 22430163 -49723719 + L1MC/D LINE L1 5360 5602 -2206 331 229 83 55 chr20 22430220 22430329 -49723553 + L1MC4a LINE L1 5274 5385 -2423 844 251 20 0 chr20 22430338 22430541 -49723341 + L1MC4a LINE L1 5620 5826 -1982 1214 124 6 0 chr20 22430544 22430713 -49723169 - AluSg/x SINE Alu -14 298 129 23 0 0 0 chr20 22430809 22430832 -49723050 + AT_rich Low_complexity Low_complexity 1 23 0 258 264 6 99 chr20 22430832 22431014 -49722868 + L1MC4a LINE L1 5876 6040 -1768 1193 170 179 20 chr20 22431275 22431616 -49722266 + LTR16A1 LTR ERVL 63 457 0 1023 251 82 35 chr20 22432230 22432541 -49721341 + LTR16C LTR ERVL 104 436 -55 2439 82 7 0 chr20 22432541 22432844 -49721038 - AluSq SINE Alu -8 305 1 1023 251 82 35 chr20 22432844 22432898 -49720984 + LTR16C LTR ERVL 436 486 -5 238 255 174 27 chr20 22433134 22433283 -49720599 + MLT1J2 LTR MaLR 258 428 -22 369 94 0 0 chr20 22433293 22433371 -49720511 - AluSc SINE Alu 0 304 227 827 105 0 0 chr20 22433371 22433476 -49720406 - AluSq/x SINE Alu -208 105 1 875 275 139 28 chr20 22433504 22433999 -49719883 + MLT1K LTR MaLR 23 572 -16 277 266 16 0 chr20 22434857 22434921 -49718961 + GA-rich Low_complexity Low_complexity 1 65 0 275 305 29 0 chr20 22435137 22435311 -49718571 + (TGG)n Simple_repeat Simple_repeat 2 180 0 290 295 35 0 chr20 22435500 22435673 -49718209 + (TGG)n Simple_repeat Simple_repeat 2 180 0 1531 148 0 0 chr20 22436917 22437127 -49716755 + AluJb SINE Alu 86 295 -17 219 154 0 26 chr20 22437708 22437747 -49716135 + CT-rich Low_complexity Low_complexity 2 39 0 243 0 0 0 chr20 22438244 22438271 -49715611 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2186 100 7 3 chr20 22438376 22438666 -49715216 + AluSx SINE Alu 1 291 -21 1205 255 99 15 chr20 22438666 22439070 -49714812 - LTR16C LTR ERVL -4 487 50 369 268 56 73 chr20 22439360 22439473 -49714409 + MER5B DNA MER1_type 1 111 -67 2525 67 0 0 chr20 22439473 22439771 -49714111 - AluY SINE Alu -13 298 1 369 268 56 73 chr20 22439771 22439836 -49714046 + MER5B DNA MER1_type 111 176 -2 1292 128 10 5 chr20 22439999 22440202 -49713680 + L1PA16 LINE L1 5953 6156 -10 2156 115 0 0 chr20 22440343 22440661 -49713221 + AluSx SINE Alu 8 325 0 2490 70 0 0 chr20 22440684 22440985 -49712897 - AluY SINE Alu -10 301 1 2047 140 0 0 chr20 22441249 22441567 -49712315 - AluSx SINE Alu 0 318 1 22 0 0 0 chr20 22441579 22441601 -49712281 + AT_rich Low_complexity Low_complexity 1 22 0 1984 145 0 0 chr20 22441601 22441918 -49711964 + AluSx SINE Alu 1 317 0 2215 114 0 7 chr20 22442113 22442419 -49711463 - AluSx SINE Alu -8 304 1 327 218 26 13 chr20 22442453 22442531 -49711351 + MER5B DNA MER1_type 95 173 -5 1956 127 13 10 chr20 22442791 22443090 -49710792 + AluJo SINE Alu 5 304 -8 186 328 126 0 chr20 22444277 22444396 -49709486 + MIR SINE MIR 62 195 -67 1599 106 0 22 chr20 22444462 22444688 -49709194 + AluSg/x SINE Alu 81 301 -9 389 291 49 39 chr20 22445095 22445298 -49708584 + L1ME3A LINE L1 5533 5737 -2071 183 80 0 0 chr20 22445298 22445323 -49708559 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 684 167 22 22 chr20 22445326 22445506 -49708376 + GA-rich Low_complexity Low_complexity 1 180 0 2242 107 0 0 chr20 22445584 22445897 -49707985 - AluSx SINE Alu 0 312 1 203 278 0 42 chr20 22446744 22446816 -49707066 - MER5A DNA MER1_type -112 77 9 585 228 201 69 chr20 22447193 22447597 -49706285 + LTR16A1 LTR ERVL 1 457 0 255 125 0 0 chr20 22447702 22447742 -49706140 + (TC)n Simple_repeat Simple_repeat 2 41 0 189 0 0 0 chr20 22447742 22447763 -49706119 + (CA)n Simple_repeat Simple_repeat 1 21 0 2001 141 0 22 chr20 22448262 22448575 -49705307 + AluSx SINE Alu 4 309 -3 968 241 28 34 chr20 22448925 22449102 -49704780 - MER33 DNA MER1_type -2262 323 147 2360 105 3 0 chr20 22449102 22449406 -49704476 + AluSp SINE Alu 1 305 -8 968 241 28 34 chr20 22449406 22449552 -49704330 - MER33 DNA MER1_type -2438 147 2 2570 36 0 0 chr20 22449945 22450252 -49703630 + AluY SINE Alu 1 307 -4 307 301 191 0 chr20 22450352 22450488 -49703394 + MIR SINE MIR 20 181 -81 864 224 40 18 chr20 22450821 22451044 -49702838 + LTR16C LTR ERVL 264 491 0 275 337 11 0 chr20 22451056 22451148 -49702734 + L2 LINE L2 2962 3054 -218 313 250 117 61 chr20 22451367 22451563 -49702319 - MIR SINE MIR 0 262 56 1005 229 39 36 chr20 22452131 22452411 -49701471 + L1ME3A LINE L1 5884 6164 -6 1618 138 81 34 chr20 22452430 22452728 -49701154 + AluJo SINE Alu 1 312 0 1732 162 7 3 chr20 22453018 22453314 -49700568 - AluJo SINE Alu -15 297 1 429 232 0 0 chr20 22453362 22453504 -49700378 + (GGATG)n Simple_repeat Simple_repeat 4 145 0 214 350 88 0 chr20 22453564 22453701 -49700181 - L2 LINE L2 -527 2787 2639 352 283 17 8 chr20 22454116 22454236 -49699646 - MIR SINE MIR -114 148 28 1887 73 4 8 chr20 22454251 22454498 -49699384 - AluSg SINE Alu -9 301 56 2183 113 0 7 chr20 22454994 22455303 -49698579 - AluSq SINE Alu -6 307 1 498 195 412 19 chr20 22455303 22455395 -49698487 + MLT1J LTR MaLR 17 72 -439 2238 147 55 29 chr20 22455395 22455585 -49698297 + MSTB LTR MaLR 1 184 -242 2243 90 7 0 chr20 22455585 22455885 -49697997 + AluSp SINE Alu 1 302 -11 2238 147 55 29 chr20 22455885 22456109 -49697773 + MSTB LTR MaLR 184 426 0 498 195 412 19 chr20 22456109 22456278 -49697604 + MLT1J LTR MaLR 72 381 -130 696 240 183 50 chr20 22456359 22456742 -49697140 + MLT1H1 LTR MaLR 45 478 -77 194 276 58 35 chr20 22456762 22456849 -49697033 - MIR SINE MIR -99 109 21 434 255 161 25 chr20 22457195 22457356 -49696526 - MER5A DNA MER1_type 0 189 7 349 267 184 53 chr20 22457649 22458024 -49695858 - L2 LINE L2 -11 3261 2838 808 145 0 15 chr20 22458727 22458858 -49695024 - FLAM_C SINE Alu -3 140 12 194 186 23 23 chr20 22459023 22459066 -49694816 - MIR SINE MIR -113 149 107 357 178 84 0 chr20 22459353 22459460 -49694422 + L1MC4a LINE L1 5710 5825 -1983 539 200 156 11 chr20 22459474 22459686 -49694196 + MLT1F LTR MaLR 299 536 -6 276 337 22 0 chr20 22460055 22460147 -49693735 + MIR3 SINE MIR 74 167 -41 415 245 37 98 chr20 22460151 22460314 -49693568 + MIR SINE MIR 2 154 -108 2104 114 10 0 chr20 22460324 22460623 -49693259 + AluSq SINE Alu 4 305 -8 2332 100 0 0 chr20 22460662 22460972 -49692910 + AluSx SINE Alu 1 310 -2 2077 112 10 0 chr20 22461096 22461392 -49692490 + AluSx SINE Alu 1 299 -13 595 268 34 64 chr20 22461484 22461535 -49692347 + MER46C DNA MER2_type 2 53 -285 1580 152 76 0 chr20 22461535 22461823 -49692059 + AluSx SINE Alu 1 308 0 595 268 34 64 chr20 22461823 22462005 -49691877 + MER46C DNA MER2_type 53 229 -109 291 296 46 28 chr20 22462756 22462864 -49691018 - MIR SINE MIR -129 133 24 231 269 134 60 chr20 22463058 22463192 -49690690 + MIR3 SINE MIR 33 176 -32 231 158 88 18 chr20 22463557 22463614 -49690268 + LTR67 LTR ERVL 481 541 -16 779 192 0 0 chr20 22464185 22464315 -49689567 + FLAM_C SINE Alu 2 131 -2 777 250 47 55 chr20 22464326 22464690 -49689192 + L1MC5 LINE L1 6957 7317 -644 647 240 36 26 chr20 22464706 22464837 -49689045 + MER3 DNA MER1_type 3 138 -71 1990 106 0 24 chr20 22464837 22465130 -49688752 - AluSx SINE Alu -26 286 1 647 240 36 26 chr20 22465130 22465190 -49688692 + MER3 DNA MER1_type 138 196 -13 1217 246 165 11 chr20 22465195 22465655 -49688227 + L1MC5 LINE L1 7334 7864 -97 387 314 58 0 chr20 22466363 22466500 -49687382 - MIR SINE MIR -48 214 70 2150 106 0 3 chr20 22466509 22466810 -49687072 + AluSx SINE Alu 1 300 -12 603 174 99 0 chr20 22467240 22467361 -49686521 - MIR SINE MIR -69 193 61 2143 80 3 71 chr20 22467551 22467887 -49685995 + AluSp SINE Alu 1 313 0 1511 93 5 14 chr20 22469521 22469735 -49684147 - AluSg/x SINE Alu -24 288 77 302 198 77 55 chr20 22469742 22469833 -49684049 + L1MC5 LINE L1 7452 7544 -417 426 190 253 17 chr20 22469843 22470017 -49683865 + L1MC5 LINE L1 7711 7925 -36 203 318 149 7 chr20 22470056 22470210 -49683672 + L2 LINE L2 1734 1909 -1405 1722 139 68 0 chr20 22470223 22470503 -49683379 - AluSx SINE Alu -13 299 1 265 342 61 9 chr20 22470574 22470688 -49683194 + MIR SINE MIR 33 152 -110 759 257 147 47 chr20 22470699 22471147 -49682735 - MLT1H1 LTR MaLR 0 555 63 247 93 37 0 chr20 22471217 22471239 -49682643 + CT-rich Low_complexity Low_complexity 2 22 -35 2355 81 0 7 chr20 22471239 22471547 -49682335 - AluY SINE Alu -5 306 1 247 93 37 0 chr20 22471547 22471578 -49682304 + CT-rich Low_complexity Low_complexity 22 57 0 1274 126 0 0 chr20 22471706 22471889 -49681993 - AluJo SINE Alu -125 187 5 2579 144 52 18 chr20 22471893 22472242 -49681640 - L1MA5 LINE L1 -47 6253 5883 2126 118 0 0 chr20 22472242 22472539 -49681343 - AluSq SINE Alu -16 297 1 2579 144 52 18 chr20 22472539 22472647 -49681235 - L1MA5 LINE L1 -417 5883 5780 826 193 10 69 chr20 22472649 22472851 -49681031 - MLT1D LTR MaLR -315 190 1 1289 286 43 11 chr20 22472993 22473430 -49680452 + LTR16B LTR ERVL 3 453 -11 1153 224 26 55 chr20 22473441 22473684 -49680198 + MER113 DNA MER1_type? 108 340 -181 1839 159 0 7 chr20 22473684 22474005 -49679877 + AluJb SINE Alu 1 312 0 1153 224 26 55 chr20 22474005 22474105 -49679777 + MER113 DNA MER1_type? 340 441 -80 2181 115 0 0 chr20 22474656 22474961 -49678921 - AluSg SINE Alu -5 305 1 2340 87 0 3 chr20 22474966 22475275 -49678607 - AluSx SINE Alu -4 308 1 264 200 173 13 chr20 22475563 22475638 -49678244 - MLT1K LTR MaLR -180 408 322 1951 127 0 0 chr20 22476176 22476482 -49677400 + AluSx SINE Alu 1 306 0 303 311 86 33 chr20 22476521 22476672 -49677210 + MIR SINE MIR 103 261 -1 1797 115 66 28 chr20 22476673 22476961 -49676921 - AluSx SINE Alu -13 299 1 1636 207 16 76 chr20 22477033 22477468 -49676414 + MLT2B3 LTR ERVL 1 409 -145 1851 134 14 3 chr20 22477677 22477969 -49675913 + AluSg SINE Alu 1 295 -15 356 188 0 12 chr20 22477969 22478049 -49675833 + GA-rich Low_complexity Low_complexity 1 79 0 189 0 0 0 chr20 22478190 22478211 -49675671 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 1097 151 26 93 chr20 22478213 22478273 -49675609 - MER33 DNA MER1_type -2284 340 278 1009 180 0 6 chr20 22478273 22478440 -49675442 + FAM SINE Alu 1 166 -9 2776 13 0 0 chr20 22478449 22478763 -49675119 + AluYb8 SINE Alu 1 314 -4 1097 151 26 93 chr20 22478763 22479023 -49674859 - MER33 DNA MER1_type -2354 270 2 207 184 0 0 chr20 22479079 22479117 -49674765 + GA-rich Low_complexity Low_complexity 1 38 0 2100 87 31 3 chr20 22479186 22479473 -49674409 + AluSx SINE Alu 1 295 -17 644 322 62 42 chr20 22479630 22480149 -49673733 - LTR67 LTR ERVL -27 530 2 2283 92 0 0 chr20 22480192 22480495 -49673387 + AluSx SINE Alu 1 303 -9 3487 124 3 13 chr20 22480503 22481112 -49672770 + L1MA9 LINE L1 5182 5788 -524 27 0 0 0 chr20 22481121 22481148 -49672734 + AT_rich Low_complexity Low_complexity 1 27 0 1062 123 0 6 chr20 22481148 22481310 -49672572 - AluSg/x SINE Alu -22 288 128 2712 131 78 18 chr20 22481380 22481893 -49671989 + L1MA9 LINE L1 5759 6302 -10 222 255 7 57 chr20 22482160 22482301 -49671581 + G-rich Low_complexity Low_complexity 1 134 0 243 146 0 0 chr20 22482448 22482489 -49671393 + (CTG)n Simple_repeat Simple_repeat 3 43 0 21 0 0 0 chr20 22483419 22483440 -49670442 + GC_rich Low_complexity Low_complexity 1 21 0 1555 214 20 3 chr20 22484016 22484367 -49669515 - THE1-int LTR MaLR -449 1131 775 1013 196 10 14 chr20 22484467 22484676 -49669206 - AluJo SINE Alu -104 208 1 1822 129 0 45 chr20 22484773 22484890 -49668992 + AluSq SINE Alu 1 122 -191 2346 80 0 6 chr20 22484890 22485201 -49668681 + AluY SINE Alu 1 309 -2 1822 129 0 45 chr20 22485201 22485393 -49668489 + AluSq SINE Alu 122 296 -17 541 220 18 0 chr20 22486869 22486978 -49666904 - MIR SINE MIR -88 174 64 213 39 0 0 chr20 22487082 22487108 -49666774 + (A)n Simple_repeat Simple_repeat 1 26 0 1205 269 80 56 chr20 22487316 22487856 -49666026 + Charlie1a DNA MER1_type 1 553 -902 914 261 179 11 chr20 22487850 22488031 -49665851 + Charlie1a DNA MER1_type 706 855 -1906 * 1661 179 20 0 chr20 22488031 22488333 -49665549 - AluJb SINE Alu -4 308 1 914 261 179 11 chr20 22488333 22488587 -49665295 + Charlie1a DNA MER1_type 855 1214 -241 323 199 99 84 chr20 22488658 22488789 -49665093 + Charlie1a DNA MER1_type 1317 1449 -6 944 123 0 0 chr20 22489095 22489249 -49664633 + AluSp/q SINE Alu 156 309 0 2022 133 3 7 chr20 22489622 22489930 -49663952 + AluSx SINE Alu 1 307 -5 704 144 144 0 chr20 22490571 22490689 -49663193 - AluSq/x SINE Alu -176 136 2 982 109 7 0 chr20 22490701 22490848 -49663034 - L1MA4 LINE L1 -4 6296 6149 1773 195 162 5 chr20 22490931 22491107 -49662775 - L1MD2 LINE L1 -6 6353 6206 222 37 0 0 chr20 22491107 22491134 -49662748 + (TG)n Simple_repeat Simple_repeat 2 28 0 1773 195 162 5 chr20 22491134 22491426 -49662456 - L1MD2 LINE L1 -153 6206 5807 2052 117 3 0 chr20 22491429 22491729 -49662153 - AluSx SINE Alu -11 301 1 27 49 0 0 chr20 22491794 22491835 -49662047 + AT_rich Low_complexity Low_complexity 1 41 0 262 268 5 116 chr20 22491908 22492106 -49661776 - L1MD2 LINE L1 -368 5794 5619 909 260 92 64 chr20 22492142 22492505 -49661377 - L1MD2 LINE L1 -663 5507 5155 2153 93 0 10 chr20 22492505 22492807 -49661075 - AluSc SINE Alu -10 299 1 909 260 92 64 chr20 22492807 22493450 -49660432 - L1MD2 LINE L1 -1015 5155 4475 829 184 0 11 chr20 22493456 22493635 -49660247 - AluJb SINE Alu -1 311 135 463 288 42 71 chr20 22493640 22493812 -49660070 - L1MD2 LINE L1 -1674 4472 4296 2202 88 3 3 chr20 22493812 22494107 -49659775 - AluSc SINE Alu -14 295 1 463 288 42 71 chr20 22494107 22494341 -49659541 - L1MD2 LINE L1 -1850 4296 4078 2247 79 0 3 chr20 22494434 22494725 -49659157 + AluSp SINE Alu 6 295 -18 934 273 48 56 chr20 22494836 22495213 -49658669 + L3 LINE CR1 1197 1570 -7 1564 101 14 0 chr20 22495704 22495922 -49657960 + AluSq SINE Alu 1 221 -92 463 146 79 0 chr20 22496022 22496111 -49657771 + MER46B DNA MER2_type 83 53 -183 654 202 16 8 chr20 22496115 22496239 -49657643 + FLAM_C SINE Alu 2 126 -7 2224 66 0 3 chr20 22496258 22496544 -49657338 + AluY SINE Alu 26 310 -1 1171 150 0 5 chr20 22496548 22496735 -49657147 + MER46B DNA MER2_type 48 233 -3 833 121 0 0 chr20 22497409 22497533 -49656349 + AluSq/x SINE Alu 1 124 -188 255 146 0 0 chr20 22497533 22497581 -49656301 + AluSc SINE Alu 252 299 0 1811 130 10 30 chr20 22497785 22497925 -49655957 + AluSx SINE Alu 1 142 -170 1979 128 3 3 chr20 22497925 22498230 -49655652 + AluSx SINE Alu 1 305 -7 1811 130 10 30 chr20 22498230 22498389 -49655493 + AluSx SINE Alu 142 294 -18 693 232 5 60 chr20 22498399 22498584 -49655298 + FRAM SINE Alu 1 175 -1 2171 176 43 6 chr20 22498856 22499328 -49654554 + L1MC1 LINE L1 5384 5851 -482 34 0 0 0 chr20 22499428 22499462 -49654420 + AT_rich Low_complexity Low_complexity 1 34 0 2020 197 127 65 chr20 22499758 22500210 -49653672 + L1ME2 LINE L1 4651 5073 -1091 1707 178 0 37 chr20 22500210 22500531 -49653351 + AluJo SINE Alu 4 312 0 2020 197 127 65 chr20 22500531 22500637 -49653245 + L1ME2 LINE L1 5073 5171 -993 2428 72 3 7 chr20 22500637 22500942 -49652940 + AluY SINE Alu 1 304 -7 2020 197 127 65 chr20 22500942 22501126 -49652756 + L1ME2 LINE L1 5171 5342 -822 1712 167 3 23 chr20 22501126 22501431 -49652451 + AluSx SINE Alu 3 301 -11 1975 97 45 39 chr20 22501440 22501545 -49652337 + AluSp SINE Alu 1 104 -209 2379 48 7 3 chr20 22501545 22501834 -49652048 + AluY SINE Alu 1 290 -21 1975 97 45 39 chr20 22501834 22502037 -49651845 + AluSp SINE Alu 104 311 -2 2020 197 127 65 chr20 22502037 22502448 -49651434 + L1ME2 LINE L1 5349 5899 -265 2164 128 0 7 chr20 22502602 22502908 -49650974 + AluSx SINE Alu 7 310 -2 916 211 0 0 chr20 22502921 22503087 -49650795 + AluJb SINE Alu 133 298 -14 206 354 12 12 chr20 22503538 22503620 -49650262 + L2 LINE L2 3185 3266 -6 2239 117 0 0 chr20 22503638 22503947 -49649935 + AluSx SINE Alu 1 309 -3 1279 111 0 11 chr20 22503947 22504128 -49649754 + AluSg/x SINE Alu 134 312 0 2134 120 3 0 chr20 22504149 22504450 -49649432 + AluSq SINE Alu 1 302 -11 21 36 0 0 chr20 22505245 22505273 -49648609 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 22506338 22506361 -49647521 + AT_rich Low_complexity Low_complexity 1 23 0 1754 173 17 3 chr20 22506792 22507092 -49646790 + AluJo SINE Alu 1 304 -8 21 71 0 0 chr20 22507753 22507795 -49646087 + AT_rich Low_complexity Low_complexity 1 42 0 1737 243 34 44 chr20 22508202 22508356 -49645526 + L1MB4 LINE L1 4538 4692 -1454 2184 115 20 0 chr20 22508356 22508651 -49645231 - AluSx SINE Alu -11 301 1 1737 243 34 44 chr20 22508651 22509060 -49644822 + L1MB4 LINE L1 4692 5095 -1051 * 5024 50 2 2 chr20 22509051 22509694 -49644188 - L1PA5 LINE L1 -2587 3559 2917 15950 48 4 13 chr20 22509694 22512321 -49641561 + L1PA5 LINE L1 3535 6154 0 1762 201 23 39 chr20 22512323 22512574 -49641308 + L1MB4 LINE L1 5079 5333 -850 2290 97 3 3 chr20 22512574 22512873 -49641009 + AluSp SINE Alu 1 299 -14 1762 201 23 39 chr20 22512873 22513057 -49640825 + L1MB4 LINE L1 5333 5500 -683 2977 106 41 10 chr20 22513057 22513472 -49640410 - MSTA LTR MaLR 0 428 1 1762 201 23 39 chr20 22513472 22513609 -49640273 + L1MB4 LINE L1 5500 5638 -545 237 194 0 104 chr20 22513610 22513677 -49640205 - Tigger5 DNA MER2_type -22 2301 2242 2241 109 0 0 chr20 22513682 22513976 -49639906 - AluSx SINE Alu -16 296 3 2102 115 35 0 chr20 22513978 22514266 -49639616 - AluSx SINE Alu -14 298 1 470 167 0 0 chr20 22514270 22514342 -49639540 + Tigger5 DNA MER2_type 2249 2320 -3 * 488 190 0 0 chr20 22514342 22514420 -49639462 - Tigger5 DNA MER2_type -2245 78 1 3233 149 17 9 chr20 22514420 22514951 -49638931 + L1MB4 LINE L1 5645 6179 -1 1676 275 101 24 chr20 22515124 22515736 -49638146 + HAL1b LINE L1 89 652 -696 2213 116 7 0 chr20 22515736 22516039 -49637843 + AluSx SINE Alu 1 305 -7 1676 275 101 24 chr20 22516039 22516135 -49637747 + HAL1b LINE L1 652 739 -609 2476 132 79 17 chr20 22516135 22516538 -49637344 + MSTA LTR MaLR 1 428 0 1676 275 101 24 chr20 22516538 22516587 -49637295 + HAL1b LINE L1 739 906 -442 236 118 59 20 chr20 22516710 22516726 -49637156 + GA-rich Low_complexity Low_complexity 1 15 -38 2035 146 13 0 chr20 22516726 22517027 -49636855 + AluSx SINE Alu 1 305 -7 236 118 59 20 chr20 22517027 22517061 -49636821 + GA-rich Low_complexity Low_complexity 15 53 0 4479 194 25 23 chr20 22517079 22518010 -49635872 + L1MC3 LINE L1 6171 7103 -682 236 219 0 16 chr20 22519337 22519401 -49634481 + A-rich Low_complexity Low_complexity 2 64 0 2466 94 0 0 chr20 22519536 22519845 -49634037 - AluSx SINE Alu -3 309 1 2080 118 38 0 chr20 22519906 22520195 -49633687 - AluSx SINE Alu -12 300 1 266 235 0 0 chr20 22520258 22520326 -49633556 + A-rich Low_complexity Low_complexity 1 68 0 1424 149 21 8 chr20 22520460 22520695 -49633187 + AluSg/x SINE Alu 75 312 0 981 84 65 39 chr20 22521642 22521823 -49632059 + AluSg/x SINE Alu 127 311 0 23 0 0 0 chr20 22522581 22522604 -49631278 + GC_rich Low_complexity Low_complexity 1 23 0 188 350 0 38 chr20 22523291 22523371 -49630511 - L2 LINE L2 -2 3270 3194 382 295 52 40 chr20 22523910 22524083 -49629799 + MER5B DNA MER1_type 4 178 0 432 0 0 0 chr20 22524139 22524187 -49629695 + (TG)n Simple_repeat Simple_repeat 2 49 0 305 256 33 33 chr20 22524314 22524404 -49629478 - MIR SINE MIR -3 259 170 2196 97 3 29 chr20 22525039 22525348 -49628534 + AluSx SINE Alu 1 301 -11 737 149 130 13 chr20 22525468 22525622 -49628260 + MER2 DNA MER2_type 65 236 -109 * 1073 177 45 36 chr20 22525620 22525726 -49628156 + MER2 DNA MER2_type 120 224 -121 2459 66 3 0 chr20 22525726 22526027 -49627855 + AluY SINE Alu 1 302 -9 1073 177 45 36 chr20 22526027 22526140 -49627742 + MER2 DNA MER2_type 224 341 -4 908 181 100 35 chr20 22526166 22526426 -49627456 - L1MC4a LINE L1 -1371 6437 6161 2129 100 17 10 chr20 22526566 22526866 -49627016 + AluSq SINE Alu 1 302 -11 22 0 0 0 chr20 22526960 22526982 -49626900 + AT_rich Low_complexity Low_complexity 1 22 0 612 250 81 17 chr20 22526982 22527154 -49626728 - MER5A DNA MER1_type 0 189 7 2545 44 3 0 chr20 22527162 22527459 -49626423 + AluSp SINE Alu 1 298 -15 2080 136 0 0 chr20 22528022 22528317 -49625565 + AluSx SINE Alu 4 298 -14 1308 189 62 38 chr20 22528349 22528480 -49625402 + AluJo SINE Alu 6 132 -180 2425 73 0 10 chr20 22528480 22528780 -49625102 + AluSg SINE Alu 1 297 -13 1308 189 62 38 chr20 22528780 22528939 -49624943 + AluJo SINE Alu 132 303 -9 2099 106 3 14 chr20 22530049 22530341 -49623541 + AluSg SINE Alu 1 289 -21 1772 114 24 4 chr20 22530601 22530847 -49623035 + AluSg SINE Alu 1 251 -59 25 31 0 0 chr20 22531925 22531957 -49621925 + AT_rich Low_complexity Low_complexity 1 32 0 1637 168 14 24 chr20 22532864 22533156 -49620726 + AluJo SINE Alu 1 289 -23 2259 116 0 0 chr20 22533161 22533471 -49620411 + AluSq SINE Alu 1 310 -3 2120 118 0 7 chr20 22533477 22533766 -49620116 + AluSx SINE Alu 1 287 -25 26 0 0 0 chr20 22533767 22533793 -49620089 + AT_rich Low_complexity Low_complexity 1 26 0 2110 100 0 48 chr20 22535222 22535367 -49618515 + AluSg SINE Alu 1 125 -185 2310 90 3 7 chr20 22535367 22535677 -49618205 + AluSc SINE Alu 1 309 0 2110 100 0 48 chr20 22535677 22535840 -49618042 + AluSg SINE Alu 125 294 -16 458 178 28 161 chr20 22536123 22536254 -49617628 - MER58B DNA MER1_type -2079 341 239 206 32 32 0 chr20 22536254 22536285 -49617597 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 458 178 28 161 chr20 22536285 22536333 -49617549 - MER58B DNA MER1_type -2181 239 186 977 187 43 66 chr20 22536550 22536807 -49617075 + AluJo SINE Alu 23 273 -39 255 318 81 52 chr20 22536951 22537124 -49616758 + MER5B DNA MER1_type 1 178 0 641 191 122 0 chr20 22537273 22537388 -49616494 + FLAM_A SINE Alu 1 129 -4 2370 110 0 0 chr20 22537761 22538070 -49615812 + AluSq SINE Alu 1 309 -4 261 0 0 0 chr20 22539089 22539118 -49614764 + (CA)n Simple_repeat Simple_repeat 2 30 0 27 49 0 0 chr20 22539508 22539549 -49614333 + AT_rich Low_complexity Low_complexity 1 41 0 2334 105 0 0 chr20 22539886 22540182 -49613700 + AluSx SINE Alu 1 296 -16 328 203 166 31 chr20 22540335 22540498 -49613384 + L1MC5 LINE L1 7659 7843 -118 2010 122 44 0 chr20 22541307 22541602 -49612280 + AluSx SINE Alu 1 308 -4 252 118 0 0 chr20 22542031 22542086 -49611796 - Alu SINE Alu 0 302 248 330 26 0 0 chr20 22543361 22543400 -49610482 + (GGA)n Simple_repeat Simple_repeat 1 39 0 299 259 0 37 chr20 22543896 22544004 -49609878 - L1M4 LINE L1 -2871 3275 3172 3284 144 19 0 chr20 22544103 22544624 -49609258 + L1PA16 LINE L1 5524 6054 -112 2023 150 3 0 chr20 22544624 22544931 -49608951 - AluSx SINE Alu -4 308 1 1119 97 26 7 chr20 22545740 22545894 -49607988 - AluSg SINE Alu -153 157 1 1034 98 0 46 chr20 22545896 22545948 -49607934 + MER51B-int LTR ERV1 6086 6139 -1677 2340 95 0 3 chr20 22545948 22546254 -49607628 + AluY SINE Alu 2 306 -5 1034 98 0 46 chr20 22546254 22546375 -49607507 + MER51B-int LTR ERV1 6139 6251 -1565 1578 135 0 4 chr20 22546376 22546605 -49607277 + MER51B-int LTR ERV1 7578 7805 -11 1609 109 157 4 chr20 22546617 22546884 -49606998 + MER51B LTR ERV1 1 308 -69 2481 62 3 0 chr20 22547132 22547424 -49606458 + AluY SINE Alu 1 293 -18 2313 92 0 10 chr20 22547654 22547958 -49605924 + AluSx SINE Alu 1 301 -11 1159 159 0 10 chr20 22548088 22548283 -49605599 + AluSg/x SINE Alu 118 310 0 1975 120 3 3 chr20 22548774 22549066 -49604816 - AluSx SINE Alu -20 292 1 1120 171 11 0 chr20 22549076 22549257 -49604625 - AluSg/x SINE Alu -22 288 106 1779 103 84 7 chr20 22549257 22549530 -49604352 - AluSx SINE Alu -14 298 5 2151 119 7 0 chr20 22550508 22550810 -49603072 + AluSx SINE Alu 1 304 -8 4751 48 5 13 chr20 22550944 22551552 -49602330 - SVA Other Other -760 626 24 22 0 0 0 chr20 22552197 22552219 -49601663 + AT_rich Low_complexity Low_complexity 1 22 0 290 232 217 14 chr20 22552256 22552394 -49601488 + L1MC4a LINE L1 5496 5661 -460 937 109 0 0 chr20 22552658 22552786 -49601096 - FLAM_C SINE Alu -5 128 1 241 185 19 19 chr20 22553272 22553326 -49600556 + GA-rich Low_complexity Low_complexity 5 58 0 213 149 0 21 chr20 22553518 22553565 -49600317 + (CAG)n Simple_repeat Simple_repeat 1 46 0 594 203 28 57 chr20 22554278 22554455 -49599427 + MER33 DNA MER1_type 13 184 -140 5185 106 38 45 chr20 22554472 22554661 -49599221 - L1PA12 LINE L1 0 6168 5979 2528 47 7 7 chr20 22554661 22554957 -49598925 - AluY SINE Alu -15 296 1 5185 106 38 45 chr20 22554957 22555007 -49598875 - L1PA12 LINE L1 -189 5979 5930 2259 110 10 0 chr20 22555007 22555307 -49598575 - AluSq SINE Alu -10 303 1 5185 106 38 45 chr20 22555307 22555908 -49597974 - L1PA12 LINE L1 -238 5930 5333 560 184 0 0 chr20 22555915 22556018 -49597864 + MER33 DNA MER1_type 222 324 0 265 245 28 19 chr20 22556276 22556382 -49597500 + MLT2F LTR ERVL 206 312 -351 275 302 35 9 chr20 22556406 22556522 -49597360 + LTR16A LTR ERVL 13 131 -319 363 261 27 9 chr20 22556820 22556931 -49596951 + MLT2E LTR ERVL 189 301 -327 1602 124 22 102 chr20 22556986 22557308 -49596574 + AluJo SINE Alu 1 296 -16 591 244 106 6 chr20 22558042 22558222 -49595660 - MLT2F LTR ERVL -465 198 1 309 250 67 67 chr20 22558667 22558831 -49595051 + L1MC4a LINE L1 5794 5957 -1851 2403 82 3 0 chr20 22559296 22559588 -49594294 - AluSp SINE Alu -15 298 6 1977 106 0 8 chr20 22560657 22560922 -49592960 - AluSg SINE Alu -19 291 29 703 265 140 28 chr20 22561509 22562152 -49591730 + HAL1 LINE L1 757 1495 -1012 545 143 0 0 chr20 22562176 22562253 -49591629 - THE1C LTR MaLR 0 375 299 21 0 0 0 chr20 22563789 22563810 -49590072 + AT_rich Low_complexity Low_complexity 1 21 0 2017 144 17 0 chr20 22566152 22566451 -49587431 + AluSx SINE Alu 5 308 -4 2127 132 0 0 chr20 22566472 22566767 -49587115 - AluY SINE Alu -16 295 1 347 274 44 9 chr20 22567206 22567319 -49586563 + L2 LINE L2 3196 3312 -1 288 0 0 0 chr20 22568020 22568052 -49585830 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 604 204 26 33 chr20 22569996 22570148 -49583734 + MIR SINE MIR 40 190 -72 1926 133 4 4 chr20 22570316 22570634 -49583248 + AluSx SINE Alu 3 320 0 531 277 193 25 chr20 22570686 22571007 -49582875 + LTR16A1 LTR ERVL 7 381 -76 589 244 26 44 chr20 22571867 22572095 -49581787 + L1MDa LINE L1 2411 2683 -3983 869 245 57 0 chr20 22572232 22572444 -49581438 - MER58A DNA MER1_type 0 224 1 223 323 23 54 chr20 22572653 22572783 -49581099 + MIR SINE MIR 20 146 -62 1871 203 158 26 chr20 22572787 22573295 -49580587 - MLT1G LTR MaLR -2 588 14 712 241 19 51 chr20 22573536 22573752 -49580130 - LTR16A1 LTR ERVL 0 457 249 2496 215 67 42 chr20 22574122 22574722 -49579160 - L1 LINE L1 -1166 4980 4360 1761 122 12 104 chr20 22574722 22575058 -49578824 - AluSx SINE Alu 0 312 8 2496 215 67 42 chr20 22575058 22575127 -49578755 - L1 LINE L1 -1786 4360 4294 343 251 107 15 chr20 22575248 22575426 -49578456 + MER58 DNA MER1_type 15 2418 -2 345 241 102 102 chr20 22575438 22575491 -49578391 - L1MC/D LINE L1 -2037 5771 5719 958 100 8 0 chr20 22575491 22575621 -49578261 - FLAM_C SINE Alu -2 131 1 345 241 102 102 chr20 22575621 22575812 -49578070 - L1MC/D LINE L1 -2088 5720 5527 547 248 101 38 chr20 22576287 22576629 -49577253 + LTR43 LTR ERV1 180 450 -62 228 243 208 21 chr20 22576906 22577050 -49576832 - L1P LINE L1 -1097 5049 4879 319 273 137 48 chr20 22577065 22577526 -49576356 - L1MC/D LINE L1 -1299 4847 4346 1169 161 0 0 chr20 22577558 22577750 -49576132 + L1PBa LINE L1 1 192 -6671 9950 152 28 32 chr20 22577753 22579195 -49574687 + L1PBa LINE L1 995 2441 -4421 2389 82 7 10 chr20 22579195 22579501 -49574381 - AluY SINE Alu -6 305 1 9950 152 28 32 chr20 22579501 22580337 -49573545 + L1PBa LINE L1 2441 3279 -3583 2282 111 7 0 chr20 22580337 22580635 -49573247 - AluSx SINE Alu -12 300 1 9950 152 28 32 chr20 22580635 22582136 -49571746 + L1PBa LINE L1 3279 4986 -1876 236 219 0 16 chr20 22582971 22583035 -49570847 + A-rich Low_complexity Low_complexity 2 64 0 2456 95 0 0 chr20 22583170 22583476 -49570406 - AluSx SINE Alu -6 306 1 2097 118 38 0 chr20 22583537 22583826 -49570056 - AluSx SINE Alu -12 300 1 266 235 0 0 chr20 22583889 22583957 -49569925 + A-rich Low_complexity Low_complexity 1 68 0 1398 153 21 8 chr20 22584091 22584326 -49569556 + AluSg/x SINE Alu 73 310 0 996 84 65 39 chr20 22585272 22585453 -49568429 + AluSg/x SINE Alu 125 309 0 345 312 40 29 chr20 22587540 22587713 -49566169 + MER5B DNA MER1_type 4 178 0 378 0 0 0 chr20 22587769 22587811 -49566071 + (TG)n Simple_repeat Simple_repeat 2 43 0 293 244 33 33 chr20 22587938 22588028 -49565854 - MIR SINE MIR -3 259 170 2229 102 0 34 chr20 22588663 22588986 -49564896 + AluSx SINE Alu 1 312 0 1350 178 6 88 chr20 22589000 22589320 -49564562 - AluJb SINE Alu -18 294 1 21 0 0 0 chr20 22589523 22589544 -49564338 + AT_rich Low_complexity Low_complexity 1 21 0 2204 105 3 10 chr20 22589738 22590042 -49563840 + AluSx SINE Alu 1 302 -10 1007 120 114 0 chr20 22591593 22591751 -49562131 - AluSp SINE Alu -4 309 134 2406 92 3 10 chr20 22591751 22592065 -49561817 - AluSp SINE Alu -1 312 1 231 342 74 40 chr20 22592766 22592915 -49560967 - MER5B DNA MER1_type -24 154 1 331 280 76 8 chr20 22592945 22593063 -49560819 + L2 LINE L2 3144 3269 -3 2019 121 0 0 chr20 22593656 22593929 -49559953 + AluSx SINE Alu 23 295 -17 1699 152 35 21 chr20 22594394 22594513 -49559369 + AluJb SINE Alu 3 119 -193 2406 86 3 6 chr20 22594513 22594827 -49559055 + AluSp SINE Alu 1 313 0 1699 152 35 21 chr20 22594827 22594996 -49558886 + AluJb SINE Alu 119 295 -17 478 255 39 33 chr20 22595022 22595175 -49558707 - L2 LINE L2 0 3313 3160 29 28 0 0 chr20 22595696 22595732 -49558150 + AT_rich Low_complexity Low_complexity 1 36 0 2297 90 0 3 chr20 22595733 22596021 -49557861 - AluSx SINE Alu -25 287 1 224 197 131 0 chr20 22596615 22596676 -49557206 - L2 LINE L2 -16 3256 3188 2523 82 0 0 chr20 22596739 22597045 -49556837 - AluSq SINE Alu -7 306 1 1043 121 52 11 chr20 22597331 22597505 -49556377 - L1MB3 LINE L1 -1 6182 6002 1791 148 79 3 chr20 22597826 22598116 -49555766 + AluSx SINE Alu 1 312 0 196 250 18 36 chr20 22598209 22598265 -49555617 + MIR3 SINE MIR 104 158 -50 1496 137 76 36 chr20 22599171 22599324 -49554558 - AluJo SINE Alu -15 297 152 198 0 0 0 chr20 22599324 22599346 -49554536 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2224 101 0 0 chr20 22599346 22599632 -49554250 - AluSx SINE Alu -26 286 1 1496 137 76 36 chr20 22599632 22599754 -49554128 - AluJo SINE Alu -159 153 10 2428 84 3 0 chr20 22599857 22600155 -49553727 + AluSx SINE Alu 1 299 -13 669 210 0 8 chr20 22600297 22600421 -49553461 + FLAM_A SINE Alu 1 123 -10 2267 109 0 0 chr20 22600430 22600742 -49553140 + AluSx SINE Alu 1 312 0 871 230 176 15 chr20 22601853 22602188 -49551694 + MER113 DNA MER1_type? 46 434 -87 985 81 0 0 chr20 22602459 22602582 -49551300 - AluSx SINE Alu -23 289 167 1120 169 42 0 chr20 22602582 22602771 -49551111 - L1M4c LINE L1 -6168 216 20 641 231 59 0 chr20 22602812 22602981 -49550901 - MER104 DNA MER2_type -1 179 1 1108 135 6 0 chr20 22603163 22603319 -49550563 - AluSx SINE Alu -155 157 1 1184 193 24 0 chr20 22603496 22603703 -49550179 + L1M4c LINE L1 219 430 -5954 * 4883 165 22 3 chr20 22603695 22604545 -49549337 + L1MB3 LINE L1 5310 6175 -8 1552 186 181 8 chr20 22604668 22605066 -49548816 - MLT1C LTR MaLR 0 467 1 375 271 93 43 chr20 22605078 22605346 -49548536 - L1MC/D LINE L1 -481 5640 5459 1330 168 0 31 chr20 22605346 22605572 -49548310 - AluJb SINE Alu -7 305 87 2157 142 22 32 chr20 22605576 22605984 -49547898 - L1MB2 LINE L1 -1 6170 5767 2193 101 7 0 chr20 22606083 22606371 -49547511 - AluSq SINE Alu -23 290 1 452 243 27 0 chr20 22606915 22607026 -49546856 - MIR SINE MIR -32 230 117 506 249 25 103 chr20 22607712 22607993 -49545889 - L1MC5 LINE L1 -78 7883 7625 1782 133 56 7 chr20 22608040 22608326 -49545556 - AluSx SINE Alu -3 309 10 327 261 108 71 chr20 22608433 22608764 -49545118 - L1ME4a LINE L1 -94 6027 5710 729 178 0 0 chr20 22608764 22608882 -49545000 - FLAM_C SINE Alu -15 118 1 327 261 108 71 chr20 22608882 22609028 -49544854 - L1ME4a LINE L1 -411 5710 5534 2353 88 3 3 chr20 22609028 22609324 -49544558 + AluSx SINE Alu 1 296 -16 327 261 108 71 chr20 22609324 22609396 -49544486 - L1ME4a LINE L1 -587 5534 5466 482 146 36 45 chr20 22609396 22609506 -49544376 - AluJb SINE Alu -81 231 123 1411 145 8 13 chr20 22609703 22609938 -49543944 + MER46A DNA MER2_type 3 236 0 607 197 111 49 chr20 22611796 22612040 -49541842 - HAL1 LINE L1 -1043 1464 1206 927 188 69 69 chr20 22612044 22612262 -49541620 - MER58A DNA MER1_type -5 219 2 400 265 197 45 chr20 22612297 22612723 -49541159 - HAL1 LINE L1 -1854 653 163 1859 163 16 32 chr20 22612744 22613057 -49540825 - AluJo SINE Alu -4 308 1 590 196 27 0 chr20 22613460 22613572 -49540310 + MLT1C LTR MaLR 1 115 -352 * 1056 190 19 19 chr20 22613564 22613775 -49540107 + MLT1C LTR MaLR 256 466 -1 3364 101 140 16 chr20 22614179 22614742 -49539140 - LTR10E LTR ERV1 0 633 1 493 251 175 0 chr20 22614802 22614973 -49538909 - HAL1 LINE L1 -680 1827 1627 598 267 286 12 chr20 22615049 22615476 -49538406 - HAL1 LINE L1 -1807 700 157 414 256 60 41 chr20 22615651 22615917 -49537965 - L1M4 LINE L1 -3111 3035 2765 260 319 95 35 chr20 22616128 22616360 -49537522 - HAL1 LINE L1 -766 1741 1496 2117 136 0 0 chr20 22616381 22616675 -49537207 + AluSx SINE Alu 1 294 -18 2659 117 40 13 chr20 22616915 22617384 -49536498 - L1MCa LINE L1 -5010 1416 935 14528 124 27 12 chr20 22617388 22618677 -49535205 + Tigger1 DNA MER2_type 2 1270 -1148 2460 58 0 10 chr20 22618677 22618972 -49534910 - AluY SINE Alu -19 292 1 14528 124 27 12 chr20 22618972 22619665 -49534217 + Tigger1 DNA MER2_type 1270 2025 -393 2227 114 0 0 chr20 22619665 22619954 -49533928 + AluSx SINE Alu 1 289 -23 14528 124 27 12 chr20 22619954 22620239 -49533643 + Tigger1 DNA MER2_type 2025 2304 -114 2448 84 0 0 chr20 22620239 22620535 -49533347 - AluSg SINE Alu -14 296 1 937 141 16 76 chr20 22620537 22620721 -49533161 - AluJb SINE Alu -15 297 125 588 182 10 0 chr20 22620721 22620820 -49533062 + Tigger1 DNA MER2_type 2318 2417 -1 3932 175 109 4 chr20 22620821 22621650 -49532232 - L1MCa LINE L1 -5494 932 17 210 167 0 0 chr20 22621758 22621794 -49532088 + T-rich Low_complexity Low_complexity 1 36 0 3831 162 44 11 chr20 22621958 22622704 -49531178 - L1MB7 LINE L1 -9 6175 5405 2350 105 0 3 chr20 22622786 22623099 -49530783 - AluSq SINE Alu 0 313 2 1818 117 58 11 chr20 22623884 22624158 -49529724 + AluJb SINE Alu 13 299 -13 2274 111 3 0 chr20 22624158 22624455 -49529427 + AluSg SINE Alu 1 299 -11 675 277 119 37 chr20 22624455 22625091 -49528791 - L2 LINE L2 -39 3274 2575 613 230 118 45 chr20 22625198 22625616 -49528266 - MLT1H LTR MaLR 0 595 76 966 108 0 0 chr20 22626136 22626265 -49527617 + AluSg/x SINE Alu 174 302 -8 1316 130 72 2 chr20 22626265 22626492 -49527390 + THE1-int LTR MaLR 397 690 -961 2454 110 8 8 chr20 22626529 22626884 -49526998 - THE1A LTR MaLR 0 355 1 10831 96 50 8 chr20 22626884 22628001 -49525881 - THE1A-int LTR MaLR 0 1580 382 2335 116 0 0 chr20 22628001 22628304 -49525578 - AluSx SINE Alu -9 303 1 10831 96 50 8 chr20 22628304 22628702 -49525180 - THE1A-int LTR MaLR -1198 382 2 2155 124 14 33 chr20 22628703 22629065 -49524817 - THE1A LTR MaLR 0 355 1 29 0 0 0 chr20 22629305 22629334 -49524548 + AT_rich Low_complexity Low_complexity 1 29 0 2469 80 3 6 chr20 22629492 22629804 -49524078 - AluY SINE Alu 0 311 1 2151 139 0 0 chr20 22630247 22630557 -49523325 - AluSx SINE Alu -2 310 1 184 277 100 51 chr20 22632346 22632519 -49521363 - MIR3 SINE MIR -60 148 2 26 0 0 0 chr20 22633293 22633319 -49520563 + AT_rich Low_complexity Low_complexity 1 26 0 1562 186 51 0 chr20 22633362 22633636 -49520246 - AluJo SINE Alu -24 288 1 418 289 87 44 chr20 22637132 22637144 -49516738 - L1MC5 LINE L1 -37 7924 7914 1907 129 26 32 chr20 22637144 22637455 -49516427 - AluSx SINE Alu -3 309 1 418 289 87 44 chr20 22637455 22637809 -49516073 - L1MC5 LINE L1 -47 7914 7542 253 226 48 0 chr20 22638941 22639003 -49514879 + MIR SINE MIR 116 180 -82 203 345 0 0 chr20 22639012 22639096 -49514786 - MIR SINE MIR -169 93 10 187 300 29 0 chr20 22639142 22639212 -49514670 + L2 LINE L2 3175 3246 -26 930 208 9 61 chr20 22639900 22639970 -49513912 + MER63 DNA MER1_type 666 738 -323 2229 100 0 49 chr20 22639970 22640162 -49513720 - AluSq SINE Alu 0 313 142 2500 78 3 0 chr20 22640162 22640471 -49513411 - AluY SINE Alu -1 310 1 2229 100 0 49 chr20 22640471 22640607 -49513275 - AluSq SINE Alu -171 142 1 930 208 9 61 chr20 22640607 22640767 -49513115 + MER63 DNA MER1_type 738 884 -177 769 158 15 30 chr20 22640799 22640932 -49512950 - FLAM_C SINE Alu -12 131 1 271 156 133 44 chr20 22640944 22641034 -49512848 + MER63 DNA MER1_type 897 994 -68 3879 113 0 8 chr20 22641360 22641889 -49511993 - MER1A DNA MER1_type -1 526 2 10774 38 7 93 chr20 22642015 22643525 -49510357 + SVA Other Other 3 1383 -3 1936 112 28 7 chr20 22643621 22643906 -49509976 - AluSx SINE Alu -21 291 1 310 261 54 0 chr20 22644329 22644440 -49509442 - MIR SINE MIR -82 180 64 2043 117 10 36 chr20 22644516 22644683 -49509199 - AluSx SINE Alu -13 299 129 216 0 0 0 chr20 22644683 22644707 -49509175 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2097 113 0 11 chr20 22644707 22644991 -49508891 - AluSg SINE Alu -29 281 1 2043 117 10 36 chr20 22644991 22645129 -49508753 - AluSx SINE Alu -181 131 1 2594 55 3 3 chr20 22645140 22645450 -49508432 - AluY SINE Alu 0 311 2 2191 115 7 0 chr20 22646004 22646300 -49507582 + AluSx SINE Alu 1 298 -14 468 250 61 0 chr20 22647005 22647153 -49506729 - MIR SINE MIR -60 202 46 2154 123 0 10 chr20 22647511 22647820 -49506062 + AluSx SINE Alu 1 306 -6 2002 187 81 49 chr20 22647923 22648453 -49505429 - L1MC4 LINE L1 -5 8037 7491 * 7487 194 37 54 chr20 22648451 22649080 -49504802 - L1 LINE L1 -3390 3818 3180 2104 128 3 10 chr20 22649080 22649385 -49504497 - AluSq SINE Alu -8 305 3 7487 194 37 54 chr20 22649385 22650568 -49503314 - L1 LINE L1 -4028 3180 2057 321 47 0 0 chr20 22650568 22650611 -49503271 + (TG)n Simple_repeat Simple_repeat 2 44 0 7487 194 37 54 chr20 22650611 22651284 -49502598 - L1 LINE L1 -5151 2057 1374 845 255 185 4 chr20 22651318 22651577 -49502305 - L1 LINE L1 -6424 785 480 2335 175 71 54 chr20 22651704 22651734 -49502148 + L1M4 LINE L1 4700 4728 -1418 2011 148 0 3 chr20 22651734 22652037 -49501845 - AluSx SINE Alu -10 302 1 2335 175 71 54 chr20 22652037 22652600 -49501282 + L1M4 LINE L1 4728 5303 -843 3677 213 60 10 chr20 22652603 22653471 -49500411 + L1M4 LINE L1 3525 4435 -1711 3539 209 102 13 chr20 22653467 22654613 -49499269 + L1MC/D LINE L1 4160 5464 -838 * 497 239 1 45 chr20 22655415 22655546 -49498336 - MER5B DNA MER1_type -50 139 4 385 240 39 0 chr20 22656074 22656178 -49497704 - MLT1L LTR MaLR -4 611 504 269 171 159 9 chr20 22656183 22656263 -49497619 + MIR SINE MIR 57 143 -67 1978 156 0 13 chr20 22656478 22656792 -49497090 + AluJb SINE Alu 1 310 -2 207 231 19 0 chr20 22657050 22657102 -49496780 + GA-rich Low_complexity Low_complexity 4 56 0 415 128 23 70 chr20 22657110 22657196 -49496686 + L1MC4 LINE L1 7961 8042 0 574 289 12 31 chr20 22658867 22658910 -49494972 - L1MC4a LINE L1 -1888 5920 5878 1940 158 10 0 chr20 22658910 22659207 -49494675 - AluSx SINE Alu -12 300 1 574 289 12 31 chr20 22659207 22659419 -49494463 - L1MC4a LINE L1 -1930 5878 5670 2261 105 0 0 chr20 22659800 22660095 -49493787 + AluSx SINE Alu 1 295 -17 209 297 30 20 chr20 22660261 22660362 -49493520 - MIR SINE MIR 0 262 161 1745 210 63 71 chr20 22660383 22660913 -49492969 - MLT1H LTR MaLR 0 590 33 2105 117 0 23 chr20 22660913 22661221 -49492661 + AluSx SINE Alu 1 301 -11 1745 210 63 71 chr20 22661221 22661242 -49492640 - MLT1H LTR MaLR -557 33 13 1097 189 0 0 chr20 22661250 22661435 -49492447 + MER58A DNA MER1_type 40 224 0 2530 62 3 0 chr20 22662029 22662337 -49491545 + AluY SINE Alu 1 309 -2 228 255 82 20 chr20 22662376 22662474 -49491408 + L1MC/D LINE L1 5832 5935 -1873 32 0 0 0 chr20 22662480 22662512 -49491370 + AT_rich Low_complexity Low_complexity 1 32 0 1294 180 77 31 chr20 22662515 22662941 -49490941 + MLT1D LTR MaLR 13 498 -7 191 27 0 108 chr20 22662941 22662961 -49490921 + (TA)n Simple_repeat Simple_repeat 1 17 -16 1333 187 154 23 chr20 22662961 22663357 -49490525 - LTR7 LTR ERV1 -2 448 1 191 27 0 108 chr20 22663357 22663373 -49490509 + (TA)n Simple_repeat Simple_repeat 17 33 0 2099 125 0 0 chr20 22663425 22663713 -49490169 - AluSg SINE Alu -9 301 14 341 223 223 0 chr20 22663892 22664013 -49489869 + MER5A DNA MER1_type 42 189 0 2254 98 10 0 chr20 22664813 22665108 -49488774 + AluSc SINE Alu 1 298 -11 2521 126 0 8 chr20 22665371 22665728 -49488154 + THE1B LTR MaLR 11 364 0 683 265 22 5 chr20 22666223 22666408 -49487474 - L1MB7 LINE L1 -10 6174 5987 210 233 0 0 chr20 22666757 22666817 -49487065 + (TG)n Simple_repeat Simple_repeat 1 60 0 1840 159 7 7 chr20 22667417 22667713 -49486169 + AluJo SINE Alu 1 296 -16 456 167 12 0 chr20 22667901 22667985 -49485897 + AluSg/x SINE Alu 207 291 -19 774 164 23 0 chr20 22667996 22668124 -49485758 + AluJ SINE Alu 2 132 -180 2040 106 29 0 chr20 22668847 22669122 -49484760 + AluSx SINE Alu 30 312 0 955 162 0 54 chr20 22669421 22669625 -49484257 + AluJ SINE Alu 120 312 0 989 200 71 11 chr20 22670116 22670400 -49483482 + L1MC4a LINE L1 6980 7270 -538 503 279 41 23 chr20 22670933 22671152 -49482730 + L1MEc LINE L1 2136 2358 -4038 374 212 0 0 chr20 22671271 22671337 -49482545 - MLT1H1 LTR MaLR -474 81 16 447 320 109 39 chr20 22671569 22672028 -49481854 - LTR16C LTR ERVL 0 491 1 325 313 67 13 chr20 22672199 22672349 -49481533 - MIR SINE MIR -70 192 35 1373 208 148 54 chr20 22672473 22672900 -49480982 - MLT1C LTR MaLR 0 467 1 189 241 130 0 chr20 22674010 22674064 -49479818 - L2 LINE L2 -2 3311 3251 1683 200 108 25 chr20 22674247 22674717 -49479165 + L1MC4a LINE L1 6790 7298 -510 4941 130 87 36 chr20 22674718 22675729 -49478153 + pTR5 LTR ERV1 743 2020 -418 329 231 29 19 chr20 22675729 22675833 -49478049 + LTR30 LTR ERV1 539 643 -79 2359 101 0 0 chr20 22675833 22676159 -49477723 + pTR5 LTR ERV1 67 392 -2046 1095 189 168 101 chr20 22676163 22676490 -49477392 + L1MD3 LINE L1 7475 7844 -151 2229 70 0 91 chr20 22676490 22676831 -49477051 - AluY SINE Alu -1 310 1 1095 189 168 101 chr20 22676831 22676968 -49476914 + L1MD3 LINE L1 7844 7970 -25 1477 139 46 17 chr20 22677000 22677237 -49476645 + AluSq SINE Alu 7 250 -63 318 60 40 0 chr20 22677345 22677395 -49476487 + AluSq SINE Alu 249 300 0 2391 67 0 51 chr20 22677462 22677776 -49476106 + AluY SINE Alu 1 298 -13 2130 100 48 0 chr20 22677787 22678077 -49475805 + AluSx SINE Alu 1 304 -8 1225 110 11 21 chr20 22678748 22678939 -49474943 - AluSg/x SINE Alu -3 307 119 2694 81 0 18 chr20 22678949 22679333 -49474549 - L1PB1 LINE L1 -1 6150 5774 2313 106 0 0 chr20 22679369 22679661 -49474221 + AluSg SINE Alu 1 292 -18 2188 140 0 0 chr20 22679677 22679977 -49473905 + AluSx SINE Alu 3 302 -10 621 282 39 11 chr20 22680064 22680245 -49473637 + MER91A DNA MER1_type 1 186 -10 4098 181 62 26 chr20 22680582 22681583 -49472299 - L1MB3 LINE L1 0 6183 5151 633 187 89 8 chr20 22681583 22681706 -49472176 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr20 22681723 22681745 -49472137 + AT_rich Low_complexity Low_complexity 1 22 0 419 138 46 18 chr20 22681774 22681883 -49471999 + CT-rich Low_complexity Low_complexity 1 112 0 591 202 0 34 chr20 22681889 22682008 -49471874 - AluSg/x SINE Alu 0 310 196 419 200 86 0 chr20 22682038 22682143 -49471739 - L1MB3 LINE L1 -1056 5090 4977 5447 127 20 16 chr20 22682143 22682963 -49470919 - Tigger1 DNA MER2_type 0 2418 1593 2046 119 26 7 chr20 22682963 22683266 -49470616 - AluSx SINE Alu -3 309 1 5447 127 20 16 chr20 22683266 22683301 -49470581 - Tigger1 DNA MER2_type -825 1593 1560 1680 152 8 13 chr20 22683298 22683653 -49470229 - Tigger1 DNA MER2_type -2009 409 1 * 858 246 22 0 chr20 22684619 22684798 -49469084 + MER3 DNA MER1_type 1 183 -26 780 191 7 0 chr20 22685233 22685369 -49468513 - MLT1H LTR MaLR -13 536 400 262 222 183 94 chr20 22685988 22686168 -49467714 - MARNA DNA Mariner -11 575 380 298 195 49 80 chr20 22686180 22686303 -49467579 - MLT1L LTR MaLR -5 610 460 258 170 64 0 chr20 22686324 22686371 -49467511 + MER81 DNA DNA 36 85 -29 691 290 72 60 chr20 22686377 22686990 -49466892 + MER49 LTR ERV1 21 842 -81 618 242 37 91 chr20 22687512 22688010 -49465872 - MLT2F LTR ERVL 0 663 5 869 192 32 41 chr20 22688637 22688867 -49465015 + L1ME2 LINE L1 5800 6038 -126 2348 76 0 41 chr20 22689174 22689490 -49464392 + AluY SINE Alu 1 303 -8 254 203 0 181 chr20 22689745 22689883 -49463999 - MLT1H LTR MaLR -16 533 421 22 35 0 0 chr20 22691230 22691259 -49462623 + AT_rich Low_complexity Low_complexity 1 29 0 450 0 0 0 chr20 22691296 22691346 -49462536 + (TC)n Simple_repeat Simple_repeat 1 50 0 888 200 43 143 chr20 22691389 22691849 -49462033 + L1ME3A LINE L1 5494 5907 -263 435 285 29 0 chr20 22691852 22691989 -49461893 + L1ME3A LINE L1 6027 6167 -3 757 194 0 0 chr20 22692732 22692866 -49461016 - L1PB4 LINE L1 -2 6154 6021 575 260 89 65 chr20 22692980 22693226 -49460656 + MLT1H LTR MaLR 76 327 -222 1670 161 14 21 chr20 22693318 22693609 -49460273 + L1MC/D LINE L1 5423 5711 -622 296 109 0 0 chr20 22693609 22693655 -49460227 + THE1B LTR MaLR 1 46 -382 232 167 0 37 chr20 22693657 22693711 -49460171 - L1PB4 LINE L1 -12 6144 6093 2050 134 6 34 chr20 22693717 22694045 -49459837 + THE1B LTR MaLR 46 364 0 11357 85 34 14 chr20 22694045 22695595 -49458287 + THE1B-int LTR MaLR 1 1580 0 2232 121 36 36 chr20 22695595 22695959 -49457923 + THE1B LTR MaLR 1 364 0 3198 153 49 21 chr20 22695959 22696569 -49457313 + L1MC1 LINE L1 5707 6333 0 360 223 0 64 chr20 22696569 22696636 -49457246 + MLT1H LTR MaLR 483 549 0 340 239 22 22 chr20 22698064 22698156 -49455726 + L1ME LINE L1 5468 5559 -605 241 116 70 0 chr20 22698156 22698199 -49455683 - MER63 DNA MER1_type -151 685 14 281 118 196 0 chr20 22698228 22698279 -49455603 - LTR67 LTR ERVL 0 557 497 227 330 0 21 chr20 22700394 22700491 -49453391 + LTR67 LTR ERVL 461 555 -2 1149 224 104 84 chr20 22700608 22701059 -49452823 + MLT1H LTR MaLR 51 510 -39 1733 97 120 0 chr20 22701231 22701490 -49452392 - MER51B LTR ERV1 0 377 88 1974 78 21 47 chr20 22701490 22702066 -49451816 - MER61-int LTR ERV1 -2582 2635 1923 877 217 13 94 chr20 22702088 22702387 -49451495 + L1MC4 LINE L1 7768 8042 0 185 294 159 18 chr20 22703131 22703294 -49450588 - MIR SINE MIR -56 206 21 202 216 0 0 chr20 22703952 22703989 -49449893 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 186 289 0 0 chr20 22704254 22704299 -49449583 + MER5B DNA MER1_type 3 47 -131 * 423 236 11 0 chr20 22704295 22704384 -49449498 - MER5B DNA MER1_type -88 90 1 260 215 31 0 chr20 22704436 22704501 -49449381 - MER5A DNA MER1_type 0 189 123 299 146 21 0 chr20 22704503 22704551 -49449331 + L1MA3 LINE L1 12 60 -7505 4828 48 10 0 chr20 22704558 22705143 -49448739 - LTR10C LTR ERV1 0 591 1 1074 60 0 0 chr20 22705235 22705369 -49448513 - LTR10C LTR ERV1 -457 134 1 1055 60 0 0 chr20 22705461 22705595 -49448287 - LTR10C LTR ERV1 -457 134 1 22190 140 24 31 chr20 22705605 22707879 -49446003 + L1MA3 LINE L1 72 2362 -5362 289 160 0 0 chr20 22707879 22707929 -49445953 - Alu SINE Alu 0 302 253 1543 178 25 25 chr20 22707938 22708224 -49445658 - AluJb SINE Alu -26 286 1 22190 140 24 31 chr20 22708224 22712183 -49441699 + L1MA3 LINE L1 2370 7724 0 243 158 53 18 chr20 22712191 22712248 -49441634 - MER5A DNA MER1_type -49 140 82 562 268 85 46 chr20 22712387 22712496 -49441386 + MIR SINE MIR 3 106 -156 1116 234 165 18 chr20 22712496 22712897 -49440985 + LTR40b LTR ERVL 3 462 0 562 268 85 46 chr20 22712897 22713039 -49440843 + MIR SINE MIR 106 259 -3 2349 86 23 3 chr20 22713238 22713540 -49440342 + AluSp SINE Alu 1 308 -5 388 372 87 9 chr20 22713589 22713820 -49440062 + L3 LINE CR1 198 446 -1131 229 266 217 21 chr20 22713867 22714010 -49439872 + L3 LINE CR1 566 736 -841 318 255 72 78 chr20 22714215 22714368 -49439514 - MIR SINE MIR -71 191 40 225 239 57 34 chr20 22714459 22714547 -49439335 + L3 LINE CR1 1156 1245 -332 2555 46 16 0 chr20 22715201 22715507 -49438375 - AluY SINE Alu 0 311 1 331 246 318 0 chr20 22716619 22716883 -49436999 - L3 LINE CR1 -150 1427 1080 22 0 0 0 chr20 22718087 22718109 -49435773 + AT_rich Low_complexity Low_complexity 1 22 0 1602 239 64 8 chr20 22718867 22719382 -49434500 + L1M4 LINE L1 2869 3412 -2734 293 269 81 12 chr20 22720437 22720597 -49433285 + L1ME4a LINE L1 5841 6011 -110 43822 42 9 1 chr20 22720598 22726698 -49427184 + L1PA4 LINE L1 2 6155 0 2376 94 3 0 chr20 22728346 22728643 -49425239 - AluSq SINE Alu -15 298 1 837 182 28 0 chr20 22728748 22728891 -49424991 + MER3 DNA MER1_type 62 208 -1 262 260 48 10 chr20 22729164 22729268 -49424614 + L1M4c LINE L1 1284 1391 -4993 2806 163 72 49 chr20 22729277 22729988 -49423894 + L1MCa LINE L1 874 1600 -4826 207 0 0 0 chr20 22730094 22730117 -49423765 + (CAA)n Simple_repeat Simple_repeat 2 24 0 693 173 130 45 chr20 22730155 22730175 -49423707 + L1MCa LINE L1 2052 2069 -4357 1942 143 0 17 chr20 22730175 22730475 -49423407 + AluSx SINE Alu 1 295 -17 693 173 130 45 chr20 22730475 22730701 -49423181 + L1MCa LINE L1 2069 2250 -4176 237 33 0 0 chr20 22730874 22730904 -49422978 + (CA)n Simple_repeat Simple_repeat 2 31 0 246 62 0 0 chr20 22733769 22733801 -49420081 + (TG)n Simple_repeat Simple_repeat 1 32 0 2240 92 3 30 chr20 22733912 22734238 -49419644 - AluSc SINE Alu 0 309 1 1845 157 13 20 chr20 22735366 22735666 -49418216 - AluJb SINE Alu -14 298 1 287 251 88 47 chr20 22735801 22735972 -49417910 + L2 LINE L2 2175 2352 -962 455 287 70 47 chr20 22736084 22736485 -49417397 + L2 LINE L2 2566 2975 -339 1441 121 49 186 chr20 22737200 22737655 -49416227 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr20 22737985 22738014 -49415868 + AT_rich Low_complexity Low_complexity 1 29 0 1886 139 73 3 chr20 22738378 22738665 -49415217 - AluJb SINE Alu 0 312 6 2233 129 0 35 chr20 22739369 22739717 -49414165 - MER1B DNA MER1_type -1 336 1 347 279 39 41 chr20 22739810 22740014 -49413868 + L1ME LINE L1 5605 5811 -351 1644 158 10 53 chr20 22740044 22740347 -49413535 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr20 22740347 22740369 -49413513 + AT_rich Low_complexity Low_complexity 1 22 0 418 77 0 0 chr20 22740805 22740857 -49413025 + AluSg/x SINE Alu 212 263 -46 207 150 50 50 chr20 22740958 22741018 -49412864 - MER5C DNA MER1_type -234 90 31 464 146 67 0 chr20 22741325 22741414 -49412468 + L1MB2 LINE L1 6077 6171 0 233 29 0 29 chr20 22741742 22741777 -49412105 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 283 228 26 6 chr20 22742872 22742962 -49410920 - Charlie8 DNA MER1_type 0 2417 253 360 280 77 16 chr20 22743389 22743571 -49410311 + MLT1L LTR MaLR 203 395 -220 231 309 18 9 chr20 22743773 22743883 -49409999 - MIR3 SINE MIR -89 119 9 254 333 120 0 chr20 22743910 22744027 -49409855 - L2 LINE L2 -5 3308 3178 1309 108 0 31 chr20 22746029 22746224 -49407658 + MER30B DNA MER1_type 2 190 0 475 316 47 9 chr20 22748725 22748940 -49404942 + LTR16C LTR ERVL 73 295 -196 610 291 95 27 chr20 22750212 22750655 -49403227 + HAL1 LINE L1 2028 2500 -7 678 320 55 31 chr20 22751483 22751905 -49401977 + L1ME LINE L1 5357 5788 -333 1631 140 4 0 chr20 22752827 22753062 -49400820 + AluJb SINE Alu 49 284 -28 249 299 194 0 chr20 22753530 22753674 -49400208 + MER5A DNA MER1_type 18 189 0 909 258 186 11 chr20 22754171 22754543 -49399339 + L1MB8 LINE L1 5742 6178 0 2351 166 42 21 chr20 22756669 22757145 -49396737 + MER66B LTR ERV1 1 486 0 218 253 76 38 chr20 22757218 22757297 -49396585 + L3b LINE CR1 1408 1489 -94 733 283 172 16 chr20 22757913 22758291 -49395591 + MLT1L LTR MaLR 173 609 -6 968 198 32 0 chr20 22758823 22759010 -49394872 + MER20 DNA MER1_type 27 219 0 1497 281 76 36 chr20 22760371 22761150 -49392732 + L1M4 LINE L1 3495 4304 -1842 1824 149 4 14 chr20 22761216 22761497 -49392385 - AluJb SINE Alu -22 290 13 339 113 0 0 chr20 22762805 22762858 -49391024 + (CA)n Simple_repeat Simple_repeat 2 54 0 313 172 203 0 chr20 22762876 22762940 -49390942 + Tigger5 DNA MER2_type 2 78 -2245 457 184 0 0 chr20 22762943 22763019 -49390863 - Tigger5 DNA MER2_type -6 2317 2242 404 198 12 0 chr20 22763009 22763090 -49390792 + Tigger5 DNA MER2_type 2242 2323 0 * 306 211 26 0 chr20 22763402 22763478 -49390404 - MER116 DNA Mariner 0 80 3 5054 144 26 23 chr20 22764401 22765255 -49388627 + Tigger2 DNA MER2_type 1 856 -1862 906 193 12 12 chr20 22765248 22765414 -49388468 + Tigger2 DNA MER2_type 2553 2718 0 * 244 186 0 0 chr20 22766546 22766589 -49387293 + 5S rRNA rRNA 1 43 -78 270 254 16 0 chr20 22767840 22767903 -49385979 - MIR3 SINE MIR -48 160 97 1902 105 6 87 chr20 22769996 22770319 -49383563 - AluSx SINE Alu -15 297 1 1251 245 98 25 chr20 22770488 22770965 -49382917 + L1MEc LINE L1 37 548 -5848 580 263 78 0 chr20 22770975 22771154 -49382728 + L1MEc LINE L1 594 786 -5610 322 172 0 17 chr20 22771926 22771984 -49381898 - MER94 DNA DNA 0 134 78 311 289 61 0 chr20 22773312 22773426 -49380456 + MER5C DNA MER1_type 1 121 -203 2271 107 0 0 chr20 22773427 22773718 -49380164 + AluSx SINE Alu 1 291 -21 799 33 39 39 chr20 22773718 22773898 -49379984 + (TA)n Simple_repeat Simple_repeat 1 180 0 483 178 50 0 chr20 22773927 22774028 -49379854 - MER33 DNA MER1_type -170 154 49 228 149 0 0 chr20 22774289 22774336 -49379546 + (TG)n Simple_repeat Simple_repeat 2 48 0 557 221 204 12 chr20 22776932 22777104 -49376778 + MER3 DNA MER1_type 1 205 -4 1118 143 43 29 chr20 22777280 22777489 -49376393 - MER20 DNA MER1_type -4 215 4 2528 67 0 0 chr20 22777783 22778081 -49375801 + AluY SINE Alu 1 298 -13 850 255 97 86 chr20 22778129 22779206 -49374676 + HAL1 LINE L1 822 1909 -598 198 211 0 58 chr20 22780311 22780363 -49373519 - L2 LINE L2 -3 3310 3262 796 151 0 46 chr20 22781415 22781567 -49372315 + L1PB3 LINE L1 6008 6152 -2 1088 195 225 45 chr20 22781810 22782274 -49371608 + L1MC4a LINE L1 7317 7807 -3 204 97 0 0 chr20 22782293 22782324 -49371558 + (CA)n Simple_repeat Simple_repeat 2 32 0 382 249 213 27 chr20 22783093 22783314 -49370568 + MLT1L LTR MaLR 323 584 -31 1841 79 0 0 chr20 22784171 22784400 -49369482 + AluY SINE Alu 73 301 -10 1071 178 30 51 chr20 22784407 22784643 -49369239 + MER46A DNA MER2_type 4 234 -2 2216 95 3 3 chr20 22784836 22785132 -49368750 - AluY SINE Alu -15 296 1 2384 94 3 0 chr20 22785229 22785536 -49368346 + AluSp SINE Alu 1 308 -5 1689 157 7 31 chr20 22786105 22786392 -49367490 + AluJo SINE Alu 1 280 -32 1097 135 0 0 chr20 22786402 22786476 -49367406 + (GGGAA)n Simple_repeat Simple_repeat 1 252 0 1097 135 0 0 chr20 22786476 22786654 -49367228 + (GGGAA)n Simple_repeat Simple_repeat 1 178 0 672 199 48 14 chr20 22788091 22788237 -49365645 + MER3 DNA MER1_type 3 153 -56 2230 117 0 3 chr20 22788474 22788773 -49365109 - AluSx SINE Alu -14 298 1 2348 80 10 7 chr20 22788955 22789257 -49364625 + AluSx SINE Alu 1 303 -9 332 172 0 0 chr20 22790302 22790317 -49363565 + MER3 DNA MER1_type 33 47 -162 401 80 0 0 chr20 22790317 22790367 -49363515 - MER3 DNA MER1_type 0 209 160 5240 141 13 6 chr20 22790367 22791202 -49362680 - L1PA16 LINE L1 -3 6163 5323 3671 188 10 8 chr20 22791209 22791982 -49361900 + L1PA16 LINE L1 4558 5331 -831 1917 151 6 22 chr20 22791985 22792297 -49361585 - AluJo SINE Alu -5 307 1 668 188 69 31 chr20 22792297 22792457 -49361425 - MER3 DNA MER1_type -43 166 1 314 171 136 11 chr20 22792460 22792548 -49361334 + MER97b DNA MER1_type? 74 172 -881 488 262 144 39 chr20 22793603 22793958 -49359924 + L2 LINE L2 2922 3313 0 1529 164 59 0 chr20 22794343 22794599 -49359283 + AluJo SINE Alu 40 310 -2 372 263 147 77 chr20 22794820 22795249 -49358633 + L2 LINE L2 2855 3313 0 777 249 144 21 chr20 22795365 22795454 -49358428 + L1ME4a LINE L1 5270 5347 -774 341 43 21 0 chr20 22795454 22795501 -49358381 + (CA)n Simple_repeat Simple_repeat 1 48 0 777 249 144 21 chr20 22795501 22795989 -49357893 + L1ME4a LINE L1 5347 5921 -200 1221 201 88 27 chr20 22796959 22797253 -49356629 + AluJo SINE Alu 1 312 0 1110 262 50 58 chr20 22797306 22797561 -49356321 + L1MCa LINE L1 3 4294967224 -6117 1996 156 0 0 chr20 22797561 22797856 -49356026 + AluSx SINE Alu 1 295 -17 1110 262 50 58 chr20 22797856 22798222 -49355660 + L1MCa LINE L1 -73 294 -5751 3368 271 45 73 chr20 22798661 22799984 -49353898 + MER21-int LTR ERV1 2014 3299 -892 1646 239 241 14 chr20 22799984 22800620 -49353262 - L1MCa LINE L1 -4151 2275 1496 732 139 66 0 chr20 22801608 22801730 -49352152 + AluJ SINE Alu 3 132 -170 904 201 0 0 chr20 22801782 22801941 -49351941 + AluJ SINE Alu 120 278 -34 372 350 63 30 chr20 22805794 22806303 -49347579 + L1ME4a LINE L1 5443 5968 -153 330 266 0 0 chr20 22806303 22806431 -49347451 + (TA)n Simple_repeat Simple_repeat 1 128 0 1492 228 44 11 chr20 22806765 22807243 -49346639 + MLT1F LTR MaLR 1 540 -2 264 183 0 67 chr20 22809086 22809146 -49344736 - L2 LINE L2 0 3272 3217 1951 167 0 0 chr20 22809903 22810196 -49343686 - AluJb SINE Alu -19 293 1 2081 144 3 0 chr20 22811675 22811973 -49341909 - AluSx SINE Alu -13 299 1 292 90 42 0 chr20 22815498 22815552 -49338330 + L1MD3 LINE L1 7034 7107 -697 338 154 77 3 chr20 22815552 22815674 -49338208 + MER53 DNA DNA 1 171 -18 284 247 13 52 chr20 22815700 22815777 -49338105 + MLT1F1 LTR MaLR 46 119 -448 2225 147 148 60 chr20 22815781 22816327 -49337555 + L1MD3 LINE L1 7402 7995 0 1743 122 67 100 chr20 22817965 22818139 -49335743 - MER7A DNA MER2_type -2692 346 191 2063 137 52 25 chr20 22818139 22818504 -49335378 + THE1C LTR MaLR 1 375 0 1743 122 67 100 chr20 22818504 22818689 -49335193 - MER7A DNA MER2_type -2847 191 1 837 155 8 0 chr20 22818780 22818909 -49334973 - FLAM_C SINE Alu -2 131 2 312 303 76 20 chr20 22819453 22819706 -49334176 - L1M4 LINE L1 -340 5824 5567 635 149 0 0 chr20 22819727 22819821 -49334061 + AluS SINE Alu 1 94 -218 364 104 0 0 chr20 22819825 22819873 -49334009 + AluS SINE Alu 52 99 -203 319 305 54 71 chr20 22819883 22819986 -49333896 - L1M4 LINE L1 -2319 5489 5386 2088 137 0 7 chr20 22819986 22820278 -49333604 - AluJo SINE Alu -22 290 1 319 305 54 71 chr20 22820278 22820413 -49333469 - L1M4 LINE L1 -2422 5386 5255 1118 235 81 47 chr20 22820436 22820477 -49333405 + L1M4 LINE L1 4499 4537 -1609 2525 70 0 0 chr20 22820477 22820776 -49333106 + AluY SINE Alu 1 299 -12 1118 235 81 47 chr20 22820776 22821181 -49332701 + L1M4 LINE L1 4537 4960 -1186 807 186 23 12 chr20 22821183 22821355 -49332527 + L1MD2 LINE L1 6183 6356 -3 22 0 0 0 chr20 22821450 22821472 -49332410 + AT_rich Low_complexity Low_complexity 1 22 0 2045 152 0 3 chr20 22821627 22821929 -49331953 + AluJb SINE Alu 1 301 -11 1742 106 121 19 chr20 22821932 22822196 -49331686 - AluSx SINE Alu -21 291 1 2676 78 0 8 chr20 22822211 22822569 -49331313 - L1PA8 LINE L1 0 6172 5818 1018 49 0 0 chr20 22823699 22823821 -49330061 + AluY SINE Alu 177 298 -13 351 0 0 0 chr20 22823919 22823958 -49329924 + (CA)n Simple_repeat Simple_repeat 2 40 0 228 175 0 0 chr20 22823969 22824009 -49329873 + L2 LINE L2 2947 2986 -327 1238 181 98 4 chr20 22824107 22824373 -49329509 + MLT1F LTR MaLR 1 291 -251 659 150 25 17 chr20 22824366 22824486 -49329396 + MLT1F LTR MaLR 420 540 -2 * 514 238 88 13 chr20 22824995 22825230 -49328652 + L1MD3 LINE L1 7661 7987 -8 380 223 292 38 chr20 22825611 22825827 -49328055 + MLT1J2 LTR MaLR 124 435 -15 2367 102 3 3 chr20 22826077 22826390 -49327492 + AluSp SINE Alu 1 313 0 285 260 0 77 chr20 22826584 22826688 -49327194 + L1MC5 LINE L1 7833 7928 -33 2086 118 78 26 chr20 22827685 22828031 -49325851 - THE1B LTR MaLR 0 364 1 1672 196 28 0 chr20 22828742 22829028 -49324854 - AluJb SINE Alu -18 294 1 180 0 0 0 chr20 22829034 22829054 -49324828 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 492 204 26 26 chr20 22830382 22830495 -49323387 + MER5B DNA MER1_type 5 117 -61 2030 132 4 0 chr20 22830697 22831007 -49322875 + AluSx SINE Alu 1 311 0 200 280 0 67 chr20 22831473 22831548 -49322334 - L2 LINE L2 -90 3223 3154 3876 223 50 38 chr20 22831772 22831892 -49321990 + MER45B DNA AcHobo 1 118 -1463 1707 172 0 49 chr20 22831892 22832217 -49321665 - AluJo SINE Alu -3 309 1 3876 223 50 38 chr20 22832217 22832547 -49321335 + MER45B DNA AcHobo 118 442 -1139 2256 58 4 0 chr20 22832547 22832821 -49321061 + AluY SINE Alu 37 311 0 3876 223 50 38 chr20 22832821 22833128 -49320754 + MER45B DNA AcHobo 442 778 -803 2247 57 0 0 chr20 22833128 22833390 -49320492 - AluY SINE Alu -6 305 44 3876 223 50 38 chr20 22833390 22833641 -49320241 + MER45B DNA AcHobo 778 1024 -16 534 232 0 0 chr20 22833776 22833888 -49319994 - MER5B DNA MER1_type -66 112 1 21 0 0 0 chr20 22834880 22834901 -49318981 + AT_rich Low_complexity Low_complexity 1 21 0 232 280 112 14 chr20 22835485 22835628 -49318254 - MIR3 SINE MIR -29 179 23 222 91 0 0 chr20 22836963 22836996 -49316886 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 1608 186 3 18 chr20 22836999 22837284 -49316598 - AluJo SINE Alu -31 281 1 348 304 16 21 chr20 22837983 22838177 -49315705 + L1ME2 LINE L1 5661 5853 -311 210 71 0 0 chr20 22838270 22838298 -49315584 + (CA)n Simple_repeat Simple_repeat 2 29 0 1147 169 71 4 chr20 22838298 22838512 -49315370 + L1MC4 LINE L1 7480 7711 -331 2353 106 3 0 chr20 22838933 22839245 -49314637 + AluSp SINE Alu 1 313 0 846 163 0 27 chr20 22839579 22839726 -49314156 + FLAM_C SINE Alu 1 143 0 702 251 34 10 chr20 22839842 22840049 -49313833 + L1MC4 LINE L1 7692 7903 -139 4369 163 46 31 chr20 22840095 22840605 -49313277 + L1MB3 LINE L1 4964 5465 -718 243 61 0 0 chr20 22840605 22840638 -49313244 + (CA)n Simple_repeat Simple_repeat 2 34 0 4369 163 46 31 chr20 22840638 22841217 -49312665 + L1MB3 LINE L1 5465 6072 -111 2446 100 0 0 chr20 22841217 22841518 -49312364 + AluSx SINE Alu 1 301 -11 4369 163 46 31 chr20 22841518 22841632 -49312250 + L1MB3 LINE L1 6072 6183 0 22 35 0 0 chr20 22842949 22842978 -49310904 + AT_rich Low_complexity Low_complexity 1 29 0 479 254 235 15 chr20 22843411 22843890 -49309992 + L2 LINE L2 2732 3308 -5 588 164 0 0 chr20 22843910 22844020 -49309862 + (TGGA)n Simple_repeat Simple_repeat 1 110 0 271 281 30 103 chr20 22845084 22845287 -49308595 - MER5A DNA MER1_type 0 189 2 455 239 0 7 chr20 22849236 22849378 -49304504 + (CA)n Simple_repeat Simple_repeat 2 142 0 938 196 98 25 chr20 22850000 22850235 -49303647 - L1MA9 LINE L1 -50 6262 6011 183 296 37 0 chr20 22850380 22850461 -49303421 - L2 LINE L2 -1218 2096 2013 903 158 14 0 chr20 22850786 22850932 -49302950 + MER45A DNA AcHobo 31 178 0 2166 208 44 52 chr20 22851119 22851486 -49302396 + L1MD3 LINE L1 7429 7792 -203 2241 97 0 10 chr20 22851486 22851794 -49302088 + AluY SINE Alu 1 305 -6 2166 208 44 52 chr20 22851794 22851989 -49301893 + L1MD3 LINE L1 7792 7987 -8 2442 97 131 11 chr20 22852118 22852500 -49301382 + MSTA LTR MaLR 1 428 0 2213 114 3 10 chr20 22852545 22852851 -49301031 + AluJb SINE Alu 1 304 -8 2420 84 3 3 chr20 22852851 22853159 -49300723 + AluSp SINE Alu 1 308 -5 2522 102 8 30 chr20 22854086 22854458 -49299424 - THE1B LTR MaLR 0 364 1 297 0 0 0 chr20 22858240 22858273 -49295609 + (CA)n Simple_repeat Simple_repeat 2 34 0 507 324 19 0 chr20 22858377 22858584 -49295298 - L2 LINE L2 -617 2697 2487 2302 98 0 3 chr20 22858910 22859205 -49294677 + AluSc SINE Alu 2 295 -14 1977 48 4 4 chr20 22859830 22860070 -49293812 + L1PA8 LINE L1 5921 6163 -9 2579 54 0 0 chr20 22860070 22860365 -49293517 - AluY SINE Alu -16 295 1 2203 208 51 5 chr20 22860597 22861247 -49292635 + L1MC4a LINE L1 7091 7808 0 1575 184 29 29 chr20 22861253 22861563 -49292319 + AluJo SINE Alu 1 310 -2 23 33 0 0 chr20 22861585 22861615 -49292267 + AT_rich Low_complexity Low_complexity 1 30 0 449 295 6 30 chr20 22861677 22861843 -49292039 - L2 LINE L2 -862 2452 2291 284 296 48 40 chr20 22861881 22862131 -49291751 + L1MC4a LINE L1 4568 4819 -1327 42 20 0 0 chr20 22862155 22862204 -49291678 + AT_rich Low_complexity Low_complexity 1 49 0 2199 108 3 10 chr20 22862423 22862730 -49291152 + AluSx SINE Alu 1 305 -7 888 152 15 0 chr20 22863003 22863135 -49290747 + AluJ SINE Alu 1 134 -178 2277 109 0 0 chr20 22863135 22863429 -49290453 + AluSq SINE Alu 1 294 -19 369 0 0 0 chr20 22863434 22863475 -49290407 + (TG)n Simple_repeat Simple_repeat 2 42 0 327 217 75 47 chr20 22863499 22863605 -49290277 - L1MC4 LINE L1 -1339 6703 6595 1103 146 0 27 chr20 22863625 22863810 -49290072 + AluJ SINE Alu 133 312 0 638 285 146 77 chr20 22863832 22864468 -49289414 + L1MC4a LINE L1 5352 6031 -1777 818 189 7 0 chr20 22864584 22864737 -49289145 + L1M4 LINE L1 4697 4850 -1296 214 124 90 0 chr20 22864740 22864829 -49289053 + (TA)n Simple_repeat Simple_repeat 1 97 0 1806 143 0 63 chr20 22865334 22865635 -49288247 - AluJo SINE Alu -23 289 8 778 226 36 65 chr20 22866908 22867187 -49286695 + MLT1G LTR MaLR 19 289 -301 267 256 0 0 chr20 22867259 22867349 -49286533 + GA-rich Low_complexity Low_complexity 4 93 0 389 258 11 0 chr20 22867864 22867957 -49285925 + MER81 DNA DNA 1 94 -20 819 97 26 0 chr20 22868043 22868156 -49285726 + AluJb SINE Alu 1 116 -196 393 253 0 10 chr20 22868836 22868935 -49284947 + L2 LINE L2 3139 3236 -36 2286 119 0 0 chr20 22869189 22869501 -49284381 + AluSx SINE Alu 1 312 0 594 254 77 30 chr20 22869537 22869771 -49284111 + MIR SINE MIR 16 251 -11 2791 26 0 0 chr20 22869814 22870122 -49283760 + AluYa5 SINE Alu 1 308 -3 1193 109 0 0 chr20 22870124 22870280 -49283602 + AluSg/x SINE Alu 132 287 -25 22 0 0 0 chr20 22870287 22870309 -49283573 + AT_rich Low_complexity Low_complexity 1 22 0 1849 173 0 7 chr20 22871220 22871520 -49282362 - AluJo SINE Alu -14 298 1 711 180 23 8 chr20 22871758 22871886 -49281996 + FLAM_A SINE Alu 1 130 -3 1833 133 7 36 chr20 22872700 22873002 -49280880 + AluJb SINE Alu 5 297 -15 23 0 0 0 chr20 22873125 22873148 -49280734 + AT_rich Low_complexity Low_complexity 1 23 0 505 231 86 8 chr20 22873409 22873526 -49280356 + MER33 DNA MER1_type 1 126 -198 2673 190 40 139 chr20 22873547 22873698 -49280184 + L1MC1 LINE L1 2995 3159 -2987 484 53 0 0 chr20 22873698 22873755 -49280127 + U6 snRNA snRNA 1 57 -50 2673 190 40 139 chr20 22873755 22874134 -49279748 + L1MC1 LINE L1 3159 3574 -2572 2304 128 0 0 chr20 22874134 22874446 -49279436 + AluSx SINE Alu 1 312 0 2673 190 40 139 chr20 22874446 22874689 -49279193 + L1MC1 LINE L1 3574 3695 -2451 1898 119 19 0 chr20 22874689 22874950 -49278932 + AluSx SINE Alu 1 266 -46 2673 190 40 139 chr20 22874950 22875207 -49278675 + L1MC1 LINE L1 3695 3976 -2170 38815 28 23 1 chr20 22875208 22880624 -49273258 - L1PA2 LINE L1 -1 6154 616 2172 129 3 0 chr20 22880627 22880930 -49272952 - AluSx SINE Alu -8 304 1 4738 179 47 53 chr20 22880935 22882673 -49271209 + L1MC1 LINE L1 3981 5698 -635 2364 109 0 0 chr20 22882673 22882985 -49270897 + AluSx SINE Alu 1 312 0 4738 179 47 53 chr20 22882985 22883327 -49270555 + L1MC1 LINE L1 5698 6041 -292 2307 82 0 39 chr20 22883339 22883644 -49270238 + AluY SINE Alu 1 293 -18 3806 67 41 0 chr20 22883650 22884142 -49269740 + L1PA7 LINE L1 5635 6146 -8 325 265 10 0 chr20 22884161 22884259 -49269623 + L1MEc LINE L1 1567 1665 -4731 1740 135 29 44 chr20 22884459 22884799 -49269083 + L1MB8 LINE L1 5843 6177 -1 414 0 0 0 chr20 22884947 22884993 -49268889 + (CA)n Simple_repeat Simple_repeat 2 47 0 1484 127 35 96 chr20 22885094 22885408 -49268474 + L1MC1 LINE L1 6039 6333 0 835 142 39 63 chr20 22885412 22885617 -49268265 + MER33 DNA MER1_type 124 323 -1 405 274 17 0 chr20 22886250 22886367 -49267515 + MIR SINE MIR 63 181 -81 2056 140 0 10 chr20 22886578 22886885 -49266997 + AluSx SINE Alu 1 304 -8 181 300 0 17 chr20 22887702 22887762 -49266120 + MIR SINE MIR 81 139 -123 225 336 14 64 chr20 22887822 22887962 -49265920 + MIR3 SINE MIR 13 145 -63 194 295 0 16 chr20 22888680 22888741 -49265141 + MIR SINE MIR 81 140 -122 245 237 0 93 chr20 22889007 22889104 -49264778 - Charlie7 DNA MER1_type 0 2612 2525 461 250 40 57 chr20 22889118 22889166 -49264716 - Charlie7 DNA MER1_type -1923 689 642 2199 108 3 26 chr20 22889166 22889472 -49264410 + AluSq SINE Alu 1 299 -14 461 250 40 57 chr20 22889472 22889501 -49264381 - Charlie7 DNA MER1_type -1970 642 614 1694 186 35 25 chr20 22889501 22889818 -49264064 - 7SLRNA srpRNA srpRNA 0 320 1 461 250 40 57 chr20 22889818 22889987 -49263895 - Charlie7 DNA MER1_type -1998 614 446 260 247 82 10 chr20 22890091 22890188 -49263694 - Charlie7 DNA MER1_type -2412 200 97 294 268 158 8 chr20 22890634 22890880 -49263002 - L1ME4a LINE L1 -239 5882 5600 1920 145 7 7 chr20 22891375 22891672 -49262210 + AluSx SINE Alu 1 297 -15 903 169 7 19 chr20 22891811 22891965 -49261917 + FRAM SINE Alu 8 159 -17 21 0 0 0 chr20 22892007 22892028 -49261854 + AT_rich Low_complexity Low_complexity 1 21 0 181 28 111 0 chr20 22892736 22892772 -49261110 + T-rich Low_complexity Low_complexity 1 40 0 2251 105 0 0 chr20 22892775 22893079 -49260803 - AluSx SINE Alu -8 304 1 187 244 81 23 chr20 22894745 22894831 -49259051 + MIR SINE MIR 125 215 -47 1069 117 56 6 chr20 22895035 22895215 -49258667 + L1MC4 LINE L1 7356 7544 -498 2113 120 3 0 chr20 22895243 22895534 -49258348 - AluSp SINE Alu -10 303 12 1807 113 0 4 chr20 22895642 22895890 -49257992 + AluSx SINE Alu 60 306 -6 702 165 53 43 chr20 22895994 22896182 -49257700 - Charlie1 DNA MER1_type 0 2761 2572 488 195 0 0 chr20 22896180 22896267 -49257615 - Charlie1 DNA MER1_type -2571 190 104 * 2245 110 3 3 chr20 22896271 22896570 -49257312 + AluSq SINE Alu 1 299 -14 1402 280 74 62 chr20 22896608 22897340 -49256542 + MER21B LTR ERV1 6 746 -117 2250 107 7 0 chr20 22897378 22897678 -49256204 - AluSx SINE Alu -8 304 3 502 284 112 14 chr20 22897682 22897967 -49255915 + L2 LINE L2 2398 2710 -604 324 274 85 101 chr20 22897978 22898343 -49255539 + L2 LINE L2 2872 3230 -42 280 100 0 0 chr20 22898581 22898621 -49255261 - AluY SINE Alu -123 178 139 904 97 0 0 chr20 22898622 22898735 -49255147 + AluY SINE Alu 180 292 -19 2446 88 0 0 chr20 22898764 22899061 -49254821 - AluSg SINE Alu -13 297 1 3730 150 11 21 chr20 22899063 22899716 -49254166 + L1MB2 LINE L1 5526 6171 0 440 186 41 121 chr20 22899748 22899897 -49253985 - MLT1L LTR MaLR -119 466 289 311 257 140 15 chr20 22900263 22900399 -49253483 - MLT1L LTR MaLR -456 159 7 315 252 72 27 chr20 22900474 22900585 -49253297 - L1ME LINE L1 -459 5662 5547 1659 142 71 18 chr20 22900585 22900866 -49253016 + AluJo SINE Alu 1 296 -16 261 75 0 0 chr20 22900866 22900906 -49252976 + (TA)n Simple_repeat Simple_repeat 2 41 0 747 211 0 0 chr20 22901023 22901156 -49252726 + FLAM_C SINE Alu 1 133 0 2217 110 3 0 chr20 22901378 22901678 -49252204 - AluSx SINE Alu -11 301 1 418 215 234 19 chr20 22901739 22901897 -49251985 - MLT1J LTR MaLR -30 481 290 1514 205 0 7 chr20 22902090 22902388 -49251494 - AluJo SINE Alu -16 296 1 2310 87 10 10 chr20 22902657 22902968 -49250914 + AluSx SINE Alu 1 311 -1 417 242 103 36 chr20 22903370 22903564 -49250318 + MIR SINE MIR 10 216 -46 471 180 36 27 chr20 22904216 22904327 -49249555 + LTR37B LTR ERV1 8 119 -349 2060 115 21 0 chr20 22904370 22904656 -49249226 - AluSx SINE Alu -20 292 1 1348 170 5 0 chr20 22904660 22904872 -49249010 - AluJo SINE Alu -12 300 88 705 169 116 110 chr20 22904881 22905200 -49248682 + LTR37B LTR ERV1 148 468 0 1656 196 43 23 chr20 22905301 22905527 -49248355 - MER68 LTR ERV1 -2 560 323 1958 86 116 8 chr20 22905527 22905795 -49248087 - AluSg SINE Alu -13 297 1 1656 196 43 23 chr20 22905795 22905915 -49247967 - MER68 LTR ERV1 -239 323 207 685 289 43 17 chr20 22906271 22906506 -49247376 + LTR67 LTR ERVL 2 242 -315 371 340 32 0 chr20 22906620 22906776 -49247106 + LTR67 LTR ERVL 391 551 -6 869 158 0 0 chr20 22907108 22907241 -49246641 + FLAM_A SINE Alu 1 133 0 256 255 124 72 chr20 22907253 22907370 -49246512 + L2 LINE L2 3146 3274 -39 2314 162 74 0 chr20 22907370 22907789 -49246093 - LTR47A LTR ERVL -2 450 1 256 255 124 72 chr20 22907789 22907824 -49246058 + L2 LINE L2 3274 3306 -7 1855 200 113 42 chr20 22907824 22907958 -49245924 + MER34 LTR ERV1 1 124 -418 2451 97 0 0 chr20 22907958 22908266 -49245616 + AluSx SINE Alu 1 308 -4 1855 200 113 42 chr20 22908266 22908637 -49245245 + MER34 LTR ERV1 124 542 0 1259 209 129 58 chr20 22908661 22909129 -49244753 + HAL1 LINE L1 1134 1644 -863 2123 117 10 0 chr20 22909129 22909419 -49244463 + AluSx SINE Alu 1 293 -19 1259 209 129 58 chr20 22909419 22909471 -49244411 + HAL1 LINE L1 1644 1691 -816 570 250 255 32 chr20 22909478 22910101 -49243781 + HAL1 LINE L1 1746 2507 0 312 301 140 28 chr20 22910108 22910530 -49243352 - L2 LINE L2 -609 2705 2237 2303 86 14 0 chr20 22911492 22911784 -49242098 - AluSc SINE Alu -13 296 1 189 294 44 0 chr20 22911924 22911992 -49241890 + L2 LINE L2 3241 3311 -2 2451 79 0 0 chr20 22912306 22912610 -49241272 + AluY SINE Alu 1 304 -7 2043 120 3 13 chr20 22913100 22913400 -49240482 + AluSx SINE Alu 1 297 -15 1067 140 17 6 chr20 22913401 22913579 -49240303 + AluSg/x SINE Alu 130 309 -1 39 80 0 0 chr20 22913597 22913685 -49240197 + AT_rich Low_complexity Low_complexity 1 88 0 886 112 8 8 chr20 22913685 22913819 -49240063 - FLAM_C SINE Alu -9 134 1 947 164 47 26 chr20 22913912 22914144 -49239738 - L1MB8 LINE L1 -6 6172 5936 197 343 138 15 chr20 22915090 22915358 -49238524 + L2 LINE L2 1487 1787 -1527 417 218 8 32 chr20 22915585 22915709 -49238173 + L1ME1 LINE L1 4976 5096 -1050 695 158 0 0 chr20 22915723 22915837 -49238045 + FLAM_C SINE Alu 3 116 -27 2841 208 110 13 chr20 22915856 22916497 -49237385 + L1ME1 LINE L1 5122 5888 -278 2388 105 0 3 chr20 22916497 22916810 -49237072 + AluSx SINE Alu 1 312 0 2841 208 110 13 chr20 22916810 22917111 -49236771 + L1ME1 LINE L1 5888 6159 -7 2362 105 0 7 chr20 22918026 22918332 -49235550 - AluSx SINE Alu -8 304 1 474 266 37 79 chr20 22918487 22918542 -49235340 + L2 LINE L2 3108 3164 -149 2346 95 16 7 chr20 22918542 22918846 -49235036 - AluSx SINE Alu -5 307 1 474 266 37 79 chr20 22918846 22919004 -49234878 + L2 LINE L2 3164 3312 -1 1989 163 34 70 chr20 22919057 22919305 -49234577 - MSTB LTR MaLR 0 426 199 2295 74 18 0 chr20 22919305 22919590 -49234292 - AluSx SINE Alu -22 290 1 1989 163 34 70 chr20 22919590 22919783 -49234099 - MSTB LTR MaLR -227 199 1 1771 159 10 20 chr20 22920417 22920713 -49233169 - AluJo SINE Alu -19 293 1 450 297 88 33 chr20 22921945 22922218 -49231664 + L1ME4a LINE L1 5830 6117 -4 7132 197 75 55 chr20 22922250 22924129 -49229753 + L1MDa LINE L1 27 1866 -4674 2554 71 7 0 chr20 22924129 22924439 -49229443 + AluSp SINE Alu 1 312 -1 7132 197 75 55 chr20 22924439 22924740 -49229142 + L1MDa LINE L1 1866 2159 -4381 897 129 0 23 chr20 22924740 22924872 -49229010 + FLAM_C SINE Alu 1 129 -4 7132 197 75 55 chr20 22924872 22925169 -49228713 + L1MDa LINE L1 2159 2640 -3900 2196 108 3 3 chr20 22925169 22925464 -49228418 - AluSg SINE Alu -15 295 1 770 240 50 6 chr20 22925476 22925772 -49228110 + L1MDa LINE L1 3494 4733 -1807 965 156 0 0 chr20 22925772 22925911 -49227971 + MER2 DNA MER2_type 1 139 -206 3053 111 12 2 chr20 22925911 22926325 -49227557 + MER1A DNA MER1_type 1 418 -111 1063 144 27 5 chr20 22926326 22926514 -49227368 + L1MD1 LINE L1 6051 6242 0 2608 54 0 0 chr20 22927337 22927634 -49226248 - AluY SINE Alu -14 297 1 1172 159 15 10 chr20 22929145 22929346 -49224536 + MER2 DNA MER2_type 1 202 -143 2286 116 0 0 chr20 22929346 22929648 -49224234 - AluSx SINE Alu -10 302 1 27 29 0 0 chr20 22929655 22929689 -49224193 + AT_rich Low_complexity Low_complexity 1 34 0 378 234 0 0 chr20 22929695 22929759 -49224123 + MER2 DNA MER2_type 282 345 0 2124 144 0 0 chr20 22930456 22930748 -49223134 - AluSx SINE Alu -20 292 1 235 106 85 0 chr20 22930915 22930962 -49222920 + LTR49 LTR ERV1 471 521 -74 21 0 0 0 chr20 22930975 22930996 -49222886 + AT_rich Low_complexity Low_complexity 1 21 0 1310 152 5 19 chr20 22931341 22931552 -49222330 - AluJo SINE Alu -18 294 87 1790 163 14 7 chr20 22931723 22932012 -49221870 + AluSx SINE Alu 1 291 -21 348 169 37 7 chr20 22932043 22932179 -49221703 + (TA)n Simple_repeat Simple_repeat 1 140 0 1667 126 28 0 chr20 22932183 22932430 -49221452 - AluSx SINE Alu -7 305 52 2028 165 24 0 chr20 22932654 22932988 -49220894 - MER2 DNA MER2_type -2 342 1 1143 167 33 0 chr20 22933688 22933903 -49219979 + L1MB2 LINE L1 5948 6169 -2 2429 57 3 29 chr20 22933929 22934244 -49219638 + AluSp SINE Alu 1 307 -6 230 308 0 13 chr20 22934703 22934781 -49219101 + L3 LINE CR1 1392 1468 -109 767 264 49 8 chr20 22934785 22935031 -49218851 - MIR SINE MIR 0 262 7 234 0 0 0 chr20 22935250 22935276 -49218606 + (A)n Simple_repeat Simple_repeat 1 26 0 242 264 0 0 chr20 22936422 22936475 -49217407 - MER5A DNA MER1_type -98 91 39 230 322 103 11 chr20 22936732 22936993 -49216889 + L2 LINE L2 1898 2182 -1132 248 263 76 42 chr20 22937883 22938001 -49215881 + MER103 DNA DNA 2 123 -43 1258 237 251 16 chr20 22938009 22938519 -49215363 + LTR41 LTR ERVL 1 630 -143 1553 187 7 14 chr20 22939241 22939525 -49214357 + AluJb SINE Alu 1 282 -30 13759 108 32 44 chr20 22940274 22941317 -49212565 + Tigger1 DNA MER2_type 40 1094 -1324 1823 185 0 0 chr20 22941317 22941604 -49212278 - AluJb SINE Alu -23 289 3 13759 108 32 44 chr20 22941604 22942236 -49211646 + Tigger1 DNA MER2_type 1094 1732 -686 2278 101 3 0 chr20 22942236 22942534 -49211348 + AluSx SINE Alu 1 299 -13 748 102 74 0 chr20 22942543 22942651 -49211231 + AluJo/FLAM SINE Alu 1 116 -186 2503 69 0 16 chr20 22942651 22942956 -49210926 - AluY SINE Alu -11 300 1 2135 107 3 30 chr20 22942956 22943256 -49210626 - AluSg SINE Alu -18 292 1 13759 108 32 44 chr20 22943256 22943627 -49210255 + Tigger1 DNA MER2_type 1738 2112 -306 2503 62 0 13 chr20 22943627 22943934 -49209948 + AluY SINE Alu 1 303 -8 1664 173 19 26 chr20 22943944 22944251 -49209631 + AluSx SINE Alu 5 309 -3 13759 108 32 44 chr20 22944251 22944388 -49209494 + Tigger1 DNA MER2_type 2121 2222 -196 2343 123 42 78 chr20 22944388 22944411 -49209471 + Tigger2a DNA MER2_type 2 24 -2684 188 35 35 0 chr20 22944411 22944440 -49209442 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5820 30 8 0 chr20 22944440 22945111 -49208771 - L1PA3 LINE L1 -10 6145 5470 2343 123 42 78 chr20 22945111 22945473 -49208409 + Tigger2a DNA MER2_type 23 372 -2336 2556 64 0 0 chr20 22945473 22945769 -49208113 - AluY SINE Alu -15 296 1 2343 123 42 78 chr20 22945769 22945830 -49208052 + Tigger2a DNA MER2_type 372 434 0 1084 149 26 10 chr20 22945830 22946024 -49207858 + Tigger1 DNA MER2_type 2220 2416 -2 248 206 37 84 chr20 22946030 22946137 -49207745 + L1MC4 LINE L1 7940 8041 -1 906 190 0 0 chr20 22946787 22946950 -49206932 - FRAM SINE Alu -2 164 2 382 288 63 35 chr20 22947416 22947701 -49206181 + L1MC4 LINE L1 7138 7430 -612 457 213 115 66 chr20 22947834 22948078 -49205804 + L1MC4 LINE L1 7689 7944 -98 527 261 35 0 chr20 22948556 22948698 -49205184 - MIR SINE MIR -23 239 93 324 234 89 32 chr20 22949128 22949252 -49204630 + MIR3 SINE MIR 9 139 -69 1689 149 4 29 chr20 22950137 22950412 -49203470 - AluJo SINE Alu -44 268 1 2158 104 17 0 chr20 22950508 22950805 -49203077 - AluSp SINE Alu -11 302 1 727 172 31 8 chr20 22951237 22951365 -49202517 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr20 22951622 22951643 -49202239 + AT_rich Low_complexity Low_complexity 1 21 0 1931 108 61 0 chr20 22951645 22951969 -49201913 + AluSx SINE Alu 1 341 0 5422 48 3 8 chr20 22952250 22952882 -49201000 + SVA Other Other 758 1386 0 6384 76 44 0 chr20 22953243 22953793 -49200089 - L1PA13 LINE L1 -1 6162 5638 1828 111 92 0 chr20 22953793 22954064 -49199818 - AluSx SINE Alu -16 296 1 6384 76 44 0 chr20 22954064 22954809 -49199073 - L1PA13 LINE L1 -525 5638 4858 2962 188 58 3 chr20 22954930 22955530 -49198352 + LTR65 LTR ERV1 1 633 -36 436 136 0 49 chr20 22955775 22955856 -49198026 - AluSx SINE Alu -16 293 217 1084 109 0 0 chr20 22955856 22955994 -49197888 - AluSx SINE Alu -174 138 1 1107 195 4 33 chr20 22955994 22956235 -49197647 - L1MA7 LINE L1 -116 6175 5942 1130 129 0 6 chr20 22956236 22956399 -49197483 - AluSp SINE Alu -15 298 137 490 103 0 0 chr20 22956400 22956468 -49197414 - L1MA7 LINE L1 -342 5949 5882 4940 145 29 8 chr20 22956474 22956836 -49197046 - L1PB4 LINE L1 -2 6154 5801 189 0 0 0 chr20 22956836 22956857 -49197025 + (TG)n Simple_repeat Simple_repeat 2 22 0 4940 145 29 8 chr20 22956857 22957315 -49196567 - L1PB4 LINE L1 -355 5801 5317 1287 172 13 0 chr20 22957383 22957615 -49196267 + L1MC2 LINE L1 5842 6076 -268 3073 25 3 0 chr20 22957615 22957969 -49195913 - L1PA4 LINE L1 -6 6149 5795 584 15 0 0 chr20 22957971 22958039 -49195843 + L1PA4 LINE L1 5716 5783 -372 1201 233 52 0 chr20 22958043 22958369 -49195513 - L1PB4 LINE L1 -815 5331 4989 706 134 150 16 chr20 22958369 22958496 -49195386 - AluJb SINE Alu -13 299 156 1468 188 30 6 chr20 22958496 22958831 -49195051 - L1PB4 LINE L1 -1153 4993 4651 * 3805 202 18 17 chr20 22958825 22959550 -49194332 + L1M2 LINE L1 2734 3471 -3377 959 65 8 0 chr20 22959550 22959672 -49194210 + L1PA7 LINE L1 6026 6150 -4 3805 202 18 17 chr20 22959672 22959937 -49193945 + L1M2 LINE L1 3471 3734 -3114 917 102 8 0 chr20 22959939 22960057 -49193825 + FLAM_C SINE Alu 13 131 -12 438 216 1 9 chr20 22960057 22960198 -49193684 + L1M2 LINE L1 3745 3884 -2964 26 30 0 0 chr20 22960255 22960288 -49193594 + AT_rich Low_complexity Low_complexity 1 33 0 1710 159 70 51 chr20 22960773 22961233 -49192649 + MER31B LTR ERV1 1 658 -3 1990 246 51 2 chr20 22961765 22962272 -49191610 - MLT1F LTR MaLR -10 532 1 21 0 0 0 chr20 22962427 22962448 -49191434 + AT_rich Low_complexity Low_complexity 1 21 0 2630 221 59 2 chr20 22962764 22963376 -49190506 + MLT1E1 LTR MaLR 1 647 -7 3484 123 15 21 chr20 22963940 22964470 -49189412 + MER1A DNA MER1_type 1 527 0 189 0 0 0 chr20 22965433 22965454 -49188428 + (TAAAAA)n Simple_repeat Simple_repeat 6 26 0 1881 165 48 14 chr20 22966269 22966620 -49187262 - MLT1A1 LTR MaLR -2 363 1 201 353 87 30 chr20 22967203 22967571 -49186311 + L2 LINE L2 2450 2838 -476 233 251 10 42 chr20 22969710 22969827 -49184055 + CT-rich Low_complexity Low_complexity 1 113 0 2475 148 52 0 chr20 22970373 22970778 -49183104 - MSTB LTR MaLR 0 426 1 1465 143 62 0 chr20 22971116 22971389 -49182493 - L1MB3 LINE L1 -7 6176 5887 236 170 19 0 chr20 22971420 22971473 -49182409 + (TA)n Simple_repeat Simple_repeat 2 55 0 1029 123 0 6 chr20 22971587 22971749 -49182133 - L1PA13 LINE L1 -1 6162 6002 1321 151 13 4 chr20 22971749 22971988 -49181894 - L1MB3 LINE L1 -295 5888 5648 1182 198 202 10 chr20 22971988 22972479 -49181403 - L1M4 LINE L1 -3519 3438 2847 2365 226 50 12 chr20 22972515 22973255 -49180627 - L1M4 LINE L1 -4660 2299 1539 2485 73 3 0 chr20 22973984 22974285 -49179597 - AluSp SINE Alu -11 302 1 333 0 0 0 chr20 22974331 22974368 -49179514 + (CA)n Simple_repeat Simple_repeat 2 38 0 360 355 65 1 chr20 22974766 22974938 -49178944 + MIR SINE MIR 37 217 -45 206 350 12 0 chr20 22975085 22975165 -49178717 - MIR3 SINE MIR -6 202 122 2315 107 0 0 chr20 22975368 22975667 -49178215 + AluSx SINE Alu 1 299 -13 2365 90 0 3 chr20 22977050 22977351 -49176531 + AluSq SINE Alu 1 300 -13 2005 111 24 14 chr20 22977708 22978043 -49175839 + AluSx SINE Alu 1 312 0 915 177 51 37 chr20 22978357 22978572 -49175310 - MER20 DNA MER1_type -1 218 1 628 120 40 0 chr20 22980960 22981060 -49172822 - U13 snRNA snRNA 0 104 1 2148 157 45 30 chr20 22981484 22981690 -49172192 - L1MC2 LINE L1 -25 6319 6118 1675 163 49 3 chr20 22981690 22981978 -49171904 - AluJb SINE Alu -9 303 3 2148 157 45 30 chr20 22981978 22982237 -49171645 - L1MC2 LINE L1 -226 6118 5847 405 302 86 48 chr20 22982405 22982779 -49171103 - L1M4 LINE L1 -2090 4056 3669 316 308 141 13 chr20 22983241 22983475 -49170407 - L1M4 LINE L1 -3023 3123 2860 606 152 15 182 chr20 22983480 22983744 -49170138 + L1PB4 LINE L1 5113 5332 -814 2656 157 44 35 chr20 22983749 22983778 -49170104 + L1PB4 LINE L1 5579 5606 -550 2163 113 0 13 chr20 22983778 22984089 -49169793 + AluSx SINE Alu 1 307 -5 2656 157 44 35 chr20 22984089 22984331 -49169551 + L1PB4 LINE L1 5606 5844 -312 2420 67 0 6 chr20 22984331 22984644 -49169238 - AluY SINE Alu 0 311 1 2656 157 44 35 chr20 22984644 22984943 -49168939 + L1PB4 LINE L1 5844 6155 -1 1886 148 39 0 chr20 22985168 22985451 -49168431 + AluSx SINE Alu 2 295 -17 708 159 0 0 chr20 22985451 22985564 -49168318 - AluJo/FLAM SINE Alu -188 114 2 1094 151 44 85 chr20 22985778 22986050 -49167832 - L1MB5 LINE L1 0 6174 5914 2638 246 63 8 chr20 22986055 22986637 -49167245 - L1M4 LINE L1 -2259 4385 3732 2133 105 10 20 chr20 22986637 22986943 -49166939 + AluSx SINE Alu 1 303 -9 2638 246 63 8 chr20 22986943 22987274 -49166608 - L1M4 LINE L1 -2912 3732 3421 21 0 0 0 chr20 22987278 22987299 -49166583 + AT_rich Low_complexity Low_complexity 1 21 0 2053 148 0 13 chr20 22987314 22987619 -49166263 + AluSx SINE Alu 1 301 -11 2254 235 17 34 chr20 22987936 22988853 -49165029 - L1M4 LINE L1 -3213 3431 2533 * 42164 39 0 4 chr20 22988843 22995045 -49158837 - L1PA4 LINE L1 0 6155 1 1180 136 12 6 chr20 22995093 22995262 -49158620 + AluSg/x SINE Alu 126 295 -17 1036 193 53 10 chr20 22995280 22995595 -49158287 - L1M4 LINE L1 -4149 2497 2077 681 162 140 29 chr20 22995595 22995731 -49158151 - AluJo SINE Alu -161 151 1 5035 217 45 44 chr20 22995752 22995956 -49157926 - L1M4 LINE L1 -4788 1858 1656 537 79 13 0 chr20 22995956 22996032 -49157850 - MADE1 DNA Mariner -2 78 2 5035 217 45 44 chr20 22996032 22996224 -49157658 - L1M4 LINE L1 -4990 1656 1466 1033 186 48 8 chr20 22996224 22996476 -49157406 - L1MA9 LINE L1 -7 6305 6044 5035 217 45 44 chr20 22996476 22997922 -49155960 - L1M4 LINE L1 -5180 1466 2 2307 78 19 16 chr20 22997990 22998299 -49155583 + AluSq SINE Alu 1 310 -3 2491 116 126 0 chr20 22998423 22998836 -49155046 - MER4C LTR ERV1 0 465 1 648 80 0 11 chr20 22998861 22998949 -49154933 - HY4 scRNA scRNA -3 90 4 15422 143 43 46 chr20 22998961 23001818 -49152064 - MER4C-int LTR ERV1 -5 6593 3728 2102 130 0 3 chr20 23001818 23002119 -49151763 - AluSx SINE Alu -12 300 1 15422 143 43 46 chr20 23002119 23002616 -49151266 - MER4C-int LTR ERV1 -2870 3728 3231 5149 70 9 0 chr20 23002616 23003270 -49150612 - PABL_A LTR ERV1 0 660 1 15422 143 43 46 chr20 23003270 23003499 -49150383 - MER4C-int LTR ERV1 -3367 3231 1906 1567 151 122 102 chr20 23003502 23004457 -49149425 - MER4-int LTR ERV1 -3623 2323 412 378 91 195 13 chr20 23004462 23004539 -49149343 - MER4C LTR ERV1 -374 91 1 4646 114 53 24 chr20 23004677 23005434 -49148448 + MER4E LTR ERV1 1 779 0 354 179 0 0 chr20 23007030 23007097 -49146785 - L1M4 LINE L1 -1383 4763 4697 700 238 115 41 chr20 23007195 23007611 -49146271 - L1MC4a LINE L1 -1945 5863 5417 860 244 136 14 chr20 23007895 23008351 -49145531 - MLT1F1 LTR MaLR 0 590 66 317 267 95 9 chr20 23008418 23008534 -49145348 - MLT1F1-int LTR MaLR -26 1345 1220 2040 110 54 48 chr20 23009410 23009764 -49144118 - Tigger3(Golem) DNA MER2_type 0 3029 2674 2988 120 59 17 chr20 23009769 23010309 -49143573 - Tigger3(Golem) DNA MER2_type -239 2790 2228 562 196 47 0 chr20 23010295 23010402 -49143480 - Tigger3(Golem) DNA MER2_type -2917 112 1 * 239 289 33 22 chr20 23013426 23013516 -49140366 - L2 LINE L2 -7 3306 3216 25 0 0 0 chr20 23014824 23014849 -49139033 + AT_rich Low_complexity Low_complexity 1 25 0 2022 138 27 0 chr20 23014951 23015248 -49138634 + AluSx SINE Alu 1 305 -7 1700 144 94 35 chr20 23015646 23015927 -49137955 + MER46B DNA MER2_type 2 183 -2548 201 39 0 0 chr20 23015927 23015953 -49137929 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1700 144 94 35 chr20 23015953 23016010 -49137872 + MER46B DNA MER2_type 183 235 -1 1576 174 7 32 chr20 23016616 23016926 -49136956 - AluJo SINE Alu -10 302 1 2732 103 73 5 chr20 23017066 23017492 -49136390 - L1MA8 LINE L1 -4 6287 5833 232 342 102 37 chr20 23018010 23018197 -49135685 + L2 LINE L2 302 500 -2814 2068 196 29 10 chr20 23018682 23019065 -49134817 + MLT1B LTR MaLR 1 390 0 731 253 71 21 chr20 23020038 23020389 -49133493 + L1ME LINE L1 991 1391 -4981 878 267 123 35 chr20 23020399 23020945 -49132937 + L1ME LINE L1 1384 2164 -4399 543 144 72 0 chr20 23021009 23021106 -49132776 - MER58 DNA MER1_type 0 2420 2317 239 284 0 15 chr20 23022695 23022762 -49131120 + MIR SINE MIR 16 81 -127 10604 206 85 15 chr20 23023162 23024611 -49129271 - L1MB3 LINE L1 -121 6298 4952 2295 98 7 3 chr20 23024611 23024908 -49128974 + AluSq SINE Alu 1 298 -15 10604 206 85 15 chr20 23024908 23025535 -49128347 - L1MB3 LINE L1 -1467 4952 4370 2233 102 0 10 chr20 23025535 23025839 -49128043 - AluSq SINE Alu -12 301 1 10604 206 85 15 chr20 23025839 23028969 -49124913 - L1MB3 LINE L1 -2049 4370 623 233 0 62 0 chr20 23028969 23029001 -49124881 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 10604 206 85 15 chr20 23029001 23029623 -49124259 - L1MB3 LINE L1 -5796 623 46 338 304 137 38 chr20 23030729 23031042 -49122840 + HAL1b LINE L1 53 396 -952 3454 133 88 13 chr20 23031060 23031675 -49122207 + L1MB3 LINE L1 5523 6183 0 1179 165 5 32 chr20 23032078 23032296 -49121586 + AluJb SINE Alu 85 296 -16 239 250 62 9 chr20 23032296 23032408 -49121474 + L1ME LINE L1 3286 3403 -2979 1121 89 0 182 chr20 23032507 23032743 -49121139 + 7SK RNA RNA 1 193 0 625 312 40 12 chr20 23032889 23033290 -49120592 + L1ME LINE L1 3781 4192 -2190 3787 209 70 25 chr20 23033323 23034396 -49119486 - L1MC4a LINE L1 0 7808 6891 670 252 135 83 chr20 23034399 23034844 -49119038 + MLT1H1 LTR MaLR 87 554 -1 1377 250 91 132 chr20 23035134 23036083 -49117799 - L2 LINE L2 -5 3308 2283 991 152 6 6 chr20 23036083 23036248 -49117634 + AluSg/x SINE Alu 136 300 -10 1377 250 91 132 chr20 23036248 23036796 -49117086 - L2 LINE L2 -1030 2283 1714 233 139 0 0 chr20 23036869 23036912 -49116970 - AluSx SINE Alu -6 296 254 1544 87 10 0 chr20 23036916 23037111 -49116771 - AluSx SINE Alu -115 197 1 437 241 30 23 chr20 23037444 23037577 -49116305 + L1MC5 LINE L1 7667 7800 -161 777 287 49 0 chr20 23038204 23038427 -49115455 - MIR SINE MIR -10 252 19 354 220 60 0 chr20 23038485 23038585 -49115297 + L1MC5 LINE L1 7808 7913 -48 320 169 281 0 chr20 23041216 23041305 -49112577 - MER5B DNA MER1_type -6 172 59 436 231 22 0 chr20 23041504 23041595 -49112287 - MER5A DNA MER1_type -83 106 14 183 42 0 0 chr20 23042281 23042305 -49111577 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 859 246 118 47 chr20 23042358 23043103 -49110779 - L1ME LINE L1 -4906 1478 806 563 345 55 12 chr20 23043512 23043842 -49110040 - L1ME LINE L1 -6014 549 206 2206 98 0 14 chr20 23046053 23046376 -49107506 - AluSq SINE Alu 0 319 1 183 114 0 0 chr20 23046446 23046481 -49107401 + (TTTTTA)n Simple_repeat Simple_repeat 6 40 0 321 227 96 106 chr20 23046591 23046789 -49107093 - L1MC4 LINE L1 -274 7768 7573 246 241 76 13 chr20 23046858 23046937 -49106945 - L1MC4a LINE L1 -540 7268 7185 * 316 307 20 0 chr20 23046934 23047035 -49106847 - L1MC4 LINE L1 -818 7224 7122 21 0 0 0 chr20 23047326 23047347 -49106535 + AT_rich Low_complexity Low_complexity 1 21 0 1720 149 63 16 chr20 23047358 23047674 -49106208 - MER44D DNA MER2_type -6 603 3 404 340 121 0 chr20 23048287 23048502 -49105380 - MIR SINE MIR -8 254 14 181 302 79 0 chr20 23048557 23048620 -49105262 - L2 LINE L2 -94 3178 3111 2501 76 0 0 chr20 23048835 23049138 -49104744 + AluSg SINE Alu 1 303 -7 833 209 130 30 chr20 23049341 23049571 -49104311 - L1ME2 LINE L1 0 6164 5912 203 304 25 25 chr20 23050028 23050107 -49103775 - MIR SINE MIR -1 261 183 2493 75 0 3 chr20 23050279 23050586 -49103296 + AluSc SINE Alu 1 306 -3 472 298 48 0 chr20 23050794 23050962 -49102920 + MIR3 SINE MIR 30 205 -3 279 262 140 9 chr20 23051412 23051519 -49102363 - L2 LINE L2 -1 3312 3192 198 0 0 0 chr20 23051742 23051764 -49102118 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2141 102 0 7 chr20 23051767 23052052 -49101830 - AluSx SINE Alu -29 283 1 402 259 238 5 chr20 23052176 23052369 -49101513 + MIR SINE MIR 15 252 -10 279 242 177 48 chr20 23052500 23052624 -49101258 - L2 LINE L2 -15 3298 3159 1971 93 30 158 chr20 23053051 23053450 -49100432 + MER7A DNA MER2_type 1 346 0 519 194 0 10 chr20 23053509 23053607 -49100275 - MER91B DNA MER1_type -12 178 82 21 36 0 0 chr20 23053699 23053727 -49100155 + AT_rich Low_complexity Low_complexity 1 28 0 257 317 115 50 chr20 23054131 23054749 -49099133 + L2 LINE L2 2247 2904 -410 764 187 13 39 chr20 23054844 23055024 -49098858 - FRAM SINE Alu 0 166 3 219 250 31 16 chr20 23055030 23055094 -49098788 + L2 LINE L2 2986 3050 -222 2374 93 0 19 chr20 23055714 23056027 -49097855 + AluSx SINE Alu 1 307 -5 224 188 31 0 chr20 23056308 23056372 -49097510 + (TA)n Simple_repeat Simple_repeat 2 67 0 180 341 79 8 chr20 23056799 23056925 -49096957 - MIR3 SINE MIR -29 179 45 182 170 57 57 chr20 23057814 23057867 -49096015 + MIR SINE MIR 139 191 -71 222 37 0 0 chr20 23058381 23058408 -49095474 + (TTCTCC)n Simple_repeat Simple_repeat 5 31 0 1941 84 45 52 chr20 23058410 23058697 -49095185 - AluSq SINE Alu -28 285 1 249 194 90 15 chr20 23059134 23059201 -49094681 - MIR SINE MIR -74 188 117 3672 203 47 13 chr20 23059248 23060040 -49093842 - MER21B LTR ERV1 -2 861 43 325 214 0 29 chr20 23060043 23060113 -49093769 - MER21B LTR ERV1 -777 86 19 306 0 0 0 chr20 23060176 23060210 -49093672 + (TC)n Simple_repeat Simple_repeat 1 34 0 1337 218 128 20 chr20 23060585 23060985 -49092897 - L1MA5 LINE L1 0 6300 5858 21 36 0 0 chr20 23061097 23061125 -49092757 + AT_rich Low_complexity Low_complexity 1 28 0 1469 103 0 0 chr20 23061250 23061444 -49092438 + AluSg SINE Alu 1 194 -116 2416 113 14 0 chr20 23061519 23061874 -49092008 + Tigger4(Zombi) DNA MER2_type 2372 2731 0 1365 78 6 6 chr20 23062078 23062258 -49091624 + U2 snRNA snRNA 1 180 -8 2232 120 0 0 chr20 23062613 23062912 -49090970 - AluSx SINE Alu -13 299 1 4687 168 50 16 chr20 23062913 23063818 -49090064 + L1MB5 LINE L1 5232 6165 -9 1864 224 10 24 chr20 23063851 23064267 -49089615 - MLT1F1 LTR MaLR -157 410 1 2808 207 39 67 chr20 23064269 23064354 -49089528 - L1M4 LINE L1 -2365 3781 3695 1740 160 0 66 chr20 23064354 23064672 -49089210 - AluSx SINE Alu -15 297 1 2808 207 39 67 chr20 23064672 23065262 -49088620 - L1M4 LINE L1 -2451 3695 3141 1899 100 0 0 chr20 23065262 23065503 -49088379 - AluSc SINE Alu -68 241 1 2808 207 39 67 chr20 23065503 23065845 -49088037 - L1M4 LINE L1 -3005 3141 2791 1784 48 26 0 chr20 23065912 23066140 -49087742 - L1PA14 LINE L1 0 6161 5928 311 223 255 0 chr20 23066140 23066234 -49087648 - MER5A DNA MER1_type -7 182 65 662 65 0 0 chr20 23066234 23066327 -49087555 - AluSp/q SINE Alu 0 313 221 2506 67 0 10 chr20 23066495 23066795 -49087087 + AluSp SINE Alu 1 297 -16 2209 110 3 0 chr20 23066891 23067191 -49086691 + AluSg SINE Alu 1 301 -9 1310 210 125 20 chr20 23067250 23067659 -49086223 + MER119 DNA MER1_type 131 582 -1 2346 83 0 20 chr20 23068102 23068402 -49085480 - AluSg SINE Alu -16 294 1 1848 123 95 42 chr20 23068746 23069105 -49084777 - L1MA6 LINE L1 0 6300 5923 2107 139 3 0 chr20 23069106 23069415 -49084467 + 7SLRNA srpRNA srpRNA 1 310 -10 45 55 0 0 chr20 23069415 23069488 -49084394 + AT_rich Low_complexity Low_complexity 1 73 0 225 205 0 0 chr20 23069497 23069536 -49084346 - L1MA6 LINE L1 -364 5936 5898 405 254 48 40 chr20 23069663 23069789 -49084093 + MER5A DNA MER1_type 63 189 0 221 296 51 20 chr20 23070189 23070287 -49083595 - MER91A DNA MER1_type -94 102 2 245 327 29 62 chr20 23070424 23070579 -49083303 + L2 LINE L2 2555 2703 -611 1241 32 6 13 chr20 23070579 23070757 -49083125 + L1PA5 LINE L1 6000 6154 0 245 327 29 62 chr20 23070757 23070809 -49083073 + L2 LINE L2 2703 2755 -559 2328 184 96 8 chr20 23070964 23071441 -49082441 - LTR53 LTR ERVL 0 519 1 2265 111 14 0 chr20 23071614 23071911 -49081971 - AluSx SINE Alu -10 302 2 2273 166 14 70 chr20 23071946 23072428 -49081454 - MER65C LTR ERV1 -6 455 1 1787 167 3 27 chr20 23072714 23073014 -49080868 + AluJo SINE Alu 1 293 -19 229 303 0 15 chr20 23073384 23073450 -49080432 - MIR SINE MIR -174 88 24 4640 153 26 16 chr20 23073597 23074393 -49079489 - L1MB3 LINE L1 0 6183 5380 589 244 52 36 chr20 23074401 23074594 -49079288 + Charlie8 DNA MER1_type 81 276 -2141 180 357 0 0 chr20 23075825 23075909 -49077973 - MIR SINE MIR -18 244 161 414 224 51 105 chr20 23076705 23076902 -49076980 - L1MC5 LINE L1 -86 7875 7669 2268 105 3 0 chr20 23076902 23077197 -49076685 - AluSc SINE Alu -13 296 1 414 224 51 105 chr20 23077197 23077244 -49076638 - L1MC5 LINE L1 -292 7669 7649 837 156 0 15 chr20 23077244 23077379 -49076503 - FLAM_C SINE Alu 0 133 1 414 224 51 105 chr20 23077379 23077446 -49076436 - L1MC5 LINE L1 -312 7649 7580 1187 132 0 0 chr20 23077527 23077701 -49076181 - L1PA14 LINE L1 -11 6150 5977 756 261 14 18 chr20 23078023 23078241 -49075641 + L1ME LINE L1 5546 5762 -400 * 5624 119 23 45 chr20 23078240 23078874 -49075008 + L1MC1 LINE L1 5398 6007 -326 13388 42 2 0 chr20 23078874 23081248 -49072634 - L1PA5 LINE L1 -6 6148 3771 5624 119 23 45 chr20 23081248 23081531 -49072351 + L1MC1 LINE L1 6007 6295 -38 1818 165 0 7 chr20 23081531 23081822 -49072060 + AluJo SINE Alu 15 303 -9 37 0 0 0 chr20 23082134 23082171 -49071711 + AT_rich Low_complexity Low_complexity 1 37 0 524 176 32 32 chr20 23082174 23082299 -49071583 - MIR SINE MIR -73 189 65 303 322 0 0 chr20 23082973 23083063 -49070819 - L1MC4 LINE L1 -1339 6703 6614 3793 174 115 3 chr20 23083065 23084285 -49069597 - L1P5 LINE L1 -361 5790 4379 180 0 0 0 chr20 23084285 23084305 -49069577 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 3793 174 115 3 chr20 23084305 23084430 -49069452 - L1P5 LINE L1 -1772 4379 4269 238 222 63 0 chr20 23084434 23084497 -49069385 - L1MDa LINE L1 -4529 2428 2362 1247 205 16 0 chr20 23084501 23084759 -49069123 - L1MDa LINE L1 -4752 2207 1946 23 0 0 0 chr20 23084759 23084782 -49069100 + AT_rich Low_complexity Low_complexity 1 23 0 587 94 0 0 chr20 23084790 23084875 -49069007 - L1MA3 LINE L1 -5 6300 6216 8504 154 46 14 chr20 23084875 23085606 -49068276 - L1M1 LINE L1 -4252 3313 2607 195 69 0 0 chr20 23085606 23085635 -49068247 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2090 126 0 3 chr20 23085635 23085916 -49067966 - AluSx SINE Alu -32 280 1 8504 154 46 14 chr20 23085916 23088330 -49065552 - L1M1 LINE L1 -4957 2608 16 1306 216 30 14 chr20 23088330 23088701 -49065181 - L1MDa LINE L1 -4997 1962 1586 1579 170 18 29 chr20 23088729 23089005 -49064877 - AluJo SINE Alu -6 306 34 927 196 0 12 chr20 23089012 23089185 -49064697 - FRAM SINE Alu -6 170 1 5327 214 88 31 chr20 23089185 23089715 -49064167 - L1MDa LINE L1 -5300 1559 1061 1188 144 44 48 chr20 23089715 23089859 -49064023 + MER30 DNA MER1_type 1 145 -85 2123 119 23 0 chr20 23089859 23090161 -49063721 + AluSg SINE Alu 1 309 -1 1188 144 44 48 chr20 23090161 23090245 -49063637 + MER30 DNA MER1_type 145 228 -2 5327 214 88 31 chr20 23090245 23091117 -49062765 - L1MDa LINE L1 -5798 1061 77 4442 133 29 4 chr20 23091122 23091811 -49062071 - MER50 LTR ERV1 -28 706 1 236 274 0 0 chr20 23091812 23091863 -49062019 - L1MDa LINE L1 -6798 61 11 833 255 67 118 chr20 23091968 23092553 -49061329 + MLT1H1 LTR MaLR 1 555 0 2283 108 0 0 chr20 23092713 23093008 -49060874 + AluSq SINE Alu 1 295 -18 549 199 78 14 chr20 23093072 23093213 -49060669 + L2 LINE L2 3161 3310 -3 874 315 58 6 chr20 23093459 23093805 -49060077 + LTR16C LTR ERVL 126 489 -2 507 270 28 22 chr20 23093822 23094000 -49059882 - MIR SINE MIR -82 180 2 635 275 46 23 chr20 23094093 23094311 -49059571 - Charlie8 DNA MER1_type -2135 282 60 395 147 73 0 chr20 23094311 23094379 -49059503 + L1ME2 LINE L1 6004 6076 -88 1815 189 0 3 chr20 23094420 23094721 -49059161 + AluJb SINE Alu 1 300 -12 2073 101 25 0 chr20 23094805 23095083 -49058799 - AluSx SINE Alu -11 301 17 450 297 88 33 chr20 23095397 23095670 -49058212 + L1ME4a LINE L1 5830 6117 -4 7132 197 75 55 chr20 23095702 23097581 -49056301 + L1MDa LINE L1 27 1866 -4674 2554 71 7 0 chr20 23097581 23097891 -49055991 + AluSp SINE Alu 1 312 -1 7132 197 75 55 chr20 23097891 23098192 -49055690 + L1MDa LINE L1 1866 2159 -4381 897 129 0 23 chr20 23098192 23098324 -49055558 + FLAM_C SINE Alu 1 129 -4 7132 197 75 55 chr20 23098324 23098621 -49055261 + L1MDa LINE L1 2159 2640 -3900 2196 108 3 3 chr20 23098621 23098916 -49054966 - AluSg SINE Alu -15 295 1 770 240 50 6 chr20 23098928 23099224 -49054658 + L1MDa LINE L1 3494 4733 -1807 965 156 0 0 chr20 23099224 23099363 -49054519 + MER2 DNA MER2_type 1 139 -206 3053 111 12 2 chr20 23099363 23099777 -49054105 + MER1A DNA MER1_type 1 418 -111 1063 144 27 5 chr20 23099778 23099966 -49053916 + L1MD1 LINE L1 6051 6242 0 2608 54 0 0 chr20 23100789 23101086 -49052796 - AluY SINE Alu -14 297 1 1172 159 15 10 chr20 23102597 23102798 -49051084 + MER2 DNA MER2_type 1 202 -143 2286 116 0 0 chr20 23102798 23103100 -49050782 - AluSx SINE Alu -10 302 1 27 29 0 0 chr20 23103107 23103141 -49050741 + AT_rich Low_complexity Low_complexity 1 34 0 378 234 0 0 chr20 23103147 23103211 -49050671 + MER2 DNA MER2_type 282 345 0 2124 144 0 0 chr20 23103908 23104200 -49049682 - AluSx SINE Alu -20 292 1 235 106 85 0 chr20 23104367 23104414 -49049468 + LTR49 LTR ERV1 471 521 -74 21 0 0 0 chr20 23104427 23104448 -49049434 + AT_rich Low_complexity Low_complexity 1 21 0 1310 152 5 19 chr20 23104793 23105004 -49048878 - AluJo SINE Alu -18 294 87 1790 163 14 7 chr20 23105175 23105464 -49048418 + AluSx SINE Alu 1 291 -21 348 169 37 7 chr20 23105495 23105631 -49048251 + (TA)n Simple_repeat Simple_repeat 1 140 0 1667 126 28 0 chr20 23105635 23105882 -49048000 - AluSx SINE Alu -7 305 52 2028 165 24 0 chr20 23106106 23106440 -49047442 - MER2 DNA MER2_type -2 342 1 1143 167 33 0 chr20 23107140 23107355 -49046527 + L1MB2 LINE L1 5948 6169 -2 2429 57 3 29 chr20 23107381 23107696 -49046186 + AluSp SINE Alu 1 307 -6 230 308 0 13 chr20 23108155 23108233 -49045649 + L3 LINE CR1 1392 1468 -109 767 264 49 8 chr20 23108237 23108483 -49045399 - MIR SINE MIR 0 262 7 234 0 0 0 chr20 23108702 23108728 -49045154 + (A)n Simple_repeat Simple_repeat 1 26 0 242 264 0 0 chr20 23109874 23109927 -49043955 - MER5A DNA MER1_type -98 91 39 230 322 103 11 chr20 23110184 23110445 -49043437 + L2 LINE L2 1898 2182 -1132 248 263 76 42 chr20 23111335 23111453 -49042429 + MER103 DNA DNA 2 123 -43 1258 237 251 16 chr20 23111461 23111971 -49041911 + LTR41 LTR ERVL 1 630 -143 1553 187 7 14 chr20 23112693 23112977 -49040905 + AluJb SINE Alu 1 282 -30 11035 108 38 18 chr20 23113726 23114769 -49039113 + Tigger1 DNA MER2_type 40 1130 -1288 1823 185 0 0 chr20 23114769 23115056 -49038826 - AluJb SINE Alu -23 289 3 11035 108 38 18 chr20 23115056 23115687 -49038195 + Tigger1 DNA MER2_type 1130 1747 -671 2278 101 3 0 chr20 23115688 23115986 -49037896 + AluSx SINE Alu 1 299 -13 741 103 75 0 chr20 23115996 23116103 -49037779 + AluJo/FLAM SINE Alu 2 116 -196 2503 69 0 16 chr20 23116103 23116408 -49037474 - AluY SINE Alu -11 300 1 2135 107 3 30 chr20 23116408 23116708 -49037174 - AluSg SINE Alu -18 292 1 3127 120 16 32 chr20 23116732 23117079 -49036803 + Tigger1 DNA MER2_type 1735 2086 -332 2503 62 0 13 chr20 23117079 23117386 -49036496 + AluY SINE Alu 1 303 -8 1664 173 19 26 chr20 23117396 23117703 -49036179 + AluSx SINE Alu 5 309 -3 3127 120 16 32 chr20 23117703 23117840 -49036042 + Tigger1 DNA MER2_type 2095 2222 -196 2343 123 42 78 chr20 23117840 23117863 -49036019 + Tigger2a DNA MER2_type 2 24 -2684 188 35 35 0 chr20 23117863 23117892 -49035990 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5820 30 8 0 chr20 23117892 23118563 -49035319 - L1PA3 LINE L1 -10 6145 5470 2343 123 42 78 chr20 23118563 23118925 -49034957 + Tigger2a DNA MER2_type 23 372 -2336 2556 64 0 0 chr20 23118925 23119221 -49034661 - AluY SINE Alu -15 296 1 2343 123 42 78 chr20 23119221 23119282 -49034600 + Tigger2a DNA MER2_type 372 434 0 1084 149 26 10 chr20 23119282 23119476 -49034406 + Tigger1 DNA MER2_type 2220 2416 -2 248 206 37 84 chr20 23119482 23119589 -49034293 + L1MC4 LINE L1 7940 8041 -1 906 190 0 0 chr20 23120239 23120402 -49033480 - FRAM SINE Alu -2 164 2 382 288 63 35 chr20 23120868 23121153 -49032729 + L1MC4 LINE L1 7138 7430 -612 457 213 115 66 chr20 23121286 23121530 -49032352 + L1MC4 LINE L1 7689 7944 -98 527 261 35 0 chr20 23122008 23122150 -49031732 - MIR SINE MIR -23 239 93 324 234 89 32 chr20 23122580 23122704 -49031178 + MIR3 SINE MIR 9 139 -69 1689 149 4 29 chr20 23123589 23123864 -49030018 - AluJo SINE Alu -44 268 1 2158 104 17 0 chr20 23123960 23124257 -49029625 - AluSp SINE Alu -11 302 1 727 172 31 8 chr20 23124689 23124817 -49029065 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr20 23125074 23125095 -49028787 + AT_rich Low_complexity Low_complexity 1 21 0 1931 108 61 0 chr20 23125097 23125421 -49028461 + AluSx SINE Alu 1 341 0 656 236 239 18 chr20 23125869 23126195 -49027687 + MLT1J LTR MaLR 107 504 -7 1267 284 68 24 chr20 23126206 23126752 -49027130 - L3 LINE CR1 -77 1500 931 278 140 123 0 chr20 23127039 23127096 -49026786 + MER5A DNA MER1_type 26 89 -100 246 208 293 19 chr20 23127107 23127178 -49026704 - MER5A DNA MER1_type -3 186 87 659 266 23 18 chr20 23127178 23127372 -49026510 + MER5B DNA MER1_type 2 178 0 469 275 150 18 chr20 23127377 23127544 -49026338 - MER5A DNA MER1_type 0 189 1 188 307 68 74 chr20 23127705 23127881 -49026001 - L3 LINE CR1 -1125 452 278 1855 125 56 14 chr20 23128237 23128387 -49025495 - AluSx SINE Alu -13 299 157 2162 122 6 3 chr20 23128387 23128698 -49025184 - AluSx SINE Alu 0 312 1 1855 125 56 14 chr20 23128698 23128834 -49025048 - AluSx SINE Alu -155 157 1 271 194 58 19 chr20 23130467 23130570 -49023312 - Charlie7 DNA MER1_type -2466 146 40 567 153 113 87 chr20 23130775 23130925 -49022957 + FRAM SINE Alu 1 154 -12 384 279 158 42 chr20 23131410 23131629 -49022253 - L2 LINE L2 -16 3297 3105 1697 160 3 40 chr20 23131629 23131929 -49021953 + AluJo SINE Alu 14 302 -10 2316 111 3 0 chr20 23131932 23132238 -49021644 + AluSg SINE Alu 1 307 -3 384 279 158 42 chr20 23132238 23132545 -49021337 - L2 LINE L2 -209 3104 2709 2395 77 0 32 chr20 23132545 23132856 -49021026 - AluY SINE Alu -10 301 1 384 279 158 42 chr20 23132856 23132873 -49021009 - L2 LINE L2 -604 2709 2695 661 106 17 14 chr20 23132873 23132980 -49020902 + LTR7 LTR ERV1 252 443 -7 13747 144 20 36 chr20 23132987 23135709 -49018173 + HERVH LTR ERV1 1 2992 -4721 7076 120 7 10 chr20 23135695 23137645 -49016237 + HERVH LTR ERV1 3140 5286 -1805 * 2679 127 9 12 chr20 23137648 23138080 -49015802 + HERVH LTR ERV1 7283 7713 0 1421 150 129 78 chr20 23138080 23138506 -49015376 + LTR7 LTR ERV1 1 448 -2 287 157 48 36 chr20 23138510 23138593 -49015289 + L1M3 LINE L1 2785 2868 -3278 740 247 44 54 chr20 23138610 23138779 -49015103 + L1M3 LINE L1 4517 4683 -1463 2559 70 0 6 chr20 23138779 23139092 -49014790 + AluY SINE Alu 1 311 0 740 247 44 54 chr20 23139092 23139238 -49014644 + L1M3 LINE L1 4683 4829 -1317 340 278 1 1 chr20 23139248 23139365 -49014517 + L1M3 LINE L1 5664 5780 -398 907 265 86 3 chr20 23139379 23139681 -49014201 - L2 LINE L2 -613 2701 2375 1665 158 0 8 chr20 23140061 23140321 -49013561 + AluJb SINE Alu 43 300 -12 689 152 0 0 chr20 23140501 23140600 -49013282 - AluJ/FLAM SINE Alu -212 100 2 439 279 0 7 chr20 23140740 23140876 -49013006 - L1ME4a LINE L1 -17 6104 5970 305 297 20 0 chr20 23140877 23140978 -49012904 - L1ME4a LINE L1 -194 5927 5825 1143 199 7 48 chr20 23141550 23141822 -49012060 - MIR SINE MIR 0 262 2 561 206 15 15 chr20 23142126 23142262 -49011620 - L1MB8 LINE L1 0 6178 6043 2252 95 14 14 chr20 23142274 23142433 -49011449 - AluSc SINE Alu -15 294 133 2357 92 0 0 chr20 23142433 23142728 -49011154 - AluSc SINE Alu -14 295 1 2252 95 14 14 chr20 23142728 23142862 -49011020 - AluSc SINE Alu -175 134 1 22 88 0 0 chr20 23143285 23143342 -49010540 + AT_rich Low_complexity Low_complexity 1 57 0 32 0 0 0 chr20 23143442 23143474 -49010408 + AT_rich Low_complexity Low_complexity 1 32 0 1886 84 0 4 chr20 23144912 23145149 -49008733 - AluSx SINE Alu -76 236 1 2080 129 11 0 chr20 23145746 23146033 -49007849 + AluSg SINE Alu 1 290 -20 2400 85 0 3 chr20 23146611 23146918 -49006964 + AluSx SINE Alu 1 306 -6 272 273 202 0 chr20 23147320 23147419 -49006463 + MIR SINE MIR 35 153 -55 1622 148 93 0 chr20 23148448 23148739 -49005143 - L1PA16 LINE L1 -22 6144 5827 1388 195 47 112 chr20 23149303 23149597 -49004285 - LTR26E LTR ERV1 -3 619 297 816 145 8 0 chr20 23149597 23149721 -49004161 - FLAM_C SINE Alu -4 129 5 1388 195 47 112 chr20 23149721 23150000 -49003882 - LTR26E LTR ERV1 -325 297 1 497 146 56 97 chr20 23151314 23151458 -49002424 - LTR37A LTR ERV1 0 426 289 252 116 7 275 chr20 23151477 23151615 -49002267 - LTR37A LTR ERV1 -241 185 85 2368 86 0 0 chr20 23151651 23151942 -49001940 - AluSc SINE Alu -18 291 1 2200 106 20 0 chr20 23152075 23152378 -49001504 - AluSx SINE Alu -3 309 1 2236 179 141 2 chr20 23152480 23152898 -49000984 - MER70B LTR ERVL -102 476 1 317 338 99 31 chr20 23152920 23153334 -49000548 + L2 LINE L2 2328 2769 -545 2349 66 0 33 chr20 23154077 23154379 -48999503 + AluY SINE Alu 1 292 -19 1696 171 22 0 chr20 23154731 23155005 -48998877 - AluJo SINE Alu -8 304 25 612 174 136 0 chr20 23155015 23155147 -48998735 - L1MA10 LINE L1 -3 6331 6182 2093 127 115 0 chr20 23155156 23155494 -48998388 - MER51B LTR ERV1 0 377 1 3319 124 148 151 chr20 23155498 23155775 -48998107 - MER51B-int LTR ERV1 -2 7814 7538 2623 24 7 3 chr20 23155775 23156073 -48997809 + AluY SINE Alu 1 299 -12 3319 124 148 151 chr20 23156073 23156705 -48997177 - MER51B-int LTR ERV1 -278 7538 6907 2379 112 0 0 chr20 23156709 23157021 -48996861 - AluSx SINE Alu 0 312 1 4424 147 20 11 chr20 23157022 23157986 -48995896 - MER51B-int LTR ERV1 -997 6736 5759 5746 13 0 21 chr20 23159973 23160008 -48993874 - SVA Other Other 0 1386 1352 378 0 0 0 chr20 23160008 23160050 -48993832 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 5746 13 0 21 chr20 23160050 23160638 -48993244 - SVA Other Other -34 1352 776 2158 122 3 10 chr20 23160932 23161235 -48992647 - AluSx SINE Alu -11 301 1 216 97 0 0 chr20 23161331 23161362 -48992520 + (A)n Simple_repeat Simple_repeat 1 31 0 1051 241 148 14 chr20 23161872 23162338 -48991544 + L2 LINE L2 2690 3281 -32 1728 246 114 9 chr20 23162889 23163470 -48990412 + L1MC4 LINE L1 7202 7843 -199 2424 97 0 0 chr20 23163509 23163817 -48990065 - AluSx SINE Alu -4 308 1 366 44 0 0 chr20 23164168 23164213 -48989669 + MADE1 DNA Mariner 36 80 0 346 292 69 15 chr20 23164221 23164351 -48989531 - L2 LINE L2 -25 3288 3152 479 261 39 72 chr20 23164398 23164578 -48989304 + MER5A DNA MER1_type 1 174 -15 430 250 50 89 chr20 23164417 23164597 -48989285 - MER5A DNA MER1_type -5 184 12 * 2392 103 3 0 chr20 23164653 23164955 -48988927 + AluSx SINE Alu 1 303 -9 204 256 0 0 chr20 23166135 23166174 -48987708 - MIR SINE MIR -140 68 30 321 78 39 0 chr20 23166544 23166595 -48987287 - Charlie8 DNA MER1_type -2222 195 143 251 175 18 0 chr20 23166645 23166702 -48987180 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 1830 143 10 10 chr20 23167066 23167359 -48986523 + AluJo SINE Alu 1 293 -19 1973 129 7 3 chr20 23167676 23167962 -48985920 - AluSx SINE Alu -25 287 1 745 176 37 0 chr20 23168416 23168552 -48985330 - MER3 DNA MER1_type -68 141 1 987 80 0 0 chr20 23169392 23169543 -48984339 + (TA)n Simple_repeat Simple_repeat 1 151 0 2304 98 7 0 chr20 23169696 23169993 -48983889 - AluSc SINE Alu -9 300 2 2054 148 24 9 chr20 23170945 23171300 -48982582 - MLT1A1 LTR MaLR -4 501 1 26 64 0 0 chr20 23172152 23172199 -48981683 + AT_rich Low_complexity Low_complexity 1 47 0 1991 84 73 0 chr20 23172286 23172547 -48981335 + AluSg SINE Alu 1 280 -30 328 248 148 0 chr20 23172904 23173005 -48980877 + L2 LINE L2 3197 3312 -1 395 315 135 0 chr20 23173046 23173224 -48980658 + MIR SINE MIR 48 249 -13 2141 117 17 3 chr20 23173348 23173648 -48980234 + AluSx SINE Alu 1 304 -8 2300 95 10 0 chr20 23174094 23174389 -48979493 + AluSq SINE Alu 2 299 -14 423 273 27 0 chr20 23174618 23174728 -48979154 - MIR3 SINE MIR -7 201 89 648 162 0 0 chr20 23174803 23174902 -48978980 + FLAM_C SINE Alu 34 132 -11 1665 151 39 0 chr20 23175659 23175943 -48977939 - L1MC3 LINE L1 -19 7766 7472 2000 191 97 39 chr20 23175947 23176121 -48977761 - L1MC3 LINE L1 -763 7022 6860 2154 104 0 7 chr20 23176121 23176418 -48977464 - AluSc SINE Alu -14 295 1 2000 191 97 39 chr20 23176418 23176464 -48977418 - L1MC3 LINE L1 -925 6860 6818 2337 88 3 13 chr20 23176464 23176771 -48977111 - AluSq SINE Alu -9 304 1 2000 191 97 39 chr20 23176771 23177084 -48976798 - L1MC3 LINE L1 -967 6818 6457 2101 142 7 0 chr20 23177118 23177421 -48976461 + AluJb SINE Alu 1 305 -7 277 264 100 45 chr20 23177444 23177554 -48976328 + MER77 LTR ERV1 82 197 -408 * 850 226 41 98 chr20 23177527 23177772 -48976110 + MER21B LTR ERV1 98 336 -269 3775 150 64 51 chr20 23177790 23178535 -48975347 - L1MC3 LINE L1 -743 5403 5291 2074 103 7 0 chr20 23178535 23178808 -48975074 - AluSq SINE Alu -7 306 32 3775 150 64 51 chr20 23178808 23179114 -48974768 - L1MC3 LINE L1 -855 5291 4990 1753 181 58 65 chr20 23179120 23179567 -48974315 + L1MB7 LINE L1 5734 6177 -7 483 234 72 9 chr20 23180031 23180142 -48973740 + L2 LINE L2 3190 3307 -6 2283 102 0 10 chr20 23180810 23181114 -48972768 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr20 23181543 23181576 -48972306 + AT_rich Low_complexity Low_complexity 1 33 0 375 231 81 43 chr20 23181760 23181899 -48971983 - MIR SINE MIR -56 152 45 368 281 45 54 chr20 23182372 23182596 -48971286 + L1MC4a LINE L1 5813 6034 -1774 40 59 0 0 chr20 23183015 23183083 -48970799 + AT_rich Low_complexity Low_complexity 1 68 0 1576 153 160 0 chr20 23183148 23183416 -48970466 + AluSx SINE Alu 1 311 -1 1890 145 3 0 chr20 23183642 23183931 -48969951 - AluSx SINE Alu -22 290 1 297 294 132 84 chr20 23184065 23184745 -48969137 - L2 LINE L2 -2 3270 2558 951 211 32 16 chr20 23185109 23185299 -48968583 + MER58A DNA MER1_type 32 224 0 2275 181 84 16 chr20 23186015 23186502 -48967380 - MLT2B1 LTR ERVL 0 520 1 2457 53 3 3 chr20 23187257 23187560 -48966322 + AluSc SINE Alu 1 303 -6 189 0 0 0 chr20 23190250 23190271 -48963611 + (GA)n Simple_repeat Simple_repeat 2 22 0 2309 108 3 0 chr20 23190657 23190964 -48962918 + AluSx SINE Alu 1 308 -4 631 264 86 15 chr20 23191034 23191231 -48962651 + MIR SINE MIR 26 236 -26 2128 96 61 0 chr20 23191276 23191569 -48962313 + AluSx SINE Alu 1 311 -1 204 125 0 0 chr20 23191633 23191665 -48962217 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 291 225 0 0 chr20 23192032 23192112 -48961770 + L1MC4a LINE L1 5265 5344 -802 3669 120 45 0 chr20 23192122 23192671 -48961211 - L1PA16 LINE L1 0 6166 5593 1295 131 0 15 chr20 23192671 23192859 -48961023 - AluSg/x SINE Alu -8 304 118 441 103 0 0 chr20 23192859 23192917 -48960965 - Alu SINE Alu -253 59 2 1681 107 41 0 chr20 23192929 23193173 -48960709 - L1PA16 LINE L1 -568 5598 5345 467 204 43 143 chr20 23193282 23193512 -48960370 + L2 LINE L2 3103 3309 -4 1070 246 40 113 chr20 23193521 23193732 -48960150 + L1MC4a LINE L1 5398 5623 -2185 2333 107 0 0 chr20 23193732 23194031 -48959851 + AluSq SINE Alu 1 299 -14 1070 246 40 113 chr20 23194031 23194421 -48959461 + L1MC4a LINE L1 5623 5955 -1853 678 254 123 4 chr20 23194588 23194816 -48959066 + MIR SINE MIR 8 262 0 2408 56 0 0 chr20 23194889 23195173 -48958709 - AluY SINE Alu -16 295 12 250 219 123 27 chr20 23195641 23195714 -48958168 - L1ME3 LINE L1 -3 6159 6080 192 40 0 0 chr20 23196047 23196072 -48957810 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1008 268 145 40 chr20 23197724 23198123 -48955759 + MLT1J LTR MaLR 1 456 -55 1984 129 0 7 chr20 23198123 23198439 -48955443 - AluSx SINE Alu 0 314 1 1008 268 145 40 chr20 23198439 23198493 -48955389 + MLT1J LTR MaLR 456 503 -8 3051 185 58 25 chr20 23198552 23199222 -48954660 + L1ME1 LINE L1 5470 6161 -5 567 237 109 130 chr20 23199536 23200097 -48953785 + MLT1F LTR MaLR 1 549 -6 2758 153 90 30 chr20 23202052 23202654 -48951228 - LTR65 LTR ERV1 -1 668 31 531 246 56 39 chr20 23203112 23203291 -48950591 - L2 LINE L2 -34 3279 3098 485 150 12 0 chr20 23203292 23203372 -48950510 + MER5A DNA MER1_type 1 81 -108 1635 251 207 33 chr20 23203382 23203429 -48950453 - L2 LINE L2 -464 2850 2813 668 223 63 69 chr20 23203429 23203604 -48950278 - MER5B DNA MER1_type -2 176 3 1635 251 207 33 chr20 23203604 23204381 -48949501 - L2 LINE L2 -501 2813 1882 2277 120 0 0 chr20 23204388 23204696 -48949186 + AluSg SINE Alu 1 308 -2 521 290 26 31 chr20 23205009 23205202 -48948680 - Charlie8 DNA MER1_type -2225 192 1 835 196 0 0 chr20 23205220 23205363 -48948519 - FLAM_C SINE Alu 0 143 1 2197 92 7 0 chr20 23205503 23205835 -48948047 - AluSp SINE Alu 0 334 1 1677 96 9 17 chr20 23205846 23206076 -48947806 - AluSg/x SINE Alu 0 312 85 1114 182 54 0 chr20 23206261 23206464 -48947418 - L1PB4 LINE L1 -1 6155 5942 2434 80 0 3 chr20 23206745 23207045 -48946837 - AluSc SINE Alu -10 299 1 1205 199 53 136 chr20 23207081 23207131 -48946751 - L1ME2 LINE L1 -13 6545 6492 198 0 0 0 chr20 23207131 23207153 -48946729 + (TATG)n Simple_repeat Simple_repeat 3 24 0 1205 199 53 136 chr20 23207153 23207985 -48945897 - L1ME2 LINE L1 -66 6492 5716 2146 70 0 22 chr20 23208006 23208278 -48945604 + AluSx SINE Alu 3 268 -44 1156 124 0 30 chr20 23208278 23208438 -48945444 - AluSx SINE Alu -155 157 1 1728 225 34 64 chr20 23208441 23209036 -48944846 - L1ME2 LINE L1 -2154 4386 3810 847 236 24 20 chr20 23209036 23209286 -48944596 - L1ME2 LINE L1 -3057 3483 3233 308 131 0 16 chr20 23209308 23209369 -48944513 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 967 172 31 0 chr20 23209375 23209538 -48944344 - AluJ SINE Alu -13 299 132 1883 146 0 27 chr20 23209567 23209868 -48944014 + AluSx SINE Alu 1 293 -19 748 172 0 31 chr20 23209884 23210012 -48943870 - AluJ SINE Alu -187 125 2 1757 227 52 48 chr20 23210055 23210525 -48943357 - L1ME2 LINE L1 -3417 3123 2647 2242 73 0 24 chr20 23210525 23210843 -48943039 + AluY SINE Alu 1 311 0 1757 227 52 48 chr20 23210843 23210947 -48942935 - L1ME2 LINE L1 -3893 2647 2545 1087 229 46 26 chr20 23210947 23211249 -48942633 - L1ME2 LINE L1 -5800 921 614 239 243 33 105 chr20 23212247 23212399 -48941483 + L2 LINE L2 3169 3309 -4 260 265 116 48 chr20 23213117 23213264 -48940618 + HERVL LTR ERVL 985 1141 -4623 812 196 17 113 chr20 23213953 23214254 -48939628 + LTR41 LTR ERVL 502 773 0 360 250 71 56 chr20 23214644 23214840 -48939042 + HERVL LTR ERVL 408 618 -4879 1051 302 63 77 chr20 23214908 23215377 -48938505 + HERVL LTR ERVL 775 1230 -4534 2103 172 39 21 chr20 23215377 23215760 -48938122 - MLT1B LTR MaLR 0 390 1 1051 302 63 77 chr20 23215760 23216084 -48937798 + HERVL LTR ERVL 1230 1557 -4207 1224 328 28 2 chr20 23216117 23216553 -48937329 + HERVL LTR ERVL 1647 2093 -3671 2075 240 69 56 chr20 23216554 23216613 -48937269 - L1MEc LINE L1 -3638 3319 3262 2127 191 17 6 chr20 23216613 23216974 -48936908 + MLT1A1 LTR MaLR 1 365 0 2075 240 69 56 chr20 23216974 23217388 -48936494 - L1MEc LINE L1 -3695 3262 2855 2592 62 0 3 chr20 23217388 23217695 -48936187 - AluY SINE Alu -5 306 1 2075 240 69 56 chr20 23217695 23217839 -48936043 - L1MEc LINE L1 -4102 2855 2714 804 66 9 0 chr20 23217839 23217945 -48935937 - L1MA2 LINE L1 0 6304 6198 2075 240 69 56 chr20 23217945 23218019 -48935863 - L1MEc LINE L1 -4243 2714 2642 2278 120 0 13 chr20 23218019 23218335 -48935547 - AluSx SINE Alu 0 312 1 2075 240 69 56 chr20 23218335 23219157 -48934725 - L1MEc LINE L1 -4315 2642 1823 1339 33 0 0 chr20 23219170 23219322 -48934560 - AluY SINE Alu -12 299 148 1158 221 85 42 chr20 23219322 23219769 -48934113 - L1MEc LINE L1 -5179 1680 1215 25 0 0 0 chr20 23219773 23219798 -48934084 + AT_rich Low_complexity Low_complexity 1 25 0 308 151 0 0 chr20 23219799 23219852 -48934030 - MER41B LTR ERV1 -101 534 482 3976 50 2 2 chr20 23219856 23220320 -48933562 - L1PA8 LINE L1 0 6172 5709 2382 102 0 0 chr20 23221064 23221369 -48932513 - AluSq SINE Alu -8 305 1 23 68 0 0 chr20 23221501 23221545 -48932337 + AT_rich Low_complexity Low_complexity 1 44 0 747 95 9 0 chr20 23221546 23221651 -48932231 - L1MA5A LINE L1 -5 6292 6187 573 136 23 0 chr20 23221702 23221790 -48932092 - 5S rRNA rRNA -31 90 1 2225 113 3 0 chr20 23222075 23222368 -48931514 - AluSx SINE Alu -15 297 4 473 221 29 37 chr20 23223210 23223346 -48930536 + MLT1J LTR MaLR 377 511 0 23 0 0 0 chr20 23224491 23224514 -48929368 + AT_rich Low_complexity Low_complexity 1 23 0 2162 121 3 6 chr20 23224786 23225099 -48928783 - AluJb SINE Alu 0 312 1 283 167 19 0 chr20 23225755 23225809 -48928073 - MER112 DNA MER1_type -185 75 21 1090 257 53 48 chr20 23225851 23226000 -48927882 - MER110 LTR ERV1 -14 477 330 1166 166 10 10 chr20 23226000 23226205 -48927677 + L1MC1 LINE L1 6121 6325 -8 1090 257 53 48 chr20 23226205 23226468 -48927414 - MER110 LTR ERV1 -161 330 63 2284 101 0 0 chr20 23227145 23227441 -48926441 + AluSg SINE Alu 1 296 -14 2473 67 0 3 chr20 23227463 23227763 -48926119 - AluY SINE Alu -12 299 1 288 0 0 0 chr20 23227993 23228025 -48925857 + (CA)n Simple_repeat Simple_repeat 2 33 0 832 199 0 0 chr20 23228145 23228286 -48925596 + FLAM_C SINE Alu 2 142 -1 2172 109 93 13 chr20 23229261 23229573 -48924309 - MER1B DNA MER1_type 0 337 1 2043 166 84 49 chr20 23229595 23230046 -48923836 - MLT1C LTR MaLR 0 467 1 2363 82 0 0 chr20 23230066 23230357 -48923525 - AluSg SINE Alu -15 295 5 2083 209 75 82 chr20 23230439 23231133 -48922749 - L1ME1 LINE L1 -5 6095 5407 2324 101 0 16 chr20 23231147 23231464 -48922418 - AluSx SINE Alu 0 312 1 2197 208 109 29 chr20 23231484 23232248 -48921634 - L1ME1 LINE L1 -2790 3290 2466 1830 116 30 51 chr20 23232241 23232317 -48921565 + L1 LINE L1 4428 4504 -1642 * 1188 207 161 23 chr20 23232317 23232621 -48921261 - MER7A DNA MER2_type -1 345 2 1830 116 30 51 chr20 23232621 23232879 -48921003 + L1 LINE L1 4504 4755 -1391 1678 134 19 1 chr20 23232879 23233188 -48920694 - MER46B DNA MER2_type 0 236 4 3360 123 43 5 chr20 23233189 23233749 -48920133 + L1 LINE L1 4752 5332 -814 2234 261 81 58 chr20 23235739 23236353 -48917529 - L1ME1 LINE L1 -4440 1640 1042 2355 95 0 0 chr20 23236353 23236647 -48917235 - AluSx SINE Alu -13 299 6 2234 261 81 58 chr20 23236647 23237535 -48916347 - L1ME1 LINE L1 -5038 1042 83 2277 106 0 0 chr20 23237535 23237828 -48916054 - AluSx SINE Alu -19 293 1 2234 261 81 58 chr20 23237828 23237913 -48915969 - L1ME1 LINE L1 -5997 83 1 246 136 0 0 chr20 23238571 23238615 -48915267 + (T)n Simple_repeat Simple_repeat 1 44 0 247 281 94 62 chr20 23239132 23239260 -48914622 - L2 LINE L2 0 3272 3141 255 329 36 7 chr20 23239444 23239581 -48914301 + MIR SINE MIR 103 243 -19 230 0 33 0 chr20 23240043 23240073 -48913809 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 558 255 56 35 chr20 23240816 23241047 -48912835 - L1MC4a LINE L1 -1980 5828 5593 2245 114 0 0 chr20 23241842 23242132 -48911750 - AluSg SINE Alu -20 290 1 499 222 23 171 chr20 23242176 23242392 -48911490 - MER91B DNA MER1_type -5 185 2 306 121 45 0 chr20 23243303 23243369 -48910513 - L1MB3 LINE L1 0 6183 6115 718 176 145 63 chr20 23243372 23243531 -48910351 + AluJo SINE Alu 2 173 -139 1211 170 29 125 chr20 23243534 23243910 -48909972 + MLT1A1 LTR MaLR 26 365 0 2487 234 81 7 chr20 23243910 23244648 -48909234 - L1MEc LINE L1 -2390 4150 3358 1594 203 3 16 chr20 23244660 23244966 -48908916 - AluJb SINE Alu -9 303 2 809 250 59 45 chr20 23244970 23245458 -48908424 - L1MEc LINE L1 -3931 2641 2168 1917 91 136 0 chr20 23245579 23245844 -48908038 - AluY SINE Alu 0 301 1 186 43 0 0 chr20 23246025 23246048 -48907834 + (TGG)n Simple_repeat Simple_repeat 1 23 0 288 0 0 0 chr20 23246048 23246080 -48907802 + (TG)n Simple_repeat Simple_repeat 2 33 0 257 269 30 0 chr20 23246100 23246167 -48907715 - L1MEc LINE L1 -4513 2027 1959 877 217 13 94 chr20 23346761 23347060 -48806822 - L1MC4 LINE L1 0 8042 7768 2001 101 26 13 chr20 23347082 23347658 -48806224 + MER61-int LTR ERV1 1923 2635 -2582 1733 97 120 0 chr20 23347658 23347917 -48805965 + MER51B LTR ERV1 88 377 0 1149 224 104 84 chr20 23348089 23348540 -48805342 - MLT1H LTR MaLR -39 510 51 227 330 0 21 chr20 23348657 23348754 -48805128 - LTR67 LTR ERVL -2 555 461 281 118 196 0 chr20 23350869 23350920 -48802962 + LTR67 LTR ERVL 497 557 0 241 116 70 0 chr20 23350949 23350992 -48802890 + MER63 DNA MER1_type 14 685 -377 340 239 22 22 chr20 23350992 23351084 -48802798 - L1MC/D LINE L1 -605 5559 5468 375 213 0 64 chr20 23352512 23352579 -48801303 - MLT1H LTR MaLR 0 549 479 3198 153 49 21 chr20 23352579 23353189 -48800693 - L1MC1 LINE L1 0 6333 5707 2232 121 36 36 chr20 23353189 23353553 -48800329 - THE1B LTR MaLR 0 364 1 11317 87 34 14 chr20 23353553 23355103 -48798779 - THE1B-int LTR MaLR 0 1580 1 2050 134 6 34 chr20 23355103 23355431 -48798451 - THE1B LTR MaLR 0 364 46 232 167 0 37 chr20 23355437 23355491 -48798391 + L1PB4 LINE L1 6093 6144 -12 296 109 0 0 chr20 23355493 23355539 -48798343 - THE1B LTR MaLR -382 46 1 1670 161 14 21 chr20 23355539 23355830 -48798052 - L1MC1 LINE L1 -622 5711 5423 575 260 89 65 chr20 23355922 23356168 -48797714 - MLT1H LTR MaLR -222 327 76 757 194 0 0 chr20 23356282 23356416 -48797466 + L1PB4 LINE L1 6021 6154 -2 435 285 29 0 chr20 23357162 23357299 -48796583 - L1ME3A LINE L1 -3 6167 6027 888 200 43 143 chr20 23357302 23357762 -48796120 - L1ME3A LINE L1 -263 5907 5494 396 0 0 0 chr20 23357805 23357849 -48796033 + (GA)n Simple_repeat Simple_repeat 1 44 0 22 35 0 0 chr20 23357886 23357915 -48795967 + AT_rich Low_complexity Low_complexity 1 29 0 254 203 0 181 chr20 23359262 23359400 -48794482 + MLT1H LTR MaLR 421 533 -16 2396 70 0 35 chr20 23359655 23359969 -48793913 - AluY SINE Alu -8 303 1 869 192 32 41 chr20 23360276 23360506 -48793376 - L1ME2 LINE L1 -126 6038 5800 618 242 37 91 chr20 23361133 23361631 -48792251 + MLT2F LTR ERVL 5 663 0 706 288 79 62 chr20 23362153 23362766 -48791116 - MER49 LTR ERV1 -81 842 21 258 170 64 0 chr20 23362772 23362819 -48791063 - MER81 DNA DNA -29 85 36 298 195 49 80 chr20 23362840 23362963 -48790919 + MLT1L LTR MaLR 460 610 -5 262 222 183 94 chr20 23362975 23363155 -48790727 + MARNA DNA Mariner 380 575 -11 780 191 7 0 chr20 23363775 23363911 -48789971 + MLT1H LTR MaLR 400 536 -13 858 246 22 0 chr20 23364346 23364525 -48789357 - MER3 DNA MER1_type -26 183 1 448 282 129 12 chr20 23365927 23366090 -48787792 - MIR SINE MIR -4 258 77 190 313 117 28 chr20 23366125 23366304 -48787578 + L2 LINE L2 1595 1789 -1525 180 286 79 16 chr20 23366586 23366649 -48787233 + L2 LINE L2 2989 3055 -217 2490 196 86 8 chr20 23366689 23367215 -48786667 - MLT1F1 LTR MaLR 0 567 1 2163 144 31 0 chr20 23367330 23367711 -48786171 - L1MB3 LINE L1 -1 6182 5790 977 34 17 0 chr20 23367711 23367827 -48786055 + L1PA7 LINE L1 6031 6150 -4 1691 164 58 0 chr20 23367827 23368119 -48785763 - L1MB3 LINE L1 -384 5799 5491 2213 102 0 3 chr20 23368125 23368429 -48785453 - AluY SINE Alu -4 307 5 1675 173 7 17 chr20 23368432 23368733 -48785149 - AluJb SINE Alu -14 298 1 301 241 0 0 chr20 23368756 23368814 -48785068 + L2 LINE L2 3215 3272 0 255 225 38 38 chr20 23369046 23369126 -48784756 - Charlie8 DNA MER1_type -2258 159 80 281 223 50 129 chr20 23369400 23369539 -48784343 + MLT1H LTR MaLR 419 546 -3 2668 229 29 62 chr20 23369728 23370178 -48783704 - L1ME1 LINE L1 -5 6161 5754 2071 109 0 22 chr20 23370178 23370490 -48783392 + AluSx SINE Alu 1 305 -7 2668 229 29 62 chr20 23370490 23370887 -48782995 - L1ME1 LINE L1 -412 5754 5346 461 252 191 0 chr20 23371070 23371217 -48782665 + MIR SINE MIR 78 252 -10 3574 160 30 8 chr20 23371295 23371952 -48781930 + L1MC2 LINE L1 5663 6334 -10 288 0 0 0 chr20 23372044 23372076 -48781806 + (TG)n Simple_repeat Simple_repeat 2 33 0 221 125 56 42 chr20 23372158 23372230 -48781652 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 384 268 204 0 chr20 23372253 23372395 -48781487 - MER5A DNA MER1_type -10 179 9 322 288 131 65 chr20 23372624 23372930 -48780952 - MLT1I LTR MaLR -4 405 80 2345 136 53 62 chr20 23373216 23373650 -48780232 + MSTB1 LTR MaLR 1 430 -2 918 188 59 20 chr20 23373701 23373903 -48779979 - MLT1A1 LTR MaLR 0 365 156 250 83 0 42 chr20 23373925 23373973 -48779909 + (TTC)n Simple_repeat Simple_repeat 3 48 0 823 169 0 0 chr20 23373983 23374107 -48779775 - AluJb SINE Alu -187 125 2 578 197 129 27 chr20 23374111 23374258 -48779624 - MLT1A1 LTR MaLR -212 162 1 334 139 88 31 chr20 23374260 23374339 -48779543 + L1ME LINE L1 5510 5580 -586 889 188 81 67 chr20 23374428 23374746 -48779136 - L1ME2 LINE L1 -1 6163 5827 826 246 183 43 chr20 23374822 23375075 -48778807 + LTR16C LTR ERVL 36 252 -239 2075 69 0 18 chr20 23375075 23375350 -48778532 - AluY SINE Alu -5 306 37 826 246 183 43 chr20 23375350 23375494 -48778388 + LTR16C LTR ERVL 252 489 -2 386 183 20 24 chr20 23376217 23376314 -48777568 + L1ME2 LINE L1 6069 6170 0 467 288 131 14 chr20 23377121 23377343 -48776539 + MLT1L LTR MaLR 200 447 -168 770 199 6 50 chr20 23377404 23377438 -48776444 - MER5A DNA MER1_type -35 154 120 1935 212 78 23 chr20 23377438 23377924 -48775958 + MLT2B2 LTR ERVL 3 515 0 770 199 6 50 chr20 23377924 23378050 -48775832 - MER5A DNA MER1_type -69 120 1 30 0 0 0 chr20 23378128 23378158 -48775724 + AT_rich Low_complexity Low_complexity 1 30 0 472 267 67 6 chr20 23378345 23378510 -48775372 + MER97a DNA MER1_type? 1 175 -719 2663 236 55 24 chr20 23378967 23379839 -48774043 + L1MC4a LINE L1 6850 7772 -13 977 189 18 54 chr20 23379855 23379987 -48773895 + MIR SINE MIR 28 150 -112 1757 127 4 0 chr20 23379987 23380254 -48773628 + AluJb SINE Alu 40 307 -5 977 189 18 54 chr20 23380254 23380343 -48773539 + MIR SINE MIR 150 241 -21 787 189 116 0 chr20 23382059 23382223 -48771659 - MER5A DNA MER1_type 0 189 7 1521 224 25 78 chr20 23382689 23383203 -48770679 + L1ME1 LINE L1 5596 6082 -84 310 261 130 29 chr20 23383139 23383277 -48770605 + L1MA10 LINE L1 6176 6327 -7 * 2221 97 3 0 chr20 23383807 23384115 -48769767 - AluSq SINE Alu -4 309 1 298 333 34 8 chr20 23384611 23384728 -48769154 + MIR SINE MIR 20 139 -123 381 306 82 11 chr20 23384960 23385143 -48768739 + Charlie8 DNA MER1_type 47 242 -2175 2086 189 128 22 chr20 23385297 23385804 -48768078 - MLT1E2 LTR MaLR -2 624 64 850 184 37 53 chr20 23385804 23385948 -48767934 + MLT1A2 LTR MaLR 1 143 -231 2632 135 31 2 chr20 23385948 23386364 -48767518 - MSTA LTR MaLR 0 428 1 850 184 37 53 chr20 23386364 23386409 -48767473 + MLT1A2 LTR MaLR 143 187 -187 750 109 14 14 chr20 23386409 23386547 -48767335 + (TTTC)n Simple_repeat Simple_repeat 1 138 0 725 224 120 6 chr20 23386562 23386745 -48767137 + MLT1A2 LTR MaLR 162 365 0 205 67 0 0 chr20 23387795 23387825 -48766057 - L2 LINE L2 -253 3060 3031 1018 242 40 40 chr20 23387851 23388116 -48765766 - LTR16C LTR ERVL -25 466 199 2944 90 57 9 chr20 23388116 23388498 -48765384 + MLT2A1 LTR ERVL 1 406 -38 360 0 0 0 chr20 23388498 23388538 -48765344 + (TA)n Simple_repeat Simple_repeat 2 41 0 2944 90 57 9 chr20 23388538 23388579 -48765303 + MLT2A1 LTR ERVL 406 444 0 1018 242 40 40 chr20 23388579 23388615 -48765267 - LTR16C LTR ERVL -291 200 165 229 281 18 0 chr20 23388756 23388813 -48765069 + MIR SINE MIR 10 67 -195 1929 130 27 0 chr20 23388841 23389142 -48764740 - AluSx SINE Alu -3 309 1 1513 241 117 28 chr20 23389153 23389625 -48764257 - L1ME3A LINE L1 0 6170 5657 201 289 0 0 chr20 23389675 23389727 -48764155 + L2 LINE L2 3217 3268 -4 656 94 85 0 chr20 23390642 23390748 -48763134 - L1PA16 LINE L1 -10 6156 6042 525 298 150 48 chr20 23391094 23391198 -48762684 - L2 LINE L2 0 3272 3180 2277 141 13 16 chr20 23391198 23391574 -48762308 + THE1C LTR MaLR 1 375 0 525 298 150 48 chr20 23391574 23391862 -48762020 - L2 LINE L2 -92 3180 2840 22 0 0 0 chr20 23392945 23392967 -48760915 + AT_rich Low_complexity Low_complexity 1 22 0 197 341 57 11 chr20 23393313 23393401 -48760481 - MIR SINE MIR -138 124 33 228 380 0 10 chr20 23393476 23393576 -48760306 - MIR3 SINE MIR -23 185 87 304 341 37 18 chr20 23393626 23393790 -48760092 + MIR3 SINE MIR 42 208 0 2796 136 12 9 chr20 23394622 23395049 -48758833 + MSTC LTR MaLR 1 428 0 622 266 11 5 chr20 23395271 23395449 -48758433 + MLT1G1 LTR MaLR 1 225 -324 460 146 138 27 chr20 23395542 23395704 -48758178 + MLT1G LTR MaLR 361 588 -2 411 309 138 16 chr20 23395735 23395923 -48757959 + MIR SINE MIR 45 255 -7 255 31 0 0 chr20 23396067 23396099 -48757783 + (TG)n Simple_repeat Simple_repeat 1 32 0 2030 89 11 0 chr20 23396151 23396421 -48757461 - AluSx SINE Alu -39 273 1 1118 243 55 44 chr20 23396717 23397153 -48756729 - L1ME3A LINE L1 -5 6165 5725 2470 49 0 0 chr20 23397466 23397773 -48756109 + AluY SINE Alu 1 307 -4 1249 221 84 43 chr20 23398087 23398428 -48755454 - HsTC2 DNA Tc2 -36 1862 1454 1740 176 11 22 chr20 23398428 23398786 -48755096 - L1MA7 LINE L1 0 6291 5938 1249 221 84 43 chr20 23398786 23398986 -48754896 - HsTC2 DNA Tc2 -444 1454 1264 318 311 7 47 chr20 23398984 23399132 -48754750 - HsTC2 DNA Tc2 -1751 147 6 * 298 232 7 126 chr20 23400445 23400596 -48753286 + MLT1F LTR MaLR 410 542 0 1432 146 35 178 chr20 23400905 23401384 -48752498 - MLT2D LTR ERVL -3 411 1 947 208 85 5 chr20 23401589 23401801 -48752081 - L1ME3A LINE L1 -5 6165 5937 1073 257 184 2 chr20 23401809 23402294 -48751588 + MLT1G1 LTR MaLR 1 592 -3 1104 279 65 0 chr20 23402298 23402639 -48751243 - L1ME3A LINE L1 -239 5931 5569 393 289 129 10 chr20 23403144 23403345 -48750537 - HsTC2 DNA Tc2 -1660 238 14 206 189 38 0 chr20 23403713 23403766 -48750116 + GA-rich Low_complexity Low_complexity 2 56 0 235 290 65 19 chr20 23403963 23404070 -48749812 + MIR SINE MIR 140 251 -11 869 210 58 15 chr20 23404338 23404543 -48749339 + MIR SINE MIR 43 256 -6 4942 166 21 13 chr20 23404714 23405570 -48748312 + MER49 LTR ERV1 6 868 -55 750 192 0 0 chr20 23405570 23405734 -48748148 + FRAM SINE Alu 1 74 0 1590 173 7 7 chr20 23405824 23406124 -48747758 - AluJb SINE Alu -5 307 8 1777 262 49 2 chr20 23406424 23406871 -48747011 + MLT1H LTR MaLR 12 479 -70 2269 99 0 0 chr20 23407798 23408101 -48745781 - AluSg SINE Alu -7 303 1 374 229 110 17 chr20 23408466 23408584 -48745298 - L1ME LINE L1 -500 5621 5493 538 244 23 8 chr20 23409410 23409541 -48744341 + MER94 DNA DNA 2 134 0 995 134 43 37 chr20 23410379 23410444 -48743438 - MLT1D LTR MaLR -317 188 125 2472 142 65 2 chr20 23410444 23410845 -48743037 - MSTB LTR MaLR 0 426 1 995 134 43 37 chr20 23410845 23410966 -48742916 - MLT1D LTR MaLR -380 125 1 1115 278 32 54 chr20 23412137 23412337 -48741545 - LTR16C LTR ERVL -9 482 279 661 224 106 12 chr20 23412337 23412507 -48741375 + MER5A DNA MER1_type 4 189 0 1115 278 32 54 chr20 23412507 23412748 -48741134 - LTR16C LTR ERVL -212 279 51 2612 158 19 0 chr20 23412974 23413392 -48740490 + MSTB LTR MaLR 1 426 0 1554 47 0 0 chr20 23413590 23413780 -48740102 - L1PA5 LINE L1 0 6154 5965 2559 155 29 0 chr20 23414053 23414473 -48739409 - MSTB1 LTR MaLR 0 432 1 305 316 138 44 chr20 23414807 23415050 -48738832 - LTR16A LTR ERVL -93 357 75 740 206 40 23 chr20 23415050 23415225 -48738657 - MER45A DNA AcHobo 0 178 1 305 316 138 44 chr20 23415225 23415301 -48738581 - LTR16A LTR ERVL -375 75 8 747 314 12 21 chr20 23415411 23415653 -48738229 + LTR16C LTR ERVL 252 491 0 1460 256 73 7 chr20 23416275 23416685 -48737197 + LTR16A LTR ERVL 12 448 -2 373 186 72 21 chr20 23416858 23416955 -48736927 - MER46C DNA MER2_type -235 103 2 1752 227 65 38 chr20 23417080 23417684 -48736198 - L1ME2 LINE L1 -2 6162 5543 356 308 24 19 chr20 23418090 23418209 -48735673 - MIR3 SINE MIR -48 160 41 1991 167 3 0 chr20 23418209 23418514 -48735368 - AluJo SINE Alu 0 312 7 356 308 24 19 chr20 23418514 23418542 -48735340 - MIR3 SINE MIR -167 41 15 435 297 43 7 chr20 23419213 23419351 -48734531 + MIR3 SINE MIR 44 186 -22 1004 223 143 54 chr20 23419457 23419848 -48734034 + MLT1H LTR MaLR 25 450 -99 4897 157 30 41 chr20 23420032 23421166 -48732716 - L1M4c LINE L1 -4549 1835 714 988 151 11 16 chr20 23421174 23421360 -48732522 - L1M4c LINE L1 -6169 215 31 1194 206 4 14 chr20 23421372 23421648 -48732234 - L1MC/D LINE L1 -750 5609 5337 522 318 46 14 chr20 23422198 23422415 -48731467 + LTR16C LTR ERVL 89 312 -179 2425 184 75 28 chr20 23422467 23423103 -48730779 - L1MC4 LINE L1 -1 8041 7376 371 303 79 0 chr20 23423611 23423763 -48730119 + MIR SINE MIR 97 260 -2 422 306 26 37 chr20 23423774 23423990 -48729892 + MIR SINE MIR 8 221 -41 257 73 0 24 chr20 23424445 23424486 -48729396 - MER5B DNA MER1_type 0 178 139 189 0 0 0 chr20 23424531 23424552 -48729330 + (CA)n Simple_repeat Simple_repeat 2 22 0 1918 220 12 12 chr20 23424573 23424982 -48728900 - MLT2C2 LTR ERVL -55 409 1 708 271 31 0 chr20 23425024 23425315 -48728567 - L1MCa LINE L1 -3293 3133 2834 2329 159 23 26 chr20 23425317 23425744 -48728138 + MSTB LTR MaLR 1 426 0 7266 176 17 90 chr20 23425744 23426203 -48727679 + MSTB-int LTR MaLR 1 492 -1159 444 189 0 0 chr20 23426203 23426277 -48727605 + AluJ/FRAM SINE Alu 222 295 -17 7266 176 17 90 chr20 23426277 23427520 -48726362 + MSTB-int LTR MaLR 492 1646 -5 2319 163 39 5 chr20 23427535 23427945 -48725937 + MSTB LTR MaLR 3 426 0 910 253 7 4 chr20 23427946 23428223 -48725659 - L1MCa LINE L1 -3591 2835 2558 24 53 0 0 chr20 23428227 23428265 -48725617 + AT_rich Low_complexity Low_complexity 1 38 0 654 125 50 0 chr20 23428265 23428385 -48725497 - L1PB1 LINE L1 -8 6859 6734 39957 58 2 2 chr20 23428396 23434529 -48719353 - L1PA5 LINE L1 -8 6146 11 381 156 0 0 chr20 23434534 23434611 -48719271 - L1PB1 LINE L1 -116 6751 6675 * 29205 114 12 55 chr20 23434606 23441045 -48712837 - L1PA7 LINE L1 0 6154 2 13171 185 39 13 chr20 23441043 23446263 -48707619 - L1PB1 LINE L1 -177 6690 1332 * 3579 221 94 6 chr20 23446278 23447339 -48706543 - L1PB1 LINE L1 -5703 1160 6 10992 159 81 6 chr20 23447354 23448252 -48705630 - L1MCa LINE L1 -3947 2479 1649 2608 151 22 0 chr20 23448252 23448669 -48705213 + MSTB LTR MaLR 1 426 0 10992 159 81 6 chr20 23448669 23450075 -48703807 - L1MCa LINE L1 -4777 1649 86 4701 156 37 46 chr20 23450081 23450783 -48703099 - L1MA9 LINE L1 -6 6306 5599 2398 84 0 3 chr20 23450783 23451082 -48702800 - AluY SINE Alu -13 298 1 4701 156 37 46 chr20 23451082 23452027 -48701855 - L1MA9 LINE L1 -713 5599 4671 2019 207 48 9 chr20 23452021 23452558 -48701324 + L1 LINE L1 2577 3134 -3012 * 537 101 13 0 chr20 23452561 23452640 -48701242 - L1MCa LINE L1 -6328 98 19 1922 130 4 4 chr20 23452648 23452925 -48700957 - AluJo SINE Alu -12 300 24 211 380 0 0 chr20 23453257 23453336 -48700546 - MIR SINE MIR -71 191 113 339 336 43 9 chr20 23453868 23453984 -48699898 + MIR3 SINE MIR 40 159 -49 472 292 38 32 chr20 23453990 23454175 -48699707 - MER117 DNA MER1_type -7 190 5 247 220 0 17 chr20 23454175 23454234 -48699648 + MIR3 SINE MIR 150 207 -1 201 238 0 0 chr20 23454370 23454412 -48699470 + MER5B DNA MER1_type 8 49 -129 1868 221 79 21 chr20 23454417 23454938 -48698944 - L1ME3 LINE L1 -6 6156 5606 2571 200 54 36 chr20 23454939 23455437 -48698445 - MER82 DNA MER2_type -1 652 139 1562 182 14 24 chr20 23455437 23455733 -48698149 - AluJb SINE Alu -19 293 1 2571 200 54 36 chr20 23455733 23455865 -48698017 - MER82 DNA MER2_type -514 139 11 403 319 28 0 chr20 23455914 23456055 -48697827 + MER5B DNA MER1_type 32 176 -2 873 152 0 104 chr20 23456830 23456923 -48696959 + MER5A DNA MER1_type 1 61 -128 689 145 47 72 chr20 23456923 23457116 -48696766 - MER53 DNA DNA -1 188 1 873 152 0 104 chr20 23457116 23457233 -48696649 + MER5A DNA MER1_type 61 189 0 484 299 42 69 chr20 23457724 23457985 -48695897 - MIR SINE MIR -3 259 6 1930 209 58 2 chr20 23458000 23458416 -48695466 + L1MC1 LINE L1 232 670 -5756 9795 214 46 20 chr20 23458417 23459111 -48694771 + L1MC1 LINE L1 2042 2716 -3897 1968 43 0 0 chr20 23459111 23459345 -48694537 + L1PA3 LINE L1 5908 6141 -14 9795 214 46 20 chr20 23459345 23462720 -48691162 + L1MC1 LINE L1 2716 6241 -372 2364 128 31 0 chr20 23462720 23463073 -48690809 + THE1B LTR MaLR 1 364 0 9795 214 46 20 chr20 23463073 23463456 -48690426 + L1MC1 LINE L1 6241 6613 0 684 228 111 0 chr20 23463799 23463988 -48689894 - LTR16C LTR ERVL 0 491 282 2174 171 77 2 chr20 23464033 23464460 -48689422 - MER65C LTR ERV1 -2 459 1 281 356 81 0 chr20 23464617 23464777 -48689105 - L2 LINE L2 -208 3064 2892 1794 181 11 14 chr20 23465338 23465686 -48688196 + MLT1A1 LTR MaLR 19 365 0 699 202 87 63 chr20 23465710 23465963 -48687919 - L1MC4 LINE L1 -209 7833 7575 558 78 9 43 chr20 23465983 23466099 -48687783 + (TA)n Simple_repeat Simple_repeat 1 112 0 348 243 9 47 chr20 23466138 23466245 -48687637 + L1MC4 LINE L1 6601 6703 -1339 327 164 0 135 chr20 23466283 23466387 -48687495 + L1MC4 LINE L1 6614 6703 -1339 1384 224 31 0 chr20 23466392 23466718 -48687164 - L1MC4 LINE L1 -472 7570 7235 296 228 60 5 chr20 23466740 23466856 -48687026 - MIR SINE MIR -65 143 16 817 257 78 4 chr20 23467091 23467348 -48686534 + LTR16C LTR ERVL 213 488 -3 588 293 100 0 chr20 23467759 23467998 -48685884 - LTR16A1 LTR ERVL -2 455 193 1648 203 3 0 chr20 23468110 23468411 -48685471 + AluJo SINE Alu 1 302 -10 1162 202 39 83 chr20 23468450 23468880 -48685002 - MLT1B LTR MaLR 0 390 1 997 152 38 38 chr20 23470091 23470268 -48683614 - L1MA7 LINE L1 -7 6284 6105 1979 146 35 30 chr20 23470268 23470639 -48683243 - THE1C LTR MaLR -2 373 1 997 152 38 38 chr20 23470639 23470672 -48683210 - L1MA7 LINE L1 -185 6106 6074 1072 230 38 21 chr20 23471382 23471669 -48682213 + LTR16C LTR ERVL 200 491 0 374 292 220 21 chr20 23473630 23474058 -48679824 + L1ME LINE L1 4085 4597 -1549 284 279 71 32 chr20 23474168 23474322 -48679560 + L1ME LINE L1 5008 5167 -979 3521 117 41 6 chr20 23474871 23475403 -48678479 + MER41C LTR ERV1 1 551 -3 750 144 0 120 chr20 23475627 23475835 -48678047 - MER53 DNA DNA -4 185 3 550 194 14 36 chr20 23476381 23476520 -48677362 - LTR37B LTR ERV1 0 468 333 284 239 15 0 chr20 23476544 23476611 -48677271 - LTR37A LTR ERV1 -248 178 111 257 321 29 21 chr20 23476651 23476791 -48677091 - LTR37B LTR ERV1 -327 141 1 238 167 44 78 chr20 23476845 23476935 -48676947 + L1M2 LINE L1 5350 5436 -861 413 299 67 6 chr20 23476959 23477123 -48676759 + L1ME LINE L1 5502 5675 -446 981 270 95 55 chr20 23477149 23477898 -48675984 - L2 LINE L2 -4 3309 2540 1276 170 42 213 chr20 23477937 23478115 -48675767 - L1MA9 LINE L1 -55 6257 6050 4902 133 69 34 chr20 23478115 23478988 -48674894 + MER4D LTR ERV1 1 903 0 1276 170 42 213 chr20 23478988 23479273 -48674609 - L1MA9 LINE L1 -262 6050 5924 1952 136 3 63 chr20 23479273 23479604 -48674278 - AluJo SINE Alu -1 311 1 1276 170 42 213 chr20 23479604 23479783 -48674099 - L1MA9 LINE L1 -388 5924 5716 293 175 29 124 chr20 23479827 23479964 -48673918 - L2 LINE L2 -843 2471 2348 1723 248 144 12 chr20 23480098 23480667 -48673215 - LTR48B LTR ERV1 0 644 1 3076 187 164 19 chr20 23481350 23482087 -48671795 + MER21B LTR ERV1 1 844 -19 260 239 30 15 chr20 23482539 23482606 -48671276 - L1ME4a LINE L1 -100 6021 5954 1843 141 151 10 chr20 23482606 23483010 -48670872 - MER31B LTR ERV1 0 466 6 1655 231 76 9 chr20 23483301 23483720 -48670162 - MER39 LTR ERV1 -1 706 260 298 315 9 27 chr20 23483943 23484054 -48669828 + MIR3 SINE MIR 67 175 -33 747 282 99 12 chr20 23484911 23485414 -48668468 + L2 LINE L2 2544 3154 -159 387 266 172 0 chr20 23485609 23485737 -48668145 - MER5A DNA MER1_type 0 189 40 3011 188 28 6 chr20 23485737 23486273 -48667609 - LTR39 LTR ERV1 0 783 236 2768 99 46 17 chr20 23486274 23486690 -48667192 + MSTA LTR MaLR 1 428 0 1534 136 0 4 chr20 23486690 23486932 -48666950 + MSTA-int LTR MaLR 1 241 -1410 3607 148 33 42 chr20 23486935 23487610 -48666272 + LTR8 LTR ERV1 1 669 -22 1449 104 78 17 chr20 23487630 23487641 -48666241 - LTR39 LTR ERV1 -538 245 236 2291 152 56 10 chr20 23487641 23488050 -48665832 + MSTA LTR MaLR 1 428 0 1449 104 78 17 chr20 23488050 23488269 -48665613 - LTR39 LTR ERV1 -547 236 1 2210 138 0 0 chr20 23488335 23488647 -48665235 - AluSx SINE Alu 0 312 1 322 263 30 38 chr20 23488702 23488865 -48665017 - MER5A DNA MER1_type -23 166 1 447 19 0 0 chr20 23489262 23489314 -48664568 + (CA)n Simple_repeat Simple_repeat 2 53 0 1189 262 113 15 chr20 23489453 23489781 -48664101 + MLT1G1 LTR MaLR 73 432 -163 949 289 75 30 chr20 23489929 23490355 -48663527 - MLT1J2 LTR MaLR -5 445 1 281 257 27 0 chr20 23490355 23490429 -48663453 + MIR SINE MIR 113 188 -74 227 252 0 87 chr20 23490990 23491093 -48662789 + MIR SINE MIR 119 212 -50 613 248 0 8 chr20 23491125 23491258 -48662624 - AluJo SINE Alu -61 251 120 1940 141 17 10 chr20 23491279 23491578 -48662304 - AluSx SINE Alu -9 303 3 694 188 16 0 chr20 23491693 23491821 -48662061 - AluJo SINE Alu -172 130 1 524 323 109 30 chr20 23492083 23492523 -48661359 + L1ME4a LINE L1 5573 6047 -74 21 0 0 0 chr20 23492595 23492616 -48661266 + AT_rich Low_complexity Low_complexity 1 21 0 1530 212 21 9 chr20 23495426 23495756 -48658126 - L1ME1 LINE L1 -5 6161 5828 604 273 6 11 chr20 23496318 23496494 -48657388 - MER5B DNA MER1_type -1 177 3 543 283 58 55 chr20 23496800 23497287 -48656595 + HAL1 LINE L1 1180 1667 -840 371 297 29 51 chr20 23497419 23497594 -48656288 + L1M4 LINE L1 3663 3833 -2313 1075 215 146 57 chr20 23497652 23497884 -48655998 + L1M4 LINE L1 4596 4806 -1340 1792 115 0 4 chr20 23497884 23498159 -48655723 - AluY SINE Alu 0 312 39 1075 215 146 57 chr20 23498159 23498418 -48655464 + L1M4 LINE L1 4806 5132 -1014 6962 50 3 31 chr20 23498507 23499526 -48654356 - L1PA6 LINE L1 -3 6151 5120 324 250 14 71 chr20 23499615 23499755 -48654127 - L1M4 LINE L1 -2165 3981 3850 2019 76 90 14 chr20 23500057 23500357 -48653525 - AluY SINE Alu 0 311 1 24 32 0 0 chr20 23500590 23500621 -48653261 + AT_rich Low_complexity Low_complexity 1 31 0 18042 33 0 0 chr20 23500723 23503618 -48650264 - L1PA4 LINE L1 0 6155 3263 1802 177 0 25 chr20 23503618 23503935 -48649947 - AluJb SINE Alu -3 309 1 4412 159 58 14 chr20 23504734 23505074 -48648808 + MER6 DNA MER2_type 1 325 -540 628 42 21 21 chr20 23505074 23505170 -48648712 + (GAAA)n Simple_repeat Simple_repeat 1 96 0 4412 159 58 14 chr20 23505170 23505658 -48648224 + MER6 DNA MER2_type 325 865 0 2520 223 64 68 chr20 23506339 23508023 -48645859 + L1MDb LINE L1 783 2464 -3942 6307 55 0 5 chr20 23508025 23508795 -48645087 - L1PA8 LINE L1 0 6172 5407 2350 79 31 0 chr20 23508991 23509283 -48644599 + AluY SINE Alu 1 301 -10 619 253 80 22 chr20 23509866 23510092 -48643790 - MIR SINE MIR -15 247 5 738 173 64 17 chr20 23511500 23511673 -48642209 - MER5A DNA MER1_type -1 188 8 633 217 53 0 chr20 23511690 23511842 -48642040 + MER5B DNA MER1_type 19 178 0 357 280 207 0 chr20 23512058 23512208 -48641674 + MER5A DNA MER1_type 9 189 0 353 288 130 0 chr20 23512529 23512675 -48641207 + MER5B DNA MER1_type 1 165 -13 1599 170 39 20 chr20 23513090 23513396 -48640486 - AluJo SINE Alu 0 312 1 2597 66 0 0 chr20 23513405 23513710 -48640172 - AluY SINE Alu -6 305 1 683 232 16 22 chr20 23514351 23514536 -48639346 - MER5A DNA MER1_type -5 184 1 257 215 152 0 chr20 23514722 23514801 -48639081 - MER5C DNA MER1_type 0 324 234 2271 83 0 51 chr20 23514806 23515118 -48638764 + AluSq SINE Alu 1 296 -17 232 289 26 26 chr20 23515168 23515244 -48638638 - MER5C DNA MER1_type -240 84 9 515 233 50 74 chr20 23516270 23516517 -48637365 - MLT1G LTR MaLR 0 590 299 358 319 17 17 chr20 23516591 23516707 -48637175 - MER5B DNA MER1_type -55 123 8 259 311 14 0 chr20 23516743 23516817 -48637065 + MER5A DNA MER1_type 9 83 -106 1192 182 52 10 chr20 23517848 23518155 -48635727 + MER33 DNA MER1_type 5 324 0 231 337 87 0 chr20 23518195 23518287 -48635595 + MIR SINE MIR 84 183 -79 240 287 85 67 chr20 23519455 23519619 -48634263 - MIR3 SINE MIR -8 200 34 249 345 35 7 chr20 23520106 23520251 -48633631 + MLT1H LTR MaLR 24 172 -377 782 275 10 0 chr20 23520505 23520712 -48633170 + MER3 DNA MER1_type 1 209 0 477 323 70 5 chr20 23520809 23521010 -48632872 - MIR SINE MIR -21 241 28 638 241 74 0 chr20 23521520 23521682 -48632200 + L1MB7 LINE L1 5908 6081 -103 1510 278 75 38 chr20 23522460 23522726 -48631156 + MLT1G LTR MaLR 38 293 -297 2075 147 39 30 chr20 23522726 23523087 -48630795 + THE1B LTR MaLR 1 364 0 1510 278 75 38 chr20 23523087 23523353 -48630529 + MLT1G LTR MaLR 293 590 0 276 320 50 0 chr20 23523356 23523456 -48630426 - L2 LINE L2 -5 3308 3204 384 318 25 86 chr20 23523699 23524061 -48629821 + L2 LINE L2 2933 3272 0 538 169 0 0 chr20 23525193 23525276 -48628606 + MIR SINE MIR 47 129 -133 3209 78 7 2 chr20 23525284 23525706 -48628176 - L1PA10 LINE L1 -171 5997 5574 429 222 23 108 chr20 23525706 23525882 -48628000 - L2 LINE L2 -44 3269 3109 1900 258 34 21 chr20 23525896 23526430 -48627452 + MLT1H1 LTR MaLR 15 555 0 249 251 117 74 chr20 23528427 23528590 -48625292 - MER5A DNA MER1_type -19 170 1 764 243 125 46 chr20 23528728 23529008 -48624874 - LTR33A LTR ERVL 0 523 222 27 29 0 0 chr20 23529157 23529191 -48624691 + AT_rich Low_complexity Low_complexity 1 34 0 313 282 154 0 chr20 23529196 23529313 -48624569 - MER5B DNA MER1_type -38 140 6 223 241 13 101 chr20 23529349 23529428 -48624454 + L2 LINE L2 3242 3313 0 304 320 14 20 chr20 23529987 23530134 -48623748 + CT-rich Low_complexity Low_complexity 2 147 0 272 346 37 22 chr20 23530579 23530715 -48623167 - MER5B DNA MER1_type -3 175 38 359 233 166 36 chr20 23531801 23531994 -48621888 - LTR16C LTR ERVL -107 384 167 732 221 116 35 chr20 23532908 23533080 -48620802 + MER5A DNA MER1_type 4 189 0 200 347 0 10 chr20 23533281 23533379 -48620503 + A-rich Low_complexity Low_complexity 5 101 0 952 104 92 0 chr20 23533858 23534022 -48619860 - L1MA2 LINE L1 -104 6200 6022 303 256 35 23 chr20 23534165 23534251 -48619631 + L1MC4 LINE L1 6617 6703 -1339 207 104 62 0 chr20 23534256 23534304 -48619578 + (TA)n Simple_repeat Simple_repeat 1 51 0 320 263 29 40 chr20 23534306 23534476 -48619406 - L1MC4 LINE L1 -1338 6704 6593 356 280 52 83 chr20 23534690 23534883 -48618999 + MIR3 SINE MIR 15 201 -7 190 289 0 0 chr20 23534964 23535016 -48618866 - L2 LINE L2 0 3272 3221 392 274 142 67 chr20 23535922 23536309 -48617573 - MLT1H LTR MaLR -16 533 118 235 320 265 7 chr20 23537208 23537355 -48616527 - MIR SINE MIR -14 248 64 198 340 3 41 chr20 23538418 23538566 -48615316 + MIR SINE MIR 71 212 -50 366 108 0 81 chr20 23538580 23538654 -48615228 - AluJo SINE Alu 0 302 235 4457 135 29 3 chr20 23538655 23539342 -48614540 - MER50 LTR ERV1 -23 711 7 1397 181 4 0 chr20 23539342 23539585 -48614297 - AluJo SINE Alu -68 244 1 263 303 11 0 chr20 23539644 23539733 -48614149 - MIR SINE MIR 0 262 173 186 306 125 0 chr20 23540029 23540101 -48613781 - L2 LINE L2 -23 3290 3210 484 250 24 74 chr20 23540382 23540620 -48613262 + L1ME4a LINE L1 5610 5828 -293 2031 115 10 6 chr20 23540756 23541068 -48612814 - AluSq SINE Alu 0 313 1 281 216 0 78 chr20 23541201 23541303 -48612579 + CT-rich Low_complexity Low_complexity 3 96 0 1031 218 97 91 chr20 23542913 23543377 -48610505 + MLT1G1 LTR MaLR 126 592 -3 1048 208 112 4 chr20 23543913 23544154 -48609728 - LTR16C LTR ERVL -18 473 207 2304 165 93 116 chr20 23544361 23544473 -48609409 - LTR8A LTR ERV1 0 727 614 1840 153 24 0 chr20 23544473 23544767 -48609115 + AluJo SINE Alu 1 301 -11 2304 165 93 116 chr20 23544767 23545237 -48608645 - LTR8A LTR ERV1 -113 614 163 1469 156 3 109 chr20 23545237 23545576 -48608306 - AluJb SINE Alu -9 303 1 2304 165 93 116 chr20 23545576 23545736 -48608146 - LTR8A LTR ERV1 -564 163 1 1902 274 72 14 chr20 23545781 23546368 -48607514 - L2 LINE L2 -447 2867 2247 1956 120 92 90 chr20 23546372 23546805 -48607077 - LTR47A LTR ERVL -18 434 1 751 125 0 25 chr20 23548113 23548233 -48605649 + FLAM_C SINE Alu 27 143 0 43 20 0 0 chr20 23548236 23548286 -48605596 + AT_rich Low_complexity Low_complexity 1 50 0 259 276 75 16 chr20 23548335 23548464 -48605418 + MIR SINE MIR 3 149 -59 471 240 149 34 chr20 23548941 23549149 -48604733 - L2 LINE L2 -2 3311 3080 327 148 19 0 chr20 23549821 23549875 -48604007 + MLT1H LTR MaLR 458 512 -37 746 167 31 62 chr20 23549882 23550044 -48603838 - L1MA9 LINE L1 -37 6275 6119 276 216 0 0 chr20 23550044 23550095 -48603787 + MLT1H LTR MaLR 496 546 -3 287 284 43 17 chr20 23551485 23551601 -48602281 + MIR SINE MIR 124 242 -20 1388 248 108 0 chr20 23552052 23552460 -48601422 + LTR16C LTR ERVL 36 487 -4 2314 95 0 0 chr20 23554209 23554515 -48599367 - AluSc SINE Alu -3 306 1 375 23 0 0 chr20 23554586 23554630 -48599252 + (CA)n Simple_repeat Simple_repeat 2 45 0 270 284 21 53 chr20 23555575 23555670 -48598212 + MER58 DNA MER1_type 1 92 -249 885 121 0 23 chr20 23555691 23555823 -48598059 - FLAM_C SINE Alu -3 130 2 376 224 12 0 chr20 23555873 23555958 -48597924 + MER58 DNA MER1_type 2332 2417 -3 331 282 24 112 chr20 23556222 23556428 -48597454 + L1ME3 LINE L1 5750 5937 -225 210 171 0 0 chr20 23556447 23556488 -48597394 + (TG)n Simple_repeat Simple_repeat 1 41 0 221 279 0 16 chr20 23556559 23556620 -48597262 + GA-rich Low_complexity Low_complexity 3 62 0 1571 124 28 8 chr20 23556689 23556939 -48596943 + L1PA8 LINE L1 5918 6172 0 747 279 40 12 chr20 23557035 23557286 -48596596 + MIR SINE MIR 3 260 -2 606 250 57 10 chr20 23557653 23557845 -48596037 - L1ME1 LINE L1 -12 6154 5954 301 239 42 0 chr20 23558164 23558235 -48595647 - MIR3 SINE MIR -43 165 92 4225 242 100 39 chr20 23558652 23560340 -48593542 + L1MCc LINE L1 21 1606 -5335 297 118 0 0 chr20 23560340 23560391 -48593491 + (CA)n Simple_repeat Simple_repeat 2 52 0 4225 242 100 39 chr20 23560391 23561718 -48592164 + L1MCc LINE L1 1606 3450 -3491 1508 90 22 9 chr20 23561718 23561940 -48591942 + AluY SINE Alu 77 301 -10 4225 242 100 39 chr20 23561940 23562173 -48591709 + L1MCc LINE L1 3450 3667 -3274 320 338 6 25 chr20 23562184 23562341 -48591541 + GA-rich Low_complexity Low_complexity 4 157 0 505 256 103 31 chr20 23562905 23563100 -48590782 + LTR16C LTR ERVL 283 491 0 1967 139 3 19 chr20 23563245 23563562 -48590320 + AluSx SINE Alu 1 312 0 966 248 123 77 chr20 23564943 23565463 -48588419 + MLT1H1 LTR MaLR 12 555 0 206 333 191 12 chr20 23565600 23565762 -48588120 - MIR3 SINE MIR -16 192 2 250 225 70 31 chr20 23566140 23566269 -48587613 - L2 LINE L2 -212 3060 2927 278 241 146 50 chr20 23566509 23566817 -48587065 - MLT1H LTR MaLR 0 549 137 196 156 0 0 chr20 23567319 23567351 -48586531 - MER5A DNA MER1_type -115 74 43 181 267 0 67 chr20 23567320 23567380 -48586502 + MER5A DNA MER1_type 128 183 -6 * 274 254 0 0 chr20 23567375 23567434 -48586448 + MIR SINE MIR 22 80 -182 1198 210 29 0 chr20 23567435 23567673 -48586209 + MLT1E1 LTR MaLR 410 654 0 835 214 19 147 chr20 23567687 23568074 -48585808 - MLT1J LTR MaLR -98 413 42 740 170 9 0 chr20 23568079 23568191 -48585691 + FRAM SINE Alu 35 147 -29 17820 151 18 26 chr20 23568191 23571270 -48582612 - L1P3 LINE L1 -2149 4312 1214 186 43 0 0 chr20 23571270 23571293 -48582589 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 17820 151 18 26 chr20 23571293 23571516 -48582366 - L1P3 LINE L1 -5247 1214 991 1027 132 6 24 chr20 23571530 23571697 -48582185 - MLT1D-int LTR MaLR -1206 165 2 1425 190 161 67 chr20 23571697 23572133 -48581749 - MLT1D LTR MaLR -21 484 8 1230 176 13 25 chr20 23572140 23572378 -48581504 + L1MC3 LINE L1 6059 6293 -1492 * 4957 161 52 34 chr20 23572373 23572610 -48581272 + L1MC3 LINE L1 6745 6976 -809 1855 170 0 16 chr20 23572610 23572922 -48580960 + AluJo SINE Alu 1 307 -5 4957 161 52 34 chr20 23572922 23573707 -48580175 + L1MC3 LINE L1 6976 7785 0 1056 119 0 0 chr20 23573910 23574053 -48579829 + AluSg/x SINE Alu 143 285 -27 315 0 0 0 chr20 23574053 23574088 -48579794 + (CA)n Simple_repeat Simple_repeat 2 36 0 1351 97 0 0 chr20 23574282 23574457 -48579425 + AluSg/x SINE Alu 132 306 -4 183 164 49 131 chr20 23574508 23574569 -48579313 + L3 LINE CR1 1520 1575 -2 522 148 0 21 chr20 23575313 23575455 -48578427 + (TTTTTG)n Simple_repeat Simple_repeat 5 143 0 992 295 73 29 chr20 23578021 23578739 -48575143 + L2 LINE L2 2543 3308 -5 367 133 17 0 chr20 23579091 23579151 -48574731 - MER5A DNA MER1_type 0 189 129 3852 201 84 11 chr20 23579151 23580010 -48573872 - MER63C DNA MER1_type -8 922 1 484 301 32 0 chr20 23580015 23580138 -48573744 - MER5A DNA MER1_type -62 127 1 1025 190 66 22 chr20 23580680 23580906 -48572976 + MIR SINE MIR 14 249 -13 216 176 39 0 chr20 23580936 23580987 -48572895 + (TTTAA)n Simple_repeat Simple_repeat 5 57 0 736 203 16 0 chr20 23581142 23581270 -48572612 - FLAM_A SINE Alu -2 131 2 227 313 60 0 chr20 23582828 23582911 -48570971 + MIR3 SINE MIR 117 204 -4 34 79 0 0 chr20 23583167 23583243 -48570639 + AT_rich Low_complexity Low_complexity 1 76 0 31519 22 0 0 chr20 23583258 23587682 -48566200 + L1HS LINE L1 1731 6153 -2 41 72 0 0 chr20 23587683 23587766 -48566116 + AT_rich Low_complexity Low_complexity 1 83 0 21 36 0 0 chr20 23587776 23587804 -48566078 + AT_rich Low_complexity Low_complexity 1 28 0 1829 189 56 14 chr20 23587902 23588257 -48565625 + MLT1A2 LTR MaLR 1 370 -4 865 231 102 9 chr20 23588348 23588573 -48565309 - MIR SINE MIR 0 262 17 248 316 13 0 chr20 23590225 23590304 -48563578 + (TG)n Simple_repeat Simple_repeat 1 80 0 652 240 148 20 chr20 23591522 23591663 -48562219 + MLT1F LTR MaLR 43 165 -377 330 26 0 0 chr20 23591663 23591702 -48562180 + (TC)n Simple_repeat Simple_repeat 2 40 0 652 240 148 20 chr20 23591702 23591957 -48561925 + MLT1F LTR MaLR 165 542 0 396 290 59 25 chr20 23592274 23592512 -48561370 - L1ME4a LINE L1 -239 5882 5637 347 301 87 82 chr20 23592728 23593117 -48560765 - L1ME4a LINE L1 -1739 4407 4017 254 203 57 138 chr20 23593338 23593461 -48560421 - MLT1K LTR MaLR -286 302 190 1127 170 5 5 chr20 23593522 23593722 -48560160 + L1PB1 LINE L1 1 200 -6663 6986 108 44 3 chr20 23593724 23595331 -48558551 + L1PB1 LINE L1 636 2427 -4436 31513 111 7 22 chr20 23595337 23601805 -48552077 + L1PA7 LINE L1 8 6469 0 14955 165 29 18 chr20 23601801 23604678 -48549204 + L1PB1 LINE L1 2411 5255 -1612 * 2019 119 7 7 chr20 23604678 23604963 -48548919 + AluSg SINE Alu 1 285 -25 207 0 0 0 chr20 23604963 23604986 -48548896 + (CA)n Simple_repeat Simple_repeat 2 24 0 14955 165 29 18 chr20 23604986 23606506 -48547376 + L1PB1 LINE L1 5254 6865 -2 194 260 78 39 chr20 23606878 23606955 -48546927 + L3 LINE CR1 926 1005 -572 4570 39 2 0 chr20 23607898 23608411 -48545471 + L1PA5 LINE L1 5636 6149 -5 238 287 156 54 chr20 23608734 23608901 -48544981 - MIR3 SINE MIR -5 203 20 21 36 0 0 chr20 23609893 23609921 -48543961 + AT_rich Low_complexity Low_complexity 1 28 0 2489 53 0 20 chr20 23610606 23610906 -48542976 - AluY SINE Alu -17 294 1 596 317 60 25 chr20 23611905 23612337 -48541545 + L1ME LINE L1 5262 5708 -413 1068 248 17 4 chr20 23612418 23612656 -48541226 + MIR SINE MIR 12 252 -10 2082 254 31 5 chr20 23612774 23613348 -48540534 + L1ME1 LINE L1 3575 4163 -1983 1460 231 48 13 chr20 23613349 23613722 -48540160 + L1ME1 LINE L1 5674 6059 -107 246 320 8 11 chr20 23614465 23614589 -48539293 + MIR3 SINE MIR 37 197 -11 573 204 0 0 chr20 23615009 23615112 -48538770 + L1MD2 LINE L1 6036 6138 -221 303 49 0 0 chr20 23615115 23615156 -48538726 + (CA)n Simple_repeat Simple_repeat 1 41 0 3245 163 101 12 chr20 23615166 23615812 -48538070 + MER44D DNA MER2_type 1 703 -2 631 201 65 0 chr20 23615814 23615953 -48537929 + L1MD2 LINE L1 6156 6303 -56 2134 113 3 0 chr20 23615971 23616253 -48537629 - AluSq SINE Alu -30 283 1 272 149 90 45 chr20 23616253 23616320 -48537562 + L1MD2 LINE L1 6289 6358 -1 817 93 16 0 chr20 23616418 23616547 -48537335 + (GGAA)n Simple_repeat Simple_repeat 1 131 0 3253 263 62 44 chr20 23616672 23618036 -48535846 + HAL1 LINE L1 577 1964 -543 1048 155 12 0 chr20 23618041 23618202 -48535680 + FRAM SINE Alu 1 162 -14 672 225 6 55 chr20 23618378 23618560 -48535322 + MER5B DNA MER1_type 4 176 -2 344 255 40 13 chr20 23619469 23619618 -48534264 - L1MC/D LINE L1 -2342 5466 5314 333 282 74 15 chr20 23619912 23620114 -48533768 - LTR33 LTR ERVL -11 510 297 209 358 12 0 chr20 23620298 23620379 -48533503 + MIR SINE MIR 59 140 -122 241 159 0 0 chr20 23620986 23621030 -48532852 + MADE1 DNA Mariner 37 80 0 284 290 213 41 chr20 23621178 23621568 -48532314 - L2 LINE L2 -17 3296 2840 244 258 0 30 chr20 23621792 23621858 -48532024 + (TATG)n Simple_repeat Simple_repeat 1 64 0 1289 258 34 59 chr20 23621929 23622521 -48531361 + MLT1G1 LTR MaLR 15 591 -4 208 125 0 0 chr20 23622540 23622572 -48531310 + (CATA)n Simple_repeat Simple_repeat 3 34 0 185 136 0 45 chr20 23622573 23622617 -48531265 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 1266 162 31 31 chr20 23622625 23622854 -48531028 - AluJo SINE Alu 0 312 84 229 271 35 35 chr20 23623209 23623294 -48530588 + MIR SINE MIR 178 262 0 267 202 32 0 chr20 23623604 23623698 -48530184 + GA-rich Low_complexity Low_complexity 4 100 0 229 382 18 18 chr20 23623870 23623980 -48529902 + MIR SINE MIR 21 130 -132 216 200 40 53 chr20 23624377 23624452 -48529430 + GA-rich Low_complexity Low_complexity 2 75 0 199 0 65 0 chr20 23625296 23625327 -48528555 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 357 294 87 104 chr20 23626214 23626365 -48527517 + L1MB4 LINE L1 485 637 -6212 213 39 0 0 chr20 23626365 23626391 -48527491 + (CGG)n Simple_repeat Simple_repeat 1 26 0 357 294 87 104 chr20 23626391 23626756 -48527126 + L1MB4 LINE L1 637 1016 -5833 319 295 92 92 chr20 23626717 23627209 -48526673 - L1M2 LINE L1 -5706 1143 652 * 2393 104 0 0 chr20 23630378 23630686 -48523196 + AluSx SINE Alu 1 308 -4 540 264 66 31 chr20 23630690 23631001 -48522881 - L1ME3 LINE L1 -8 6154 5813 239 282 161 24 chr20 23631463 23631587 -48522295 + MER5A DNA MER1_type 49 189 0 29 28 0 0 chr20 23632372 23632408 -48521474 + AT_rich Low_complexity Low_complexity 1 36 0 207 263 182 20 chr20 23632628 23632727 -48521155 + MIR SINE MIR 26 140 -122 305 189 0 122 chr20 23633477 23633567 -48520315 + MER5A DNA MER1_type 4 82 -107 1754 147 0 0 chr20 23634229 23634480 -48519402 - AluSx SINE Alu -15 297 47 567 278 15 0 chr20 23634498 23634696 -48519186 - L1MD3 LINE L1 -10 7985 7785 * 879 225 237 6 chr20 23634692 23635034 -48518848 - L1MC4a LINE L1 -289 7519 7099 763 153 73 0 chr20 23635171 23635295 -48518587 - FLAM_C SINE Alu -10 133 1 2406 241 71 30 chr20 23635306 23635520 -48518362 + L1MB4 LINE L1 1174 1378 -5472 981 54 8 0 chr20 23635520 23635650 -48518232 - L1PB1 LINE L1 0 6151 6021 2406 241 71 30 chr20 23635650 23636365 -48517517 + L1MB4 LINE L1 1378 2141 -4709 1577 240 32 40 chr20 23636390 23636919 -48516963 + L1MA9 LINE L1 5750 6274 -38 2272 252 40 43 chr20 23636938 23637709 -48516173 + L1MB4 LINE L1 2336 3060 -3788 2818 10 0 0 chr20 23637709 23638016 -48515866 + AluYb8 SINE Alu 1 307 -11 2272 252 40 43 chr20 23638016 23638655 -48515227 + L1MB4 LINE L1 3060 3699 -3149 * 8645 201 38 29 chr20 23638654 23641390 -48512492 + L1PA16 LINE L1 2700 5479 -687 2102 128 7 3 chr20 23641390 23641694 -48512188 + AluSc SINE Alu 1 305 -4 8645 201 38 29 chr20 23641694 23642369 -48511513 + L1PA16 LINE L1 5479 6146 -20 930 286 12 20 chr20 23642441 23642696 -48511186 + MIR SINE MIR 10 262 0 271 272 143 58 chr20 23643094 23643318 -48510564 + L1ME LINE L1 5536 5778 -343 1362 194 23 23 chr20 23643331 23643641 -48510241 + MLT1A1 LTR MaLR 1 310 -55 189 0 0 0 chr20 23643641 23643662 -48510220 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 2495 241 69 9 chr20 23643804 23644757 -48509125 + L1MB4 LINE L1 3685 4694 -2154 661 237 120 4 chr20 23644757 23645031 -48508851 + L1MB4 LINE L1 5058 5363 -1485 8286 217 53 21 chr20 23645032 23645837 -48508045 + L1MC1 LINE L1 21 799 -5627 261 0 0 0 chr20 23645837 23645866 -48508016 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8286 217 53 21 chr20 23645866 23649530 -48504352 + L1MC1 LINE L1 799 4344 -2082 2807 13 0 0 chr20 23649530 23649837 -48504045 + AluY SINE Alu 1 307 -4 8286 217 53 21 chr20 23649837 23650020 -48503862 + L1MC1 LINE L1 4344 4520 -1906 2223 133 11 24 chr20 23650020 23650389 -48503493 - THE1B LTR MaLR 0 364 1 8286 217 53 21 chr20 23650389 23650440 -48503442 + L1MC1 LINE L1 4520 4568 -1858 7649 56 2 2 chr20 23650440 23652192 -48501690 + L1PA6 LINE L1 4396 6149 -5 8286 217 53 21 chr20 23652192 23652570 -48501312 + L1MC1 LINE L1 4568 5357 -1069 777 200 89 0 chr20 23652798 23652988 -48500894 + L1MC1 LINE L1 5369 5575 -851 1371 172 0 38 chr20 23652988 23653250 -48500632 + AluJb SINE Alu 56 307 -5 3156 151 24 7 chr20 23653251 23653848 -48500034 + L1MC1 LINE L1 5582 6188 -425 5433 73 5 5 chr20 23654085 23654457 -48499425 - L1PB1 LINE L1 0 6151 5780 189 0 0 0 chr20 23654457 23654478 -48499404 + (TA)n Simple_repeat Simple_repeat 2 22 0 5433 73 5 5 chr20 23654478 23654869 -48499013 - L1PB1 LINE L1 -370 5781 5388 1421 197 41 3 chr20 23654899 23655214 -48498668 + L1MC1 LINE L1 6261 6587 -26 2593 225 81 10 chr20 23655263 23656688 -48497194 + L1MB4 LINE L1 5348 6882 0 419 250 7 4 chr20 23656722 23656863 -48497019 + MIR SINE MIR 69 260 -2 1708 162 84 6 chr20 23656863 23657197 -48496685 - MER46B DNA MER2_type 0 236 2 837 175 81 3 chr20 23659780 23660065 -48493817 + MLT1B LTR MaLR 1 390 0 794 235 92 49 chr20 23660362 23660690 -48493192 - MER2 DNA MER2_type -1 343 2 2661 238 62 25 chr20 23661401 23662234 -48491648 - L1MCa LINE L1 -3181 3383 2582 2968 168 0 2 chr20 23662234 23662721 -48491161 - MER66B LTR ERV1 0 486 1 2661 238 62 25 chr20 23662721 23663493 -48490389 - L1MCa LINE L1 -3982 2582 1840 2115 146 0 0 chr20 23663493 23663801 -48490081 + AluSx SINE Alu 1 308 -4 2661 238 62 25 chr20 23663801 23663846 -48490036 - L1MCa LINE L1 -4724 1840 1798 207 69 0 0 chr20 23663846 23663875 -48490007 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2661 238 62 25 chr20 23663875 23664324 -48489558 - L1MCa LINE L1 -4766 1798 1065 329 114 71 29 chr20 23664328 23664398 -48489484 - L1MA9 LINE L1 0 6312 6240 410 196 0 0 chr20 23664410 23664507 -48489375 - L1MA8 LINE L1 -3 6288 6192 284 180 0 0 chr20 23664515 23664565 -48489317 + Tigger1 DNA MER2_type 1 50 -2368 8400 140 26 1 chr20 23664568 23666004 -48487878 + Tigger1 DNA MER2_type 946 2418 0 1993 251 76 40 chr20 23666004 23666951 -48486931 - L1MCa LINE L1 -4976 1069 112 2387 46 0 7 chr20 23666951 23667277 -48486605 - AluY SINE Alu 0 324 1 1993 251 76 40 chr20 23667277 23667347 -48486535 - L1MCa LINE L1 -5933 112 46 375 271 95 65 chr20 23667745 23668070 -48485812 - MLT1H LTR MaLR -120 429 95 2137 156 32 0 chr20 23668233 23668611 -48485271 - MLT1B LTR MaLR 0 390 1 290 309 24 8 chr20 23669188 23669311 -48484571 + T-rich Low_complexity Low_complexity 4 128 0 357 348 119 10 chr20 23669663 23669864 -48484018 + L1MEd LINE L1 126 348 -5771 295 275 50 122 chr20 23669947 23670305 -48483577 + L1MEd LINE L1 435 724 -5395 225 0 0 0 chr20 23670305 23670330 -48483552 + (CAA)n Simple_repeat Simple_repeat 3 27 0 295 275 50 122 chr20 23670330 23670644 -48483238 + L1MEd LINE L1 724 1059 -5060 1710 243 35 22 chr20 23670758 23671446 -48482436 + L1MEd LINE L1 2518 3214 -2915 37587 77 5 8 chr20 23671447 23677618 -48476264 + L1PA5 LINE L1 4 6151 -3 5485 233 63 32 chr20 23677619 23679572 -48474310 + L1MEd LINE L1 3196 5209 -920 1974 93 93 0 chr20 23679732 23680002 -48473880 + AluSq SINE Alu 1 295 -18 415 264 111 43 chr20 23680226 23680461 -48473421 + L1ME3A LINE L1 2227 2477 -3669 329 270 102 102 chr20 23680800 23681593 -48472289 + L1ME3A LINE L1 3065 3857 -2289 278 277 80 11 chr20 23681764 23681952 -48471930 + L1ME3A LINE L1 5149 5349 -797 1340 231 55 14 chr20 23681966 23682312 -48471570 + MLT1A1 LTR MaLR 6 365 0 318 223 27 38 chr20 23682323 23682507 -48471375 + L1ME3A LINE L1 5365 5586 -576 7163 117 42 11 chr20 23682547 23683741 -48470141 + Tigger3b DNA MER2_type 1 1231 0 244 270 71 68 chr20 23683846 23684056 -48469826 + L1ME3A LINE L1 5688 5901 -269 1916 98 34 142 chr20 23684056 23684464 -48469418 + THE1B LTR MaLR 1 364 0 244 270 71 68 chr20 23684464 23684505 -48469377 + L1ME3A LINE L1 5901 5940 -230 345 301 49 38 chr20 23685130 23685313 -48468569 + LTR33A LTR ERVL 68 252 -271 442 224 82 54 chr20 23685524 23685671 -48468211 + MIR SINE MIR 20 170 -92 9134 227 53 59 chr20 23685686 23689367 -48464515 - L1MC2 LINE L1 -427 6197 2496 1504 215 6 13 chr20 23689367 23689679 -48464203 - AluJo SINE Alu -2 310 1 9134 227 53 59 chr20 23689679 23691352 -48462530 - L1MC2 LINE L1 -4128 2496 886 2389 41 6 41 chr20 23691352 23691668 -48462214 + AluY SINE Alu 1 305 -6 9134 227 53 59 chr20 23691668 23692531 -48461351 - L1MC2 LINE L1 -5738 886 19 22 0 0 0 chr20 23692780 23692802 -48461080 + AT_rich Low_complexity Low_complexity 1 22 0 381 294 106 12 chr20 23692815 23692975 -48460907 - MIR SINE MIR -86 176 2 259 328 143 0 chr20 23693396 23693515 -48460367 + MIR SINE MIR 91 226 -36 371 286 34 42 chr20 23693683 23693802 -48460080 - L2 LINE L2 -1 3271 3154 1911 179 79 28 chr20 23693965 23694434 -48459448 - MLT1D LTR MaLR -7 498 6 229 118 118 32 chr20 23695120 23695213 -48458669 + (TTAAA)n Simple_repeat Simple_repeat 3 103 0 1420 218 104 14 chr20 23695263 23695685 -48458197 - MLT1C LTR MaLR -2 465 6 1402 243 197 10 chr20 23696760 23697369 -48456513 - LTR50 LTR ERVL -53 742 20 1837 154 40 27 chr20 23698510 23698880 -48455002 + THE1C LTR MaLR 1 375 0 10284 102 48 14 chr20 23698880 23700407 -48453475 + THE1C-int LTR MaLR 1 1580 0 1945 151 19 24 chr20 23700407 23700784 -48453098 + THE1C LTR MaLR 1 375 0 1921 158 3 7 chr20 23701931 23702222 -48451660 - AluSx SINE Alu -22 290 1 461 288 74 54 chr20 23702277 23702453 -48451429 + MIR SINE MIR 1 179 -29 1438 199 56 58 chr20 23703198 23703750 -48450132 + L1MC5 LINE L1 7171 7721 -240 1809 216 64 28 chr20 23703776 23704071 -48449811 + MER77 LTR ERV1 54 378 -227 1290 232 46 25 chr20 23704071 23704437 -48449445 - MLT1A2 LTR MaLR 0 374 1 1809 216 64 28 chr20 23704437 23704669 -48449213 + MER77 LTR ERV1 378 600 -5 1408 209 82 24 chr20 23706408 23706824 -48447058 + L1ME2 LINE L1 5661 6100 -64 761 89 0 0 chr20 23706858 23706959 -48446923 + AluSg/x SINE Alu 177 277 -35 198 0 0 0 chr20 23706978 23707000 -48446882 + (TA)n Simple_repeat Simple_repeat 2 23 0 201 196 0 0 chr20 23707459 23707505 -48446377 + GA-rich Low_complexity Low_complexity 2 47 0 272 27 27 0 chr20 23707711 23707748 -48446134 + (CA)n Simple_repeat Simple_repeat 1 38 0 181 295 39 51 chr20 23708066 23708144 -48445738 + L3b LINE CR1 1393 1469 -114 350 206 78 29 chr20 23709384 23709486 -48444396 + L1MD3 LINE L1 7869 7975 -20 * 1121 232 88 18 chr20 23709485 23709869 -48444013 + L1MA9 LINE L1 7 417 -6613 6823 186 27 10 chr20 23709902 23711454 -48442428 + L1MA9 LINE L1 3835 5413 -1693 4486 166 13 13 chr20 23711873 23713147 -48440735 + L1MA9 LINE L1 5431 6711 -561 673 185 37 0 chr20 23713144 23713279 -48440603 + L1M3e LINE L1 108 247 -6783 * 302 169 15 0 chr20 23713336 23713401 -48440481 + (TA)n Simple_repeat Simple_repeat 1 66 0 243 0 0 0 chr20 23713400 23713427 -48440455 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 2821 151 31 6 chr20 23713427 23713945 -48439937 + L1MA9 LINE L1 6742 7272 0 1570 157 12 104 chr20 23713987 23714389 -48439493 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr20 23714546 23714568 -48439314 + GC_rich Low_complexity Low_complexity 1 22 0 201 162 0 0 chr20 23714588 23714625 -48439257 + L2 LINE L2 3219 3255 -17 1871 68 20 4 chr20 23715055 23715305 -48438577 + AluSx SINE Alu 36 289 -23 216 0 0 0 chr20 23715305 23715329 -48438553 + (CA)n Simple_repeat Simple_repeat 2 25 0 2168 58 0 0 chr20 23715364 23715623 -48438259 + AluY SINE Alu 45 303 -8 22 56 0 0 chr20 23715775 23715811 -48438071 + AT_rich Low_complexity Low_complexity 1 36 0 563 122 0 47 chr20 23715980 23716087 -48437795 + L1PA13 LINE L1 6058 6159 -4 347 297 65 61 chr20 23716325 23716554 -48437328 - MLT1J LTR MaLR -55 456 227 1070 58 32 32 chr20 23717040 23717318 -48436564 + (TAGA)n Simple_repeat Simple_repeat 1 278 0 223 376 40 7 chr20 23717319 23717468 -48436414 - MIR SINE MIR -4 258 105 800 299 106 23 chr20 23718936 23719334 -48434548 + LTR16C LTR ERVL 2 432 -59 431 303 102 15 chr20 23719560 23719920 -48433962 - L1ME4a LINE L1 -3 6118 5725 6148 16 0 1 chr20 23720127 23720816 -48433066 + L1PA2 LINE L1 5468 6155 0 244 171 11 11 chr20 23721091 23721179 -48432703 + (TA)n Simple_repeat Simple_repeat 1 88 0 823 157 0 0 chr20 23721188 23721303 -48432579 - AluJb SINE Alu -197 115 1 2242 102 0 58 chr20 23722457 23722782 -48431100 + AluSx SINE Alu 1 306 -6 1570 122 30 134 chr20 23723792 23724194 -48429688 - THE1B LTR MaLR -4 360 1 304 340 65 28 chr20 23724860 23725151 -48428731 + L2 LINE L2 3008 3309 -4 1555 235 83 24 chr20 23725289 23725757 -48428125 - MLT1G LTR MaLR 0 590 95 1858 222 36 67 chr20 23725871 23726367 -48427515 + MLT1E2 LTR MaLR 137 617 -9 437 151 0 47 chr20 23726391 23726477 -48427405 - MLT1G LTR MaLR -473 82 1 965 169 87 0 chr20 23727082 23727266 -48426616 + MER3 DNA MER1_type 2 201 -8 953 157 25 91 chr20 23729295 23729537 -48424345 + MER96B DNA MER1_type? 192 417 0 2332 97 0 7 chr20 23729641 23729939 -48423943 + AluSc SINE Alu 1 296 -13 243 300 107 9 chr20 23730055 23730288 -48423594 + L1MDa LINE L1 1846 2101 -4439 225 265 39 0 chr20 23730672 23730774 -48423108 + L1ME LINE L1 5791 5896 -274 24 67 0 0 chr20 23731156 23731201 -48422681 + AT_rich Low_complexity Low_complexity 1 45 0 509 279 56 6 chr20 23732145 23732324 -48421558 - MIR SINE MIR -60 202 15 239 275 58 43 chr20 23732564 23732702 -48421180 + MIR SINE MIR 52 191 -71 912 203 104 111 chr20 23733685 23734090 -48419792 - L1MEc LINE L1 -5958 438 37 2749 208 107 7 chr20 23734090 23734764 -48419118 + MER63C DNA MER1_type 190 930 0 319 328 188 16 chr20 23734984 23735176 -48418706 + MIR SINE MIR 2 226 -36 720 220 145 16 chr20 23735400 23735586 -48418296 - MER63A DNA MER1_type 0 210 1 761 262 56 97 chr20 23736162 23736605 -48417277 + MLT1H LTR MaLR 12 436 -113 738 197 8 0 chr20 23737180 23737307 -48416575 - MER82 DNA MER2_type -524 129 2 305 24 24 0 chr20 23737308 23737350 -48416532 + (TG)n Simple_repeat Simple_repeat 2 44 0 214 308 108 31 chr20 23737554 23737684 -48416198 - L2 LINE L2 -14 3258 3119 218 238 63 0 chr20 23737769 23737832 -48416050 + MIR SINE MIR 66 132 -76 280 174 0 72 chr20 23737843 23737912 -48415970 - L2 LINE L2 0 3272 3209 885 176 136 0 chr20 23738536 23738712 -48415170 - MER20 DNA MER1_type -18 201 2 417 286 135 5 chr20 23739249 23739441 -48414441 + MIR SINE MIR 20 236 -26 423 303 109 76 chr20 23740820 23741295 -48412587 + LTR67 LTR ERVL 55 545 -12 327 160 32 0 chr20 23741637 23741731 -48412151 + CT-rich Low_complexity Low_complexity 1 97 0 367 263 60 15 chr20 23741837 23741970 -48411912 + LTR33A LTR ERVL 382 520 -3 198 236 0 0 chr20 23742388 23742443 -48411439 + (CATA)n Simple_repeat Simple_repeat 2 56 0 437 158 33 0 chr20 23742529 23742649 -48411233 + (CTATA)n Simple_repeat Simple_repeat 2 125 0 195 220 0 0 chr20 23742670 23742720 -48411162 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 308 323 21 0 chr20 23742721 23742814 -48411068 + L1MC4 LINE L1 6615 6709 -1333 228 219 37 0 chr20 23742832 23742914 -48410968 + (TA)n Simple_repeat Simple_repeat 1 85 0 477 278 35 0 chr20 23743512 23743656 -48410226 - LTR16C LTR ERVL -32 459 311 1353 206 32 83 chr20 23744206 23744637 -48409245 + MER63B DNA MER1_type 20 428 -8 2234 113 3 0 chr20 23745598 23745890 -48407992 - AluSx SINE Alu -19 293 1 443 222 40 8 chr20 23745929 23746055 -48407827 + MER5B DNA MER1_type 47 176 -2 2252 89 0 14 chr20 23746167 23746458 -48407424 + AluSq SINE Alu 11 297 -16 371 273 123 79 chr20 23747163 23747197 -48406685 - LTR16C LTR ERVL -38 453 422 2346 125 30 22 chr20 23747197 23747558 -48406324 - THE1B LTR MaLR 0 364 1 371 273 123 79 chr20 23747558 23747889 -48405993 - LTR16C LTR ERVL -69 422 72 6265 18 0 0 chr20 23749796 23750511 -48403371 - L1PA2 LINE L1 -904 5242 4528 7858 12 10 0 chr20 23750511 23751395 -48402487 + L1PA2 LINE L1 5262 6155 0 325 258 11 0 chr20 23751584 23751677 -48402205 - MIR SINE MIR -68 194 101 2114 100 0 31 chr20 23752083 23752400 -48401482 + AluSq SINE Alu 1 308 0 2430 74 7 0 chr20 23752882 23753179 -48400703 - AluY SINE Alu -12 299 1 909 207 6 0 chr20 23753536 23753700 -48400182 - FRAM SINE Alu -13 163 1 3187 56 0 2 chr20 23753705 23754101 -48399781 - L1PA7 LINE L1 -6 6148 5754 496 219 38 38 chr20 23754269 23754429 -48399453 - L2 LINE L2 -1 3312 3153 454 163 12 0 chr20 23754472 23754558 -48399324 - MIR SINE MIR -95 167 81 19728 91 25 3 chr20 23754597 23757244 -48396638 - Charlie3 DNA MER1_type -4 2706 1 1182 266 114 50 chr20 23757267 23758020 -48395862 - L2 LINE L2 -158 3155 2338 2061 179 8 16 chr20 23758020 23758177 -48395705 + MLT1A1 LTR MaLR 1 158 -207 2838 0 0 10 chr20 23758177 23758481 -48395401 + AluYa5 SINE Alu 1 301 -10 2061 179 8 16 chr20 23758481 23758691 -48395191 + MLT1A1 LTR MaLR 158 365 0 1182 266 114 50 chr20 23758691 23758786 -48395096 - L2 LINE L2 -975 2338 2251 28 61 0 0 chr20 23759830 23759879 -48394003 + AT_rich Low_complexity Low_complexity 1 49 0 793 261 153 68 chr20 23759985 23760179 -48393703 + L2 LINE L2 1917 2093 -1220 1521 198 40 17 chr20 23760179 23760532 -48393350 - MLT1A1 LTR MaLR 0 365 5 793 261 153 68 chr20 23760532 23760883 -48392999 + L2 LINE L2 2093 2413 -900 378 0 0 0 chr20 23760883 23760925 -48392957 + (CA)n Simple_repeat Simple_repeat 1 42 0 793 261 153 68 chr20 23760925 23761676 -48392206 + L2 LINE L2 2413 3307 -6 2484 231 100 19 chr20 23761766 23762374 -48391508 + MER97a DNA MER1_type? 89 767 -127 2375 76 3 0 chr20 23762374 23762664 -48391218 + AluY SINE Alu 1 291 -20 2484 231 100 19 chr20 23762664 23762788 -48391094 + MER97a DNA MER1_type? 767 880 -14 431 233 16 23 chr20 23762798 23762927 -48390955 - MIR SINE MIR -93 169 42 379 202 67 11 chr20 23763105 23763194 -48390688 + L1ME3 LINE L1 5615 5708 -454 807 250 45 5 chr20 23763196 23763456 -48390426 + L1ME3 LINE L1 5881 6163 -7 299 257 14 0 chr20 23765604 23765678 -48388204 + L2 LINE L2 3234 3308 -5 235 105 0 0 chr20 23765754 23765799 -48388083 - HSMAR1 DNA Mariner -35 45 1 274 250 15 0 chr20 23766811 23766879 -48387003 - MLT1L LTR MaLR -545 70 2 354 215 43 11 chr20 23767096 23767189 -48386693 - MLT1L LTR MaLR -325 290 195 213 303 51 67 chr20 23768088 23768266 -48385616 - MIR SINE MIR -68 194 20 1728 295 81 5 chr20 23768796 23769399 -48384483 + ERVL LTR ERVL 4320 4968 -796 1022 277 69 35 chr20 23769555 23769591 -48384291 + LTR33 LTR ERVL 8 41 -480 1676 178 38 44 chr20 23769591 23769800 -48384082 - MLT1A1 LTR MaLR -2 363 155 2243 108 10 3 chr20 23769800 23770107 -48383775 - AluSc SINE Alu 0 309 1 1676 178 38 44 chr20 23770107 23770262 -48383620 - MLT1A1 LTR MaLR -210 155 1 1022 277 69 35 chr20 23770262 23770687 -48383195 + LTR33 LTR ERVL 41 485 -36 1626 198 73 23 chr20 23770860 23771214 -48382668 + MLT1A2 LTR MaLR 3 374 0 1384 186 110 52 chr20 23772154 23772499 -48381383 - MLT1A1 LTR MaLR 0 365 1 1807 185 70 0 chr20 23772570 23772884 -48380998 - MER1B DNA MER1_type -2 337 2 2373 113 29 69 chr20 23772986 23773365 -48380517 - THE1B LTR MaLR 0 364 1 12047 106 10 5 chr20 23773365 23774935 -48378947 - THE1B-int LTR MaLR 0 1580 3 1706 147 107 21 chr20 23774935 23775262 -48378620 - THE1B LTR MaLR -9 355 1 3085 156 80 12 chr20 23776058 23776636 -48377246 - L1MC2 LINE L1 -203 6141 5525 15229 148 53 11 chr20 23776648 23778402 -48375480 - L1PB1 LINE L1 0 6867 5188 207 0 0 0 chr20 23778402 23778425 -48375457 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 15229 148 53 11 chr20 23778425 23782650 -48371232 - L1PB1 LINE L1 -1679 5188 636 1175 151 5 0 chr20 23782658 23782850 -48371032 - L1PB1 LINE L1 -6668 195 3 3445 189 13 99 chr20 23782862 23784102 -48369780 - L1MC2 LINE L1 -743 5403 4381 222 91 30 0 chr20 23784942 23784975 -48368907 - MER5A DNA MER1_type 0 189 156 1384 115 0 0 chr20 23784985 23785176 -48368706 - AluY SINE Alu 0 311 121 955 81 40 0 chr20 23785215 23785339 -48368543 - AluY SINE Alu -182 129 1 579 222 104 0 chr20 23785344 23785479 -48368403 - MER5A DNA MER1_type -40 149 1 313 342 194 10 chr20 23786227 23786423 -48367459 - MIR SINE MIR -30 232 1 1418 263 79 25 chr20 23786584 23787101 -48366781 + MER90 LTR ERV1 31 575 0 2027 225 99 26 chr20 23788559 23789164 -48364718 - L1ME3A LINE L1 0 6170 5522 209 265 20 0 chr20 23789190 23789239 -48364643 + GA-rich Low_complexity Low_complexity 1 50 0 21 82 0 0 chr20 23790320 23790369 -48363513 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr20 23790566 23790590 -48363292 + AT_rich Low_complexity Low_complexity 1 24 0 1880 147 3 29 chr20 23790592 23790906 -48362976 + AluJo SINE Alu 1 306 -6 326 284 8 24 chr20 23791515 23791642 -48362240 + MLT2E LTR ERVL 478 602 -26 183 80 0 0 chr20 23792273 23792298 -48361584 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 349 308 92 48 chr20 23792338 23792588 -48361294 + Charlie7 DNA MER1_type 5 265 -2347 2136 127 26 52 chr20 23792613 23792998 -48360884 + THE1C LTR MaLR 1 375 0 628 199 82 7 chr20 23793003 23793149 -48360733 + MER105 DNA DNA 6 162 -42 3841 237 122 23 chr20 23793177 23794453 -48359429 + Charlie7 DNA MER1_type 689 2107 -505 1704 165 0 21 chr20 23794453 23794776 -48359106 + AluJb SINE Alu 5 321 0 3841 237 122 23 chr20 23794776 23794844 -48359038 + Charlie7 DNA MER1_type 2107 2167 -445 283 191 0 15 chr20 23794842 23794910 -48358972 + MER116 DNA Mariner 14 80 0 * 2011 139 3 10 chr20 23795259 23795560 -48358322 + AluJo SINE Alu 1 299 -13 710 219 53 0 chr20 23795909 23796060 -48357822 - L1 LINE L1 -1907 4239 4081 349 177 0 16 chr20 23796132 23796194 -48357688 - L1 LINE L1 -2069 4077 4017 228 207 198 52 chr20 23797278 23797394 -48356488 - L2 LINE L2 -10 3303 3171 735 226 44 0 chr20 23797721 23797902 -48355980 - MER5A DNA MER1_type 0 189 1 14134 204 65 28 chr20 23798293 23800704 -48353178 + L1MA9 LINE L1 1039 3358 -3914 1957 81 0 4 chr20 23800704 23800952 -48352930 - AluY SINE Alu -64 247 1 14134 204 65 28 chr20 23800952 23801175 -48352707 + L1MA9 LINE L1 3358 3571 -3701 1673 112 12 0 chr20 23801175 23801426 -48352456 + L1MA2 LINE L1 6051 6304 0 14134 204 65 28 chr20 23801426 23803447 -48350435 + L1MA9 LINE L1 3571 5713 -1559 1765 158 31 7 chr20 23803447 23803738 -48350144 + AluJo SINE Alu 1 298 -14 14134 204 65 28 chr20 23803738 23805359 -48348523 + L1MA9 LINE L1 5713 7272 0 1798 150 85 12 chr20 23805407 23805747 -48348135 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr20 23806960 23806983 -48346899 + AT_rich Low_complexity Low_complexity 1 23 0 976 249 142 30 chr20 23807836 23808209 -48345673 + L2 LINE L2 2899 3313 0 184 333 85 82 chr20 23808851 23809169 -48344713 + L2 LINE L2 2656 2974 -340 457 253 20 47 chr20 23809298 23809448 -48344434 + L2 LINE L2 3168 3313 0 217 275 38 61 chr20 23810054 23810185 -48343697 + L2 LINE L2 3186 3313 0 23 0 0 0 chr20 23811076 23811099 -48342783 + AT_rich Low_complexity Low_complexity 1 23 0 851 248 56 9 chr20 23811320 23811534 -48342348 - MER58A DNA MER1_type 0 224 1 532 284 36 5 chr20 23811718 23812076 -48341806 - L1ME2 LINE L1 -9 6155 5756 23 54 0 0 chr20 23813134 23813171 -48340711 + AT_rich Low_complexity Low_complexity 1 37 0 1235 290 44 5 chr20 23814203 23814589 -48339293 - LTR16C LTR ERVL -5 486 86 294 319 98 29 chr20 23814602 23814806 -48339076 + MIR SINE MIR 16 233 -29 1598 178 150 89 chr20 23817178 23817604 -48336278 + LTR47A LTR ERVL 1 452 0 332 211 37 41 chr20 23818150 23818355 -48335527 + LTR16C LTR ERVL 215 491 0 512 244 17 0 chr20 23819299 23819414 -48334468 - L1ME2 LINE L1 -9 6155 6039 812 183 0 8 chr20 23819414 23819540 -48334342 + FLAM_C SINE Alu 1 125 -18 488 228 18 0 chr20 23819599 23819713 -48334169 - L1MC4 LINE L1 -170 7872 7757 3139 204 98 31 chr20 23819753 23820568 -48333314 - L1MC4a LINE L1 -97 7711 6842 198 118 0 0 chr20 23821262 23821296 -48332586 + (CA)n Simple_repeat Simple_repeat 2 35 0 893 183 28 47 chr20 23822184 23822397 -48331485 - MER3 DNA MER1_type 0 209 1 771 166 26 57 chr20 23823976 23824169 -48329713 - MER5A DNA MER1_type -2 187 1 1928 166 3 0 chr20 23824627 23824923 -48328959 + AluJo SINE Alu 1 297 -15 309 335 66 26 chr20 23826845 23827072 -48326810 - MIR SINE MIR -9 253 18 409 276 42 36 chr20 23827736 23827913 -48325969 - L1ME2 LINE L1 -11 6153 5982 2565 54 0 3 chr20 23828255 23828553 -48325329 + AluY SINE Alu 1 297 -14 668 270 74 6 chr20 23829319 23829588 -48324294 + LTR16C LTR ERVL 89 431 -60 3002 194 32 15 chr20 23830158 23830757 -48323125 + L1MB5 LINE L1 5552 6160 -14 184 228 120 54 chr20 23830841 23830933 -48322949 - MIR3 SINE MIR -26 182 85 248 262 116 12 chr20 23831733 23831905 -48321977 + L1ME3A LINE L1 5111 5300 -846 1719 204 143 9 chr20 23831991 23832418 -48321464 - MLT1D LTR MaLR 0 505 22 1172 296 66 18 chr20 23832440 23832504 -48321378 + L1ME3A LINE L1 5406 5465 -705 225 0 0 0 chr20 23832504 23832529 -48321353 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1172 296 66 18 chr20 23832529 23832978 -48320904 + L1ME3A LINE L1 5465 5944 -226 262 233 0 35 chr20 23833160 23833246 -48320636 + L1MC5 LINE L1 7846 7928 -33 1217 229 30 52 chr20 23833339 23833705 -48320177 + Charlie4a DNA MER1_type 1 358 -150 876 195 18 59 chr20 23834524 23834745 -48319137 - L1ME LINE L1 -586 5580 5369 405 58 0 0 chr20 23834747 23834799 -48319083 + (CA)n Simple_repeat Simple_repeat 1 52 0 198 271 0 0 chr20 23834814 23834862 -48319020 - MIR SINE MIR -8 254 207 609 238 41 26 chr20 23834862 23835173 -48318709 - L1ME1 LINE L1 0 6184 5798 1926 231 68 2 chr20 23835202 23835674 -48318208 - L1ME1 LINE L1 -295 5871 5369 207 320 130 0 chr20 23835773 23835873 -48318009 + L2 LINE L2 3192 3304 -9 1657 152 5 127 chr20 23836160 23836554 -48317328 - MER7A DNA MER2_type 0 346 3 382 294 76 15 chr20 23836753 23836950 -48316932 + MIR SINE MIR 48 256 -6 683 236 73 94 chr20 23836978 23837444 -48316438 + LTR16A1 LTR ERVL 2 457 0 225 308 26 0 chr20 23838978 23839056 -48314826 + GA-rich Low_complexity Low_complexity 3 82 0 1114 289 110 33 chr20 23839579 23840033 -48313849 - LTR16C LTR ERVL -2 489 1 334 239 0 0 chr20 23840905 23840972 -48312910 + MER3 DNA MER1_type 3 69 -140 284 332 73 27 chr20 23841430 23841650 -48312232 - MIR SINE MIR -29 233 4 3161 163 40 11 chr20 23841834 23842433 -48311449 - L1MC3 LINE L1 -4 7781 5723 2519 61 5 84 chr20 23842535 23842929 -48310953 - L1PB1 LINE L1 -2 6149 5787 695 131 0 61 chr20 23842937 23843302 -48310580 + (TA)n Simple_repeat Simple_repeat 1 342 0 3888 70 21 2 chr20 23843304 23843832 -48310050 - L1PB1 LINE L1 -360 5791 5254 2145 247 131 3 chr20 23843835 23844500 -48309382 - L1ME1 LINE L1 -1359 4787 4038 1192 282 22 47 chr20 23844572 23844976 -48308906 + LTR16C LTR ERVL 97 490 -1 225 300 30 30 chr20 23845566 23845666 -48308216 + L2 LINE L2 2791 2890 -424 616 227 79 35 chr20 23845905 23846108 -48307774 - MIR SINE MIR -15 247 36 2502 71 3 3 chr20 23846284 23846592 -48307290 - AluY SINE Alu -2 309 2 290 256 29 51 chr20 23846768 23846905 -48306977 - L1ME4a LINE L1 -214 5907 5774 379 285 15 10 chr20 23847964 23848108 -48305774 - MER5A DNA MER1_type -5 184 31 413 246 44 9 chr20 23848202 23848316 -48305566 + MER5B DNA MER1_type 34 151 -27 2329 184 24 15 chr20 23848863 23849326 -48304556 - MLT1C LTR MaLR 0 467 1 369 289 111 31 chr20 23850529 23850754 -48303128 - MIR SINE MIR -2 260 18 657 232 119 54 chr20 23851311 23851748 -48302134 + MLT1H LTR MaLR 29 547 -2 2334 88 3 0 chr20 23851888 23852219 -48301663 - AluSp SINE Alu 0 332 1 1988 109 51 3 chr20 23852699 23852993 -48300889 + AluSx SINE Alu 1 308 -4 714 205 88 41 chr20 23853002 23853173 -48300709 - MER58A DNA MER1_type 0 224 46 357 280 9 19 chr20 23853387 23853494 -48300388 + MER117 DNA MER1_type 57 162 -35 584 209 190 12 chr20 23854211 23854374 -48299508 - MER3 DNA MER1_type -3 206 15 611 323 25 29 chr20 23854454 23854733 -48299149 + LTR16C LTR ERVL 88 365 -126 529 298 98 20 chr20 23855018 23855313 -48298569 + MARNA DNA Mariner 261 578 -8 381 170 28 38 chr20 23855335 23855441 -48298441 - L1MB8 LINE L1 0 6178 6074 396 55 0 0 chr20 23855704 23855759 -48298123 + (CA)n Simple_repeat Simple_repeat 1 55 0 684 308 101 15 chr20 23857102 23857662 -48296220 + L2 LINE L2 2631 3241 -72 452 262 7 7 chr20 23857768 23857909 -48295973 - L1MC4 LINE L1 -10 8032 7892 335 146 10 31 chr20 23857919 23858015 -48295867 + (TCTA)n Simple_repeat Simple_repeat 3 96 0 2167 244 124 41 chr20 23858034 23858930 -48294952 - L1MC4 LINE L1 -132 7910 6941 1351 277 146 38 chr20 23860128 23861592 -48292290 + L2 LINE L2 1681 3312 -1 24 53 0 0 chr20 23862309 23862347 -48291535 + AT_rich Low_complexity Low_complexity 1 38 0 1594 171 4 21 chr20 23862534 23862814 -48291068 + AluJb SINE Alu 36 310 -2 463 279 101 4 chr20 23862845 23863017 -48290865 + LTR33 LTR ERVL 3 216 -305 343 267 97 12 chr20 23863064 23863229 -48290653 + LTR33 LTR ERVL 334 512 -9 1547 139 43 18 chr20 23863284 23863537 -48290345 + MER46B DNA MER2_type 1 138 -2593 420 20 0 0 chr20 23863537 23863586 -48290296 + (TC)n Simple_repeat Simple_repeat 2 50 0 1547 139 43 18 chr20 23863586 23863612 -48290270 + MER46B DNA MER2_type 138 162 -74 253 130 0 0 chr20 23863592 23863638 -48290244 - LTR66 LTR ERVL -171 439 394 * 420 111 0 157 chr20 23863657 23863765 -48290117 + MER46B DNA MER2_type 146 236 0 1513 180 53 7 chr20 23863920 23864084 -48289798 - AluJo SINE Alu -15 297 113 264 30 0 0 chr20 23864084 23864117 -48289765 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1513 180 53 7 chr20 23864117 23864236 -48289646 - AluJo SINE Alu -199 113 1 233 344 48 0 chr20 23865309 23865434 -48288448 - MIR SINE MIR -9 253 123 22 35 0 0 chr20 23865888 23865917 -48287965 + AT_rich Low_complexity Low_complexity 1 29 0 2848 19 0 0 chr20 23866146 23866457 -48287425 - AluY SINE Alu 0 311 1 945 238 220 34 chr20 23866865 23866952 -48286930 + L1MC4 LINE L1 6949 7018 -1024 674 24 0 12 chr20 23866952 23867037 -48286845 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 945 238 220 34 chr20 23867037 23867507 -48286375 + L1MC4 LINE L1 7018 7610 -432 435 203 28 70 chr20 23868120 23868263 -48285619 + L1MC4 LINE L1 7768 7904 -138 180 77 0 0 chr20 23868266 23868292 -48285590 + (TA)n Simple_repeat Simple_repeat 1 26 0 225 212 0 106 chr20 23868300 23868366 -48285516 - MER2 DNA MER2_type 0 345 287 209 243 14 0 chr20 23868374 23868444 -48285438 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 1464 181 148 13 chr20 23868457 23868760 -48285122 - MER2 DNA MER2_type 0 344 1 1582 240 99 5 chr20 23871057 23871503 -48282379 - LTR16C LTR ERVL 0 491 4 1963 148 0 3 chr20 23872067 23872385 -48281497 - L1P LINE L1 -1011 5135 4819 1341 66 0 28 chr20 23872385 23872561 -48281321 + L1PA11 LINE L1 5998 6173 -1 1760 195 13 81 chr20 23873141 23873588 -48280294 + MER47B DNA MER2_type 1 417 -1 1787 151 0 3 chr20 23874767 23875119 -48278763 + AluJb SINE Alu 1 351 0 2067 121 7 0 chr20 23876047 23876353 -48277529 + AluSx SINE Alu 1 308 -4 227 234 48 130 chr20 23877751 23877982 -48275900 + L2 LINE L2 3019 3230 -42 580 97 0 52 chr20 23878264 23878398 -48275484 + (GGAA)n Simple_repeat Simple_repeat 3 129 0 259 273 13 0 chr20 23879076 23879153 -48274729 - MER5A DNA MER1_type -103 86 9 590 207 88 26 chr20 23879796 23879970 -48273912 - MER5A DNA MER1_type 0 189 4 321 377 42 19 chr20 23879982 23880194 -48273688 - MIR SINE MIR -31 231 15 2386 69 0 0 chr20 23881601 23881905 -48271977 - L1PA8 LINE L1 -2 6170 5867 238 293 32 49 chr20 23881996 23882119 -48271763 - MIR3 SINE MIR -5 203 83 * 298 289 58 41 chr20 23882095 23882216 -48271666 - MIR SINE MIR -12 250 128 205 301 54 11 chr20 23882345 23882438 -48271444 - L2 LINE L2 -2889 425 329 243 0 0 0 chr20 23882483 23882510 -48271372 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5631 151 48 1 chr20 23882510 23883817 -48270065 - L1PA16 LINE L1 -3 6163 4790 400 271 35 14 chr20 23884825 23884969 -48268913 - MER69A DNA AcHobo -2 175 29 269 257 79 10 chr20 23884990 23885091 -48268791 - MIR SINE MIR -95 167 60 4130 103 8 5 chr20 23885779 23886378 -48267504 + L1PA15 LINE L1 5563 6163 -2 269 281 11 0 chr20 23886514 23886603 -48267279 + L1ME2 LINE L1 5728 5817 -345 291 252 25 67 chr20 23887040 23887159 -48266723 - L2 LINE L2 -1 3312 3199 507 318 133 52 chr20 23887605 23888011 -48265871 + L3 LINE CR1 1134 1572 -5 797 275 203 15 chr20 23888789 23889266 -48264616 - MLT1F1 LTR MaLR 0 567 1 393 22 0 0 chr20 23890158 23890204 -48263678 + (CA)n Simple_repeat Simple_repeat 2 47 0 1445 213 22 0 chr20 23890341 23890614 -48263268 + LTR16C LTR ERVL 61 339 -152 185 156 0 22 chr20 23890722 23890767 -48263115 + T-rich Low_complexity Low_complexity 2 45 0 622 175 8 24 chr20 23890771 23890897 -48262985 + LTR16C LTR ERVL 353 476 -15 228 250 0 16 chr20 23891722 23891786 -48262096 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 996 199 74 30 chr20 23891798 23892095 -48261787 + L1ME2 LINE L1 5834 6143 -21 373 222 42 0 chr20 23892394 23892466 -48261416 - MER2 DNA MER2_type 0 345 271 2394 160 10 0 chr20 23892467 23892860 -48261022 - L1P LINE L1 -3340 2806 2410 8233 126 15 5 chr20 23892864 23894168 -48259714 + L1PA10 LINE L1 2983 4299 -1847 6073 91 26 31 chr20 23894175 23895089 -48258793 + L1PA10 LINE L1 5254 6163 -5 1151 119 0 40 chr20 23895325 23895501 -48258381 - MER2 DNA MER2_type -176 169 1 2198 106 3 0 chr20 23895706 23896008 -48257874 - AluSq SINE Alu -10 303 1 1751 196 28 22 chr20 23896293 23896656 -48257226 + MLT1A1 LTR MaLR 1 365 0 251 310 0 0 chr20 23897222 23897293 -48256589 - MIR SINE MIR -112 150 80 2062 189 0 11 chr20 23898697 23899056 -48254826 - MLT1A1 LTR MaLR -9 356 2 371 224 103 17 chr20 23899061 23899172 -48254710 - MER5B DNA MER1_type -39 139 19 667 259 0 0 chr20 23899172 23899334 -48254548 - MER5A DNA MER1_type 0 189 28 293 296 37 37 chr20 23899412 23899547 -48254335 + MIR3 SINE MIR 11 145 -63 1016 207 18 9 chr20 23900378 23900600 -48253282 - MER58A DNA MER1_type 0 224 1 426 303 122 27 chr20 23901357 23901578 -48252304 - MIR SINE MIR -1 261 20 986 261 141 20 chr20 23901918 23902316 -48251566 + MLT1J2 LTR MaLR 1 446 -4 761 164 7 0 chr20 23902559 23902699 -48251183 + Charlie5 DNA MER1_type 2444 2584 -28 208 269 71 56 chr20 23902754 23902912 -48250970 + MIR SINE MIR 43 194 -14 2059 131 0 0 chr20 23903879 23904184 -48249698 - AluJb SINE Alu -5 307 3 247 262 16 0 chr20 23904313 23904374 -48249508 + GA-rich Low_complexity Low_complexity 4 65 0 188 304 104 16 chr20 23905584 23905709 -48248173 - MIR SINE MIR -48 214 79 577 226 97 7 chr20 23905848 23906003 -48247879 + MER3 DNA MER1_type 6 127 -82 195 69 0 0 chr20 23907057 23907086 -48246796 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 718 260 73 0 chr20 23907443 23907635 -48246247 + MER58C DNA MER1_type 8 213 -2 957 248 11 49 chr20 23908566 23908727 -48245155 + LTR16C LTR ERVL 236 385 -106 848 234 24 19 chr20 23908727 23908932 -48244950 + MER63A DNA MER1_type 1 206 -4 957 248 11 49 chr20 23908932 23909036 -48244846 + LTR16C LTR ERVL 385 491 0 243 338 35 15 chr20 23909773 23909971 -48243911 - L2 LINE L2 -1216 2098 1897 231 297 31 0 chr20 23910316 23910380 -48243502 + L2 LINE L2 3198 3263 -9 1128 313 81 7 chr20 23910921 23911330 -48242552 - LTR16C LTR ERVL 0 491 53 646 278 98 24 chr20 23912032 23912237 -48241645 - MIR SINE MIR -12 250 31 1709 163 92 21 chr20 23912407 23912469 -48241413 + MER7A DNA MER2_type 1 57 -2981 1725 155 38 0 chr20 23912469 23912759 -48241123 - AluJo SINE Alu -11 301 1 1709 163 92 21 chr20 23912759 23913021 -48240861 + MER7A DNA MER2_type 57 346 0 183 182 0 0 chr20 23916409 23916442 -48237440 + L2 LINE L2 3030 3062 -210 180 250 28 0 chr20 23916755 23916791 -48237091 - MIR SINE MIR -131 77 41 412 164 0 0 chr20 23916824 23916891 -48236991 + MER5A DNA MER1_type 4 70 -119 5490 87 17 1 chr20 23917398 23918146 -48235736 - L1PB1 LINE L1 -2 6149 5390 206 184 35 11 chr20 23918532 23918619 -48235263 + CT-rich Low_complexity Low_complexity 1 89 0 1154 193 138 55 chr20 23918672 23918999 -48234883 + MLT1A1 LTR MaLR 12 365 0 428 221 21 0 chr20 23919059 23919154 -48234728 - MER5A DNA MER1_type -84 105 9 880 209 39 0 chr20 23920120 23920302 -48233580 + MER3 DNA MER1_type 3 191 -18 297 306 104 28 chr20 23920770 23920914 -48232968 + MIR3 SINE MIR 47 201 -7 391 291 75 69 chr20 23920989 23921309 -48232573 + Charlie7 DNA MER1_type 35 356 -2256 2049 219 45 105 chr20 23921323 23922370 -48231512 + Charlie7 DNA MER1_type 1494 2477 -135 426 202 71 20 chr20 23922378 23922477 -48231405 - MER69 DNA AcHobo -2 2524 2421 190 314 215 16 chr20 23923149 23923270 -48230612 + L2 LINE L2 3149 3293 -20 225 302 16 0 chr20 23923487 23923550 -48230332 + MLT1K LTR MaLR 184 247 -341 477 236 51 82 chr20 23923609 23923804 -48230078 + MLT1K LTR MaLR 366 554 -34 615 306 45 4 chr20 23924312 23924554 -48229328 - LTR16C LTR ERVL 0 491 240 2129 91 0 14 chr20 23924625 23924910 -48228972 - AluSx SINE Alu -2 310 30 358 100 33 0 chr20 23925205 23925265 -48228617 - AluJb SINE Alu -2 300 239 675 179 152 20 chr20 23925274 23925425 -48228457 - AluJb SINE Alu -140 172 2 351 0 0 0 chr20 23926309 23926348 -48227534 + (CA)n Simple_repeat Simple_repeat 2 40 0 618 252 93 71 chr20 23926730 23926951 -48226931 + MLT1L LTR MaLR 101 337 -278 2767 13 0 7 chr20 23926951 23927260 -48226622 - AluY SINE Alu -4 307 1 618 252 93 71 chr20 23927260 23927447 -48226435 + MLT1L LTR MaLR 337 518 -97 1681 162 13 44 chr20 23927733 23928048 -48225834 + AluJo SINE Alu 1 305 -7 291 288 39 65 chr20 23928986 23929139 -48224743 - MIR SINE MIR -36 226 78 2146 113 7 0 chr20 23930663 23930954 -48222928 - AluSg SINE Alu -13 297 5 869 214 0 12 chr20 23931390 23931558 -48222324 + FRAM SINE Alu 1 166 0 858 134 43 0 chr20 23932385 23932549 -48221333 - MER33 DNA MER1_type -4 320 150 2211 137 0 0 chr20 23932588 23932895 -48220987 - AluJb SINE Alu -5 307 1 1862 153 18 21 chr20 23932897 23933236 -48220646 - L1MB8 LINE L1 -33 6145 5808 1806 158 3 14 chr20 23933252 23933568 -48220314 - AluJo SINE Alu 0 313 1 754 200 39 0 chr20 23933569 23933724 -48220158 - MER33 DNA MER1_type -163 161 1 229 209 105 92 chr20 23933724 23933877 -48220005 - MIR3 SINE MIR -48 160 6 768 246 22 0 chr20 23934398 23934581 -48219301 - MIR SINE MIR -74 188 2 381 141 31 0 chr20 23935287 23935351 -48218531 + Charlie8 DNA MER1_type 118 183 -2234 814 255 84 21 chr20 23937690 23937976 -48215906 + LTR16C LTR ERVL 188 491 0 404 307 34 17 chr20 23938415 23938591 -48215291 + MIR SINE MIR 54 232 -30 3027 192 125 15 chr20 23939496 23940215 -48213667 + Tigger6a DNA MER2_type 72 869 -214 615 190 8 0 chr20 23940216 23940337 -48213545 - L1MA7 LINE L1 -11 6280 6159 3298 155 23 0 chr20 23940338 23940867 -48213015 - L1MA7 LINE L1 -241 6050 5510 810 224 28 0 chr20 23940868 23941082 -48212800 + Tigger6a DNA MER2_type 844 1063 -20 213 94 0 0 chr20 23941234 23941266 -48212616 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 237 299 9 28 chr20 23941396 23941503 -48212379 - MIR SINE MIR -88 174 70 844 199 105 22 chr20 23941542 23941809 -48212073 - MER33 DNA MER1_type -19 305 17 276 323 85 5 chr20 23942282 23942505 -48211377 - L1MEd LINE L1 -1908 4221 3981 380 151 57 9 chr20 23942535 23942641 -48211241 + (CAGAGA)n Simple_repeat Simple_repeat 4 114 0 395 270 51 51 chr20 23942929 23943166 -48210716 - L1MEd LINE L1 -2875 3254 3018 648 241 60 99 chr20 23943270 23943805 -48210077 - L1MEd LINE L1 -3384 2745 2232 28 61 0 0 chr20 23943983 23944032 -48209850 + AT_rich Low_complexity Low_complexity 1 49 0 1114 297 91 40 chr20 23944064 23944637 -48209245 - L1MEd LINE L1 -5492 627 26 1872 172 82 0 chr20 23946415 23946804 -48207078 + LTR37A LTR ERV1 5 425 -1 543 240 101 40 chr20 23948436 23948732 -48205150 + LTR16A1 LTR ERVL 55 368 -89 25 0 0 0 chr20 23950243 23950268 -48203614 + AT_rich Low_complexity Low_complexity 1 25 0 210 171 0 0 chr20 23950392 23950433 -48203449 + (TG)n Simple_repeat Simple_repeat 1 41 0 1122 248 138 28 chr20 23950817 23951369 -48202513 + L1ME3A LINE L1 5552 6170 0 1864 163 0 13 chr20 23952596 23952902 -48200980 - AluJo SINE Alu 0 312 11 250 313 0 0 chr20 23954125 23954189 -48199693 - MER91A DNA MER1_type -23 173 110 567 218 26 57 chr20 23955019 23955212 -48198670 - MER5A DNA MER1_type 0 189 3 258 306 157 8 chr20 23955469 23955603 -48198279 - MIR3 SINE MIR -40 168 15 374 252 39 39 chr20 23957382 23957509 -48196373 - L2 LINE L2 -56 3257 3131 2204 189 43 32 chr20 23957631 23958124 -48195758 - MLT1D LTR MaLR -7 498 1 326 314 107 27 chr20 23960301 23960629 -48193253 + L1M4 LINE L1 3467 3820 -2326 356 314 63 0 chr20 23960685 23960860 -48193022 - L1ME4a LINE L1 -215 5906 5721 331 278 11 0 chr20 23961464 23961554 -48192328 + L2 LINE L2 3182 3272 0 390 205 112 77 chr20 23961655 23961771 -48192111 + L1ME4a LINE L1 5602 5712 -409 2276 117 0 0 chr20 23961771 23962070 -48191812 + AluSx SINE Alu 1 299 -13 390 205 112 77 chr20 23962070 23962316 -48191566 + L1ME4a LINE L1 5712 6119 -2 381 43 0 0 chr20 23964232 23964279 -48189603 + (CA)n Simple_repeat Simple_repeat 1 47 0 414 187 57 41 chr20 23966182 23966305 -48187577 + L2 LINE L2 3189 3313 0 375 293 63 23 chr20 23966651 23966825 -48187057 + L2 LINE L2 2872 3052 -220 386 191 7 21 chr20 23967046 23967144 -48186738 - LTR54 LTR ERV1 -21 477 384 820 267 0 5 chr20 23967414 23967624 -48186258 - MER3 DNA MER1_type 0 209 1 1465 238 67 26 chr20 23968404 23968790 -48185092 - LTR16C LTR ERVL 0 491 90 241 306 12 12 chr20 23968891 23968976 -48184906 + MIR3 SINE MIR 90 174 -34 240 222 56 14 chr20 23969374 23969446 -48184436 - MIR SINE MIR -24 238 164 4193 232 45 17 chr20 23969506 23970607 -48183275 + L1ME4a LINE L1 43 1174 -5222 3109 226 100 29 chr20 23970605 23971665 -48182217 + L1ME4a LINE L1 2609 3743 -2472 * 2021 215 43 38 chr20 23971671 23972257 -48181625 + L1ME4a LINE L1 4107 4695 -1520 273 57 0 0 chr20 23972793 23972828 -48181054 + (A)n Simple_repeat Simple_repeat 1 35 0 1226 206 39 0 chr20 23973878 23974191 -48179691 + MER33 DNA MER1_type 1 314 -10 276 329 28 44 chr20 23974550 23974799 -48179083 + L2 LINE L2 2814 3058 -214 4819 200 25 13 chr20 23975098 23976977 -48176905 - L1MB2 LINE L1 0 6171 4269 380 253 67 17 chr20 23977027 23977205 -48176677 + L1ME4a LINE L1 5935 6121 0 315 152 136 0 chr20 23977826 23977892 -48175990 + L2 LINE L2 3219 3293 -20 502 224 12 16 chr20 23979573 23979825 -48174057 + GA-rich Low_complexity Low_complexity 1 250 0 810 297 97 31 chr20 23980987 23981911 -48171971 + L1ME4a LINE L1 5199 6190 0 387 151 41 0 chr20 23982758 23982831 -48171051 + L1MA10 LINE L1 6259 6334 0 382 267 30 22 chr20 23983115 23983250 -48170632 + MIR SINE MIR 4 139 -123 424 302 30 91 chr20 23983260 23983525 -48170357 - MIR SINE MIR 0 262 14 299 267 11 11 chr20 23983589 23983679 -48170203 + LTR67 LTR ERVL 466 555 -2 342 326 75 65 chr20 23983951 23984338 -48169544 - L2 LINE L2 -23 3249 2859 2669 269 58 62 chr20 23984463 23985851 -48168031 + HAL1 LINE L1 2 1384 -1123 31 0 0 0 chr20 23985851 23985882 -48168000 + AT_rich Low_complexity Low_complexity 1 31 0 2111 202 35 79 chr20 23985882 23986502 -48167380 + L1MC5 LINE L1 6709 7301 -660 6515 11 0 0 chr20 23987007 23987726 -48166156 - L1HS LINE L1 0 6155 5437 * 7449 20 0 23 chr20 23987717 23988654 -48165228 + L1P LINE L1 4511 5421 -734 441 289 224 23 chr20 23988712 23988767 -48165115 - LTR16C LTR ERVL -63 428 385 1761 160 47 32 chr20 23988767 23989105 -48164777 - MER61A LTR ERV1 0 343 1 441 289 224 23 chr20 23989105 23989312 -48164570 - LTR16C LTR ERVL -106 385 113 183 313 24 12 chr20 23989371 23989454 -48164428 - MIR SINE MIR -175 87 4 685 198 19 19 chr20 23989734 23989896 -48163986 - MER5B DNA MER1_type 0 178 17 1818 246 163 77 chr20 23991400 23991587 -48162295 - L1MC4 LINE L1 0 8042 7873 1848 95 6 143 chr20 23991587 23991945 -48161937 + AluSg1 SINE Alu 1 309 0 1818 246 163 77 chr20 23991945 23992202 -48161680 - L1MC4 LINE L1 -169 7873 7640 2430 92 0 0 chr20 23992202 23992495 -48161387 + AluSg SINE Alu 1 293 -17 1818 246 163 77 chr20 23992495 23993380 -48160502 - L1MC4 LINE L1 -402 7640 6500 316 283 205 49 chr20 23993389 23993696 -48160186 - L1MC4a LINE L1 -1341 6467 6113 * 714 271 108 5 chr20 23993688 23993902 -48159980 - L1MC4a LINE L1 -2024 5784 5549 183 368 16 8 chr20 23993923 23994048 -48159834 - L2 LINE L2 -639 2675 2550 423 217 0 0 chr20 23994211 23994317 -48159565 + (TG)n Simple_repeat Simple_repeat 1 106 0 315 315 18 9 chr20 23997564 23997675 -48156207 + GA-rich Low_complexity Low_complexity 3 114 0 226 345 0 0 chr20 23997840 23997924 -48155958 + (CA)n Simple_repeat Simple_repeat 1 84 0 198 301 0 0 chr20 23997936 23998059 -48155823 + (CA)n Simple_repeat Simple_repeat 1 123 0 352 267 51 37 chr20 23998392 23998609 -48155273 - LTR16B LTR ERVL -12 452 233 232 91 0 0 chr20 23998638 23998671 -48155211 - LTR16B LTR ERVL -308 156 124 195 264 132 33 chr20 23999038 23999159 -48154723 + L3b LINE CR1 1332 1464 -119 219 78 59 0 chr20 23999437 23999488 -48154394 + (TA)n Simple_repeat Simple_repeat 1 54 0 941 56 87 0 chr20 24000062 24000188 -48153694 - MER85 DNA T2_type -2 137 1 347 137 0 0 chr20 24000842 24000893 -48152989 - MER74A LTR ERVL -30 528 478 791 153 35 7 chr20 24000895 24001039 -48152843 - LTR56 LTR ERV1 -297 148 1 * 1230 197 27 23 chr20 24001039 24001295 -48152587 - MER74A LTR ERVL -301 257 1 332 329 53 7 chr20 24002308 24002460 -48151422 + MIR SINE MIR 9 167 -95 308 318 73 0 chr20 24003239 24003349 -48150533 - MIR SINE MIR 0 262 145 1948 123 70 25 chr20 24004342 24004701 -48149181 + THE1C LTR MaLR 1 375 0 198 0 0 0 chr20 24007825 24007847 -48146035 + (T)n Simple_repeat Simple_repeat 1 22 0 198 370 11 0 chr20 24008373 24008489 -48145393 + MIR SINE MIR 53 135 -73 5779 224 41 66 chr20 24008685 24012050 -48141832 - L1MC2 LINE L1 -8 6336 3067 261 0 0 0 chr20 24012050 24012079 -48141803 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5779 224 41 66 chr20 24012079 24012226 -48141656 - L1MC2 LINE L1 -3277 3067 2918 805 226 77 10 chr20 24012597 24012805 -48141077 - LTR16C LTR ERVL 0 491 270 211 235 15 44 chr20 24013147 24013215 -48140667 - MIR SINE MIR -70 192 127 246 241 0 0 chr20 24013862 24013916 -48139966 + MIR SINE MIR 61 114 -94 242 267 0 0 chr20 24014148 24014208 -48139674 + L3 LINE CR1 655 714 -863 430 283 94 28 chr20 24014237 24014449 -48139433 + MIR SINE MIR 20 245 -17 183 80 0 0 chr20 24014743 24014768 -48139114 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 222 313 23 31 chr20 24015904 24016032 -48137850 + MIR SINE MIR 123 249 -13 2149 136 0 3 chr20 24017896 24018197 -48135685 + AluSx SINE Alu 1 300 -12 553 209 54 8 chr20 24018214 24018343 -48135539 + L1ME3A LINE L1 6027 6161 -9 412 255 0 10 chr20 24018400 24018502 -48135380 - MER91A DNA MER1_type -88 108 8 441 0 0 0 chr20 24019556 24019605 -48134277 + (TG)n Simple_repeat Simple_repeat 2 50 0 1395 133 9 156 chr20 24019910 24020083 -48133799 + AluJo SINE Alu 1 104 -208 2142 94 4 0 chr20 24020083 24020380 -48133502 + AluSg1 SINE Alu 3 300 0 1395 133 9 156 chr20 24020380 24020543 -48133339 + AluJo SINE Alu 104 289 -23 693 304 82 63 chr20 24021483 24022035 -48131847 + L3 LINE CR1 334 895 -682 294 232 0 0 chr20 24022258 24022314 -48131568 - MLT1L LTR MaLR -407 208 153 733 326 128 11 chr20 24022649 24023008 -48130874 + LTR16C LTR ERVL 89 489 -2 2047 138 19 41 chr20 24023422 24023784 -48130098 + THE1A LTR MaLR 2 355 0 330 355 74 0 chr20 24024422 24024543 -48129339 + MIR3 SINE MIR 42 171 -37 1954 141 90 15 chr20 24025534 24025924 -48127958 - L1MB3 LINE L1 0 6183 5765 479 211 162 21 chr20 24027067 24027209 -48126673 - MER5A DNA MER1_type -7 182 21 517 226 0 131 chr20 24027229 24027428 -48126454 + MER96 DNA MER1_type? 3 175 0 262 261 68 34 chr20 24027748 24027836 -48126046 - MIR SINE MIR -171 91 1 219 114 0 0 chr20 24028528 24028563 -48125319 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 227 241 96 12 chr20 24028566 24028649 -48125233 - L1MC4 LINE L1 -1339 6703 6614 381 272 108 89 chr20 24028651 24028700 -48125182 - MIR SINE MIR -17 245 198 2195 122 0 0 chr20 24028700 24029012 -48124870 - AluSx SINE Alu 0 312 1 381 272 108 89 chr20 24029012 24029175 -48124707 - MIR SINE MIR -64 198 29 399 152 8 149 chr20 24029183 24029318 -48124564 - L1PA15 LINE L1 0 6165 6050 399 250 19 19 chr20 24029327 24029435 -48124447 - MER5A DNA MER1_type 0 189 82 1040 72 78 0 chr20 24029450 24029603 -48124279 - AluY SINE Alu -14 297 133 262 176 15 59 chr20 24029605 24029673 -48124209 - MER5A DNA MER1_type -124 65 1 374 361 143 16 chr20 24030239 24030483 -48123399 - L1ME4a LINE L1 -227 5894 5620 195 250 0 0 chr20 24031543 24031595 -48122287 + (CA)n Simple_repeat Simple_repeat 1 52 0 206 253 0 0 chr20 24031938 24031994 -48121888 - MIR SINE MIR -114 148 94 1027 224 5 10 chr20 24032104 24032309 -48121573 + MER3 DNA MER1_type 1 204 -5 287 164 0 36 chr20 24032272 24032327 -48121555 - MER3 DNA MER1_type -120 89 37 * 23 0 0 0 chr20 24032559 24032582 -48121300 + AT_rich Low_complexity Low_complexity 1 23 0 537 259 47 29 chr20 24032980 24033150 -48120732 + MER5B DNA MER1_type 3 175 -3 421 250 107 36 chr20 24034043 24034239 -48119643 - L2 LINE L2 0 3313 3104 2395 296 188 34 chr20 24034249 24034778 -48119104 - L2 LINE L2 -576 2738 2292 2124 117 0 0 chr20 24034778 24035076 -48118806 + AluSx SINE Alu 1 298 -14 2395 296 188 34 chr20 24035076 24036508 -48117374 - L2 LINE L2 -1022 2292 474 348 347 71 6 chr20 24036748 24036918 -48116964 + MIR3 SINE MIR 22 202 -6 239 293 0 0 chr20 24037744 24037802 -48116080 + (CA)n Simple_repeat Simple_repeat 1 58 0 255 321 69 61 chr20 24040700 24040831 -48113051 - MIR SINE MIR -110 152 21 281 306 41 16 chr20 24041604 24041725 -48112157 + L1MC4a LINE L1 3742 3865 -2281 1627 165 53 28 chr20 24041796 24042117 -48111765 - L1MA7 LINE L1 -25 6266 5938 2325 70 0 3 chr20 24042236 24042534 -48111348 + AluY SINE Alu 1 297 -14 496 339 66 18 chr20 24042605 24042879 -48111003 + L1MC4a LINE L1 4177 4463 -1683 1195 224 18 4 chr20 24043551 24043832 -48110050 + L1MC4a LINE L1 5003 5287 -859 212 306 82 20 chr20 24045994 24046092 -48107790 + L2 LINE L2 3168 3271 -1 935 231 137 19 chr20 24046653 24046960 -48106922 - LTR16C LTR ERVL 0 491 149 261 335 68 6 chr20 24047128 24047289 -48106593 + MIR SINE MIR 90 260 -2 266 277 117 36 chr20 24047375 24047512 -48106370 + MIR3 SINE MIR 16 163 -45 218 287 69 23 chr20 24048264 24048351 -48105531 - L2 LINE L2 -45 3227 3137 498 296 151 15 chr20 24048448 24048654 -48105228 - MIR SINE MIR 0 262 29 262 340 21 43 chr20 24049013 24049154 -48104728 + L2 LINE L2 2252 2389 -925 295 296 133 48 chr20 24049162 24049561 -48104321 + L2 LINE L2 2545 2977 -337 294 282 13 0 chr20 24049739 24049817 -48104065 + L2 LINE L2 3235 3313 0 2787 178 31 28 chr20 24051112 24051301 -48102581 + L1MB2 LINE L1 5593 5780 -391 2267 143 8 0 chr20 24051301 24051657 -48102225 - MER46B DNA MER2_type -2 234 1 2787 178 31 28 chr20 24051657 24052041 -48101841 + L1MB2 LINE L1 5780 6168 -3 768 301 92 29 chr20 24052094 24052613 -48101269 + L1MC4a LINE L1 5384 5935 -1873 384 245 8 32 chr20 24053504 24053631 -48100251 + L1ME1 LINE L1 6033 6156 -22 279 329 185 14 chr20 24054140 24054286 -48099596 + MIR SINE MIR 14 184 -78 1646 133 42 9 chr20 24055820 24056165 -48097717 - Tigger4(Zombi) DNA MER2_type 0 2731 1 348 274 98 20 chr20 24058896 24059100 -48094782 - LTR16C LTR ERVL -79 412 193 503 364 32 8 chr20 24059419 24059672 -48094210 + MIR SINE MIR 2 260 -2 24 0 0 0 chr20 24059939 24059963 -48093919 + AT_rich Low_complexity Low_complexity 1 24 0 918 254 163 10 chr20 24062050 24062443 -48091439 - LTR16A1 LTR ERVL 0 457 5 287 328 46 6 chr20 24063757 24063931 -48089951 - LTR16C LTR ERVL -4 487 307 3779 124 8 2 chr20 24065044 24065568 -48088314 + MER1A DNA MER1_type 1 527 -2 845 245 115 68 chr20 24065854 24066418 -48087464 + MLT1H1 LTR MaLR 2 546 -9 710 224 45 45 chr20 24066429 24066652 -48087230 - MLT1A1 LTR MaLR 0 365 143 383 252 39 4 chr20 24066645 24066766 -48087116 - FLAM_A SINE Alu -11 122 1 * 733 147 124 8 chr20 24066771 24066900 -48086982 - MLT1A1 LTR MaLR -217 148 5 289 137 20 59 chr20 24066945 24067047 -48086835 + (CATA)n Simple_repeat Simple_repeat 2 99 0 627 284 53 47 chr20 24069206 24069586 -48084296 + L1ME LINE L1 112 493 -5577 326 245 32 0 chr20 24069817 24069911 -48083971 + L1ME LINE L1 531 627 -5443 1628 158 44 30 chr20 24069928 24070226 -48083656 + AluJo SINE Alu 1 302 -10 21 36 0 0 chr20 24071579 24071607 -48082275 + AT_rich Low_complexity Low_complexity 1 28 0 1279 258 69 36 chr20 24072640 24073032 -48080850 - LTR16C LTR ERVL -2 489 85 516 303 11 32 chr20 24073171 24073356 -48080526 - MIR SINE MIR -46 216 36 455 268 54 36 chr20 24073677 24073845 -48080037 + MIR SINE MIR 37 207 -55 287 320 62 8 chr20 24074335 24074463 -48079419 - L2 LINE L2 -1 3271 3137 782 278 60 47 chr20 24074552 24074937 -48078945 - MLT1I LTR MaLR -17 392 3 219 278 70 61 chr20 24076253 24076368 -48077514 - MIR SINE MIR -30 232 117 275 239 71 80 chr20 24076992 24077105 -48076777 - MIR SINE MIR -65 143 32 1456 229 30 30 chr20 24077676 24078043 -48075839 + MLT1A2 LTR MaLR 1 367 -7 554 277 30 20 chr20 24078089 24078442 -48075440 + LTR16C LTR ERVL 87 491 0 2659 47 0 0 chr20 24078508 24078806 -48075076 - AluY SINE Alu -13 298 1 232 273 30 30 chr20 24079753 24079852 -48074030 + MIR SINE MIR 34 132 -130 428 321 109 0 chr20 24080464 24080657 -48073225 + MIR SINE MIR 48 261 -1 950 180 47 13 chr20 24080930 24081075 -48072807 - L1MA9 LINE L1 -7 6305 6148 192 40 0 0 chr20 24081075 24081100 -48072782 + (TG)n Simple_repeat Simple_repeat 2 26 0 950 180 47 13 chr20 24081100 24081187 -48072695 - L1MA9 LINE L1 -164 6148 6065 521 289 20 29 chr20 24081357 24081561 -48072321 + LTR16C LTR ERVL 290 491 0 296 329 22 7 chr20 24081561 24081698 -48072184 + MER117 DNA MER1_type 5 143 -54 1321 244 100 30 chr20 24082143 24082603 -48071279 - Charlie4a DNA MER1_type 0 508 17 549 258 202 12 chr20 24083024 24083276 -48070606 + L2 LINE L2 3014 3313 0 749 253 207 15 chr20 24083571 24084008 -48069874 - MLT1G LTR MaLR -2 588 46 233 304 0 45 chr20 24084018 24084130 -48069752 + MIR3 SINE MIR 7 113 -95 283 269 21 11 chr20 24085990 24086083 -48067799 - MER115 DNA AcHobo -446 247 154 207 139 0 0 chr20 24088296 24088332 -48065550 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 684 189 91 0 chr20 24089214 24089357 -48064525 + MER3 DNA MER1_type 41 196 -13 778 154 96 0 chr20 24089970 24090158 -48063724 - L1MA7 LINE L1 0 6291 6086 1124 189 50 11 chr20 24090163 24090423 -48063459 + L1 LINE L1 4180 4449 -1697 501 316 92 14 chr20 24090789 24091007 -48062875 + MIR SINE MIR 5 239 -23 877 318 85 8 chr20 24091055 24091433 -48062449 + LTR16C LTR ERVL 68 474 -17 24 32 0 0 chr20 24091851 24091882 -48062000 + AT_rich Low_complexity Low_complexity 1 31 0 673 290 80 22 chr20 24092497 24092821 -48061061 - LTR16C LTR ERVL 0 491 149 330 298 240 0 chr20 24093470 24093641 -48060241 + MIR SINE MIR 50 261 -1 296 247 43 32 chr20 24144753 24144846 -48009036 - MER115 DNA AcHobo -446 247 154 207 139 0 0 chr20 24147066 24147102 -48006780 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 709 136 106 8 chr20 24147984 24148116 -48005766 + MER3 DNA MER1_type 41 185 -24 831 154 96 0 chr20 24148739 24148927 -48004955 - L1MA7 LINE L1 0 6291 6086 1164 168 51 19 chr20 24148932 24149188 -48004694 + L1 LINE L1 4180 4443 -1703 519 315 93 14 chr20 24149560 24149776 -48004106 + MIR SINE MIR 5 237 -25 862 320 85 8 chr20 24149826 24150204 -48003678 + LTR16C LTR ERVL 68 474 -17 24 32 0 0 chr20 24150622 24150653 -48003229 + AT_rich Low_complexity Low_complexity 1 31 0 660 278 86 28 chr20 24151268 24151592 -48002290 - LTR16C LTR ERVL 0 491 149 368 298 240 0 chr20 24152241 24152412 -48001470 + MIR SINE MIR 50 261 -1 682 295 47 54 chr20 24152621 24152879 -48001003 + MIR SINE MIR 6 261 -1 375 301 49 87 chr20 24153065 24153331 -48000551 + L2 LINE L2 3016 3271 -1 21 0 0 0 chr20 24153765 24153786 -48000096 + AT_rich Low_complexity Low_complexity 1 21 0 232 194 0 60 chr20 24155109 24155176 -47998706 + L1MC4 LINE L1 6644 6706 -1336 322 306 117 15 chr20 24155271 24155477 -47998405 + L2 LINE L2 2367 2593 -721 23 0 0 0 chr20 24156028 24156051 -47997831 + AT_rich Low_complexity Low_complexity 1 23 0 330 297 22 0 chr20 24156440 24156531 -47997351 + MIR SINE MIR 54 146 -62 189 245 94 0 chr20 24157494 24157547 -47996335 - MIR SINE MIR -116 146 89 289 226 16 0 chr20 24157802 24157864 -47996018 - MIR SINE MIR -107 155 93 600 264 29 0 chr20 24157864 24158004 -47995878 - MIR SINE MIR -91 171 28 587 241 90 33 chr20 24158985 24159442 -47994440 - MLT1F LTR MaLR -2 593 1 358 285 74 55 chr20 24159476 24159803 -47994079 - L2 LINE L2 -282 2990 2654 189 0 0 0 chr20 24160360 24160381 -47993501 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 1849 124 22 7 chr20 24160381 24160655 -47993227 - AluSg SINE Alu -32 278 1 260 282 127 7 chr20 24160867 24161009 -47992873 + MER103 DNA DNA 8 166 0 1513 246 52 12 chr20 24161124 24161530 -47992352 - MLT1H LTR MaLR 0 549 128 1533 182 176 9 chr20 24161720 24162055 -47991827 - MSTD LTR MaLR 0 396 6 237 243 140 65 chr20 24162175 24162389 -47991493 - MER90 LTR ERV1 -4 610 381 7762 25 1 1 chr20 24162389 24163988 -47989894 + L1PA4 LINE L1 4554 6152 -3 2494 235 77 47 chr20 24164315 24165173 -47988709 + L1ME3A LINE L1 5239 6131 -39 2958 161 163 5 chr20 24165551 24166160 -47987722 - MER39 LTR ERV1 -2 705 1 183 284 11 91 chr20 24166160 24166248 -47987634 - MIR SINE MIR -105 103 23 225 204 37 19 chr20 24167530 24167584 -47986298 - L3b LINE CR1 -3 1580 1526 433 308 33 16 chr20 24168844 24169026 -47984856 + MIR SINE MIR 78 262 0 229 284 34 128 chr20 24169040 24169188 -47984694 - MIR SINE MIR -70 192 59 261 344 94 16 chr20 24169392 24169520 -47984362 - L2 LINE L2 -3 3269 3132 1001 301 29 29 chr20 24169788 24170200 -47983682 + MARNA DNA Mariner 11 422 -164 2510 68 0 0 chr20 24171828 24172139 -47981743 + AluY SINE Alu 1 311 0 209 288 34 0 chr20 24172577 24172636 -47981246 + L3 LINE CR1 1513 1573 -4 296 192 96 0 chr20 24172731 24172804 -47981078 + LTR16A1 LTR ERVL 216 295 -162 306 294 23 130 chr20 24172914 24173176 -47980706 + L2 LINE L2 2992 3225 -47 1117 258 22 6 chr20 24173182 24173500 -47980382 + L1ME1 LINE L1 5839 6161 -5 826 153 118 0 chr20 24174416 24174560 -47979322 - MLT1E3 LTR MaLR 0 624 464 * 1126 232 85 0 chr20 24174556 24174815 -47979067 - MLT1E3 LTR MaLR -343 281 1 * 1148 272 33 39 chr20 24174815 24175176 -47978706 - MLT1J1 LTR MaLR -38 408 50 339 309 63 57 chr20 24175366 24175452 -47978430 + MARNA DNA Mariner 241 325 -261 2057 138 0 0 chr20 24175452 24175764 -47978118 + AluSx SINE Alu 1 312 0 339 309 63 57 chr20 24175764 24176010 -47977872 + MARNA DNA Mariner 325 575 -11 183 204 0 0 chr20 24176489 24176538 -47977344 + (TG)n Simple_repeat Simple_repeat 2 50 0 853 270 59 22 chr20 24177150 24177420 -47976462 - L2 LINE L2 -2378 936 657 184 203 186 34 chr20 24178367 24178426 -47975456 + L2 LINE L2 523 590 -2724 662 136 8 0 chr20 24178947 24179065 -47974817 + CT-rich Low_complexity Low_complexity 2 120 0 299 356 0 0 chr20 24179132 24179250 -47974632 + (TG)n Simple_repeat Simple_repeat 1 118 0 760 238 55 42 chr20 24180033 24180344 -47973538 + MER33 DNA MER1_type 6 320 -4 395 348 24 18 chr20 24180443 24180607 -47973275 + MIR SINE MIR 71 235 -27 2239 137 14 14 chr20 24181825 24182190 -47971692 - MLT1A1 LTR MaLR 0 365 1 186 43 0 0 chr20 24182527 24182550 -47971332 + (A)n Simple_repeat Simple_repeat 1 23 0 802 249 83 0 chr20 24183229 24183422 -47970460 - MER63A DNA MER1_type 0 210 2 198 143 0 0 chr20 24183927 24183962 -47969920 + (TGGA)n Simple_repeat Simple_repeat 4 38 0 461 100 0 0 chr20 24184184 24184254 -47969628 - AluSx SINE Alu -4 307 238 2490 219 55 52 chr20 24184258 24185555 -47968327 - L1ME1 LINE L1 -12 6347 5039 554 204 21 49 chr20 24185824 24185966 -47967916 + MER63 DNA MER1_type 1 764 -298 617 300 25 50 chr20 24186045 24186362 -47967520 - LTR16C LTR ERVL -49 442 134 591 262 154 27 chr20 24187615 24187836 -47966046 - MIR SINE MIR 0 262 14 403 237 13 0 chr20 24190307 24190463 -47963419 + (CAT)n Simple_repeat Simple_repeat 1 158 0 1511 126 17 0 chr20 24190824 24191055 -47962827 - AluSx SINE Alu -77 235 1 414 299 177 7 chr20 24191371 24191603 -47962279 + LTR16A1 LTR ERVL 177 490 -1 383 344 65 23 chr20 24191764 24191979 -47961903 + MIR SINE MIR 15 238 -24 237 65 0 0 chr20 24191979 24192010 -47961872 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 199 261 22 0 chr20 24192023 24192069 -47961813 - L2 LINE L2 -39 3274 3228 195 250 66 26 chr20 24192082 24192158 -47961724 - L2 LINE L2 -367 2905 2827 411 284 29 0 chr20 24192178 24192280 -47961602 + Charlie8 DNA MER1_type 96 200 -2217 4701 116 49 40 chr20 24192822 24193623 -47960259 + L1PA15 LINE L1 5357 6164 -1 4824 168 47 4 chr20 24193720 24194729 -47959153 + L1MB3 LINE L1 5126 6180 -3 787 283 94 60 chr20 24195439 24195937 -47957945 + LTR33 LTR ERVL 7 521 0 1985 142 152 8 chr20 24195960 24196334 -47957548 - MSTA LTR MaLR 0 428 1 324 290 40 16 chr20 24196407 24196531 -47957351 + MER5A DNA MER1_type 41 167 -22 1240 221 37 0 chr20 24196535 24196834 -47957048 - Charlie4a DNA MER1_type -169 339 30 207 0 0 0 chr20 24196994 24197017 -47956865 + (GTGTG)n Simple_repeat Simple_repeat 3 25 0 367 233 70 0 chr20 24197042 24197128 -47956754 + MIR SINE MIR 47 138 -124 215 241 0 35 chr20 24197393 24197451 -47956431 + GA-rich Low_complexity Low_complexity 5 60 0 862 256 159 75 chr20 24197860 24198005 -47955877 - LTR16C LTR ERVL 0 491 360 1466 187 3 32 chr20 24198005 24198320 -47955562 + AluJo SINE Alu 1 306 -6 862 256 159 75 chr20 24198320 24198627 -47955255 - LTR16C LTR ERVL -131 360 1 23 33 0 0 chr20 24198830 24198860 -47955022 + AT_rich Low_complexity Low_complexity 1 30 0 502 285 158 26 chr20 24199431 24199869 -47954013 - MLT1L LTR MaLR -3 611 1 536 248 159 39 chr20 24200339 24200597 -47953285 - MLT1H LTR MaLR -13 536 248 258 281 104 73 chr20 24200638 24200802 -47953080 - MIR SINE MIR -40 222 54 1657 164 7 23 chr20 24200918 24201228 -47952654 + AluJb SINE Alu 1 305 -7 400 297 83 22 chr20 24201936 24202152 -47951730 + MIR SINE MIR 31 262 0 2221 84 0 3 chr20 24203005 24203302 -47950580 - AluY SINE Alu -12 299 4 398 329 66 9 chr20 24203679 24203907 -47949975 - L1MC4a LINE L1 -1923 5885 5645 303 261 100 15 chr20 24204088 24204218 -47949664 - MLT1K LTR MaLR -22 566 426 275 234 0 11 chr20 24204218 24204312 -47949570 + (TG)n Simple_repeat Simple_repeat 1 93 0 288 240 73 42 chr20 24204312 24204408 -47949474 - MLT1K LTR MaLR -160 428 330 362 299 91 18 chr20 24204960 24205181 -47948701 - MLT1L LTR MaLR -369 246 10 931 250 198 17 chr20 24205375 24205836 -47948046 - L2 LINE L2 0 3313 2770 25 0 0 0 chr20 24206699 24206724 -47947158 + AT_rich Low_complexity Low_complexity 1 25 0 511 135 0 103 chr20 24206851 24206977 -47946905 - MER5A DNA MER1_type -74 115 3 501 303 85 18 chr20 24207600 24207765 -47946117 - MIR SINE MIR -74 188 13 180 265 0 0 chr20 24208553 24208602 -47945280 + MIR SINE MIR 96 144 -64 377 200 13 0 chr20 24210404 24210479 -47943403 + Charlie8 DNA MER1_type 95 170 -2247 691 278 57 14 chr20 24213602 24213811 -47940071 + MIR SINE MIR 20 237 -25 1544 247 62 14 chr20 24215043 24215464 -47938418 - LTR16C LTR ERVL -8 483 43 247 362 73 26 chr20 24215652 24215884 -47937998 - MIR SINE MIR 0 262 20 686 38 0 0 chr20 24216056 24216136 -47937746 - MADE1 DNA Mariner 0 80 1 432 259 85 95 chr20 24217256 24217685 -47936197 - MLT1K LTR MaLR -16 572 134 1524 206 57 33 chr20 24217879 24218275 -47935607 - L1ME LINE L1 -483 5683 5283 2141 126 0 0 chr20 24218736 24219046 -47934836 - AluSx SINE Alu -2 310 1 461 277 119 17 chr20 24219402 24219579 -47934303 - MIR SINE MIR -2 260 66 436 226 0 0 chr20 24220482 24220566 -47933316 - L2 LINE L2 0 3313 3230 234 208 0 0 chr20 24220621 24220674 -47933208 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 263 277 36 45 chr20 24220738 24220850 -47933032 - L2 LINE L2 -166 3147 3037 271 323 43 11 chr20 24221193 24221286 -47932596 + L2 LINE L2 3150 3245 -27 939 310 121 26 chr20 24221588 24222342 -47931540 - L2 LINE L2 -56 3257 2435 32 20 0 20 chr20 24223017 24223052 -47930830 + AT_rich Low_complexity Low_complexity 1 36 -13 1537 178 13 29 chr20 24223052 24223367 -47930515 + AluJo SINE Alu 2 311 -1 32 20 0 20 chr20 24223367 24223381 -47930501 + AT_rich Low_complexity Low_complexity 36 49 0 3870 128 23 3 chr20 24223395 24224011 -47929871 - L1MA4A LINE L1 -14 6289 5662 28 0 0 0 chr20 24224822 24224850 -47929032 + AT_rich Low_complexity Low_complexity 1 28 0 231 36 0 0 chr20 24224856 24224884 -47928998 + (CA)n Simple_repeat Simple_repeat 2 29 0 24 0 0 0 chr20 24224905 24224929 -47928953 + AT_rich Low_complexity Low_complexity 1 24 0 725 277 20 15 chr20 24224983 24225178 -47928704 - MIR SINE MIR -57 205 10 1656 180 0 7 chr20 24226622 24226911 -47926971 - AluJo SINE Alu -25 287 1 775 289 5 0 chr20 24226930 24227117 -47926765 + MIR SINE MIR 29 216 -46 2219 88 0 3 chr20 24227841 24228136 -47925746 + AluSq SINE Alu 1 294 -19 404 313 60 0 chr20 24228161 24228295 -47925587 - MIR SINE MIR -8 254 113 192 221 47 81 chr20 24228480 24228566 -47925316 - MIR SINE MIR -174 88 6 511 289 71 49 chr20 24229994 24230402 -47923480 - L2 LINE L2 -25 3288 2872 268 319 28 14 chr20 24232676 24232817 -47921065 - MIR3 SINE MIR -15 193 51 215 297 60 115 chr20 24233816 24234085 -47919797 + L2 LINE L2 2813 3066 -206 1726 57 18 9 chr20 24235353 24235582 -47918300 - L1PA8 LINE L1 -2 6170 5940 331 267 17 17 chr20 24236059 24236175 -47917707 + CT-rich Low_complexity Low_complexity 2 117 0 1450 296 59 2 chr20 24236479 24236938 -47916944 - LTR16C LTR ERVL -6 485 1 224 309 0 15 chr20 24237619 24237687 -47916195 - L3 LINE CR1 -13 1564 1498 540 276 167 72 chr20 24237693 24238249 -47915633 + L2 LINE L2 1829 2331 -982 1429 174 4 25 chr20 24238249 24238524 -47915358 + L1MA5 LINE L1 6032 6300 0 540 276 167 72 chr20 24238524 24238558 -47915324 + L2 LINE L2 2331 2360 -953 306 0 0 0 chr20 24238558 24238592 -47915290 + (TG)n Simple_repeat Simple_repeat 2 35 0 540 276 167 72 chr20 24238592 24239269 -47914613 + L2 LINE L2 2360 3268 -45 237 330 52 40 chr20 24239342 24239515 -47914367 - L3 LINE CR1 -127 1450 1276 293 278 22 0 chr20 24239920 24240010 -47913872 - L3 LINE CR1 -804 773 682 863 279 8 20 chr20 24240077 24240328 -47913554 + MIR SINE MIR 14 261 -1 248 205 18 0 chr20 24241188 24241253 -47912629 - LTR16B LTR ERVL 0 452 385 2421 138 3 0 chr20 24241262 24241616 -47912266 - MSTA LTR MaLR 0 428 74 1548 173 36 53 chr20 24241598 24242013 -47911869 + MLT2B3 LTR ERVL 153 554 0 * 489 310 134 21 chr20 24242013 24242340 -47911542 - LTR16A LTR ERVL -85 365 2 232 229 0 0 chr20 24242943 24242991 -47910891 - L2 LINE L2 -72 3241 3194 524 237 12 64 chr20 24244137 24244177 -47909705 + MIR SINE MIR 36 77 -185 2266 139 18 18 chr20 24244177 24244565 -47909317 - MLT1B LTR MaLR -2 388 1 524 237 12 64 chr20 24244565 24244697 -47909185 + MIR SINE MIR 77 199 -63 631 279 155 62 chr20 24245011 24245541 -47908341 + MLT1G LTR MaLR 12 590 0 300 274 153 45 chr20 24247546 24247703 -47906179 - MER5A DNA MER1_type 0 189 16 2361 160 54 5 chr20 24248653 24249059 -47904823 - MSTB LTR MaLR 0 426 1 1039 174 31 5 chr20 24249477 24249673 -47904209 - MER3 DNA MER1_type -4 205 5 276 219 8 84 chr20 24250344 24250463 -47903419 - MLT1H LTR MaLR 0 542 433 507 307 30 15 chr20 24250478 24250680 -47903202 - MLT1H LTR MaLR -292 257 53 767 247 95 19 chr20 24250793 24251192 -47902690 - MLT1H LTR MaLR -2 547 26 25 0 0 0 chr20 24252020 24252045 -47901837 + AT_rich Low_complexity Low_complexity 1 25 0 201 263 0 0 chr20 24252200 24252257 -47901625 - MIR SINE MIR -109 153 97 2317 92 0 25 chr20 24253866 24254183 -47899699 + AluSc SINE Alu 1 309 0 522 276 30 20 chr20 24254253 24254473 -47899409 + L1M3d LINE L1 -719 565 -5738 344 348 11 45 chr20 24254461 24254639 -47899243 + L1M3d LINE L1 922 1093 -5210 * 3287 234 29 47 chr20 24254774 24256012 -47897870 + L1M3d LINE L1 794 1896 -4488 1494 148 54 64 chr20 24257016 24257314 -47896568 + AluJb SINE Alu 5 299 -13 549 214 0 0 chr20 24257413 24257511 -47896371 - Tigger5 DNA MER2_type -1 2322 2225 * 1207 194 33 0 chr20 24257507 24257718 -47896164 - Tigger5 DNA MER2_type -2104 219 2 336 94 0 0 chr20 24257725 24257778 -47896104 + (TG)n Simple_repeat Simple_repeat 2 54 0 288 281 39 59 chr20 24257817 24257970 -47895912 + MIR SINE MIR 40 189 -73 2045 187 105 7 chr20 24258173 24258600 -47895282 - MLT1D LTR MaLR 0 505 37 316 209 14 135 chr20 24259038 24259081 -47894801 + MIR SINE MIR 124 171 -91 2118 160 12 45 chr20 24259081 24259318 -47894564 - MLT1B LTR MaLR -4 386 166 2879 7 0 0 chr20 24259318 24259624 -47894258 + AluYa5 SINE Alu 1 306 -5 2118 160 12 45 chr20 24259624 24259785 -47894097 - MLT1B LTR MaLR -224 166 1 316 209 14 135 chr20 24259785 24259889 -47893993 + MIR SINE MIR 171 253 -9 1484 182 138 50 chr20 24260395 24260850 -47893032 + L1ME2 LINE L1 5670 6164 0 2540 221 43 14 chr20 24261416 24261809 -47892073 - MLT1G LTR MaLR -5 585 169 2431 64 0 0 chr20 24261809 24262119 -47891763 + AluY SINE Alu 1 310 0 2540 221 43 14 chr20 24262119 24262284 -47891598 - MLT1G LTR MaLR -421 169 10 225 288 0 15 chr20 24262548 24262614 -47891268 + HAL1 LINE L1 745 809 -1698 286 254 63 58 chr20 24262731 24262920 -47890962 + HAL1 LINE L1 851 1040 -1467 2109 117 3 13 chr20 24262966 24263264 -47890618 + AluSx SINE Alu 1 295 -17 295 279 30 77 chr20 24263542 24263775 -47890107 + HAL1b LINE L1 678 899 -449 1729 95 15 5 chr20 24263904 24264165 -47889717 - L1PA8 LINE L1 0 6172 5862 350 288 72 40 chr20 24264163 24264385 -47889497 + HAL1 LINE L1 2255 2483 -24 * 711 199 23 27 chr20 24264522 24264700 -47889182 - MIR SINE MIR -26 236 62 1241 134 6 0 chr20 24264700 24264879 -47889003 - LTR12 LTR ERV1 -158 556 377 287 245 31 20 chr20 24264880 24264978 -47888904 - LTR30 LTR ERV1 -80 642 544 5711 111 50 66 chr20 24264978 24266151 -47887731 - pTR5 LTR ERV1 -413 2025 741 1924 137 0 0 chr20 24266434 24266705 -47887177 + AluSx SINE Alu 17 287 -25 682 249 117 19 chr20 24267026 24267291 -47886591 + MLT1G LTR MaLR 127 417 -173 24 0 0 0 chr20 24267350 24267374 -47886508 + AT_rich Low_complexity Low_complexity 1 24 0 855 185 23 12 chr20 24267603 24267776 -47886106 + MER5B DNA MER1_type 1 175 -3 273 186 47 58 chr20 24267776 24267862 -47886020 - MER5A DNA MER1_type -65 124 40 360 244 197 0 chr20 24267970 24268097 -47885785 + MIR SINE MIR 108 259 -3 356 215 13 0 chr20 24270329 24270408 -47883474 - MER5A DNA MER1_type -80 109 30 1086 236 103 29 chr20 24270810 24271255 -47882627 + Charlie4a DNA MER1_type 29 506 -2 264 161 48 32 chr20 24271558 24271620 -47882262 - Charlie8 DNA MER1_type -2253 164 102 1801 175 0 7 chr20 24271722 24272019 -47881863 + AluJb SINE Alu 1 295 -17 445 183 53 154 chr20 24272196 24272404 -47881478 - MER53 DNA DNA 0 189 3 843 243 37 8 chr20 24272521 24272764 -47881118 - L1ME3A LINE L1 -8 6162 5913 240 35 0 0 chr20 24272792 24272821 -47881061 + (TG)n Simple_repeat Simple_repeat 2 30 0 1562 225 116 17 chr20 24272904 24273309 -47880573 + LTR16C LTR ERVL 43 487 -4 256 282 56 0 chr20 24273345 24273416 -47880466 - L2 LINE L2 -3 3310 3236 247 287 84 49 chr20 24275709 24275852 -47878030 + MIR SINE MIR 2 149 -113 2575 262 78 58 chr20 24276322 24277322 -47876560 - HAL1 LINE L1 -3 2504 1525 360 64 0 0 chr20 24277322 24277369 -47876513 + (TA)n Simple_repeat Simple_repeat 2 48 0 2575 262 78 58 chr20 24277369 24277528 -47876354 - HAL1 LINE L1 -982 1525 1371 2466 67 0 7 chr20 24277528 24277828 -47876054 + AluY SINE Alu 1 298 -13 2575 262 78 58 chr20 24277828 24277936 -47875946 - HAL1 LINE L1 -1136 1371 1211 255 380 73 0 chr20 24277915 24278065 -47875817 - HAL1 LINE L1 -2044 463 303 * 561 264 51 17 chr20 24278068 24278246 -47875636 - HAL1 LINE L1 -2323 184 1 703 270 85 31 chr20 24279570 24279863 -47874019 + LTR16B LTR ERVL 154 462 -2 2124 115 3 0 chr20 24280592 24280897 -47872985 - AluSx SINE Alu -6 306 1 368 293 25 96 chr20 24281368 24281431 -47872451 + MIR3 SINE MIR 20 86 -122 2500 181 77 4 chr20 24281431 24281912 -47871970 + MLT2B1 LTR ERVL 5 520 0 368 293 25 96 chr20 24281912 24282005 -47871877 + MIR3 SINE MIR 86 165 -43 236 220 34 127 chr20 24283262 24283380 -47870502 + MER5A DNA MER1_type 83 189 0 * 348 212 0 127 chr20 24283277 24283395 -47870487 - MER5A DNA MER1_type -84 105 3 549 227 87 13 chr20 24285325 24285475 -47868407 + MER3 DNA MER1_type 1 161 -48 201 316 71 20 chr20 24285536 24285634 -47868248 - MIR SINE MIR -74 188 86 3937 127 0 3 chr20 24286087 24286668 -47867214 - L1PB3 LINE L1 0 6154 5576 833 214 6 0 chr20 24289029 24289188 -47864694 - FRAM SINE Alu -22 154 1 274 344 86 8 chr20 24290879 24291007 -47862875 + MIR3 SINE MIR 21 158 -50 882 271 106 11 chr20 24291034 24291411 -47862471 - MER113 DNA MER1_type? -43 478 66 360 0 0 0 chr20 24291787 24291827 -47862055 + (TG)n Simple_repeat Simple_repeat 2 41 0 2219 80 0 30 chr20 24292219 24292519 -47861363 + AluY SINE Alu 1 291 -20 671 81 0 0 chr20 24292697 24292784 -47861098 + AluS SINE Alu 2 88 -224 364 231 131 15 chr20 24294824 24294954 -47858928 - MLT1J LTR MaLR -169 342 198 306 291 76 52 chr20 24294944 24295154 -47858728 - MLT1L LTR MaLR -367 248 34 * 2095 125 0 0 chr20 24295214 24295518 -47858364 + AluSx SINE Alu 1 304 -8 398 254 85 32 chr20 24297097 24297286 -47856596 - L2 LINE L2 -208 3064 2866 219 103 0 0 chr20 24297631 24297670 -47856212 + (T)n Simple_repeat Simple_repeat 1 39 0 895 294 136 26 chr20 24297716 24298251 -47855631 - L2 LINE L2 -991 2323 1730 375 268 35 102 chr20 24298257 24298348 -47855534 - L1ME4a LINE L1 -229 5892 5796 1439 187 3 11 chr20 24298348 24298631 -47855251 - AluJo SINE Alu -31 281 1 375 268 35 102 chr20 24298631 24298823 -47855059 - L1ME4a LINE L1 -325 5796 5625 1334 190 105 5 chr20 24300228 24300705 -47853177 - MLT1F1 LTR MaLR -1 566 3 2186 93 17 0 chr20 24300766 24301067 -47852815 + AluSx SINE Alu 2 307 -5 353 309 10 0 chr20 24302883 24302980 -47850902 + MIR SINE MIR 65 162 -100 761 200 8 0 chr20 24303174 24303304 -47850578 + FLAM_A SINE Alu 2 132 -1 392 280 82 22 chr20 24303449 24303631 -47850251 - L1MC5 LINE L1 -52 7909 7717 264 59 0 0 chr20 24303667 24303701 -47850181 + (T)n Simple_repeat Simple_repeat 1 34 0 6390 58 15 49 chr20 24303703 24305554 -47848328 - SVA Other Other -551 1383 1 263 96 19 0 chr20 24305554 24305606 -47848276 + (GGGAGA)n Simple_repeat Simple_repeat 2 54 0 356 192 56 32 chr20 24305627 24305752 -47848130 - L1MC5 LINE L1 -254 7707 7580 192 125 0 0 chr20 24305842 24305874 -47848008 + (TG)n Simple_repeat Simple_repeat 1 32 0 188 86 29 0 chr20 24305991 24306026 -47847856 + (TG)n Simple_repeat Simple_repeat 1 36 0 782 126 0 6 chr20 24306040 24306199 -47847683 + (TG)n Simple_repeat Simple_repeat 1 158 0 406 171 8 114 chr20 24306452 24306575 -47847307 - L1MC5 LINE L1 -698 7263 7154 1555 158 4 7 chr20 24307998 24308276 -47845606 + AluSx SINE Alu 33 309 -3 313 227 64 22 chr20 24308520 24308653 -47845229 + MIR SINE MIR 7 150 -63 230 159 23 0 chr20 24309890 24309934 -47843948 + GA-rich Low_complexity Low_complexity 1 45 0 360 189 0 31 chr20 24309936 24310063 -47843819 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 228 266 0 0 chr20 24311265 24311329 -47842553 + GA-rich Low_complexity Low_complexity 2 65 0 2968 176 2 6 chr20 24311596 24312095 -47841787 - LOR1a LTR ERV1 0 497 1 823 214 254 25 chr20 24313005 24313398 -47840484 - MLT1E3 LTR MaLR -3 621 139 419 142 18 124 chr20 24314154 24314267 -47839615 - MER5A DNA MER1_type -83 106 6 383 259 36 18 chr20 24314852 24315018 -47838864 + (TA)n Simple_repeat Simple_repeat 1 169 0 331 261 210 25 chr20 24315087 24315244 -47838638 + L1ME4a LINE L1 5934 6119 -2 433 244 23 69 chr20 24315468 24315599 -47838283 + L2 LINE L2 3189 3313 0 1882 117 0 11 chr20 24315740 24316014 -47837868 + AluSx SINE Alu 1 271 -41 682 286 167 24 chr20 24316978 24317738 -47836144 - L2 LINE L2 -17 3296 2432 574 255 48 7 chr20 24317771 24317916 -47835966 - MIR SINE MIR -64 198 48 23 54 0 0 chr20 24318084 24318121 -47835761 + AT_rich Low_complexity Low_complexity 1 37 0 1801 220 112 10 chr20 24318159 24318658 -47835224 + L1ME2 LINE L1 5538 6087 -77 465 268 170 78 chr20 24319488 24319965 -47833917 - MLT1H LTR MaLR 0 549 29 250 313 30 20 chr20 24319982 24320081 -47833801 + MIR3 SINE MIR 109 208 0 676 179 19 51 chr20 24321489 24321645 -47832237 - L1PB4 LINE L1 0 6156 6006 767 212 0 0 chr20 24321738 24321884 -47831998 - L1PB4 LINE L1 -154 6002 5857 1798 179 0 3 chr20 24321983 24322296 -47831586 - AluJo SINE Alu 0 312 1 675 167 7 13 chr20 24322910 24323060 -47830822 + GA-rich Low_complexity Low_complexity 1 149 0 400 290 7 65 chr20 24323328 24323483 -47830399 - MIR SINE MIR -58 204 59 2639 118 39 5 chr20 24323876 24324290 -47829592 - MSTA LTR MaLR 0 428 1 1633 234 9 0 chr20 24324845 24325182 -47828700 - MER58B DNA MER1_type 0 341 2 637 279 146 25 chr20 24325559 24325874 -47828008 - MER68 LTR ERV1 -13 549 197 225 313 47 60 chr20 24325937 24326087 -47827795 - MER77 LTR ERV1 -444 161 14 500 313 90 40 chr20 24326118 24326495 -47827387 - MLT1J2 LTR MaLR -2 448 53 237 95 48 24 chr20 24326497 24326539 -47827343 + MER3 DNA MER1_type 160 202 -7 550 271 175 10 chr20 24326558 24326872 -47827010 - L1ME4a LINE L1 -77 6044 5679 21 36 0 0 chr20 24327324 24327352 -47826530 + AT_rich Low_complexity Low_complexity 1 28 0 454 191 0 0 chr20 24328728 24328812 -47825070 - L1ME4a LINE L1 -1163 4983 4900 346 312 24 32 chr20 24329996 24330121 -47823761 + L2 LINE L2 3136 3259 -13 519 69 0 0 chr20 24330121 24330193 -47823689 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 324 351 9 0 chr20 24330270 24330384 -47823498 - MIR SINE MIR 0 262 148 * 497 275 75 58 chr20 24330376 24330763 -47823119 - L2 LINE L2 -2 3311 2911 244 208 222 0 chr20 24330871 24330943 -47822939 - MIR SINE MIR -110 152 65 340 268 72 14 chr20 24332176 24332314 -47821568 - L2 LINE L2 0 3313 3168 984 319 210 15 chr20 24333424 24334139 -47819743 - L2 LINE L2 -508 2806 1953 242 259 301 12 chr20 24334160 24334326 -47819556 + L2 LINE L2 3015 3228 -44 636 237 15 0 chr20 24334494 24334625 -47819257 - MER63A DNA MER1_type 0 210 78 866 264 71 19 chr20 24334919 24335230 -47818652 - LTR16C LTR ERVL -6 485 159 1417 124 0 0 chr20 24335406 24335608 -47818274 + AluSg/x SINE Alu 92 293 -19 429 327 18 60 chr20 24335690 24335911 -47817971 + MIR SINE MIR 1 214 -48 667 197 14 27 chr20 24336727 24336874 -47817008 + L1ME2 LINE L1 6019 6163 -1 428 268 3 0 chr20 24337041 24337402 -47816480 + (CA)n Simple_repeat Simple_repeat 1 362 0 231 311 0 0 chr20 24337428 24337589 -47816293 + (CA)n Simple_repeat Simple_repeat 1 161 0 2085 121 3 0 chr20 24337615 24337913 -47815969 - AluSc SINE Alu -10 299 1 1487 215 0 13 chr20 24337924 24338226 -47815656 - AluJb SINE Alu -14 298 1 724 271 69 2 chr20 24338677 24339080 -47814802 + L1ME2 LINE L1 5699 6143 -21 296 304 134 18 chr20 24339510 24339622 -47814260 - L2 LINE L2 -2 3270 3146 750 274 26 13 chr20 24339686 24339916 -47813966 - MIR SINE MIR -12 250 18 851 240 29 0 chr20 24339918 24340093 -47813789 - MER58A DNA MER1_type 0 224 45 1865 157 0 7 chr20 24340096 24340402 -47813480 + AluJo SINE Alu 1 304 -8 1023 160 44 0 chr20 24342000 24342181 -47811701 - MER5A DNA MER1_type 0 189 1 846 225 24 29 chr20 24342315 24342524 -47811358 - MER3 DNA MER1_type 0 209 2 1523 159 38 0 chr20 24342597 24342861 -47811021 + AluJb SINE Alu 21 294 -18 297 333 54 50 chr20 24344396 24344618 -47809264 - MIR SINE MIR -35 227 5 2824 253 148 93 chr20 24344689 24346077 -47807805 - L2 LINE L2 -926 2388 723 371 216 270 0 chr20 24346077 24346225 -47807657 + MER3 DNA MER1_type 1 188 -21 2824 253 148 93 chr20 24346225 24346637 -47807245 - L2 LINE L2 -2591 723 335 1595 51 0 0 chr20 24350804 24351000 -47802882 + AluY SINE Alu 96 291 -20 186 43 0 0 chr20 24351266 24351289 -47802593 + (CA)n Simple_repeat Simple_repeat 1 23 0 480 287 132 0 chr20 24352561 24352728 -47801154 - MER5A DNA MER1_type 0 189 1 1828 145 3 0 chr20 24353855 24354138 -47799744 + AluJo SINE Alu 21 304 -8 1735 155 3 19 chr20 24354309 24354619 -47799263 + AluJb SINE Alu 1 305 -7 2179 118 36 33 chr20 24354936 24355299 -47798583 + THE1B LTR MaLR 1 364 0 2123 98 3 0 chr20 24355351 24355646 -47798236 - AluSp SINE Alu -17 296 1 356 87 0 0 chr20 24356423 24356469 -47797413 - AluJb SINE Alu -137 165 120 5555 102 35 36 chr20 24357599 24358122 -47795760 - L1MA3 LINE L1 0 6305 5782 2247 99 3 0 chr20 24358122 24358426 -47795456 - AluSg1 SINE Alu -4 305 1 5555 102 35 36 chr20 24358426 24358836 -47795046 - L1MA3 LINE L1 -523 5782 5373 904 113 0 103 chr20 24359244 24359429 -47794453 - AluSg/x SINE Alu -7 305 140 27 0 0 0 chr20 24359854 24359881 -47794001 + AT_rich Low_complexity Low_complexity 1 27 0 454 226 32 75 chr20 24360045 24360231 -47793651 + MER5B DNA MER1_type 1 178 0 198 0 0 0 chr20 24360353 24360375 -47793507 + (GA)n Simple_repeat Simple_repeat 1 22 0 922 251 0 9 chr20 24360400 24360611 -47793271 + MER3 DNA MER1_type 1 209 0 699 165 152 43 chr20 24360745 24360909 -47792973 + MER5A DNA MER1_type 1 182 -7 2351 69 0 7 chr20 24362144 24362447 -47791435 - AluSc SINE Alu -8 301 1 1615 186 0 17 chr20 24362479 24362780 -47791102 + AluJo SINE Alu 17 312 0 733 256 70 64 chr20 24362840 24363261 -47790621 - LTR37B LTR ERV1 0 468 42 192 77 0 0 chr20 24363261 24363287 -47790595 + (CCCTAA)n Simple_repeat Simple_repeat 3 28 0 733 256 70 64 chr20 24363287 24363319 -47790563 - LTR37B LTR ERV1 -426 42 12 1810 190 47 49 chr20 24364281 24364469 -47789413 + MLT1C LTR MaLR 1 188 -279 2136 115 0 0 chr20 24364469 24364794 -47789088 + AluSq SINE Alu 1 313 0 1810 190 47 49 chr20 24364794 24365073 -47788809 + MLT1C LTR MaLR 188 467 0 545 275 187 37 chr20 24367035 24367522 -47786360 + HAL1 LINE L1 1362 1921 -586 276 100 0 0 chr20 24367603 24367643 -47786239 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 707 238 14 0 chr20 24368461 24368604 -47785278 + MER5B DNA MER1_type 10 154 -24 212 328 98 46 chr20 24368631 24368805 -47785077 + MER5A DNA MER1_type 7 189 0 685 226 62 43 chr20 24369418 24369636 -47784246 + MLT1E LTR MaLR 65 394 -260 1753 242 16 18 chr20 24369636 24370083 -47783799 + MER89 LTR ERV1 1 446 -113 361 326 54 0 chr20 24370087 24370216 -47783666 - L2 LINE L2 -1390 1924 1789 984 200 14 73 chr20 24370264 24370313 -47783569 - MER58A DNA MER1_type -2213 207 157 2045 124 3 3 chr20 24370313 24370612 -47783270 - AluSx SINE Alu -13 299 1 2910 152 29 34 chr20 24370621 24371180 -47782702 - MER74A LTR ERVL -2 556 1 984 200 14 73 chr20 24371180 24371340 -47782542 - MER58A DNA MER1_type -2271 149 1 615 310 112 55 chr20 24371400 24371661 -47782221 + HAL1b LINE L1 221 466 -882 1017 221 110 86 chr20 24371661 24372196 -47781686 - MLT1H LTR MaLR -1 548 1 615 310 112 55 chr20 24372196 24372499 -47781383 + HAL1b LINE L1 466 817 -531 1255 161 97 24 chr20 24372877 24373212 -47780670 - MSTD LTR MaLR 0 396 1 198 298 49 71 chr20 24373473 24373698 -47780184 + L2 LINE L2 2526 2745 -569 761 313 92 29 chr20 24373722 24374137 -47779745 + L2 LINE L2 2871 3311 -2 2050 112 7 16 chr20 24374139 24374442 -47779440 + AluSc SINE Alu 3 302 -7 237 239 31 69 chr20 24374616 24374775 -47779107 + L1M4 LINE L1 2205 2357 -3789 484 284 44 108 chr20 24375200 24375450 -47778432 + L1M4 LINE L1 2678 2911 -3235 3372 151 71 3 chr20 24375503 24376081 -47777801 + MER41B LTR ERV1 17 633 -2 24 0 0 0 chr20 24376114 24376138 -47777744 + AT_rich Low_complexity Low_complexity 1 24 0 1864 149 7 0 chr20 24376172 24376467 -47777415 + AluJb SINE Alu 2 298 -14 180 0 0 0 chr20 24376894 24376914 -47776968 + (GGAGA)n Simple_repeat Simple_repeat 2 21 0 712 185 23 52 chr20 24377249 24377422 -47776460 + L2 LINE L2 3144 3311 -2 669 256 104 15 chr20 24377727 24377997 -47775885 + L2 LINE L2 2467 2760 -554 1433 152 126 82 chr20 24378024 24378453 -47775429 - LTR7 LTR ERV1 -2 448 1 2537 79 45 13 chr20 24378453 24378831 -47775051 - HERVH LTR ERV1 0 7713 7324 381 118 105 53 chr20 24378831 24378907 -47774975 - HERVH LTR ERV1 -1894 5819 5740 * 2963 110 7 2 chr20 24378894 24379331 -47774551 - HERVH LTR ERV1 -3783 3930 3492 866 162 20 0 chr20 24379321 24379469 -47774413 - HERVH LTR ERV1 -4423 3290 3140 * 13845 89 55 5 chr20 24379463 24382317 -47771565 - HERVH LTR ERV1 -4726 2987 1 1526 152 126 82 chr20 24382319 24382748 -47771134 - LTR7 LTR ERV1 -2 448 1 358 285 57 0 chr20 24382897 24383020 -47770862 + L2 LINE L2 3141 3270 -2 346 312 24 32 chr20 24434403 24434528 -47719354 + L2 LINE L2 3136 3259 -13 519 69 0 0 chr20 24434528 24434600 -47719282 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 324 351 9 0 chr20 24434677 24434791 -47719091 - MIR SINE MIR 0 262 148 * 481 279 111 75 chr20 24434783 24435170 -47718712 - L2 LINE L2 -2 3311 2911 244 208 222 0 chr20 24435278 24435350 -47718532 - MIR SINE MIR -110 152 65 399 264 57 14 chr20 24436583 24436723 -47717159 - L2 LINE L2 0 3313 3168 984 319 210 15 chr20 24437833 24438548 -47715334 - L2 LINE L2 -508 2806 1953 242 259 301 12 chr20 24438569 24438735 -47715147 + L2 LINE L2 3015 3228 -44 636 237 15 0 chr20 24438903 24439034 -47714848 - MER63A DNA MER1_type 0 210 78 866 264 71 19 chr20 24439328 24439639 -47714243 - LTR16C LTR ERVL -6 485 159 1417 124 0 0 chr20 24439815 24440017 -47713865 + AluSg/x SINE Alu 92 293 -19 429 327 18 60 chr20 24440099 24440320 -47713562 + MIR SINE MIR 1 214 -48 667 197 14 27 chr20 24441136 24441283 -47712599 + L1ME2 LINE L1 6019 6163 -1 428 268 3 0 chr20 24441450 24441811 -47712071 + (CA)n Simple_repeat Simple_repeat 1 362 0 231 311 0 0 chr20 24441837 24441998 -47711884 + (CA)n Simple_repeat Simple_repeat 1 161 0 2085 121 3 0 chr20 24442024 24442322 -47711560 - AluSc SINE Alu -10 299 1 1487 215 0 13 chr20 24442333 24442635 -47711247 - AluJb SINE Alu -14 298 1 724 271 69 2 chr20 24443086 24443489 -47710393 + L1ME2 LINE L1 5699 6143 -21 296 304 134 18 chr20 24443919 24444031 -47709851 - L2 LINE L2 -2 3270 3146 750 274 26 13 chr20 24444095 24444325 -47709557 - MIR SINE MIR -12 250 18 851 240 29 0 chr20 24444327 24444502 -47709380 - MER58A DNA MER1_type 0 224 45 1877 159 0 6 chr20 24444505 24444819 -47709063 + AluJo SINE Alu 1 312 0 1023 160 44 0 chr20 24446409 24446590 -47707292 - MER5A DNA MER1_type 0 189 1 846 225 24 29 chr20 24446724 24446933 -47706949 - MER3 DNA MER1_type 0 209 2 1523 159 38 0 chr20 24447006 24447270 -47706612 + AluJb SINE Alu 21 294 -18 297 333 54 50 chr20 24448806 24449028 -47704854 - MIR SINE MIR -35 227 5 2824 253 148 93 chr20 24449099 24450487 -47703395 - L2 LINE L2 -926 2388 723 371 216 270 0 chr20 24450487 24450635 -47703247 + MER3 DNA MER1_type 1 188 -21 2824 253 148 93 chr20 24450635 24451047 -47702835 - L2 LINE L2 -2591 723 335 1595 51 0 0 chr20 24455214 24455410 -47698472 + AluY SINE Alu 96 291 -20 186 43 0 0 chr20 24455676 24455699 -47698183 + (CA)n Simple_repeat Simple_repeat 1 23 0 480 287 132 0 chr20 24456971 24457138 -47696744 - MER5A DNA MER1_type 0 189 1 1828 145 3 0 chr20 24458265 24458548 -47695334 + AluJo SINE Alu 21 304 -8 1735 155 3 19 chr20 24458719 24459029 -47694853 + AluJb SINE Alu 1 305 -7 2179 118 36 33 chr20 24459346 24459709 -47694173 + THE1B LTR MaLR 1 364 0 2123 98 3 0 chr20 24459761 24460056 -47693826 - AluSp SINE Alu -17 296 1 356 87 0 0 chr20 24460833 24460879 -47693003 - AluJb SINE Alu -137 165 120 5555 102 35 36 chr20 24462009 24462532 -47691350 - L1MA3 LINE L1 0 6305 5782 2247 99 3 0 chr20 24462532 24462836 -47691046 - AluSg1 SINE Alu -4 305 1 5555 102 35 36 chr20 24462836 24463246 -47690636 - L1MA3 LINE L1 -523 5782 5373 892 124 0 102 chr20 24463654 24463840 -47690042 - AluSg/x SINE Alu -6 306 140 27 0 0 0 chr20 24464265 24464292 -47689590 + AT_rich Low_complexity Low_complexity 1 27 0 466 220 32 75 chr20 24464456 24464642 -47689240 + MER5B DNA MER1_type 1 178 0 180 0 0 0 chr20 24464764 24464784 -47689098 + (GA)n Simple_repeat Simple_repeat 1 20 0 922 251 0 9 chr20 24464809 24465020 -47688862 + MER3 DNA MER1_type 1 209 0 699 165 152 43 chr20 24465154 24465318 -47688564 + MER5A DNA MER1_type 1 182 -7 2293 74 0 7 chr20 24466552 24466849 -47687033 - AluSc SINE Alu -14 295 1 1628 195 0 16 chr20 24466869 24467182 -47686700 + AluJo SINE Alu 5 312 0 720 266 66 60 chr20 24467242 24467663 -47686219 - LTR37B LTR ERV1 0 468 42 192 77 0 0 chr20 24467663 24467689 -47686193 + (CCCTAA)n Simple_repeat Simple_repeat 3 28 0 720 266 66 60 chr20 24467689 24467721 -47686161 - LTR37B LTR ERV1 -426 42 12 1810 190 47 49 chr20 24468680 24468868 -47685014 + MLT1C LTR MaLR 1 188 -279 2122 118 0 0 chr20 24468868 24469193 -47684689 + AluSq SINE Alu 1 313 0 1810 190 47 49 chr20 24469193 24469472 -47684410 + MLT1C LTR MaLR 188 467 0 553 275 187 37 chr20 24471434 24471921 -47681961 + HAL1 LINE L1 1362 1921 -586 255 125 0 0 chr20 24472002 24472042 -47681840 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 707 238 14 0 chr20 24472860 24473003 -47680879 + MER5B DNA MER1_type 10 154 -24 217 316 115 63 chr20 24473030 24473204 -47680678 + MER5A DNA MER1_type 7 189 0 695 223 82 55 chr20 24473817 24474035 -47679847 + MLT1E LTR MaLR 65 288 -305 1753 242 16 18 chr20 24474035 24474482 -47679400 + MER89 LTR ERV1 1 446 -113 361 326 54 0 chr20 24474486 24474615 -47679267 - L2 LINE L2 -1390 1924 1789 984 200 14 73 chr20 24474663 24474712 -47679170 - MER58A DNA MER1_type -2213 207 157 2060 120 3 3 chr20 24474712 24475011 -47678871 - AluSx SINE Alu -13 299 1 2910 152 29 34 chr20 24475020 24475579 -47678303 - MER74A LTR ERVL -2 556 1 984 200 14 73 chr20 24475579 24475739 -47678143 - MER58A DNA MER1_type -2271 149 1 615 310 112 55 chr20 24475799 24476060 -47677822 + HAL1b LINE L1 221 466 -882 991 224 112 88 chr20 24476060 24476595 -47677287 - MLT1H LTR MaLR -1 548 1 615 310 112 55 chr20 24476595 24476898 -47676984 + HAL1b LINE L1 466 817 -531 1280 158 97 24 chr20 24477276 24477611 -47676271 - MSTD LTR MaLR 0 396 1 255 297 46 67 chr20 24477861 24478100 -47675782 + L2 LINE L2 2512 2745 -569 761 313 92 29 chr20 24478124 24478539 -47675343 + L2 LINE L2 2871 3311 -2 1887 115 52 3 chr20 24478541 24478777 -47675105 + AluSc SINE Alu 3 257 -52 207 0 0 0 chr20 24478777 24478800 -47675082 + (CACTC)n Simple_repeat Simple_repeat 5 27 0 1887 115 52 3 chr20 24478800 24478850 -47675032 + AluSc SINE Alu 257 303 -6 448 337 42 39 chr20 24479024 24479383 -47674499 + L1M4 LINE L1 2205 2564 -3582 478 283 44 112 chr20 24479608 24479859 -47674023 + L1M4 LINE L1 2678 2911 -3235 3314 161 71 3 chr20 24479912 24480490 -47673392 + MER41B LTR ERV1 17 633 -2 28 0 0 0 chr20 24480519 24480547 -47673335 + AT_rich Low_complexity Low_complexity 1 28 0 1864 149 7 0 chr20 24480581 24480876 -47673006 + AluJb SINE Alu 2 298 -14 180 0 0 0 chr20 24481303 24481323 -47672559 + (GGAGA)n Simple_repeat Simple_repeat 2 21 0 712 185 23 52 chr20 24481658 24481831 -47672051 + L2 LINE L2 3144 3311 -2 669 256 104 15 chr20 24482136 24482406 -47671476 + L2 LINE L2 2467 2760 -554 1377 154 124 77 chr20 24482433 24482861 -47671021 - LTR7 LTR ERV1 -2 448 1 2518 82 45 13 chr20 24482861 24483239 -47670643 - HERVH LTR ERV1 0 7713 7324 381 118 105 53 chr20 24483239 24483315 -47670567 - HERVH LTR ERV1 -1894 5819 5740 * 2936 114 7 2 chr20 24483302 24483739 -47670143 - HERVH LTR ERV1 -3783 3930 3492 866 162 20 0 chr20 24483729 24483877 -47670005 - HERVH LTR ERV1 -4423 3290 3140 * 19992 89 51 7 chr20 24483871 24486730 -47667152 - HERVH LTR ERV1 -4726 2987 1 1414 156 121 77 chr20 24486732 24487161 -47666721 - LTR7 LTR ERV1 -2 448 1 370 285 57 0 chr20 24487310 24487433 -47666449 + L2 LINE L2 3141 3270 -2 323 209 0 23 chr20 24488532 24488618 -47665264 + C-rich Low_complexity Low_complexity 5 88 0 1956 127 7 0 chr20 24489967 24490258 -47663624 + AluSx SINE Alu 1 293 -19 184 286 0 88 chr20 24491315 24491406 -47662476 + L2 LINE L2 3231 3313 0 301 299 78 7 chr20 24491744 24491898 -47661984 + MER103 DNA DNA 1 165 -1 2062 97 0 4 chr20 24493135 24493443 -47660439 - AluSq SINE Alu 0 313 7 1877 133 0 11 chr20 24493487 24493795 -47660087 + AluSx SINE Alu 1 305 0 258 81 0 0 chr20 24493906 24493943 -47659939 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 227 308 29 29 chr20 24495074 24495246 -47658636 - L1M4 LINE L1 -1090 5056 4885 689 99 20 0 chr20 24495303 24495404 -47658478 - AluSx SINE Alu -5 305 203 1063 62 0 0 chr20 24495404 24495534 -47658348 - AluSx SINE Alu -183 130 1 185 286 71 12 chr20 24495768 24495852 -47658030 + MIR3 SINE MIR 7 95 -113 2114 111 30 0 chr20 24497023 24497321 -47656561 + AluSx SINE Alu 1 307 -5 3707 137 55 0 chr20 24497371 24497986 -47655896 - MER39B LTR ERV1 0 653 5 2214 81 10 3 chr20 24498026 24498324 -47655558 + AluSq SINE Alu 1 300 -13 278 271 107 0 chr20 24498593 24498715 -47655167 - LTR16A1 LTR ERVL -1 456 322 315 333 83 6 chr20 24498827 24498983 -47654899 - LTR16C LTR ERVL -321 170 3 2086 95 0 41 chr20 24499297 24499614 -47654268 - AluSx SINE Alu -3 309 6 2034 126 110 40 chr20 24501095 24501469 -47652413 - MER21A LTR ERV1 -20 911 512 1577 209 98 6 chr20 24501470 24501786 -47652096 - MER21B LTR ERV1 -518 345 1 229 316 59 7 chr20 24501792 24501928 -47651954 + L2 LINE L2 1049 1191 -2123 254 213 53 40 chr20 24502116 24502191 -47651691 + MER112 DNA MER1_type 152 227 -33 1298 265 96 49 chr20 24502208 24502846 -47651036 + L2 LINE L2 1305 1972 -1342 456 190 13 0 chr20 24502846 24502925 -47650957 - MER45 DNA AcHobo -960 80 1 370 348 44 13 chr20 24503134 24503292 -47650590 - MIR SINE MIR -95 167 5 1094 177 55 124 chr20 24503328 24503746 -47650136 - MLT1B LTR MaLR 0 390 2 223 141 56 14 chr20 24504246 24504317 -47649565 + (TATAA)n Simple_repeat Simple_repeat 2 75 0 195 283 0 19 chr20 24504995 24505048 -47648834 - L2 LINE L2 0 3313 3262 585 325 173 10 chr20 24505106 24505614 -47648268 - L2 LINE L2 -561 2753 2163 404 346 78 4 chr20 24505927 24506158 -47647724 - MIR SINE MIR -13 249 2 3130 112 24 93 chr20 24506454 24506834 -47647048 + MER4B LTR ERV1 1 486 -293 2175 122 0 0 chr20 24506834 24507145 -47646737 + AluSx SINE Alu 1 311 -1 3130 112 24 93 chr20 24507145 24507420 -47646462 + MER4B LTR ERV1 486 779 0 247 306 45 18 chr20 24508630 24508741 -47645141 - MIR3 SINE MIR -4 204 91 562 269 53 62 chr20 24508754 24508981 -47644901 - MIR SINE MIR -10 252 28 200 244 44 0 chr20 24509719 24509764 -47644118 - L2 LINE L2 -16 3256 3210 198 278 70 78 chr20 24509853 24509968 -47643914 - MIR SINE MIR -137 125 12 239 242 33 0 chr20 24510392 24510483 -47643399 - L1ME4a LINE L1 0 6121 6028 701 308 53 4 chr20 24511027 24511254 -47642628 + MIR SINE MIR 6 243 -19 509 305 133 13 chr20 24511409 24511642 -47642240 - MLT1J2 LTR MaLR -119 331 71 1599 138 0 8 chr20 24511865 24512112 -47641770 - AluSq SINE Alu -68 245 1 1980 117 31 0 chr20 24512667 24512957 -47640925 + AluSx SINE Alu 1 299 -13 182 319 14 14 chr20 24513641 24513710 -47640172 - L2 LINE L2 0 3272 3204 864 247 151 47 chr20 24513941 24514386 -47639496 - LTR16C LTR ERVL 0 491 1 228 67 0 0 chr20 24514705 24514735 -47639147 + (TG)n Simple_repeat Simple_repeat 1 30 0 249 33 0 0 chr20 24515656 24515686 -47638196 + (CA)n Simple_repeat Simple_repeat 2 31 0 1066 254 74 106 chr20 24516450 24517056 -47636826 + MLT1G LTR MaLR 1 582 -8 2255 95 0 7 chr20 24517527 24517831 -47636051 + AluSg SINE Alu 3 304 -6 694 255 184 5 chr20 24517899 24518111 -47635771 + MIR SINE MIR 8 257 -5 342 223 66 146 chr20 24518441 24518697 -47635185 + L1M4 LINE L1 3957 4191 -1955 1792 157 3 23 chr20 24518697 24519003 -47634879 + AluSq SINE Alu 1 300 -13 342 223 66 146 chr20 24519003 24519020 -47634862 + L1M4 LINE L1 4191 4208 -1938 1802 241 73 26 chr20 24519029 24519764 -47634118 + L1M4 LINE L1 4335 5104 -1042 298 91 0 0 chr20 24519769 24519813 -47634069 + L1ME3 LINE L1 6112 6155 -7 614 314 220 5 chr20 24520110 24520483 -47633399 - L3 LINE CR1 -73 1504 1052 616 191 0 37 chr20 24520895 24521031 -47632851 + FLAM_A SINE Alu 1 131 -2 248 298 199 0 chr20 24523059 24523200 -47630682 + MIR SINE MIR 60 228 -34 287 25 25 0 chr20 24523324 24523364 -47630518 + (TG)n Simple_repeat Simple_repeat 2 42 0 1298 211 73 3 chr20 24523473 24523776 -47630106 - MER33 DNA MER1_type 0 324 1 1809 120 85 0 chr20 24524658 24524941 -47628941 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr20 24525284 24525305 -47628577 + AT_rich Low_complexity Low_complexity 1 21 0 500 185 22 0 chr20 24526352 24526495 -47627387 + AluY SINE Alu 218 362 0 537 267 43 51 chr20 24526745 24527000 -47626882 - MER112 DNA MER1_type 0 256 4 480 210 232 7 chr20 24527017 24527155 -47626727 - MER5B DNA MER1_type -5 173 5 2116 86 34 0 chr20 24528244 24528535 -47625347 - AluY SINE Alu -10 301 1 255 152 0 0 chr20 24529006 24529052 -47624830 + (TG)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr20 24529089 24529111 -47624771 + AT_rich Low_complexity Low_complexity 1 22 0 1710 180 0 3 chr20 24529289 24529583 -47624299 - AluJb SINE Alu -17 295 3 475 299 33 38 chr20 24530378 24530562 -47623320 - MIR SINE MIR -6 256 74 861 248 124 32 chr20 24530696 24531011 -47622871 + MLT1G3 LTR MaLR 1 344 -251 474 218 30 105 chr20 24531037 24531170 -47622712 + MLT1G3 LTR MaLR 429 551 -44 444 337 22 16 chr20 24531170 24531354 -47622528 - MIR SINE MIR -71 191 7 194 0 0 37 chr20 24531663 24531690 -47622192 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 2302 67 0 3 chr20 24531706 24532004 -47621878 - AluY SINE Alu -13 298 2 201 324 88 37 chr20 24532017 24532153 -47621729 + L2 LINE L2 3125 3267 -5 654 236 23 14 chr20 24532504 24532689 -47621193 - MIR SINE MIR -63 145 13 712 193 7 22 chr20 24532737 24532872 -47621010 + FLAM_C SINE Alu 1 133 0 2205 123 9 0 chr20 24533680 24534021 -47619861 + L1P LINE L1 4694 5037 -1109 8773 121 0 30 chr20 24534025 24535413 -47618469 - L1P LINE L1 -1438 4708 3363 360 175 0 0 chr20 24535413 24535476 -47618406 - MIR SINE MIR -104 158 96 435 306 60 9 chr20 24535553 24535769 -47618113 - LTR16C LTR ERVL -38 453 227 2358 103 0 0 chr20 24535794 24536086 -47617796 - AluSx SINE Alu -20 292 1 5797 51 1 4 chr20 24536103 24536815 -47617067 - L1PA7 LINE L1 0 6154 5445 250 183 30 168 chr20 24536949 24536999 -47616883 - MLT1H LTR MaLR -8 541 486 1646 174 75 3 chr20 24536999 24537281 -47616601 + AluJb SINE Alu 1 302 -10 250 183 30 168 chr20 24537281 24537361 -47616521 - MLT1H LTR MaLR -63 486 429 503 349 12 0 chr20 24537486 24537658 -47616224 - MLT1H LTR MaLR -298 251 78 2120 123 0 29 chr20 24540501 24540810 -47613072 + AluSx SINE Alu 1 300 -12 2484 49 0 61 chr20 24541068 24541395 -47612487 - AluY SINE Alu -4 307 1 1110 280 69 3 chr20 24541521 24541885 -47611997 - LTR16C LTR ERVL -30 461 74 273 305 42 8 chr20 24542126 24542244 -47611638 + L1MC4a LINE L1 5815 5936 -1872 * 311 226 21 11 chr20 24542234 24542327 -47611555 - L1MB7 LINE L1 -5 6179 6086 * 2981 217 31 6 chr20 24542326 24542971 -47610911 - L1ME1 LINE L1 -230 5936 5276 247 106 0 43 chr20 24542978 24543025 -47610857 + L1MD3 LINE L1 7941 7985 -10 440 322 47 28 chr20 24543783 24543994 -47609888 - L2 LINE L2 0 3313 3099 28 48 0 0 chr20 24544100 24544142 -47609740 + AT_rich Low_complexity Low_complexity 1 42 0 1522 187 34 10 chr20 24544983 24545277 -47608605 - AluJo SINE Alu -11 301 1 22 35 0 0 chr20 24545343 24545372 -47608510 + AT_rich Low_complexity Low_complexity 1 29 0 751 225 157 64 chr20 24547167 24547564 -47606318 + HAL1 LINE L1 1914 2391 -116 1839 196 14 19 chr20 24547564 24547927 -47605955 - MLT1A1 LTR MaLR -4 361 1 751 225 157 64 chr20 24547927 24548055 -47605827 + HAL1 LINE L1 2391 2506 -1 329 319 8 8 chr20 24548107 24548226 -47605656 - MIR SINE MIR -133 129 11 1646 146 51 42 chr20 24548317 24548694 -47605188 - Tigger3(Golem) DNA MER2_type -2 3027 1 2130 110 0 0 chr20 24548865 24549146 -47604736 + AluSg SINE Alu 30 310 0 293 317 107 39 chr20 24549192 24549397 -47604485 + L1MC4a LINE L1 5700 5918 -1890 1712 193 67 20 chr20 24549505 24549862 -47604020 - MLT1A2 LTR MaLR 0 374 1 1701 165 37 0 chr20 24549945 24550218 -47603664 - AluJb SINE Alu -29 283 1 341 217 198 0 chr20 24551086 24551192 -47602690 - MER5A DNA MER1_type -4 185 59 336 245 61 95 chr20 24551246 24551393 -47602489 + MER63A DNA MER1_type 53 194 -16 300 331 0 8 chr20 24551511 24551641 -47602241 + L2 LINE L2 2245 2373 -941 819 115 0 39 chr20 24603432 24603562 -47550320 - AluJo SINE Alu -176 136 12 2037 98 0 0 chr20 24603577 24603918 -47549964 - AluSg SINE Alu 0 347 7 246 311 98 30 chr20 24603931 24604063 -47549819 + MIR SINE MIR 8 148 -114 553 260 56 62 chr20 24604777 24604894 -47548988 + LTR16C LTR ERVL 190 306 -185 1957 125 0 0 chr20 24604894 24605174 -47548708 + AluSx SINE Alu 1 280 -32 324 0 0 0 chr20 24605174 24605210 -47548672 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 553 260 56 62 chr20 24605210 24605395 -47548487 + LTR16C LTR ERVL 304 491 0 351 293 38 0 chr20 24605460 24605566 -47548316 + L2 LINE L2 3185 3294 -19 234 0 0 0 chr20 24606045 24606071 -47547811 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1998 124 13 3 chr20 24606087 24606394 -47547488 + AluSx SINE Alu 1 310 -2 2501 49 0 7 chr20 24606740 24607047 -47546835 - AluY SINE Alu -6 305 1 1914 134 40 0 chr20 24607237 24607535 -47546347 - AluSx SINE Alu -2 310 1 253 304 78 0 chr20 24607536 24607651 -47546231 - MER104 DNA Tc2 -11 169 46 393 191 18 131 chr20 24608263 24608431 -47545451 + LTR37B LTR ERV1 124 272 -196 346 158 168 20 chr20 24608610 24608665 -47545217 + LTR37B LTR ERV1 344 389 -79 369 0 0 0 chr20 24608665 24608706 -47545176 + (CA)n Simple_repeat Simple_repeat 2 42 0 346 158 168 20 chr20 24608706 24608751 -47545131 + LTR37B LTR ERV1 389 459 -9 253 269 127 75 chr20 24608752 24608886 -47544996 + MIR3 SINE MIR 48 188 -20 590 286 77 18 chr20 24609038 24609311 -47544571 + L1ME4a LINE L1 5561 5849 -272 27 0 0 0 chr20 24609937 24609964 -47543918 + AT_rich Low_complexity Low_complexity 1 27 0 315 272 22 0 chr20 24610295 24610387 -47543495 + MER103 DNA DNA 60 153 -13 1434 182 68 0 chr20 24610443 24610723 -47543159 - AluJo SINE Alu -13 299 1 2257 95 0 0 chr20 24610796 24611100 -47542782 - AluSc SINE Alu -5 304 1 692 207 85 38 chr20 24611585 24611936 -47541946 + LTR16C LTR ERVL 79 484 -7 315 250 271 0 chr20 24612242 24612382 -47541500 - MER5A DNA MER1_type -2 187 10 267 315 72 9 chr20 24612390 24612501 -47541381 + L2 LINE L2 3147 3264 -8 856 277 62 11 chr20 24613127 24613484 -47540398 + L1ME2 LINE L1 5651 6025 -139 * 2771 143 16 2 chr20 24613165 24613611 -47540271 + L1MB3 LINE L1 5691 6142 -41 740 192 0 0 chr20 24613612 24613732 -47540150 + FLAM_C SINE Alu 1 120 -13 380 68 0 0 chr20 24613763 24613822 -47540060 + L1MB3 LINE L1 6125 6183 0 2171 123 0 0 chr20 24614285 24614594 -47539288 + AluSq SINE Alu 5 313 0 325 250 48 0 chr20 24615232 24615316 -47538566 + L1ME3A LINE L1 6075 6162 -8 408 260 60 97 chr20 24615350 24615669 -47538213 + L1MC4 LINE L1 7616 7922 -120 2081 104 0 10 chr20 24615706 24616003 -47537879 + AluSq SINE Alu 1 294 -19 495 238 14 49 chr20 24616037 24616180 -47537702 + L1MC4 LINE L1 7903 8040 -2 2082 110 3 7 chr20 24616190 24616489 -47537393 + AluSx SINE Alu 1 298 -14 183 156 0 0 chr20 24616544 24616576 -47537306 + A-rich Low_complexity Low_complexity 1 32 0 1895 154 13 0 chr20 24616587 24616893 -47536989 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr20 24616893 24616915 -47536967 + AT_rich Low_complexity Low_complexity 1 22 0 353 215 83 56 chr20 24617259 24617403 -47536479 + MIR SINE MIR 2 149 -113 2085 114 3 0 chr20 24617896 24618195 -47535687 + AluSq SINE Alu 1 300 -13 2456 62 0 0 chr20 24618542 24618850 -47535032 - AluY SINE Alu -3 308 1 444 233 98 38 chr20 24619099 24619232 -47534650 - MIR SINE MIR -65 197 57 1941 145 11 103 chr20 24619712 24620147 -47533735 + MSTD LTR MaLR 2 396 0 253 246 321 8 chr20 24620312 24620446 -47533436 + Charlie8 DNA MER1_type 101 276 -2141 247 290 0 14 chr20 24620509 24620578 -47533304 + Charlie8 DNA MER1_type 2350 2417 0 1780 169 3 7 chr20 24620596 24620892 -47532990 - AluJo SINE Alu -17 295 1 255 333 45 15 chr20 24620984 24621116 -47532766 + MIR SINE MIR 56 191 -71 749 228 46 64 chr20 24621139 24621299 -47532583 - MER58A DNA MER1_type -2196 224 68 1401 141 47 78 chr20 24621299 24621619 -47532263 - AluJo SINE Alu -2 310 1 749 228 46 64 chr20 24621619 24621677 -47532205 - MER58A DNA MER1_type -2352 68 10 196 319 168 13 chr20 24622389 24622615 -47531267 + L2 LINE L2 2843 3103 -210 221 286 22 55 chr20 24622634 24622725 -47531157 + L2 LINE L2 3225 3312 -1 282 250 40 105 chr20 24622766 24622782 -47531100 - L2 LINE L2 -1 3312 3297 260 27 27 0 chr20 24622782 24622819 -47531063 + (TA)n Simple_repeat Simple_repeat 2 39 0 1972 96 70 0 chr20 24622819 24623091 -47530791 - AluSx SINE Alu -21 291 1 282 250 40 105 chr20 24623091 24623197 -47530685 - L2 LINE L2 -14 3299 3197 953 177 18 0 chr20 24623329 24623493 -47530389 - MER20 DNA MER1_type 0 219 53 654 298 75 26 chr20 24623668 24623894 -47529988 + MER90 LTR ERV1 151 405 -170 598 142 120 87 chr20 24623894 24623934 -47529948 - MER53 DNA DNA 0 189 152 2171 81 0 0 chr20 24623934 24624248 -47529634 - AluY SINE Alu 0 314 1 598 142 120 87 chr20 24624248 24624389 -47529493 - MER53 DNA DNA -37 152 1 654 298 75 26 chr20 24624389 24624551 -47529331 + MER90 LTR ERV1 405 558 -17 521 174 261 7 chr20 24624879 24625017 -47528865 + MIR SINE MIR 72 244 -18 2190 110 3 0 chr20 24625017 24625325 -47528557 - AluSx SINE Alu -3 309 1 410 229 174 0 chr20 24625977 24626086 -47527796 - MER5A DNA MER1_type 0 189 62 2252 85 20 0 chr20 24626086 24626391 -47527491 - AluSp SINE Alu -2 311 1 855 129 0 50 chr20 24626413 24626552 -47527330 - FLAM_C SINE Alu 0 133 2 2031 112 37 0 chr20 24626562 24626858 -47527024 - AluSx SINE Alu -5 307 1 713 181 62 119 chr20 24626870 24627113 -47526769 + MER102a DNA MER1_type 97 325 -5 1439 230 155 22 chr20 24627137 24627613 -47526269 + MLT1F1 LTR MaLR 14 558 -9 302 234 50 59 chr20 24628034 24628195 -47525687 - L1M4 LINE L1 -3111 3035 2879 1614 203 37 17 chr20 24628247 24628655 -47525227 + LTR37B LTR ERV1 53 468 0 1602 183 0 7 chr20 24629046 24629346 -47524536 + AluJo SINE Alu 1 298 -14 273 152 0 22 chr20 24629531 24629577 -47524305 + MIR3 SINE MIR 114 158 -50 560 161 15 106 chr20 24629577 24629651 -47524231 + MER33 DNA MER1_type 1 53 -2420 1882 143 0 10 chr20 24629651 24629958 -47523924 + AluSx SINE Alu 1 304 -8 560 161 15 106 chr20 24629958 24630016 -47523866 + MER33 DNA MER1_type 53 115 -97 896 149 21 10 chr20 24630085 24630279 -47523603 + MER33 DNA MER1_type 156 351 -12 1570 128 0 4 chr20 24630641 24630883 -47522999 + AluSg/x SINE Alu 72 312 0 210 189 27 27 chr20 24632410 24632484 -47521398 + GA-rich Low_complexity Low_complexity 5 78 0 581 217 17 0 chr20 24632509 24632624 -47521258 + FLAM_C SINE Alu 2 118 -25 31 0 0 0 chr20 24632642 24632673 -47521209 + AT_rich Low_complexity Low_complexity 1 31 0 1902 143 3 3 chr20 24632962 24633270 -47520612 - AluSx SINE Alu -4 308 1 242 289 83 33 chr20 24634009 24634130 -47519752 + L2 LINE L2 3165 3291 -22 527 127 0 0 chr20 24634384 24634463 -47519419 + AluJ/FLAM SINE Alu 2 80 -232 191 36 36 0 chr20 24634464 24634492 -47519390 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 2238 82 4 0 chr20 24634547 24634827 -47519055 + AluSg1 SINE Alu 1 281 -28 204 67 0 0 chr20 24634827 24634857 -47519025 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2158 121 0 32 chr20 24635208 24635523 -47518359 - AluSx SINE Alu -7 305 1 1086 274 48 53 chr20 24635862 24636363 -47517519 + MER110 LTR ERV1 1 472 -6 284 0 28 0 chr20 24636970 24637006 -47516876 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr20 24639695 24639718 -47514164 + AT_rich Low_complexity Low_complexity 1 23 0 1679 148 60 25 chr20 24639750 24640033 -47513849 + AluJo SINE Alu 7 299 -13 219 139 0 0 chr20 24640430 24640466 -47513416 + (GAA)n Simple_repeat Simple_repeat 2 37 0 189 196 0 0 chr20 24641068 24641114 -47512768 + C-rich Low_complexity Low_complexity 5 50 0 1399 137 23 104 chr20 24641160 24641358 -47512524 - L1MA8 LINE L1 0 6291 6133 2082 126 3 25 chr20 24641358 24641676 -47512206 - AluSx SINE Alu -1 311 1 1399 137 23 104 chr20 24641676 24641841 -47512041 - L1MA8 LINE L1 -158 6133 5956 23 0 0 0 chr20 24642607 24642630 -47511252 + AT_rich Low_complexity Low_complexity 1 23 0 1787 150 3 27 chr20 24642631 24642925 -47510957 - AluJo SINE Alu -25 287 1 707 160 0 76 chr20 24642951 24643095 -47510787 + FLAM_C SINE Alu 2 134 -9 1828 161 0 10 chr20 24643417 24643722 -47510160 + AluJo SINE Alu 1 302 -10 869 183 52 0 chr20 24643992 24644145 -47509737 - Tigger2 DNA MER2_type 0 2718 2558 * 987 154 16 21 chr20 24644137 24644325 -47509557 - Tigger2 DNA MER2_type -2529 189 3 819 185 0 51 chr20 24645312 24645490 -47508392 + FRAM SINE Alu 1 165 -11 896 188 59 30 chr20 24645704 24645906 -47507976 + MER63A DNA MER1_type 2 209 -1 285 337 42 0 chr20 24646233 24646328 -47507554 + L2 LINE L2 3174 3272 0 1421 196 127 0 chr20 24646392 24646667 -47507215 + AluJb SINE Alu 1 310 -2 2002 137 17 10 chr20 24646789 24647089 -47506793 - AluSx SINE Alu -10 302 1 1094 302 53 14 chr20 24648386 24648922 -47504960 - MER115 DNA AcHobo -11 682 89 1785 164 10 7 chr20 24649030 24649323 -47504559 - AluJb SINE Alu -18 294 1 2280 101 16 3 chr20 24650131 24650437 -47503445 - AluSq SINE Alu -3 310 1 318 127 0 18 chr20 24650719 24650774 -47503108 - U5 snRNA snRNA -62 54 1 27 29 0 0 chr20 24651406 24651440 -47502442 + AT_rich Low_complexity Low_complexity 1 34 0 723 208 46 0 chr20 24651440 24651570 -47502312 - FRAM SINE Alu -45 131 1 2266 97 0 27 chr20 24651595 24651894 -47501988 + AluSg SINE Alu 1 291 -19 1988 150 0 0 chr20 24651900 24652187 -47501695 + AluSx SINE Alu 2 288 -24 243 0 0 0 chr20 24652190 24652217 -47501665 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 544 232 7 58 chr20 24652354 24652509 -47501373 - LTR16C LTR ERVL 0 491 345 3049 194 68 5 chr20 24652620 24652964 -47500918 + MER82 DNA MER2_type 17 417 -236 273 29 0 0 chr20 24652964 24652998 -47500884 + (CA)n Simple_repeat Simple_repeat 2 35 0 3049 194 68 5 chr20 24652998 24653252 -47500630 + MER82 DNA MER2_type 417 653 0 529 241 66 6 chr20 24653252 24653418 -47500464 + LTR37A LTR ERV1 96 271 -155 909 230 34 10 chr20 24653419 24653628 -47500254 + MER58A DNA MER1_type 1 214 -10 1825 149 7 26 chr20 24653634 24653974 -47499908 + AluJb SINE Alu 1 312 0 270 199 12 123 chr20 24653991 24654101 -47499781 + LTR37A LTR ERV1 273 359 -67 907 210 5 15 chr20 24654101 24654301 -47499581 - L1PB4 LINE L1 -4 6152 5955 270 199 12 123 chr20 24654301 24654361 -47499521 + LTR37A LTR ERV1 359 424 -2 2011 125 67 30 chr20 24654728 24655089 -47498793 - THE1C LTR MaLR -1 374 1 264 333 35 0 chr20 24655577 24655664 -47498218 + LTR16C LTR ERVL 232 321 -170 479 191 48 9 chr20 24655664 24655769 -47498113 - AluJb SINE Alu -202 110 2 246 233 0 17 chr20 24655998 24656058 -47497824 - MLT1K LTR MaLR 0 588 530 1751 275 68 30 chr20 24656072 24656388 -47497494 + L1MC4 LINE L1 7281 7583 -459 2120 147 7 0 chr20 24656388 24656695 -47497187 - AluSx SINE Alu -3 309 1 1751 275 68 30 chr20 24656695 24657109 -47496773 + L1MC4 LINE L1 7583 8039 -3 1619 152 68 14 chr20 24657112 24657225 -47496657 + AluJo SINE Alu 1 106 -206 378 0 0 0 chr20 24657225 24657267 -47496615 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1619 152 68 14 chr20 24657267 24657449 -47496433 + AluJo SINE Alu 106 312 0 2329 95 3 7 chr20 24657955 24658261 -47495621 - AluSx SINE Alu -7 305 1 2167 238 31 20 chr20 24659282 24659866 -47494016 + L1MC4 LINE L1 7336 7925 -117 369 195 47 39 chr20 24659897 24660025 -47493857 + L1MC4 LINE L1 7914 8042 0 21 0 0 0 chr20 24660040 24660061 -47493821 + AT_rich Low_complexity Low_complexity 1 21 0 1981 142 0 0 chr20 24660135 24660442 -47493440 + AluSx SINE Alu 1 307 0 3508 101 13 4 chr20 24660711 24661176 -47492706 + MER1A DNA MER1_type 60 528 -1 1732 174 10 26 chr20 24661268 24661579 -47492303 + AluJo SINE Alu 1 306 -6 416 230 202 37 chr20 24661812 24661994 -47491888 - MER63B DNA MER1_type -3 1059 1 457 261 55 70 chr20 24662220 24662492 -47491390 + LTR37B LTR ERV1 201 468 0 534 252 76 57 chr20 24662898 24663108 -47490774 - MER106A DNA MER1_type -22 214 1 1402 233 50 9 chr20 24663321 24663639 -47490243 - LTR16C LTR ERVL 0 491 161 219 349 0 35 chr20 24664230 24664316 -47489566 - L2 LINE L2 -39 3233 3151 1219 121 83 194 chr20 24664325 24664431 -47489451 - MER31A LTR ERV1 -2 483 367 2187 99 0 3 chr20 24664431 24664750 -47489132 - AluSx SINE Alu 0 318 1 1219 121 83 194 chr20 24664750 24665039 -47488843 - MER31A LTR ERV1 -118 367 131 1171 157 34 0 chr20 24665495 24665699 -47488183 - MER31A LTR ERV1 -274 211 1 2065 99 18 21 chr20 24666437 24666761 -47487121 + AluSx SINE Alu 1 323 0 1424 290 26 0 chr20 24666828 24667207 -47486675 + LTR16C LTR ERVL 69 457 -34 434 324 23 0 chr20 24667254 24667470 -47486412 - L2 LINE L2 -921 2393 2173 310 219 42 31 chr20 24667678 24667774 -47486108 - MIR SINE MIR -163 99 3 193 368 149 0 chr20 24668387 24668615 -47485267 + L3 LINE CR1 244 505 -1072 3017 223 61 52 chr20 24668871 24669218 -47484664 + L1ME3 LINE L1 5074 5416 -746 698 211 0 0 chr20 24669218 24669354 -47484528 - FLAM_A SINE Alu 0 137 2 3017 223 61 52 chr20 24669354 24670084 -47483798 + L1ME3 LINE L1 5416 6159 -3 313 258 21 11 chr20 24670306 24670399 -47483483 - HsTC2a DNA Tc2 -2 740 647 563 116 0 11 chr20 24670407 24670502 -47483380 + (TTCC)n Simple_repeat Simple_repeat 4 97 0 1168 157 0 79 chr20 24670513 24670742 -47483140 - AluJo SINE Alu -16 296 86 761 235 115 47 chr20 24670748 24670964 -47482918 - HsTC2a DNA Tc2 -1263 635 435 2278 113 0 0 chr20 24670964 24671266 -47482616 - AluSg SINE Alu -8 302 1 761 235 115 47 chr20 24671266 24671516 -47482366 - HsTC2a DNA Tc2 -1463 435 74 15824 38 6 0 chr20 24671529 24674176 -47479706 + L1PA5 LINE L1 3503 6154 0 500 214 46 38 chr20 24674807 24674938 -47478944 + MLT1H LTR MaLR 29 160 -389 325 215 18 141 chr20 24675089 24675252 -47478630 + MLT1H LTR MaLR 406 548 -1 1597 169 15 11 chr20 24675353 24675619 -47478263 - AluJo SINE Alu -45 267 1 1985 130 13 41 chr20 24675937 24675957 -47477925 - AluSq SINE Alu -6 307 288 877 56 8 8 chr20 24675957 24676082 -47477800 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 1985 130 13 41 chr20 24676082 24676377 -47477505 - AluSq SINE Alu -25 288 1 2369 95 0 10 chr20 24678503 24678807 -47475075 - AluSc SINE Alu -8 301 1 573 176 68 23 chr20 24678827 24678979 -47474903 - L1ME3A LINE L1 -2 6160 6008 931 238 10 5 chr20 24679009 24679202 -47474680 + MER58A DNA MER1_type 30 223 -1 1136 205 75 0 chr20 24679215 24679508 -47474374 - MER33 DNA MER1_type 0 324 10 506 301 7 0 chr20 24680022 24680168 -47473714 + Charlie8 DNA MER1_type 86 232 -2185 10164 80 10 1 chr20 24680192 24682312 -47471570 + L1PA7 LINE L1 4004 6141 -13 1226 26 0 7 chr20 24682315 24682466 -47471416 + (GAA)n Simple_repeat Simple_repeat 2 151 0 10092 128 38 24 chr20 24683336 24684518 -47469364 - Tigger1 DNA MER2_type 0 2418 1204 1970 107 0 63 chr20 24684518 24684863 -47469019 + AluSx SINE Alu 1 326 0 10092 128 38 24 chr20 24684863 24685306 -47468576 - Tigger1 DNA MER2_type -1214 1204 769 720 197 0 15 chr20 24685849 24685986 -47467896 + FAM SINE Alu 37 171 -14 209 278 118 69 chr20 24686762 24686906 -47466976 + MIR3 SINE MIR 9 159 -49 367 216 128 24 chr20 24686922 24687047 -47466835 - L1ME4a LINE L1 -1 6120 5983 250 343 25 16 chr20 24687522 24687647 -47466235 + MIR SINE MIR 17 147 -61 937 157 0 6 chr20 24688500 24688659 -47465223 + L1MB7 LINE L1 5705 5862 -322 230 160 20 40 chr20 24689207 24689257 -47464625 + GA-rich Low_complexity Low_complexity 5 53 0 325 291 40 40 chr20 24689263 24689411 -47464471 + L1MC/D LINE L1 2319 2466 -3960 430 311 101 34 chr20 24689451 24689660 -47464222 + L1MC/D LINE L1 5535 5757 -2331 614 241 68 72 chr20 24689792 24689847 -47464035 + MIR SINE MIR 26 80 -182 387 0 0 0 chr20 24689847 24689890 -47463992 + (TG)n Simple_repeat Simple_repeat 2 44 0 614 241 68 72 chr20 24689890 24690070 -47463812 + MIR SINE MIR 80 260 -2 574 300 92 56 chr20 24690164 24690554 -47463328 + L1M4 LINE L1 4201 4604 -1542 201 156 0 0 chr20 24691874 24691906 -47461976 + CT-rich Low_complexity Low_complexity 1 32 0 577 262 73 0 chr20 24691906 24692253 -47461629 - AluJb SINE Alu 0 495 137 187 315 0 0 chr20 24692597 24692651 -47461231 + MIR SINE MIR 67 120 -142 * 194 345 0 0 chr20 24692635 24692690 -47461192 + L2 LINE L2 3201 3255 -17 610 235 139 36 chr20 24693061 24693312 -47460570 - LTR16A1 LTR ERVL -39 418 142 1076 154 0 0 chr20 24693595 24693757 -47460125 + L1PA8A LINE L1 5952 6113 -18 1532 192 17 3 chr20 24693800 24694085 -47459797 - MER74A LTR ERVL -7 551 263 1255 210 20 78 chr20 24694085 24694432 -47459450 + MLT1A1 LTR MaLR 1 327 -38 908 184 38 14 chr20 24694429 24694655 -47459227 - MER74A LTR ERVL -276 346 73 * 407 349 34 8 chr20 24694652 24694890 -47458992 - LTR16B LTR ERVL -87 377 134 * 256 294 0 54 chr20 24694992 24695084 -47458798 + MIR SINE MIR 176 262 0 363 279 52 22 chr20 24695522 24695658 -47458224 - L1MC5 LINE L1 -38 7923 7784 589 193 34 0 chr20 24695984 24696103 -47457779 - LTR16A LTR ERVL -7 443 321 634 262 37 29 chr20 24696138 24696382 -47457500 - LTR16A LTR ERVL -202 248 3 240 261 15 0 chr20 24697411 24697476 -47456406 + LTR67 LTR ERVL 492 557 0 357 214 64 121 chr20 24698068 24698241 -47455641 - LTR33A LTR ERVL -349 174 12 210 71 0 0 chr20 24699234 24699262 -47454620 + (A)n Simple_repeat Simple_repeat 1 28 0 2269 97 0 0 chr20 24699784 24700084 -47453798 + AluSq SINE Alu 1 300 -13 249 386 148 0 chr20 24700162 24700426 -47453456 + L3 LINE CR1 426 728 -849 262 254 118 0 chr20 24700435 24700545 -47453337 + MER113 DNA MER1_type? 1 123 -398 408 219 252 20 chr20 24700638 24700789 -47453093 + MIR SINE MIR 74 259 -3 25 31 0 0 chr20 24700792 24700824 -47453058 + AT_rich Low_complexity Low_complexity 1 32 0 306 329 243 19 chr20 24701157 24701741 -47452141 + L3 LINE CR1 735 1449 -128 613 295 101 40 chr20 24701789 24702165 -47451717 - LTR16A1 LTR ERVL -1 456 58 485 306 17 12 chr20 24702425 24702598 -47451284 - MER69A DNA AcHobo -3 174 1 419 175 12 25 chr20 24703920 24704000 -47449882 + MIR SINE MIR 74 152 -110 30 45 0 0 chr20 24704079 24704123 -47449759 + AT_rich Low_complexity Low_complexity 1 44 0 192 40 0 0 chr20 24704383 24704408 -47449474 + (TG)n Simple_repeat Simple_repeat 2 26 0 246 311 98 30 chr20 24704933 24705065 -47448817 - MIR SINE MIR -114 148 8 2038 98 0 0 chr20 24705078 24705428 -47448454 + AluSg SINE Alu 7 356 0 819 115 0 39 chr20 24705443 24705573 -47448309 + AluJo SINE Alu 12 136 -176 346 184 0 151 chr20 24705925 24706137 -47447745 + C-rich Low_complexity Low_complexity 1 180 0 280 212 11 112 chr20 24706153 24706332 -47447550 + C-rich Low_complexity Low_complexity 3 163 0 358 220 6 96 chr20 24706366 24706543 -47447339 + C-rich Low_complexity Low_complexity 3 163 0 203 333 11 0 chr20 24706519 24706612 -47447270 + (CACCC)n Simple_repeat Simple_repeat 3 96 0 * 2392 80 3 0 chr20 24706663 24706975 -47446907 - AluSp SINE Alu 0 313 1 441 287 174 29 chr20 24707510 24708140 -47445742 + L1ME2 LINE L1 5295 6036 -85 1651 155 3 17 chr20 24709192 24709352 -47444530 - AluJo SINE Alu -20 292 136 1968 141 3 3 chr20 24709352 24709651 -47444231 - AluSx SINE Alu -13 299 1 1651 155 3 17 chr20 24709651 24709786 -47444096 - AluJo SINE Alu -176 136 1 2143 114 0 0 chr20 24709842 24710139 -47443743 - AluSx SINE Alu -15 297 1 243 0 0 0 chr20 24711278 24711305 -47442577 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1996 126 0 0 chr20 24711313 24711598 -47442284 - AluSx SINE Alu -27 285 1 717 194 0 15 chr20 24712905 24713039 -47440843 + AluJo SINE Alu 3 134 -178 22 0 0 0 chr20 24713203 24713225 -47440657 + AT_rich Low_complexity Low_complexity 1 22 0 802 163 16 0 chr20 24713253 24713376 -47440506 - FLAM_C SINE Alu -17 126 2 281 155 28 0 chr20 24713377 24713448 -47440434 - Charlie5 DNA MER1_type -128 2484 2412 654 107 100 29 chr20 24713457 24713597 -47440285 - L1MA4 LINE L1 0 6300 6151 327 276 114 32 chr20 24713687 24713810 -47440072 - L1ME3 LINE L1 -299 5863 5731 438 228 58 95 chr20 24713883 24713977 -47439905 - L1ME3 LINE L1 -549 5617 5532 1671 208 67 11 chr20 24713977 24714352 -47439530 + MSTD LTR MaLR 1 396 0 438 228 58 95 chr20 24714352 24714446 -47439436 - L1ME3 LINE L1 -634 5532 5436 1559 286 116 39 chr20 24714546 24715580 -47438302 + L2 LINE L2 2081 3272 0 891 171 78 81 chr20 24715689 24715744 -47438138 - Charlie1 DNA MER1_type -1 2760 2706 2043 126 0 3 chr20 24715744 24716046 -47437836 - AluSx SINE Alu -11 301 1 891 171 78 81 chr20 24716046 24716248 -47437634 - Charlie1 DNA MER1_type -55 2706 2504 189 153 305 17 chr20 24716261 24716320 -47437562 + L2 LINE L2 3197 3272 0 234 272 10 78 chr20 24718119 24718222 -47435660 + MIR3 SINE MIR 104 199 -9 232 310 20 20 chr20 24718905 24719005 -47434877 - MIR SINE MIR -42 220 121 470 184 46 9 chr20 24719560 24719669 -47434213 - Charlie4 DNA MER1_type -42 1919 1807 695 199 83 22 chr20 24719728 24719909 -47433973 - Charlie4 DNA MER1_type -1712 249 58 432 317 40 5 chr20 24719910 24720134 -47433748 + L2 LINE L2 1924 2155 -1159 1713 149 0 21 chr20 24720134 24720461 -47433421 - AluJo SINE Alu 0 321 1 720 219 6 24 chr20 24720508 24720677 -47433205 + MIR SINE MIR 86 251 -11 1164 243 252 38 chr20 24720703 24720983 -47432899 + L2 LINE L2 2173 2392 -921 1922 133 0 17 chr20 24720983 24721284 -47432598 - AluSx SINE Alu -16 296 1 1164 243 252 38 chr20 24721284 24721780 -47432102 + L2 LINE L2 2392 2781 -532 1700 156 13 16 chr20 24721780 24722088 -47431794 - AluSx SINE Alu -5 307 1 1164 243 252 38 chr20 24722088 24722233 -47431649 + L2 LINE L2 2781 3312 -1 2016 130 10 0 chr20 24723769 24724069 -47429813 + AluSg SINE Alu 1 303 -7 243 0 0 0 chr20 24725912 24725939 -47427943 + (T)n Simple_repeat Simple_repeat 1 27 0 215 365 79 16 chr20 24727044 24727170 -47426712 - MIR3 SINE MIR -67 141 8 1661 150 29 23 chr20 24728370 24728677 -47425205 + AluSx SINE Alu 1 309 -3 2111 103 28 0 chr20 24728685 24728976 -47424906 + AluSx SINE Alu 1 299 -13 778 141 0 47 chr20 24729156 24729284 -47424598 + FLAM_A SINE Alu 1 122 -11 30 27 0 0 chr20 24729285 24729322 -47424560 + AT_rich Low_complexity Low_complexity 1 37 0 1524 92 0 0 chr20 24730341 24730548 -47423334 - AluSg/x SINE Alu -22 288 82 830 207 0 11 chr20 24730738 24730912 -47422970 - AluJb SINE Alu -11 301 130 2015 119 3 10 chr20 24730934 24731236 -47422646 + AluSx SINE Alu 1 300 -12 448 228 104 47 chr20 24732361 24732506 -47421376 - L1MD3 LINE L1 -3 8039 7904 180 0 0 0 chr20 24732506 24732526 -47421356 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 448 228 104 47 chr20 24732526 24732640 -47421242 - L1MD3 LINE L1 -138 7904 7768 862 181 7 39 chr20 24732644 24732819 -47421063 - AluSg/x SINE Alu 0 303 134 1626 166 0 14 chr20 24732821 24733111 -47420771 - AluJb SINE Alu -7 305 20 1152 286 43 13 chr20 24733156 24733625 -47420257 - L1MC4 LINE L1 -381 7661 7179 209 307 129 21 chr20 24733627 24733767 -47420115 - MIR SINE MIR -102 160 6 1043 211 155 48 chr20 24733906 24734319 -47419563 - LTR16A1 LTR ERVL 0 457 1 487 244 131 12 chr20 24734856 24735024 -47418858 + MER5A DNA MER1_type 2 189 0 213 146 24 0 chr20 24735033 24735074 -47418808 - MER5B DNA MER1_type -1 177 136 1895 126 24 7 chr20 24735075 24735368 -47418514 - AluSx SINE Alu -12 300 3 225 0 0 0 chr20 24735368 24735393 -47418489 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 1694 132 40 4 chr20 24735393 24735666 -47418216 - AluSx SINE Alu -29 283 1 214 238 0 0 chr20 24735666 24735708 -47418174 - MER5B DNA MER1_type -135 43 2 349 333 25 25 chr20 24736399 24736603 -47417279 + MIR SINE MIR 15 218 -44 239 327 58 10 chr20 24736721 24736825 -47417057 + MIR SINE MIR 39 147 -115 2483 180 8 17 chr20 24736881 24737272 -47416610 - L1MB7 LINE L1 -17 6167 5779 1815 169 0 3 chr20 24737272 24737573 -47416309 - AluJb SINE Alu -12 300 1 2483 180 8 17 chr20 24737573 24737654 -47416228 - L1MB7 LINE L1 -405 5779 5699 2239 109 0 3 chr20 24737911 24738224 -47415658 + AluSx SINE Alu 1 312 0 1951 125 0 14 chr20 24739331 24739628 -47414254 + AluSx SINE Alu 1 293 -19 847 219 41 5 chr20 24739644 24739840 -47414042 - MER3 DNA MER1_type -2 207 5 2050 135 0 0 chr20 24740523 24740834 -47413048 + AluSx SINE Alu 1 311 -1 1152 201 23 5 chr20 24740955 24741174 -47412708 - MER58A DNA MER1_type -1 223 1 405 202 56 11 chr20 24741742 24741831 -47412051 - MER91C DNA MER1_type -41 99 7 373 250 90 101 chr20 24741988 24742176 -47411706 - Charlie8 DNA MER1_type -2159 258 73 361 309 135 7 chr20 24742804 24743023 -47410859 + MIR SINE MIR 7 256 -6 1623 130 62 46 chr20 24743955 24744262 -47409620 + AluJb SINE Alu 1 312 0 1742 114 0 8 chr20 24744651 24744906 -47408976 + AluSx SINE Alu 41 293 -19 298 213 43 149 chr20 24744976 24745117 -47408765 - MIR SINE MIR -51 211 86 2144 90 17 0 chr20 24745273 24745562 -47408320 + AluSp SINE Alu 6 299 -14 2154 123 0 0 chr20 24745792 24746100 -47407782 - AluSx SINE Alu -4 308 1 787 121 9 0 chr20 24746229 24746345 -47407537 - FLAM_C SINE Alu -16 117 1 366 205 0 0 chr20 24747254 24747337 -47406545 + (CA)n Simple_repeat Simple_repeat 2 84 0 2163 121 0 0 chr20 24747542 24747848 -47406034 - AluSx SINE Alu -6 306 1 182 61 0 61 chr20 24747896 24747929 -47405953 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 2223 91 3 3 chr20 24748262 24748559 -47405323 - AluSq SINE Alu -16 297 1 246 105 0 0 chr20 24748839 24748877 -47405005 + (CA)n Simple_repeat Simple_repeat 2 39 0 369 232 21 32 chr20 24749653 24749748 -47404134 - MER5A DNA MER1_type -77 112 19 447 274 177 27 chr20 24749794 24749980 -47403902 - MIR SINE MIR -43 219 6 282 179 0 0 chr20 24750380 24750436 -47403446 + (TG)n Simple_repeat Simple_repeat 1 56 0 1066 278 116 14 chr20 24751248 24751662 -47402220 + L2 LINE L2 2858 3313 0 183 42 0 0 chr20 24751700 24751724 -47402158 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 437 221 11 0 chr20 24752079 24752174 -47401708 + MER5A DNA MER1_type 10 105 -84 1999 134 0 0 chr20 24753672 24753978 -47399904 - AluSx SINE Alu -6 306 1 252 350 0 0 chr20 24754504 24754584 -47399298 - L2 LINE L2 -5 3267 3188 1568 177 65 30 chr20 24754754 24755126 -47398756 - Charlie5 DNA MER1_type 0 2620 2236 603 211 8 0 chr20 24755128 24755251 -47398631 - Charlie5 DNA MER1_type -2488 124 1 2236 96 0 0 chr20 24755443 24755745 -47398137 + AluSx SINE Alu 1 302 -10 268 308 58 58 chr20 24758130 24758302 -47395580 - L1ME3A LINE L1 -5 6165 5994 236 77 26 0 chr20 24758758 24758797 -47395085 + (TC)n Simple_repeat Simple_repeat 2 41 0 187 294 118 59 chr20 24759402 24759589 -47394293 - MIR SINE MIR -13 249 52 198 0 0 0 chr20 24761548 24761570 -47392312 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2301 85 3 7 chr20 24761697 24762003 -47391879 + AluSq SINE Alu 1 305 -8 297 246 55 55 chr20 24762991 24763101 -47390781 - MIR SINE MIR -50 212 103 377 275 99 0 chr20 24763199 24763330 -47390552 - L1MD3 LINE L1 -434 7561 7418 429 213 0 32 chr20 24763345 24763439 -47390443 - MLT1F1 LTR MaLR -442 125 35 359 118 3 3 chr20 24763439 24763501 -47390381 - L1MC3 LINE L1 -688 7097 7048 246 171 0 0 chr20 24764189 24764230 -47389652 - MIR SINE MIR -117 145 105 338 264 99 8 chr20 24764468 24764589 -47389293 + MIR SINE MIR 12 143 -119 1406 238 106 20 chr20 24764630 24765025 -47388857 + LTR16C LTR ERVL 63 491 0 201 211 175 0 chr20 24765065 24765122 -47388760 + MIR SINE MIR 195 261 -1 442 261 67 36 chr20 24765279 24765444 -47388438 + MIR SINE MIR 92 261 -1 851 178 0 7 chr20 24765618 24765770 -47388112 - L1PB4 LINE L1 -6 6150 6000 1230 71 36 0 chr20 24765822 24765990 -47387892 - L1PA5 LINE L1 0 6154 5981 1069 46 0 8 chr20 24765991 24766122 -47387760 + L1PA5 LINE L1 5851 5980 -174 1888 169 11 31 chr20 24766137 24766421 -47387461 - MER7A DNA MER2_type -2692 346 71 2195 114 0 0 chr20 24766421 24766720 -47387162 + AluSx SINE Alu 1 299 -13 1888 169 11 31 chr20 24766720 24766789 -47387093 - MER7A DNA MER2_type -2967 71 2 761 151 0 50 chr20 24767527 24767666 -47386216 + FLAM_C SINE Alu 2 133 -10 500 301 93 6 chr20 24767771 24767954 -47385928 + MIR SINE MIR 25 223 -39 1461 238 56 60 chr20 24768742 24769222 -47384660 - L1ME3 LINE L1 -4 6158 5681 586 238 32 43 chr20 24769417 24769602 -47384280 + MIR SINE MIR 78 260 -2 1854 155 0 3 chr20 24770053 24770356 -47383526 - AluSx SINE Alu -10 302 1 1253 157 44 189 chr20 24770708 24771185 -47382697 - L1MC4 LINE L1 0 8042 7635 2161 121 0 7 chr20 24771206 24771512 -47382370 - AluSx SINE Alu -8 304 1 877 204 85 15 chr20 24773323 24773524 -47380358 - MER20 DNA MER1_type -4 215 1 846 210 0 0 chr20 24774286 24774453 -47379429 - L1MB5 LINE L1 0 6174 6008 382 135 0 27 chr20 24774519 24774593 -47379289 - L1ME4a LINE L1 -3 6118 6047 335 281 114 36 chr20 24776879 24777046 -47376836 - MLT1I LTR MaLR -8 401 222 27 0 0 0 chr20 24777188 24777215 -47376667 + AT_rich Low_complexity Low_complexity 1 27 0 1945 121 7 0 chr20 24777970 24778287 -47375595 + AluSx SINE Alu 1 319 0 200 289 118 52 chr20 24778291 24778426 -47375456 + L2 LINE L2 3163 3306 -7 2221 103 0 0 chr20 24779413 24779713 -47374169 + AluSx SINE Alu 1 300 -12 2110 99 0 20 chr20 24779915 24780218 -47373664 - AluSx SINE Alu -15 297 1 1643 153 3 45 chr20 24780252 24780566 -47373316 + AluJo SINE Alu 1 301 -11 501 206 10 0 chr20 24781114 24781216 -47372666 + MIR SINE MIR 66 168 -94 298 217 0 14 chr20 24781472 24781541 -47372341 + MER53 DNA DNA 122 189 0 246 227 0 91 chr20 24781844 24781932 -47371950 - MER116 DNA Mariner 0 80 1 694 215 0 15 chr20 24781985 24782120 -47371762 + FLAM_A SINE Alu 1 133 0 270 81 0 0 chr20 24783288 24783325 -47370557 + (T)n Simple_repeat Simple_repeat 1 37 0 312 279 48 58 chr20 24784762 24784866 -47369016 + L2 LINE L2 3210 3312 -1 678 126 16 63 chr20 24785366 24785493 -47368389 + FRAM SINE Alu 45 165 -11 2175 107 3 0 chr20 24786126 24786434 -47367448 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr20 24786594 24786615 -47367267 + AT_rich Low_complexity Low_complexity 1 21 0 1556 151 7 32 chr20 24786638 24786922 -47366960 - AluJb SINE Alu -7 305 29 544 233 68 14 chr20 24787578 24787724 -47366158 + MER5B DNA MER1_type 3 156 -22 1415 189 38 22 chr20 24787882 24788199 -47365683 - MER33 DNA MER1_type -2 322 1 300 256 25 50 chr20 24788344 24788465 -47365417 + MIR SINE MIR 144 261 -1 2567 65 0 0 chr20 24788663 24788971 -47364911 - AluY SINE Alu -3 308 1 302 218 161 0 chr20 24789781 24789868 -47364014 + MER5A DNA MER1_type 12 112 -77 2309 100 3 0 chr20 24790457 24790757 -47363125 + AluSp SINE Alu 3 303 -10 518 241 69 86 chr20 24791101 24791280 -47362602 - HAL1 LINE L1 -27 2480 2305 2317 110 7 0 chr20 24791280 24791588 -47362294 - AluSx SINE Alu -2 310 1 518 241 69 86 chr20 24791588 24791653 -47362229 - HAL1 LINE L1 -202 2305 2240 380 289 35 75 chr20 24791699 24791900 -47361982 - HAL1 LINE L1 -1797 710 518 448 240 119 96 chr20 24791983 24792295 -47361587 - HAL1 LINE L1 -2185 322 4 30 27 0 0 chr20 24792302 24792339 -47361543 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr20 24792456 24792479 -47361403 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr20 24793029 24793059 -47360823 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 534 153 0 0 chr20 24793138 24793223 -47360659 - AluS SINE Alu 0 310 226 204 125 0 0 chr20 24793238 24793270 -47360612 + (TTCCC)n Simple_repeat Simple_repeat 3 34 0 811 167 0 8 chr20 24793283 24793415 -47360467 - AluJo/FRAM SINE Alu -53 259 129 707 115 44 9 chr20 24793415 24793576 -47360306 - FLAM_C SINE Alu 0 191 27 391 186 9 56 chr20 24793594 24793770 -47360112 - L1ME1 LINE L1 -5 6161 5978 2222 139 0 0 chr20 24793770 24794080 -47359802 + AluSx SINE Alu 1 310 -2 391 186 9 56 chr20 24794080 24794322 -47359560 - L1ME1 LINE L1 -188 5978 5516 595 268 70 95 chr20 24794464 24794864 -47359018 + HAL1b LINE L1 376 765 -583 1110 132 6 0 chr20 24794881 24795048 -47358834 + AluSg/x SINE Alu 143 310 0 2198 102 0 7 chr20 24795063 24795357 -47358525 + AluSg1 SINE Alu 1 292 -17 1015 151 12 0 chr20 24795363 24795529 -47358353 + AluSg/x SINE Alu 140 307 -3 183 100 0 0 chr20 24795716 24795746 -47358136 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2283 87 0 20 chr20 24795756 24796054 -47357828 - AluSg SINE Alu -18 292 1 216 0 0 0 chr20 24796054 24796078 -47357804 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 2205 92 0 0 chr20 24796078 24796359 -47357523 - AluSx SINE Alu -30 282 2 549 224 109 61 chr20 24796359 24796653 -47357229 + HAL1b LINE L1 1041 1348 0 717 200 39 0 chr20 24796939 24797094 -47356788 - MIR SINE MIR -5 257 97 434 211 70 104 chr20 24797687 24797957 -47355925 + LTR37A LTR ERV1 8 268 -158 964 198 0 0 chr20 24797963 24798135 -47355747 - AluJb SINE Alu -3 309 138 1027 196 43 43 chr20 24798188 24798469 -47355413 + Charlie5 DNA MER1_type 2234 2514 -98 273 198 38 85 chr20 24798510 24798559 -47355323 + Charlie5 DNA MER1_type 2500 2550 -74 2165 78 9 56 chr20 24798559 24798881 -47355001 - AluSx SINE Alu -5 307 1 273 198 38 85 chr20 24798881 24798937 -47354945 + Charlie5 DNA MER1_type 2550 2600 -24 186 217 157 24 chr20 24800552 24800635 -47353247 + L3b LINE CR1 1292 1385 -198 4640 200 24 73 chr20 24800666 24800751 -47353131 + L1M1 LINE L1 2136 2224 -5341 2310 101 0 3 chr20 24800751 24801048 -47352834 - AluSg SINE Alu -14 296 1 4640 200 24 73 chr20 24801048 24802323 -47351559 + L1M1 LINE L1 2224 3429 -4136 3852 208 69 16 chr20 24802341 24803332 -47350550 + L1PB1 LINE L1 6 1048 -5815 15049 185 25 10 chr20 24803342 24808601 -47345281 + L1PB1 LINE L1 1297 6683 -184 2055 121 0 10 chr20 24808601 24808914 -47344968 + AluSg SINE Alu 1 310 0 15049 185 25 10 chr20 24808914 24809094 -47344788 + L1PB1 LINE L1 6683 6859 -8 7568 218 22 89 chr20 24809112 24809262 -47344620 + L1M1 LINE L1 3406 3565 -4000 1746 188 3 0 chr20 24809262 24809549 -47344333 + AluSx SINE Alu 1 288 -24 7568 218 22 89 chr20 24809549 24809651 -47344231 + L1M1 LINE L1 3565 3672 -3893 1816 175 3 10 chr20 24809651 24809959 -47343923 + AluJb SINE Alu 5 310 -2 7568 218 22 89 chr20 24809959 24810918 -47342964 + L1M1 LINE L1 3672 4694 -2871 3551 94 70 0 chr20 24810918 24811415 -47342467 + L1PA13 LINE L1 5628 6162 -1 7568 218 22 89 chr20 24811415 24812075 -47341807 + L1M1 LINE L1 4694 5397 -2168 680 244 8 0 chr20 24812075 24812202 -47341680 + FLAM_A SINE Alu 1 128 -14 7568 218 22 89 chr20 24812202 24812417 -47341465 + L1M1 LINE L1 5397 5625 -1940 2248 125 0 0 chr20 24812417 24812721 -47341161 + AluSq SINE Alu 3 306 -7 7568 218 22 89 chr20 24812721 24813665 -47340217 + L1M1 LINE L1 5625 6260 -1305 1883 132 44 0 chr20 24813665 24813982 -47339900 - AluSx SINE Alu 0 329 1 7568 218 22 89 chr20 24813982 24814069 -47339813 + L1M1 LINE L1 6260 6351 -1214 462 127 0 0 chr20 24814063 24814134 -47339748 + L1MA4 LINE L1 5141 5211 -2354 * 1157 201 0 0 chr20 24814192 24814406 -47339476 + L1MA4 LINE L1 5894 6107 -193 5949 135 29 13 chr20 24814407 24815726 -47338156 + L1MA4 LINE L1 6356 7687 -32 2642 268 92 55 chr20 24815787 24816781 -47337101 + L1M4 LINE L1 3602 4664 -1482 1799 168 0 3 chr20 24816781 24817067 -47336815 - AluJb SINE Alu -25 287 3 2642 268 92 55 chr20 24817067 24817446 -47336436 + L1M4 LINE L1 4664 5027 -1119 485 267 75 74 chr20 24817587 24818280 -47335602 + L1M4 LINE L1 2326 3019 -3127 4993 198 71 70 chr20 24818499 24818604 -47335278 + MER31-int LTR ERV1 2824 2927 -2009 180 0 0 0 chr20 24818604 24818624 -47335258 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 4993 198 71 70 chr20 24818624 24819942 -47333940 + MER31-int LTR ERV1 2927 4249 -687 270 218 109 40 chr20 24819946 24820047 -47333835 + LTR37A LTR ERV1 10 117 -309 395 194 3 173 chr20 24820063 24820331 -47333551 + MER31-int LTR ERV1 4411 4556 -380 604 225 6 77 chr20 24820412 24820581 -47333301 + MER31-int LTR ERV1 4571 4727 -209 26 0 0 0 chr20 24820753 24820779 -47333103 + AT_rich Low_complexity Low_complexity 1 26 0 263 134 146 61 chr20 24820782 24820864 -47333018 + MER34 LTR ERV1 450 538 -4 2011 92 0 4 chr20 24820889 24821149 -47332733 + AluSq SINE Alu 42 300 -13 229 233 87 27 chr20 24821152 24821302 -47332580 + L1P LINE L1 3063 3221 -2925 1183 265 136 35 chr20 24821817 24822338 -47331544 + L1MC4 LINE L1 7341 7914 -128 486 274 119 86 chr20 24822436 24823064 -47330818 - L1ME4a LINE L1 -125 5996 5348 1744 180 10 10 chr20 24823129 24823429 -47330453 + AluJo SINE Alu 1 300 -12 221 182 23 0 chr20 24823458 24823502 -47330380 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 233 128 26 0 chr20 24823567 24823606 -47330276 + L1M4 LINE L1 3420 3459 -2687 450 0 0 0 chr20 24825005 24825055 -47328827 + (TA)n Simple_repeat Simple_repeat 1 50 0 2315 67 0 27 chr20 24825133 24825431 -47328451 + AluY SINE Alu 17 306 -5 2040 159 46 21 chr20 24826009 24826381 -47327501 + MLT1B LTR MaLR 6 386 -4 22 35 0 0 chr20 24827141 24827170 -47326712 + AT_rich Low_complexity Low_complexity 1 29 0 279 333 101 38 chr20 24827442 24827679 -47326203 - L3 LINE CR1 -15 1562 1311 1019 219 11 73 chr20 24828244 24828366 -47325516 - LTR16C LTR ERVL -26 465 366 1696 44 29 0 chr20 24828366 24828572 -47325310 + L1PA13 LINE L1 5950 6161 -2 1019 219 11 73 chr20 24828572 24828709 -47325173 - LTR16C LTR ERVL -125 366 222 364 316 17 0 chr20 24828776 24828893 -47324989 - LTR16C LTR ERVL 0 491 373 2085 131 3 13 chr20 24829128 24829442 -47324440 + AluSx SINE Alu 1 311 -1 437 289 14 14 chr20 24830436 24830578 -47323304 - MIR SINE MIR -16 246 105 2290 112 0 0 chr20 24830583 24830879 -47323003 + AluSq SINE Alu 1 296 -17 519 267 85 18 chr20 24831395 24831560 -47322322 - MIR SINE MIR -2 260 85 252 0 0 0 chr20 24831900 24831928 -47321954 + (TG)n Simple_repeat Simple_repeat 1 28 0 2238 109 7 0 chr20 24832426 24832728 -47321154 - AluSx SINE Alu -8 304 1 22 0 0 0 chr20 24834084 24834106 -47319776 + AT_rich Low_complexity Low_complexity 1 22 0 1826 206 50 19 chr20 24835721 24836139 -47317743 + MER63B DNA MER1_type 6 436 0 31 44 0 0 chr20 24836847 24836892 -47316990 + AT_rich Low_complexity Low_complexity 1 45 0 418 150 18 106 chr20 24837015 24837079 -47316803 - MER5B DNA MER1_type -1 177 126 558 174 148 17 chr20 24837079 24837194 -47316688 + FLAM_C SINE Alu 1 130 -3 418 150 18 106 chr20 24837194 24837242 -47316640 - MER5B DNA MER1_type -52 126 75 4461 158 60 34 chr20 24837260 24837332 -47316550 - L1MB7 LINE L1 0 6184 6115 2179 113 34 0 chr20 24837332 24837625 -47316257 + AluSx SINE Alu 2 304 -8 4461 158 60 34 chr20 24837625 24838460 -47315422 - L1MB7 LINE L1 -69 6115 5254 273 197 15 45 chr20 24838465 24838531 -47315351 - MER5B DNA MER1_type -114 64 1 360 280 37 9 chr20 24838694 24838801 -47315081 - Charlie8 DNA MER1_type -2244 173 64 1875 199 51 29 chr20 24838803 24839074 -47314808 + L1MC4 LINE L1 7474 7760 -282 2300 76 0 14 chr20 24839074 24839385 -47314497 + AluSx SINE Alu 1 307 0 1875 199 51 29 chr20 24839385 24839525 -47314357 + L1MC4 LINE L1 7760 7895 -147 267 140 0 0 chr20 24839532 24839582 -47314300 + (GA)n Simple_repeat Simple_repeat 1 50 0 328 115 0 0 chr20 24839599 24839651 -47314231 + L1MC4 LINE L1 7918 7969 -73 592 261 212 33 chr20 24840258 24840340 -47313542 - L2 LINE L2 -5 3308 3242 2405 101 0 0 chr20 24840340 24840646 -47313236 - AluSc SINE Alu -3 306 1 592 261 212 33 chr20 24840646 24840870 -47313012 - L2 LINE L2 -71 3242 2947 386 178 178 0 chr20 24841034 24841141 -47312741 - MER103 DNA DNA -36 130 5 320 309 24 52 chr20 24841708 24841886 -47311996 - MIR3 SINE MIR -64 144 2 2712 120 8 11 chr20 24842395 24842771 -47311111 + THE1C LTR MaLR 1 375 0 396 225 108 31 chr20 24843192 24843321 -47310561 + MIR SINE MIR 5 143 -119 2593 111 11 0 chr20 24843567 24843917 -47309965 + L1PA16 LINE L1 5804 6157 -9 3014 41 0 3 chr20 24844543 24844887 -47308995 + L1PA4 LINE L1 5810 6152 -3 351 0 0 0 chr20 24846615 24846654 -47307228 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5293 103 18 8 chr20 24847554 24848321 -47305561 - L1PB2 LINE L1 0 6151 5377 220 269 0 0 chr20 24849375 24849427 -47304455 + GA-rich Low_complexity Low_complexity 2 53 0 377 268 66 102 chr20 24849939 24850032 -47303850 + L1MC4a LINE L1 5363 5458 -663 2464 89 0 0 chr20 24850032 24850334 -47303548 - AluSc SINE Alu -7 302 1 377 268 66 102 chr20 24850334 24850772 -47303110 + L1MC4a LINE L1 5458 5797 -324 725 303 46 8 chr20 24851968 24852229 -47301653 - L1M4 LINE L1 -2665 3481 3211 5169 145 64 14 chr20 24852728 24853584 -47300298 + MER4D LTR ERV1 5 903 0 673 223 32 81 chr20 24853660 24853907 -47299975 - L1ME1 LINE L1 -201 5965 5731 560 316 40 16 chr20 24854036 24854289 -47299593 - MIR SINE MIR 0 262 4 1101 235 152 24 chr20 24854482 24854983 -47298899 - MLT1G1 LTR MaLR -57 498 1 206 283 19 0 chr20 24857795 24857848 -47296034 - MIR SINE MIR -39 223 170 1690 152 13 13 chr20 24858061 24858377 -47295505 - MER33 DNA MER1_type -8 316 1 772 158 40 128 chr20 24858441 24858641 -47295241 - LTR37B LTR ERV1 0 468 301 2603 70 0 3 chr20 24858641 24858953 -47294929 + AluY SINE Alu 1 311 0 772 158 40 128 chr20 24858953 24859049 -47294833 - LTR37B LTR ERV1 -167 301 198 525 234 18 18 chr20 24860558 24860669 -47293213 + MER81 DNA DNA 1 111 -3 336 215 34 120 chr20 24861261 24861470 -47292412 - L1ME4a LINE L1 -6 6115 5925 2024 120 11 0 chr20 24861478 24861761 -47292121 + AluSx SINE Alu 1 286 -26 25 31 0 0 chr20 24861762 24861794 -47292088 + AT_rich Low_complexity Low_complexity 1 32 0 497 136 95 75 chr20 24861904 24862013 -47291869 + MER113 DNA MER1_type? 80 194 -327 2263 102 0 0 chr20 24862013 24862306 -47291576 + AluSc SINE Alu 1 293 -16 497 136 95 75 chr20 24862306 24862343 -47291539 + MER113 DNA MER1_type? 194 229 -292 490 88 75 0 chr20 24863263 24863410 -47290472 + (TA)n Simple_repeat Simple_repeat 1 158 0 1649 89 0 5 chr20 24863410 24863624 -47290258 - AluSc SINE Alu -26 283 71 743 124 107 0 chr20 24863634 24863755 -47290127 - AluSc SINE Alu -175 134 1 355 278 85 31 chr20 24863994 24864217 -47289665 - L1ME2 LINE L1 -2 6162 5928 7174 39 22 0 chr20 24864225 24865090 -47288792 - L1PA7 LINE L1 -2 6152 5269 406 280 155 18 chr20 24865670 24865838 -47288044 - L2 LINE L2 -861 2453 2263 435 275 141 39 chr20 24865862 24866251 -47287631 - L1MEd LINE L1 -1127 5002 4574 3706 173 71 27 chr20 24866318 24867012 -47286870 + MER44D DNA MER2_type 3 598 -7 745 290 139 55 chr20 24867027 24867847 -47286035 - L1MEd LINE L1 -1643 4486 3598 510 316 68 8 chr20 24868114 24868348 -47285534 + MER46C DNA MER2_type 90 337 -1 460 281 99 4 chr20 24868426 24868679 -47285203 - L1MEd LINE L1 -2884 3245 2969 424 209 83 57 chr20 24868679 24868888 -47284994 - MLT1G LTR MaLR 0 530 354 270 215 6 35 chr20 24868959 24869040 -47284842 - MLT1G LTR MaLR -280 275 200 309 221 26 13 chr20 24869061 24869138 -47284744 - MER96 DNA MER1_type? -1 174 97 812 292 36 23 chr20 24869373 24869859 -47284023 - L1MEd LINE L1 -3646 2483 2034 898 272 147 26 chr20 24869953 24870434 -47283448 - MLT1H1 LTR MaLR 0 555 26 1278 264 103 64 chr20 24870621 24871409 -47282473 - L1MEd LINE L1 -4574 1736 980 1881 128 0 4 chr20 24871409 24871682 -47282200 - AluSx SINE Alu -1 311 40 1278 264 103 64 chr20 24871682 24871703 -47282179 - L1MEd LINE L1 -5330 980 961 2295 82 13 10 chr20 24871703 24872007 -47281875 - AluSc SINE Alu -4 305 1 1278 264 103 64 chr20 24872007 24872409 -47281473 - L1MEd LINE L1 -5349 961 453 277 260 0 0 chr20 24872806 24872879 -47281003 - L1ME LINE L1 -506 5615 5543 1886 137 3 39 chr20 24873028 24873334 -47280548 + AluSx SINE Alu 1 295 -17 195 308 144 0 chr20 24873539 24873643 -47280239 + MIR SINE MIR 126 244 -18 274 346 0 0 chr20 24873663 24873741 -47280141 - MIR SINE MIR -160 102 25 2135 117 7 10 chr20 24873911 24874220 -47279662 - AluSx SINE Alu -4 308 1 310 258 97 0 chr20 24874928 24875021 -47278861 - MER103 DNA DNA -47 119 18 387 319 109 23 chr20 24875538 24875795 -47278087 + L1MEd LINE L1 565 843 -5573 * 683 246 142 25 chr20 24875784 24876215 -47277667 + L1MEd LINE L1 1069 1549 -4867 235 268 102 0 chr20 24876216 24876343 -47277539 + L1MEd LINE L1 1576 1715 -4711 961 251 19 0 chr20 24876345 24876560 -47277322 - MER58B DNA MER1_type 0 341 123 279 173 0 0 chr20 24876605 24876657 -47277225 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 236 297 14 54 chr20 24876657 24876731 -47277151 - MER58 DNA MER1_type -310 76 6 302 296 46 9 chr20 24876746 24876854 -47277028 + L1MEd LINE L1 1586 1697 -4729 240 59 0 0 chr20 24877021 24877055 -47276827 + (A)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr20 24877243 24877264 -47276618 + AT_rich Low_complexity Low_complexity 1 21 0 1418 112 32 90 chr20 24877542 24877820 -47276062 + L1MC1 LINE L1 6072 6333 0 241 304 33 22 chr20 24877901 24877993 -47275889 - MIR SINE MIR -89 173 81 311 353 107 29 chr20 24879012 24879284 -47274598 - L2 LINE L2 -38 3234 2942 202 271 85 0 chr20 24879332 24879391 -47274491 - MIR SINE MIR -2 260 197 209 273 76 0 chr20 24879468 24879534 -47274348 + MIR SINE MIR 190 260 -2 1428 133 103 30 chr20 24879608 24879910 -47273972 - MER33 DNA MER1_type 0 324 1 2355 100 3 0 chr20 24880939 24881249 -47272633 + AluSx SINE Alu 1 311 -1 1614 170 67 0 chr20 24883554 24883866 -47270016 + MER2 DNA MER2_type 13 345 0 439 277 82 19 chr20 24883933 24884092 -47269790 + MIR SINE MIR 48 216 -46 752 188 235 6 chr20 24884101 24884271 -47269611 - MER82 DNA MER2_type 0 653 445 207 292 169 19 chr20 24884330 24884484 -47269398 + MIR SINE MIR 29 205 -57 487 220 0 0 chr20 24884501 24884592 -47269290 - MER82 DNA MER2_type -561 92 2 747 284 98 0 chr20 24884704 24884929 -47268953 - MIR SINE MIR -14 248 2 574 239 15 85 chr20 24885095 24885296 -47268586 - MIR SINE MIR -2 260 74 1573 164 20 8 chr20 24886179 24886429 -47267453 + AluJo SINE Alu 39 291 -21 1363 167 44 9 chr20 24886468 24886695 -47267187 + MER46A DNA MER2_type 1 235 -1 1060 263 93 36 chr20 24886695 24887216 -47266666 - L2 LINE L2 -502 2812 2259 189 278 9 102 chr20 24889611 24889719 -47264163 - L2 LINE L2 -76 3196 3099 194 61 0 30 chr20 24890211 24890244 -47263638 + (TTTAA)n Simple_repeat Simple_repeat 3 34 0 930 172 6 17 chr20 24890712 24890886 -47262996 - AluSg/x SINE Alu 0 310 139 2281 85 3 3 chr20 24892956 24893249 -47260633 - AluSc SINE Alu -16 293 1 256 236 309 39 chr20 24895212 24895390 -47258492 + MIR SINE MIR 31 256 -6 282 236 135 40 chr20 24895677 24895825 -47258057 + MER103 DNA DNA 2 163 -3 1485 127 131 12 chr20 24897131 24897383 -47256499 - AluSx SINE Alu -7 305 24 322 206 99 3 chr20 24898831 24898934 -47254948 - L1ME3A LINE L1 -201 5961 5852 472 291 136 8 chr20 24898986 24899348 -47254534 - L1ME3A LINE L1 -512 5650 5316 1852 256 137 86 chr20 24899357 24901074 -47252808 - L1ME3A LINE L1 -867 5279 3474 234 246 115 0 chr20 24901084 24901145 -47252737 + MER58 DNA MER1_type 36 103 -112 261 0 0 0 chr20 24901145 24901174 -47252708 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 301 263 79 0 chr20 24901178 24901254 -47252628 + MER58 DNA MER1_type 134 2420 0 547 270 78 45 chr20 24901273 24901422 -47252460 - L1ME3A LINE L1 -3558 2588 2445 2334 101 0 0 chr20 24901422 24901719 -47252163 - AluSx SINE Alu -13 299 3 547 270 78 45 chr20 24901719 24901943 -47251939 - L1ME3A LINE L1 -3701 2445 2203 959 153 7 0 chr20 24901963 24902113 -47251769 + AluSg/x SINE Alu 135 285 -25 301 145 0 29 chr20 24902324 24902393 -47251489 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 1908 44 13 0 chr20 24902556 24902783 -47251099 - L1PA7 LINE L1 0 6154 5925 1930 244 103 0 chr20 24903314 24903811 -47250071 + MER119 DNA MER1_type 3 550 -33 245 322 74 27 chr20 24903867 24904016 -47249866 + MIR SINE MIR 31 186 -76 2106 131 3 3 chr20 24904735 24905033 -47248849 - AluSx SINE Alu -14 298 1 354 314 0 10 chr20 24905045 24905147 -47248735 + L2 LINE L2 3178 3278 -35 191 179 0 0 chr20 24905758 24905786 -47248096 + L2 LINE L2 3264 3291 -22 324 312 52 0 chr20 24906611 24906765 -47247117 - L1ME2 LINE L1 -278 5886 5725 1087 180 92 5 chr20 24906896 24907102 -47246780 - MER58A DNA MER1_type 0 224 1 604 275 56 30 chr20 24907153 24907386 -47246496 - L1ME2 LINE L1 -536 5585 5347 371 213 24 63 chr20 24907395 24907522 -47246360 + MLT1I LTR MaLR 281 402 -7 1907 62 3 98 chr20 24907727 24908032 -47245850 - AluSg SINE Alu -14 296 21 269 344 61 23 chr20 24908036 24908298 -47245584 + MLT1J LTR MaLR 200 471 -40 1488 200 165 28 chr20 24909380 24909840 -47244042 - Charlie1b DNA MER1_type 0 523 1 226 295 189 14 chr20 24910203 24910459 -47243423 + L2 LINE L2 1952 2303 -1011 358 287 208 18 chr20 24910459 24910792 -47243090 + L2 LINE L2 2740 3130 -183 305 309 31 0 chr20 24910824 24910921 -47242961 + Charlie1 DNA MER1_type 3 102 -2659 288 231 173 19 chr20 24910929 24911033 -47242849 + L2 LINE L2 3193 3312 -1 1813 179 0 3 chr20 24911172 24911469 -47242413 + AluJo SINE Alu 3 298 -14 382 303 135 11 chr20 24912137 24912315 -47241567 + MIR SINE MIR 31 230 -32 225 0 0 0 chr20 24912330 24912355 -47241527 + (TG)n Simple_repeat Simple_repeat 1 25 0 1931 297 19 6 chr20 24912446 24912985 -47240897 - MLT1H1 LTR MaLR 0 555 10 238 371 17 9 chr20 24913182 24913298 -47240584 - L3 LINE CR1 -561 1016 900 489 291 22 56 chr20 24913620 24913888 -47239994 + HAL1 LINE L1 2246 2504 -3 1146 114 0 0 chr20 24914547 24914806 -47239076 + (GGGGA)n Simple_repeat Simple_repeat 1 259 0 254 279 0 0 chr20 24914834 24914895 -47238987 + MER5A DNA MER1_type 9 69 -120 637 101 9 9 chr20 24915485 24915594 -47238288 + (GGAA)n Simple_repeat Simple_repeat 4 112 0 201 237 268 31 chr20 24915608 24915705 -47238177 + MER5A DNA MER1_type 63 182 -7 638 242 62 6 chr20 24915758 24915919 -47237963 + MER5B DNA MER1_type 3 172 -6 1357 134 65 9 chr20 24916086 24916302 -47237580 + MER30 DNA MER1_type 3 230 0 279 93 0 0 chr20 24917403 24917446 -47236436 + (TG)n Simple_repeat Simple_repeat 1 43 0 825 120 0 0 chr20 24918140 24918278 -47235604 - FLAM_A SINE Alu 0 148 11 1539 183 0 11 chr20 24919205 24919478 -47234404 - AluJo SINE Alu -18 294 25 199 208 21 21 chr20 24920032 24920080 -47233802 - MIR3 SINE MIR -3 205 158 545 287 188 81 chr20 24920612 24921054 -47232828 - L2 LINE L2 -1 3312 2824 736 157 239 0 chr20 24921086 24921245 -47232637 + MER3 DNA MER1_type 13 209 0 222 276 67 29 chr20 24921245 24921350 -47232532 - L2 LINE L2 -575 2739 2631 254 333 108 10 chr20 24921638 24921740 -47232142 - MIR SINE MIR -78 130 19 507 264 72 53 chr20 24923027 24923145 -47230737 - MIR SINE MIR -50 212 98 2539 105 19 35 chr20 24923145 24923515 -47230367 + THE1B LTR MaLR 1 364 0 13034 81 4 6 chr20 24923515 24925019 -47228863 + THE1B-int LTR MaLR 1 1503 -77 2313 109 3 0 chr20 24925019 24925321 -47228561 + AluSq SINE Alu 1 303 -10 13034 81 4 6 chr20 24925321 24925399 -47228483 + THE1B-int LTR MaLR 1503 1580 0 2753 82 19 25 chr20 24925399 24925765 -47228117 + THE1B LTR MaLR 1 364 0 507 264 72 53 chr20 24925765 24925852 -47228030 - MIR SINE MIR -163 99 1 333 298 42 46 chr20 24926095 24926268 -47227614 - MIR SINE MIR -18 190 9 21 36 0 0 chr20 24926816 24926844 -47227038 + AT_rich Low_complexity Low_complexity 1 28 0 790 223 108 52 chr20 24927719 24928006 -47225876 - MLT1J LTR MaLR -109 402 100 321 227 209 36 chr20 24928150 24928375 -47225507 - LTR33 LTR ERVL -2 519 256 602 244 157 28 chr20 24929037 24929254 -47224628 + MIR SINE MIR 18 262 0 32 26 0 0 chr20 24930692 24930731 -47223151 + AT_rich Low_complexity Low_complexity 1 39 0 441 268 18 31 chr20 24930886 24931110 -47222772 + L1MC5 LINE L1 7462 7682 -279 275 246 23 120 chr20 24932407 24932582 -47221300 - MER5B DNA MER1_type -1 177 20 388 261 14 70 chr20 24932409 24932551 -47221331 + MER5A DNA MER1_type 18 151 -38 823 162 13 13 chr20 24933288 24933442 -47220440 - MER5A DNA MER1_type -35 154 1 568 230 54 14 chr20 24933989 24934137 -47219745 - MER5A DNA MER1_type -35 154 1 433 249 55 50 chr20 24934511 24934692 -47219190 + LTR16C LTR ERVL 310 491 0 385 237 0 0 chr20 24936211 24936287 -47217595 - MER5A DNA MER1_type -99 90 15 185 94 31 0 chr20 24936339 24936371 -47217511 + CT-rich Low_complexity Low_complexity 2 34 0 21 0 0 0 chr20 24936388 24936409 -47217473 + AT_rich Low_complexity Low_complexity 1 21 0 2065 128 3 10 chr20 24937900 24938212 -47215670 + AluSx SINE Alu 1 310 -2 369 361 7 26 chr20 24939826 24939981 -47213901 - MER5A DNA MER1_type -31 158 7 1077 206 17 80 chr20 24939982 24940220 -47213662 - MER58A DNA MER1_type -1 223 1 21 0 0 0 chr20 24940328 24940349 -47213533 + AT_rich Low_complexity Low_complexity 1 21 0 245 286 13 39 chr20 24940961 24941038 -47212844 + L2 LINE L2 3232 3306 -7 202 186 23 0 chr20 24941323 24941366 -47212516 - L2 LINE L2 0 3313 3270 268 307 0 0 chr20 24941367 24941442 -47212440 + L1MEc LINE L1 1493 1567 -4829 362 307 166 24 chr20 24941947 24942236 -47211646 + MLT1K LTR MaLR 187 516 -72 352 197 15 153 chr20 24942236 24942373 -47211509 - MLT1H LTR MaLR -2 547 430 377 254 25 17 chr20 24942505 24942623 -47211259 - MLT1H LTR MaLR -396 153 35 783 89 10 0 chr20 24944056 24944157 -47209725 - AluSp/q SINE Alu -20 293 192 232 293 57 70 chr20 24944586 24944743 -47209139 + L2 LINE L2 3159 3313 0 3329 214 32 11 chr20 24946622 24947333 -47206549 + HsTC2c DNA Tc2 1 726 -3 2457 175 120 39 chr20 24948086 24948703 -47205179 - MER21B LTR ERV1 -54 809 143 392 221 11 74 chr20 24948866 24948961 -47204921 - MER21B LTR ERV1 -774 89 1 801 220 217 31 chr20 24949450 24949805 -47204077 - LTR54 LTR ERV1 -1 509 75 268 370 117 0 chr20 24949969 24950123 -47203759 - L2 LINE L2 -8 3305 3134 635 250 7 0 chr20 24950124 24950264 -47203618 - MLT1H LTR MaLR 0 549 409 2834 83 3 25 chr20 24950264 24950627 -47203255 - THE1A LTR MaLR 0 355 1 220 386 14 7 chr20 24950670 24950810 -47203072 - L2 LINE L2 -207 3065 2925 28 61 0 0 chr20 24952900 24952949 -47200933 + AT_rich Low_complexity Low_complexity 1 49 0 180 0 0 0 chr20 24954836 24954856 -47199026 + (GA)n Simple_repeat Simple_repeat 1 20 0 319 306 190 16 chr20 24955690 24955948 -47197934 + L2 LINE L2 3009 3311 -2 205 195 0 0 chr20 24956437 24956478 -47197404 + GA-rich Low_complexity Low_complexity 1 41 0 784 168 16 8 chr20 24957786 24957911 -47195971 - FLAM_C SINE Alu -16 127 2 313 292 69 14 chr20 24959386 24959530 -47194352 + L1ME LINE L1 5615 5766 -355 187 245 19 19 chr20 24960598 24960651 -47193231 + MIR SINE MIR 100 152 -110 3043 144 58 47 chr20 24961863 24961988 -47191894 + L1MB8 LINE L1 5545 5667 -511 182 36 0 36 chr20 24961988 24962016 -47191866 + (TA)n Simple_repeat Simple_repeat 2 28 0 3043 144 58 47 chr20 24962016 24962514 -47191368 + L1MB8 LINE L1 5667 6175 -3 400 231 86 65 chr20 24963306 24963492 -47190390 + MIR SINE MIR 3 192 -70 22 35 0 0 chr20 24963667 24963696 -47190186 + AT_rich Low_complexity Low_complexity 1 29 0 950 90 0 30 chr20 24965140 24965274 -47188608 + L1MA2 LINE L1 6175 6304 0 24 32 0 0 chr20 24965281 24965312 -47188570 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr20 24966214 24966240 -47187642 + AT_rich Low_complexity Low_complexity 1 26 0 479 237 15 22 chr20 24967311 24967446 -47186436 + L1MC5 LINE L1 7739 7872 -89 887 200 186 7 chr20 24967446 24967721 -47186161 + MER5C DNA MER1_type 1 324 0 273 29 0 0 chr20 24969487 24969521 -47184361 + (CAA)n Simple_repeat Simple_repeat 1 34 0 329 276 24 0 chr20 24971093 24971220 -47182662 + (TG)n Simple_repeat Simple_repeat 1 130 0 282 248 261 13 chr20 24971220 24971377 -47182505 - L2 LINE L2 -36 3277 3082 1935 142 10 7 chr20 24972655 24972958 -47180924 - AluSx SINE Alu -8 304 1 298 253 134 100 chr20 24974179 24974846 -47179036 + HAL1 LINE L1 853 1558 -949 2094 113 0 3 chr20 24974846 24975129 -47178753 + AluSx SINE Alu 6 287 -25 298 253 134 100 chr20 24975129 24975324 -47178558 + HAL1 LINE L1 1558 1745 -762 764 298 57 3 chr20 24975338 24975637 -47178245 + L1M4 LINE L1 3875 4189 -1957 471 218 42 104 chr20 24975638 24975831 -47178051 + MLT1G1 LTR MaLR 1 181 -414 355 284 62 23 chr20 24975838 24976014 -47177868 + L1M4 LINE L1 4243 4425 -1721 351 235 143 31 chr20 24976030 24976226 -47177656 - LTR33 LTR ERVL 0 521 304 513 260 27 0 chr20 24976302 24976452 -47177430 - LTR33 LTR ERVL -354 167 14 23 0 0 0 chr20 24976639 24976662 -47177220 + AT_rich Low_complexity Low_complexity 1 23 0 343 289 72 62 chr20 24976757 24976965 -47176917 + L1M4 LINE L1 4771 4980 -1166 226 303 56 0 chr20 24977515 24977604 -47176278 - MIR SINE MIR -6 256 163 1843 156 21 0 chr20 24977605 24977919 -47175963 - AluSq SINE Alu 0 320 1 502 127 13 0 chr20 24977921 24978000 -47175882 - Charlie1a DNA MER1_type -1130 325 246 2684 176 64 103 chr20 24978010 24978672 -47175210 - L1MD1 LINE L1 -22 6220 5594 2150 90 35 0 chr20 24978672 24978982 -47174900 + AluSq SINE Alu 2 313 0 2684 176 64 103 chr20 24978982 24979121 -47174761 - L1MD1 LINE L1 -648 5594 5451 566 216 103 147 chr20 24979121 24979413 -47174469 - Charlie1a DNA MER1_type -1172 283 5 836 235 53 11 chr20 24979632 24979987 -47173895 + L1ME3A LINE L1 5709 6111 -59 307 218 69 10 chr20 24980964 24981065 -47172817 - L1ME4a LINE L1 -9 6112 6006 1625 237 70 84 chr20 24981176 24981818 -47172064 + MER45C DNA AcHobo 1 633 -320 325 204 0 0 chr20 24981814 24981868 -47172014 + MER45C DNA AcHobo 900 953 0 * 2974 193 11 2 chr20 24982217 24982750 -47171132 + L1MB7 LINE L1 5638 6175 -9 522 307 71 8 chr20 24982795 24983049 -47170833 + L1M4 LINE L1 2302 2571 -3575 900 263 92 22 chr20 24983158 24983515 -47170367 + L2 LINE L2 2367 2748 -566 358 71 89 0 chr20 24983545 24983601 -47170281 - Charlie4a DNA MER1_type -55 453 393 267 250 0 15 chr20 24983612 24983680 -47170202 - Charlie4a DNA MER1_type -203 305 239 326 211 28 174 chr20 24983685 24983903 -47169979 + L2 LINE L2 2761 2945 -368 842 263 88 30 chr20 24984121 24984460 -47169422 + L2 LINE L2 2955 3313 0 1296 177 25 22 chr20 24984940 24985217 -47168665 + MER33 DNA MER1_type 47 324 0 2045 144 0 22 chr20 24985294 24985613 -47168269 + AluSx SINE Alu 1 312 0 180 0 0 0 chr20 24985952 24985972 -47167910 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 485 230 35 35 chr20 24986144 24986257 -47167625 - L2 LINE L2 0 3272 3160 190 222 125 56 chr20 24986219 24986291 -47167591 - MER5A DNA MER1_type -106 83 7 * 225 0 0 0 chr20 24987454 24987479 -47166403 + (TG)n Simple_repeat Simple_repeat 2 26 0 430 189 18 0 chr20 24987479 24987590 -47166292 + (TA)n Simple_repeat Simple_repeat 2 114 0 5922 92 16 0 chr20 24987590 24988408 -47165474 - L1PA13 LINE L1 -10 6153 5323 1210 74 0 0 chr20 24988409 24988558 -47165324 - AluY SINE Alu -12 299 151 6460 163 16 3 chr20 24988560 24989711 -47164171 - L1PA13 LINE L1 -825 5321 4157 26 0 0 0 chr20 24990156 24990182 -47163700 + AT_rich Low_complexity Low_complexity 1 26 0 521 240 87 66 chr20 24990851 24991189 -47162693 + L2 LINE L2 2967 3311 -2 262 293 17 17 chr20 24991347 24991463 -47162419 + MLT1L LTR MaLR 490 605 -10 194 0 0 37 chr20 24991764 24991791 -47162091 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 6038 72 27 4 chr20 24991878 24992867 -47161015 - L1PA10 LINE L1 -5 6163 5174 2152 94 0 21 chr20 24992925 24993277 -47160605 + AluY SINE Alu 1 346 0 503 221 201 13 chr20 24993291 24993440 -47160442 - MER5A DNA MER1_type 0 189 13 5042 170 45 7 chr20 24995131 24996138 -47157744 + L1MC1 LINE L1 5283 6327 -6 1840 166 7 10 chr20 24996138 24996433 -47157449 + AluJb SINE Alu 1 294 -18 404 268 81 34 chr20 24996608 24996843 -47157039 + MLT1J LTR MaLR 22 267 -244 1424 236 56 11 chr20 24996898 24997347 -47156535 - Charlie4a DNA MER1_type -4 504 36 1015 213 60 24 chr20 24997625 24997874 -47156008 + MIR SINE MIR 1 258 -4 338 160 0 0 chr20 24998147 24998213 -47155669 - L1ME2 LINE L1 -9 6155 6097 303 304 37 43 chr20 24998272 24998433 -47155449 - L1M4 LINE L1 -778 5368 5209 307 342 97 59 chr20 24998542 24998779 -47155103 + L2 LINE L2 2988 3233 -39 30 0 0 0 chr20 24999192 24999222 -47154660 + AT_rich Low_complexity Low_complexity 1 30 0 338 139 0 14 chr20 25000070 25000142 -47153740 + MER3 DNA MER1_type 98 168 -41 * 1475 186 58 23 chr20 25000135 25000396 -47153486 + MER3 DNA MER1_type 2214 2495 -129 1439 174 74 11 chr20 25000396 25000666 -47153216 + AluJo SINE Alu 3 289 -23 1475 186 58 23 chr20 25000666 25000801 -47153081 + MER3 DNA MER1_type 2495 2624 0 392 233 14 86 chr20 25003621 25003653 -47150229 + MLT1K LTR MaLR 376 409 -179 2268 111 36 30 chr20 25003653 25004015 -47149867 + THE1B LTR MaLR 1 364 0 392 233 14 86 chr20 25004015 25004192 -47149690 + MLT1K LTR MaLR 409 570 -18 189 274 354 0 chr20 25004333 25004446 -47149436 - MER5A DNA MER1_type -36 153 1 1654 65 0 13 chr20 25004917 25005147 -47148735 + L1PA8 LINE L1 5939 6165 -7 496 262 121 46 chr20 25005548 25005937 -47147945 - HAL1 LINE L1 -10 2497 2080 238 270 32 95 chr20 25006105 25006231 -47147651 - HAL1 LINE L1 -726 1781 1664 2016 195 61 2 chr20 25006398 25006854 -47147028 + MLT1D LTR MaLR 23 505 0 257 296 53 68 chr20 25007223 25007429 -47146453 - HAL1 LINE L1 -2287 220 18 673 267 73 14 chr20 25007634 25007922 -47145960 - LTR16C LTR ERVL -2 489 185 519 228 93 26 chr20 25008701 25008894 -47144988 - LTR33 LTR ERVL -9 512 307 786 248 69 45 chr20 25009428 25009674 -47144208 + MIR SINE MIR 11 262 0 305 127 25 76 chr20 25009749 25009828 -47144054 - MADE1 DNA Mariner 0 80 6 975 271 21 27 chr20 25009849 25010225 -47143657 - L1ME1 LINE L1 -15 6220 5847 663 201 126 0 chr20 25010228 25010402 -47143480 - L1ME1 LINE L1 -657 5578 5383 4336 219 80 35 chr20 25010489 25010506 -47143376 - L1ME1 LINE L1 -800 5415 5400 2558 10 0 0 chr20 25010506 25010794 -47143088 - L1PA2 LINE L1 -5 6150 5863 4336 219 80 35 chr20 25010794 25011383 -47142499 - L1ME1 LINE L1 -815 5400 4839 1694 169 11 11 chr20 25011383 25011656 -47142226 + AluSx SINE Alu 1 273 -39 4336 219 80 35 chr20 25011656 25012582 -47141300 - L1ME1 LINE L1 -1376 4839 3812 812 81 40 8 chr20 25012585 25012709 -47141173 - L1PB1 LINE L1 0 6867 6740 16806 164 26 13 chr20 25012723 25016904 -47136978 - L1PB1 LINE L1 -395 6472 2186 2327 98 0 13 chr20 25016904 25017211 -47136671 - AluY SINE Alu -8 303 1 16806 164 26 13 chr20 25017211 25019425 -47134457 - L1PB1 LINE L1 -4681 2186 1 768 211 15 43 chr20 25019425 25019695 -47134187 - L1ME1 LINE L1 -2389 3826 2688 5836 148 13 24 chr20 25019836 25021991 -47131891 + L1PB2 LINE L1 4027 6149 -2 5192 246 102 28 chr20 25022775 25025244 -47128638 - L1ME1 LINE L1 -3526 2689 51 2139 132 13 7 chr20 25027535 25027845 -47126037 + AluSx SINE Alu 1 312 0 2976 17 3 0 chr20 25027862 25028220 -47125662 - L1PA3 LINE L1 -333 5822 5464 2877 32 0 3 chr20 25028220 25028560 -47125322 + L1PA3 LINE L1 5809 6152 -3 27 0 0 0 chr20 25028560 25028587 -47125295 + AT_rich Low_complexity Low_complexity 1 27 0 364 231 19 0 chr20 25028621 25028725 -47125157 - L1ME3 LINE L1 -114 6048 5943 585 244 23 17 chr20 25029390 25029562 -47124320 + MER69A DNA AcHobo 3 175 -2 21 0 0 0 chr20 25029625 25029646 -47124236 + AT_rich Low_complexity Low_complexity 1 21 0 466 287 145 18 chr20 25029667 25029949 -47123933 + L1M4 LINE L1 4590 4907 -1239 20229 123 43 8 chr20 25029950 25033262 -47120620 + L1M1 LINE L1 1 3429 -4136 189 245 20 20 chr20 25033262 25033311 -47120571 - L2 LINE L2 -1510 1804 1756 1670 194 101 44 chr20 25033377 25033851 -47120031 - MLT1D LTR MaLR 0 505 5 254 300 167 82 chr20 25033887 25034784 -47119098 + L2 LINE L2 2307 3272 0 578 259 112 58 chr20 25035218 25035496 -47118386 + MLT1H LTR MaLR 110 402 -147 979 270 80 20 chr20 25035697 25036389 -47117493 + L1MEc LINE L1 2173 2885 -3330 1939 153 11 21 chr20 25036430 25036809 -47117073 + L1MB1 LINE L1 5760 6134 -34 714 233 116 46 chr20 25036813 25037484 -47116398 + L1MEc LINE L1 2886 3603 -2612 * 5101 141 20 28 chr20 25037462 25038363 -47115519 + L1M3f LINE L1 2 895 -4433 374 177 21 42 chr20 25038362 25038458 -47115424 - L1MEc LINE L1 -6233 163 70 * 248 179 39 51 chr20 25038459 25038537 -47115345 + MER46C DNA MER2_type 262 338 0 274 253 21 32 chr20 25038553 25038648 -47115234 - Charlie7 DNA MER1_type -1973 639 546 233 305 42 8 chr20 25039179 25039297 -47114585 + LTR67 LTR ERVL 432 553 -4 448 288 182 28 chr20 25039313 25039516 -47114366 - Charlie7 DNA MER1_type -2084 528 358 2024 130 38 0 chr20 25039516 25039809 -47114073 + AluSx SINE Alu 1 304 -8 448 288 182 28 chr20 25039809 25040039 -47113843 - Charlie7 DNA MER1_type -2254 358 28 227 298 48 10 chr20 25040207 25040311 -47113571 + MIR SINE MIR 31 138 -70 433 231 11 0 chr20 25041617 25041708 -47112174 + MER3 DNA MER1_type 1 92 -117 421 311 0 16 chr20 25042463 25042585 -47111297 - MIR SINE MIR -115 147 28 283 260 20 10 chr20 25045201 25045301 -47108581 + (TG)n Simple_repeat Simple_repeat 1 101 0 234 0 0 0 chr20 25045470 25045496 -47108386 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 288 0 0 0 chr20 25045495 25045527 -47108355 + (CA)n Simple_repeat Simple_repeat 1 32 0 315 319 22 15 chr20 25046788 25046923 -47106959 + HAL1b LINE L1 454 589 -759 1531 264 100 21 chr20 25046933 25047121 -47106761 + L1MEc LINE L1 4108 4280 -2048 2020 147 0 0 chr20 25047121 25047420 -47106462 - AluSx SINE Alu -13 299 1 1531 264 100 21 chr20 25047420 25047954 -47105928 + L1MEc LINE L1 4280 4887 -1441 1188 254 69 15 chr20 25047978 25048335 -47105547 + L1MEc LINE L1 5361 5697 -647 6487 133 73 36 chr20 25048335 25048894 -47104988 - Tigger3b DNA MER2_type -1797 1231 694 2311 112 0 3 chr20 25048894 25049206 -47104676 + AluSx SINE Alu 1 311 -1 6487 133 73 36 chr20 25049206 25049831 -47104051 - Tigger3b DNA MER2_type -2334 694 3 1188 254 69 15 chr20 25049831 25050131 -47103751 + L1MEc LINE L1 5697 6063 -281 360 327 0 0 chr20 25050287 25050397 -47103485 + MER58 DNA MER1_type 173 282 -2138 237 366 60 13 chr20 25050880 25051115 -47102767 - L3 LINE CR1 -19 1558 1313 198 238 24 0 chr20 25052422 25052464 -47101418 + L2 LINE L2 3226 3268 -4 251 211 78 70 chr20 25053075 25053203 -47100679 + L1ME4a LINE L1 6172 6300 -3 999 109 11 6 chr20 25053268 25053327 -47100555 + (GGAA)n Simple_repeat Simple_repeat 1 235 0 999 109 11 6 chr20 25053327 25053502 -47100380 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 1014 87 6 27 chr20 25053625 25053808 -47100074 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 2715 10 0 10 chr20 25054814 25055153 -47098729 - AluYb8 SINE Alu 0 318 1 2033 207 95 105 chr20 25056773 25057373 -47096509 + MLT1G LTR MaLR 2 590 0 423 263 165 31 chr20 25057724 25057918 -47095964 - MLT1J LTR MaLR -283 228 9 2152 208 61 42 chr20 25058176 25058225 -47095657 - MLT1F LTR MaLR -4 538 491 3725 147 12 7 chr20 25058225 25058811 -47095071 + L1MC1 LINE L1 5745 6333 0 2152 208 61 42 chr20 25058811 25059285 -47094597 - MLT1F LTR MaLR -51 491 5 246 213 53 40 chr20 25060549 25060624 -47093258 + MIR SINE MIR 71 146 -116 262 245 0 0 chr20 25061776 25061829 -47092053 - L2 LINE L2 -6 3307 3255 1031 160 10 36 chr20 25062272 25062466 -47091416 - MER3 DNA MER1_type -16 193 5 21 0 0 0 chr20 25062784 25062805 -47091077 + AT_rich Low_complexity Low_complexity 1 21 0 226 299 256 8 chr20 25063329 25063446 -47090436 - L2 LINE L2 0 3272 3127 251 229 86 0 chr20 25063590 25063660 -47090222 + L1MD2 LINE L1 462 537 -5993 1967 140 3 13 chr20 25063850 25064164 -47089718 - AluJb SINE Alu -1 311 1 2199 253 81 55 chr20 25064215 25065215 -47088667 + L1MD2 LINE L1 1369 2409 -4131 2327 71 0 0 chr20 25065215 25065549 -47088333 + AluY SINE Alu 1 334 0 2199 253 81 55 chr20 25065549 25065753 -47088129 + L1MD2 LINE L1 2409 2606 -3934 2505 204 109 12 chr20 25065753 25066322 -47087560 + MLT1E3 LTR MaLR 1 624 0 6358 229 60 46 chr20 25066324 25066843 -47087039 + L1MD2 LINE L1 2613 3123 -3417 2122 137 0 0 chr20 25066843 25067143 -47086739 - AluSx SINE Alu -12 300 1 6358 229 60 46 chr20 25067143 25068768 -47085114 + L1MD2 LINE L1 3123 4788 -1752 1595 234 137 17 chr20 25068772 25069298 -47084584 + L1MD2 LINE L1 5737 6325 -428 1701 224 63 27 chr20 25069338 25069785 -47084097 - MLT1C LTR MaLR -4 463 1 324 284 47 76 chr20 25069845 25070056 -47083826 - LTR33A LTR ERVL -317 206 2 2670 150 9 40 chr20 25070129 25070576 -47083306 + Tigger2a DNA MER2_type 1 433 -1 411 250 0 0 chr20 25070859 25070943 -47082939 + L2 LINE L2 3217 3300 -13 186 43 0 0 chr20 25070944 25070967 -47082915 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 852 261 100 80 chr20 25071714 25072216 -47081666 + MLT1G3 LTR MaLR 8 595 0 311 304 109 0 chr20 25074707 25074845 -47079037 - MLT1I LTR MaLR -241 168 16 23 33 0 0 chr20 25074974 25075004 -47078878 + AT_rich Low_complexity Low_complexity 1 30 0 2046 153 3 0 chr20 25075113 25075421 -47078461 - AluSx SINE Alu -3 309 1 241 310 0 0 chr20 25076080 25076138 -47077744 + L2 LINE L2 3172 3229 -43 934 185 38 33 chr20 25076619 25076803 -47077079 + AluJo SINE Alu 1 185 -127 21 0 0 0 chr20 25077341 25077362 -47076520 + AT_rich Low_complexity Low_complexity 1 21 0 1763 158 54 0 chr20 25077362 25077641 -47076241 - AluSx SINE Alu -18 294 1 32 26 0 0 chr20 25077675 25077714 -47076168 + AT_rich Low_complexity Low_complexity 1 39 0 1583 170 11 14 chr20 25078480 25078756 -47075126 - AluJo SINE Alu -3 309 35 1719 170 34 7 chr20 25078828 25079122 -47074760 + AluSx SINE Alu 1 302 -10 21 36 0 0 chr20 25079678 25079706 -47074176 + AT_rich Low_complexity Low_complexity 1 28 0 462 234 128 48 chr20 25079788 25079976 -47073906 - MIR SINE MIR -57 205 3 2062 128 0 0 chr20 25080128 25080409 -47073473 + AluSx SINE Alu 1 281 -31 233 182 0 0 chr20 25080409 25080453 -47073429 + L1MC4 LINE L1 6660 6703 -1339 21 36 0 0 chr20 25080464 25080492 -47073390 + AT_rich Low_complexity Low_complexity 1 28 0 244 171 0 133 chr20 25080530 25080635 -47073247 + L1MC4 LINE L1 6613 6703 -1339 270 0 0 0 chr20 25080652 25080682 -47073200 + (TA)n Simple_repeat Simple_repeat 1 30 0 1587 123 139 57 chr20 25081851 25082168 -47071714 + MER61A LTR ERV1 1 343 0 556 256 177 39 chr20 25082859 25083062 -47070820 - MIR SINE MIR -9 253 23 285 260 0 41 chr20 25083300 25083373 -47070509 - L2 LINE L2 -1 3271 3202 828 177 32 65 chr20 25084759 25084903 -47068979 + MER58A DNA MER1_type 45 183 -2237 1750 150 0 0 chr20 25084903 25085156 -47068726 - AluJb SINE Alu -25 287 35 828 177 32 65 chr20 25085156 25085197 -47068685 + MER58A DNA MER1_type 183 224 0 398 270 34 25 chr20 25085483 25085656 -47068226 + L1 LINE L1 3597 3777 -2369 40 67 0 0 chr20 25085769 25085844 -47068038 + AT_rich Low_complexity Low_complexity 1 75 0 21 36 0 0 chr20 25086426 25086454 -47067428 + AT_rich Low_complexity Low_complexity 1 28 0 1699 214 52 87 chr20 25087043 25087698 -47066184 - MLT1G3 LTR MaLR 0 530 1 560 326 135 17 chr20 25087771 25088127 -47065755 - Charlie8 DNA MER1_type -1925 492 95 247 242 0 32 chr20 25089948 25090010 -47063872 + MLT1J LTR MaLR 2 61 -450 626 231 71 53 chr20 25090130 25090227 -47063655 + MLT1J LTR MaLR 238 332 -179 1853 135 9 64 chr20 25090227 25090554 -47063328 + AluJb SINE Alu 1 309 -3 626 231 71 53 chr20 25090554 25090681 -47063201 + MLT1J LTR MaLR 332 466 -45 384 346 27 18 chr20 25090818 25091006 -47062876 + MIR SINE MIR 16 203 -59 387 332 32 45 chr20 25091062 25091309 -47062573 - L3 LINE CR1 -132 1445 1202 480 321 66 64 chr20 25091959 25092159 -47061723 - HAL1b LINE L1 -500 1688 1490 2349 101 10 0 chr20 25092159 25092467 -47061415 - AluSx SINE Alu -1 311 1 480 321 66 64 chr20 25092467 25092779 -47061103 - HAL1b LINE L1 -698 1490 387 324 0 0 0 chr20 25093365 25093401 -47060481 + (TG)n Simple_repeat Simple_repeat 1 36 0 390 221 11 74 chr20 25193955 25194050 -46959832 + MER21B LTR ERV1 1 89 -774 2487 175 120 39 chr20 25194213 25194830 -46959052 + MER21B LTR ERV1 143 809 -54 3302 214 32 11 chr20 25195583 25196294 -46957588 - HsTC2c DNA Tc2 -3 726 1 195 229 0 83 chr20 25198234 25198330 -46955552 - L2 LINE L2 -67 3246 3159 743 89 10 0 chr20 25198759 25198860 -46955022 + AluSp/q SINE Alu 192 293 -20 380 254 25 17 chr20 25200293 25200411 -46953471 + MLT1H LTR MaLR 35 153 -396 352 197 15 153 chr20 25200543 25200680 -46953202 + MLT1J LTR MaLR 430 547 -2 * 355 307 166 24 chr20 25200680 25200969 -46952913 - MLT1K LTR MaLR -72 516 187 267 307 0 0 chr20 25201474 25201549 -46952333 - L1MEc LINE L1 -4829 1567 1493 190 186 23 0 chr20 25201550 25201593 -46952289 + L2 LINE L2 3270 3313 0 223 286 13 39 chr20 25201878 25201955 -46951927 - L2 LINE L2 -7 3306 3232 21 0 0 0 chr20 25202567 25202588 -46951294 + AT_rich Low_complexity Low_complexity 1 21 0 1013 206 17 80 chr20 25202696 25202934 -46950948 + MER58A DNA MER1_type 1 223 -1 329 345 9 9 chr20 25202974 25203090 -46950792 + MER5A DNA MER1_type 43 158 -31 2091 128 3 10 chr20 25204704 25205016 -46948866 - AluSx SINE Alu -2 310 1 21 0 0 0 chr20 25206507 25206528 -46947354 + AT_rich Low_complexity Low_complexity 1 21 0 185 94 31 0 chr20 25206545 25206577 -46947305 + GA-rich Low_complexity Low_complexity 2 34 0 360 237 0 0 chr20 25206629 25206705 -46947177 + MER5A DNA MER1_type 15 90 -99 435 238 61 55 chr20 25208224 25208405 -46945477 - LTR16C LTR ERVL 0 491 310 520 230 54 14 chr20 25208779 25208927 -46944955 + MER5A DNA MER1_type 1 154 -35 769 162 13 13 chr20 25209474 25209628 -46944254 + MER5A DNA MER1_type 1 154 -35 342 261 14 70 chr20 25210365 25210507 -46943375 - MER5A DNA MER1_type -38 151 18 432 268 18 31 chr20 25211806 25212030 -46941852 - L1MC5 LINE L1 -279 7682 7462 32 26 0 0 chr20 25212185 25212224 -46941658 + AT_rich Low_complexity Low_complexity 1 39 0 537 244 157 28 chr20 25213662 25213879 -46940003 - MIR SINE MIR 0 262 18 190 288 114 23 chr20 25214220 25214352 -46939530 - L2 LINE L2 -909 2405 2262 336 227 209 36 chr20 25214541 25214766 -46939116 + LTR33 LTR ERVL 256 519 -2 799 223 108 52 chr20 25214910 25215197 -46938685 + MLT1J LTR MaLR 100 402 -109 21 36 0 0 chr20 25216072 25216100 -46937782 + AT_rich Low_complexity Low_complexity 1 28 0 291 313 48 29 chr20 25216648 25216808 -46937074 + MIR SINE MIR 9 179 -29 451 255 82 62 chr20 25217064 25217151 -46936731 + MIR SINE MIR 1 85 -177 2609 82 19 25 chr20 25217151 25217517 -46936365 - THE1B LTR MaLR 0 364 1 12407 81 4 6 chr20 25217517 25217595 -46936287 - THE1B-int LTR MaLR 0 1580 1503 2326 109 3 0 chr20 25217595 25217897 -46935985 - AluSq SINE Alu -10 303 1 12407 81 4 6 chr20 25217897 25219401 -46934481 - THE1B-int LTR MaLR -77 1503 1 2401 108 19 35 chr20 25219401 25219771 -46934111 - THE1B LTR MaLR 0 364 1 451 255 82 62 chr20 25219771 25219889 -46933993 + MIR SINE MIR 84 212 -50 225 333 108 10 chr20 25221176 25221278 -46932604 + MIR SINE MIR 19 130 -78 211 277 75 11 chr20 25221566 25221660 -46932222 + L2 LINE L2 2631 2730 -584 734 157 239 0 chr20 25221671 25221830 -46932052 - MER3 DNA MER1_type 0 209 13 427 287 188 81 chr20 25221862 25222304 -46931578 + L2 LINE L2 2824 3312 -1 185 292 0 0 chr20 25222836 25222884 -46930998 + MIR3 SINE MIR 158 205 -3 1549 183 0 11 chr20 25223438 25223711 -46930171 + AluJo SINE Alu 25 294 -18 836 120 0 0 chr20 25224638 25224776 -46929106 + FLAM_A SINE Alu 11 148 0 279 93 0 0 chr20 25225470 25225513 -46928369 + (CA)n Simple_repeat Simple_repeat 1 43 0 1282 134 65 9 chr20 25226614 25226830 -46927052 - MER30 DNA MER1_type 0 230 3 588 242 62 6 chr20 25226997 25227158 -46926724 - MER5B DNA MER1_type -6 172 3 184 264 38 0 chr20 25227211 25227264 -46926618 - MER5A DNA MER1_type -7 182 128 637 101 9 9 chr20 25227322 25227431 -46926451 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 236 279 0 0 chr20 25228021 25228082 -46925800 - MER5A DNA MER1_type -120 69 9 754 116 14 14 chr20 25228109 25228247 -46925635 + (TCCCC)n Simple_repeat Simple_repeat 4 141 0 481 291 22 56 chr20 25228906 25229174 -46924708 - HAL1 LINE L1 -3 2504 2246 214 371 17 9 chr20 25229496 25229612 -46924270 + L3 LINE CR1 900 1016 -561 1947 297 19 6 chr20 25229809 25230348 -46923534 + MLT1H1 LTR MaLR 10 555 0 306 0 0 0 chr20 25230439 25230473 -46923409 + (CA)n Simple_repeat Simple_repeat 1 34 0 388 332 51 56 chr20 25231059 25231371 -46922511 + HAL1b LINE L1 387 652 -696 2377 97 10 0 chr20 25231371 25231680 -46922202 + AluSx SINE Alu 1 312 0 388 332 51 56 chr20 25231680 25231877 -46922005 + HAL1b LINE L1 652 848 -500 328 332 32 45 chr20 25232527 25232774 -46921108 + L3 LINE CR1 1202 1445 -132 344 341 29 18 chr20 25232830 25233000 -46920882 - MIR SINE MIR -59 203 32 625 231 71 53 chr20 25233155 25233282 -46920600 - MLT1J LTR MaLR -45 466 332 1843 136 9 65 chr20 25233282 25233606 -46920276 - AluJb SINE Alu -6 306 1 625 231 71 53 chr20 25233606 25233703 -46920179 - MLT1J LTR MaLR -179 332 238 250 242 0 32 chr20 25233823 25233885 -46919997 - MLT1J LTR MaLR -450 61 2 561 321 131 22 chr20 25235692 25236059 -46917823 + Charlie8 DNA MER1_type 86 492 -1925 1716 216 66 66 chr20 25236132 25236787 -46917095 + MLT1G3 LTR MaLR 1 555 0 21 36 0 0 chr20 25237373 25237401 -46916481 + AT_rich Low_complexity Low_complexity 1 28 0 40 67 0 0 chr20 25237983 25238058 -46915824 + AT_rich Low_complexity Low_complexity 1 75 0 393 270 34 25 chr20 25238171 25238344 -46915538 - L1 LINE L1 -2369 3777 3597 819 177 32 65 chr20 25238630 25238671 -46915211 - MER58A DNA MER1_type -2196 224 183 1771 150 0 0 chr20 25238671 25238924 -46914958 + AluJb SINE Alu 35 287 -25 819 177 32 65 chr20 25238924 25239068 -46914814 - MER58A DNA MER1_type -2237 183 45 261 260 0 41 chr20 25240454 25240527 -46913355 + L2 LINE L2 3202 3271 -1 495 256 177 39 chr20 25240765 25240968 -46912914 + MIR SINE MIR 23 253 -9 1485 123 139 57 chr20 25241659 25241976 -46911906 - MER61A LTR ERV1 0 343 1 226 278 0 0 chr20 25243146 25243236 -46910646 - L1MC4 LINE L1 -1339 6703 6614 253 270 22 0 chr20 25243246 25243335 -46910547 - L1MC4 LINE L1 -1339 6703 6613 21 36 0 0 chr20 25243373 25243401 -46910481 + AT_rich Low_complexity Low_complexity 1 28 0 226 182 0 0 chr20 25243412 25243456 -46910426 - L1MC4 LINE L1 -1339 6703 6660 2114 125 0 0 chr20 25243456 25243737 -46910145 - AluSx SINE Alu -31 281 1 405 234 128 48 chr20 25243889 25244077 -46909805 + MIR SINE MIR 3 205 -57 21 36 0 0 chr20 25244159 25244187 -46909695 + AT_rich Low_complexity Low_complexity 1 28 0 1705 172 34 7 chr20 25244743 25245034 -46908848 - AluSx SINE Alu -13 299 1 1594 170 11 14 chr20 25245106 25245382 -46908500 + AluJo SINE Alu 35 309 -3 32 26 0 0 chr20 25246148 25246187 -46907695 + AT_rich Low_complexity Low_complexity 1 39 0 1750 161 54 0 chr20 25246221 25246500 -46907382 + AluSx SINE Alu 1 294 -18 26 0 0 0 chr20 25246500 25246526 -46907356 + AT_rich Low_complexity Low_complexity 1 26 0 930 183 38 43 chr20 25247064 25247250 -46906632 - AluJo SINE Alu -127 185 1 217 293 0 0 chr20 25247731 25247789 -46906093 - L2 LINE L2 -43 3229 3172 2069 149 3 0 chr20 25248448 25248756 -46905126 + AluSx SINE Alu 1 309 -3 23 33 0 0 chr20 25248865 25248895 -46904987 + AT_rich Low_complexity Low_complexity 1 30 0 315 304 109 0 chr20 25249024 25249162 -46904720 + MLT1I LTR MaLR 16 168 -241 858 261 100 80 chr20 25251657 25252159 -46901723 - MLT1G3 LTR MaLR 0 595 8 186 43 0 0 chr20 25252906 25252929 -46900953 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 383 250 0 0 chr20 25252930 25253014 -46900868 - L2 LINE L2 -13 3300 3217 2566 148 9 40 chr20 25253297 25253744 -46900138 - Tigger2a DNA MER2_type -1 433 1 321 284 47 76 chr20 25253817 25254028 -46899854 + LTR33A LTR ERVL 2 206 -317 1601 221 63 27 chr20 25254088 25254535 -46899347 + MLT1C LTR MaLR 1 463 -4 2078 198 136 11 chr20 25254581 25255111 -46898771 - L1ME2 LINE L1 -240 6318 5723 * 6188 229 60 46 chr20 25255105 25256730 -46897152 - L1ME2 LINE L1 -1752 4788 3123 2117 141 0 0 chr20 25256730 25257029 -46896853 + AluSx SINE Alu 1 299 -13 6188 229 60 46 chr20 25257029 25257548 -46896334 - L1ME2 LINE L1 -3417 3123 2613 2505 204 109 12 chr20 25257550 25258119 -46895763 - MLT1E3 LTR MaLR 0 624 1 2112 256 80 54 chr20 25258119 25258323 -46895559 - L1ME2 LINE L1 -3934 2606 2409 2343 71 0 0 chr20 25258323 25258632 -46895250 - AluY SINE Alu 0 309 1 2112 256 80 54 chr20 25258632 25259632 -46894250 - L1ME2 LINE L1 -4131 2409 1369 1994 137 3 13 chr20 25259683 25259997 -46893885 + AluJb SINE Alu 1 311 -1 247 229 86 0 chr20 25260189 25260259 -46893623 - L1ME2 LINE L1 -5993 537 462 192 299 256 8 chr20 25260403 25260520 -46893362 + L2 LINE L2 3127 3272 0 21 0 0 0 chr20 25261044 25261065 -46892817 + AT_rich Low_complexity Low_complexity 1 21 0 1027 160 10 36 chr20 25261383 25261577 -46892305 + MER3 DNA MER1_type 5 193 -16 247 245 0 0 chr20 25262020 25262073 -46891809 + L2 LINE L2 3255 3307 -6 222 213 53 40 chr20 25263225 25263300 -46890582 - MIR SINE MIR -116 146 71 2171 208 61 42 chr20 25264565 25265039 -46888843 + MLT1F LTR MaLR 5 491 -51 3560 147 12 7 chr20 25265039 25265625 -46888257 - L1MC1 LINE L1 0 6333 5745 2171 208 61 42 chr20 25265625 25265674 -46888208 + MLT1F LTR MaLR 491 538 -4 420 255 99 37 chr20 25265932 25266093 -46887789 + MLT1J LTR MaLR 9 179 -332 2049 207 95 105 chr20 25266477 25267077 -46886805 - MLT1G LTR MaLR 0 590 2 2750 10 0 10 chr20 25268697 25269036 -46884846 + AluYb8 SINE Alu 1 318 0 195 42 0 0 chr20 25269864 25269888 -46883994 + (CCTG)n Simple_repeat Simple_repeat 1 24 0 794 184 6 0 chr20 25269888 25270062 -46883820 + CT-rich Low_complexity Low_complexity 1 175 0 1014 111 6 11 chr20 25270067 25270247 -46883635 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 1011 109 11 6 chr20 25270248 25270366 -46883516 + (TTCC)n Simple_repeat Simple_repeat 1 294 0 1011 109 11 6 chr20 25270366 25270541 -46883341 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 248 203 78 70 chr20 25270661 25270789 -46883093 - L1ME4a LINE L1 -3 6118 5990 185 238 24 0 chr20 25271400 25271442 -46882440 - L2 LINE L2 -4 3268 3226 223 364 34 0 chr20 25272866 25272984 -46880898 + L3 LINE CR1 1437 1558 -19 359 327 0 0 chr20 25273467 25273577 -46880305 - MER58 DNA MER1_type -2138 282 173 1200 252 69 15 chr20 25273733 25274033 -46879849 - L1ME3A LINE L1 -281 5881 5599 6147 136 73 35 chr20 25274033 25274658 -46879224 + Tigger3b DNA MER2_type 3 603 -2425 2301 115 0 3 chr20 25274658 25274970 -46878912 - AluSx SINE Alu -1 311 1 6147 136 73 35 chr20 25274970 25275529 -46878353 + Tigger3b DNA MER2_type 603 1231 0 1200 252 69 15 chr20 25275529 25275886 -46877996 - L1ME3A LINE L1 -563 5599 5179 1484 263 100 21 chr20 25275910 25276444 -46877438 - L1ME3A LINE L1 -1441 4705 4098 2044 147 0 0 chr20 25276444 25276743 -46877139 + AluSx SINE Alu 1 299 -13 1484 263 100 21 chr20 25276743 25276931 -46876951 - L1ME3A LINE L1 -2048 4098 3926 310 319 22 15 chr20 25276941 25277076 -46876806 - HAL1b LINE L1 -759 589 454 306 0 0 0 chr20 25278337 25278371 -46875511 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr20 25278370 25278394 -46875488 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 283 260 20 10 chr20 25278557 25278657 -46875225 + (CA)n Simple_repeat Simple_repeat 1 101 0 383 307 7 2 chr20 25281269 25281397 -46872485 + MIR SINE MIR 20 150 -58 436 231 11 0 chr20 25282150 25282241 -46871641 - MER3 DNA MER1_type -117 92 1 202 298 48 10 chr20 25283547 25283651 -46870231 - MIR SINE MIR -70 138 31 568 307 176 19 chr20 25283819 25284048 -46869834 + Charlie7 DNA MER1_type 28 220 -2392 2047 126 38 0 chr20 25284048 25284341 -46869541 - AluSx SINE Alu -8 304 1 568 307 176 19 chr20 25284341 25284544 -46869338 + Charlie7 DNA MER1_type 220 528 -2084 280 305 42 8 chr20 25284560 25284678 -46869204 - LTR67 LTR ERVL -4 553 432 316 253 21 32 chr20 25285209 25285304 -46868578 + Charlie7 DNA MER1_type 546 639 -1973 281 179 39 51 chr20 25285320 25285398 -46868484 - MER46C DNA MER2_type 0 338 262 4478 235 74 47 chr20 25285399 25286864 -46867018 + L1MEc LINE L1 70 1573 -4823 1425 196 61 77 chr20 25287072 25287450 -46866432 + MLT1A2 LTR MaLR 1 372 -2 2507 153 30 35 chr20 25287749 25288162 -46865720 - MSTB2 LTR MaLR 0 457 45 1667 180 0 26 chr20 25288162 25288467 -46865415 + AluJb SINE Alu 4 300 -12 2507 153 30 35 chr20 25288467 25288512 -46865370 - MSTB2 LTR MaLR -412 45 1 200 57 0 29 chr20 25288576 25288611 -46865271 + (TTA)n Simple_repeat Simple_repeat 3 36 0 12547 27 0 1 chr20 25288611 25290813 -46863069 - L1PA3 LINE L1 -18 6137 3937 1071 90 0 0 chr20 25290813 25290946 -46862936 + AluSg/x SINE Alu 155 287 -23 2149 108 11 0 chr20 25290953 25291231 -46862651 - AluSx SINE Alu -31 281 1 238 367 50 0 chr20 25291232 25291352 -46862530 + MIR SINE MIR 90 215 -47 274 173 39 0 chr20 25292468 25292520 -46861362 - MLT1K LTR MaLR -1 587 534 737 231 12 0 chr20 25293247 25293416 -46860466 + HAL1 LINE L1 1422 1592 -915 2257 100 162 5 chr20 25293419 25293789 -46860093 + MSTA LTR MaLR 1 428 0 1072 231 88 63 chr20 25293819 25294377 -46859505 + L1MC5 LINE L1 7119 7690 -271 589 52 104 0 chr20 25294381 25294592 -46859290 + (TA)n Simple_repeat Simple_repeat 1 232 0 578 203 122 40 chr20 25294592 25294814 -46859068 + L1MC5 LINE L1 7678 7917 -44 502 247 161 36 chr20 25294975 25295311 -46858571 + HAL1 LINE L1 1927 2304 -203 * 562 173 0 58 chr20 25295285 25295424 -46858458 + L1MC5 LINE L1 7730 7860 -101 2192 225 23 21 chr20 25295830 25296369 -46857513 + MLT1G LTR MaLR 10 553 -2 303 336 17 9 chr20 25297389 25297505 -46856377 - Tigger8 DNA MER2_type -2 664 548 462 290 118 42 chr20 25297861 25298154 -46855728 - L1ME4a LINE L1 -209 5912 5648 517 254 176 51 chr20 25298338 25299037 -46854845 - L1MC2 LINE L1 -180 5941 5209 376 58 87 14 chr20 25299041 25299110 -46854772 - L1MC2 LINE L1 -7 6337 6264 383 172 0 0 chr20 25299111 25299175 -46854707 + FLAM SINE Alu 65 128 -5 4431 143 76 21 chr20 25299175 25300019 -46853863 - L1MC2 LINE L1 -67 6277 5388 23 33 0 0 chr20 25300025 25300055 -46853827 + AT_rich Low_complexity Low_complexity 1 30 0 419 228 141 0 chr20 25300057 25300149 -46853733 - FLAM_A SINE Alu -34 108 4 764 288 116 54 chr20 25300152 25301402 -46852480 - L1MC2 LINE L1 -760 5386 4060 346 103 0 0 chr20 25301799 25301857 -46852025 + Alu SINE Alu 245 302 0 263 193 0 7 chr20 25302153 25302214 -46851668 - L2 LINE L2 -365 2907 2852 1706 190 21 7 chr20 25302484 25302963 -46850919 + L1M2 LINE L1 5032 5515 -751 376 240 100 33 chr20 25302969 25303119 -46850763 + MER90 LTR ERV1 454 613 -1 378 329 19 32 chr20 25303563 25303721 -46850161 + L2 LINE L2 2634 2789 -525 1336 183 25 40 chr20 25304129 25304389 -46849493 - MER33 DNA MER1_type -2261 324 68 1870 141 3 7 chr20 25304389 25304695 -46849187 - AluSx SINE Alu -7 305 1 1336 183 25 40 chr20 25304695 25304756 -46849126 - MER33 DNA MER1_type -2517 68 8 268 216 54 68 chr20 25304782 25304856 -46849026 + MIR3 SINE MIR 115 187 -21 1376 204 33 60 chr20 25304954 25305352 -46848530 - L1MC4 LINE L1 -661 7381 6995 27 0 0 0 chr20 25305558 25305585 -46848297 + AT_rich Low_complexity Low_complexity 1 27 0 1520 159 24 30 chr20 25306678 25306973 -46846909 - AluJo SINE Alu -19 293 1 618 309 14 24 chr20 25307263 25307470 -46846412 - MIR SINE MIR 0 262 58 2127 114 0 0 chr20 25308185 25308483 -46845399 - AluSx SINE Alu -14 298 1 1111 297 104 14 chr20 25309408 25309849 -46844033 + MLT1J LTR MaLR 28 508 -3 629 289 64 0 chr20 25309932 25310136 -46843746 + MIR SINE MIR 9 225 -37 1484 156 78 21 chr20 25310415 25310697 -46843185 + AluJo SINE Alu 1 298 -14 1368 85 0 4 chr20 25311287 25311747 -46842135 + (TGGA)n Simple_repeat Simple_repeat 1 458 0 24 0 0 0 chr20 25313305 25313329 -46840553 + AT_rich Low_complexity Low_complexity 1 24 0 1728 112 0 89 chr20 25313520 25313833 -46840049 - AluJo SINE Alu -11 301 17 463 144 0 44 chr20 25314405 25314495 -46839387 + L1MC2 LINE L1 5975 6060 -284 216 344 0 0 chr20 25316848 25316909 -46836973 - MIR SINE MIR -96 166 106 2229 91 13 0 chr20 25316916 25317223 -46836659 - AluSx SINE Alu -1 311 1 5885 137 15 16 chr20 25318469 25319477 -46834405 + L1MA3 LINE L1 5293 6304 -1 1722 122 0 4 chr20 25319705 25319951 -46833931 + AluSq SINE Alu 1 245 -68 216 0 0 0 chr20 25319951 25319975 -46833907 + (T)n Simple_repeat Simple_repeat 1 24 0 817 158 0 0 chr20 25320088 25320221 -46833661 + AluSg/x SINE Alu 154 286 -23 2079 116 0 0 chr20 25320225 25320510 -46833372 + AluY SINE Alu 1 285 -26 2212 100 0 3 chr20 25320525 25320826 -46833056 + AluSq SINE Alu 1 300 -13 8244 223 51 22 chr20 25320999 25321943 -46831939 + L1M4 LINE L1 2427 3342 -2804 2238 100 0 0 chr20 25321943 25322244 -46831638 + AluSg SINE Alu 1 301 -9 8244 223 51 22 chr20 25322244 25322696 -46831186 + L1M4 LINE L1 3342 3779 -2367 1926 157 0 6 chr20 25322696 25323009 -46830873 + AluSx SINE Alu 1 311 -1 8244 223 51 22 chr20 25323009 25323472 -46830410 + L1M4 LINE L1 3779 4227 -1919 2318 169 39 10 chr20 25323472 25323886 -46829996 - MSTB LTR MaLR 0 426 1 8244 223 51 22 chr20 25323886 25324363 -46829519 + L1M4 LINE L1 4227 4834 -1312 4949 147 34 30 chr20 25324369 25324637 -46829245 + L1MB5 LINE L1 3873 4138 -2036 2150 123 0 0 chr20 25324637 25324947 -46828935 + AluSx SINE Alu 1 310 -2 4949 147 34 30 chr20 25324947 25325589 -46828293 + L1MB5 LINE L1 4138 4776 -1398 2118 93 31 3 chr20 25325589 25325878 -46828004 + AluSq SINE Alu 1 297 -16 4949 147 34 30 chr20 25325878 25326312 -46827570 + L1MB5 LINE L1 4776 5890 -284 1506 120 74 79 chr20 25326312 25326754 -46827128 - THE1C LTR MaLR 0 375 1 3012 138 9 80 chr20 25326754 25327390 -46826492 + L1MA8 LINE L1 4768 5358 -788 2928 133 67 64 chr20 25327390 25327996 -46825886 + MER6A DNA MER2_type -5 586 -19 3348 144 28 31 chr20 25328002 25328516 -46825366 + L1MA8 LINE L1 5369 5882 -409 1968 125 20 3 chr20 25328516 25328811 -46825071 + AluSx SINE Alu 1 300 -12 3348 144 28 31 chr20 25328811 25328908 -46824974 + L1MA8 LINE L1 5882 5978 -313 275 256 111 0 chr20 25333043 25333160 -46820722 + L1MC4 LINE L1 7912 8041 -1 34 0 0 0 chr20 25333377 25333411 -46820471 + AT_rich Low_complexity Low_complexity 1 34 0 2162 109 3 0 chr20 25333415 25333727 -46820155 + AluSp SINE Alu 1 313 0 1748 163 56 0 chr20 25333785 25334105 -46819777 + L1MB3 LINE L1 5844 6181 -2 329 109 18 0 chr20 25336827 25336882 -46817000 + (GA)n Simple_repeat Simple_repeat 2 57 0 202 211 0 40 chr20 25337226 25337302 -46816580 + GA-rich Low_complexity Low_complexity 1 73 0 340 299 9 46 chr20 25337330 25337650 -46816232 + GA-rich Low_complexity Low_complexity 1 307 0 * 443 294 6 40 chr20 25337532 25337709 -46816173 + G-rich Low_complexity Low_complexity 1 171 0 21 57 0 0 chr20 25338501 25338536 -46815346 + GC_rich Low_complexity Low_complexity 1 35 0 204 263 0 0 chr20 25340832 25340889 -46812993 + (CGG)n Simple_repeat Simple_repeat 2 58 0 36 70 0 0 chr20 25340940 25341011 -46812871 + GC_rich Low_complexity Low_complexity 1 71 0 38 0 0 0 chr20 25341167 25341205 -46812677 + GC_rich Low_complexity Low_complexity 1 38 0 34 0 0 0 chr20 25341369 25341403 -46812479 + GC_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr20 25342717 25342749 -46811133 + AT_rich Low_complexity Low_complexity 1 32 0 212 218 18 36 chr20 25345934 25345989 -46807893 + MIR SINE MIR 98 151 -111 1158 213 33 0 chr20 25349048 25349259 -46804623 + MER58A DNA MER1_type 2 219 -5 1985 133 6 22 chr20 25349452 25349769 -46804113 - AluSx SINE Alu 0 312 1 1847 163 7 3 chr20 25349794 25350101 -46803781 - AluJo SINE Alu -4 308 1 1851 128 0 51 chr20 25350371 25350684 -46803198 - AluSx SINE Alu 0 312 16 296 264 208 5 chr20 25351096 25351245 -46802637 + MER5A DNA MER1_type 4 189 0 266 333 20 0 chr20 25351496 25351595 -46802287 - MIR SINE MIR -44 218 118 258 156 0 0 chr20 25352208 25352253 -46801629 + T-rich Low_complexity Low_complexity 1 45 0 1285 82 0 0 chr20 25352255 25352425 -46801457 - AluSg/x SINE Alu -1 311 142 22 0 0 0 chr20 25352717 25352739 -46801143 + AT_rich Low_complexity Low_complexity 1 22 0 401 259 79 14 chr20 25352880 25353019 -46800863 + MIR SINE MIR 17 164 -98 552 270 0 22 chr20 25353025 25353162 -46800720 + LTR67 LTR ERVL 5 138 -419 426 289 42 26 chr20 25353385 25353575 -46800307 + LTR67 LTR ERVL 349 541 -16 2156 104 0 16 chr20 25353675 25353993 -46799889 - AluSq SINE Alu 0 313 1 610 214 131 52 chr20 25354041 25354485 -46799397 + MLT1G LTR MaLR 10 585 -5 1547 177 3 27 chr20 25354586 25354886 -46798996 - AluJb SINE Alu -19 293 1 190 259 165 89 chr20 25354886 25355044 -46798838 - MIR SINE MIR -58 204 35 1677 215 121 38 chr20 25355150 25355635 -46798247 - MLT1F LTR MaLR 0 590 1 392 300 65 40 chr20 25356109 25356130 -46797752 + L1MC4a LINE L1 5585 5604 -517 1719 183 28 79 chr20 25356130 25356524 -46797358 - MLT1A2 LTR MaLR 0 374 1 392 300 65 40 chr20 25356524 25356747 -46797135 + L1MC4a LINE L1 5604 5823 -298 1993 116 14 0 chr20 25356853 25357145 -46796737 - AluSx SINE Alu -16 296 1 2373 65 0 3 chr20 25359217 25359526 -46794356 + AluY SINE Alu 1 308 -3 185 300 38 50 chr20 25359560 25359640 -46794242 + MIR3 SINE MIR 78 156 -52 282 325 71 19 chr20 25360729 25360883 -46792999 + MER5A DNA MER1_type 28 189 0 1389 141 37 8 chr20 25366547 25366788 -46787094 + AluJb SINE Alu 45 292 -20 189 0 0 0 chr20 25367037 25367058 -46786824 + (A)n Simple_repeat Simple_repeat 1 21 0 351 265 12 0 chr20 25370907 25370990 -46782892 - L2 LINE L2 -25 3288 3205 604 211 53 20 chr20 25371057 25371209 -46782673 + MER106B DNA MER1_type 896 1052 -7 2177 90 13 7 chr20 25371210 25371510 -46782372 + AluSq SINE Alu 1 302 -11 28 29 0 0 chr20 25372684 25372719 -46781163 + AT_rich Low_complexity Low_complexity 1 35 0 2103 212 29 15 chr20 25372876 25373357 -46780525 + L1MB8 LINE L1 5689 6176 -2 535 277 201 51 chr20 25374895 25375450 -46778432 + L2 LINE L2 2659 3310 -3 657 183 43 86 chr20 25378268 25378454 -46775428 + MER5B DNA MER1_type 1 178 0 1581 178 0 4 chr20 25378777 25379053 -46774829 + AluJb SINE Alu 1 275 -37 312 231 83 50 chr20 25379224 25379345 -46774537 + MIR3 SINE MIR 74 198 -10 212 264 14 14 chr20 25380873 25380945 -46772937 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 736 228 23 65 chr20 25385612 25385827 -46768055 - MER3 DNA MER1_type 0 209 4 237 149 21 43 chr20 25385980 25386027 -46767855 + MLT1F1 LTR MaLR 73 118 -449 817 129 0 0 chr20 25387772 25387888 -46765994 + FLAM_A SINE Alu 20 135 -7 196 175 75 0 chr20 25388176 25388216 -46765666 - MIR SINE MIR -114 148 106 * 267 307 64 36 chr20 25388181 25388321 -46765561 + MIR SINE MIR 70 213 -49 292 250 69 58 chr20 25388480 25388615 -46765267 - MIR SINE MIR -62 146 39 605 199 133 20 chr20 25389392 25389543 -46764339 - MLT1C LTR MaLR 0 467 300 535 257 78 37 chr20 25389580 25389798 -46764084 - MLT1C LTR MaLR -262 243 17 575 318 111 15 chr20 25390074 25390877 -46763005 + L1MB8 LINE L1 5031 5921 -257 1694 163 0 3 chr20 25390885 25391187 -46762695 - AluJo SINE Alu 0 301 1 333 299 82 69 chr20 25391983 25392214 -46761668 - L2 LINE L2 -2 3311 3078 4826 164 23 30 chr20 25393150 25393536 -46760346 + L1MB7 LINE L1 5188 5575 -609 2228 81 3 0 chr20 25393536 25393851 -46760031 + AluSp SINE Alu 1 316 0 4826 164 23 30 chr20 25393851 25394451 -46759431 + L1MB7 LINE L1 5575 6168 -16 1456 159 110 4 chr20 25394464 25394728 -46759154 + AluJo SINE Alu 1 292 -20 214 322 138 0 chr20 25394912 25394999 -46758883 - L2 LINE L2 -35 3237 3139 981 33 16 0 chr20 25396838 25396960 -46756922 + L1PA4 LINE L1 6032 6155 0 935 51 0 0 chr20 25396845 25396962 -46756920 + L1PA4 LINE L1 6039 6155 0 24 0 0 0 chr20 25397089 25397113 -46756769 + AT_rich Low_complexity Low_complexity 1 24 0 330 289 51 11 chr20 25399049 25399247 -46754635 - MIR SINE MIR -54 208 2 447 174 0 0 chr20 25400859 25400945 -46752937 + (CCCA)n Simple_repeat Simple_repeat 2 87 0 225 318 61 30 chr20 25401285 25401417 -46752465 - MIR SINE MIR -126 136 1 242 279 86 29 chr20 25402132 25402272 -46751610 + MIR3 SINE MIR 18 165 -43 287 248 163 8 chr20 25402346 25402475 -46751407 - LTR50 LTR ERVL -643 152 4 1208 130 47 0 chr20 25403779 25403971 -46749911 + L1MA7 LINE L1 6075 6275 -16 359 248 108 39 chr20 25405289 25405418 -46748464 - MIR SINE MIR -25 237 100 244 33 0 0 chr20 25405428 25405458 -46748424 - MER116 DNA Mariner -49 31 2 1693 184 3 3 chr20 25406801 25407089 -46746793 + AluJb SINE Alu 1 288 -24 297 197 167 0 chr20 25408149 25408215 -46745667 + MER116 DNA Mariner 1 77 -3 582 256 192 20 chr20 25409397 25410007 -46743875 + L2 LINE L2 2455 3224 -89 1652 187 140 16 chr20 25410177 25410621 -46743261 + Charlie4a DNA MER1_type 3 501 -7 183 339 0 0 chr20 25411203 25411268 -46742614 - MIR SINE MIR -58 150 86 2054 142 0 0 chr20 25411365 25411660 -46742222 - AluJb SINE Alu -17 295 1 446 280 190 9 chr20 25414224 25414435 -46739447 + MIR SINE MIR 1 249 -13 198 331 88 0 chr20 25415784 25415914 -46737968 + MIR SINE MIR 22 133 -75 199 209 60 45 chr20 25415981 25416048 -46737834 - L3 LINE CR1 -15 1562 1495 556 243 59 24 chr20 25416104 25416273 -46737609 + MER5B DNA MER1_type 1 175 -3 189 74 0 0 chr20 25416597 25416624 -46737258 + (CA)n Simple_repeat Simple_repeat 2 28 0 437 205 172 26 chr20 25416629 25416780 -46737102 - L1ME3A LINE L1 -50 6120 5948 466 222 52 34 chr20 25416782 25416917 -46736965 - L1ME3A LINE L1 -567 5595 5466 1860 177 96 10 chr20 25416917 25417388 -46736494 + MER44D DNA MER2_type 5 605 0 404 40 0 0 chr20 25418569 25418619 -46735263 + MADE1 DNA Mariner 31 80 0 194 323 0 32 chr20 25418694 25418756 -46735126 + MIR SINE MIR 148 207 -55 305 171 23 114 chr20 25419755 25419843 -46734039 - MER116 DNA Mariner 0 80 1 266 311 99 13 chr20 25422700 25422851 -46731031 + MIR SINE MIR 20 183 -79 976 309 94 23 chr20 25422893 25423369 -46730513 + Tigger8 DNA MER2_type 39 548 -118 22 35 0 0 chr20 25423941 25423970 -46729912 + AT_rich Low_complexity Low_complexity 1 29 0 390 225 67 33 chr20 25425069 25425189 -46728693 + MIR SINE MIR 14 137 -125 249 225 135 0 chr20 25425261 25425350 -46728532 + MIR SINE MIR 136 236 -26 281 315 65 9 chr20 25425877 25425985 -46727897 + L2 LINE L2 3159 3272 0 27 49 0 0 chr20 25426991 25427032 -46726850 + AT_rich Low_complexity Low_complexity 1 41 0 256 306 180 0 chr20 25428389 25428500 -46725382 - L2 LINE L2 -5 3267 3137 370 213 188 61 chr20 25428629 25428906 -46724976 + MLT1H1 LTR MaLR 65 376 -179 583 168 298 0 chr20 25428986 25429117 -46724765 - FAM SINE Alu -15 170 1 634 267 75 31 chr20 25429164 25429419 -46724463 + Charlie7 DNA MER1_type 61 326 -2286 849 222 0 30 chr20 25429461 25429659 -46724223 + Charlie7 DNA MER1_type 1490 1681 -931 618 270 79 4 chr20 25430296 25430537 -46723345 + Charlie7 DNA MER1_type 1761 2019 -593 509 77 83 12 chr20 25430560 25430728 -46723154 + (TA)n Simple_repeat Simple_repeat 1 180 0 707 174 0 22 chr20 25430840 25431024 -46722858 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr20 25431033 25431055 -46722827 + AT_rich Low_complexity Low_complexity 1 22 0 1321 221 82 43 chr20 25431062 25431574 -46722308 + Charlie7 DNA MER1_type 2043 2574 -38 219 135 177 73 chr20 25432387 25432483 -46721399 - MIR SINE MIR -56 206 101 322 257 14 0 chr20 25437016 25437090 -46716792 - L2 LINE L2 -18 3295 3221 441 0 0 0 chr20 25437297 25437346 -46716536 + (CA)n Simple_repeat Simple_repeat 1 49 0 188 399 49 28 chr20 25437924 25438067 -46715815 - L3 LINE CR1 -51 1526 1381 446 256 113 95 chr20 25438267 25438541 -46715341 - Charlie8 DNA MER1_type -2138 279 1 208 310 14 0 chr20 25438544 25438615 -46715267 - L3 LINE CR1 -191 1386 1315 1218 331 132 28 chr20 25438666 25439698 -46714184 - L3 LINE CR1 -407 1170 32 288 0 0 0 chr20 25439710 25439742 -46714140 + (ATTG)n Simple_repeat Simple_repeat 1 32 0 408 20 0 0 chr20 25441089 25441138 -46712744 + (TG)n Simple_repeat Simple_repeat 2 50 0 275 236 14 0 chr20 25441248 25441320 -46712562 + L2 LINE L2 3193 3265 -7 1034 155 35 0 chr20 25442742 25442916 -46710966 - MER45 DNA AcHobo 0 1581 1402 198 0 0 0 chr20 25443562 25443584 -46710298 + (T)n Simple_repeat Simple_repeat 1 22 0 29 0 0 0 chr20 25444788 25444817 -46709065 + AT_rich Low_complexity Low_complexity 1 29 0 1008 162 52 0 chr20 25445640 25445813 -46708069 - AluJo SINE Alu -22 290 109 2156 272 143 16 chr20 25446029 25447171 -46706711 - L2 LINE L2 0 3313 2041 28 0 0 0 chr20 25447237 25447265 -46706617 + AT_rich Low_complexity Low_complexity 1 28 0 246 269 43 43 chr20 25447301 25447394 -46706488 - L2 LINE L2 -10 3303 3211 3000 240 73 57 chr20 25447394 25448822 -46705060 + L1ME3A LINE L1 3671 5144 -1002 423 0 0 0 chr20 25448822 25448869 -46705013 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 3000 240 73 57 chr20 25448869 25448939 -46704943 + L1ME3A LINE L1 5144 5211 -935 1051 308 22 7 chr20 25448940 25449356 -46704526 + L1ME3A LINE L1 5719 6140 -30 2180 277 87 49 chr20 25449383 25449534 -46704348 + L1M4 LINE L1 2584 2728 -3418 1239 185 86 40 chr20 25449534 25449738 -46704144 + MER58B DNA MER1_type 1 227 -2193 1949 145 0 7 chr20 25449738 25450035 -46703847 - AluSx SINE Alu -17 295 1 1239 185 86 40 chr20 25450035 25450155 -46703727 + MER58B DNA MER1_type 227 340 -1 2180 277 87 49 chr20 25450155 25450637 -46703245 + L1M4 LINE L1 2728 3190 -2956 2284 78 10 88 chr20 25450637 25451024 -46702858 + L1PA16 LINE L1 5808 6164 -2 2180 277 87 49 chr20 25451024 25452322 -46701560 + L1M4 LINE L1 3190 4590 -1556 194 305 110 12 chr20 25456102 25456184 -46697698 + L3 LINE CR1 1484 1573 -4 371 314 71 7 chr20 25456947 25457087 -46696795 - MIR SINE MIR -19 243 95 1412 106 35 22 chr20 25457095 25457321 -46696561 - MER30 DNA MER1_type -1 229 1 3737 217 104 75 chr20 25457372 25458005 -46695877 - L1MCb LINE L1 -3743 2830 2217 1939 166 3 3 chr20 25458005 25458306 -46695576 + AluJb SINE Alu 1 301 -11 3737 217 104 75 chr20 25458306 25459774 -46694108 - L1MCb LINE L1 -4356 2217 793 1994 152 0 10 chr20 25459774 25460077 -46693805 + AluJb SINE Alu 1 300 -12 3737 217 104 75 chr20 25460077 25460126 -46693756 - L1MCb LINE L1 -5780 793 747 1147 187 42 54 chr20 25460126 25460367 -46693515 + MER8 DNA MER2_type 2 239 0 3737 217 104 75 chr20 25460367 25460826 -46693056 - L1MCb LINE L1 -5826 747 5 359 313 152 43 chr20 25460826 25461056 -46692826 + L2 LINE L2 3058 3312 -1 26 30 0 0 chr20 25461606 25461639 -46692243 + AT_rich Low_complexity Low_complexity 1 33 0 360 111 0 0 chr20 25462999 25463062 -46690820 + (CA)n Simple_repeat Simple_repeat 2 64 0 339 352 32 0 chr20 25463229 25463354 -46690528 - MIR3 SINE MIR -65 143 15 485 211 0 28 chr20 25466225 25466334 -46687548 - MIR SINE MIR 0 262 157 450 301 62 48 chr20 25467996 25468205 -46685677 - MIR SINE MIR -5 257 46 39 38 0 0 chr20 25471503 25471556 -46682326 + AT_rich Low_complexity Low_complexity 1 53 0 14247 128 31 17 chr20 25471999 25474382 -46679500 - Tigger1 DNA MER2_type 0 2418 1 482 264 8 8 chr20 25474563 25474692 -46679190 - MIR SINE MIR -36 226 98 322 305 48 53 chr20 25475762 25475949 -46677933 - L1ME4a LINE L1 -1 6120 5935 248 311 19 28 chr20 25476046 25476152 -46677730 - L1ME4a LINE L1 -493 5628 5524 2065 107 0 14 chr20 25476613 25476902 -46676980 + AluSc SINE Alu 25 309 0 192 158 0 0 chr20 25476999 25477037 -46676845 + (TATG)n Simple_repeat Simple_repeat 4 41 0 410 333 68 13 chr20 25477779 25478016 -46675866 - MIR SINE MIR -11 251 2 205 284 0 45 chr20 25478428 25478495 -46675387 + L2 LINE L2 3197 3260 -12 28 0 0 0 chr20 25478820 25478848 -46675034 + AT_rich Low_complexity Low_complexity 1 28 0 360 55 0 0 chr20 25479258 25479313 -46674569 - L1MB4 LINE L1 0 6180 6126 1760 140 10 47 chr20 25479503 25479803 -46674079 - AluSx SINE Alu -23 289 1 227 29 57 0 chr20 25481838 25481873 -46672009 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 213 312 147 52 chr20 25483757 25483988 -46669894 + L2 LINE L2 2952 3204 -68 2099 108 7 3 chr20 25484056 25484352 -46669530 + AluSg SINE Alu 1 297 -13 384 22 0 0 chr20 25484372 25484417 -46669465 + (CA)n Simple_repeat Simple_repeat 2 46 0 5189 153 7 191 chr20 25485522 25487452 -46666430 + L1PA15-16 LINE L1 8 1583 -5266 * 5541 233 42 25 chr20 25487447 25489058 -46664824 + L1PBa LINE L1 2 1639 -5224 * 5759 151 28 14 chr20 25489029 25490209 -46663673 + L1PBb LINE L1 7 1198 -5006 2154 113 0 3 chr20 25490209 25490502 -46663380 - AluSc SINE Alu -17 292 1 204 263 126 42 chr20 25491311 25491406 -46662476 + MIR SINE MIR 47 149 -113 342 320 75 32 chr20 25491676 25491954 -46661928 + L2 LINE L2 1861 2150 -1164 665 207 6 65 chr20 25492024 25492193 -46661689 - FRAM SINE Alu -17 159 1 1227 158 49 20 chr20 25492203 25492450 -46661432 - L1MD2 LINE L1 -16 6343 6090 190 303 97 55 chr20 25492675 25492820 -46661062 + L2 LINE L2 3043 3193 -79 1896 249 57 22 chr20 25494277 25494875 -46659007 + L1ME3A LINE L1 5547 6165 -5 979 193 53 0 chr20 25495628 25495872 -46658010 + L1MA4 LINE L1 6042 6298 -2 2262 78 0 0 chr20 25496122 25496403 -46657479 - AluY SINE Alu -30 281 1 216 158 0 0 chr20 25496800 25496838 -46657044 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 309 177 101 13 chr20 25497424 25497503 -46656379 - MER94 DNA DNA -46 88 3 221 259 103 17 chr20 25498898 25498956 -46654926 - MIR SINE MIR -77 185 123 465 291 22 28 chr20 25499563 25499745 -46654137 + L2 LINE L2 2881 3061 -252 184 354 47 0 chr20 25500240 25500367 -46653515 - L2 LINE L2 -349 2965 2833 1413 189 58 49 chr20 25501631 25501975 -46651907 + MER7A DNA MER2_type 1 345 -1 214 346 9 19 chr20 25502303 25502410 -46651472 + MIR SINE MIR 83 188 -74 219 351 176 0 chr20 25502877 25503042 -46650840 + MIR SINE MIR 50 243 -19 433 321 52 9 chr20 25503190 25503396 -46650486 + MIR SINE MIR 45 262 0 22 35 0 0 chr20 25504379 25504408 -46649474 + AT_rich Low_complexity Low_complexity 1 29 0 882 303 103 30 chr20 25504557 25505023 -46648859 - L2 LINE L2 -785 2529 2030 180 111 0 0 chr20 25505185 25505212 -46648670 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 479 290 125 19 chr20 25505323 25505971 -46647911 + L1M4 LINE L1 2115 2831 -3315 557 304 90 40 chr20 25506084 25506310 -46647572 + L1M4 LINE L1 3109 3322 -2824 2470 68 0 3 chr20 25506310 25506605 -46647277 + AluY SINE Alu 1 294 -17 557 304 90 40 chr20 25506605 25507081 -46646801 + L1M4 LINE L1 3322 3846 -2300 317 238 0 0 chr20 25507491 25507554 -46646328 - MER20 DNA MER1_type -155 64 2 280 247 43 31 chr20 25507555 25507717 -46646165 - L1MC4a LINE L1 -1779 6029 5866 2300 112 0 0 chr20 25509485 25509788 -46644094 + AluSx SINE Alu 1 303 -9 794 288 30 0 chr20 25509919 25510152 -46643730 - MIR SINE MIR 0 262 23 351 188 125 0 chr20 25510686 25510766 -46643116 + MER103 DNA DNA 77 166 0 770 251 136 9 chr20 25510989 25511320 -46642562 - L1ME3A LINE L1 -125 6045 5673 4313 125 39 12 chr20 25511620 25512381 -46641501 - L1MA9 LINE L1 0 6312 5531 357 100 62 25 chr20 25512896 25512976 -46640906 - L1MA9 LINE L1 0 6312 6230 21 0 0 0 chr20 25513203 25513224 -46640658 + AT_rich Low_complexity Low_complexity 1 21 0 799 146 64 23 chr20 25513225 25513372 -46640510 - L1MA9 LINE L1 -756 5535 5379 2798 174 45 8 chr20 25513372 25513901 -46639981 - MER44D DNA MER2_type -1 604 1 799 146 64 23 chr20 25513901 25513924 -46639958 - L1MA9 LINE L1 -912 5379 5358 4321 72 12 38 chr20 25514040 25515199 -46638683 + L1PA5 LINE L1 4114 5302 -852 2008 134 0 10 chr20 25515199 25515491 -46638391 - AluSc SINE Alu -19 290 2 4321 72 12 38 chr20 25515491 25515523 -46638359 + L1PA5 LINE L1 5302 5333 -821 4321 40 0 0 chr20 25515523 25516040 -46637842 + L1PA5 LINE L1 5637 6154 0 4321 72 12 38 chr20 25516040 25516287 -46637595 + L1PA5 LINE L1 5333 6154 0 1343 96 0 6 chr20 25516287 25516464 -46637418 + AluY SINE Alu 1 176 -135 5343 59 3 6 chr20 25516497 25517175 -46636707 + L1PA7 LINE L1 5476 6151 -3 684 188 14 51 chr20 25517360 25517513 -46636369 - FLAM_A SINE Alu 0 148 1 1668 187 3 34 chr20 25517931 25518252 -46635630 + AluJo SINE Alu 1 311 -1 1358 177 107 10 chr20 25519893 25520192 -46633690 - MER7A DNA MER2_type 0 346 21 234 0 0 0 chr20 25520273 25520299 -46633583 + (CA)n Simple_repeat Simple_repeat 1 26 0 2061 99 10 0 chr20 25522140 25522434 -46631448 - L1PB1 LINE L1 0 6151 5855 413 292 43 32 chr20 25522452 25522733 -46631149 + MER113 DNA MER1_type? 174 457 -64 220 284 203 47 chr20 25522770 25522918 -46630964 + MIR SINE MIR 14 144 -64 306 0 0 0 chr20 25525091 25525125 -46628757 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1644 210 0 0 chr20 25525417 25525725 -46628157 + AluJo SINE Alu 1 308 0 1794 181 28 52 chr20 25526132 25526596 -46627286 - L1MB7 LINE L1 -9 6175 5723 686 156 50 25 chr20 25526600 25526760 -46627122 - L1MB7 LINE L1 -746 5434 5271 850 191 0 0 chr20 25526810 25526951 -46626931 - AluSq/x SINE Alu -172 141 1 4671 203 41 13 chr20 25526952 25528144 -46625738 - L1MB7 LINE L1 -861 5285 4060 2388 76 3 0 chr20 25529175 25529466 -46624416 + AluSx SINE Alu 1 292 -20 195 319 83 0 chr20 25529910 25529982 -46623900 - MIR3 SINE MIR -6 202 125 2352 93 0 13 chr20 25530143 25530453 -46623429 - AluSq SINE Alu -7 306 1 290 212 30 0 chr20 25531908 25531992 -46621890 + MIR SINE MIR 69 153 -63 24 0 0 0 chr20 25532067 25532091 -46621791 + AT_rich Low_complexity Low_complexity 1 24 0 928 173 104 20 chr20 25533957 25534159 -46619723 - MER20 DNA MER1_type 0 219 1 216 111 0 0 chr20 25535961 25535997 -46617885 + (CA)n Simple_repeat Simple_repeat 1 36 0 218 250 14 28 chr20 25535999 25536071 -46617811 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 279 302 188 7 chr20 25536761 25536910 -46616972 - MIR3 SINE MIR -1 207 32 25 31 0 0 chr20 25537891 25537923 -46615959 + AT_rich Low_complexity Low_complexity 1 32 0 247 279 57 29 chr20 25538015 25538155 -46615727 - LTR67 LTR ERVL -6 551 408 693 270 82 10 chr20 25538774 25538970 -46614912 - MIR SINE MIR -48 214 5 200 266 93 98 chr20 25539752 25539860 -46614022 + MIR SINE MIR 37 144 -118 732 200 114 0 chr20 25539860 25540000 -46613882 + FRAM SINE Alu 2 157 -9 576 0 0 0 chr20 25540005 25540069 -46613813 + (TAAAA)n Simple_repeat Simple_repeat 4 67 0 200 266 93 98 chr20 25540069 25540168 -46613714 + MIR SINE MIR 148 249 -13 23 54 0 0 chr20 25541003 25541040 -46612842 + AT_rich Low_complexity Low_complexity 1 37 0 191 273 81 126 chr20 25542747 25542945 -46610937 + L2 LINE L2 2554 2742 -572 191 348 45 0 chr20 25543396 25543485 -46610397 - L2 LINE L2 -554 2760 2668 944 82 0 37 chr20 25544476 25544610 -46609272 + AluSg/x SINE Alu 168 296 -14 330 244 114 16 chr20 25544639 25544762 -46609120 + L1ME4a LINE L1 5975 6109 -12 2743 219 47 38 chr20 25545593 25546360 -46607522 - L1ME1 LINE L1 -5 6161 5388 279 323 62 8 chr20 25546363 25546493 -46607389 - L2 LINE L2 -282 3031 2895 851 304 163 18 chr20 25547018 25547455 -46606427 + L2 LINE L2 1815 2314 -1000 1260 279 104 14 chr20 25547601 25548110 -46605772 - HAL1 LINE L1 -1943 564 10 1505 192 70 5 chr20 25548240 25548625 -46605257 - L1MC3 LINE L1 -1 7784 7375 303 303 17 11 chr20 25548636 25548811 -46605071 - L1M4 LINE L1 -2324 3822 3647 22 0 0 0 chr20 25548944 25548966 -46604916 + AT_rich Low_complexity Low_complexity 1 22 0 267 224 104 22 chr20 25548999 25549182 -46604700 - L1M4 LINE L1 -2885 3261 3064 23 0 0 0 chr20 25550498 25550521 -46603361 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr20 25551347 25551376 -46602506 + AT_rich Low_complexity Low_complexity 1 29 0 220 361 41 16 chr20 25551435 25551557 -46602325 - L2 LINE L2 -14 3258 3134 417 305 15 15 chr20 25551816 25552085 -46601797 - L1ME1 LINE L1 -1097 5049 4781 1677 220 53 13 chr20 25552360 25552882 -46601000 + MER74A LTR ERVL 1 622 0 229 302 63 10 chr20 25553594 25553733 -46600149 + MIR3 SINE MIR 5 152 -67 188 143 143 20 chr20 25554260 25554309 -46599573 - MIR SINE MIR -71 137 83 399 21 0 0 chr20 25554309 25554357 -46599525 + (TG)n Simple_repeat Simple_repeat 2 49 0 522 304 31 16 chr20 25554380 25554574 -46599308 - MIR SINE MIR -37 225 29 1366 199 0 15 chr20 25556694 25556961 -46596921 + AluJb SINE Alu 50 312 0 467 275 84 68 chr20 25558510 25559070 -46594812 + L1ME3 LINE L1 1013 1581 -4949 324 283 56 61 chr20 25559132 25559312 -46594570 + L1ME3 LINE L1 1547 1725 -4815 1033 289 76 14 chr20 25559559 25560509 -46593373 + L1ME3 LINE L1 5275 6280 -276 21 0 0 0 chr20 25560978 25560999 -46592883 + AT_rich Low_complexity Low_complexity 1 21 0 236 287 46 23 chr20 25561901 25562117 -46591765 + L1MEd LINE L1 3648 3868 -2672 1202 147 56 8 chr20 25562135 25562386 -46591496 - L1MA8 LINE L1 -3 6288 6026 232 292 34 0 chr20 25563004 25563093 -46590789 + L2 LINE L2 2827 2918 -354 240 35 0 0 chr20 25563832 25563861 -46590021 + (CA)n Simple_repeat Simple_repeat 1 29 0 181 299 88 100 chr20 25564244 25564585 -46589297 + L2 LINE L2 2594 2930 -384 1281 202 62 0 chr20 25565093 25565350 -46588532 - AluJb SINE Alu -39 273 1 2186 109 31 0 chr20 25566872 25567166 -46586716 - AluY SINE Alu -8 303 1 1907 130 18 25 chr20 25567819 25568138 -46585744 + AluSg SINE Alu 1 317 0 929 186 129 0 chr20 25568924 25569117 -46584765 - MER20 DNA MER1_type -1 218 1 2008 120 0 0 chr20 25569742 25570016 -46583866 + AluSg SINE Alu 37 310 0 2070 139 0 0 chr20 25571858 25572146 -46581736 + AluSx SINE Alu 21 308 -4 1977 148 0 3 chr20 25572160 25572465 -46581417 + AluSx SINE Alu 1 304 -8 2433 97 0 0 chr20 25572967 25573276 -46580606 + AluSg SINE Alu 1 309 -1 290 25 0 25 chr20 25574961 25575001 -46578881 + (TG)n Simple_repeat Simple_repeat 1 39 0 641 233 116 53 chr20 25575700 25576001 -46577881 + MLT1H LTR MaLR 229 548 -1 469 234 5 151 chr20 25576642 25576720 -46577162 + MIR SINE MIR 48 89 -173 1473 117 26 30 chr20 25576720 25576951 -46576931 - MER30 DNA MER1_type 0 230 1 469 234 5 151 chr20 25576951 25577054 -46576828 + MIR SINE MIR 89 205 -57 251 298 111 47 chr20 25577860 25578376 -46575506 + L2 LINE L2 1277 1825 -1489 309 329 93 0 chr20 25578616 25578777 -46575105 + L2 LINE L2 2880 3055 -217 32 26 0 0 chr20 25579609 25579648 -46574234 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr20 25579731 25579767 -46574115 + AT_rich Low_complexity Low_complexity 1 36 0 324 260 73 8 chr20 25580170 25580293 -46573589 + MIR3 SINE MIR 73 203 -5 426 330 17 22 chr20 25580950 25581129 -46572753 - MIR SINE MIR -74 188 11 1757 178 3 16 chr20 25581142 25581446 -46572436 - AluJo SINE Alu -12 300 1 235 244 58 47 chr20 25583076 25583162 -46570720 + L2 LINE L2 2174 2260 -1054 30 0 0 0 chr20 25583355 25583385 -46570497 + AT_rich Low_complexity Low_complexity 1 30 0 184 365 58 19 chr20 25584323 25584427 -46569455 - L3b LINE CR1 -205 1378 1271 582 270 179 50 chr20 25585552 25586215 -46567667 + L2 LINE L2 2548 3312 -1 233 238 32 16 chr20 25586215 25586278 -46567604 + GA-rich Low_complexity Low_complexity 4 67 0 2264 94 17 7 chr20 25587310 25587609 -46566273 - AluSx SINE Alu -10 302 1 21 36 0 0 chr20 25587987 25588015 -46565867 + AT_rich Low_complexity Low_complexity 1 28 0 1045 180 50 0 chr20 25590105 25590305 -46563577 - MER6B DNA MER2_type 0 210 1 194 239 106 80 chr20 25590820 25590933 -46562949 - MIR3 SINE MIR -25 183 85 29 0 0 0 chr20 25591623 25591652 -46562230 + AT_rich Low_complexity Low_complexity 1 29 0 209 307 0 80 chr20 25591731 25591819 -46562063 + L2 LINE L2 3192 3272 0 2401 100 0 0 chr20 25593008 25593318 -46560564 + AluSg SINE Alu 1 310 0 489 252 8 0 chr20 25593491 25593610 -46560272 - MER63 DNA MER1_type -273 789 44 273 304 0 0 chr20 25593610 25593689 -46560193 + T-rich Low_complexity Low_complexity 1 79 0 225 253 111 61 chr20 25593983 25594082 -46559800 - MIR SINE MIR -121 141 38 581 297 102 24 chr20 25594245 25594864 -46559018 + L1MEc LINE L1 1075 1741 -4655 598 269 67 41 chr20 25595255 25595719 -46558163 + L1MEc LINE L1 2182 2657 -3558 501 219 57 57 chr20 25595743 25595953 -46557929 - L1MEd LINE L1 -5006 1113 904 1100 265 95 27 chr20 25596114 25596193 -46557689 + HAL1b LINE L1 467 539 -809 2289 117 0 3 chr20 25596193 25596501 -46557381 + AluSx SINE Alu 2 308 -4 1100 265 95 27 chr20 25596501 25597009 -46556873 + HAL1b LINE L1 539 1094 -254 305 333 5 53 chr20 25597191 25597380 -46556502 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 610 254 26 71 chr20 25597651 25597919 -46555963 + MER112 DNA MER1_type 1 256 -4 815 226 16 5 chr20 25598905 25599095 -46554787 + MER58A DNA MER1_type 33 224 0 1046 188 14 40 chr20 25600680 25600903 -46552979 - MER20 DNA MER1_type -2 217 1 342 0 0 0 chr20 25601468 25601506 -46552376 + (CA)n Simple_repeat Simple_repeat 2 39 0 801 286 83 20 chr20 25603093 25603443 -46550439 + MLT1H1 LTR MaLR 3 374 -181 2159 184 105 4 chr20 25603448 25603905 -46549977 + MLT1D LTR MaLR 3 505 0 2367 53 0 20 chr20 25604175 25604477 -46549405 - AluY SINE Alu -15 296 1 342 290 125 40 chr20 25604819 25605019 -46548863 - L1MC/D LINE L1 -2337 5471 5255 2300 115 0 3 chr20 25605159 25605582 -46548300 - AluSx SINE Alu 0 422 1 2009 91 34 0 chr20 25605660 25605925 -46547957 - AluY SINE Alu -37 274 1 375 23 0 0 chr20 25608687 25608731 -46545151 + (TG)n Simple_repeat Simple_repeat 2 45 0 240 323 0 0 chr20 25610710 25610772 -46543110 - MIR SINE MIR -108 100 39 913 291 29 0 chr20 25613182 25613426 -46540456 + MIR SINE MIR 2 252 -10 22 0 0 0 chr20 25614014 25614036 -46539846 + AT_rich Low_complexity Low_complexity 1 22 0 651 60 0 0 chr20 25614251 25614335 -46539547 + (GGGGA)n Simple_repeat Simple_repeat 4 87 0 2228 97 0 45 chr20 25614348 25614658 -46539224 - AluSx SINE Alu -16 296 1 241 261 152 48 chr20 25615288 25615453 -46538429 - MIR3 SINE MIR -5 203 22 2414 94 3 0 chr20 25617254 25617561 -46536321 - AluSx SINE Alu -4 308 1 275 54 0 0 chr20 25617722 25617759 -46536123 + MLT1E2 LTR MaLR 590 626 0 939 251 39 4 chr20 25617816 25618047 -46535835 + MIR SINE MIR 2 240 -22 29 0 0 0 chr20 25618091 25618120 -46535762 + AT_rich Low_complexity Low_complexity 1 29 0 1662 123 112 8 chr20 25618203 25618471 -46535411 - AluSc SINE Alu -13 296 1 486 179 135 43 chr20 25618804 25619011 -46534871 - MER96B DNA MER1_type? 0 417 192 21 71 0 0 chr20 25619123 25619165 -46534717 + AT_rich Low_complexity Low_complexity 1 42 0 284 306 67 0 chr20 25619476 25619610 -46534272 + L1MCc LINE L1 993 1135 -5288 1070 183 68 0 chr20 25619614 25619866 -46534016 + L1ME1 LINE L1 4978 5246 -900 2731 208 89 33 chr20 25619876 25620663 -46533219 + L1ME1 LINE L1 5318 6148 -18 25 31 0 0 chr20 25620677 25620709 -46533173 + AT_rich Low_complexity Low_complexity 1 32 0 278 228 55 170 chr20 25623024 25623406 -46530476 + MER46C DNA MER2_type 1 338 0 26 30 0 0 chr20 25624073 25624106 -46529776 + AT_rich Low_complexity Low_complexity 1 33 0 287 292 150 8 chr20 25624404 25624524 -46529358 + L2 LINE L2 2934 3070 -202 2489 76 3 16 chr20 25625057 25625373 -46528509 + AluSx SINE Alu 1 312 0 498 230 10 0 chr20 25625385 25625485 -46528397 - MER5A DNA MER1_type -86 103 3 22 0 0 0 chr20 25626031 25626053 -46527829 + AT_rich Low_complexity Low_complexity 1 22 0 3644 128 9 24 chr20 25626289 25626342 -46527540 - L1MA7 LINE L1 -334 5957 5905 2165 119 0 3 chr20 25626342 25626637 -46527245 - AluSx SINE Alu -18 294 1 3644 128 9 24 chr20 25626637 25627218 -46526664 - L1MA7 LINE L1 -386 5905 5332 28 0 0 0 chr20 25627369 25627397 -46526485 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr20 25627463 25627493 -46526389 + AT_rich Low_complexity Low_complexity 1 30 0 295 322 124 33 chr20 25627531 25627773 -46526109 - L2 LINE L2 -190 3082 2819 23 0 0 0 chr20 25631807 25631830 -46522052 + AT_rich Low_complexity Low_complexity 1 23 0 1853 131 71 14 chr20 25632109 25632392 -46521490 + AluSx SINE Alu 1 299 -13 26 0 0 0 chr20 25633192 25633218 -46520664 + AT_rich Low_complexity Low_complexity 1 26 0 2155 134 0 3 chr20 25633301 25633607 -46520275 - AluSx SINE Alu -7 305 1 390 309 207 17 chr20 25634798 25635228 -46518654 - L2 LINE L2 -1 3271 2752 571 163 0 0 chr20 25635448 25635540 -46518342 - Tigger7 DNA MER2_type 0 2491 2400 * 3032 139 13 50 chr20 25635539 25635752 -46518130 - Tigger7 DNA MER2_type -212 521 302 2088 132 0 0 chr20 25635752 25636039 -46517843 - AluSx SINE Alu -25 287 1 3032 139 13 50 chr20 25636039 25636366 -46517516 - Tigger7 DNA MER2_type -431 302 1 22 0 0 0 chr20 25637229 25637251 -46516631 + AT_rich Low_complexity Low_complexity 1 22 0 181 160 20 20 chr20 25639041 25639091 -46514791 + GA-rich Low_complexity Low_complexity 2 51 0 232 35 0 0 chr20 25640296 25640325 -46513557 + Charlie5 DNA MER1_type 6 34 -2578 1710 120 0 0 chr20 25640325 25640577 -46513305 + AluSx SINE Alu 58 309 0 1583 197 76 63 chr20 25641455 25641982 -46511900 + MER74A LTR ERVL 1 534 -24 424 254 42 34 chr20 25642257 25642375 -46511507 + L2 LINE L2 3195 3313 0 476 318 65 30 chr20 25642455 25642656 -46511226 + MIR SINE MIR 8 215 -47 2280 105 0 7 chr20 25642813 25643118 -46510764 + AluSx SINE Alu 1 303 -9 518 275 71 62 chr20 25644417 25644980 -46508902 + L1MC/D LINE L1 690 1257 -4862 2336 97 0 7 chr20 25645049 25645359 -46508523 + AluY SINE Alu 1 308 -3 24 32 0 0 chr20 25645359 25645390 -46508492 + AT_rich Low_complexity Low_complexity 1 31 0 228 163 0 0 chr20 25645494 25645537 -46508345 + (CTA)n Simple_repeat Simple_repeat 1 43 0 579 273 46 85 chr20 25645683 25646049 -46507833 + L1MC/D LINE L1 3383 3734 -2395 1649 159 28 28 chr20 25646053 25646375 -46507507 + AluJo SINE Alu 1 322 0 340 233 95 50 chr20 25646380 25646663 -46507219 + L1MC/D LINE L1 3817 4112 -2017 356 338 14 0 chr20 25646798 25646940 -46506942 + L1ME3A LINE L1 5807 5950 -220 21 36 0 0 chr20 25647921 25647949 -46505933 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 25648026 25648049 -46505833 + AT_rich Low_complexity Low_complexity 1 23 0 255 286 43 50 chr20 25648078 25648239 -46505643 + L1MC/D LINE L1 5544 5703 -2088 183 254 0 36 chr20 25648604 25648659 -46505223 + MIR SINE MIR 36 88 -174 181 261 109 0 chr20 25648922 25648968 -46504914 - MIR SINE MIR -29 233 183 799 188 71 0 chr20 25648970 25649140 -46504742 - MER58A DNA MER1_type -1 223 42 189 0 0 0 chr20 25649195 25649216 -46504666 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 1038 254 99 66 chr20 25649217 25649779 -46504103 - L2 LINE L2 -12 3301 2648 2600 57 0 10 chr20 25649779 25650093 -46503789 - AluY SINE Alu 0 311 1 1038 254 99 66 chr20 25650093 25650337 -46503545 - L2 LINE L2 -665 2648 2414 328 339 135 14 chr20 25651250 25651598 -46502284 + L2 LINE L2 2258 2647 -667 220 222 133 0 chr20 25652210 25652300 -46501582 - MIR SINE MIR -126 136 35 813 181 13 27 chr20 25653856 25654005 -46499877 + FRAM SINE Alu 1 146 -30 203 59 0 29 chr20 25654008 25654042 -46499840 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 192 194 0 0 chr20 25654812 25654848 -46499034 - L2 LINE L2 -86 3186 3151 837 315 92 21 chr20 25655019 25655744 -46498138 + L2 LINE L2 2208 2997 -316 1938 174 103 72 chr20 25655748 25656260 -46497622 + LTR64 LTR ERVK 1 528 -30 535 293 20 0 chr20 25656878 25657028 -46496854 + L2 LINE L2 3159 3311 -2 198 254 118 55 chr20 25657585 25657695 -46496187 - MIR SINE MIR -66 196 80 474 216 119 67 chr20 25658293 25658411 -46495471 + MIR SINE MIR 16 149 -113 2117 108 49 0 chr20 25658411 25658697 -46495185 + AluSx SINE Alu 1 300 -12 474 216 119 67 chr20 25658697 25658772 -46495110 + MIR SINE MIR 149 219 -43 841 97 0 0 chr20 25660360 25660473 -46493409 + AluSp/q SINE Alu 190 302 -11 2374 88 0 0 chr20 25661512 25661809 -46492073 + AluSc SINE Alu 4 300 -9 1466 309 94 28 chr20 25662572 25663543 -46490339 + L2 LINE L2 92 1126 -2188 230 204 216 0 chr20 25663718 25663806 -46490076 + L2 LINE L2 1837 1943 -1371 2104 164 105 0 chr20 25663947 25664337 -46489545 + MSTB1 LTR MaLR 1 431 -1 26 64 0 0 chr20 25664422 25664469 -46489413 + AT_rich Low_complexity Low_complexity 1 47 0 556 272 151 47 chr20 25664665 25665093 -46488789 + MLT1L LTR MaLR 104 492 -19 2084 130 3 13 chr20 25665970 25666277 -46487605 + AluJb SINE Alu 1 304 -8 530 290 95 37 chr20 25668571 25669048 -46484834 + L2 LINE L2 2665 3170 -143 845 148 0 15 chr20 25669048 25669183 -46484699 - FLAM_C SINE Alu 0 133 1 530 290 95 37 chr20 25669183 25669246 -46484636 + L2 LINE L2 3170 3228 -85 658 116 0 74 chr20 25669390 25669511 -46484371 + AluJb SINE Alu 196 307 -5 372 253 22 51 chr20 25669726 25669973 -46483909 + MLT1K LTR MaLR 134 422 -166 361 178 196 28 chr20 25670052 25670159 -46483723 + MLT1K LTR MaLR 456 580 -8 751 204 38 0 chr20 25670263 25670420 -46483462 + L1MB5 LINE L1 5971 6133 -41 763 81 0 0 chr20 25670421 25670520 -46483362 - AluSg/x SINE Alu -15 297 199 2099 110 16 44 chr20 25670528 25670847 -46483035 - AluSx SINE Alu -2 310 1 261 104 0 0 chr20 25670847 25670895 -46482987 + L1MB5 LINE L1 6127 6174 0 348 306 16 16 chr20 25670933 25671057 -46482825 - L1ME LINE L1 -468 5653 5530 5763 99 18 11 chr20 25671765 25672621 -46481261 + L1PA16 LINE L1 5303 6164 -2 207 343 0 0 chr20 25673192 25673262 -46480620 + L2 LINE L2 3243 3312 -1 802 231 93 5 chr20 25673263 25673479 -46480403 + MIR SINE MIR 28 262 0 2041 107 31 7 chr20 25673603 25673894 -46479988 + AluSg SINE Alu 1 298 -12 2402 101 0 0 chr20 25673906 25674214 -46479668 + AluSg SINE Alu 1 308 -2 1825 239 43 5 chr20 25674418 25674861 -46479021 - LTR16B LTR ERVL -4 460 1 1890 158 0 0 chr20 25675039 25675330 -46478552 + AluSx SINE Alu 3 293 -19 24 32 0 0 chr20 25675683 25675714 -46478168 + AT_rich Low_complexity Low_complexity 1 31 0 183 127 16 159 chr20 25676906 25676969 -46476913 + L2 LINE L2 2725 2778 -536 186 306 25 50 chr20 25677004 25677164 -46476718 + L2 LINE L2 2933 3088 -184 1596 192 20 7 chr20 25677357 25677649 -46476233 - AluJb SINE Alu -16 296 1 21 0 0 0 chr20 25677740 25677761 -46476121 + AT_rich Low_complexity Low_complexity 1 21 0 280 0 0 48 chr20 25677794 25677836 -46476046 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2128 98 0 0 chr20 25677839 25678113 -46475769 - AluSg SINE Alu -36 274 1 210 283 195 0 chr20 25678963 25679076 -46474806 + MIR SINE MIR 57 191 -71 225 200 240 0 chr20 25679438 25679538 -46474344 + L1ME2 LINE L1 5604 5727 -394 206 143 0 48 chr20 25679539 25679581 -46474301 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 1499 187 19 7 chr20 25680112 25680435 -46473447 + MER33 DNA MER1_type 1 319 -5 2425 114 37 0 chr20 25680478 25680829 -46473053 + THE1B LTR MaLR 1 364 0 1511 185 10 34 chr20 25681046 25681183 -46472699 + AluJb SINE Alu 1 140 -172 2236 119 0 0 chr20 25681183 25681485 -46472397 + AluSx SINE Alu 1 302 -10 1511 185 10 34 chr20 25681485 25681644 -46472238 + AluJb SINE Alu 140 290 -22 204 245 0 0 chr20 25681803 25681852 -46472030 + MIR SINE MIR 106 154 -108 372 268 33 33 chr20 25682130 25682283 -46471599 - MIR SINE MIR -65 197 45 23 0 0 0 chr20 25683936 25683959 -46469923 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr20 25684483 25684517 -46469365 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr20 25684640 25684662 -46469220 + GC_rich Low_complexity Low_complexity 1 22 0 279 122 0 0 chr20 25684728 25684777 -46469105 + (CCG)n Simple_repeat Simple_repeat 2 50 0 347 285 73 8 chr20 25685885 25686008 -46467874 + L2 LINE L2 3137 3267 -5 453 150 0 0 chr20 25686139 25686219 -46467663 + L1ME2 LINE L1 5783 5862 -302 351 314 41 0 chr20 25686535 25686656 -46467226 - L2 LINE L2 -10 3262 3137 424 183 124 183 chr20 25687085 25687307 -46466575 + L1MC4a LINE L1 5415 5648 -2160 1603 122 83 8 chr20 25687307 25687561 -46466321 - AluSx SINE Alu 0 312 40 2168 126 13 0 chr20 25687563 25687864 -46466018 - AluSx SINE Alu -7 305 1 424 183 124 183 chr20 25687864 25687911 -46465971 + L1MC4a LINE L1 5649 5671 -2137 429 202 89 65 chr20 25687957 25688125 -46465757 + L1MC4a LINE L1 6066 6237 -1571 1191 256 94 32 chr20 25688213 25688651 -46465231 + MLT1C LTR MaLR 1 465 -2 324 225 73 80 chr20 25688708 25688859 -46465023 + L1MC4a LINE L1 5748 5897 -1911 791 217 165 32 chr20 25688869 25689214 -46464668 + L1MC4a LINE L1 5967 6357 -1451 1957 120 62 7 chr20 25689367 25689659 -46464223 + AluSc SINE Alu 1 308 -1 987 205 86 52 chr20 25689713 25689728 -46464154 - L1M4 LINE L1 -1196 4950 4937 2174 121 13 0 chr20 25689728 25690035 -46463847 + AluSx SINE Alu 2 312 0 987 205 86 52 chr20 25690035 25690075 -46463807 - L1M4 LINE L1 -1209 4937 4900 2454 61 7 0 chr20 25690075 25690370 -46463512 - AluY SINE Alu -14 297 1 987 205 86 52 chr20 25690370 25690640 -46463242 - L1M4 LINE L1 -1246 4900 4613 279 194 236 0 chr20 25690681 25690753 -46463129 + L1MC4a LINE L1 6645 6733 -1075 26 30 0 0 chr20 25690756 25690789 -46463093 + AT_rich Low_complexity Low_complexity 1 33 0 742 168 0 0 chr20 25690789 25690902 -46462980 - FLAM_C SINE Alu -24 119 7 457 213 259 11 chr20 25690912 25691086 -46462796 + L1MC4 LINE L1 6812 7028 -1014 703 200 23 0 chr20 25691099 25691229 -46462653 + AluJo SINE Alu 3 135 -177 2337 82 0 30 chr20 25691288 25691592 -46462290 - AluY SINE Alu -16 295 1 1229 139 191 45 chr20 25691749 25692038 -46461844 + AluJo SINE Alu 1 312 0 1727 185 3 3 chr20 25692984 25693282 -46460600 + AluJo SINE Alu 5 302 -10 1767 150 39 3 chr20 25693504 25693790 -46460092 + AluJo SINE Alu 1 296 -16 1917 151 0 16 chr20 25694052 25694357 -46459525 + AluJb SINE Alu 1 300 -12 29 0 0 25 chr20 25694750 25694769 -46459113 + AT_rich Low_complexity Low_complexity 1 19 -20 2022 109 0 0 chr20 25694769 25695025 -46458857 + AluSx SINE Alu 33 288 -24 29 0 0 25 chr20 25695025 25695045 -46458837 + AT_rich Low_complexity Low_complexity 19 39 0 24 32 0 0 chr20 25695119 25695150 -46458732 + AT_rich Low_complexity Low_complexity 1 31 0 796 247 0 0 chr20 25695420 25695582 -46458300 - FRAM SINE Alu -7 169 8 2264 111 3 0 chr20 25695772 25696078 -46457804 + AluSp SINE Alu 1 307 -6 380 216 108 9 chr20 25697045 25697156 -46456726 - LTR67 LTR ERVL 0 557 436 325 277 27 85 chr20 25698180 25698368 -46455514 - L2 LINE L2 -82 3190 3014 275 265 47 103 chr20 25698628 25698859 -46455023 + MIR SINE MIR 22 249 -13 959 180 0 12 chr20 25699173 25699340 -46454542 + FRAM SINE Alu 1 165 -11 3614 109 9 0 chr20 25699863 25700397 -46453485 + L1MA5A LINE L1 5757 6295 -2 339 219 0 0 chr20 25700400 25700464 -46453418 + L2 LINE L2 2771 2834 -480 1059 179 14 29 chr20 25700502 25700709 -46453173 - AluJo SINE Alu -13 299 96 205 156 44 0 chr20 25701185 25701230 -46452652 + T-rich Low_complexity Low_complexity 4 50 0 1163 259 75 53 chr20 25701263 25701787 -46452095 - MLT1G1 LTR MaLR 0 595 20 1286 119 5 16 chr20 25702146 25702331 -46451551 + AluSg/x SINE Alu 112 294 -18 599 202 0 0 chr20 25702342 25702451 -46451431 + AluJo/FLAM SINE Alu 2 110 -202 371 206 0 0 chr20 25702453 25702516 -46451366 + AluJ/FRAM SINE Alu 226 288 -14 911 196 6 12 chr20 25702795 25702958 -46450924 + FRAM SINE Alu 1 159 -17 2267 115 3 0 chr20 25703041 25703336 -46450546 - AluSx SINE Alu -16 296 1 344 210 10 70 chr20 25705018 25705118 -46448764 - MER96 DNA MER1_type? 0 175 82 1960 159 3 0 chr20 25705323 25705618 -46448264 + AluJo SINE Alu 1 296 -16 354 212 7 95 chr20 25705742 25705768 -46448114 - MLT1K LTR MaLR -2 586 559 1962 134 3 23 chr20 25705768 25706073 -46447809 + AluSx SINE Alu 10 308 -4 354 212 7 95 chr20 25706073 25706183 -46447699 - MLT1K LTR MaLR -29 559 462 1092 137 47 26 chr20 25707416 25707649 -46446233 + L1MA7 LINE L1 6053 6290 -1 21 0 0 0 chr20 25707649 25707670 -46446212 + AT_rich Low_complexity Low_complexity 1 21 0 306 242 145 98 chr20 25707815 25708386 -46445496 + L1ME4a LINE L1 5524 6121 0 1153 264 67 23 chr20 25709096 25709482 -46444400 - LTR16C LTR ERVL 0 491 89 1884 154 3 19 chr20 25709986 25710297 -46443585 - AluJo SINE Alu -6 306 1 541 240 183 19 chr20 25710300 25710418 -46443464 - L1MD3 LINE L1 -804 7191 7094 189 74 0 0 chr20 25710418 25710445 -46443437 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 541 240 183 19 chr20 25710445 25710534 -46443348 - L1MD3 LINE L1 -901 7094 6950 2150 159 0 0 chr20 25710558 25710878 -46443004 - 7SLRNA srpRNA srpRNA 0 320 1 2327 83 105 0 chr20 25710911 25711034 -46442848 + MER41-int LTR ERV1 2637 2746 -3200 207 0 0 0 chr20 25711034 25711057 -46442825 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 2327 83 105 0 chr20 25711057 25711284 -46442598 + MER41-int LTR ERV1 2746 3024 -2922 6363 69 41 5 chr20 25711293 25712435 -46441447 + L1PB1 LINE L1 4970 6142 -9 318 266 86 8 chr20 25713113 25713241 -46440641 + MIR SINE MIR 10 147 -115 578 240 179 68 chr20 25713271 25713680 -46440202 + LTR33 LTR ERVL 1 454 -67 2321 102 3 0 chr20 25714581 25714884 -46438998 + AluSx SINE Alu 3 306 -6 22 0 0 0 chr20 25715192 25715214 -46438668 + AT_rich Low_complexity Low_complexity 1 22 0 191 282 48 58 chr20 25715519 25715622 -46438260 + MIR SINE MIR 53 154 -108 2585 151 21 5 chr20 25716898 25717323 -46436559 + MSTB1 LTR MaLR 1 432 0 863 197 33 61 chr20 25717712 25717925 -46435957 - LTR16C LTR ERVL -27 464 258 219 259 62 25 chr20 25717936 25718017 -46435865 + MIR SINE MIR 160 243 -19 711 169 40 0 chr20 25718496 25718620 -46435262 + FRAM SINE Alu 9 137 -39 1212 256 99 27 chr20 25720796 25720946 -46432936 + MLT1G1 LTR MaLR 76 214 -381 3486 115 8 2 chr20 25720946 25721440 -46432442 + LOR1a LTR ERV1 1 497 0 1212 256 99 27 chr20 25721440 25721774 -46432108 + MLT1G1 LTR MaLR 214 595 0 40 31 0 15 chr20 25722312 25722359 -46431523 + AT_rich Low_complexity Low_complexity 1 48 -16 2131 127 3 0 chr20 25722359 25722651 -46431231 + AluSx SINE Alu 1 293 -19 40 31 0 15 chr20 25722651 25722668 -46431214 + AT_rich Low_complexity Low_complexity 48 64 0 686 156 37 0 chr20 25722668 25722777 -46431105 - AluJb SINE Alu -189 123 11 219 288 19 100 chr20 25723712 25723872 -46430010 + MIR SINE MIR 70 216 -46 215 220 0 20 chr20 25724133 25724183 -46429699 + GA-rich Low_complexity Low_complexity 1 49 0 390 210 74 68 chr20 25724330 25724507 -46429375 - MIR SINE MIR -62 146 16 217 245 179 9 chr20 25725525 25725631 -46428251 + MIR SINE MIR 35 158 -104 * 1949 289 171 15 chr20 25725626 25726588 -46427294 + L2 LINE L2 906 2017 -1297 1181 215 130 106 chr20 25726588 25727156 -46426726 - MLT1G1 LTR MaLR 0 595 14 2196 100 0 7 chr20 25727163 25727452 -46426430 + AluSq SINE Alu 17 303 -10 1246 268 95 10 chr20 25727484 25727980 -46425902 + L2 LINE L2 2065 2602 -712 2121 129 0 7 chr20 25728294 25728596 -46425286 - AluSg SINE Alu -10 300 1 604 264 50 81 chr20 25729868 25729909 -46423973 - LTR16A1 LTR ERVL 0 457 416 1403 162 6 105 chr20 25729909 25730242 -46423640 - AluY SINE Alu -11 300 1 604 264 50 81 chr20 25730242 25730496 -46423386 - LTR16A1 LTR ERVL -41 416 182 2318 98 7 0 chr20 25730695 25730992 -46422890 + AluSg SINE Alu 1 299 -11 1940 168 0 0 chr20 25731162 25731471 -46422411 - AluSx SINE Alu -3 309 1 1965 175 0 0 chr20 25732201 25732510 -46421372 + AluSx SINE Alu 1 309 -3 657 248 115 13 chr20 25732763 25733026 -46420856 - L1ME2 LINE L1 -70 6094 5796 264 284 30 0 chr20 25733919 25733986 -46419896 - L1ME2 LINE L1 -516 5654 5586 231 299 42 0 chr20 25734473 25734592 -46419290 - MIR SINE MIR -23 185 63 834 268 154 22 chr20 25734695 25735110 -46418772 + LTR33 LTR ERVL 44 513 -8 1661 224 128 17 chr20 25735267 25735909 -46417973 + L1ME3A LINE L1 5368 6111 -59 1416 167 7 43 chr20 25735913 25736189 -46417693 - AluJo SINE Alu -9 303 38 296 209 11 44 chr20 25738523 25738614 -46415268 - L1ME LINE L1 -303 5818 5731 4252 91 1 59 chr20 25739198 25739654 -46414228 - MER4B LTR ERV1 0 610 200 2186 109 0 3 chr20 25739654 25739938 -46413944 - AluSx SINE Alu -28 284 2 4252 91 1 59 chr20 25739938 25740128 -46413754 - MER4B LTR ERV1 -410 200 1 320 294 99 14 chr20 25740189 25740410 -46413472 + L2 LINE L2 2895 3134 -179 7365 137 70 116 chr20 25740412 25742191 -46411691 + pTR5 LTR ERV1 743 2438 0 285 335 28 33 chr20 25742192 25742374 -46411508 + L2 LINE L2 3130 3310 -3 261 83 0 0 chr20 25742487 25742523 -46411359 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 1598 185 34 0 chr20 25742533 25742798 -46411084 - AluJb SINE Alu -38 274 1 404 300 31 0 chr20 25743429 25743559 -46410323 + LTR16C LTR ERVL 152 285 -206 2386 86 0 3 chr20 25743771 25744073 -46409809 - AluY SINE Alu -10 301 1 2127 191 57 7 chr20 25744194 25744633 -46409249 - LOR1b LTR ERV1 0 461 1 239 29 147 0 chr20 25745319 25745353 -46408529 - U2 snRNA snRNA -136 52 14 650 279 98 17 chr20 25745493 25745780 -46408102 + LTR16C LTR ERVL 181 490 -1 1893 109 60 8 chr20 25745862 25746157 -46407725 - AluSc SINE Alu 0 309 1 531 221 12 2 chr20 25746713 25746847 -46407035 + MLT1H LTR MaLR 1 174 -375 1020 204 55 68 chr20 25746861 25747170 -46406712 - MLT1C LTR MaLR -129 338 34 1570 118 4 9 chr20 25747269 25747497 -46406385 + AluJb SINE Alu 85 311 -1 2914 214 55 45 chr20 25747578 25747607 -46406275 - L1M4 LINE L1 -1364 4782 4755 2022 123 0 60 chr20 25747607 25747925 -46405957 - AluSq SINE Alu -14 299 1 2914 214 55 45 chr20 25747925 25748690 -46405192 - L1M4 LINE L1 -1391 4755 3980 2124 131 0 0 chr20 25748699 25748997 -46404885 - AluSq SINE Alu -15 298 1 1505 154 9 109 chr20 25750363 25750693 -46403189 + AluJo SINE Alu 2 298 -4 407 297 166 4 chr20 25750795 25751024 -46402858 + L1ME3A LINE L1 5459 5724 -446 1491 170 207 11 chr20 25751030 25751383 -46402499 + MER39 LTR ERV1 4 425 -282 24 96 0 0 chr20 25751383 25751456 -46402426 + AT_rich Low_complexity Low_complexity 1 73 0 2050 115 7 3 chr20 25751468 25751754 -46402128 + AluSx SINE Alu 24 310 -2 1181 165 35 89 chr20 25751785 25752101 -46401781 + MER39 LTR ERV1 409 707 0 410 214 0 51 chr20 25752101 25752199 -46401683 + L1ME3A LINE L1 5723 5815 -355 237 237 17 0 chr20 25752199 25752258 -46401624 + L1ME3A LINE L1 6106 6165 -5 277 231 26 51 chr20 25752990 25753107 -46400775 - L1MA10 LINE L1 -7 6327 6214 1475 178 3 68 chr20 25753575 25753912 -46399970 - MLT1B LTR MaLR -70 320 6 577 291 118 63 chr20 25754861 25755332 -46398550 + Charlie8 DNA MER1_type 1 485 -1932 288 111 0 0 chr20 25756427 25756472 -46397410 + (TG)n Simple_repeat Simple_repeat 1 45 0 871 223 100 76 chr20 25756568 25756778 -46397104 - L1MC5 LINE L1 -41 7920 7717 1942 137 0 0 chr20 25756778 25757119 -46396763 - AluSx SINE Alu 0 341 1 871 223 100 76 chr20 25757119 25757365 -46396517 - L1MC5 LINE L1 -244 7717 7452 1042 273 129 27 chr20 25757694 25758182 -46395700 + MLT1H LTR MaLR 12 549 0 192 97 0 0 chr20 25758209 25758240 -46395642 + (CA)n Simple_repeat Simple_repeat 1 31 0 485 330 70 13 chr20 25758695 25758925 -46394957 - MIR SINE MIR 0 262 20 21 0 0 0 chr20 25758938 25758959 -46394923 + AT_rich Low_complexity Low_complexity 1 21 0 988 268 90 38 chr20 25759219 25759619 -46394263 + LTR16C LTR ERVL 67 487 -4 210 236 90 67 chr20 25759633 25759722 -46394160 + L2 LINE L2 2422 2512 -802 298 267 0 33 chr20 25759879 25759969 -46393913 - MIR SINE MIR 0 262 176 1951 213 56 11 chr20 25760152 25760613 -46393269 + L1MC3 LINE L1 6144 6625 -1160 1741 156 38 63 chr20 25760616 25760963 -46392919 - MER7A DNA MER2_type -1 345 10 5322 198 20 19 chr20 25760965 25762090 -46391792 + L1MC3 LINE L1 6642 7768 -17 2237 102 0 6 chr20 25762099 25762447 -46391435 + AluSx SINE Alu 1 312 0 2295 75 0 3 chr20 25763228 25763533 -46390349 + AluY SINE Alu 1 304 -7 1327 176 13 63 chr20 25763546 25763847 -46390035 + AluJo SINE Alu 1 286 -16 343 242 76 45 chr20 25764002 25764134 -46389748 + LTR16C LTR ERVL 72 207 -284 446 241 53 10 chr20 25764194 25764381 -46389501 + LTR16A1 LTR ERVL 298 457 0 249 276 11 23 chr20 25764563 25764651 -46389231 + LTR16B LTR ERVL 372 444 -6 186 43 0 0 chr20 25765011 25765034 -46388848 + (TC)n Simple_repeat Simple_repeat 2 24 0 1959 108 4 0 chr20 25765043 25765322 -46388560 - AluSx SINE Alu -32 280 1 1062 187 39 10 chr20 25765521 25765724 -46388158 - MER20 DNA MER1_type -4 215 7 629 233 190 5 chr20 25766165 25766349 -46387533 + MIR SINE MIR 31 255 -7 831 219 26 0 chr20 25766714 25766869 -46387013 + FRAM SINE Alu 1 157 -19 1995 120 17 0 chr20 25766889 25767188 -46386694 + AluSx SINE Alu 1 304 -8 421 202 17 135 chr20 25767200 25767378 -46386504 + MIR SINE MIR 106 262 0 586 277 18 6 chr20 25767438 25767604 -46386278 - MER20 DNA MER1_type -51 168 1 2082 118 0 0 chr20 25768081 25768370 -46385512 - AluSx SINE Alu -21 291 3 326 263 228 9 chr20 25768541 25768655 -46385227 - MER5A DNA MER1_type -31 158 20 321 26 0 0 chr20 25768786 25768824 -46385058 + (TG)n Simple_repeat Simple_repeat 2 39 0 221 235 118 13 chr20 25769786 25769877 -46384005 + MIR SINE MIR 38 136 -72 1977 216 78 33 chr20 25770089 25770787 -46383095 - L1ME2 LINE L1 -33 6131 5349 1684 137 13 48 chr20 25770787 25771100 -46382782 + AluJo SINE Alu 1 302 -10 1977 216 78 33 chr20 25771100 25771238 -46382644 - L1ME2 LINE L1 -815 5349 5219 494 224 99 13 chr20 25771814 25771966 -46381916 - MLT1H LTR MaLR 0 549 385 566 258 167 18 chr20 25772174 25772395 -46381487 - LTR16C LTR ERVL 0 491 238 1863 126 51 3 chr20 25772748 25773041 -46380841 - AluJo SINE Alu -5 307 1 1309 186 72 4 chr20 25773938 25774201 -46379681 + AluJo SINE Alu 1 281 -31 420 20 0 0 chr20 25774202 25774251 -46379631 + (TG)n Simple_repeat Simple_repeat 1 49 0 228 306 0 0 chr20 25774383 25774445 -46379437 - L1MC/D LINE L1 -1903 5905 5844 301 143 0 86 chr20 25774463 25774533 -46379349 - MLT2C1 LTR ERVL 0 397 334 1361 227 125 36 chr20 25774554 25774994 -46378888 - MLT2B1 LTR ERVL -41 479 1 834 262 109 0 chr20 25775018 25775266 -46378616 - L1MC/D LINE L1 -2012 5796 5522 606 255 95 61 chr20 25775276 25775602 -46378280 + MLT1K LTR MaLR 183 519 -69 2026 112 7 7 chr20 25775605 25775908 -46377974 - AluJb SINE Alu -9 303 1 871 107 38 0 chr20 25776337 25776468 -46377414 - AluJo SINE Alu -176 136 1 220 233 23 0 chr20 25776798 25776841 -46377041 + MER91 DNA MER1_type 130 173 -17 886 230 78 8 chr20 25776855 25777112 -46376770 - LTR16C LTR ERVL -2 489 215 237 257 86 0 chr20 25777383 25777453 -46376429 + L2 LINE L2 3155 3230 -42 853 207 58 13 chr20 25777461 25777701 -46376181 - LTR35 LTR ERV1 -1 676 432 320 114 38 89 chr20 25777719 25777798 -46376084 - LTR43 LTR ERV1 -345 257 183 1317 192 77 0 chr20 25779875 25780183 -46373699 - AluJo SINE Alu 0 328 1 2049 133 0 3 chr20 25780876 25781177 -46372705 + AluSx SINE Alu 1 300 -12 1580 170 20 24 chr20 25781508 25781802 -46372080 - AluJo SINE Alu -16 296 4 257 264 113 28 chr20 25782060 25782166 -46371716 + MLT1J LTR MaLR 26 140 -371 3019 109 7 2 chr20 25782181 25782613 -46371269 + MER57B LTR ERV1 1 434 0 3190 108 63 24 chr20 25782735 25783356 -46370526 - LTR8A LTR ERV1 0 727 1 2533 110 11 14 chr20 25783847 25784210 -46369672 - LTR8 LTR ERV1 0 691 330 2997 145 82 36 chr20 25784210 25784761 -46369121 + LTR9 LTR ERV1 37 612 0 2059 139 0 9 chr20 25784769 25785085 -46368797 - LTR8 LTR ERV1 -376 315 3 2235 48 48 3 chr20 25785463 25785754 -46368128 - AluY SINE Alu -7 304 1 218 257 189 27 chr20 25785992 25786066 -46367816 + MIR3 SINE MIR 96 181 -27 1890 154 138 54 chr20 25786306 25786786 -46367096 + MLT2B1 LTR ERVL 1 520 0 2200 133 99 35 chr20 25786855 25787379 -46366503 + LTR35 LTR ERV1 1 618 0 4528 147 62 25 chr20 25787620 25788490 -46365392 - MER4D LTR ERV1 0 862 1 238 184 0 0 chr20 25788673 25788711 -46365171 + MER34C LTR ERV1 4 41 -544 1203 214 115 45 chr20 25789019 25789481 -46364401 + LTR54B LTR ERV1 1 494 -4 1090 234 146 68 chr20 25789913 25790044 -46363838 + MER34C LTR ERV1 1 120 -465 2440 77 0 0 chr20 25790044 25790355 -46363527 + AluY SINE Alu 1 311 0 1090 234 146 68 chr20 25790355 25790766 -46363116 + MER34C LTR ERV1 120 585 0 830 171 167 16 chr20 25791006 25791143 -46362739 - MER63 DNA MER1_type -77 985 870 2246 113 0 0 chr20 25791143 25791453 -46362429 - AluSx SINE Alu -2 310 1 830 171 167 16 chr20 25791453 25791560 -46362322 - MER63 DNA MER1_type -192 870 704 2560 145 48 24 chr20 25791560 25791806 -46362076 + LTR24 LTR ERV1 1 265 -202 1660 152 7 7 chr20 25791806 25792102 -46361780 + AluJb SINE Alu 1 296 -16 2560 145 48 24 chr20 25792102 25792311 -46361571 + LTR24 LTR ERV1 265 467 0 388 231 60 0 chr20 25792778 25792895 -46360987 - LTR33 LTR ERVL -89 432 309 315 274 20 41 chr20 25793327 25793473 -46360409 + HAL1 LINE L1 999 1141 -1366 301 274 53 18 chr20 25793642 25793755 -46360127 - LTR16A LTR ERVL -229 221 105 454 331 61 51 chr20 25793968 25794457 -46359425 - ERVL LTR ERVL -377 5387 4894 955 156 9 108 chr20 25794465 25794599 -46359283 + MER3 DNA MER1_type 2 105 -104 1523 148 133 11 chr20 25794599 25794863 -46359019 + AluJb SINE Alu 1 296 -6 955 156 9 108 chr20 25794863 25794959 -46358923 + MER3 DNA MER1_type 105 209 0 661 344 80 18 chr20 25795012 25796197 -46357685 - ERVL LTR ERVL -923 4841 3522 798 279 75 18 chr20 25796281 25796589 -46357293 - LTR16A LTR ERVL -107 350 28 305 212 45 0 chr20 25796634 25796700 -46357182 + HAL1 LINE L1 1425 1493 -1014 1496 163 30 30 chr20 25797739 25797906 -46355976 - AluJb SINE Alu -12 300 131 2178 117 0 0 chr20 25797906 25798213 -46355669 - AluSx SINE Alu -5 307 1 1496 163 30 30 chr20 25798213 25798345 -46355537 - AluJb SINE Alu -180 132 1 426 303 130 23 chr20 25798624 25798924 -46354958 - L1ME2 LINE L1 0 6164 5833 1037 168 50 23 chr20 25798963 25799183 -46354699 - LTR16C LTR ERVL -4 487 262 434 188 10 0 chr20 25799953 25800049 -46353833 + GA-rich Low_complexity Low_complexity 2 98 0 276 159 37 19 chr20 25800103 25800210 -46353672 + GA-rich Low_complexity Low_complexity 2 110 0 532 275 82 77 chr20 25800212 25800565 -46353317 - LTR16B LTR ERVL -92 372 18 35 0 0 0 chr20 25800646 25800681 -46353201 + AT_rich Low_complexity Low_complexity 1 35 0 409 161 0 25 chr20 25800887 25800968 -46352914 + MIR SINE MIR 61 139 -123 1797 158 49 35 chr20 25800987 25801355 -46352527 + THE1C LTR MaLR 1 373 -2 9976 130 11 22 chr20 25801359 25802956 -46350926 + THE1C-int LTR MaLR 3 1580 0 1875 134 56 39 chr20 25802956 25803313 -46350569 + THE1C LTR MaLR 1 363 -12 1638 189 27 3 chr20 25803313 25803614 -46350268 - AluJb SINE Alu -4 308 1 1893 122 7 4 chr20 25804539 25804818 -46349064 + AluSx SINE Alu 1 280 -32 207 186 0 0 chr20 25804820 25804863 -46349019 + (CA)n Simple_repeat Simple_repeat 2 44 0 578 245 69 69 chr20 25805279 25805540 -46348342 + LTR16C LTR ERVL 231 491 0 511 335 113 36 chr20 25805866 25806415 -46347467 - L2 LINE L2 -546 2768 2178 * 773 213 27 43 chr20 25806404 25806592 -46347290 + MER5A DNA MER1_type 5 189 0 353 164 16 0 chr20 25806600 25806661 -46347221 + MER5B DNA MER1_type 1 62 -116 814 169 52 12 chr20 25806663 25806835 -46347047 + AluJb SINE Alu 130 308 -4 2106 115 3 6 chr20 25806838 25807151 -46346731 + AluSx SINE Alu 1 312 0 470 170 0 100 chr20 25807213 25807313 -46346569 - MER81 DNA DNA -1 113 24 297 200 29 14 chr20 25807317 25807387 -46346495 + MER5B DNA MER1_type 108 178 0 525 256 25 38 chr20 25807409 25807569 -46346313 - MER5B DNA MER1_type -16 162 5 200 280 0 0 chr20 25807917 25807967 -46345915 + CT-rich Low_complexity Low_complexity 4 53 0 2377 84 0 0 chr20 25808558 25808866 -46345016 - AluSc SINE Alu -1 308 1 202 204 19 37 chr20 25809011 25809065 -46344817 + CT-rich Low_complexity Low_complexity 3 55 0 2178 102 3 0 chr20 25810389 25810694 -46343188 + AluSx SINE Alu 1 306 -6 1677 158 132 42 chr20 25811106 25811486 -46342396 - MLT2D LTR ERVL 0 414 1 2739 115 33 9 chr20 25811897 25812316 -46341566 + MSTB1 LTR MaLR 1 429 -3 1710 173 23 3 chr20 25812362 25812663 -46341219 - AluSx SINE Alu -5 307 1 1824 231 123 15 chr20 25812707 25813187 -46340695 + MLT1H LTR MaLR 3 534 -15 3546 115 19 8 chr20 25813748 25814269 -46339613 + MER1A DNA MER1_type 1 527 0 311 280 195 28 chr20 25814703 25814877 -46339005 - MIR SINE MIR -56 152 19 1424 56 0 0 chr20 25815039 25815218 -46338664 + AluY SINE Alu 133 311 0 2240 43 11 0 chr20 25816786 25817088 -46336794 - AluY SINE Alu 0 305 1 207 189 11 44 chr20 25817718 25817808 -46336074 + G-rich Low_complexity Low_complexity 5 91 0 187 186 17 17 chr20 25817810 25817869 -46336013 + GA-rich Low_complexity Low_complexity 3 61 0 1793 143 7 20 chr20 25818496 25818790 -46335092 - AluSx SINE Alu -22 290 1 1080 198 12 65 chr20 25819299 25819547 -46334335 + MER8 DNA MER2_type 2 236 -3 284 366 6 0 chr20 25820668 25820840 -46333042 + (TG)n Simple_repeat Simple_repeat 1 173 0 321 256 173 51 chr20 25822130 25822286 -46331596 + MER5A DNA MER1_type 9 183 -6 987 176 0 0 chr20 25822552 25822722 -46331160 - AluJo SINE Alu -28 284 115 31 0 0 0 chr20 25822729 25822760 -46331122 + AT_rich Low_complexity Low_complexity 1 31 0 737 154 49 16 chr20 25822763 25822886 -46330996 - AluJo SINE Alu -174 128 2 244 254 99 63 chr20 25822891 25823033 -46330849 - L2 LINE L2 -56 3257 3111 202 333 121 20 chr20 25823130 25823229 -46330653 + L3b LINE CR1 1475 1583 0 28 29 0 0 chr20 25824098 25824133 -46329749 + AT_rich Low_complexity Low_complexity 1 35 0 1268 148 125 43 chr20 25824137 25824393 -46329489 - AluJo SINE Alu -30 282 6 2155 140 135 5 chr20 25824435 25824814 -46329068 - MSTA LTR MaLR 0 428 1 6952 164 12 13 chr20 25824814 25825967 -46327915 - MSTA-int LTR MaLR 0 1580 429 862 182 0 0 chr20 25826988 25827136 -46326746 - MSTA-int LTR MaLR -1167 484 337 33 25 0 0 chr20 25827136 25827176 -46326706 + AT_rich Low_complexity Low_complexity 1 40 0 672 124 0 0 chr20 25827181 25827270 -46326612 - AluJ/FLAM SINE Alu -222 90 2 2326 128 3 0 chr20 25827270 25827621 -46326261 - MSTA-int LTR MaLR -1299 352 1 2321 110 131 8 chr20 25827621 25828002 -46325880 - MSTA LTR MaLR 0 428 1 192 289 118 37 chr20 25828771 25828906 -46324976 - L2 LINE L2 -837 2477 2332 271 229 0 0 chr20 25828944 25829005 -46324877 + (TA)n Simple_repeat Simple_repeat 1 61 0 2411 57 0 0 chr20 25829905 25830202 -46323680 + AluY SINE Alu 1 297 -14 284 310 146 57 chr20 25830804 25830962 -46322920 - L2 LINE L2 -4 3268 3097 201 341 38 73 chr20 25831009 25831074 -46322808 - L2 LINE L2 -510 2804 2738 2213 115 0 0 chr20 25831074 25831379 -46322503 - AluSx SINE Alu -3 309 5 201 341 38 73 chr20 25831379 25831574 -46322308 - L2 LINE L2 -576 2738 2553 318 26 0 0 chr20 25832180 25832219 -46321663 + (CA)n Simple_repeat Simple_repeat 1 39 0 1918 149 0 0 chr20 25833952 25834247 -46319635 - AluSx SINE Alu -17 295 1 739 194 10 75 chr20 25834540 25834741 -46319141 - L1MA10 LINE L1 -1 6333 6146 839 224 36 0 chr20 25835837 25836033 -46317849 - MER3 DNA MER1_type -6 203 1 1464 158 55 48 chr20 25837174 25837334 -46316548 - AluJo SINE Alu -19 293 129 2081 78 10 26 chr20 25837334 25837640 -46316242 - AluY SINE Alu -10 301 1 1464 158 55 48 chr20 25837640 25837770 -46316112 - AluJo SINE Alu -183 129 1 381 283 141 4 chr20 25838566 25838765 -46315117 + MIR SINE MIR 30 262 0 1700 155 20 3 chr20 25839105 25839223 -46314659 + AluJb SINE Alu 1 116 -196 234 91 0 0 chr20 25839223 25839256 -46314626 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 1700 155 20 3 chr20 25839256 25839434 -46314448 + AluJb SINE Alu 116 302 -10 498 193 175 0 chr20 25840395 25840509 -46313373 + MIR SINE MIR 123 256 -6 348 321 78 37 chr20 25841274 25841517 -46312365 - MIR SINE MIR -9 253 1 2472 53 0 0 chr20 25841933 25842237 -46311645 - AluY SINE Alu -7 304 1 2003 161 85 0 chr20 25842344 25842734 -46311148 + Charlie4a DNA MER1_type 20 442 -66 23 0 0 0 chr20 25842922 25842945 -46310937 + AT_rich Low_complexity Low_complexity 1 23 0 336 264 47 16 chr20 25843779 25843908 -46309974 - MER94 DNA DNA 0 134 2 243 279 121 55 chr20 25845308 25845746 -46308136 + L1M4 LINE L1 2254 2720 -3426 516 288 88 18 chr20 25845890 25846220 -46307662 + L1M4 LINE L1 2786 3138 -3008 2018 115 3 3 chr20 25846366 25846670 -46307212 + AluJb SINE Alu 7 310 -2 434 228 35 76 chr20 25847102 25847299 -46306583 - L1ME3A LINE L1 -228 5942 5754 1011 194 14 67 chr20 25847307 25847591 -46306291 - L1MA7 LINE L1 -9 6282 6014 275 273 197 8 chr20 25849168 25849300 -46304582 + MIR3 SINE MIR 33 189 -19 465 270 107 64 chr20 25849392 25849523 -46304359 + MIR SINE MIR 20 167 -95 1878 171 0 0 chr20 25849523 25849833 -46304049 + AluJb SINE Alu 1 310 -2 465 270 107 64 chr20 25849833 25849934 -46303948 + MIR SINE MIR 167 262 0 372 267 29 0 chr20 25850036 25850141 -46303741 + MLT1J2 LTR MaLR 33 140 -310 317 284 42 79 chr20 25850186 25850376 -46303506 + MLT1J LTR MaLR 242 463 -22 548 136 23 0 chr20 25850391 25850479 -46303403 - AluJb SINE Alu -3 309 220 * 843 145 110 0 chr20 25850472 25850617 -46303265 - AluJb SINE Alu -148 164 4 30 45 0 30 chr20 25850654 25850686 -46303196 + AT_rich Low_complexity Low_complexity 1 32 -32 1460 191 7 28 chr20 25850686 25850974 -46302908 + AluJo SINE Alu 1 282 -30 30 45 0 30 chr20 25850974 25851007 -46302875 + AT_rich Low_complexity Low_complexity 32 64 0 40 21 0 0 chr20 25851389 25851436 -46302446 + AT_rich Low_complexity Low_complexity 1 47 0 248 368 81 19 chr20 25851820 25852127 -46301755 - L2 LINE L2 -559 2755 2430 441 0 0 0 chr20 25852382 25852431 -46301451 + (TG)n Simple_repeat Simple_repeat 2 50 0 384 294 91 43 chr20 25853036 25853223 -46300659 + MIR SINE MIR 48 243 -19 305 263 33 33 chr20 25853958 25854110 -46299772 + L1MC4a LINE L1 4902 5053 -1093 2209 157 111 0 chr20 25854146 25854553 -46299329 - LTR47A LTR ERVL 0 452 1 3223 247 61 14 chr20 25854569 25855547 -46298335 + L1MC4a LINE L1 5254 6277 -1531 508 301 203 8 chr20 25856015 25856404 -46297478 - L2 LINE L2 -13 3300 2836 21 0 0 0 chr20 25856731 25856752 -46297130 + AT_rich Low_complexity Low_complexity 1 21 0 2054 134 16 3 chr20 25857828 25858212 -46295670 + AluSx SINE Alu 1 388 0 377 146 27 36 chr20 25859165 25859275 -46294607 + (CATA)n Simple_repeat Simple_repeat 3 111 0 974 183 154 8 chr20 25862210 25862450 -46291432 + L1MC2 LINE L1 6029 6303 -41 22 0 0 0 chr20 25862495 25862517 -46291365 + AT_rich Low_complexity Low_complexity 1 22 0 771 103 8 17 chr20 25862517 25862634 -46291248 + AluY SINE Alu 23 138 -173 2277 117 0 0 chr20 25862645 25862954 -46290928 + AluSx SINE Alu 1 309 -3 21 57 0 0 chr20 25862955 25862990 -46290892 + AT_rich Low_complexity Low_complexity 1 35 0 475 159 34 0 chr20 25863627 25863715 -46290167 + AluSg/x SINE Alu 205 295 -15 1260 259 227 8 chr20 25864324 25864796 -46289086 + MLT1E1 LTR MaLR 19 654 0 1032 258 101 21 chr20 25865269 25865657 -46288225 + MLT1J2 LTR MaLR 9 427 -23 22 0 0 0 chr20 25865869 25865891 -46287991 + AT_rich Low_complexity Low_complexity 1 22 0 1920 132 3 17 chr20 25865999 25866286 -46287596 - AluJb SINE Alu -29 283 1 218 370 67 0 chr20 25866595 25866714 -46287168 + L2 LINE L2 3146 3272 0 2364 62 0 17 chr20 25867182 25867473 -46286409 + AluSx SINE Alu 1 286 -26 219 114 0 0 chr20 25867475 25867510 -46286372 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 1198 219 39 82 chr20 25867638 25868103 -46285779 + LTR56 LTR ERV1 1 445 0 2280 110 0 3 chr20 25868522 25868831 -46285051 + AluSg SINE Alu 1 308 -2 2138 153 42 11 chr20 25870761 25871115 -46282767 + MLT1A1 LTR MaLR 1 365 0 42 89 0 0 chr20 25871886 25871998 -46281884 + AT_rich Low_complexity Low_complexity 1 112 0 1035 246 59 42 chr20 25872136 25872365 -46281517 - MER115 DNA AcHobo -11 682 445 2739 137 33 5 chr20 25872365 25872787 -46281095 - MER61C LTR ERV1 0 434 1 1035 246 59 42 chr20 25872787 25872846 -46281036 - MER115 DNA AcHobo -248 445 389 375 296 53 23 chr20 25872920 25873052 -46280830 - MER115 DNA AcHobo -434 259 124 * 542 277 191 41 chr20 25873050 25873364 -46280518 + LTR16B LTR ERVL 104 464 0 2500 85 0 0 chr20 25873475 25873781 -46280101 - AluY SINE Alu -5 306 1 579 177 69 15 chr20 25873792 25873922 -46279960 - L1MD2 LINE L1 -2 6357 6221 538 313 13 31 chr20 25873925 25874149 -46279733 + L2 LINE L2 2199 2418 -896 411 315 0 0 chr20 25874229 25874337 -46279545 + L2 LINE L2 3206 3313 0 253 98 20 20 chr20 25874555 25874606 -46279276 + (TTCC)n Simple_repeat Simple_repeat 1 51 0 2238 127 0 0 chr20 25874813 25875113 -46278769 - AluSg SINE Alu -10 300 1 726 283 97 4 chr20 25875167 25875393 -46278489 + MIR SINE MIR 3 249 -13 1101 252 86 16 chr20 25876556 25876870 -46277012 - LTR16C LTR ERVL -2 489 154 303 149 0 0 chr20 25876926 25876973 -46276909 - MLT1H LTR MaLR -2 547 501 25 0 0 0 chr20 25876992 25877017 -46276865 + AT_rich Low_complexity Low_complexity 1 25 0 268 276 77 83 chr20 25877191 25877347 -46276535 - MLT1H LTR MaLR -274 275 121 382 186 0 12 chr20 25877354 25877440 -46276442 - MER53 DNA DNA -1 188 104 2436 188 33 39 chr20 25877451 25877494 -46276388 - MLT2B2 LTR ERVL -1 514 472 835 26 64 13 chr20 25877494 25877650 -46276232 + (TAGA)n Simple_repeat Simple_repeat 3 166 0 2436 188 33 39 chr20 25877650 25878123 -46275759 - MLT2B2 LTR ERVL -43 472 1 180 111 0 0 chr20 25878989 25879016 -46274866 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 283 298 61 15 chr20 25879641 25879772 -46274110 - MIR3 SINE MIR -12 196 60 379 314 22 7 chr20 25879782 25879919 -46273963 - LTR16A1 LTR ERVL 0 457 319 260 26 0 26 chr20 25880077 25880115 -46273767 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1235 141 31 16 chr20 25880786 25880977 -46272905 + AluJo SINE Alu 1 194 -118 1294 159 0 5 chr20 25880977 25881197 -46272685 - MER83B LTR ERV1 0 378 160 628 144 303 0 chr20 25881195 25881327 -46272555 + LTR39 LTR ERV1 183 354 -429 * 1613 154 85 13 chr20 25881319 25881624 -46272258 + LTR39 LTR ERV1 457 783 0 656 104 83 0 chr20 25881624 25881719 -46272163 + MER89 LTR ERV1 242 344 -215 1903 182 30 14 chr20 25881728 25881826 -46272056 - MER61B LTR ERV1 -29 396 301 459 0 0 0 chr20 25881826 25881877 -46272005 + (CA)n Simple_repeat Simple_repeat 2 52 0 1903 182 30 14 chr20 25881877 25882141 -46271741 - MER61B LTR ERV1 -124 301 28 1145 200 23 0 chr20 25882223 25882438 -46271444 + MER89 LTR ERV1 340 559 0 225 247 0 25 chr20 25882453 25882534 -46271348 + L1P4 LINE L1 5362 5440 -734 464 249 124 12 chr20 25882549 25882786 -46271096 + L1M2 LINE L1 5564 5828 -303 2234 170 23 9 chr20 25883444 25883874 -46270008 + LTR1B LTR ERV1 1 436 -390 696 223 198 0 chr20 25883869 25884071 -46269811 + LTR1B LTR ERV1 585 826 0 * 428 218 18 36 chr20 25884305 25884415 -46269467 - LTR36 LTR ERV1 -57 554 447 242 54 0 27 chr20 25884418 25884455 -46269427 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 741 135 9 0 chr20 25884455 25884566 -46269316 - FRAM SINE Alu -28 148 37 568 171 121 200 chr20 25884586 25884901 -46268981 - LTR36 LTR ERV1 -198 413 124 2047 155 0 0 chr20 25886409 25886700 -46267182 - AluSx SINE Alu -21 291 1 1372 280 55 12 chr20 25886908 25887311 -46266571 - LTR16C LTR ERVL 0 491 72 6562 220 73 32 chr20 25888385 25891012 -46262870 + L1M4 LINE L1 1 2863 -3962 5042 207 37 22 chr20 25890996 25892213 -46261669 + L1M4 LINE L1 4542 5776 -868 * 228 311 22 0 chr20 25892232 25892322 -46261560 + L2 LINE L2 2992 3083 -189 211 229 114 48 chr20 25893101 25893206 -46260676 - L3 LINE CR1 -174 1403 1292 748 296 86 44 chr20 25894300 25894962 -46258920 + L1M4 LINE L1 4446 5135 -1011 2276 179 82 10 chr20 25895044 25895531 -46258351 - MER63C DNA MER1_type -408 522 1 44 20 0 0 chr20 25895664 25895715 -46258167 + AT_rich Low_complexity Low_complexity 1 51 0 1248 240 48 67 chr20 25896345 25896370 -46257512 + LTR16A1 LTR ERVL 3 27 -430 2512 129 3 3 chr20 25896370 25896734 -46257148 - THE1B LTR MaLR 0 364 1 1248 240 48 67 chr20 25896734 25897170 -46256712 + LTR16A1 LTR ERVL 27 455 -2 335 271 29 0 chr20 25897935 25898075 -46255807 + L1M4 LINE L1 3630 3773 -2871 25 0 0 0 chr20 25898271 25898296 -46255586 + AT_rich Low_complexity Low_complexity 1 25 0 299 145 277 0 chr20 25898362 25898445 -46255437 - LTR16C LTR ERVL -3 488 383 682 285 142 24 chr20 25898546 25898956 -46254926 + MLT1H1 LTR MaLR 91 548 -7 426 228 81 13 chr20 25898987 25899136 -46254746 - LTR16C LTR ERVL -160 331 173 242 308 56 30 chr20 25899282 25899480 -46254402 + L2 LINE L2 2846 3048 -224 592 264 49 79 chr20 25899481 25899746 -46254136 - MLT1K LTR MaLR -1 587 331 512 252 131 19 chr20 25900413 25900589 -46253293 - L1ME3A LINE L1 -9 6161 5956 1877 121 0 0 chr20 25900589 25900903 -46252979 - AluSx SINE Alu 0 338 25 512 252 131 19 chr20 25900903 25900931 -46252951 - L1ME3A LINE L1 -214 5956 5933 * 1412 218 35 13 chr20 25900914 25901244 -46252638 - L1ME3A LINE L1 -339 5831 5516 207 69 0 0 chr20 25901329 25901358 -46252524 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 293 358 71 8 chr20 25902069 25902337 -46251545 + L2 LINE L2 2025 2309 -1005 604 267 12 12 chr20 25902528 25902700 -46251182 + LTR16A1 LTR ERVL 267 438 -19 477 311 0 6 chr20 25902910 25903087 -46250795 + C-rich Low_complexity Low_complexity 2 177 0 470 285 149 46 chr20 25903218 25903541 -46250341 + MLT1J2 LTR MaLR 64 419 -31 209 314 71 18 chr20 25903569 25903738 -46250144 + L2 LINE L2 2558 2735 -579 496 255 180 15 chr20 25906114 25906314 -46247568 - MIR SINE MIR -21 241 9 1862 205 79 15 chr20 25906360 25906858 -46247024 + L1ME3A LINE L1 5631 6163 -7 24 0 0 0 chr20 25907376 25907400 -46246482 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr20 25908029 25908051 -46245831 + AT_rich Low_complexity Low_complexity 1 22 0 974 117 7 0 chr20 25908051 25908196 -46245686 - L1PB1 LINE L1 -1 6150 6005 189 0 0 0 chr20 25908466 25908487 -46245395 + (TG)n Simple_repeat Simple_repeat 2 22 0 1884 274 69 8 chr20 25908529 25909120 -46244762 - L1ME3A LINE L1 -5 6165 5539 243 0 0 0 chr20 25909478 25909505 -46244377 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1624 193 69 33 chr20 25910190 25910640 -46243242 - MLT1C LTR MaLR -1 466 1 1031 300 50 5 chr20 25910645 25911025 -46242857 - LTR16A1 LTR ERVL 0 457 61 1197 143 29 29 chr20 25911257 25911466 -46242416 + Tigger2a DNA MER2_type 1 209 -225 539 185 22 0 chr20 25911476 25911568 -46242314 - FRAM SINE Alu -60 116 23 1117 60 16 28 chr20 25911596 25911778 -46242104 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 490 211 54 27 chr20 25911788 25911811 -46242071 + Tigger2a DNA MER2_type 197 218 -2500 1458 194 92 0 chr20 25911811 25912095 -46241787 - AluJo SINE Alu -2 310 1 490 211 54 27 chr20 25912095 25912218 -46241664 + Tigger2a DNA MER2_type 218 347 -97 392 219 76 62 chr20 25912265 25912475 -46241407 + LTR16C LTR ERVL 245 491 0 2498 200 80 26 chr20 25912682 25913342 -46240540 - L1ME2 LINE L1 -8 6156 5461 243 229 82 0 chr20 25913687 25913748 -46240134 + MLT1H LTR MaLR 479 544 -5 232 246 16 0 chr20 25914395 25914456 -46239426 + (CATA)n Simple_repeat Simple_repeat 3 64 0 221 200 30 180 chr20 25915702 25915802 -46238080 + MIR SINE MIR 144 228 -34 2365 110 0 0 chr20 25915847 25916157 -46237725 - AluY SINE Alu -1 310 1 61 27 0 0 chr20 25916200 25916275 -46237607 + AT_rich Low_complexity Low_complexity 1 75 0 205 333 15 0 chr20 25916609 25916675 -46237207 + L2 LINE L2 2992 3058 -214 564 237 62 77 chr20 25917090 25917284 -46236598 - MLT1H LTR MaLR -5 544 354 2210 143 0 0 chr20 25917424 25917732 -46236150 - AluSx SINE Alu -4 308 1 2163 104 7 7 chr20 25917833 25918130 -46235752 + AluSc SINE Alu 1 297 -12 2354 110 0 7 chr20 25919081 25919391 -46234491 + AluSq SINE Alu 1 308 -5 2263 125 3 0 chr20 25919400 25919712 -46234170 + AluSq SINE Alu 1 313 0 1949 148 0 0 chr20 25920083 25920360 -46233522 + AluSx SINE Alu 4 280 -32 222 62 0 0 chr20 25920362 25920394 -46233488 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 493 230 163 43 chr20 25921486 25921558 -46232324 + MIR SINE MIR 12 74 -188 2657 94 17 8 chr20 25921558 25921919 -46231963 - THE1B LTR MaLR 0 364 1 493 230 163 43 chr20 25921919 25922055 -46231827 + MIR SINE MIR 74 245 -17 843 248 232 50 chr20 25922659 25923134 -46230748 - MLT1G1 LTR MaLR -34 561 1 508 268 120 2 chr20 25923736 25924029 -46229853 + LTR16C LTR ERVL 107 487 -4 316 289 115 26 chr20 25924272 25924428 -46229454 + MIR SINE MIR 87 256 -6 2159 122 55 19 chr20 25924580 25924942 -46228940 + THE1C LTR MaLR 1 375 0 273 320 0 29 chr20 25925209 25925312 -46228570 - MLT1K LTR MaLR -346 242 143 948 224 161 70 chr20 25925650 25926192 -46227690 - LTR50 LTR ERVL -25 770 90 479 154 152 11 chr20 25926205 25926297 -46227585 - MER66A LTR ERV1 -9 542 388 715 185 104 116 chr20 25926411 25926755 -46227127 - MER41B LTR ERV1 -129 506 114 279 254 0 0 chr20 25926757 25926824 -46227058 - LTR50 LTR ERVL -727 68 2 204 279 16 0 chr20 25928392 25928453 -46225429 + GA-rich Low_complexity Low_complexity 2 63 0 1406 226 17 20 chr20 25929431 25929723 -46224159 + AluJo SINE Alu 1 291 -11 412 271 57 0 chr20 25929815 25929937 -46223945 - L2 LINE L2 0 3313 3185 2418 107 0 0 chr20 25930288 25930598 -46223284 - AluSq SINE Alu -3 310 1 1713 168 41 0 chr20 25930857 25931149 -46222733 + AluJo SINE Alu 9 312 0 207 0 0 0 chr20 25931936 25931959 -46221923 + (A)n Simple_repeat Simple_repeat 1 23 0 355 235 0 0 chr20 25932508 25932593 -46221289 - L1PB4 LINE L1 -3 6153 6069 3341 191 10 10 chr20 25932593 25933312 -46220570 + L1 LINE L1 4368 5086 -1060 823 147 7 15 chr20 25934083 25934219 -46219663 + AluJo SINE Alu 1 135 -177 567 281 4 62 chr20 25934358 25934600 -46219282 - L2 LINE L2 -5 3308 3081 246 32 0 0 chr20 25935055 25935086 -46218796 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 348 24 0 0 chr20 25935534 25935575 -46218307 + (TG)n Simple_repeat Simple_repeat 1 41 0 265 338 45 8 chr20 25936549 25936682 -46217200 + MIR SINE MIR 118 255 -7 2120 136 0 16 chr20 25936991 25937300 -46216582 + AluSx SINE Alu 1 304 -8 449 224 56 126 chr20 25937469 25937525 -46216357 - L2 LINE L2 -4 3309 3251 907 169 87 31 chr20 25937525 25937720 -46216162 + MER3 DNA MER1_type 1 206 -3 449 224 56 126 chr20 25937720 25937877 -46216005 - L2 LINE L2 -62 3251 3111 204 255 0 0 chr20 25938694 25938741 -46215141 + T-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr20 25939525 25939546 -46214336 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 25942702 25942725 -46211157 + (GA)n Simple_repeat Simple_repeat 1 23 0 484 265 127 0 chr20 25944706 25944895 -46208987 - MIR SINE MIR -9 253 41 2426 96 0 0 chr20 25945063 25945375 -46208507 + AluSq SINE Alu 1 312 -1 1888 208 87 21 chr20 25946265 25946737 -46207145 - MLT1D LTR MaLR -2 503 1 216 97 0 0 chr20 25946772 25946803 -46207079 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 190 308 217 23 chr20 25946823 25947044 -46206838 - L2 LINE L2 -45 3227 2964 1773 194 0 7 chr20 25947271 25947580 -46206302 - AluJo SINE Alu -5 307 1 1283 221 54 19 chr20 25947645 25947962 -46205920 + L1MC4 LINE L1 7259 7586 -456 * 2547 168 72 23 chr20 25947957 25948481 -46205401 - L1MB8 LINE L1 -205 5973 5424 364 73 55 0 chr20 25948478 25948533 -46205349 + L1MC4 LINE L1 7985 8042 0 * 233 321 136 22 chr20 25949036 25949220 -46204662 - L3 LINE CR1 -1138 439 235 930 289 73 47 chr20 25949432 25949691 -46204191 + L2 LINE L2 2414 2665 -648 2180 107 34 0 chr20 25949691 25949982 -46203900 - AluSg SINE Alu -9 301 1 930 289 73 47 chr20 25949982 25950330 -46203552 + L2 LINE L2 2665 3051 -262 2426 89 0 3 chr20 25950330 25950634 -46203248 - AluSx SINE Alu -9 303 1 930 289 73 47 chr20 25950634 25950904 -46202978 + L2 LINE L2 3051 3312 -1 319 264 25 25 chr20 25951047 25951168 -46202714 - LTR16C LTR ERVL 0 491 371 1948 358 60 2 chr20 25951722 25952641 -46201241 - ERVL LTR ERVL -708 5056 4085 254 297 11 0 chr20 25952704 25952795 -46201087 - ERVL LTR ERVL -1778 3986 3895 676 230 14 0 chr20 25952798 25952949 -46200933 - L1PB4 LINE L1 -58 6096 5945 1037 82 7 41 chr20 25953080 25953227 -46200655 - THE1C LTR MaLR 0 375 234 5011 192 29 14 chr20 25953229 25953965 -46199917 - L1PB4 LINE L1 -1004 5142 4383 351 44 0 0 chr20 25953965 25954010 -46199872 + (TG)n Simple_repeat Simple_repeat 2 46 0 5011 192 29 14 chr20 25954010 25954355 -46199527 - L1PB4 LINE L1 -1763 4383 4045 1090 262 114 22 chr20 25954359 25954764 -46199118 - ERVL LTR ERVL -3328 2326 1885 630 285 70 0 chr20 25955284 25955470 -46198412 - LTR16C LTR ERVL -1 490 292 372 189 14 0 chr20 25956803 25956877 -46197005 - MLT1K LTR MaLR -2 586 512 186 311 0 0 chr20 25957325 25957370 -46196512 + MIR3 SINE MIR 141 185 -23 263 28 28 0 chr20 25957781 25957817 -46196065 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 288 290 156 37 chr20 25958320 25958638 -46195244 - MLT1J1 LTR MaLR -20 430 65 308 284 11 11 chr20 25959453 25959548 -46194334 - MER94 DNA DNA -35 99 5 6031 174 24 28 chr20 25959659 25960162 -46193720 + L1MC2 LINE L1 4574 5078 -1266 1973 141 10 7 chr20 25960162 25960453 -46193429 - AluJo SINE Alu -20 292 1 6031 174 24 28 chr20 25960453 25960809 -46193073 + L1MC2 LINE L1 5078 5434 -910 2360 80 0 0 chr20 25960809 25961096 -46192786 + AluY SINE Alu 1 287 -24 180 0 0 0 chr20 25961099 25961119 -46192763 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6031 174 24 28 chr20 25961119 25962031 -46191851 + L1MC2 LINE L1 5436 6343 -1 24 67 0 0 chr20 25962191 25962236 -46191646 + AT_rich Low_complexity Low_complexity 1 45 0 279 259 205 0 chr20 25962323 25962435 -46191447 - MIR SINE MIR -44 218 84 599 170 36 79 chr20 25963097 25963148 -46190734 - LTR16C LTR ERVL 0 491 439 1593 216 52 3 chr20 25963148 25963496 -46190386 - MLT1A1 LTR MaLR 0 365 1 599 170 36 79 chr20 25963496 25963609 -46190273 - LTR16C LTR ERVL -52 439 334 419 217 52 0 chr20 25963776 25963891 -46189991 - LTR16C LTR ERVL -11 480 360 1767 251 86 48 chr20 25966318 25966440 -46187442 + L1ME3A LINE L1 5485 5601 -569 383 84 28 14 chr20 25966440 25966511 -46187371 - L1MA4A LINE L1 -5 6298 6227 1767 251 86 48 chr20 25966511 25966795 -46187087 + L1ME3A LINE L1 5601 5873 -297 2160 122 0 19 chr20 25966795 25967106 -46186776 + AluSp SINE Alu 1 305 -8 1767 251 86 48 chr20 25967106 25967351 -46186531 + L1ME3A LINE L1 5873 6162 -8 1370 150 18 0 chr20 25967425 25967651 -46186231 + L1PA16 LINE L1 5928 6157 -9 1807 63 0 5 chr20 25968284 25968507 -46185375 + AluY SINE Alu 77 298 -13 2281 103 3 0 chr20 25968521 25968812 -46185070 + AluSx SINE Alu 3 294 -18 664 273 5 16 chr20 25968988 25969182 -46184700 + MIR SINE MIR 65 256 -6 265 242 251 24 chr20 25969589 25969800 -46184082 + MLT1I LTR MaLR 66 324 -122 432 288 46 75 chr20 25972350 25972590 -46181292 - LTR16A1 LTR ERVL -4 453 221 2292 181 74 27 chr20 25972853 25972887 -46180995 + MLT1F LTR MaLR 4 35 -507 3195 91 18 7 chr20 25972887 25973326 -46180556 - MLT2A1 LTR ERVL 0 444 1 2292 181 74 27 chr20 25973326 25973806 -46180076 + MLT1F LTR MaLR 35 542 0 236 315 51 67 chr20 25974287 25974406 -46179476 + MLT1L LTR MaLR 220 337 -278 1657 115 21 80 chr20 25974406 25974745 -46179137 - L1MA2 LINE L1 0 6304 5986 236 315 51 67 chr20 25974745 25974803 -46179079 + MLT1L LTR MaLR 337 394 -221 458 225 124 52 chr20 25974957 25975164 -46178718 - MLT1H1 LTR MaLR -10 532 313 407 101 31 57 chr20 25975246 25975405 -46178477 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 932 252 44 32 chr20 25975405 25975655 -46178227 - MLT1H1 LTR MaLR -302 253 1 525 277 55 32 chr20 25976029 25976339 -46177543 - LTR16C LTR ERVL 0 491 149 816 101 31 0 chr20 25976933 25977062 -46176820 - L1MB3 LINE L1 -3 6180 6048 1885 166 47 0 chr20 25977208 25977552 -46176330 - L1PB4 LINE L1 -4 6152 5793 195 204 0 0 chr20 25977642 25977686 -46176196 + (TATG)n Simple_repeat Simple_repeat 2 45 0 464 122 81 16 chr20 25977767 25978203 -46175679 + (TA)n Simple_repeat Simple_repeat 1 464 0 1033 209 156 73 chr20 25978289 25978686 -46175196 - MLT1H LTR MaLR 0 549 120 2372 93 3 3 chr20 25979166 25979478 -46174404 - AluSq SINE Alu -1 312 1 2179 136 18 12 chr20 25979923 25980261 -46173621 + MER47A DNA MER2_type 27 366 0 323 253 0 0 chr20 25980266 25980345 -46173537 + MER116 DNA Mariner 2 80 0 502 238 79 50 chr20 25980373 25980396 -46173486 - L1MC4a LINE L1 -1905 5903 5882 1849 161 7 3 chr20 25980396 25980695 -46173187 - AluJo SINE Alu -12 300 1 502 238 79 50 chr20 25980695 25980873 -46173009 - L1MC4a LINE L1 -1926 5882 5696 453 229 0 9 chr20 25981225 25981330 -46172552 + MIR SINE MIR 40 143 -119 2086 108 0 7 chr20 25981798 25982075 -46171807 - AluSx SINE Alu -11 301 27 2793 215 64 71 chr20 25982217 25982981 -46170901 - MER21B LTR ERV1 -57 806 48 365 238 0 12 chr20 25983027 25983107 -46170775 - MER21B LTR ERV1 -773 90 12 393 234 121 0 chr20 25983175 25983299 -46170583 - HAL1b LINE L1 -2 1346 1208 529 214 34 0 chr20 25983427 25983544 -46170338 + L2 LINE L2 3186 3306 -7 933 167 0 0 chr20 25983575 25983713 -46170169 + FRAM SINE Alu 14 151 -25 554 243 106 34 chr20 25983750 25984042 -46169840 - HAL1b LINE L1 -971 377 65 1426 247 94 35 chr20 25985864 25986261 -46167621 + MLT1G1 LTR MaLR 10 490 -105 1627 162 55 87 chr20 25986261 25986663 -46167219 - MLT1B LTR MaLR -1 389 1 1426 247 94 35 chr20 25986663 25986760 -46167122 + MLT1G1 LTR MaLR 490 580 -15 558 255 50 6 chr20 25987222 25987383 -46166499 + MIR SINE MIR 8 175 -87 334 301 0 0 chr20 25987540 25987633 -46166249 - L2 LINE L2 0 3313 3221 1067 245 24 27 chr20 25988326 25988624 -46165258 + LTR16C LTR ERVL 193 489 -2 270 73 0 0 chr20 25991651 25991692 -46162190 + (CA)n Simple_repeat Simple_repeat 1 41 0 585 0 0 0 chr20 25994256 25994321 -46159561 + (TA)n Simple_repeat Simple_repeat 2 66 0 36 19 0 19 chr20 25994753 25994783 -46159099 + AT_rich Low_complexity Low_complexity 1 31 -22 1548 167 4 16 chr20 25994783 25995041 -46158841 + AluJb SINE Alu 35 289 -23 36 19 0 19 chr20 25995041 25995064 -46158818 + AT_rich Low_complexity Low_complexity 31 53 0 360 211 142 83 chr20 25995327 25995545 -46158337 + MLT1H LTR MaLR 249 479 -70 219 88 0 0 chr20 25995835 25995869 -46158013 + (TG)n Simple_repeat Simple_repeat 2 35 0 295 217 43 0 chr20 25996263 25996332 -46157550 + MLT1K LTR MaLR 508 579 -9 931 97 20 3 chr20 25996929 25997092 -46156790 + L1MB3 LINE L1 5290 5451 -732 316 170 0 0 chr20 25997092 25997139 -46156743 + MER2 DNA MER2_type 299 345 0 1013 139 0 36 chr20 25997197 25997391 -46156491 - MER2 DNA MER2_type -112 233 47 1679 134 14 4 chr20 25997391 25997667 -46156215 + L1MB3 LINE L1 5905 6183 0 284 342 38 25 chr20 25997724 25997882 -46156000 + MIR SINE MIR 9 168 -94 300 271 0 47 chr20 25998583 25998690 -46155192 + MIR SINE MIR 107 208 -54 2669 22 0 29 chr20 25998814 25999129 -46154753 + AluY SINE Alu 1 306 -5 734 210 14 7 chr20 25999130 25999273 -46154609 - FRAM SINE Alu -32 144 1 2236 111 0 10 chr20 26000120 26000426 -46153456 + AluSx SINE Alu 1 303 -9 246 363 0 24 chr20 26002235 26002358 -46151524 - MIR SINE MIR -55 153 41 1129 282 95 38 chr20 26002743 26003601 -46150281 + L1MEc LINE L1 125 982 -5223 191 219 49 0 chr20 26003930 26003971 -46149911 + MIR SINE MIR 40 82 -180 1098 218 98 109 chr20 26003991 26004061 -46149821 - MLT1J2 LTR MaLR -14 436 367 5936 102 17 7 chr20 26004061 26005143 -46148739 + L1PB2 LINE L1 5059 6149 -2 1098 218 98 109 chr20 26005143 26005513 -46148369 - MLT1J2 LTR MaLR -83 367 1 543 242 27 59 chr20 26005513 26005699 -46148183 + MIR SINE MIR 81 260 -2 239 79 26 0 chr20 26006083 26006121 -46147761 + (CA)n Simple_repeat Simple_repeat 1 39 0 2127 118 0 44 chr20 26007369 26007690 -46146192 - AluJb SINE Alu -5 307 1 2452 87 3 0 chr20 26008161 26008471 -46145411 + AluSq SINE Alu 1 311 -2 338 295 36 36 chr20 26008885 26009024 -46144858 - MIR SINE MIR -32 230 92 834 231 17 0 chr20 26009594 26009767 -46144115 - MER5B DNA MER1_type -2 176 1 2550 61 0 0 chr20 26010002 26010299 -46143583 + AluY SINE Alu 1 297 -14 3585 59 0 0 chr20 26010308 26010731 -46143151 + L1PA6 LINE L1 5726 6148 -6 2059 137 0 36 chr20 26010749 26011141 -46142741 - Tigger3(Golem) DNA MER2_type -1 3028 2 422 277 87 78 chr20 26011715 26012009 -46141873 + MLT1H LTR MaLR 57 358 -191 1893 202 16 21 chr20 26012009 26012385 -46141497 + MLT1A2 LTR MaLR 1 374 0 422 277 87 78 chr20 26012385 26012563 -46141319 + MLT1H LTR MaLR 358 533 -16 379 279 58 0 chr20 26012598 26012702 -46141180 + L2 LINE L2 3200 3309 -4 1135 204 8 191 chr20 26012784 26013294 -46140588 - MLT2B1 LTR ERVL -2 518 137 1537 129 71 0 chr20 26013294 26013518 -46140364 + AluSx SINE Alu 53 292 -20 1135 204 8 191 chr20 26013518 26013620 -46140262 - MLT2B1 LTR ERVL -383 137 18 271 168 18 2 chr20 26014423 26014486 -46139396 - MLT2B1 LTR ERVL 0 464 410 500 90 26 0 chr20 26014488 26014566 -46139316 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 198 0 0 0 chr20 26014587 26014609 -46139273 + (GA)n Simple_repeat Simple_repeat 1 22 0 1223 161 99 0 chr20 26014612 26014823 -46139059 - MLT2B1 LTR ERVL -61 459 228 1604 162 48 42 chr20 26015041 26015345 -46138537 + THE1C LTR MaLR 1 309 -66 2101 131 3 3 chr20 26015345 26015642 -46138240 - AluSx SINE Alu -15 297 1 1604 162 48 42 chr20 26015642 26015695 -46138187 + THE1C LTR MaLR 309 360 -15 617 320 29 20 chr20 26015826 26016070 -46137812 - MIR SINE MIR 0 262 17 1156 265 17 33 chr20 26016225 26016587 -46137295 - LTR16C LTR ERVL -11 480 125 306 125 0 0 chr20 26017241 26017289 -46136593 + (TG)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr20 26018084 26018116 -46135766 + (CA)n Simple_repeat Simple_repeat 1 32 0 561 196 69 94 chr20 26018191 26018582 -46135300 + MLT1G LTR MaLR 107 555 0 647 283 92 7 chr20 26018645 26018917 -46134965 + LTR16C LTR ERVL 1 295 -196 188 277 15 15 chr20 26019703 26019768 -46134114 - MIR SINE MIR -1 261 197 641 279 6 45 chr20 26020191 26020370 -46133512 - MIR SINE MIR -88 174 3 272 363 0 0 chr20 26020693 26020795 -46133087 - MIR SINE MIR 0 262 161 580 213 103 43 chr20 26021612 26021865 -46132017 + LTR16A1 LTR ERVL 62 329 -128 219 69 0 0 chr20 26022202 26022231 -46131651 + (CA)n Simple_repeat Simple_repeat 2 30 0 367 272 139 48 chr20 26022232 26022541 -46131341 - LTR16C LTR ERVL 0 491 155 196 256 0 0 chr20 26022887 26022926 -46130956 - MIR3 SINE MIR -41 167 129 289 128 39 93 chr20 26023129 26023214 -46130668 - L1ME3 LINE L1 -160 6004 5925 1872 211 16 0 chr20 26023423 26023806 -46130076 - L1M4 LINE L1 -1028 5118 4730 507 229 89 0 chr20 26023795 26023939 -46129943 - L1ME3 LINE L1 -439 5731 5573 * 749 267 108 52 chr20 26024659 26025124 -46128758 - LTR16C LTR ERVL 0 491 1 244 351 53 26 chr20 26026611 26026725 -46127157 - L2 LINE L2 -3 3269 3153 732 162 60 0 chr20 26026803 26026920 -46126962 + FLAM_C SINE Alu 8 131 -12 195 217 22 0 chr20 26027099 26027145 -46126737 + MIR SINE MIR 128 174 -88 5145 245 124 21 chr20 26027337 26029369 -46124513 + Charlie7 DNA MER1_type 34 2274 -338 743 239 72 56 chr20 26029391 26029805 -46124077 - L1MC5 LINE L1 -305 7656 7236 298 298 0 12 chr20 26030670 26030754 -46123128 - HAL1 LINE L1 -636 1871 1789 363 222 20 0 chr20 26030800 26030899 -46122983 + L1ME3A LINE L1 5789 5889 -281 1251 192 255 31 chr20 26030917 26031501 -46122381 - HAL1 LINE L1 -739 1768 1054 922 261 43 40 chr20 26031508 26031569 -46122313 - L1ME3A LINE L1 -5 6559 6500 1886 161 3 3 chr20 26031569 26031867 -46122015 - AluJb SINE Alu -14 298 1 922 261 43 40 chr20 26031867 26032181 -46121701 - L1ME3A LINE L1 -64 6500 6183 640 265 63 0 chr20 26032197 26032386 -46121496 - L1ME3A LINE L1 -351 6213 6013 2043 164 21 102 chr20 26032386 26032509 -46121373 - MER66B LTR ERV1 0 486 355 1677 147 110 65 chr20 26032509 26032938 -46120944 - LTR7 LTR ERV1 -2 448 1 2043 164 21 102 chr20 26032938 26033343 -46120539 - MER66B LTR ERV1 -131 355 1 675 246 19 94 chr20 26033343 26033447 -46120435 - L1ME3A LINE L1 -551 6013 5903 2233 107 7 13 chr20 26033447 26033757 -46120125 + AluSq SINE Alu 1 308 -5 675 246 19 94 chr20 26033757 26033960 -46119922 - L1ME3A LINE L1 -661 5903 5724 301 252 91 43 chr20 26034049 26034106 -46119776 - L1ME3A LINE L1 -1006 5534 5481 2153 101 13 7 chr20 26034106 26034404 -46119478 + AluSx SINE Alu 1 300 -12 301 252 91 43 chr20 26034404 26035342 -46118540 - L1ME3A LINE L1 -1059 5481 4412 1550 254 50 10 chr20 26035410 26035812 -46118070 - MER70B LTR ERVL -157 421 4 3284 241 68 62 chr20 26035826 26037460 -46116422 - L1ME3A LINE L1 -2171 4369 2726 1366 132 3 14 chr20 26037458 26037651 -46116231 - L1MC/D LINE L1 -541 5627 5437 * 322 24 71 0 chr20 26037651 26037688 -46116194 + L1PA10 LINE L1 6121 6165 -3 1366 132 3 14 chr20 26037688 26037709 -46116173 - L1MC/D LINE L1 -731 5437 5417 734 288 34 7 chr20 26037713 26038008 -46115874 - L1ME3A LINE L1 -3948 2773 2471 637 280 57 76 chr20 26038219 26038327 -46115555 + L1MEc LINE L1 1727 1836 -4560 1041 208 23 14 chr20 26038327 26038543 -46115339 + MER20 DNA MER1_type 2 219 0 637 280 57 76 chr20 26038543 26039170 -46114712 + L1MEc LINE L1 1836 2448 -3948 284 48 71 0 chr20 26039195 26039237 -46114645 - L1PA10 LINE L1 -3 6165 6121 * 1384 109 0 10 chr20 26039232 26039425 -46114457 + L1P4 LINE L1 5437 5627 -541 1374 248 73 45 chr20 26039423 26040025 -46113857 + L1MEc LINE L1 2401 3019 -3196 * 503 273 110 46 chr20 26040040 26040412 -46113470 - L1MEc LINE L1 -4606 1934 1541 613 332 48 29 chr20 26040468 26040784 -46113098 - HAL1 LINE L1 -1728 779 458 904 284 90 39 chr20 26040827 26041311 -46112571 - L1M4 LINE L1 -2107 4039 3505 2730 77 13 52 chr20 26041311 26041386 -46112496 - THE1C LTR MaLR -2 373 297 2128 88 14 7 chr20 26041386 26041682 -46112200 + AluSg SINE Alu 1 298 -12 2730 77 13 52 chr20 26041682 26041994 -46111888 - THE1C LTR MaLR -78 297 1 904 284 90 39 chr20 26041994 26042228 -46111654 - L1M4 LINE L1 -2641 3505 3284 469 296 98 50 chr20 26042252 26042743 -46111139 - L1M4 LINE L1 -2922 3224 2758 1640 185 0 46 chr20 26042743 26043067 -46110815 - AluJb SINE Alu -3 309 1 469 296 98 50 chr20 26043067 26043113 -46110769 - L1M4 LINE L1 -3388 2758 2716 276 120 0 0 chr20 26043113 26043163 -46110719 + (TCTCTG)n Simple_repeat Simple_repeat 2 51 0 469 296 98 50 chr20 26043163 26043592 -46110290 - L1M4 LINE L1 -3430 2716 2210 521 211 1 70 chr20 26043713 26043871 -46110011 - L1MC4a LINE L1 -303 5818 5682 2350 93 0 0 chr20 26043871 26044172 -46109710 - AluSg SINE Alu -9 301 1 521 211 1 70 chr20 26044172 26044192 -46109690 - L1MC4a LINE L1 -439 5682 5662 462 237 79 13 chr20 26044264 26044416 -46109466 - LTR16C LTR ERVL 0 491 330 193 316 36 58 chr20 26044779 26044863 -46109019 + MIR SINE MIR 26 108 -154 1742 112 0 0 chr20 26044863 26045141 -46108741 - AluSx SINE Alu 0 330 53 193 316 36 58 chr20 26045141 26045194 -46108688 + MIR SINE MIR 108 161 -101 207 0 0 0 chr20 26045265 26045288 -46108594 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1654 159 4 18 chr20 26045292 26045568 -46108314 - AluJo SINE Alu -30 282 11 1755 147 7 47 chr20 26046065 26046364 -46107518 + AluJb SINE Alu 2 288 -24 1808 167 42 83 chr20 26047568 26047866 -46106016 - MLT1B LTR MaLR 0 390 112 2065 141 0 0 chr20 26047866 26048165 -46105717 - AluSx SINE Alu -13 299 1 1808 167 42 83 chr20 26048165 26048273 -46105609 - MLT1B LTR MaLR -278 112 1 544 245 50 40 chr20 26048380 26048580 -46105302 + Charlie5 DNA MER1_type 1 202 -2410 * 1232 172 42 11 chr20 26048579 26048841 -46105041 + Charlie5 DNA MER1_type 2355 2624 0 186 43 0 0 chr20 26049163 26049186 -46104696 + (T)n Simple_repeat Simple_repeat 1 23 0 1477 157 68 32 chr20 26049301 26049581 -46104301 + AluJo SINE Alu 10 299 -13 261 0 0 0 chr20 26050344 26050373 -46103509 + (TG)n Simple_repeat Simple_repeat 2 30 0 241 276 55 37 chr20 26050700 26050863 -46103019 + HAL1 LINE L1 2222 2387 -120 402 337 96 18 chr20 26051196 26051531 -46102351 + L2 LINE L2 2124 2484 -830 3043 240 43 46 chr20 26051650 26052349 -46101533 + L1MB3 LINE L1 4147 4846 -1316 2229 91 0 45 chr20 26052349 26052657 -46101225 - AluSp SINE Alu -19 294 1 3043 240 43 46 chr20 26052657 26052996 -46100886 + L1MB3 LINE L1 4846 5182 -980 691 221 15 0 chr20 26052996 26053127 -46100755 + FLAM_A SINE Alu 1 133 0 3043 240 43 46 chr20 26053127 26053396 -46100486 + L1MB3 LINE L1 5182 5450 -712 1643 135 4 8 chr20 26053404 26053664 -46100218 + L1MB3 LINE L1 5823 6081 -102 1218 216 67 52 chr20 26053664 26053821 -46100061 + MSTB2 LTR MaLR 64 217 -240 1815 176 3 0 chr20 26053821 26054127 -46099755 + AluJo SINE Alu 2 308 -4 1218 216 67 52 chr20 26054127 26054357 -46099525 + MSTB2 LTR MaLR 217 457 0 948 378 35 18 chr20 26054358 26055158 -46098724 + ERVL LTR ERVL 4531 5344 -420 258 327 10 19 chr20 26055406 26055510 -46098372 + LTR16A LTR ERVL 105 207 -243 1456 245 132 38 chr20 26055585 26055744 -46098138 - L2 LINE L2 -2 3311 3168 2133 114 10 10 chr20 26055744 26056050 -46097832 + AluSx SINE Alu 1 306 -6 1456 245 132 38 chr20 26056050 26056794 -46097088 - L2 LINE L2 -145 3168 2318 522 263 80 90 chr20 26056836 26057148 -46096734 + LTR16A1 LTR ERVL 147 455 -2 404 250 10 10 chr20 26057170 26057274 -46096608 - L2 LINE L2 -1042 2272 2169 1484 230 104 0 chr20 26057567 26057958 -46095924 + L1ME3A LINE L1 5719 6149 -21 2045 224 49 16 chr20 26057988 26058440 -46095442 - LTR40a LTR ERVL -52 467 1 542 109 0 68 chr20 26058600 26058873 -46095009 + (TA)n Simple_repeat Simple_repeat 1 254 0 589 83 0 89 chr20 26058895 26059210 -46094672 + (TA)n Simple_repeat Simple_repeat 1 286 0 308 102 0 34 chr20 26059238 26059297 -46094585 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 316 260 79 8 chr20 26059435 26059562 -46094320 - L1MC/D LINE L1 -1976 5832 5697 426 302 34 36 chr20 26059642 26059872 -46094010 - L1MC/D LINE L1 -539 5582 5357 316 275 12 72 chr20 26059878 26060045 -46093837 - MIR SINE MIR -30 232 76 557 309 96 53 chr20 26060066 26060464 -46093418 + MLT1J LTR MaLR 12 426 -85 351 96 0 0 chr20 26063177 26063229 -46090653 + (TG)n Simple_repeat Simple_repeat 2 53 0 321 272 64 85 chr20 26064966 26065201 -46088681 - MIR SINE MIR -12 250 21 437 176 0 24 chr20 26066825 26066910 -46086972 + FRAM SINE Alu 75 157 -19 2031 128 3 3 chr20 26066914 26067219 -46086663 + AluSx SINE Alu 3 307 0 918 241 165 35 chr20 26067219 26067625 -46086257 + MLT1H LTR MaLR 91 549 0 769 258 112 8 chr20 26067856 26068272 -46085610 + LTR16C LTR ERVL 3 489 -2 761 224 172 50 chr20 26068329 26068672 -46085210 - MLT1J1 LTR MaLR -24 422 38 21 36 0 0 chr20 26074830 26074858 -46079024 + AT_rich Low_complexity Low_complexity 1 28 0 198 174 0 0 chr20 26076965 26077011 -46076871 + (CA)n Simple_repeat Simple_repeat 2 47 0 209 216 0 20 chr20 26080507 26080558 -46073324 - MIR SINE MIR -139 69 20 184 222 0 44 chr20 26080694 26080739 -46073143 + MIR SINE MIR 63 105 -103 971 246 36 24 chr20 26080743 26081151 -46072731 - LTR16C LTR ERVL 0 491 45 1046 235 118 54 chr20 26081155 26081608 -46072274 + MLT1G1 LTR MaLR 9 436 -131 1938 140 86 0 chr20 26081608 26081922 -46071960 + MLT2C1 LTR ERVL 1 341 -56 237 65 0 0 chr20 26081956 26081987 -46071895 + (CA)n Simple_repeat Simple_repeat 2 32 0 264 157 39 0 chr20 26081993 26082044 -46071838 + MLT2C1 LTR ERVL 464 516 -4 861 176 88 0 chr20 26083077 26083236 -46070646 - FAM SINE Alu -2 173 1 231 263 61 10 chr20 26083304 26083403 -46070479 + L1MCc LINE L1 51 154 -6269 1711 171 119 44 chr20 26083559 26084014 -46069868 - L1M4 LINE L1 -1392 4754 4266 1058 269 71 48 chr20 26084517 26084597 -46069285 + LTR16C LTR ERVL 89 166 -325 1524 196 70 50 chr20 26084597 26084893 -46068989 - MLT1A1 LTR MaLR 0 365 59 2432 109 0 0 chr20 26084893 26085205 -46068677 + AluSx SINE Alu 1 312 0 1524 196 70 50 chr20 26085205 26085266 -46068616 - MLT1A1 LTR MaLR -306 59 1 1058 269 71 48 chr20 26085266 26085579 -46068303 + LTR16C LTR ERVL 166 491 0 299 259 49 12 chr20 26085580 26085661 -46068221 - MIR SINE MIR -104 104 21 342 308 56 46 chr20 26086218 26086413 -46067469 + L1MC4a LINE L1 5729 5925 -1883 22 35 0 0 chr20 26086616 26086645 -46067237 + AT_rich Low_complexity Low_complexity 1 29 0 208 256 0 0 chr20 26087488 26087531 -46066351 + A-rich Low_complexity Low_complexity 3 45 0 199 277 193 0 chr20 26087743 26087826 -46066056 + MIR SINE MIR 95 193 -69 785 230 16 78 chr20 26087912 26088169 -46065713 - MLT1F LTR MaLR 0 542 302 412 154 44 22 chr20 26088174 26088253 -46065629 - MLT1F LTR MaLR -440 102 22 2403 125 34 16 chr20 26088253 26088363 -46065519 + MLT1B LTR MaLR 1 108 -282 2213 176 56 7 chr20 26088363 26088771 -46065111 - MSTA LTR MaLR 0 428 1 2403 125 34 16 chr20 26088771 26089043 -46064839 + MLT1B LTR MaLR 108 390 0 1506 161 64 0 chr20 26089107 26089387 -46064495 + L1MB7 LINE L1 5887 6184 0 420 324 7 0 chr20 26089753 26089901 -46063981 + MIR SINE MIR 3 151 -111 651 288 31 18 chr20 26090096 26090322 -46063560 - MIR SINE MIR -14 248 20 606 256 0 0 chr20 26090706 26090862 -46063020 - MIR SINE MIR -34 228 73 1984 131 16 3 chr20 26091694 26092000 -46061882 - AluSx SINE Alu -2 310 1 1115 132 7 0 chr20 26092128 26092280 -46061602 + FRAM SINE Alu 1 150 -26 21 0 0 0 chr20 26092282 26092303 -46061579 + AT_rich Low_complexity Low_complexity 1 21 0 1191 116 5 183 chr20 26092347 26092387 -46061495 - MLT2D LTR ERVL 0 414 369 213 39 0 0 chr20 26092387 26092413 -46061469 + (CA)n Simple_repeat Simple_repeat 2 27 0 1191 116 5 183 chr20 26092413 26092438 -46061444 - MLT2D LTR ERVL -45 369 341 1257 61 0 0 chr20 26092438 26092618 -46061264 + (TA)n Simple_repeat Simple_repeat 1 180 0 1191 116 5 183 chr20 26092618 26092895 -46060987 - MLT2D LTR ERVL -73 341 1 1280 124 158 101 chr20 26092927 26093282 -46060600 - THE1C LTR MaLR 0 375 1 683 164 30 85 chr20 26093397 26093478 -46060404 - MER3 DNA MER1_type 0 209 140 2168 131 0 3 chr20 26093478 26093783 -46060099 + AluSx SINE Alu 1 304 -8 683 164 30 85 chr20 26093783 26093866 -46060016 - MER3 DNA MER1_type -69 140 54 2679 179 11 2 chr20 26093913 26094376 -46059506 + MLT1C LTR MaLR 1 467 0 2418 88 3 0 chr20 26094462 26094758 -46059124 + AluSp SINE Alu 1 297 -16 1295 181 69 72 chr20 26094762 26095082 -46058800 + MER21A LTR ERV1 260 578 -353 234 163 0 0 chr20 26095184 26095227 -46058655 + MER116 DNA Mariner 38 80 0 324 266 88 9 chr20 26095334 26095447 -46058435 + MIR3 SINE MIR 78 199 -9 867 270 47 92 chr20 26096109 26096554 -46057328 + MER115 DNA AcHobo 1 425 -268 784 216 28 6 chr20 26096587 26096763 -46057119 + MER115 DNA AcHobo 511 690 -3 2187 104 0 58 chr20 26096921 26097247 -46056635 + AluSx SINE Alu 1 307 -5 334 269 172 11 chr20 26097361 26097547 -46056335 - MIR SINE MIR -24 238 23 243 242 13 70 chr20 26097988 26098145 -46055737 + (CCCCG)n Simple_repeat Simple_repeat 2 149 0 375 232 141 0 chr20 26099894 26099993 -46053889 + MIR3 SINE MIR 45 157 -51 195 42 0 0 chr20 26100152 26100176 -46053706 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2149 102 0 0 chr20 26100182 26100457 -46053425 - AluSx SINE Alu -37 275 1 257 340 103 0 chr20 26101274 26101468 -46052414 + L3b LINE CR1 1102 1315 -268 2147 131 10 0 chr20 26101597 26101888 -46051994 + AluSx SINE Alu 1 294 -18 1281 259 87 64 chr20 26101910 26102486 -46051396 - L1MC4 LINE L1 -6 8036 7448 532 243 30 24 chr20 26103744 26103913 -46049969 + L2 LINE L2 3139 3308 -5 2035 132 3 28 chr20 26104406 26104725 -46049157 - AluSx SINE Alu -1 311 1 23 33 0 0 chr20 26105133 26105163 -46048719 + AT_rich Low_complexity Low_complexity 1 30 0 304 324 150 0 chr20 26106472 26106645 -46047237 + MIR SINE MIR 29 227 -35 251 262 16 162 chr20 26106691 26106805 -46047077 + L2 LINE L2 2915 2992 -280 2233 128 0 0 chr20 26106805 26107111 -46046771 - AluSx SINE Alu -6 306 1 251 262 16 162 chr20 26107111 26107187 -46046695 + L2 LINE L2 2992 3077 -195 23 0 0 0 chr20 26107987 26108010 -46045872 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr20 26108072 26108114 -46045768 + AT_rich Low_complexity Low_complexity 1 42 0 768 200 0 0 chr20 26108744 26108864 -46045018 - FLAM_A SINE Alu -10 132 13 274 175 123 0 chr20 26108879 26108936 -46044946 - AluSg/x SINE Alu -121 181 118 182 268 36 0 chr20 26109146 26109202 -46044680 + L2 LINE L2 3215 3272 0 698 271 91 84 chr20 26109656 26109934 -46043948 - L1MC4 LINE L1 -1 8041 7766 1631 182 21 4 chr20 26109934 26110214 -46043668 - AluJo SINE Alu -25 287 3 698 271 91 84 chr20 26110214 26110522 -46043360 - L1MC4 LINE L1 -276 7766 7331 877 171 28 34 chr20 26110524 26110700 -46043182 + MER3 DNA MER1_type 2 129 -80 1722 250 35 70 chr20 26110702 26111095 -46042787 - L1MC4 LINE L1 -592 7450 7092 832 131 0 25 chr20 26111095 26111217 -46042665 - 5S rRNA rRNA 0 121 3 1722 250 35 70 chr20 26111217 26111542 -46042340 - L1MC4 LINE L1 -950 7092 6757 1525 160 0 91 chr20 26112843 26113161 -46040721 + AluJo SINE Alu 3 291 -21 21 36 0 0 chr20 26113161 26113189 -46040693 + AT_rich Low_complexity Low_complexity 1 28 0 580 257 109 6 chr20 26113340 26113523 -46040359 - LTR16C LTR ERVL 0 491 290 234 0 0 0 chr20 26113943 26113969 -46039913 + (CA)n Simple_repeat Simple_repeat 2 27 0 240 100 0 0 chr20 26113969 26114009 -46039873 + (TC)n Simple_repeat Simple_repeat 1 40 0 210 312 28 9 chr20 26114032 26114141 -46039741 + CT-rich Low_complexity Low_complexity 5 115 0 189 178 0 0 chr20 26114224 26114269 -46039613 + (CA)n Simple_repeat Simple_repeat 1 45 0 270 319 216 0 chr20 26114428 26114544 -46039338 + L2 LINE L2 3116 3256 -16 1137 164 10 10 chr20 26114740 26114962 -46038920 + AluJb SINE Alu 88 309 0 197 326 32 0 chr20 26115343 26115438 -46038444 + MIR3 SINE MIR 110 207 -1 216 158 0 0 chr20 26117410 26117448 -46036434 + (TA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr20 26118965 26118986 -46034896 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr20 26120106 26120140 -46033742 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr20 26120720 26120748 -46033134 + AT_rich Low_complexity Low_complexity 1 28 0 808 291 86 0 chr20 26121116 26121350 -46032532 - MIR SINE MIR 0 262 9 936 259 23 8 chr20 26122002 26122264 -46031618 - LTR16C LTR ERVL 0 491 226 473 244 30 67 chr20 26123159 26123323 -46030559 - MIR SINE MIR -37 225 68 251 346 23 15 chr20 26123936 26124066 -46029816 + L1P4 LINE L1 5617 5747 -419 24 53 0 0 chr20 26124414 26124452 -46029430 + AT_rich Low_complexity Low_complexity 1 38 0 230 263 259 6 chr20 26125170 26125278 -46028604 + MIR SINE MIR 34 156 -85 1834 158 60 25 chr20 26125735 26126103 -46027779 - MLT1B LTR MaLR 0 390 10 22 35 0 0 chr20 26126123 26126152 -46027730 + AT_rich Low_complexity Low_complexity 1 29 0 3435 152 18 41 chr20 26127198 26127863 -46026019 + L1MB7 LINE L1 5534 6183 -1 482 297 56 30 chr20 26127939 26128205 -46025677 - L1ME LINE L1 -359 5762 5490 1286 173 4 24 chr20 26128215 26128470 -46025412 - L1MD3 LINE L1 0 7995 7746 26 30 0 0 chr20 26128472 26128505 -46025377 + AT_rich Low_complexity Low_complexity 1 33 0 1204 130 62 19 chr20 26128542 26128750 -46025132 + Tigger3(Golem) DNA MER2_type 62 278 -2751 1024 198 5 109 chr20 26128754 26129122 -46024760 + L1MC4 LINE L1 7711 8040 -2 791 172 31 0 chr20 26129122 26129250 -46024632 + FLAM_A SINE Alu 1 132 -1 829 245 10 0 chr20 26130503 26130703 -46023179 + L1MC/D LINE L1 5615 5816 -1992 1075 156 7 0 chr20 26130947 26131101 -46022781 - FRAM SINE Alu -11 155 1 1313 162 34 49 chr20 26131142 26131431 -46022451 - AluSq SINE Alu 0 313 29 2701 172 36 62 chr20 26131524 26132170 -46021712 - L1MB7 LINE L1 -74 6110 5482 2191 176 19 27 chr20 26132170 26132580 -46021302 - MER54A LTR ERVL 0 901 495 1171 171 27 2 chr20 26132780 26132806 -46021076 - L1MB7 LINE L1 -710 5468 5444 1942 192 31 17 chr20 26132806 26133166 -46020716 + MLT1A1 LTR MaLR 1 365 0 1171 171 27 2 chr20 26133166 26133461 -46020421 - L1MB7 LINE L1 -734 5444 5167 2107 106 42 0 chr20 26133493 26133776 -46020106 - AluSq SINE Alu -18 295 1 287 130 19 0 chr20 26135454 26135508 -46018374 + CT-rich Low_complexity Low_complexity 2 56 0 229 279 0 58 chr20 26136070 26136156 -46017726 - MIR3 SINE MIR -21 187 107 1126 176 88 0 chr20 26137739 26137978 -46015904 + MLT1E1 LTR MaLR 1 260 -394 723 186 32 0 chr20 26137982 26138106 -46015776 - AluSq SINE Alu -52 261 134 1390 104 0 0 chr20 26138106 26138289 -46015593 - AluSp SINE Alu -9 304 122 334 147 0 0 chr20 26138765 26138833 -46015049 - AluSp SINE Alu -167 136 69 1336 158 0 0 chr20 26138833 26139036 -46014846 - AluSx SINE Alu -109 203 1 1822 199 84 3 chr20 26139037 26139383 -46014499 + MLT1E1 LTR MaLR 281 654 0 2098 122 27 0 chr20 26139703 26139997 -46013885 - AluSq SINE Alu -11 302 1 259 157 0 20 chr20 26140015 26140066 -46013816 - L1MC2 LINE L1 -253 6091 6042 3791 31 2 0 chr20 26140066 26140491 -46013391 - L1PA4 LINE L1 -2 6153 5728 8309 25 7 0 chr20 26140506 26141826 -46012056 + L1PA4 LINE L1 4421 5745 -410 4119 145 36 54 chr20 26141826 26142291 -46011591 - L1MC2 LINE L1 -292 6052 5614 3496 90 2 62 chr20 26142291 26142535 -46011347 - L1MA2 LINE L1 0 6304 6108 2562 54 0 0 chr20 26142535 26142831 -46011051 - AluY SINE Alu -15 296 1 3496 90 2 62 chr20 26142831 26143121 -46010761 - L1MA2 LINE L1 -196 6108 5802 4119 145 36 54 chr20 26143121 26143576 -46010306 - L1MC2 LINE L1 -730 5614 5152 1885 154 3 3 chr20 26143590 26143888 -46009994 - AluJb SINE Alu -14 298 1 1827 266 7 14 chr20 26143892 26144317 -46009565 + MLT1H1 LTR MaLR 132 553 -2 244 275 65 72 chr20 26144325 26144466 -46009416 - L2 LINE L2 -3 3269 3129 1802 146 31 11 chr20 26144466 26144753 -46009129 + AluJb SINE Alu 1 293 -19 244 275 65 72 chr20 26144753 26144897 -46008985 - L2 LINE L2 -143 3129 2985 2293 257 125 18 chr20 26145005 26145439 -46008443 - L2 LINE L2 -303 3010 2624 2365 110 0 0 chr20 26145439 26145747 -46008135 + AluSx SINE Alu 1 308 -4 2293 257 125 18 chr20 26145747 26146227 -46007655 - L2 LINE L2 -689 2624 1997 318 283 131 0 chr20 26146229 26146328 -46007554 - MIR SINE MIR -140 122 11 498 178 204 32 chr20 26146341 26146498 -46007384 - MIR SINE MIR 0 262 79 2778 137 29 80 chr20 26147683 26147871 -46006011 + L1MCb LINE L1 565 761 -5350 1838 152 0 20 chr20 26147871 26148167 -46005715 + AluSx SINE Alu 1 290 -22 2042 138 0 0 chr20 26148171 26148454 -46005428 + AluSx SINE Alu 1 283 -29 231 36 0 0 chr20 26148454 26148482 -46005400 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 2778 137 29 80 chr20 26148482 26149012 -46004870 + L1MCb LINE L1 762 1259 -4852 13641 175 34 17 chr20 26149013 26152333 -46001549 - L1MB1 LINE L1 -274 5894 2509 1242 195 93 30 chr20 26152880 26153182 -46000700 + MLT1G LTR MaLR 270 590 0 2095 132 0 0 chr20 26153606 26153902 -45999980 - AluSx SINE Alu -16 296 1 530 277 19 34 chr20 26153967 26154173 -45999709 - MLT1L LTR MaLR -8 607 405 1080 181 29 19 chr20 26154204 26154414 -45999468 + MLT1A2 LTR MaLR 1 212 -162 426 235 92 10 chr20 26154527 26154625 -45999257 - MLT1L LTR MaLR -365 250 145 2090 128 0 13 chr20 26154657 26154963 -45998919 + AluSx SINE Alu 1 302 -10 275 300 36 36 chr20 26155086 26155226 -45998656 - MLT1L LTR MaLR -458 157 18 241 208 0 0 chr20 26155362 26155410 -45998472 + L1ME4a LINE L1 6074 6121 0 702 137 8 23 chr20 26155427 26155558 -45998324 + L1MB8 LINE L1 6050 6178 0 2292 89 3 10 chr20 26156290 26156593 -45997289 - AluSq SINE Alu -12 301 1 1665 182 11 7 chr20 26156916 26157202 -45996680 + AluJo SINE Alu 12 298 -14 228 111 0 0 chr20 26157206 26157242 -45996640 + (TG)n Simple_repeat Simple_repeat 1 36 0 2269 109 0 3 chr20 26157551 26157854 -45996028 - AluSx SINE Alu -10 302 1 1133 142 0 0 chr20 26157858 26158020 -45995862 - AluJb SINE Alu -15 297 136 924 196 91 18 chr20 26159117 26159336 -45994546 + MER46A DNA MER2_type 1 235 -1 3296 177 45 11 chr20 26160081 26160726 -45993156 + MER39 LTR ERV1 2 707 0 2250 68 0 31 chr20 26160820 26161151 -45992731 - AluY SINE Alu 0 322 1 845 145 0 0 chr20 26161153 26161277 -45992605 - FLAM_C SINE Alu -9 134 11 197 319 101 0 chr20 26163302 26163371 -45990511 - L2 LINE L2 -1 3271 3196 198 0 0 0 chr20 26164423 26164445 -45989437 + (T)n Simple_repeat Simple_repeat 1 22 0 746 183 0 0 chr20 26164461 26164592 -45989290 - FLAM_A SINE Alu -2 131 1 1234 249 107 53 chr20 26164740 26165302 -45988580 - LTR29 LTR ERV1 -28 594 3 5007 34 0 0 chr20 26165600 26166159 -45987723 + L1PA4 LINE L1 5594 6152 -3 918 117 0 58 chr20 26166852 26166989 -45986893 + FLAM_C SINE Alu 2 130 -3 489 190 116 0 chr20 26167456 26167577 -45986305 + MER97b DNA MER1_type? 42 176 -877 558 248 15 79 chr20 26167754 26167956 -45985926 + Charlie8 DNA MER1_type 3 191 -2226 2345 71 0 0 chr20 26170199 26170504 -45983378 - AluY SINE Alu 0 305 1 1949 144 3 7 chr20 26171964 26172262 -45981620 - AluSx SINE Alu -15 297 1 3265 127 73 30 chr20 26172410 26172915 -45980967 - MER1A DNA MER1_type 0 527 1 1919 136 14 10 chr20 26173044 26173339 -45980543 + AluJb SINE Alu 5 300 -12 261 215 105 76 chr20 26174792 26174964 -45978918 - L1MC4 LINE L1 -1 8041 7865 2006 212 97 112 chr20 26175007 26175925 -45977957 - L1MC5 LINE L1 -89 7872 6973 2085 144 37 64 chr20 26175925 26176248 -45977634 - L1MB2 LINE L1 0 6171 5862 2572 7 0 0 chr20 26176248 26176524 -45977358 - AluYa5 SINE Alu -2 309 34 2085 144 37 64 chr20 26176524 26176637 -45977245 - L1MB2 LINE L1 -309 5862 5747 2006 212 97 112 chr20 26176637 26176884 -45976998 - L1MC5 LINE L1 -988 6973 6724 257 258 15 0 chr20 26177073 26177139 -45976743 + MER5B DNA MER1_type 1 67 -111 764 167 0 0 chr20 26177140 26177254 -45976628 + AluJb SINE Alu 3 116 -196 22 35 0 0 chr20 26177269 26177298 -45976584 + AT_rich Low_complexity Low_complexity 1 29 0 457 274 16 0 chr20 26177306 26177430 -45976452 + MER5B DNA MER1_type 47 172 -6 29 0 0 0 chr20 26177788 26177817 -45976065 + AT_rich Low_complexity Low_complexity 1 29 0 2186 92 35 0 chr20 26177822 26178104 -45975778 + AluSc SINE Alu 1 292 -17 187 283 101 101 chr20 26178620 26178867 -45975015 - L2 LINE L2 -354 2960 2714 411 314 39 0 chr20 26179568 26179724 -45974158 + CT-rich Low_complexity Low_complexity 6 167 0 2022 116 0 35 chr20 26179845 26180156 -45973726 - AluSx SINE Alu -12 300 1 2496 54 3 0 chr20 26180563 26180857 -45973025 + AluY SINE Alu 1 295 -16 659 298 76 48 chr20 26182097 26182206 -45971676 - L1ME4a LINE L1 -59 6062 5957 1815 124 0 0 chr20 26182206 26182448 -45971434 + AluSx SINE Alu 40 281 -31 659 298 76 48 chr20 26182448 26183195 -45970687 - L1ME4a LINE L1 -164 5957 5177 2121 112 0 0 chr20 26183953 26184238 -45969644 + AluSx SINE Alu 6 290 -22 1835 147 103 26 chr20 26184442 26184782 -45969100 + MER47A DNA MER2_type 1 366 0 201 308 0 19 chr20 26185842 26185894 -45967988 + MIR SINE MIR 20 70 -138 203 261 252 17 chr20 26189776 26189895 -45963987 + MIR SINE MIR 99 245 -17 228 196 252 37 chr20 26191212 26191319 -45962563 + L3 LINE CR1 1147 1276 -301 1920 151 0 20 chr20 26191455 26191759 -45962123 - AluJb SINE Alu -14 298 1 222 229 34 17 chr20 26192195 26192313 -45961569 + (TA)n Simple_repeat Simple_repeat 1 120 0 27 29 0 0 chr20 26192319 26192353 -45961529 + AT_rich Low_complexity Low_complexity 1 34 0 334 347 123 18 chr20 26192418 26192599 -45961283 - MIR SINE MIR -63 145 3 1754 143 14 0 chr20 26192602 26192921 -45960961 - AluSx SINE Alu 0 323 1 310 193 105 0 chr20 26193428 26193485 -45960397 + L2 LINE L2 3250 3312 -1 439 285 20 6 chr20 26194413 26194563 -45959319 + MER5B DNA MER1_type 28 184 -5 1196 178 51 88 chr20 26194688 26195086 -45958796 - MLT1B LTR MaLR 0 390 8 2289 103 0 26 chr20 26195807 26196119 -45957763 - AluSx SINE Alu -8 304 1 1961 107 54 3 chr20 26196122 26196420 -45957462 - AluSp SINE Alu 0 313 1 261 376 78 0 chr20 26198070 26198211 -45955671 - L3b LINE CR1 -156 1427 1276 510 237 5 108 chr20 26198274 26198468 -45955414 + MER102a DNA MER1_type 142 315 -15 300 209 284 22 chr20 26199900 26200034 -45953848 + MER112 DNA MER1_type 57 225 -35 24 32 0 0 chr20 26200090 26200121 -45953761 + AT_rich Low_complexity Low_complexity 1 31 0 1926 140 11 4 chr20 26201695 26202015 -45951867 - AluJb SINE Alu 0 324 3 1691 193 24 0 chr20 26202336 26202626 -45951256 + AluJo SINE Alu 3 299 -13 231 325 108 8 chr20 26202981 26203101 -45950781 - MIR3 SINE MIR -8 200 69 2084 113 31 0 chr20 26203192 26203485 -45950397 + AluSx SINE Alu 1 302 -10 189 0 0 0 chr20 26206915 26206936 -45946946 + (A)n Simple_repeat Simple_repeat 1 21 0 2086 122 7 16 chr20 26208854 26209157 -45944725 + AluSx SINE Alu 1 300 -12 2250 125 0 0 chr20 26209161 26209464 -45944418 + AluSx SINE Alu 1 303 -9 206 274 16 32 chr20 26209766 26209828 -45944054 + L2 LINE L2 2959 3019 -253 1897 146 7 3 chr20 26209973 26210269 -45943613 - AluJb SINE Alu -22 290 2 22 0 0 0 chr20 26210360 26210382 -45943500 + AT_rich Low_complexity Low_complexity 1 22 0 300 138 0 0 chr20 26210494 26210559 -45943323 + (TG)n Simple_repeat Simple_repeat 1 65 0 296 333 9 0 chr20 26210845 26210953 -45942929 + L2 LINE L2 3123 3231 -41 329 256 13 0 chr20 26211287 26211365 -45942517 - MIR SINE MIR -109 153 75 230 263 84 21 chr20 26211553 26211648 -45942234 + MIR3 SINE MIR 65 165 -43 22 35 0 0 chr20 26212242 26212271 -45941611 + AT_rich Low_complexity Low_complexity 1 29 0 2134 102 32 0 chr20 26212274 26212557 -45941325 - AluSx SINE Alu -20 292 1 1715 194 25 0 chr20 26212812 26213127 -45940755 + MER58B DNA MER1_type 19 341 0 235 297 102 34 chr20 26214178 26214296 -45939586 - L2 LINE L2 -5 3267 3142 479 318 24 35 chr20 26214423 26214678 -45939204 - L2 LINE L2 -512 2802 2551 329 296 10 0 chr20 26217060 26217158 -45936724 + L2 LINE L2 2924 3022 -250 423 330 48 5 chr20 26217480 26217686 -45936196 + MIR SINE MIR 14 228 -34 1150 236 75 25 chr20 26217823 26218183 -45935699 + LTR16C LTR ERVL 85 462 -29 4115 160 83 94 chr20 26218924 26219046 -45934836 + L1MB8 LINE L1 4585 4707 -1471 2161 89 0 0 chr20 26219046 26219316 -45934566 + AluSx SINE Alu 39 308 -4 4115 160 83 94 chr20 26219316 26219689 -45934193 + L1MB8 LINE L1 4707 5083 -1095 2028 119 0 0 chr20 26219689 26219950 -45933932 + AluSq SINE Alu 1 261 -52 623 158 0 0 chr20 26219950 26220045 -45933837 + AluSp/q SINE Alu 202 296 -17 4115 160 83 94 chr20 26220045 26220146 -45933736 + L1MB8 LINE L1 5082 5183 -995 2159 115 10 3 chr20 26220146 26220441 -45933441 + AluSx SINE Alu 1 297 -15 4115 160 83 94 chr20 26220441 26221336 -45932546 + L1MB8 LINE L1 5183 6164 -14 181 73 24 24 chr20 26222073 26222114 -45931768 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 553 255 77 20 chr20 26222534 26222730 -45931152 + MLT1I LTR MaLR 85 291 -118 2141 99 41 0 chr20 26222831 26223123 -45930759 - AluSx SINE Alu -8 304 1 352 142 0 151 chr20 26223584 26223690 -45930192 + MLT1F1 LTR MaLR 49 138 -429 2367 182 65 17 chr20 26223690 26224236 -45929646 + L1MD3 LINE L1 6136 6334 -10 403 258 153 11 chr20 26224475 26224665 -45929217 - MER113 DNA MER1_type? -137 384 168 800 217 22 5 chr20 26224665 26224849 -45929033 + AluJb SINE Alu 120 306 -6 264 208 52 10 chr20 26224852 26224948 -45928934 - MER113 DNA MER1_type? -361 160 61 195 42 0 0 chr20 26225346 26225370 -45928512 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9054 20 0 1 chr20 26225373 26227162 -45926720 - L1PA7 LINE L1 -13 6141 4351 4029 18 2 0 chr20 26227162 26227616 -45926266 + L1PA7 LINE L1 3895 4349 -1797 1237 49 0 0 chr20 26227645 26227788 -45926094 + AluSg/x SINE Alu 160 302 -10 825 329 63 2 chr20 26227798 26228369 -45925513 + L1M4 LINE L1 4563 5168 -978 1552 179 19 0 chr20 26228370 26228632 -45925250 + AluJb SINE Alu 1 267 -45 647 198 6 22 chr20 26228635 26228817 -45925065 + GA-rich Low_complexity Low_complexity 2 180 0 285 271 37 28 chr20 26228828 26228935 -45924947 + L1M4 LINE L1 5170 5277 -869 2421 80 7 0 chr20 26228947 26229246 -45924636 + AluY SINE Alu 1 301 -10 1065 169 91 85 chr20 26229573 26229796 -45924086 + MER33 DNA MER1_type 4 231 -2354 2365 104 7 0 chr20 26229796 26230105 -45923777 - AluSp SINE Alu -2 311 1 1065 169 91 85 chr20 26230105 26230200 -45923682 + MER33 DNA MER1_type 231 324 0 1500 189 0 54 chr20 26230589 26230921 -45922961 + AluJb SINE Alu 1 316 0 354 204 282 0 chr20 26231545 26231648 -45922234 + HsTC2 DNA Tc2 1 132 -1766 * 834 246 37 25 chr20 26231644 26231888 -45921994 + HsTC2 DNA Tc2 1292 1714 -184 5210 135 20 29 chr20 26231903 26232119 -45921763 - L1MB3 LINE L1 -1 6182 5966 2178 123 0 22 chr20 26232119 26232435 -45921447 - AluSx SINE Alu -3 309 1 5210 135 20 29 chr20 26232435 26232939 -45920943 - L1MB3 LINE L1 -217 5966 5469 2472 115 22 0 chr20 26232939 26233295 -45920587 - THE1B LTR MaLR 0 364 1 5210 135 20 29 chr20 26233295 26233470 -45920412 - L1MB3 LINE L1 -714 5469 5294 589 208 22 77 chr20 26233483 26233635 -45920247 + HsTC2 DNA Tc2 1720 1863 -35 2137 130 0 0 chr20 26233635 26233968 -45919914 - AluSx SINE Alu 0 333 1 589 208 22 77 chr20 26233968 26233997 -45919885 + HsTC2 DNA Tc2 1863 1892 -6 25 0 0 0 chr20 26234047 26234072 -45919810 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr20 26234104 26234134 -45919748 + AT_rich Low_complexity Low_complexity 1 30 0 2262 115 20 0 chr20 26234442 26234782 -45919100 - AluSx SINE Alu 0 346 1 466 222 34 17 chr20 26234948 26235065 -45918817 - LTR67 LTR ERVL -7 550 432 275 311 11 11 chr20 26235262 26235352 -45918530 - LTR67 LTR ERVL -355 202 113 1512 170 119 0 chr20 26235510 26235787 -45918095 + AluJb SINE Alu 1 310 -2 548 153 8 23 chr20 26235791 26235922 -45917960 + GA-rich Low_complexity Low_complexity 3 131 0 496 104 39 0 chr20 26236298 26236375 -45917507 - MADE1 DNA Mariner 0 80 1 410 208 109 3 chr20 26236547 26236655 -45917227 - L1ME2 LINE L1 -4 6330 6052 305 264 11 0 chr20 26236690 26236781 -45917101 + LTR30 LTR ERV1 552 643 -79 833 239 95 8 chr20 26236993 26237234 -45916648 - MLT1H1 LTR MaLR -298 257 32 428 196 106 2 chr20 26237511 26237619 -45916263 + L1ME2 LINE L1 6052 6330 -4 283 256 24 49 chr20 26239267 26239349 -45914533 - LTR67 LTR ERVL -364 193 114 230 97 0 0 chr20 26239324 26239355 -45914527 - MLT1J LTR MaLR -377 134 104 * 274 283 43 58 chr20 26241063 26241201 -45912681 - L2 LINE L2 0 3272 3137 384 237 138 101 chr20 26241212 26241646 -45912236 - MLT1J2 LTR MaLR 0 450 1 29 60 0 0 chr20 26242376 26242426 -45911456 + AT_rich Low_complexity Low_complexity 1 50 0 2439 146 30 0 chr20 26242426 26243537 -45910345 - L1PA15 LINE L1 -53 6112 4883 485 235 143 43 chr20 26243805 26244209 -45909673 + MLT1G LTR MaLR 68 594 -1 1787 177 3 0 chr20 26244585 26244867 -45909015 + AluJb SINE Alu 1 283 -29 793 211 32 11 chr20 26247022 26247207 -45906675 - MER5A DNA MER1_type 0 189 1 2586 55 0 13 chr20 26247489 26247799 -45906083 + AluY SINE Alu 1 306 -5 1826 138 71 0 chr20 26247805 26248088 -45905794 + AluSx SINE Alu 1 303 -9 2133 134 0 25 chr20 26248396 26248716 -45905166 + AluSx SINE Alu 1 312 0 1091 189 21 75 chr20 26248899 26249099 -45904783 + L1MC4 LINE L1 6814 6996 -1046 1871 122 26 45 chr20 26249099 26249410 -45904472 + AluJo SINE Alu 1 305 -7 1091 189 21 75 chr20 26249410 26249489 -45904393 + L1MC4 LINE L1 6996 7078 -964 336 48 0 0 chr20 26249496 26249538 -45904344 + (TG)n Simple_repeat Simple_repeat 1 42 0 223 238 41 34 chr20 26249548 26249695 -45904187 + (CATATA)n Simple_repeat Simple_repeat 6 153 0 * 289 223 12 60 chr20 26249628 26249794 -45904088 + (TATAA)n Simple_repeat Simple_repeat 3 160 0 260 207 83 24 chr20 26249706 26249875 -45904007 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 * 275 65 87 0 chr20 26249880 26249926 -45903956 - L1MC4 LINE L1 -898 7144 7095 2114 124 0 0 chr20 26249926 26250239 -45903643 + AluSx SINE Alu 1 313 0 297 122 0 0 chr20 26250260 26250309 -45903573 + L1MC4 LINE L1 7128 7176 -866 2285 125 0 3 chr20 26250309 26250760 -45903122 + AluSx SINE Alu 1 450 0 3066 231 49 26 chr20 26250760 26251458 -45902424 + L1MC4 LINE L1 7141 7808 -187 2334 135 32 56 chr20 26251458 26251508 -45902374 - MSTB1 LTR MaLR 0 432 382 1626 170 38 35 chr20 26251508 26251797 -45902085 - AluSx SINE Alu -22 290 1 2334 135 32 56 chr20 26251797 26252189 -45901693 - MSTB1 LTR MaLR -50 382 1 3066 231 49 26 chr20 26252189 26252380 -45901502 + L1MC4 LINE L1 7808 7993 -2 1894 133 3 71 chr20 26253889 26254059 -45899823 - AluJo SINE Alu -10 302 122 10577 52 6 0 chr20 26254059 26256127 -45897755 - L1PA5 LINE L1 -4 6150 4077 1894 133 3 71 chr20 26256127 26256141 -45897741 - AluJo SINE Alu -190 122 109 1924 106 6 90 chr20 26256141 26256489 -45897393 - AluSx SINE Alu 0 322 1 1894 133 3 71 chr20 26256489 26256626 -45897256 - AluJo SINE Alu -203 109 1 398 196 65 0 chr20 26256628 26256735 -45897147 + L2 LINE L2 1988 2101 -1213 1790 95 4 0 chr20 26256737 26256969 -45896913 - AluSp SINE Alu -16 297 65 378 263 1 37 chr20 26257150 26257262 -45896620 + MIR SINE MIR 49 156 -64 2189 69 44 0 chr20 26257267 26257541 -45896341 - AluSc SINE Alu -23 286 1 1331 285 108 0 chr20 26257542 26258033 -45895849 + L2 LINE L2 2093 2636 -678 1127 275 138 24 chr20 26258033 26258495 -45895387 - MLT1G1 LTR MaLR 0 595 81 1666 186 0 28 chr20 26258598 26258916 -45894966 + AluJo SINE Alu 1 309 -3 316 352 51 19 chr20 26258978 26259194 -45894688 + L2 LINE L2 2830 3052 -261 613 204 34 27 chr20 26259195 26259342 -45894540 + L1ME2 LINE L1 5932 6079 -85 812 242 114 29 chr20 26259345 26259671 -45894211 - MLT1G LTR MaLR -2 588 163 279 0 0 0 chr20 26259718 26259749 -45894133 + (GA)n Simple_repeat Simple_repeat 1 31 0 332 263 70 59 chr20 26259768 26259875 -45894007 - MLT1G LTR MaLR -379 188 77 2126 128 3 7 chr20 26259875 26260181 -45893701 + AluSx SINE Alu 1 305 -7 332 263 70 59 chr20 26260181 26260259 -45893623 - MLT1G LTR MaLR -490 77 1 269 253 48 0 chr20 26260259 26260342 -45893540 + L1ME2 LINE L1 6077 6163 -1 1975 154 0 0 chr20 26260353 26260665 -45893217 + AluSx SINE Alu 1 312 0 1415 164 16 35 chr20 26260667 26260923 -45892959 + AluJo SINE Alu 1 251 -61 319 237 71 150 chr20 26260925 26261178 -45892704 + L2 LINE L2 3081 3313 0 303 277 24 90 chr20 26261330 26261496 -45892386 - MIR3 SINE MIR -23 185 31 252 220 153 0 chr20 26262712 26262771 -45891111 + L2 LINE L2 3201 3268 -4 2238 109 20 0 chr20 26262827 26263130 -45890752 + AluSx SINE Alu 3 311 -1 1205 49 0 0 chr20 26263595 26263739 -45890143 - L1PA4 LINE L1 -3 6152 6009 821 43 0 0 chr20 26263739 26263833 -45890049 - AluY SINE Alu -13 298 205 4352 130 66 82 chr20 26263833 26264838 -45889044 + pTR5 LTR ERV1 743 2020 -418 304 257 46 18 chr20 26264841 26264950 -45888932 + LTR30 LTR ERV1 544 655 -67 1439 95 5 5 chr20 26264952 26265162 -45888720 + pTR5 LTR ERV1 181 390 -2048 1698 77 0 0 chr20 26265164 26265371 -45888511 - AluY SINE Alu -103 208 2 2138 225 62 40 chr20 26265446 26266047 -45887835 + L1ME1 LINE L1 5548 6161 -5 180 77 0 0 chr20 26266261 26266287 -45887595 + (GA)n Simple_repeat Simple_repeat 2 27 0 342 207 37 12 chr20 26267610 26267692 -45886190 - MER103 DNA DNA -81 85 2 1971 125 47 10 chr20 26267794 26268090 -45885792 - AluJb SINE Alu -5 307 1 2385 180 78 10 chr20 26268449 26268939 -45884943 - Charlie1b DNA MER1_type 0 523 1 557 241 108 31 chr20 26269415 26269610 -45884272 + MLT1J1 LTR MaLR 1 210 -236 265 228 0 18 chr20 26269724 26269781 -45884101 + MLT1I LTR MaLR 345 400 -9 805 189 91 0 chr20 26270080 26270223 -45883659 + AluJb SINE Alu 142 297 -15 466 167 19 9 chr20 26270232 26270340 -45883542 + GA-rich Low_complexity Low_complexity 1 109 0 409 204 91 0 chr20 26270527 26270615 -45883267 - MIR SINE MIR -71 191 96 885 173 152 11 chr20 26270619 26270810 -45883072 - MLT2D LTR ERVL 0 414 197 649 91 11 0 chr20 26270811 26270899 -45882983 - ERVL-D LTR ERVL -2012 3752 3664 * 2712 219 42 7 chr20 26270882 26272049 -45881833 - ERVL-D LTR ERVL -4477 1287 1 1215 214 77 17 chr20 26272056 26272355 -45881527 - MLT2D LTR ERVL -7 407 91 1061 173 0 0 chr20 26272708 26272881 -45881001 - FRAM SINE Alu -3 173 1 2430 87 0 0 chr20 26273296 26273596 -45880286 + AluSc SINE Alu 1 300 -9 2177 109 13 0 chr20 26273789 26274091 -45879791 + AluSx SINE Alu 1 306 -6 409 287 127 6 chr20 26274635 26274792 -45879090 + MIR SINE MIR 79 254 -8 263 315 79 28 chr20 26277209 26277387 -45876495 - HAL1 LINE L1 -568 1939 1753 1853 146 17 3 chr20 26277401 26277695 -45876187 - AluSx SINE Alu -14 298 1 781 132 23 0 chr20 26277713 26277842 -45876040 - AluSq/x SINE Alu -179 133 2 2068 61 0 25 chr20 26277873 26278150 -45875732 - AluY SINE Alu 0 311 42 509 260 5 81 chr20 26278160 26278276 -45875606 - HAL1 LINE L1 -815 1692 1600 2306 90 7 0 chr20 26278276 26278576 -45875306 - AluSx SINE Alu -10 302 1 509 260 5 81 chr20 26278576 26278682 -45875200 - HAL1 LINE L1 -907 1600 1487 200 231 165 50 chr20 26278691 26278812 -45875070 - MIR SINE MIR -5 257 123 2283 78 7 0 chr20 26278869 26279153 -45874729 + AluSc SINE Alu 1 286 -23 369 274 3 36 chr20 26279158 26279270 -45874612 - MIR SINE MIR -64 144 49 251 295 72 43 chr20 26279308 26279515 -45874367 - HAL1 LINE L1 -1036 1471 1259 297 175 0 16 chr20 26279613 26279676 -45874206 - L1MA9 LINE L1 0 6312 6251 574 150 20 30 chr20 26279676 26279776 -45874106 - FRAM SINE Alu -14 162 64 2445 222 89 36 chr20 26279785 26280066 -45873816 - L1ME1 LINE L1 -68 6909 6644 2110 83 4 0 chr20 26280066 26280330 -45873552 - AluSx SINE Alu 0 312 48 2445 222 89 36 chr20 26280330 26281071 -45872811 - L1ME1 LINE L1 -333 6644 5833 2985 224 148 84 chr20 26281079 26281490 -45872392 - L1ME1 LINE L1 -2254 4703 4320 192 77 0 0 chr20 26281490 26281516 -45872366 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2985 224 148 84 chr20 26281516 26281573 -45872309 - L1ME1 LINE L1 -2637 4320 4268 1498 98 79 9 chr20 26281573 26281788 -45872094 - MER30 DNA MER1_type 0 230 1 2985 224 148 84 chr20 26281788 26282876 -45871006 - L1ME1 LINE L1 -2689 4268 3060 2318 73 0 22 chr20 26282876 26283192 -45870690 - AluY SINE Alu -2 309 1 2985 224 148 84 chr20 26283192 26283244 -45870638 - L1ME1 LINE L1 -3897 3060 3013 2962 147 108 13 chr20 26283234 26283791 -45870091 - L1MB4 LINE L1 -1 6179 5570 * 712 159 32 82 chr20 26283794 26283847 -45870035 - L1ME1 LINE L1 -4102 3036 2982 1822 145 3 26 chr20 26283847 26284150 -45869732 + AluSx SINE Alu 1 296 -16 712 159 32 82 chr20 26284150 26284256 -45869626 - L1ME1 LINE L1 -4156 2982 2888 1880 72 111 43 chr20 26284256 26284535 -45869347 - AluY SINE Alu -13 298 1 712 159 32 82 chr20 26284535 26284594 -45869288 - L1ME1 LINE L1 -4250 2888 2828 2099 114 27 3 chr20 26284744 26285041 -45868841 - AluSx SINE Alu -6 306 3 687 254 263 21 chr20 26285051 26285382 -45868500 - MER57B LTR ERV1 -23 411 1 1067 224 15 0 chr20 26285438 26285639 -45868243 + MER82 DNA MER2_type 449 652 -1 3023 178 30 20 chr20 26286050 26286652 -45867230 - L1MB8 LINE L1 -2 6245 5638 1381 159 14 0 chr20 26286652 26286866 -45867016 - AluJo SINE Alu -36 276 60 433 133 0 0 chr20 26286866 26286926 -45866956 - L1MB8 LINE L1 -623 5630 5571 2043 192 17 128 chr20 26286926 26287457 -45866425 - MER70A LTR ERVL 0 472 1 2665 158 49 80 chr20 26287457 26287643 -45866239 - L1MB8 LINE L1 -668 5575 5385 1828 155 0 17 chr20 26287643 26287939 -45865943 - AluSq SINE Alu -22 291 1 2665 158 49 80 chr20 26287939 26288114 -45865768 - L1MB8 LINE L1 -858 5385 5206 2338 92 0 3 chr20 26288114 26288417 -45865465 + AluSq SINE Alu 3 304 -9 2665 158 49 80 chr20 26288417 26288827 -45865055 - L1MB8 LINE L1 -1037 5206 4822 7294 218 80 48 chr20 26288842 26289651 -45864231 - L1MB8 LINE L1 -1560 4655 3874 2225 170 9 0 chr20 26289651 26289992 -45863890 + MER2 DNA MER2_type 1 344 0 7294 218 80 48 chr20 26289992 26291916 -45861966 - L1MB8 LINE L1 -2341 3874 1883 375 238 50 32 chr20 26292187 26292373 -45861509 - L1ME1 LINE L1 -4589 2368 2185 2296 75 0 0 chr20 26292406 26292740 -45861142 - AluY SINE Alu 0 334 1 1740 89 9 5 chr20 26292743 26292967 -45860915 - AluSg/x SINE Alu -17 295 71 486 289 28 17 chr20 26292976 26293156 -45860726 - L1ME1 LINE L1 -5880 979 798 1549 183 49 3 chr20 26293158 26293443 -45860439 - AluJb SINE Alu -13 299 2 441 0 0 0 chr20 26293443 26293492 -45860390 + (TG)n Simple_repeat Simple_repeat 2 50 0 1105 218 53 15 chr20 26293492 26293754 -45860128 - AluJo SINE Alu -35 277 6 599 199 151 7 chr20 26293853 26293999 -45859883 - L1ME1 LINE L1 -6691 168 2 691 252 81 24 chr20 26294122 26294368 -45859514 + MIR SINE MIR 3 262 0 180 0 0 0 chr20 26295433 26295453 -45858429 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 674 213 14 0 chr20 26295954 26296095 -45857787 + MER58A DNA MER1_type 46 188 -36 844 208 0 0 chr20 26296793 26296937 -45856945 - FRAM SINE Alu -30 146 3 1559 199 42 24 chr20 26296955 26297291 -45856591 - L1MB7 LINE L1 -9 6175 5834 367 347 98 15 chr20 26297913 26298178 -45855704 - L2 LINE L2 -604 2710 2424 221 325 0 0 chr20 26299807 26299884 -45853998 + (TA)n Simple_repeat Simple_repeat 1 77 0 378 0 0 0 chr20 26301998 26302040 -45851842 + (TG)n Simple_repeat Simple_repeat 2 43 0 2110 109 0 3 chr20 26302142 26302447 -45851435 + AluSx SINE Alu 1 304 0 21 0 0 0 chr20 26303095 26303116 -45850766 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr20 26303541 26303580 -45850302 + (CA)n Simple_repeat Simple_repeat 1 39 0 23 0 0 0 chr20 26303866 26303889 -45849993 + AT_rich Low_complexity Low_complexity 1 23 0 398 147 27 0 chr20 26304626 26304701 -45849181 - L1MB4 LINE L1 -5 6175 6099 693 161 67 13 chr20 26305353 26305502 -45848380 + MER58C DNA MER1_type 59 215 0 531 315 88 38 chr20 26306864 26307261 -45846621 - L2 LINE L2 -858 2456 2040 262 258 0 15 chr20 26308130 26308196 -45845686 + Charlie4 DNA MER1_type 1884 1948 -13 2087 127 0 10 chr20 26308319 26308618 -45845264 + AluSx SINE Alu 1 296 -16 2538 250 162 23 chr20 26308706 26309779 -45844103 - L2 LINE L2 -1 3312 2029 916 87 87 0 chr20 26309779 26309906 -45843976 - MER85 DNA T2_type -1 138 1 2538 250 162 23 chr20 26309906 26310124 -45843758 - L2 LINE L2 -1284 2029 1843 207 0 0 0 chr20 26310824 26310847 -45843035 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1171 156 0 0 chr20 26312280 26312453 -45841429 + AluSg/x SINE Alu 125 297 -13 280 150 0 0 chr20 26313231 26313271 -45840611 + Alu SINE Alu 248 287 -15 564 260 52 74 chr20 26314778 26315009 -45838873 - MIR SINE MIR 0 262 37 28 33 0 49 chr20 26315414 26315475 -45838407 + AT_rich Low_complexity Low_complexity 1 58 0 206 198 12 49 chr20 26315727 26315808 -45838074 + (TTATA)n Simple_repeat Simple_repeat 4 81 0 26 50 0 0 chr20 26315928 26315968 -45837914 + AT_rich Low_complexity Low_complexity 1 40 0 254 277 12 0 chr20 26317878 26317961 -45835921 + (TA)n Simple_repeat Simple_repeat 2 85 0 2246 113 3 0 chr20 26318749 26319058 -45834824 - AluSg SINE Alu 0 310 1 2268 91 7 0 chr20 26320777 26321084 -45832798 - AluY SINE Alu -2 309 1 1330 153 0 0 chr20 26321688 26321911 -45831971 + AluJb SINE Alu 87 309 0 2568 48 0 0 chr20 26322386 26322695 -45831187 + AluY SINE Alu 1 309 -2 2994 186 60 3 chr20 26323359 26324152 -45829730 - L1M3 LINE L1 -645 5538 4701 23 68 0 0 chr20 26324211 26324255 -45829627 + AT_rich Low_complexity Low_complexity 1 44 0 2190 97 0 10 chr20 26324473 26324772 -45829110 - AluSx SINE Alu -16 296 1 296 356 87 0 chr20 26324872 26324976 -45828906 - MIR SINE MIR -146 116 4 253 86 100 0 chr20 26325256 26325326 -45828556 + (TA)n Simple_repeat Simple_repeat 1 77 0 303 282 94 0 chr20 26325328 26325413 -45828469 + L1MC4 LINE L1 6617 6709 -1333 1884 161 0 13 chr20 26325653 26325952 -45827930 + AluJo SINE Alu 4 298 -14 23 33 0 0 chr20 26326378 26326408 -45827474 + AT_rich Low_complexity Low_complexity 1 30 0 190 328 0 0 chr20 26326501 26326562 -45827320 - MIR SINE MIR -57 151 91 1072 121 99 17 chr20 26327846 26328078 -45825804 - L1MA4 LINE L1 -3 6297 6047 26 30 0 0 chr20 26328085 26328118 -45825764 + AT_rich Low_complexity Low_complexity 1 33 0 834 152 38 0 chr20 26328361 26328519 -45825363 - L1MB4 LINE L1 -6 6174 6011 725 169 113 12 chr20 26328527 26328714 -45825168 - L1MB4 LINE L1 -336 5838 5633 216 224 61 0 chr20 26328944 26328993 -45824889 + MIR SINE MIR 41 92 -170 1284 178 220 31 chr20 26328993 26329415 -45824467 + Charlie1b DNA MER1_type 20 521 -2 510 310 43 19 chr20 26329422 26329680 -45824202 - L1MB4 LINE L1 -513 5651 5388 1853 132 38 14 chr20 26331389 26331678 -45822204 + AluSx SINE Alu 1 296 -16 652 226 12 54 chr20 26334878 26335046 -45818836 + MER105 DNA DNA 2 162 -42 1926 72 0 0 chr20 26336078 26336315 -45817567 - AluY SINE Alu -19 292 56 229 267 24 37 chr20 26336363 26336481 -45817401 - L1ME LINE L1 -322 5799 5679 1856 157 7 0 chr20 26336666 26336960 -45816922 + AluJb SINE Alu 3 298 -14 493 96 70 0 chr20 26337939 26338095 -45815787 + (TA)n Simple_repeat Simple_repeat 1 167 0 606 78 39 30 chr20 26338148 26338381 -45815501 + (TA)n Simple_repeat Simple_repeat 1 235 0 2143 93 0 40 chr20 26338405 26338729 -45815153 + AluY SINE Alu 1 311 0 394 287 50 0 chr20 26339183 26339364 -45814518 - L1ME LINE L1 -679 5485 5296 547 264 73 69 chr20 26339596 26339857 -45814025 + MIR SINE MIR 1 262 0 6546 123 46 4 chr20 26340915 26342485 -45811397 - L1MA3 LINE L1 -6 6299 4663 32 43 0 0 chr20 26344591 26344637 -45809245 + AT_rich Low_complexity Low_complexity 1 46 0 1980 246 72 57 chr20 26344802 26345141 -45808741 - L1ME3A LINE L1 -4 6166 5833 2030 138 10 0 chr20 26345141 26345446 -45808436 - AluSg SINE Alu -1 309 2 1980 246 72 57 chr20 26345446 26346096 -45807786 - L1ME3A LINE L1 -337 5833 5160 475 152 65 0 chr20 26346096 26346188 -45807694 + L1MC4 LINE L1 7945 8042 0 2254 264 78 50 chr20 26346250 26347722 -45806160 - L1ME3A LINE L1 -1774 4372 2860 551 291 11 33 chr20 26347768 26347950 -45805932 - L1ME LINE L1 -459 5662 5485 2338 50 0 0 chr20 26347950 26348277 -45805605 - AluY SINE Alu 0 327 1 261 108 0 0 chr20 26348304 26348341 -45805541 + Alu SINE Alu 1 37 -265 886 143 20 7 chr20 26348345 26348492 -45805390 + FRAM SINE Alu 1 146 -30 1963 137 13 3 chr20 26349397 26349697 -45804185 - AluSx SINE Alu -9 303 1 378 327 77 19 chr20 26350604 26350760 -45803122 + MIR SINE MIR 77 241 -21 330 26 0 0 chr20 26353843 26353882 -45800000 + (CA)n Simple_repeat Simple_repeat 2 40 0 523 296 28 17 chr20 26355496 26355672 -45798210 - MIR SINE MIR 0 262 85 1706 168 3 7 chr20 26356646 26356931 -45796951 - AluJb SINE Alu -28 284 1 23 68 0 0 chr20 26357143 26357187 -45796695 + AT_rich Low_complexity Low_complexity 1 44 0 299 286 163 14 chr20 26360261 26360408 -45793474 - MIR3 SINE MIR -25 183 15 308 218 121 100 chr20 26368136 26368416 -45785466 - L1M2 LINE L1 -5706 1143 858 321 269 81 122 chr20 26368876 26369385 -45784497 + L1M2 LINE L1 717 1204 -5645 31 0 0 0 chr20 26372517 26372548 -45781334 + AT_rich Low_complexity Low_complexity 1 31 0 227 229 42 0 chr20 26372696 26372744 -45781138 - L1MC/D LINE L1 -1884 5924 5875 33 56 0 0 chr20 26375553 26375607 -45778275 + AT_rich Low_complexity Low_complexity 1 54 0 25 90 0 0 chr20 26375796 26375863 -45778019 + AT_rich Low_complexity Low_complexity 1 67 0 2508 58 0 0 chr20 26377110 26377405 -45776477 + AluY SINE Alu 17 311 0 329 311 97 15 chr20 26377427 26377623 -45776259 - L3 LINE CR1 -169 1408 1197 2259 159 97 0 chr20 26377805 26378196 -45775686 + MSTB1 LTR MaLR 1 429 -3 318 180 0 0 chr20 26378307 26378368 -45775514 + (TA)n Simple_repeat Simple_repeat 1 61 0 1976 138 3 3 chr20 26378685 26378975 -45774907 - AluSx SINE Alu -22 290 1 1756 183 13 0 chr20 26379187 26379493 -45774389 - AluJb SINE Alu -2 310 1 1102 210 84 52 chr20 26379658 26379771 -45774111 - MER33 DNA MER1_type -2261 324 216 888 126 0 37 chr20 26379771 26379906 -45773976 + FLAM_C SINE Alu 1 130 -3 1102 210 84 52 chr20 26379906 26380102 -45773780 - MER33 DNA MER1_type -2369 216 5 1794 188 52 0 chr20 26380114 26380438 -45773444 + MER58B DNA MER1_type 1 341 0 274 250 50 0 chr20 26380750 26380763 -45773119 - L1MC/D LINE L1 -287 5834 5823 1586 147 16 67 chr20 26380763 26381077 -45772805 - AluJo SINE Alu -14 298 1 274 250 50 0 chr20 26381077 26381186 -45772696 - L1MC/D LINE L1 -298 5823 5719 471 226 96 92 chr20 26381208 26381330 -45772552 - L1MC/D LINE L1 -376 5745 5625 1686 191 0 3 chr20 26381330 26381633 -45772249 - AluJo SINE Alu -10 302 1 471 226 96 92 chr20 26381633 26381771 -45772111 - L1MC/D LINE L1 -496 5625 5484 1999 99 85 3 chr20 26382089 26382372 -45771510 + AluSx SINE Alu 1 306 -6 275 244 69 36 chr20 26382387 26382489 -45771393 + MIR SINE MIR 54 160 -48 1986 153 59 28 chr20 26382603 26382994 -45770888 - L1MA5 LINE L1 0 7002 6600 11381 154 63 87 chr20 26382996 26385033 -45768849 - L1MA5 LINE L1 -816 6032 3850 1015 190 0 77 chr20 26385033 26385254 -45768628 - AluJo SINE Alu -23 289 86 11381 154 63 87 chr20 26385254 26385723 -45768159 - L1MA5 LINE L1 -2998 3850 3371 28311 118 15 76 chr20 26385724 26390870 -45763012 + L1P LINE L1 12 4845 -1301 3685 38 0 2 chr20 26390870 26391285 -45762597 + L1PA6 LINE L1 5735 6150 -4 940 88 22 0 chr20 26391299 26391436 -45762446 + L1MB3 LINE L1 6044 6183 0 3022 77 3 10 chr20 26391451 26391840 -45762042 + L1PA7 LINE L1 5769 6154 0 2317 167 34 23 chr20 26391841 26392453 -45761429 - L1MA5 LINE L1 -3453 3395 2763 1591 179 53 0 chr20 26392453 26392609 -45761273 - AluJb SINE Alu -25 287 110 399 89 0 0 chr20 26392609 26392665 -45761217 + (TG)n Simple_repeat Simple_repeat 1 56 0 1591 179 53 0 chr20 26392665 26392771 -45761111 - AluJb SINE Alu -202 110 11 2317 167 34 23 chr20 26392771 26393231 -45760651 - L1MA5 LINE L1 -4085 2763 2310 972 191 0 6 chr20 26393233 26393401 -45760481 - AluJ SINE Alu -16 296 130 228 67 0 0 chr20 26393403 26393433 -45760449 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 1604 157 30 11 chr20 26393442 26393710 -45760172 - AluSx SINE Alu -39 273 1 850 183 0 29 chr20 26393710 26393847 -45760035 - AluJ SINE Alu -176 136 4 676 224 11 11 chr20 26393855 26394029 -45759853 - L1MA5 LINE L1 -4530 2319 2146 518 184 13 26 chr20 26394034 26394186 -45759696 + C-rich Low_complexity Low_complexity 5 154 0 548 240 189 17 chr20 26394189 26394364 -45759518 - AluJo SINE Alu 0 312 108 2220 136 116 35 chr20 26394364 26394760 -45759122 - MSTA LTR MaLR 0 428 1 9923 132 13 36 chr20 26394794 26396404 -45757478 - MSTA-int LTR MaLR -5 1575 3 2375 128 128 13 chr20 26396406 26396790 -45757092 - MSTA LTR MaLR 0 428 1 769 139 0 0 chr20 26396793 26396901 -45756981 - AluJo SINE Alu -203 109 2 2979 199 100 35 chr20 26396904 26397007 -45756875 - L1MA5 LINE L1 -4665 2184 2089 1033 126 0 161 chr20 26397007 26397237 -45756645 - 7SK RNA RNA 0 193 1 2979 199 100 35 chr20 26397237 26397490 -45756392 - L1MA5 LINE L1 -4760 2089 1854 1540 117 0 0 chr20 26397490 26397696 -45756186 - AluSg/x SINE Alu -19 291 86 2979 199 100 35 chr20 26397696 26398208 -45755674 - L1MA5 LINE L1 -4995 1854 1258 270 253 152 20 chr20 26399125 26399224 -45754658 + MIR3 SINE MIR 45 156 -52 667 216 0 9 chr20 26399383 26399499 -45754383 + FLAM_A SINE Alu 2 116 -17 312 302 167 32 chr20 26399534 26399882 -45754000 + L1ME LINE L1 5337 5731 -390 2204 189 138 51 chr20 26400334 26400574 -45753308 - L1MCb LINE L1 -4835 1729 1511 2222 112 3 0 chr20 26400574 26400868 -45753014 - AluSx SINE Alu -17 295 1 2204 189 138 51 chr20 26400868 26401293 -45752589 - L1MCb LINE L1 -5053 1511 1125 2291 108 0 16 chr20 26401293 26401608 -45752274 - AluSq SINE Alu -3 310 1 2204 189 138 51 chr20 26401608 26401932 -45751950 - L1MCb LINE L1 -5439 1125 630 1645 262 21 36 chr20 26402048 26402574 -45751308 - L1MCb LINE L1 -5407 638 121 2476 80 6 0 chr20 26403198 26403509 -45750373 - AluSq SINE Alu 0 313 1 195 245 61 51 chr20 26403672 26403770 -45750112 - MIR SINE MIR -102 160 62 2010 134 22 0 chr20 26403820 26404122 -45749760 - AluSx SINE Alu 0 308 1 535 259 14 0 chr20 26404131 26404274 -45749608 - L1ME1 LINE L1 -2 6164 6020 * 591 234 101 82 chr20 26404272 26404529 -45749353 - L1M4 LINE L1 -1098 5048 4787 717 268 119 64 chr20 26406379 26406616 -45747266 - L1ME1 LINE L1 -301 5820 5598 2383 70 0 10 chr20 26406616 26406914 -45746968 + AluY SINE Alu 1 295 -16 717 268 119 64 chr20 26406914 26407358 -45746524 - L1ME1 LINE L1 -523 5598 5106 23 0 0 0 chr20 26407375 26407398 -45746484 + AT_rich Low_complexity Low_complexity 1 23 0 1866 196 55 18 chr20 26407813 26407884 -45745998 - LTR52 LTR ERVL -3 418 351 249 33 0 0 chr20 26407884 26407914 -45745968 + (CA)n Simple_repeat Simple_repeat 2 31 0 1866 196 55 18 chr20 26407914 26408241 -45745641 - LTR52 LTR ERVL -70 351 5 1350 182 238 6 chr20 26410336 26410618 -45743264 + MLT2D LTR ERVL 1 367 -30 230 0 33 0 chr20 26410618 26410648 -45743234 + (TA)n Simple_repeat Simple_repeat 2 32 0 1350 182 238 6 chr20 26410648 26410684 -45743198 + MLT2D LTR ERVL 367 393 -4 610 188 9 0 chr20 26410705 26410817 -45743065 - Tigger5 DNA MER2_type 0 2323 2211 2302 115 0 6 chr20 26410832 26411146 -45742736 + AluSx SINE Alu 1 312 0 1529 190 19 35 chr20 26411289 26411600 -45742282 - AluJo SINE Alu -1 311 6 2283 102 0 0 chr20 26412243 26412536 -45741346 - AluSx SINE Alu -19 293 1 191 333 60 24 chr20 26412543 26412627 -45741255 - L2 LINE L2 -16 3256 3170 1814 233 102 19 chr20 26412721 26413370 -45740512 - L1ME1 LINE L1 -1267 4879 4177 2300 204 28 48 chr20 26413387 26413637 -45740245 + L1ME1 LINE L1 3815 4068 -2078 2152 116 10 10 chr20 26413637 26413947 -45739935 + AluSg SINE Alu 1 310 0 2300 204 28 48 chr20 26413947 26414375 -45739507 + L1ME1 LINE L1 4068 4484 -1662 2416 94 0 0 chr20 26414383 26414691 -45739191 + AluSg SINE Alu 1 308 -2 533 165 127 32 chr20 26414693 26414851 -45739031 + L1ME1 LINE L1 4991 5163 -983 * 1011 191 128 83 chr20 26414839 26415262 -45738620 + L1ME1 LINE L1 5723 6164 -2 396 301 107 27 chr20 26415273 26415639 -45738243 - L1MC/D LINE L1 -2159 5649 5255 296 193 23 53 chr20 26416126 26416225 -45737657 + LTR16A1 LTR ERVL 150 244 -206 2822 57 3 11 chr20 26416370 26416737 -45737145 + L1PA7 LINE L1 5788 6151 -3 2378 95 0 0 chr20 26416790 26417095 -45736787 + AluSg SINE Alu 1 305 -5 463 254 179 0 chr20 26417111 26417284 -45736598 + LTR16A LTR ERVL 241 444 -6 303 244 47 71 chr20 26417672 26417799 -45736083 - L1MDa LINE L1 -3961 2579 2456 26 30 0 0 chr20 26418058 26418091 -45735791 + AT_rich Low_complexity Low_complexity 1 33 0 1985 108 4 8 chr20 26418237 26418505 -45735377 - AluSx SINE Alu -14 298 32 2191 216 75 9 chr20 26418892 26419569 -45734313 - L1MC/D LINE L1 -1517 4629 3908 477 118 82 0 chr20 26419581 26419666 -45734216 - AluSg/x SINE Alu -8 304 213 543 217 91 59 chr20 26419668 26419757 -45734125 - L1MC/D LINE L1 -2161 3985 3900 1702 161 28 14 chr20 26419757 26420048 -45733834 - AluSx SINE Alu -17 295 1 543 217 91 59 chr20 26420048 26420179 -45733703 - L1MC/D LINE L1 -2246 3900 3758 423 83 0 0 chr20 26420399 26420459 -45733423 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 1992 224 69 38 chr20 26420464 26420575 -45733307 - L1MC4a LINE L1 -743 5403 5297 1647 154 33 30 chr20 26420575 26420874 -45733008 - AluJo SINE Alu -2 310 11 1992 224 69 38 chr20 26420874 26421514 -45732368 - L1MC4a LINE L1 -849 5297 5149 2623 52 0 0 chr20 26421621 26421929 -45731953 - AluY SINE Alu -3 308 1 3329 241 27 29 chr20 26422505 26423536 -45730346 + L1MC4 LINE L1 6440 7468 -574 1496 131 27 5 chr20 26423701 26423923 -45729959 - MER30 DNA MER1_type 0 230 4 2200 116 3 3 chr20 26424224 26424526 -45729356 - AluSq SINE Alu -11 302 1 1829 146 0 39 chr20 26425220 26425528 -45728354 - AluJb SINE Alu -16 296 1 468 207 68 44 chr20 26425572 26425694 -45728188 + MIR3 SINE MIR 49 176 -32 439 339 61 91 chr20 26426145 26426585 -45727297 - L2 LINE L2 -15 3257 2831 947 245 68 34 chr20 26427177 26427503 -45726379 - MER46C DNA MER2_type -1 337 1 200 317 0 0 chr20 26427538 26427598 -45726284 - L2 LINE L2 -217 3055 2996 5696 107 51 2 chr20 26427653 26429254 -45724628 - L1PA11 LINE L1 0 6174 4492 349 328 167 0 chr20 26429794 26429998 -45723884 + MIR SINE MIR 1 238 -24 2238 121 0 0 chr20 26430072 26430370 -45723512 - AluSx SINE Alu -14 298 1 1069 95 154 0 chr20 26432811 26432980 -45720902 + L1PB1 LINE L1 5957 6151 0 664 190 17 0 chr20 26432989 26433105 -45720777 + FLAM_C SINE Alu 1 118 -15 1440 89 0 0 chr20 26433142 26433321 -45720561 - AluSx SINE Alu -93 219 41 1196 105 70 0 chr20 26433320 26433491 -45720391 + AluSg/x SINE Alu 114 296 -16 * 672 152 0 2 chr20 26433717 26433981 -45719901 + AluSx SINE Alu 1 312 0 735 274 78 24 chr20 26434012 26434395 -45719487 + L1ME LINE L1 5309 5712 -409 331 204 0 73 chr20 26434862 26434999 -45718883 - LTR33 LTR ERVL -391 130 4 1460 251 166 10 chr20 26435462 26435963 -45717919 + MLT1G1 LTR MaLR 2 580 -15 2060 96 48 0 chr20 26436206 26436541 -45717341 + AluSx SINE Alu 1 348 0 348 285 100 18 chr20 26437040 26437085 -45716797 + L1MC5 LINE L1 7660 7700 -342 471 245 172 13 chr20 26437085 26437236 -45716646 - MER96 DNA MER1_type 0 175 1 348 285 100 18 chr20 26437236 26437492 -45716390 + L1MC5 LINE L1 7700 8002 -40 508 271 135 16 chr20 26437821 26438013 -45715869 + MIR SINE MIR 24 238 -24 416 168 53 0 chr20 26439377 26439472 -45714410 + MER5B DNA MER1_type 75 174 -4 463 274 51 40 chr20 26439495 26439670 -45714212 - MER5B DNA MER1_type -1 177 1 254 217 82 94 chr20 26441642 26441886 -45711996 - L1ME LINE L1 -342 5779 5539 270 0 0 0 chr20 26442068 26442098 -45711784 + (TG)n Simple_repeat Simple_repeat 1 30 0 653 292 210 6 chr20 26443334 26443842 -45710040 - L2 LINE L2 0 3313 2704 939 70 78 0 chr20 26444208 26444337 -45709545 - MER85 DNA T2_type 0 139 1 266 267 9 67 chr20 26444564 26444669 -45709213 + MLT1H LTR MaLR 255 353 -196 239 185 0 77 chr20 26444739 26444804 -45709078 + MLT1H LTR MaLR 488 547 -2 745 213 20 0 chr20 26445750 26445900 -45707982 + FRAM SINE Alu 1 153 -13 979 247 80 52 chr20 26446368 26446812 -45707070 + MLT1J LTR MaLR 1 457 -54 294 47 23 0 chr20 26446812 26446855 -45707027 - MLT2B1 LTR ERVL -1 463 420 1428 151 42 85 chr20 26446894 26447038 -45706844 + MER2 DNA MER2_type 1 150 -195 2101 118 38 0 chr20 26447038 26447326 -45706556 - AluSx SINE Alu -13 299 1 1428 151 42 85 chr20 26447326 26447512 -45706370 + MER2 DNA MER2_type 150 317 -28 345 47 0 0 chr20 26447554 26447597 -45706285 + (GA)n Simple_repeat Simple_repeat 2 44 0 2066 171 75 30 chr20 26447601 26448028 -45705854 - MLT2B1 LTR ERVL -74 446 1 274 196 0 0 chr20 26448032 26448088 -45705794 + MLT1J LTR MaLR 454 509 -2 248 274 0 17 chr20 26448522 26448639 -45705243 + CT-rich Low_complexity Low_complexity 2 116 0 948 196 17 124 chr20 26448643 26448990 -45704892 - L1ME3 LINE L1 -22 6140 5831 257 316 15 15 chr20 26449102 26449238 -45704644 + L1MEd LINE L1 1154 1289 -4916 471 254 15 8 chr20 26449383 26449517 -45704365 + L1ME2 LINE L1 6027 6161 -3 237 167 0 0 chr20 26449661 26449709 -45704173 + L1MEd LINE L1 1619 1666 -4730 2267 118 0 0 chr20 26449782 26450087 -45703795 + AluSg SINE Alu 1 305 -5 2599 55 0 3 chr20 26450215 26450526 -45703356 + AluY SINE Alu 1 310 -1 2207 102 0 7 chr20 26450716 26451075 -45702807 + AluSx SINE Alu 1 357 0 1806 79 26 0 chr20 26451081 26451308 -45702574 - AluY SINE Alu -78 233 1 335 22 0 22 chr20 26502634 26502679 -45651203 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 1078 249 73 18 chr20 26503336 26503718 -45650164 - L1ME3A LINE L1 -9 6161 5759 1686 260 43 9 chr20 26506226 26506688 -45647194 - MER110 LTR ERV1 0 491 14 2144 176 52 57 chr20 26506794 26507214 -45646668 + MER47B DNA MER2_type 1 418 0 2451 231 63 27 chr20 26508242 26508864 -45645018 - MER82 DNA MER2_type -1 652 9 235 279 121 7 chr20 26510029 26510169 -45643713 + LTR16A LTR ERVL 106 261 -189 2361 133 47 20 chr20 26510740 26510984 -45642898 - MSTA LTR MaLR 0 428 167 2141 109 0 7 chr20 26510984 26511301 -45642581 + AluSq SINE Alu 1 313 0 2361 133 47 20 chr20 26511301 26511461 -45642421 - MSTA LTR MaLR -261 167 13 2214 171 16 25 chr20 26511680 26512119 -45641763 + L1MC3 LINE L1 6673 7107 -678 240 313 0 0 chr20 26512119 26512186 -45641696 + MLT1F1 LTR MaLR 45 111 -456 583 179 36 0 chr20 26512186 26512298 -45641584 + L1MC3 LINE L1 7175 7290 -495 1933 159 28 0 chr20 26512315 26512636 -45641246 + MER46B DNA MER2_type 32 236 0 2870 143 33 4 chr20 26512636 26513118 -45640764 + L1MC3 LINE L1 7289 7784 -1 1808 259 74 4 chr20 26513195 26513654 -45640228 + MER110 LTR ERV1 1 491 0 532 356 49 11 chr20 26514581 26514949 -45638933 + LTR16B LTR ERVL 76 457 -7 416 244 173 19 chr20 26515271 26515427 -45638455 + LTR33 LTR ERVL 42 221 -300 262 286 10 0 chr20 26515477 26515575 -45638307 + LTR33 LTR ERVL 308 406 -115 21 0 0 0 chr20 26515753 26515774 -45638108 + AT_rich Low_complexity Low_complexity 1 21 0 225 240 0 0 chr20 26516276 26516351 -45637531 + (CA)n Simple_repeat Simple_repeat 2 76 0 192 350 111 14 chr20 26517073 26517290 -45636592 + L2 LINE L2 2842 3079 -193 372 311 6 18 chr20 26517750 26517917 -45635965 + (CATA)n Simple_repeat Simple_repeat 3 167 0 21 0 0 0 chr20 26517995 26518016 -45635866 + AT_rich Low_complexity Low_complexity 1 21 0 215 178 0 22 chr20 26518520 26518565 -45635317 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 128 128 21 chr20 26519463 26519510 -45634372 + MIR SINE MIR 21 72 -136 573 160 11 11 chr20 26520044 26520138 -45633744 + MLT1A2 LTR MaLR 1 94 -280 1378 206 34 31 chr20 26520295 26520644 -45633238 + MLT1A2 LTR MaLR 17 366 -8 1796 111 4 4 chr20 26520777 26521021 -45632861 - AluSq SINE Alu -69 244 1 195 246 0 0 chr20 26521317 26521374 -45632508 + (TA)n Simple_repeat Simple_repeat 2 58 0 739 259 141 71 chr20 26521443 26521877 -45632005 - MLT1F1 LTR MaLR -8 541 37 657 250 45 35 chr20 26522330 26522666 -45631216 - LTR16A LTR ERVL -30 420 21 369 254 18 27 chr20 26522676 26522786 -45631096 - MER5A DNA MER1_type -42 147 39 195 100 0 0 chr20 26523619 26523649 -45630233 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 26 0 0 0 chr20 26525050 26525076 -45628806 + AT_rich Low_complexity Low_complexity 1 26 0 222 62 0 0 chr20 26525143 26525175 -45628707 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 2278 124 0 0 chr20 26525870 26526176 -45627706 + AluSx SINE Alu 1 306 -6 315 240 86 74 chr20 26526693 26526868 -45627014 - MER5B DNA MER1_type -1 177 1 1991 161 3 0 chr20 26526912 26527222 -45626660 - AluJo SINE Alu -1 311 1 311 156 26 65 chr20 26527224 26527301 -45626581 - MER5A DNA MER1_type -115 74 1 1393 282 123 15 chr20 26527319 26527840 -45626042 + MLT1K LTR MaLR 4 580 -8 2147 119 7 0 chr20 26528263 26528557 -45625325 - AluSx SINE Alu -16 296 1 737 240 50 0 chr20 26528620 26528799 -45625083 + MER5A DNA MER1_type 2 189 0 1155 160 52 4 chr20 26529962 26530193 -45623689 - L1MB3 LINE L1 0 6183 5942 2225 112 0 7 chr20 26530527 26530831 -45623051 - AluSx SINE Alu -3 309 8 279 214 0 0 chr20 26530849 26530905 -45622977 + Charlie8 DNA MER1_type 92 147 -2270 2227 245 121 14 chr20 26530916 26531690 -45622192 + L1ME2 LINE L1 5299 6155 -9 498 290 17 40 chr20 26532352 26532528 -45621354 + MIR3 SINE MIR 5 176 -32 1796 229 13 0 chr20 26532868 26533257 -45620625 + L1MD3 LINE L1 7602 7995 0 257 353 10 0 chr20 26533366 26533468 -45620414 + MER5A DNA MER1_type 82 184 -5 258 56 0 0 chr20 26533493 26533529 -45620353 + (TG)n Simple_repeat Simple_repeat 1 36 0 198 0 0 0 chr20 26533528 26533550 -45620332 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 35 0 0 0 chr20 26533646 26533681 -45620201 + AT_rich Low_complexity Low_complexity 1 35 0 588 84 0 0 chr20 26533855 26533938 -45619944 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 1931 128 68 0 chr20 26535692 26535973 -45617909 + AluSx SINE Alu 1 300 -12 1623 145 112 15 chr20 26535996 26536265 -45617617 - AluJo SINE Alu -17 295 1 2022 143 39 26 chr20 26536683 26537069 -45616813 + L1MB3 LINE L1 5793 6183 0 238 324 73 45 chr20 26537576 26537755 -45616127 + L1ME LINE L1 5457 5640 -481 3085 43 8 0 chr20 26537760 26538133 -45615749 - L1PA8 LINE L1 -4 6168 5793 1786 166 10 13 chr20 26538167 26538480 -45615402 + AluJo SINE Alu 1 312 0 330 194 15 0 chr20 26538536 26538603 -45615279 + L2 LINE L2 3201 3268 -4 24 32 0 0 chr20 26538603 26538634 -45615248 + AT_rich Low_complexity Low_complexity 1 31 0 592 191 17 0 chr20 26538758 26538873 -45615009 - FLAM_A SINE Alu -3 139 23 363 221 88 18 chr20 26538881 26538994 -45614888 - MIR SINE MIR -46 216 96 2222 114 0 0 chr20 26540450 26540748 -45613134 + AluSx SINE Alu 1 298 -14 2457 82 0 0 chr20 26541646 26541950 -45611932 - AluSc SINE Alu -5 304 1 216 0 0 0 chr20 26542082 26542106 -45611776 + (T)n Simple_repeat Simple_repeat 1 24 0 2487 139 30 14 chr20 26542137 26542568 -45611314 - L1MB2 LINE L1 -2 6169 5732 618 240 164 70 chr20 26542951 26543396 -45610486 + MLT1H LTR MaLR 62 548 -1 333 299 111 34 chr20 26543722 26543929 -45609953 + MIR SINE MIR 26 248 -14 278 325 106 0 chr20 26544007 26544130 -45609752 - L3 LINE CR1 -107 1470 1335 823 214 86 0 chr20 26544212 26544399 -45609483 + MER3 DNA MER1_type 1 203 -6 220 301 85 26 chr20 26544429 26544582 -45609300 - L3 LINE CR1 -339 1238 1077 341 267 127 68 chr20 26544736 26544972 -45608910 - L3 LINE CR1 -519 1058 809 2319 141 58 19 chr20 26544972 26545384 -45608498 + MSTA LTR MaLR 1 428 0 267 229 14 14 chr20 26545773 26545843 -45608039 + Tigger5 DNA MER2_type 2251 2320 -3 379 209 157 0 chr20 26545894 26546028 -45607854 - MER5C DNA MER1_type -10 314 160 1519 283 75 14 chr20 26546227 26546655 -45607227 + MLT1H1 LTR MaLR 30 493 -62 2062 145 0 22 chr20 26546655 26546966 -45606916 + AluJo SINE Alu 1 304 -8 1519 283 75 14 chr20 26546966 26547031 -45606851 + MLT1H1 LTR MaLR 493 553 -2 1541 256 100 33 chr20 26547358 26547727 -45606155 + MLT1E LTR MaLR 114 520 -73 1381 149 145 30 chr20 26547727 26547978 -45605904 + AluJo SINE Alu 1 285 -27 201 39 0 0 chr20 26547978 26548004 -45605878 + (CAATA)n Simple_repeat Simple_repeat 3 28 0 1541 256 100 33 chr20 26548014 26548094 -45605788 + MLT1E LTR MaLR 520 593 0 1069 236 54 6 chr20 26548094 26548491 -45605391 + MLT1E-int LTR MaLR 1 535 -836 321 332 37 14 chr20 26549306 26549523 -45604359 - L1M4 LINE L1 -2911 3235 3014 276 237 13 13 chr20 26549695 26549771 -45604111 - L1MC4 LINE L1 0 8042 7967 317 281 0 7 chr20 26549792 26549945 -45603937 + (TATG)n Simple_repeat Simple_repeat 3 154 0 434 182 0 68 chr20 26549969 26550161 -45603721 + (TATG)n Simple_repeat Simple_repeat 2 180 0 386 262 0 16 chr20 26550130 26550313 -45603569 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 793 223 33 73 chr20 26550315 26550589 -45603293 - L1MC4 LINE L1 -126 7916 7654 878 144 8 0 chr20 26551009 26551141 -45602741 + AluJo SINE Alu 1 133 -169 657 244 73 76 chr20 26551163 26551182 -45602700 + L1MC4a LINE L1 6181 6199 -1609 2577 60 0 0 chr20 26551182 26551483 -45602399 + AluY SINE Alu 1 301 -10 657 244 73 76 chr20 26551483 26551807 -45602075 + L1MC4a LINE L1 6199 6523 -1285 925 186 6 0 chr20 26551808 26551964 -45601918 + AluJo SINE Alu 134 290 -22 801 113 14 7 chr20 26551968 26552110 -45601772 + (GAAA)n Simple_repeat Simple_repeat 4 146 0 537 110 0 0 chr20 26552113 26552195 -45601687 + (GGGGA)n Simple_repeat Simple_repeat 5 86 0 842 225 23 14 chr20 26552238 26552456 -45601426 + L1MC4 LINE L1 6854 7073 -969 919 246 167 57 chr20 26552789 26553320 -45600562 - MLT1E1 LTR MaLR -3 651 3 540 299 129 25 chr20 26553464 26553906 -45599976 + L1ME4a LINE L1 5634 6121 0 1103 215 116 55 chr20 26555393 26555737 -45598145 - MLT1A1 LTR MaLR 0 365 1 399 41 0 0 chr20 26556426 26556475 -45597407 + (CA)n Simple_repeat Simple_repeat 1 49 0 618 251 131 26 chr20 26557273 26557623 -45596259 + L1ME4a LINE L1 5577 5963 -158 248 276 105 29 chr20 26557640 26557745 -45596137 - MER91B DNA MER1_type -1 189 77 297 0 0 0 chr20 26558418 26558451 -45595431 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1894 124 3 35 chr20 26558454 26558744 -45595138 - AluSx SINE Alu -31 281 1 1582 179 34 83 chr20 26560638 26561047 -45592835 + MLT1B LTR MaLR 1 389 -1 408 268 113 0 chr20 26562666 26562808 -45591074 + L1MC4 LINE L1 7341 7498 -544 * 667 259 78 96 chr20 26562798 26563426 -45590456 + L1MC4 LINE L1 7320 8042 0 920 174 3 144 chr20 26563539 26563838 -45590044 - L1MB8 LINE L1 0 6178 5922 261 328 0 0 chr20 26573394 26573458 -45580424 + polypurine Low_complexity Low_complexity 3 66 0 323 173 27 0 chr20 26575537 26575612 -45578270 + CT-rich Low_complexity Low_complexity 1 77 0 25 51 0 0 chr20 26575762 26575801 -45578081 + GC_rich Low_complexity Low_complexity 1 39 0 243 226 0 0 chr20 26575935 26575988 -45577894 + C-rich Low_complexity Low_complexity 1 53 0 219 36 0 0 chr20 26577893 26577921 -45575961 + (TTA)n Simple_repeat Simple_repeat 3 30 0 186 71 0 0 chr20 26578452 26578480 -45575402 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 22 35 0 0 chr20 26578661 26578690 -45575192 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr20 26578773 26578797 -45575085 + GC_rich Low_complexity Low_complexity 1 24 0 403 259 25 6 chr20 26581371 26581529 -45572353 + CT-rich Low_complexity Low_complexity 2 162 0 342 0 0 0 chr20 26583026 26583064 -45570818 + (CA)n Simple_repeat Simple_repeat 2 39 0 277 250 0 0 chr20 26584573 26584637 -45569245 - L1ME2 LINE L1 -83 6081 6018 1762 196 3 0 chr20 26585568 26585879 -45568003 - AluJo SINE Alu 0 312 1 355 163 153 20 chr20 26586541 26586639 -45567243 + LTR16C LTR ERVL 373 483 -8 1931 174 25 0 chr20 26587261 26587609 -45566273 + MLT1B LTR MaLR 8 369 -27 338 246 282 7 chr20 26589017 26589159 -45564723 - MER5A DNA MER1_type 0 189 9 263 238 48 86 chr20 26589327 26589432 -45564450 - MIR3 SINE MIR -1 207 107 224 196 51 165 chr20 26589634 26589792 -45564090 + MIR SINE MIR 82 221 -41 1009 176 16 0 chr20 26589984 26590171 -45563711 + MER3 DNA MER1_type 1 190 -19 287 238 100 56 chr20 26590036 26590196 -45563686 - MER3 DNA MER1_type -8 201 35 * 432 229 9 0 chr20 26590592 26590697 -45563185 - Charlie4 DNA MER1_type 0 1961 1856 2476 103 0 0 chr20 26592419 26592731 -45561151 + AluSx SINE Alu 1 312 0 2128 110 40 3 chr20 26593241 26593541 -45560341 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr20 26594529 26594551 -45559331 + AT_rich Low_complexity Low_complexity 1 22 0 2888 217 30 19 chr20 26595004 26595737 -45558145 - L1MC4a LINE L1 0 7808 7068 938 269 29 8 chr20 26596639 26596884 -45556998 - MIR SINE MIR -11 251 2 923 202 0 12 chr20 26597269 26597442 -45556440 - FAM SINE Alu 0 175 5 1534 269 77 27 chr20 26598472 26598976 -45554906 - MLT1G LTR MaLR 0 590 54 1376 199 31 90 chr20 26598976 26599364 -45554518 + MLT1A1 LTR MaLR 1 365 0 1534 269 77 27 chr20 26599364 26599421 -45554461 - MLT1G LTR MaLR -536 54 1 361 242 40 30 chr20 26599521 26599620 -45554262 - MER5A DNA MER1_type -1 188 78 639 304 110 19 chr20 26600024 26600287 -45553595 + LTR16C LTR ERVL 85 371 -120 1236 214 73 38 chr20 26600287 26600628 -45553254 + MLT1A1 LTR MaLR 1 353 -12 460 255 28 0 chr20 26600857 26600963 -45552919 + LTR16C LTR ERVL 383 491 0 2406 89 0 10 chr20 26602892 26603196 -45550686 + AluY SINE Alu 1 301 -10 437 263 168 44 chr20 26603215 26603463 -45550419 - L1MEd LINE L1 -4729 1581 1365 1986 125 33 20 chr20 26603463 26603768 -45550114 - AluSx SINE Alu -3 309 1 437 263 168 44 chr20 26603768 26603951 -45549931 - L1MEd LINE L1 -4945 1365 1063 190 393 22 7 chr20 26603967 26604102 -45549780 + L2 LINE L2 2212 2348 -966 4358 154 56 2 chr20 26604116 26604936 -45548946 - L1MB5 LINE L1 -21 6153 5290 338 289 158 9 chr20 26604937 26605051 -45548831 - L1MEd LINE L1 -5062 1057 927 612 132 0 0 chr20 26605051 26605142 -45548740 + 5S rRNA rRNA 1 91 -30 590 240 63 52 chr20 26605145 26605512 -45548370 - L1MEd LINE L1 -5187 932 562 343 256 56 8 chr20 26605915 26606040 -45547842 + MLT1I LTR MaLR 13 143 -266 22716 46 1 6 chr20 26606136 26609740 -45544142 + L1PA5 LINE L1 2546 6154 0 329 164 90 0 chr20 26609938 26610005 -45543877 + LTR54B LTR ERV1 1 73 -425 1839 79 26 0 chr20 26610632 26610859 -45543023 + AluY SINE Alu 1 233 -78 2230 105 0 7 chr20 26610865 26611224 -45542658 - AluSx SINE Alu 0 357 1 2661 55 0 3 chr20 26611420 26611732 -45542150 - AluY SINE Alu 0 311 1 2307 118 0 0 chr20 26611860 26612165 -45541717 - AluSg SINE Alu -5 305 1 228 274 212 9 chr20 26612238 26612351 -45541531 - L1MEc LINE L1 -4730 1666 1531 480 254 15 8 chr20 26612430 26612564 -45541318 - L1ME2 LINE L1 -3 6161 6027 280 316 15 15 chr20 26612709 26612845 -45541037 - L1MEc LINE L1 -4916 1289 1154 984 193 17 124 chr20 26612957 26613304 -45540578 + L1ME3 LINE L1 5831 6140 -22 248 274 0 17 chr20 26613308 26613425 -45540457 + GA-rich Low_complexity Low_complexity 2 116 0 281 196 0 0 chr20 26613859 26613915 -45539967 - MLT1J LTR MaLR -2 509 454 2058 181 69 35 chr20 26613919 26614350 -45539532 + MLT2B1 LTR ERVL 1 451 -69 381 43 0 0 chr20 26614350 26614397 -45539485 + (TC)n Simple_repeat Simple_repeat 2 48 0 2058 181 69 35 chr20 26614397 26614428 -45539454 + MLT2B1 LTR ERVL 451 479 -41 1429 154 42 85 chr20 26614439 26614625 -45539257 - MER2 DNA MER2_type -28 317 150 2121 118 38 0 chr20 26614625 26614912 -45538970 + AluSx SINE Alu 1 298 -14 1429 154 42 85 chr20 26614912 26615056 -45538826 - MER2 DNA MER2_type -195 150 1 297 47 23 0 chr20 26615095 26615138 -45538744 + MLT2C2 LTR ERVL 420 463 -1 * 1020 245 80 52 chr20 26615138 26615582 -45538300 - MLT1J LTR MaLR -54 457 1 802 207 20 0 chr20 26616050 26616200 -45537682 - FRAM SINE Alu -13 153 1 244 185 0 77 chr20 26617146 26617211 -45536671 - MLT1H LTR MaLR -2 547 488 277 267 9 67 chr20 26617281 26617386 -45536496 - MLT1H LTR MaLR -196 353 255 939 70 78 0 chr20 26617613 26617742 -45536140 + MER85 DNA T2_type 1 139 0 653 292 210 6 chr20 26618108 26618616 -45535266 + L2 LINE L2 2704 3313 0 288 0 0 0 chr20 26619852 26619884 -45533998 + (CA)n Simple_repeat Simple_repeat 1 32 0 254 217 82 94 chr20 26620066 26620310 -45533572 + L1ME LINE L1 5539 5779 -342 463 274 51 40 chr20 26622280 26622455 -45531427 + MER5B DNA MER1_type 1 177 -1 409 170 53 0 chr20 26622479 26622573 -45531309 - MER5B DNA MER1_type -5 173 75 485 276 135 16 chr20 26623937 26624129 -45529753 - MIR SINE MIR -24 238 24 348 285 100 18 chr20 26624458 26624714 -45529168 - L1MC5 LINE L1 -40 8002 7700 471 245 172 13 chr20 26624714 26624865 -45529017 + MER96 DNA MER1_type 1 175 0 348 285 100 18 chr20 26624865 26624910 -45528972 - L1MC5 LINE L1 -342 7700 7660 2083 92 48 0 chr20 26625409 26625744 -45528138 - AluSx SINE Alu 0 348 1 1460 251 166 10 chr20 26625987 26626488 -45527394 - MLT1G1 LTR MaLR -15 580 2 331 204 0 73 chr20 26626951 26627088 -45526794 + LTR33 LTR ERVL 4 130 -391 735 274 78 24 chr20 26627555 26627938 -45525944 - L1ME LINE L1 -409 5712 5309 672 168 0 0 chr20 26627969 26628082 -45525800 - AluSx SINE Alu 0 310 198 1065 139 0 0 chr20 26628082 26628233 -45525649 - AluSx SINE Alu -162 151 1 1196 105 70 0 chr20 26628459 26628630 -45525252 - AluSg/x SINE Alu -16 296 114 * 1440 89 0 0 chr20 26628629 26628808 -45525074 + AluSx SINE Alu 41 219 -93 664 190 17 0 chr20 26628845 26628961 -45524921 - FLAM_C SINE Alu -15 118 1 1069 95 154 0 chr20 26628970 26629139 -45524743 - L1PB1 LINE L1 0 6151 5957 2219 122 0 0 chr20 26631580 26631876 -45522006 + AluSx SINE Alu 1 296 -16 349 328 167 0 chr20 26631950 26632154 -45521728 - MIR SINE MIR -24 238 1 5684 108 51 2 chr20 26632694 26634295 -45519587 + L1PA11 LINE L1 4492 6174 0 200 317 0 0 chr20 26634350 26634410 -45519472 + L2 LINE L2 2996 3055 -217 947 245 68 34 chr20 26634445 26634771 -45519111 + MER46C DNA MER2_type 1 337 -1 439 339 61 91 chr20 26635363 26635803 -45518079 + L2 LINE L2 2831 3257 -15 468 207 68 44 chr20 26636254 26636376 -45517506 - MIR3 SINE MIR -32 176 49 1829 146 0 39 chr20 26636420 26636728 -45517154 + AluJb SINE Alu 1 296 -16 2215 113 3 3 chr20 26637422 26637724 -45516158 + AluSq SINE Alu 1 302 -11 1496 131 27 5 chr20 26638025 26638247 -45515635 + MER30 DNA MER1_type 4 230 0 3329 241 27 29 chr20 26638412 26639443 -45514439 - L1MC4 LINE L1 -574 7468 6440 2632 52 0 0 chr20 26640019 26640328 -45513554 + AluY SINE Alu 1 309 -2 2030 223 69 37 chr20 26640435 26641074 -45512808 + L1MC4a LINE L1 5149 5297 -849 1647 154 33 30 chr20 26641074 26641373 -45512509 + AluJo SINE Alu 11 310 -2 2030 223 69 37 chr20 26641373 26641484 -45512398 + L1MC4a LINE L1 5297 5403 -743 423 83 0 0 chr20 26641489 26641549 -45512333 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 543 217 91 59 chr20 26641769 26641900 -45511982 + L1MC/D LINE L1 3758 3900 -2246 1702 161 28 14 chr20 26641900 26642191 -45511691 + AluSx SINE Alu 1 295 -17 543 217 91 59 chr20 26642191 26642280 -45511602 + L1MC/D LINE L1 3900 3985 -2161 477 118 82 0 chr20 26642282 26642367 -45511515 + AluSg/x SINE Alu 213 304 -8 2191 216 75 9 chr20 26642379 26643056 -45510826 + L1MC/D LINE L1 3908 4629 -1517 1985 108 4 8 chr20 26643443 26643711 -45510171 + AluSx SINE Alu 32 298 -14 26 30 0 0 chr20 26643857 26643890 -45509992 + AT_rich Low_complexity Low_complexity 1 33 0 303 244 47 71 chr20 26644149 26644276 -45509606 + L1ME1 LINE L1 2456 2579 -3961 443 266 179 0 chr20 26644664 26644837 -45509045 - LTR16A LTR ERVL -6 444 241 2229 92 0 0 chr20 26644853 26645158 -45508724 - AluSg SINE Alu 0 305 1 2830 60 0 11 chr20 26645211 26645578 -45508304 - L1PA7 LINE L1 -4 6150 5788 296 193 23 53 chr20 26645723 26645822 -45508060 - LTR16A1 LTR ERVL -206 244 150 396 301 107 27 chr20 26646309 26646675 -45507207 + L1MC/D LINE L1 5255 5649 -2159 996 194 128 83 chr20 26646686 26647109 -45506773 - L1ME1 LINE L1 -2 6164 5723 533 165 127 32 chr20 26647097 26647255 -45506627 - L1ME1 LINE L1 -983 5163 4991 * 2429 91 0 0 chr20 26647257 26647565 -45506317 - AluSg SINE Alu -2 308 1 2195 222 28 41 chr20 26647573 26648001 -45505881 - L1ME1 LINE L1 -1662 4484 4067 2167 113 10 10 chr20 26648001 26648311 -45505571 - AluSg SINE Alu 0 310 1 2195 222 28 41 chr20 26648311 26648561 -45505321 - L1ME1 LINE L1 -2079 4067 3815 1541 233 102 19 chr20 26648578 26649227 -45504655 + L1ME1 LINE L1 4571 5273 -1267 199 333 60 24 chr20 26649321 26649405 -45504477 + L2 LINE L2 3170 3256 -16 2321 96 0 0 chr20 26649412 26649705 -45504177 + AluSx SINE Alu 1 293 -19 1565 190 19 35 chr20 26650348 26650659 -45503223 + AluJo SINE Alu 6 311 -1 2311 115 0 6 chr20 26650802 26651116 -45502766 - AluSx SINE Alu 0 312 1 560 188 9 0 chr20 26651131 26651243 -45502639 + Tigger5 DNA MER2_type 2211 2323 0 1310 189 180 3 chr20 26651264 26651598 -45502284 - MLT2C1 LTR ERVL -4 393 1 1695 193 55 18 chr20 26653693 26654020 -45499862 + LTR52 LTR ERVL 5 351 -70 249 33 0 0 chr20 26654020 26654050 -45499832 + (TG)n Simple_repeat Simple_repeat 2 31 0 1695 193 55 18 chr20 26654050 26654121 -45499761 + LTR52 LTR ERVL 351 418 -3 23 0 0 0 chr20 26654536 26654559 -45499323 + AT_rich Low_complexity Low_complexity 1 23 0 520 285 109 43 chr20 26654641 26655020 -45498862 + L1ME1 LINE L1 5567 5999 -516 2365 70 0 10 chr20 26655020 26655318 -45498564 - AluY SINE Alu -16 295 1 520 285 109 43 chr20 26655318 26655539 -45498343 + L1ME1 LINE L1 5999 6204 -311 493 231 102 82 chr20 26657405 26657660 -45496222 + L1M4 LINE L1 4787 5046 -1100 485 256 15 0 chr20 26657660 26657797 -45496085 + L1ME1 LINE L1 6414 6552 -8 2026 134 22 0 chr20 26657812 26658114 -45495768 + AluSx SINE Alu 1 308 0 199 245 61 51 chr20 26658164 26658262 -45495620 + MIR SINE MIR 62 160 -102 2478 75 7 0 chr20 26658425 26658732 -45495150 + AluSq SINE Alu 1 309 -4 1447 264 21 35 chr20 26659355 26659875 -45494007 + L1MCb LINE L1 121 633 -5412 1923 191 138 49 chr20 26659997 26660321 -45493561 + L1MCb LINE L1 630 924 -5640 2293 108 0 16 chr20 26660321 26660635 -45493247 + AluSq SINE Alu 1 309 -4 1923 191 138 49 chr20 26660635 26661059 -45492823 + L1MCb LINE L1 924 1309 -5255 2219 113 3 0 chr20 26661059 26661352 -45492530 + AluSx SINE Alu 1 294 -18 1923 191 138 49 chr20 26661352 26661592 -45492290 + L1MCb LINE L1 1309 1729 -4835 229 219 81 65 chr20 26662051 26662174 -45491708 - L1ME LINE L1 -397 5724 5600 627 216 0 9 chr20 26662427 26662543 -45491339 - FLAM_A SINE Alu -17 116 2 273 253 152 20 chr20 26662702 26662801 -45491081 - MIR3 SINE MIR -52 156 45 2577 200 106 35 chr20 26663718 26664230 -45489652 + L1MA5 LINE L1 1258 1732 -5117 1545 117 0 0 chr20 26664230 26664436 -45489446 + AluSg/x SINE Alu 88 293 -19 2577 200 106 35 chr20 26664436 26664689 -45489193 + L1MA5 LINE L1 1732 2094 -4755 949 126 0 161 chr20 26664689 26664919 -45488963 + 7SK RNA RNA 1 193 0 2577 200 106 35 chr20 26664919 26665017 -45488865 + L1MA5 LINE L1 2094 2184 -4665 725 138 0 0 chr20 26665019 26665128 -45488754 + AluJ SINE Alu 1 109 -203 2208 125 128 13 chr20 26665131 26665515 -45488367 + MSTA LTR MaLR 1 428 0 9192 132 13 36 chr20 26665517 26667127 -45486755 + MSTA-int LTR MaLR 3 1575 -5 2089 129 116 35 chr20 26667161 26667557 -45486325 + MSTA LTR MaLR 1 428 0 534 243 181 17 chr20 26667557 26667733 -45486149 + AluJ SINE Alu 108 312 0 518 201 13 19 chr20 26667720 26667887 -45485995 + G-rich Low_complexity Low_complexity 1 165 0 * 676 229 11 11 chr20 26667881 26668066 -45485816 + L1MA5 LINE L1 2143 2319 -4519 966 223 29 24 chr20 26668074 26668211 -45485671 + AluJo SINE Alu 4 141 -171 1604 157 30 11 chr20 26668211 26668479 -45485403 + AluSx SINE Alu 1 273 -39 228 67 0 0 chr20 26668488 26668518 -45485364 + (GGGA)n Simple_repeat Simple_repeat 3 32 0 972 191 0 6 chr20 26668520 26668688 -45485194 + FRAM SINE Alu 1 160 -16 2991 168 34 23 chr20 26668690 26669150 -45484732 + L1MA5 LINE L1 2310 2763 -4085 1607 175 53 0 chr20 26669150 26669256 -45484626 + AluJb SINE Alu 11 110 -202 381 93 0 0 chr20 26669256 26669310 -45484572 + (CA)n Simple_repeat Simple_repeat 1 54 0 1607 175 53 0 chr20 26669310 26669466 -45484416 + AluJb SINE Alu 110 287 -25 2991 168 34 23 chr20 26669466 26670078 -45483804 + L1MA5 LINE L1 2763 3395 -3453 3022 77 3 10 chr20 26670079 26670468 -45483414 - L1PA7 LINE L1 0 6154 5769 955 80 22 0 chr20 26670484 26670621 -45483261 - L1MB3 LINE L1 0 6183 6044 3685 38 0 2 chr20 26670635 26671052 -45482830 - L1PA6 LINE L1 -4 6150 5735 28307 118 15 75 chr20 26671052 26676194 -45477688 - L1P LINE L1 -1303 4843 12 11400 154 63 87 chr20 26676195 26676664 -45477218 + L1MA5 LINE L1 3371 3850 -2998 1015 190 0 77 chr20 26676664 26676885 -45476997 + AluJo SINE Alu 86 289 -23 11400 154 63 87 chr20 26676885 26678922 -45474960 + L1MA5 LINE L1 3850 6032 -816 1986 153 59 28 chr20 26678924 26679315 -45474567 + L1MA5 LINE L1 6600 7002 0 275 244 69 36 chr20 26679429 26679531 -45474351 - MIR SINE MIR -48 160 54 2017 98 84 3 chr20 26679546 26679831 -45474051 - AluSx SINE Alu -4 308 1 471 226 96 92 chr20 26680149 26680287 -45473595 + L1ME LINE L1 5484 5625 -496 1686 191 0 3 chr20 26680287 26680590 -45473292 + AluJo SINE Alu 1 302 -10 471 226 96 92 chr20 26680590 26680712 -45473170 + L1ME LINE L1 5625 5745 -376 274 250 50 0 chr20 26680734 26680843 -45473039 + L1ME LINE L1 5719 5823 -298 1586 147 16 67 chr20 26680843 26681157 -45472725 + AluJo SINE Alu 1 298 -14 274 250 50 0 chr20 26681157 26681170 -45472712 + L1ME LINE L1 5823 5834 -287 1794 188 52 0 chr20 26681482 26681806 -45472076 - MER58B DNA MER1_type 0 341 1 1102 210 84 52 chr20 26681818 26682014 -45471868 + MER33 DNA MER1_type 5 216 -2369 888 126 0 37 chr20 26682014 26682149 -45471733 - FLAM_C SINE Alu -3 130 1 1102 210 84 52 chr20 26682149 26682262 -45471620 + MER33 DNA MER1_type 216 324 0 1734 186 13 0 chr20 26682427 26682733 -45471149 + AluJb SINE Alu 1 310 -2 1976 138 3 3 chr20 26682945 26683235 -45470647 + AluSx SINE Alu 1 290 -22 226 185 0 74 chr20 26683530 26683611 -45470271 - L1MCa LINE L1 -4346 2080 2006 2239 161 97 0 chr20 26683724 26684115 -45469767 - MSTB1 LTR MaLR -3 429 1 329 311 97 15 chr20 26684297 26684493 -45469389 + L3 LINE CR1 1197 1408 -169 2481 61 0 0 chr20 26684515 26684810 -45469072 - AluY SINE Alu 0 311 17 2559 183 13 18 chr20 26686046 26686555 -45467327 + L1MA10 LINE L1 5808 6305 0 492 242 170 7 chr20 26687006 26687159 -45466723 - MLT1K LTR MaLR -14 574 397 574 357 25 37 chr20 26687201 26687430 -45466452 - MLT1K LTR MaLR -269 319 94 9721 69 5 36 chr20 26687430 26689484 -45464398 - L1PA6 LINE L1 0 6154 4128 574 357 25 37 chr20 26689484 26689576 -45464306 - MLT1K LTR MaLR -494 94 2 327 325 101 18 chr20 26689579 26689748 -45464134 - MIR SINE MIR -3 259 77 2130 108 3 30 chr20 26690027 26690332 -45463550 - AluSx SINE Alu -14 298 2 1738 220 65 39 chr20 26690698 26691189 -45462693 - Charlie4a DNA MER1_type 0 508 5 261 256 157 22 chr20 26691245 26691395 -45462487 - MIR SINE MIR -62 146 12 1266 189 88 135 chr20 26692360 26692952 -45460930 + L1MC4 LINE L1 7479 8042 0 22 52 0 35 chr20 26693244 26693273 -45460609 + AT_rich Low_complexity Low_complexity 1 29 -27 1775 156 6 61 chr20 26693273 26693601 -45460281 - AluJo SINE Alu -2 310 1 22 52 0 35 chr20 26693601 26693629 -45460253 + AT_rich Low_complexity Low_complexity 29 56 0 594 278 140 50 chr20 26694138 26694629 -45459253 + L2 LINE L2 2727 3266 -47 247 359 57 9 chr20 26694957 26695063 -45458819 - MIR SINE MIR -61 147 37 3490 128 8 14 chr20 26695716 26696216 -45457666 - LOR1a LTR ERV1 0 497 1 190 244 67 0 chr20 26696454 26696499 -45457383 - MIR SINE MIR -72 136 89 829 243 187 88 chr20 26696692 26697397 -45456485 - HAL1 LINE L1 -261 2246 1472 300 222 25 8 chr20 26697405 26697649 -45456233 + (CATATA)n Simple_repeat Simple_repeat 1 248 0 1309 236 67 36 chr20 26697661 26698090 -45455792 - HAL1 LINE L1 -1071 1436 989 2266 131 0 61 chr20 26698090 26698449 -45455433 + MER1B DNA MER1_type 1 337 0 1309 236 67 36 chr20 26698449 26698515 -45455367 - HAL1 LINE L1 -1518 989 926 474 149 47 47 chr20 26698547 26698654 -45455228 - MER105 DNA DNA -3 201 95 1765 230 148 5 chr20 26698713 26699152 -45454730 + MLT1D LTR MaLR 1 502 -3 1854 278 118 12 chr20 26699157 26699920 -45453962 - HAL1 LINE L1 -1653 854 11 1651 196 10 6 chr20 26699961 26700272 -45453610 - AluJo SINE Alu 0 312 1 222 286 57 67 chr20 26700278 26700383 -45453499 - MIR SINE MIR -70 192 89 619 144 22 44 chr20 26700619 26700800 -45453082 + GA-rich Low_complexity Low_complexity 4 180 0 302 121 0 17 chr20 26700817 26700875 -45453007 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 897 202 165 53 chr20 26701019 26701641 -45452241 + LTR50 LTR ERVL 3 779 -16 7484 112 6 44 chr20 26702555 26703741 -45450141 - L1MA3 LINE L1 -5 6300 5210 2105 133 0 3 chr20 26703741 26704035 -45449847 - AluSx SINE Alu -19 293 1 7484 112 6 44 chr20 26704035 26704665 -45449217 - L1MA3 LINE L1 -1095 5210 4558 2742 235 31 43 chr20 26705121 26705732 -45448150 + L1ME1 LINE L1 5443 6045 -121 441 130 0 0 chr20 26705732 26705801 -45448081 - L1MA9 LINE L1 -5 6307 6239 2742 235 31 43 chr20 26705801 26705907 -45447975 + L1ME1 LINE L1 6045 6151 -15 24 0 0 0 chr20 26705928 26705952 -45447930 + AT_rich Low_complexity Low_complexity 1 24 0 2488 246 107 11 chr20 26705962 26706748 -45447134 + L1MC4 LINE L1 6816 7676 -366 2191 155 14 0 chr20 26706768 26707123 -45446759 + MER47A DNA MER2_type 1 360 -6 536 278 90 45 chr20 26707138 26707426 -45446456 + L1MC4 LINE L1 7722 8022 -20 547 291 53 53 chr20 26707481 26707766 -45446116 + L1ME4a LINE L1 5494 5778 -2030 225 333 136 14 chr20 26707812 26707959 -45445923 + MIR SINE MIR 88 252 -10 308 286 50 64 chr20 26708008 26708291 -45445591 + L1ME4a LINE L1 5836 6114 -7 1579 172 50 7 chr20 26709892 26710171 -45443711 - AluJb SINE Alu -21 291 1 251 277 149 14 chr20 26710224 26710372 -45443510 + MIR3 SINE MIR 12 179 -29 458 297 99 39 chr20 26710499 26710731 -45443151 - MIR SINE MIR 0 262 17 359 328 17 47 chr20 26711260 26711492 -45442390 - L1MC4a LINE L1 -1966 5842 5618 371 21 21 0 chr20 26712054 26712102 -45441780 + (CA)n Simple_repeat Simple_repeat 1 49 0 333 0 0 0 chr20 26712333 26712370 -45441512 + (TG)n Simple_repeat Simple_repeat 2 38 0 3514 40 0 0 chr20 26712392 26712788 -45441094 - L1PA4 LINE L1 0 6155 5760 590 233 103 27 chr20 26713001 26713224 -45440658 + MER5C DNA MER1_type 3 242 -82 904 191 17 0 chr20 26713224 26713402 -45440480 - AluJo SINE Alu -10 302 122 943 229 123 108 chr20 26714013 26714598 -45439284 - MLT1G1 LTR MaLR 0 595 2 186 208 0 0 chr20 26715353 26715401 -45438481 + (TG)n Simple_repeat Simple_repeat 1 48 0 281 272 0 44 chr20 26715421 26715535 -45438347 + (TG)n Simple_repeat Simple_repeat 1 109 0 289 250 0 24 chr20 26715547 26715711 -45438171 + (TATG)n Simple_repeat Simple_repeat 4 163 0 202 220 70 5 chr20 26715856 26715941 -45437941 - MIR SINE MIR -95 113 17 1177 297 68 69 chr20 26717779 26718897 -45434985 + HAL1 LINE L1 816 1932 -575 1490 177 115 10 chr20 26718958 26719263 -45434619 - MER44D DNA MER2_type -1 608 2 1123 100 0 18 chr20 26719694 26719852 -45434030 + L1P LINE L1 3323 3479 -2667 5079 59 7 0 chr20 26719852 26720464 -45433418 + L1PA8 LINE L1 5555 6170 -2 1123 100 0 18 chr20 26720464 26720475 -45433407 + L1P LINE L1 3479 3489 -2657 678 253 31 0 chr20 26720552 26720714 -45433168 - LTR16C LTR ERVL -2 489 323 272 281 31 10 chr20 26720741 26720837 -45433045 - LTR16C LTR ERVL -383 108 11 238 196 0 0 chr20 26721301 26721347 -45432535 + L2 LINE L2 3268 3313 0 693 251 177 79 chr20 26721521 26721939 -45431943 - LTR16C LTR ERVL -32 459 1 257 310 77 10 chr20 26721974 26722100 -45431782 - L2 LINE L2 -349 2923 2791 328 337 89 37 chr20 26723049 26723111 -45430771 - MIR SINE MIR 0 262 205 1720 259 109 45 chr20 26723111 26723374 -45430508 - MLT1G1 LTR MaLR 0 595 350 2234 100 40 3 chr20 26723374 26723673 -45430209 - AluSg SINE Alu 0 310 1 1720 259 109 45 chr20 26723673 26723968 -45429914 - MLT1G1 LTR MaLR -245 350 1 328 337 89 37 chr20 26723968 26724151 -45429731 - MIR SINE MIR -57 205 4 334 261 33 72 chr20 26724202 26724355 -45429527 + MIR SINE MIR 61 207 -55 228 265 51 10 chr20 26724484 26724582 -45429300 - MLT1J LTR MaLR 0 511 410 343 285 33 98 chr20 26724802 26725076 -45428806 + MER112 DNA MER1_type 4 259 -1 755 148 0 70 chr20 26725077 26725132 -45428750 + FLAM_A SINE Alu 1 58 -253 3141 137 26 26 chr20 26725132 26725628 -45428254 + LOR1a LTR ERV1 2 497 0 755 148 0 70 chr20 26725628 26725888 -45427994 + FLAM_A SINE Alu 58 142 -169 2976 276 83 42 chr20 26726086 26727124 -45426758 + HAL1 LINE L1 2 1161 -1346 1118 162 0 22 chr20 26727124 26727303 -45426579 + FAM SINE Alu 1 175 0 2976 276 83 42 chr20 26727303 26727879 -45426003 + HAL1 LINE L1 1161 1712 -795 347 275 70 79 chr20 26728150 26728379 -45425503 + HAL1 LINE L1 1721 1947 -560 879 210 194 46 chr20 26728442 26728858 -45425024 + MER66A LTR ERV1 96 478 0 678 266 122 42 chr20 26728881 26729235 -45424647 + HAL1 LINE L1 1976 2357 -150 287 286 36 64 chr20 26729296 26729436 -45424446 + HAL1 LINE L1 2360 2495 -12 26 30 0 0 chr20 26729473 26729506 -45424376 + AT_rich Low_complexity Low_complexity 1 33 0 243 355 116 0 chr20 26730281 26730436 -45423446 + MIR SINE MIR 77 249 -13 619 289 62 8 chr20 26730603 26730845 -45423037 + MIR SINE MIR 5 259 -3 255 301 126 10 chr20 26731161 26731264 -45422618 + MIR SINE MIR 36 150 -58 1025 314 41 22 chr20 26731282 26731821 -45422061 + L1M4 LINE L1 4110 4658 -1488 453 256 280 0 chr20 26731824 26731992 -45421890 + MER20 DNA MER1_type 4 218 -1 330 236 89 58 chr20 26731993 26732184 -45421698 + L1M4 LINE L1 4651 4847 -1299 484 225 39 39 chr20 26732198 26732352 -45421530 + MIR SINE MIR 63 218 -44 1825 174 0 7 chr20 26732400 26732694 -45421188 + AluJb SINE Alu 1 292 -20 754 229 60 20 chr20 26732846 26733047 -45420835 - MER3 DNA MER1_type 0 209 1 25 31 0 0 chr20 26733232 26733264 -45420618 + AT_rich Low_complexity Low_complexity 1 32 0 1799 184 23 0 chr20 26733304 26733609 -45420273 + AluJo SINE Alu 1 312 0 377 341 0 0 chr20 26734515 26734647 -45419235 - MIR SINE MIR -126 136 5 24 0 0 0 chr20 26735067 26735091 -45418791 + AT_rich Low_complexity Low_complexity 1 24 0 1474 168 55 52 chr20 26735557 26735594 -45418288 + AluJb SINE Alu 1 36 -276 2274 93 3 16 chr20 26735594 26735904 -45417978 - AluSq SINE Alu -7 306 1 1474 168 55 52 chr20 26735904 26736157 -45417725 + AluJb SINE Alu 36 292 -20 1147 196 38 0 chr20 26736176 26736385 -45417497 - MER20 DNA MER1_type -2 217 1 25 0 0 0 chr20 26736511 26736536 -45417346 + AT_rich Low_complexity Low_complexity 1 25 0 1414 118 5 9 chr20 26736536 26736756 -45417126 + L1MA6 LINE L1 6082 6300 0 661 251 240 3 chr20 26737740 26738023 -45415859 + LTR16C LTR ERVL 142 491 0 1052 224 32 16 chr20 26738754 26739000 -45414882 + L1ME1 LINE L1 5913 6162 -4 227 325 13 26 chr20 26739239 26739316 -45414566 + MIR SINE MIR 20 95 -167 352 238 89 0 chr20 26739318 26739419 -45414463 - MLT1J LTR MaLR -333 178 69 268 290 122 30 chr20 26742003 26742134 -45411748 - L2 LINE L2 0 3313 3171 720 297 181 41 chr20 26742274 26742753 -45411129 - L2 LINE L2 -337 2977 2566 2360 125 57 40 chr20 26742753 26743178 -45410704 + MSTB1 LTR MaLR 1 432 0 720 297 181 41 chr20 26743178 26743858 -45410024 - L2 LINE L2 -748 2566 1656 214 363 27 41 chr20 26744711 26744857 -45409025 + MIR SINE MIR 119 262 0 347 237 13 118 chr20 26745922 26746074 -45407808 + Charlie8 DNA MER1_type 38 173 -2244 2711 248 32 17 chr20 26746461 26747093 -45406789 - MER82 DNA MER2_type -4 649 9 225 263 12 75 chr20 26747643 26747723 -45406159 - MER91 DNA MER1_type 0 140 66 747 0 0 0 chr20 26748152 26748235 -45405647 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 192 354 37 0 chr20 26748489 26748571 -45405311 + MIR SINE MIR 107 191 -71 1220 179 115 8 chr20 26748782 26749016 -45404866 + AluJo SINE Alu 1 259 -53 755 292 140 22 chr20 26750175 26750682 -45403200 + L1MC4a LINE L1 5381 5947 -1861 1783 159 51 0 chr20 26751440 26751736 -45402146 + AluJo SINE Alu 1 311 -1 30 45 0 0 chr20 26751831 26751875 -45402007 + AT_rich Low_complexity Low_complexity 1 44 0 272 272 35 18 chr20 26751875 26752044 -45401838 + (TA)n Simple_repeat Simple_repeat 2 173 0 994 261 81 22 chr20 26752865 26753077 -45400805 + MER20B DNA MER1_type 364 607 -176 333 0 0 0 chr20 26753077 26753114 -45400768 + (TG)n Simple_repeat Simple_repeat 2 38 0 994 261 81 22 chr20 26753114 26753258 -45400624 + MER20B DNA MER1_type 607 741 -42 353 233 14 0 chr20 26753336 26753409 -45400473 - MER5B DNA MER1_type 0 178 105 424 215 21 11 chr20 26753516 26753609 -45400273 - MER5B DNA MER1_type -83 95 2 505 296 15 0 chr20 26753654 26753789 -45400093 + MER5A DNA MER1_type 1 137 -52 1966 135 0 30 chr20 26755036 26755340 -45398542 + AluSx SINE Alu 1 295 -17 286 262 0 29 chr20 26755351 26755454 -45398428 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 25 0 0 0 chr20 26755646 26755671 -45398211 + AT_rich Low_complexity Low_complexity 1 25 0 266 288 75 12 chr20 26756284 26756364 -45397518 + L2 LINE L2 3229 3313 0 393 341 82 19 chr20 26756397 26756605 -45397277 - MIR SINE MIR -16 246 26 3084 278 113 25 chr20 26756825 26758548 -45395334 + L1ME3A LINE L1 3543 5424 -746 501 229 8 8 chr20 26758557 26758675 -45395207 + L1ME3A LINE L1 5711 5828 -342 1405 102 6 0 chr20 26758696 26758873 -45395009 - AluSx SINE Alu -134 178 1 310 227 0 0 chr20 26758989 26759055 -45394827 - MIR SINE MIR -34 228 163 2234 237 49 28 chr20 26759066 26759737 -45394145 + MER97b DNA MER1_type? 41 725 -328 633 290 88 37 chr20 26760163 26760624 -45393258 + MLT1H LTR MaLR 21 544 -5 815 30 0 0 chr20 26760640 26760739 -45393143 + AluYa5/8 SINE Alu 213 311 0 335 240 182 47 chr20 26762741 26762933 -45390949 + MER112 DNA MER1_type 1 218 -42 543 294 76 17 chr20 26763393 26763631 -45390251 + MIR SINE MIR 4 255 -7 234 0 0 0 chr20 26764375 26764401 -45389481 + (TG)n Simple_repeat Simple_repeat 2 27 0 254 368 75 26 chr20 26764947 26765213 -45388669 + L2 LINE L2 2563 2841 -473 7730 206 23 100 chr20 26765385 26765879 -45388003 + L1M4 LINE L1 2516 3046 -3100 1943 145 0 21 chr20 26765879 26766196 -45387686 + AluSx SINE Alu 1 311 0 7730 206 23 100 chr20 26766196 26767118 -45386764 + L1M4 LINE L1 3046 4037 -2109 480 120 40 10 chr20 26767118 26767218 -45386664 + Charlie5 DNA MER1_type 2428 2530 -82 2326 12 0 0 chr20 26767224 26767477 -45386405 + AluYa5 SINE Alu 45 297 -14 7730 206 23 100 chr20 26767477 26768093 -45385789 + L1M4 LINE L1 4042 4411 -1735 2210 123 3 0 chr20 26768093 26768402 -45385480 + AluSx SINE Alu 1 310 -2 7730 206 23 100 chr20 26768402 26768938 -45384944 + L1M4 LINE L1 4411 4987 -1159 773 234 5 5 chr20 26768944 26769136 -45384746 + L1MB4 LINE L1 6 197 -6666 * 9220 192 42 23 chr20 26769133 26772068 -45381814 + L1MB4 LINE L1 1392 4377 -2485 3387 133 72 0 chr20 26772068 26772585 -45381297 + MER41C LTR ERV1 1 554 0 7049 74 26 0 chr20 26772672 26773576 -45380306 + MER41C-int LTR ERV1 3 930 -6826 * 12500 83 28 2 chr20 26773568 26775218 -45378664 + MER41C-int LTR ERV1 1363 3055 -4701 15775 67 14 1 chr20 26775218 26777190 -45376692 + MER41C-int LTR ERV1 4399 6395 -1361 3853 84 39 13 chr20 26777186 26777721 -45376161 + MER41C-int LTR ERV1 7208 7756 0 * 3416 131 65 0 chr20 26777721 26778241 -45375641 + MER41C LTR ERV1 1 554 0 8221 184 25 20 chr20 26778410 26780219 -45373663 + L1MB4 LINE L1 4372 6202 -694 288 0 0 0 chr20 26780219 26780251 -45373631 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 8221 184 25 20 chr20 26780251 26780950 -45372932 + L1MB4 LINE L1 6202 6896 0 22 0 0 0 chr20 26781309 26781331 -45372551 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr20 26781349 26781383 -45372499 + AT_rich Low_complexity Low_complexity 1 34 0 230 293 108 36 chr20 26781404 26781626 -45372256 + L1ME LINE L1 5527 5764 -357 186 200 0 0 chr20 26782125 26782165 -45371717 - L2 LINE L2 -4 3309 3270 225 241 127 0 chr20 26782250 26782329 -45371553 - MIR SINE MIR -87 175 87 28 86 0 0 chr20 26783212 26783282 -45370600 + AT_rich Low_complexity Low_complexity 1 70 0 2270 287 132 36 chr20 26783336 26784819 -45369063 - L2 LINE L2 -251 3062 1429 1796 153 39 11 chr20 26784819 26785100 -45368782 - AluJo SINE Alu -23 289 1 2270 287 132 36 chr20 26785100 26785192 -45368690 - L2 LINE L2 -1884 1429 1347 1784 168 73 68 chr20 26785192 26785710 -45368172 - Charlie1b DNA MER1_type -2 521 1 192 271 0 21 chr20 26785736 26785784 -45368098 - MIR SINE MIR -135 73 27 2175 104 16 13 chr20 26787190 26787498 -45366384 + AluSx SINE Alu 1 309 -3 521 321 113 0 chr20 26787759 26787971 -45365911 - MIR SINE MIR -16 246 11 334 290 80 35 chr20 26788004 26788338 -45365544 - L1ME LINE L1 -297 5824 5417 2490 90 0 0 chr20 26788732 26789043 -45364839 + AluY SINE Alu 1 311 0 801 284 107 12 chr20 26789616 26790017 -45363865 - LTR16A LTR ERVL -11 439 1 375 305 96 40 chr20 26790291 26790468 -45363414 - MER45C DNA AcHobo -441 512 326 694 259 81 25 chr20 26790540 26790776 -45363106 - MER45C DNA AcHobo -651 302 54 2502 68 0 0 chr20 26791340 26791649 -45362233 + AluY SINE Alu 1 309 -2 431 234 0 4 chr20 26791895 26792129 -45361753 + (CA)n Simple_repeat Simple_repeat 1 232 0 1458 196 21 11 chr20 26792220 26792505 -45361377 - AluJb SINE Alu -18 294 7 1417 178 30 0 chr20 26793450 26793686 -45360196 - AluJb SINE Alu -12 300 58 207 336 39 16 chr20 26793694 26793822 -45360060 + MIR SINE MIR 65 195 -67 2422 229 48 12 chr20 26794595 26795157 -45358725 - MLT1G LTR MaLR -1 589 8 2097 133 0 3 chr20 26795757 26796057 -45357825 + AluSg SINE Alu 1 299 -11 1579 238 90 0 chr20 26796135 26796547 -45357335 + MLT1G LTR MaLR 125 573 -17 324 48 0 0 chr20 26796902 26796944 -45356938 + (CA)n Simple_repeat Simple_repeat 1 42 0 798 191 27 33 chr20 26798216 26798399 -45355483 - MIR SINE MIR -60 202 21 721 177 8 8 chr20 26798658 26798788 -45355094 + FLAM_C SINE Alu 2 131 -2 492 184 60 1 chr20 26798845 26798972 -45354910 + L1ME1 LINE L1 6027 6162 -2 244 233 78 60 chr20 26799767 26799883 -45353999 - L1MC4 LINE L1 -1 8041 7924 1931 198 3 27 chr20 26799951 26800319 -45353563 - MLT1A1 LTR MaLR -1 364 6 757 245 10 25 chr20 26800410 26800614 -45353268 - L1ME2 LINE L1 -20 6144 5944 322 229 16 0 chr20 26800678 26800739 -45353143 + Tigger3(Golem) DNA MER2_type 1 62 -2967 733 81 0 0 chr20 26800914 26801013 -45352869 + AluY SINE Alu 211 309 -2 242 178 14 0 chr20 26801123 26801138 -45352744 + A-rich Low_complexity Low_complexity 1 14 -60 2232 128 0 3 chr20 26801138 26801451 -45352431 + AluSx SINE Alu 1 312 0 242 178 14 0 chr20 26801451 26801508 -45352374 + A-rich Low_complexity Low_complexity 14 74 0 236 293 41 61 chr20 26801699 26801846 -45352036 - MIR SINE MIR -67 195 52 296 282 27 27 chr20 26805170 26805280 -45348602 - MIR SINE MIR -80 128 19 547 297 51 25 chr20 26805891 26806127 -45347755 + MIR SINE MIR 6 247 -15 21 36 0 0 chr20 26806620 26806648 -45347234 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 26807477 26807499 -45346383 + AT_rich Low_complexity Low_complexity 1 22 0 1985 111 93 0 chr20 26807774 26808044 -45345838 - AluSx SINE Alu -17 295 1 1136 240 37 58 chr20 26808640 26809124 -45344758 - L1MC5 LINE L1 -178 7783 7310 880 180 0 55 chr20 26809218 26809401 -45344481 + FRAM SINE Alu 2 174 -2 675 281 138 30 chr20 26810100 26810763 -45343119 + L1MC4a LINE L1 4957 5681 -748 465 274 68 17 chr20 26810784 26811018 -45342864 + L1MC4a LINE L1 5763 6008 -1800 232 257 46 64 chr20 26811023 26811132 -45342750 + L1MC4a LINE L1 6069 6175 -1633 2072 121 24 0 chr20 26811140 26811430 -45342452 + AluSx SINE Alu 1 297 -15 491 321 36 0 chr20 26813709 26813905 -45339977 - MIR SINE MIR -1 261 59 562 265 185 12 chr20 26815348 26815673 -45338209 - LTR16A LTR ERVL -47 403 23 2303 92 3 0 chr20 26816632 26816924 -45336958 + AluSp SINE Alu 1 293 -20 1757 161 39 0 chr20 26816969 26817249 -45336633 + AluJb SINE Alu 1 291 -21 297 0 0 0 chr20 26817597 26817630 -45336252 + (CA)n Simple_repeat Simple_repeat 2 34 0 768 229 0 6 chr20 26819809 26819984 -45333898 + MER5B DNA MER1_type 5 178 0 306 73 0 0 chr20 26820340 26820381 -45333501 + (TATG)n Simple_repeat Simple_repeat 2 42 0 396 0 0 0 chr20 26826276 26826320 -45327562 + (TG)n Simple_repeat Simple_repeat 2 45 0 24 0 0 0 chr20 26832409 26832433 -45321449 + AT_rich Low_complexity Low_complexity 1 24 0 23 97 0 0 chr20 26833044 26833116 -45320766 + AT_rich Low_complexity Low_complexity 1 72 0 261 0 0 0 chr20 26834216 26834245 -45319637 + (TG)n Simple_repeat Simple_repeat 2 30 0 217 233 12 12 chr20 26835737 26835823 -45318059 + CT-rich Low_complexity Low_complexity 1 86 0 183 42 0 0 chr20 26836613 26836637 -45317245 + (CAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr20 26837340 26837362 -45316520 + AT_rich Low_complexity Low_complexity 1 22 0 243 61 0 0 chr20 26839824 26839857 -45314025 + (T)n Simple_repeat Simple_repeat 1 33 0 183 156 0 0 chr20 26840765 26840797 -45313085 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1898 146 3 47 chr20 26840986 26841308 -45312574 + AluJo SINE Alu 1 308 -4 493 263 75 28 chr20 26841743 26841956 -45311926 + MIR SINE MIR 40 262 0 299 96 84 0 chr20 26842041 26842124 -45311758 + (TA)n Simple_repeat Simple_repeat 1 90 0 356 211 11 42 chr20 26842124 26842219 -45311663 + L1MC4 LINE L1 6612 6703 -1339 568 110 82 0 chr20 26842232 26842539 -45311343 + (TA)n Simple_repeat Simple_repeat 1 332 0 1865 149 0 43 chr20 26842557 26842858 -45311024 - AluJo SINE Alu -24 288 1 507 300 109 22 chr20 26845101 26845331 -45308551 - MIR SINE MIR 0 262 13 1547 247 58 41 chr20 26845523 26846061 -45307821 - MLT1H LTR MaLR 0 549 3 25 0 0 0 chr20 26846461 26846486 -45307396 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr20 26846789 26846811 -45307071 + AT_rich Low_complexity Low_complexity 1 22 0 2519 128 18 54 chr20 26847043 26847487 -45306395 - MSTC LTR MaLR 0 428 1 336 324 36 7 chr20 26847546 26847685 -45306197 + MIR SINE MIR 2 144 -118 748 171 171 0 chr20 26848091 26848243 -45305639 + MER45A DNA AcHobo 1 178 0 2483 63 0 7 chr20 26848882 26849183 -45304699 - AluY SINE Alu -12 299 1 863 184 101 75 chr20 26849371 26849649 -45304233 + LTR12 LTR ERV1 1 285 -429 286 200 0 40 chr20 26849650 26849725 -45304157 + LTR30 LTR ERV1 553 624 -98 655 150 25 33 chr20 26849725 26849845 -45304037 + LTR12 LTR ERV1 362 480 -234 287 241 230 33 chr20 26849848 26850118 -45303764 - LTR16A LTR ERVL -66 384 62 1078 224 36 0 chr20 26851285 26851508 -45302374 + L1PA16 LINE L1 5912 6142 -24 1250 216 77 26 chr20 26852063 26852414 -45301468 + MLT1C LTR MaLR 9 377 -90 220 330 52 35 chr20 26852543 26852658 -45301224 + L2 LINE L2 3195 3311 -2 240 86 0 0 chr20 26853185 26853220 -45300662 + (CA)n Simple_repeat Simple_repeat 1 35 0 1879 223 44 52 chr20 26853270 26853848 -45300034 - L1MC4 LINE L1 0 7854 7307 1894 176 19 80 chr20 26853848 26854025 -45299857 + MLT1B LTR MaLR 1 187 -203 2025 150 7 3 chr20 26854025 26854331 -45299551 + AluSx SINE Alu 2 308 -4 1894 176 19 80 chr20 26854331 26854568 -45299314 + MLT1B LTR MaLR 187 390 0 1879 223 44 52 chr20 26854568 26854748 -45299134 - L1MC4 LINE L1 -547 7307 7127 15598 168 59 12 chr20 26854793 26860725 -45293157 - L1PB1 LINE L1 -2 6865 637 1030 175 31 0 chr20 26860728 26860922 -45292960 - L1PB1 LINE L1 -6663 200 1 254 153 28 111 chr20 26860928 26861000 -45292882 - L1MC4a LINE L1 -673 7135 7070 * 1494 245 118 41 chr20 26860987 26861747 -45292135 - L1ME3A LINE L1 -5 6559 5741 1853 143 7 24 chr20 26861811 26862098 -45291784 - AluJb SINE Alu -30 282 1 231 204 0 0 chr20 26862098 26862152 -45291730 - L1ME3A LINE L1 -2453 5726 5673 651 254 48 96 chr20 26862155 26862674 -45291208 - L1ME3A LINE L1 -4276 2445 1952 678 257 95 70 chr20 26864032 26864168 -45289714 - L1ME3A LINE L1 -4619 1921 1790 1958 132 102 9 chr20 26864168 26864501 -45289381 - THE1B LTR MaLR 0 364 1 678 257 95 70 chr20 26864501 26864847 -45289035 - L1ME3A LINE L1 -4750 1790 1427 2582 63 0 3 chr20 26864876 26865179 -45288703 + AluY SINE Alu 3 304 -7 574 244 95 18 chr20 26865205 26865426 -45288456 - L1M4 LINE L1 -1410 4736 4499 3670 121 21 68 chr20 26865426 26865714 -45288168 - Tigger3b DNA MER2_type -1798 1230 930 2164 136 62 45 chr20 26865714 26866133 -45287749 - MSTB LTR MaLR 0 426 1 3670 121 21 68 chr20 26866133 26866523 -45287359 - Tigger3b DNA MER2_type -2098 930 584 33207 73 5 5 chr20 26866525 26871925 -45281957 - L1PA6 LINE L1 -14 6140 753 2499 148 78 24 chr20 26871926 26872386 -45281496 - Tigger3b DNA MER2_type -745 486 2 1273 279 98 26 chr20 26872387 26873225 -45280657 - L1M4 LINE L1 -1645 4501 3604 621 165 0 29 chr20 26873228 26873331 -45280551 - Tigger3(Golem) DNA MER2_type -2929 100 1 238 228 51 0 chr20 26873331 26873410 -45280472 - L1M4 LINE L1 -1645 4999 4917 501 96 70 185 chr20 26873414 26873571 -45280311 + Tigger3b DNA MER2_type 238 376 -855 1059 267 67 46 chr20 26873703 26874329 -45279553 - L1M4 LINE L1 -2938 3706 3068 505 275 145 40 chr20 26874341 26874941 -45278941 - L1M4 LINE L1 -4850 1692 1030 1830 141 0 28 chr20 26875531 26875821 -45278061 + AluJb SINE Alu 1 282 -30 279 330 94 0 chr20 26875853 26875959 -45277923 - MIR SINE MIR -63 145 30 195 42 0 0 chr20 26876476 26876500 -45277382 + (A)n Simple_repeat Simple_repeat 1 24 0 2617 128 27 52 chr20 26877338 26877783 -45276099 - Tigger2a DNA MER2_type 0 434 1 1145 243 10 21 chr20 26879734 26880022 -45273860 + MLT1F LTR MaLR 8 292 -250 336 271 31 0 chr20 26880024 26880120 -45273762 + MIR SINE MIR 113 211 -51 432 310 27 16 chr20 26880126 26880313 -45273569 - L1ME4a LINE L1 -285 5836 5648 1373 214 49 83 chr20 26881386 26881771 -45272111 - L1ME3 LINE L1 -1 6161 5791 1920 117 9 77 chr20 26881771 26882097 -45271785 + AluSc SINE Alu 1 304 -5 1373 214 49 83 chr20 26882097 26882142 -45271740 - L1ME3 LINE L1 -371 5791 5746 1284 211 5 0 chr20 26883612 26883835 -45270047 + MER58A DNA MER1_type 1 224 0 221 378 58 16 chr20 26884027 26884215 -45269667 - L2 LINE L2 -222 3050 2855 2699 210 30 16 chr20 26884314 26884871 -45269011 + MLT1F1 LTR MaLR 1 565 -2 265 307 89 0 chr20 26885226 26885327 -45268555 - MIR SINE MIR -118 144 35 197 65 32 0 chr20 26885685 26885716 -45268166 + (CA)n Simple_repeat Simple_repeat 2 33 0 2486 100 0 3 chr20 26885841 26886172 -45267710 - L1PB1 LINE L1 0 6151 5822 662 154 0 0 chr20 26887208 26887299 -45266583 + AluSg/x SINE Alu 190 280 -30 183 80 0 0 chr20 26887307 26887332 -45266550 + (TATATG)n Simple_repeat Simple_repeat 2 26 0 247 211 19 0 chr20 26887490 26887542 -45266340 + MIR SINE MIR 108 160 -102 396 294 114 43 chr20 26888088 26888272 -45265610 - MIR3 SINE MIR -7 201 5 532 141 7 74 chr20 26889020 26889155 -45264727 + L1MB2 LINE L1 6044 6169 -2 813 229 11 90 chr20 26889165 26889432 -45264450 + MLT1J LTR MaLR 208 453 -58 651 261 103 0 chr20 26889571 26889736 -45264146 + MER5A DNA MER1_type 7 188 -1 491 321 14 24 chr20 26889766 26889978 -45263904 + MIR SINE MIR 4 213 -49 686 328 38 0 chr20 26890195 26890433 -45263449 - MIR SINE MIR -1 261 15 705 259 149 19 chr20 26890567 26890883 -45262999 - LTR16C LTR ERVL 0 491 135 21 0 0 0 chr20 26890894 26890915 -45262967 + AT_rich Low_complexity Low_complexity 1 21 0 655 242 39 39 chr20 26890962 26891144 -45262738 - MER5A DNA MER1_type 0 189 8 180 0 0 0 chr20 26891431 26891451 -45262431 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 31 0 0 0 chr20 26892102 26892133 -45261749 + AT_rich Low_complexity Low_complexity 1 31 0 4430 118 22 6 chr20 26892957 26893637 -45260245 - L1MA5A LINE L1 -23 6274 5584 1608 231 79 25 chr20 26894140 26894620 -45259262 + L1ME1 LINE L1 5596 6101 -65 21 0 0 0 chr20 26894622 26894643 -45259239 + AT_rich Low_complexity Low_complexity 1 21 0 208 343 180 13 chr20 26894998 26895237 -45258645 - L3 LINE CR1 -659 918 640 302 321 68 34 chr20 26895280 26895489 -45258393 + L1ME2 LINE L1 5471 5692 -429 2337 139 16 22 chr20 26895489 26895855 -45258027 - THE1B LTR MaLR 0 364 1 302 321 68 34 chr20 26895855 26895910 -45257972 + L1ME2 LINE L1 5692 5744 -377 643 274 146 5 chr20 26895939 26896158 -45257724 - MIR SINE MIR -1 261 12 225 169 22 45 chr20 26896545 26896634 -45257248 + (TTATA)n Simple_repeat Simple_repeat 3 89 0 1658 109 0 0 chr20 26897040 26897261 -45256621 + L1PA8 LINE L1 5950 6170 -2 571 325 126 32 chr20 26898249 26899032 -45254850 - L2 LINE L2 -4 3309 2446 1493 231 59 0 chr20 26899070 26899476 -45254406 + L1ME2 LINE L1 5726 6155 -9 982 256 108 23 chr20 26900764 26901201 -45252681 + LTR16C LTR ERVL 9 482 -9 1386 224 58 3 chr20 26902719 26903063 -45250819 + MLT1A1 LTR MaLR 2 364 -1 262 233 30 60 chr20 26903251 26903384 -45250498 + LTR16C LTR ERVL 352 480 -11 272 281 0 0 chr20 26904288 26904352 -45249530 - L2 LINE L2 -3 3310 3247 1768 184 106 16 chr20 26905811 26906137 -45247745 + MLT2D LTR ERVL 3 369 -45 417 39 0 0 chr20 26906137 26906188 -45247694 + (TC)n Simple_repeat Simple_repeat 2 52 0 1768 184 106 16 chr20 26906188 26906237 -45247645 + MLT2D LTR ERVL 369 412 -2 303 345 8 0 chr20 26907113 26907232 -45246650 + L1ME LINE L1 5599 5718 -452 2098 143 3 0 chr20 26907874 26908175 -45245707 + AluJb SINE Alu 1 302 -10 230 244 12 0 chr20 26908486 26908568 -45245314 + (CA)n Simple_repeat Simple_repeat 2 84 0 300 137 0 0 chr20 26908625 26908676 -45245206 + (CA)n Simple_repeat Simple_repeat 2 52 0 348 324 38 43 chr20 26909139 26909324 -45244558 - MLT1I LTR MaLR -124 285 102 3802 53 0 5 chr20 26910096 26910545 -45243337 - L1PA8 LINE L1 -6 6166 5720 928 57 0 0 chr20 26910545 26910667 -45243215 + L1P LINE L1 5099 5220 -926 350 253 47 26 chr20 26910674 26910795 -45243087 - L1MC/D LINE L1 -486 5635 5533 1414 188 7 52 chr20 26912221 26912530 -45241352 - LTR1 LTR ERV1 -490 295 1 183 346 0 0 chr20 26913373 26913425 -45240457 - MIR3 SINE MIR -14 194 143 887 143 0 11 chr20 26914004 26914186 -45239696 + (CA)n Simple_repeat Simple_repeat 1 180 0 203 308 0 0 chr20 26914308 26914360 -45239522 - MIR3 SINE MIR -14 194 143 1298 232 63 36 chr20 26914751 26915113 -45238769 - MLT1A2 LTR MaLR 0 374 3 422 276 113 64 chr20 26915275 26915699 -45238183 + L2 LINE L2 2741 3217 -96 2143 129 47 19 chr20 26915699 26916064 -45237818 - THE1C LTR MaLR 0 375 1 422 276 113 64 chr20 26916064 26916166 -45237716 + L2 LINE L2 3217 3313 0 1034 209 164 0 chr20 26916920 26917188 -45236694 + LTR16C LTR ERVL 180 491 0 900 175 42 21 chr20 26917408 26917621 -45236261 - AluJb SINE Alu 0 312 107 966 216 62 0 chr20 26918147 26918355 -45235527 - MIR SINE MIR -40 222 2 203 56 56 0 chr20 26919325 26919361 -45234521 + T-rich Low_complexity Low_complexity 3 40 0 438 266 76 43 chr20 26919543 26919727 -45234155 + MIR SINE MIR 20 209 -53 224 246 200 0 chr20 26919795 26919860 -45234022 + L2 LINE L2 3147 3224 -48 479 259 38 15 chr20 26920694 26920825 -45233057 + MLT1H LTR MaLR 97 230 -319 560 319 65 13 chr20 26922070 26922299 -45231583 - MIR SINE MIR -10 252 12 313 218 57 21 chr20 26922580 26922798 -45231084 + L1MC5 LINE L1 7638 7915 -46 2407 85 0 13 chr20 26923899 26924216 -45229666 + AluSq SINE Alu 1 313 0 3090 116 53 6 chr20 26924803 26925291 -45228591 + L1PB3 LINE L1 5637 6148 -2 261 0 0 0 chr20 26925291 26925320 -45228562 + (TA)n Simple_repeat Simple_repeat 1 29 0 22 35 0 0 chr20 26925724 26925753 -45228129 + AT_rich Low_complexity Low_complexity 1 29 0 207 146 0 0 chr20 26926459 26926500 -45227382 + (CA)n Simple_repeat Simple_repeat 2 42 0 2181 70 0 7 chr20 26926950 26927221 -45226661 + AluY SINE Alu 35 303 -8 962 296 36 24 chr20 26927261 26927797 -45226085 + L1MEc LINE L1 2166 2662 -3553 476 314 58 0 chr20 26928002 26928327 -45225555 + L1MEc LINE L1 3027 3370 -2845 708 311 98 30 chr20 26928463 26929406 -45224476 + L1MEc LINE L1 3579 4585 -1630 305 204 19 0 chr20 26929416 26929470 -45224412 + MER69 DNA AcHobo 1 55 -2471 738 271 112 20 chr20 26929491 26929551 -45224331 - MLT1J2 LTR MaLR -118 332 279 2568 211 71 4 chr20 26929551 26930059 -45223823 - MLT1F LTR MaLR 0 542 1 738 271 112 20 chr20 26930059 26930249 -45223633 - MLT1J2 LTR MaLR -171 279 59 214 320 33 60 chr20 26930558 26930708 -45223174 - L2 LINE L2 -181 3091 2946 207 100 0 0 chr20 26931309 26931339 -45222543 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 467 281 16 18 chr20 26931782 26931989 -45221893 + MIR SINE MIR 1 261 -1 279 264 285 14 chr20 26932091 26932235 -45221647 - MIR SINE MIR -60 202 20 618 201 50 25 chr20 26932757 26932916 -45220966 + MER103 DNA DNA 3 165 -1 1091 255 55 36 chr20 26933962 26934346 -45219536 - LTR16C LTR ERVL -2 489 99 185 140 380 0 chr20 26935504 26935554 -45218328 + MIR SINE MIR 122 190 -72 572 272 115 39 chr20 26935672 26936062 -45217820 - MLT2F LTR ERVL -5 658 239 308 244 174 26 chr20 26936099 26936214 -45217668 - MLT2F LTR ERVL -531 132 1 21 36 0 0 chr20 26936991 26937019 -45216863 + AT_rich Low_complexity Low_complexity 1 28 0 5246 146 16 44 chr20 26937060 26937905 -45215977 + L1PB4 LINE L1 4712 5501 -724 2318 108 0 3 chr20 26937905 26938212 -45215670 + AluSq SINE Alu 1 306 -7 5246 146 16 44 chr20 26938212 26938911 -45214971 + L1PB4 LINE L1 5501 6218 -7 529 283 51 81 chr20 26939187 26939556 -45214326 + MLT1J LTR MaLR 3 359 -152 1880 186 0 0 chr20 26940156 26940468 -45213414 + AluJb SINE Alu 1 312 0 29 0 0 0 chr20 26940619 26940648 -45213234 + AT_rich Low_complexity Low_complexity 1 29 0 270 225 12 75 chr20 26940720 26940800 -45213082 - MIR SINE MIR -71 191 117 212 254 15 30 chr20 26940799 26940866 -45213016 - MIR SINE MIR -93 169 104 * 766 340 175 2 chr20 26940876 26941499 -45212383 - L2 LINE L2 -871 2443 1713 6817 87 30 1 chr20 26941949 26942980 -45210902 + L1PA11 LINE L1 5116 6174 0 35 0 0 0 chr20 26942980 26943015 -45210867 + AT_rich Low_complexity Low_complexity 1 35 0 1489 167 20 39 chr20 26943025 26943331 -45210551 + AluJo SINE Alu 1 300 -12 370 208 0 0 chr20 26943716 26943788 -45210094 - L1ME3A LINE L1 -52 6118 6047 332 320 164 27 chr20 26945190 26945415 -45208467 - MIR SINE MIR -6 256 1 597 188 159 12 chr20 26945600 26945770 -45208112 + MER113 DNA MER1_type? 7 201 -320 903 206 6 12 chr20 26945855 26946025 -45207857 + FRAM SINE Alu 1 168 -8 515 198 73 0 chr20 26946148 26946244 -45207638 - MER5A DNA MER1_type -77 112 10 334 257 175 29 chr20 26946418 26946589 -45207293 + L2 LINE L2 3118 3313 0 440 275 25 31 chr20 26947289 26947449 -45206433 + LTR16A LTR ERVL 114 272 -178 2346 209 45 4 chr20 26947452 26948396 -45205486 + MER45B DNA AcHobo 1 1026 -14 3665 170 14 2 chr20 26948400 26948994 -45204888 - MER6A DNA MER2_type -4 601 1 448 275 66 22 chr20 26949001 26949088 -45204794 + LTR16A LTR ERVL 261 343 -107 360 43 0 0 chr20 26949088 26949134 -45204748 + (TTA)n Simple_repeat Simple_repeat 2 47 0 448 275 66 22 chr20 26949134 26949228 -45204654 + LTR16A LTR ERVL 343 450 0 318 165 25 63 chr20 26950083 26950162 -45203720 - L2 LINE L2 -25 3247 3172 320 271 53 15 chr20 26950648 26950781 -45203101 + L1ME4a LINE L1 5969 6106 -15 323 258 144 12 chr20 26950959 26951126 -45202756 - MLT1L LTR MaLR -4 611 423 678 224 39 34 chr20 26951322 26951501 -45202381 + MER3 DNA MER1_type 1 180 -29 244 209 15 90 chr20 26951570 26951637 -45202245 - MLT1L LTR MaLR -550 65 4 1436 214 3 27 chr20 26952252 26952547 -45201335 + AluJo SINE Alu 1 288 -24 354 198 0 27 chr20 26952564 26952675 -45201207 + (TA)n Simple_repeat Simple_repeat 2 109 0 401 366 44 0 chr20 26952697 26952902 -45200980 - LTR16A LTR ERVL -78 372 159 235 237 0 0 chr20 26953212 26953271 -45200611 + T-rich Low_complexity Low_complexity 1 59 0 28244 32 2 2 chr20 26953440 26957560 -45196322 - L1PA3 LINE L1 0 6155 2035 188 354 32 44 chr20 26957812 26957970 -45195912 - MIR SINE MIR -43 219 64 276 369 68 19 chr20 26958149 26958355 -45195527 - MIR SINE MIR -19 243 28 190 132 13 66 chr20 26958375 26958451 -45195431 + CT-rich Low_complexity Low_complexity 5 76 0 1116 185 5 5 chr20 26958516 26958711 -45195171 - AluSx SINE Alu -116 196 2 394 250 150 14 chr20 26958793 26958933 -45194949 - L2 LINE L2 -667 2647 2489 1672 167 54 0 chr20 26959002 26959278 -45194604 + AluJb SINE Alu 1 291 -21 731 225 41 6 chr20 26959281 26959450 -45194432 + HAL1 LINE L1 1530 1704 -803 21 43 0 22 chr20 26959902 26959930 -45193952 + AT_rich Low_complexity Low_complexity 1 29 -16 1687 154 39 0 chr20 26959930 26960209 -45193673 - AluJb SINE Alu -22 290 1 21 43 0 22 chr20 26960209 26960226 -45193656 + AT_rich Low_complexity Low_complexity 29 45 0 289 301 155 28 chr20 26960260 26960473 -45193409 - MIR SINE MIR -18 244 5 * 558 252 82 25 chr20 26960410 26960569 -45193313 + MIR SINE MIR 16 183 -79 184 222 0 28 chr20 26960566 26960602 -45193280 - MIR SINE MIR -194 68 34 * 1007 245 46 10 chr20 26960730 26961154 -45192728 + L1ME LINE L1 5060 5498 -664 305 244 37 0 chr20 26961158 26961240 -45192642 + L1ME LINE L1 5459 5543 -623 2280 113 0 0 chr20 26961726 26962035 -45191847 - AluSc SINE Alu 0 309 1 1092 287 64 12 chr20 26962200 26962604 -45191278 - LTR16B LTR ERVL -5 459 35 247 254 36 0 chr20 26962673 26962755 -45191127 + GA-rich Low_complexity Low_complexity 4 143 0 1135 187 35 98 chr20 26962852 26963167 -45190715 - MER2 DNA MER2_type 0 345 51 252 279 33 0 chr20 26963206 26963267 -45190615 - MIR SINE MIR 0 262 200 5641 89 23 0 chr20 26963318 26964093 -45189789 + L1PA13 LINE L1 5370 6162 -1 268 185 93 0 chr20 26964099 26964153 -45189729 - L2 LINE L2 -4 3309 3251 233 363 0 0 chr20 26964173 26964253 -45189629 + MIR SINE MIR 34 113 -95 270 336 84 28 chr20 26964324 26964467 -45189415 + L2 LINE L2 3122 3272 0 1052 249 75 43 chr20 26965279 26965653 -45188229 - LTR16C LTR ERVL 0 491 106 236 229 0 0 chr20 26966939 26966987 -45186895 + MLT1I LTR MaLR 98 145 -264 555 287 55 59 chr20 26967155 26967409 -45186473 - MIR SINE MIR 0 262 10 260 154 0 0 chr20 26967575 26967614 -45186268 + MIR SINE MIR 106 144 -118 29095 34 15 1 chr20 26969667 26975695 -45178187 + L1PA2 LINE L1 2 6151 -4 864 253 93 21 chr20 26976023 26976312 -45177570 + Charlie7 DNA MER1_type 188 497 -2115 236 238 0 32 chr20 26976409 26976472 -45177410 + Charlie7 DNA MER1_type 664 724 -1888 1048 252 162 56 chr20 26976644 26977088 -45176794 - LTR16C LTR ERVL 0 491 1 312 302 62 0 chr20 26977296 26977392 -45176490 - L2 LINE L2 -17 3296 3195 786 280 41 25 chr20 26977437 26977841 -45176041 - MLT1H LTR MaLR -11 398 23 274 206 137 20 chr20 26978131 26978233 -45175649 + MLT1K LTR MaLR 329 442 -146 3439 210 81 23 chr20 26979175 26980474 -45173408 + L1ME1 LINE L1 4786 6161 -5 318 296 0 0 chr20 26980634 26980705 -45173177 + MIR3 SINE MIR 86 156 -52 635 286 56 8 chr20 26981529 26981781 -45172101 - LTR16C LTR ERVL 0 491 228 1113 142 0 0 chr20 26982247 26982409 -45171473 + AluSg/x SINE Alu 131 292 -20 200 333 58 8 chr20 26982628 26982748 -45171134 - L2 LINE L2 -221 3051 2926 701 280 41 45 chr20 26982849 26983163 -45170719 - MER115 DNA AcHobo -25 668 356 524 322 88 31 chr20 26983237 26983464 -45170418 - MER115 DNA AcHobo -450 243 4 2297 105 0 0 chr20 26983481 26983775 -45170107 - AluSx SINE Alu -10 302 9 2880 112 49 11 chr20 26983840 26984287 -45169595 + L1MA4A LINE L1 5835 6298 -5 30 27 0 0 chr20 26984305 26984342 -45169540 + AT_rich Low_complexity Low_complexity 1 37 0 185 200 20 80 chr20 26984366 26984416 -45169466 + L2 LINE L2 3190 3236 -36 338 325 75 6 chr20 26984470 26984630 -45169252 - MIR SINE MIR -70 192 22 1649 163 7 17 chr20 26986124 26986419 -45167463 + AluJo SINE Alu 5 296 -16 2043 153 37 59 chr20 26986419 26986823 -45167059 + MER57A LTR ERV1 9 403 0 199 213 0 21 chr20 26986860 26986907 -45166975 + L2 LINE L2 3264 3309 -4 1990 143 3 7 chr20 26988632 26988939 -45164943 - AluSc SINE Alu -2 307 2 1386 279 72 64 chr20 26989143 26989702 -45164180 - MLT1G1 LTR MaLR 0 595 33 22 0 0 0 chr20 26989820 26989842 -45164040 + AT_rich Low_complexity Low_complexity 1 22 0 840 240 111 49 chr20 26989962 26990250 -45163632 - LTR16C LTR ERVL 0 491 186 1671 143 215 41 chr20 26990656 26990977 -45162905 + MSTB LTR MaLR 1 393 -33 2474 71 3 0 chr20 26990977 26991286 -45162596 - AluY SINE Alu -1 310 1 1671 143 215 41 chr20 26991286 26991327 -45162555 + MSTB LTR MaLR 393 426 0 2204 153 94 24 chr20 26991859 26992285 -45161597 + L1MB1 LINE L1 5465 5920 -392 1306 197 3 2 chr20 26992285 26992594 -45161288 - MLT1A1 LTR MaLR 0 365 8 1202 189 21 4 chr20 26992606 26992839 -45161043 + L1MB1 LINE L1 5919 6155 -13 43212 37 21 1 chr20 26992863 26998893 -45154989 - L1PA2 LINE L1 0 6155 1 884 216 11 26 chr20 26998894 26999084 -45154798 + L1MA10 LINE L1 6146 6332 -2 236 242 143 11 chr20 26999296 26999387 -45154495 + MLT1H LTR MaLR 345 447 -102 2702 126 27 50 chr20 26999891 27000329 -45153553 + MSTA LTR MaLR 1 428 0 200 180 40 0 chr20 27000495 27000545 -45153337 + (TA)n Simple_repeat Simple_repeat 1 52 0 672 261 153 42 chr20 27000762 27001095 -45152787 + LTR33 LTR ERVL 1 370 -151 246 267 0 17 chr20 27001140 27001200 -45152682 + LTR33 LTR ERVL 463 521 0 2285 148 11 11 chr20 27001527 27001916 -45151966 + MLT1B LTR MaLR 1 616 -10 20546 188 31 10 chr20 27002607 27008673 -45145209 + L1PA15 LINE L1 1 6245 -571 2526 71 0 3 chr20 27008673 27008984 -45144898 - AluY SINE Alu -1 310 1 20546 188 31 10 chr20 27008984 27009234 -45144648 + L1PA15 LINE L1 6245 6488 -328 882 237 5 5 chr20 27010994 27011180 -45142702 - MER3 DNA MER1_type 0 209 24 251 317 39 10 chr20 27011209 27011313 -45142569 - MIR SINE MIR -50 212 106 209 315 18 18 chr20 27012499 27012610 -45141272 + CT-rich Low_complexity Low_complexity 5 115 0 4108 165 24 6 chr20 27013355 27014069 -45139813 + L1MC2 LINE L1 5470 6196 -148 2361 100 10 189 chr20 27014277 27014797 -45139085 + MLT2A2 LTR ERVL 27 453 0 246 293 92 66 chr20 27014839 27015112 -45138770 - MLT1L LTR MaLR -335 280 1 629 252 145 15 chr20 27015193 27015455 -45138427 + MER5C DNA MER1_type 29 324 0 215 293 129 35 chr20 27015455 27015568 -45138314 + L2 LINE L2 3189 3312 -1 712 173 0 14 chr20 27016645 27016832 -45137050 + AluJ SINE Alu 96 310 -2 469 154 26 0 chr20 27020689 27020767 -45133115 + MLT1B LTR MaLR 1 80 -310 1082 123 45 0 chr20 27020776 27020931 -45132951 + AluYb8 SINE Alu 133 294 -24 1628 178 49 0 chr20 27020953 27021257 -45132625 + MLT1B LTR MaLR 72 390 0 683 218 4 0 chr20 27023335 27023573 -45130309 + (CA)n Simple_repeat Simple_repeat 1 239 0 6917 78 23 3 chr20 27024508 27025592 -45128290 - L1PB1 LINE L1 -5 6146 5053 237 33 0 0 chr20 27026609 27026639 -45127243 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 38684 83 9 13 chr20 27026641 27029720 -45124162 - L1PA6 LINE L1 -11 6143 3098 2618 65 0 0 chr20 27029720 27030027 -45123855 - AluY SINE Alu -4 307 1 38684 83 9 13 chr20 27030027 27033103 -45120779 - L1PA6 LINE L1 -3056 3098 12 804 259 29 17 chr20 27033198 27033437 -45120445 - L1ME3 LINE L1 0 6162 5921 450 190 183 49 chr20 27034964 27034990 -45118892 + L2 LINE L2 3148 3169 -144 3791 142 0 2 chr20 27034990 27035518 -45118364 + MER1A DNA MER1_type 1 527 0 450 190 183 49 chr20 27035518 27035633 -45118249 + L2 LINE L2 3169 3308 -5 832 242 46 33 chr20 27035836 27036142 -45117740 + L1M4 LINE L1 3164 3473 -2673 33 0 0 0 chr20 27036593 27036626 -45117256 + AT_rich Low_complexity Low_complexity 1 33 0 1302 275 63 28 chr20 27036663 27037275 -45116607 + L2 LINE L2 2421 3063 -250 196 269 58 19 chr20 27037275 27037327 -45116555 + L2 LINE L2 3245 3298 -15 1747 168 10 16 chr20 27037417 27037727 -45116155 + AluJo SINE Alu 1 308 -4 226 250 33 0 chr20 27037743 27037803 -45116079 + Charlie8 DNA MER1_type 33 94 -2323 11752 201 31 18 chr20 27037810 27042589 -45111293 - L1MB3 LINE L1 -1 6418 1606 3447 180 8 18 chr20 27042589 27043200 -45110682 - L1MB3 LINE L1 -5759 625 21 257 282 94 8 chr20 27043202 27043227 -45110655 + Charlie8 DNA MER1_type 84 105 -2312 1414 216 3 23 chr20 27043227 27043532 -45110350 + AluJo SINE Alu 1 299 -13 257 282 94 8 chr20 27043532 27043623 -45110259 + Charlie8 DNA MER1_type 105 210 -2207 3090 201 19 13 chr20 27043808 27044424 -45109458 + MLT1E3 LTR MaLR 1 620 -4 1902 152 30 0 chr20 27044550 27044847 -45109035 + AluJb SINE Alu 1 306 -6 729 299 101 5 chr20 27046017 27046452 -45107430 - LTR16C LTR ERVL -10 481 5 911 263 45 45 chr20 27046563 27046920 -45106962 - L1ME3 LINE L1 -1 6161 5805 428 302 71 14 chr20 27047165 27047330 -45106552 + MIR3 SINE MIR 10 186 -22 384 302 163 14 chr20 27047910 27048125 -45105757 + LTR16C LTR ERVL 245 491 0 292 245 0 48 chr20 27049511 27049628 -45104254 - MIR SINE MIR -77 131 45 787 238 35 6 chr20 27049896 27050068 -45103814 + MER5A DNA MER1_type 1 177 -12 303 218 16 105 chr20 27051097 27051221 -45102661 + MIR SINE MIR 100 212 -50 301 68 14 54 chr20 27051258 27051332 -45102550 + (TTA)n Simple_repeat Simple_repeat 2 72 0 1213 276 89 3 chr20 27051528 27051919 -45101963 + LTR16C LTR ERVL 67 491 0 410 256 103 37 chr20 27052118 27052360 -45101522 + L1ME4a LINE L1 5672 5929 -192 835 150 0 0 chr20 27052375 27052495 -45101387 - FLAM_C SINE Alu -13 120 1 2039 101 69 0 chr20 27052580 27052868 -45101014 - AluY SINE Alu -3 308 1 199 284 185 75 chr20 27053155 27053443 -45100439 - L2 LINE L2 -337 2977 2637 1091 207 231 42 chr20 27053443 27053776 -45100106 + MSTD LTR MaLR 1 396 0 199 284 185 75 chr20 27053776 27053860 -45100022 - L2 LINE L2 -677 2637 2564 2423 81 0 0 chr20 27055376 27055673 -45098209 - AluY SINE Alu -14 297 1 299 242 62 16 chr20 27055717 27055869 -45098013 - MSTC LTR MaLR -146 250 45 233 269 148 53 chr20 27056111 27056394 -45097488 + L1MC/D LINE L1 5255 5564 -2244 249 213 31 106 chr20 27057229 27057389 -45096493 + HAL1b LINE L1 1191 1338 -10 938 205 0 0 chr20 27057472 27057633 -45096249 + FRAM SINE Alu 1 161 -15 1713 158 13 26 chr20 27057776 27058086 -45095796 + AluJb SINE Alu 1 306 -6 278 362 158 26 chr20 27058181 27058485 -45095397 - L2 LINE L2 -9 3263 2920 25 0 0 0 chr20 27060387 27060412 -45093470 + AT_rich Low_complexity Low_complexity 1 25 0 1772 145 35 14 chr20 27060478 27060760 -45093122 + AluSx SINE Alu 7 294 -18 1355 122 0 11 chr20 27060880 27061069 -45092813 + AluSx SINE Alu 1 187 -125 1051 81 6 63 chr20 27061472 27061646 -45092236 - L1PB4 LINE L1 -222 5934 5771 1428 194 4 4 chr20 27061646 27061885 -45091997 + L1PB4 LINE L1 5905 6156 0 1328 232 116 19 chr20 27061891 27063014 -45090868 - L1MDb LINE L1 -4411 1995 783 * 4961 197 29 21 chr20 27062979 27064338 -45089544 + L1MC2 LINE L1 4847 6227 -117 1741 78 102 0 chr20 27064338 27064582 -45089300 + AluY SINE Alu 37 305 -6 4961 197 29 21 chr20 27064582 27064699 -45089183 + L1MC2 LINE L1 6227 6342 -2 709 255 103 11 chr20 27065196 27065522 -45088360 + L1MC4 LINE L1 7431 7711 -97 237 196 0 0 chr20 27065524 27065580 -45088302 + (CA)n Simple_repeat Simple_repeat 1 56 0 331 314 77 12 chr20 27065598 27065767 -45088115 + MIR3 SINE MIR 3 182 -26 1151 57 23 17 chr20 27065862 27065927 -45087955 + (GAAA)n Simple_repeat Simple_repeat 1 243 0 1151 57 23 17 chr20 27065927 27066104 -45087778 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 638 108 0 10 chr20 27066159 27066261 -45087621 + (GGAGA)n Simple_repeat Simple_repeat 4 104 0 507 242 52 33 chr20 27067039 27067192 -45086690 + MIR SINE MIR 90 245 -17 1716 177 50 21 chr20 27067420 27067798 -45086084 - Charlie5 DNA MER1_type 0 2624 2236 299 137 14 68 chr20 27067800 27067873 -45086009 - Charlie5 DNA MER1_type -2488 124 56 23 0 0 0 chr20 27068101 27068124 -45085758 + AT_rich Low_complexity Low_complexity 1 23 0 195 42 0 0 chr20 27068536 27068560 -45085322 + (CA)n Simple_repeat Simple_repeat 2 25 0 44517 46 2 1 chr20 27068597 27074750 -45079132 + L1PA3 LINE L1 1 6155 0 246 32 0 0 chr20 27075091 27075122 -45078760 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 484 292 39 13 chr20 27075319 27075473 -45078409 - MIR SINE MIR -90 172 15 518 270 65 50 chr20 27075882 27076082 -45077800 + MIR SINE MIR 35 237 -25 401 185 74 0 chr20 27076485 27076566 -45077316 - MER58B DNA MER1_type -3 338 252 322 279 13 13 chr20 27076579 27076658 -45077224 + MER5B DNA MER1_type 56 134 -44 2271 101 3 16 chr20 27077825 27078132 -45075750 + AluSg1 SINE Alu 1 303 -6 2390 109 0 0 chr20 27078647 27078959 -45074923 + AluSx SINE Alu 1 312 0 2490 151 39 0 chr20 27079320 27079751 -45074131 + L1PB4 LINE L1 5709 6156 0 421 37 37 73 chr20 27080375 27080484 -45073398 + (ATTAG)n Simple_repeat Simple_repeat 4 108 0 235 288 128 59 chr20 27081853 27082159 -45071723 - LTR16C LTR ERVL -164 327 1 800 218 24 6 chr20 27083193 27083363 -45070519 + MER5A DNA MER1_type 17 189 0 1517 155 29 4 chr20 27083989 27084266 -45069616 + L1MC1 LINE L1 6047 6330 -3 398 261 11 0 chr20 27084293 27084385 -45069497 - MER5A DNA MER1_type -93 96 4 1088 151 0 6 chr20 27084517 27084676 -45069206 + FAM SINE Alu 12 169 -16 304 291 0 0 chr20 27084687 27084766 -45069116 - L1MC4 LINE L1 -1339 6703 6625 417 220 0 0 chr20 27084791 27084900 -45068982 + (TA)n Simple_repeat Simple_repeat 1 109 0 311 69 0 69 chr20 27084907 27084965 -45068917 - MADE1 DNA Mariner 0 80 27 2003 141 3 3 chr20 27085233 27085556 -45068326 - AluSx SINE Alu 0 323 1 319 318 148 32 chr20 27085827 27086044 -45067838 + MIR SINE MIR 21 262 0 1299 260 103 29 chr20 27086688 27087242 -45066640 + L1ME3A LINE L1 5541 6135 -35 13791 165 87 1 chr20 27087716 27091905 -45061977 + L1PBa LINE L1 1 4553 -2309 1789 94 41 0 chr20 27091905 27092170 -45061712 + L1PB1 LINE L1 5873 6150 -1 210 216 0 0 chr20 27092249 27092286 -45061596 + (CTG)n Simple_repeat Simple_repeat 2 38 0 278 267 58 23 chr20 27092968 27093054 -45060828 - L2 LINE L2 -2 3311 3223 900 230 127 57 chr20 27093247 27093593 -45060289 + Zaphod DNA AcHobo 223 620 -3411 7383 38 0 0 chr20 27093593 27094507 -45059375 + L1PA4 LINE L1 5234 6147 -8 900 230 127 57 chr20 27094507 27094686 -45059196 + Zaphod DNA AcHobo 620 785 -3246 * 4897 189 62 65 chr20 27094683 27095998 -45057884 + Zaphod DNA AcHobo 2409 3720 -311 2410 103 0 0 chr20 27095998 27096309 -45057573 + AluSx SINE Alu 1 311 -1 4897 189 62 65 chr20 27096309 27096615 -45057267 + Zaphod DNA AcHobo 3720 4025 -6 1983 77 0 0 chr20 27096842 27097088 -45056794 + AluY SINE Alu 56 301 -10 3093 41 0 13 chr20 27099208 27099599 -45054283 - L1PA3 LINE L1 0 6155 5770 41744 45 0 3 chr20 27099615 27105779 -45048103 - L1PA3 LINE L1 0 6155 7 1412 192 4 11 chr20 27105808 27106068 -45047814 + AluJo SINE Alu 1 258 -54 23 0 0 0 chr20 27106279 27106302 -45047580 + AT_rich Low_complexity Low_complexity 1 23 0 754 296 22 13 chr20 27106720 27106950 -45046932 + MIR SINE MIR 31 262 0 727 249 98 0 chr20 27107611 27107836 -45046046 + LTR16C LTR ERVL 245 491 0 224 109 65 0 chr20 27109047 27109093 -45044789 + T-rich Low_complexity Low_complexity 2 50 0 230 313 15 0 chr20 27109114 27109181 -45044701 + Charlie8 DNA MER1_type 198 265 -2152 40 83 0 0 chr20 27109414 27109510 -45044372 + AT_rich Low_complexity Low_complexity 1 96 0 440 262 41 33 chr20 27109841 27109963 -45043919 + MER5C DNA MER1_type 2 124 -200 204 88 176 0 chr20 27110127 27110161 -45043721 + MER5C DNA MER1_type 285 324 0 2441 96 3 0 chr20 27111801 27112113 -45041769 - AluSp SINE Alu 0 313 1 2464 167 29 9 chr20 27112162 27112610 -45041272 - MSTB2 LTR MaLR 0 457 1 186 308 115 13 chr20 27113569 27113647 -45040235 - L2 LINE L2 -25 3247 3162 242 352 22 0 chr20 27113850 27113941 -45039941 - MIR3 SINE MIR -30 178 86 2277 88 3 55 chr20 27114067 27114397 -45039485 + AluSp SINE Alu 1 313 0 9156 180 26 13 chr20 27114794 27117955 -45035927 - L1MA4A LINE L1 -1 7004 3792 6611 206 26 60 chr20 27117952 27119664 -45034218 - L1MA4A LINE L1 -4631 2218 565 * 2046 103 7 36 chr20 27119806 27120107 -45033775 + AluSx SINE Alu 1 292 -20 332 100 0 0 chr20 27120575 27120625 -45033257 - MADE1 DNA Mariner 0 80 31 371 319 8 0 chr20 27120739 27120858 -45033024 - MIR SINE MIR -12 250 131 * 727 286 84 80 chr20 27120856 27121183 -45032699 - L2 LINE L2 -4 3309 2985 1899 125 36 4 chr20 27121183 27121462 -45032420 + AluSx SINE Alu 1 288 -24 223 49 49 0 chr20 27121466 27121507 -45032375 + (CAA)n Simple_repeat Simple_repeat 2 44 0 727 286 84 80 chr20 27121507 27121919 -45031963 - L2 LINE L2 -330 2983 2567 573 283 44 19 chr20 27121942 27122147 -45031735 - MIR SINE MIR -12 250 41 224 180 20 20 chr20 27122193 27122243 -45031639 - L2 LINE L2 -2483 831 782 198 329 161 13 chr20 27122285 27122434 -45031448 - MIR SINE MIR -1 261 91 307 299 119 34 chr20 27122647 27122857 -45031025 - MIR SINE MIR -42 220 4 254 400 46 31 chr20 27122892 27123152 -45030730 + L2 LINE L2 3001 3264 -8 2171 125 3 0 chr20 27123286 27123582 -45030300 + AluSx SINE Alu 1 297 -15 548 280 113 11 chr20 27123751 27123937 -45029945 + MIR SINE MIR 10 214 -48 1015 299 101 20 chr20 27125788 27126015 -45027867 - L1MEc LINE L1 -4266 2130 1923 857 227 37 19 chr20 27126015 27126114 -45027768 - MER58A DNA MER1_type -2196 224 128 348 24 0 0 chr20 27126114 27126155 -45027727 + (GA)n Simple_repeat Simple_repeat 2 42 0 857 227 37 19 chr20 27126155 27126271 -45027611 - MER58A DNA MER1_type -2292 128 5 1015 299 101 20 chr20 27126271 27126639 -45027243 - L1MEc LINE L1 -4473 1923 1487 555 265 41 71 chr20 27127318 27127586 -45026296 - MLT1K LTR MaLR 0 588 329 238 214 100 0 chr20 27127761 27127831 -45026051 - MLT1K LTR MaLR -500 88 12 419 247 184 36 chr20 27127933 27128156 -45025726 - LTR16C LTR ERVL -6 485 230 1725 232 48 63 chr20 27128168 27128672 -45025210 - MLT1D LTR MaLR -4 501 6 188 284 119 37 chr20 27129331 27129440 -45024442 - MIR SINE MIR -51 211 94 2433 40 40 3 chr20 27129725 27130025 -45023857 + AluY SINE Alu 1 311 0 2131 129 10 0 chr20 27130060 27130370 -45023512 - AluSp SINE Alu 0 313 1 422 291 8 16 chr20 27131248 27131375 -45022507 + L2 LINE L2 1378 1503 -1811 294 307 175 0 chr20 27131486 27131600 -45022282 + L2 LINE L2 3138 3271 -1 277 204 160 3 chr20 27131829 27131924 -45021958 - MLT1I LTR MaLR -18 549 281 326 311 132 14 chr20 27132079 27132298 -45021584 - MLT1H LTR MaLR -300 249 5 188 214 146 22 chr20 27133356 27133445 -45020437 + MIR SINE MIR 33 132 -76 218 216 14 0 chr20 27133611 27133685 -45020197 + (CA)n Simple_repeat Simple_repeat 2 76 0 9805 186 10 7 chr20 27137917 27140985 -45012897 + L1PB2 LINE L1 3073 6150 -1 1989 111 42 7 chr20 27140989 27141278 -45012604 + AluSx SINE Alu 1 299 -13 965 219 81 3 chr20 27141278 27141561 -45012321 - MER33 DNA MER1_type -19 305 1 465 297 81 24 chr20 27141778 27141987 -45011895 + MIR SINE MIR 5 225 -37 1008 257 174 3 chr20 27142043 27142382 -45011500 + MLT1I LTR MaLR 3 399 -10 290 26 26 0 chr20 27144324 27144363 -45009519 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 70 0 0 chr20 27145892 27145935 -45007947 + AT_rich Low_complexity Low_complexity 1 43 0 358 279 124 41 chr20 27145956 27146343 -45007539 - L1ME4a LINE L1 -220 5901 5475 1535 187 7 111 chr20 27146343 27146750 -45007132 - MLT1A1 LTR MaLR 0 365 1 358 279 124 41 chr20 27146750 27146800 -45007082 - L1ME4a LINE L1 -646 5475 5431 188 178 188 50 chr20 27147730 27147831 -45006051 - MIR SINE MIR -17 245 131 1054 213 57 0 chr20 27149323 27149534 -45004348 - MER58A DNA MER1_type 0 224 2 961 274 24 5 chr20 27149589 27149968 -45003914 + L1 LINE L1 3139 3524 -2622 1980 180 21 7 chr20 27149969 27150396 -45003486 + L1MB4 LINE L1 5742 6174 -6 391 329 81 55 chr20 27150679 27151184 -45002698 + L1M4 LINE L1 2200 2717 -3429 1298 82 25 10 chr20 27151185 27151381 -45002501 + L1MA5A LINE L1 6095 6293 -4 21 0 0 0 chr20 27151388 27151409 -45002473 + AT_rich Low_complexity Low_complexity 1 21 0 2135 241 48 34 chr20 27151417 27152270 -45001612 + L1M3 LINE L1 1170 2122 -4262 897 189 36 5 chr20 27152265 27152461 -45001421 + L1M3 LINE L1 5599 5800 -380 * 7830 221 94 46 chr20 27152450 27152797 -45001085 + L1M3 LINE L1 2115 2444 -3972 2419 25 7 3 chr20 27152797 27153120 -45000762 - AluY SINE Alu 0 324 1 7830 221 94 46 chr20 27153120 27153414 -45000468 + L1M3 LINE L1 2444 2722 -3694 1200 191 17 4 chr20 27153414 27153645 -45000237 - MER46A DNA MER2_type -2 234 1 7830 221 94 46 chr20 27153645 27154590 -44999292 + L1M3 LINE L1 2722 3620 -2796 2505 77 0 0 chr20 27154590 27154901 -44998981 + AluY SINE Alu 1 311 0 7830 221 94 46 chr20 27154901 27155347 -44998535 + L1M3 LINE L1 3620 4043 -2373 2169 119 0 16 chr20 27155347 27155659 -44998223 - AluSx SINE Alu -5 307 1 7830 221 94 46 chr20 27155659 27157137 -44996745 + L1M3 LINE L1 4043 5789 -627 13692 185 38 28 chr20 27157339 27164255 -44989627 + L1MA4A LINE L1 1 6999 -6 264 246 227 82 chr20 27165519 27165933 -44987949 + L2 LINE L2 2729 3168 -145 335 296 131 38 chr20 27165938 27166205 -44987677 - LTR16C LTR ERVL -2 489 198 306 220 17 0 chr20 27166520 27166579 -44987303 + L2 LINE L2 3247 3306 -7 249 313 73 0 chr20 27168973 27169069 -44984813 + MIR SINE MIR 142 244 -18 488 231 43 87 chr20 27169328 27169536 -44984346 - MER63A DNA MER1_type -11 199 1 225 0 0 0 chr20 27173961 27173986 -44979896 + (TG)n Simple_repeat Simple_repeat 2 26 0 187 270 143 0 chr20 27174044 27174107 -44979775 - MIR SINE MIR 0 262 191 1066 254 75 80 chr20 27174166 27174603 -44979279 + LTR16C LTR ERVL 57 491 0 224 214 243 14 chr20 27174607 27174677 -44979205 - MIR SINE MIR -73 189 104 1879 119 0 0 chr20 27174681 27174941 -44978941 + AluSx SINE Alu 1 260 -52 23 0 0 0 chr20 27175954 27175977 -44977905 + AT_rich Low_complexity Low_complexity 1 23 0 2386 71 7 3 chr20 27177124 27177432 -44976450 - AluY SINE Alu -2 309 1 24 77 0 0 chr20 27178394 27178446 -44975436 + AT_rich Low_complexity Low_complexity 1 52 0 30 77 0 0 chr20 27178548 27178613 -44975269 + AT_rich Low_complexity Low_complexity 1 65 0 460 259 37 7 chr20 27178984 27179119 -44974763 + L1MC5 LINE L1 6692 6830 -1131 2216 255 55 80 chr20 27179126 27180199 -44973683 + L1M4b LINE L1 11 1107 -5748 2909 70 0 3 chr20 27180199 27180585 -44973297 + L1PA5 LINE L1 5770 6154 0 2216 255 55 80 chr20 27180585 27181408 -44972474 + L1M4b LINE L1 1107 1949 -4906 3854 179 46 21 chr20 27181560 27182366 -44971516 + LTR1B LTR ERV1 1 826 0 22 0 0 0 chr20 27182439 27182461 -44971421 + AT_rich Low_complexity Low_complexity 1 22 0 310 231 19 96 chr20 27182461 27182565 -44971317 - L1M4b LINE L1 -5952 907 812 876 233 3 50 chr20 27182569 27182852 -44971030 + L1M4b LINE L1 1959 2228 -4731 4634 269 75 26 chr20 27182869 27183018 -44970864 + L1MB5 LINE L1 15 155 -6804 1879 141 0 40 chr20 27183018 27183322 -44970560 + AluY SINE Alu 1 292 -19 4634 269 75 26 chr20 27183322 27184648 -44969234 + L1MB5 LINE L1 155 1638 -5321 1240 177 4 33 chr20 27184648 27184891 -44968991 + MER46A DNA MER2_type 1 236 0 4634 269 75 26 chr20 27184891 27185681 -44968201 + L1MB5 LINE L1 1638 2388 -4571 667 247 60 42 chr20 27186043 27186428 -44967454 + L1MB5 LINE L1 2756 3147 -3991 1382 272 76 21 chr20 27186616 27187050 -44966832 + Zaphod DNA AcHobo 160 617 -3414 231 218 115 11 chr20 27187059 27187146 -44966736 + Zaphod DNA AcHobo 592 687 -3344 25 0 0 0 chr20 27190205 27190230 -44963652 + AT_rich Low_complexity Low_complexity 1 25 0 631 111 62 4 chr20 27190380 27190626 -44963256 + (TA)n Simple_repeat Simple_repeat 1 260 0 301 188 10 89 chr20 27190705 27190806 -44963076 + L1MC4 LINE L1 6611 6703 -1339 568 160 29 17 chr20 27190806 27190981 -44962901 + (TA)n Simple_repeat Simple_repeat 1 177 0 527 152 44 15 chr20 27191049 27191765 -44962117 + (TA)n Simple_repeat Simple_repeat 1 736 0 287 203 0 53 chr20 27191801 27191988 -44961894 + (TA)n Simple_repeat Simple_repeat 1 177 0 533 158 53 9 chr20 27192010 27192387 -44961495 + (TA)n Simple_repeat Simple_repeat 1 434 -57 227 30 0 30 chr20 27192387 27192420 -44961462 + (TTATA)n Simple_repeat Simple_repeat 3 34 0 533 158 53 9 chr20 27192420 27192481 -44961401 + (TA)n Simple_repeat Simple_repeat 434 491 0 3166 124 6 4 chr20 27192516 27193016 -44960866 + L1PB1 LINE L1 5646 6146 -5 3096 235 61 44 chr20 27193038 27193190 -44960692 + L1MB5 LINE L1 3126 3274 -3683 1500 252 16 38 chr20 27193190 27193643 -44960239 + LTR47B LTR ERVL 1 443 0 3096 235 61 44 chr20 27193643 27193940 -44959942 + L1MB5 LINE L1 3274 3564 -3393 2084 122 0 26 chr20 27193940 27194243 -44959639 - AluSg SINE Alu -15 295 1 3096 235 61 44 chr20 27194243 27195024 -44958858 + L1MB5 LINE L1 3564 4378 -2579 2364 41 0 0 chr20 27195058 27195353 -44958529 - L1PA6 LINE L1 -907 5239 4945 6902 67 1 1 chr20 27195353 27196249 -44957633 + L1PA6 LINE L1 5258 6154 0 4032 212 61 13 chr20 27196251 27197848 -44956034 + L1MB5 LINE L1 5312 6979 -6 3079 197 86 36 chr20 27198094 27199604 -44954278 + L1ME1 LINE L1 4597 6330 -4 1453 199 45 68 chr20 27199772 27200169 -44953713 - MLT1B LTR MaLR 0 390 3 379 289 107 0 chr20 27200322 27200443 -44953439 + MER5A DNA MER1_type 55 188 -1 183 333 30 20 chr20 27200443 27200502 -44953380 - L3 LINE CR1 -658 919 860 728 182 110 38 chr20 27200504 27200713 -44953169 - MER58A DNA MER1_type 0 224 1 211 320 93 10 chr20 27200861 27200958 -44952924 + MER5A DNA MER1_type 64 168 -21 418 274 28 95 chr20 27201356 27201535 -44952347 + MIR SINE MIR 31 197 -65 1676 220 41 17 chr20 27201609 27202023 -44951859 - L1MC3 LINE L1 -8 7777 7354 386 202 0 85 chr20 27202922 27203016 -44950866 + MIR3 SINE MIR 123 208 0 383 234 195 19 chr20 27203785 27203939 -44949943 + MER5A DNA MER1_type 9 189 0 2253 100 20 0 chr20 27204061 27204362 -44949520 + AluSx SINE Alu 1 307 -5 2173 130 0 0 chr20 27206165 27206464 -44947418 + AluSx SINE Alu 1 299 -13 302 164 30 30 chr20 27206535 27206602 -44947280 + MER5A DNA MER1_type 5 71 -118 209 374 150 27 chr20 27207079 27207373 -44946509 + L2 LINE L2 2921 3250 -22 276 359 0 0 chr20 27208295 27208387 -44945495 - MIR3 SINE MIR -27 181 90 771 213 33 0 chr20 27208434 27208617 -44945265 + MER5A DNA MER1_type 1 189 0 195 338 0 13 chr20 27209772 27209849 -44944033 - MIR SINE MIR -108 154 79 398 159 11 0 chr20 27210661 27210749 -44943133 + (TA)n Simple_repeat Simple_repeat 2 90 0 252 77 0 0 chr20 27211920 27211959 -44941923 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 264 284 99 37 chr20 27212549 27212711 -44941171 - LTR33A LTR ERVL -235 288 117 815 203 52 0 chr20 27213270 27213459 -44940423 + MIR SINE MIR 34 228 -34 633 219 102 0 chr20 27214691 27214828 -44939054 + MER5A DNA MER1_type 1 151 -38 780 175 17 0 chr20 27216437 27216448 -44937434 + (TCCA)n Simple_repeat Simple_repeat 1 10 -170 2536 99 6 0 chr20 27216448 27216800 -44937082 - THE1A LTR MaLR -1 354 1 780 175 17 0 chr20 27216800 27216965 -44936917 + (TCCA)n Simple_repeat Simple_repeat 10 180 0 246 217 33 0 chr20 27216976 27217036 -44936846 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 205 191 32 16 chr20 27217030 27217093 -44936789 + (TATAA)n Simple_repeat Simple_repeat 5 68 0 * 467 295 90 37 chr20 27217095 27217363 -44936519 - MLT1J LTR MaLR -8 503 222 26 50 0 0 chr20 27217574 27217614 -44936268 + AT_rich Low_complexity Low_complexity 1 40 0 210 140 0 60 chr20 27217855 27217905 -44935977 + (GAAA)n Simple_repeat Simple_repeat 4 50 0 450 297 8 21 chr20 27219414 27219580 -44934302 - MIR SINE MIR -78 130 22 364 274 26 17 chr20 27219605 27219722 -44934160 - MER94 DNA DNA -1 133 16 289 247 45 11 chr20 27220205 27220294 -44933588 - MLT1K LTR MaLR -122 466 375 287 307 10 0 chr20 27220428 27220529 -44933353 - L1ME1 LINE L1 -15 6151 6050 332 285 62 62 chr20 27221420 27221599 -44932283 + MIR3 SINE MIR 20 198 -10 277 399 31 21 chr20 27221665 27221858 -44932024 - MIR SINE MIR -22 240 46 1082 243 42 52 chr20 27222563 27222987 -44930895 - HsTC2 DNA Tc2 -15 1883 1288 283 198 181 69 chr20 27222980 27223096 -44930786 - HsTC2 DNA Tc2 -1747 151 23 * 293 214 0 0 chr20 27223843 27223899 -44929983 + MER63 DNA MER1_type 696 751 -311 550 110 258 18 chr20 27224527 27224658 -44929224 + MLT1B LTR MaLR 268 390 0 656 246 16 37 chr20 27224658 27224845 -44929037 - L1ME LINE L1 -445 5725 5543 335 333 23 23 chr20 27225845 27225974 -44927908 - MIR SINE MIR -114 148 20 267 308 75 15 chr20 27225996 27226129 -44927753 + L3 LINE CR1 750 890 -687 437 264 159 15 chr20 27226240 27226441 -44927441 + MIR SINE MIR 3 232 -30 458 321 77 24 chr20 27226673 27226960 -44926922 - L2 LINE L2 -6 3307 3006 1810 172 39 0 chr20 27227609 27227894 -44925988 + AluJb SINE Alu 1 296 -16 254 290 68 74 chr20 27228204 27228380 -44925502 + MER5B DNA MER1_type 2 176 -2 2044 164 9 6 chr20 27228469 27228817 -44925065 + MLT1A1 LTR MaLR 13 361 -4 1419 130 40 0 chr20 27230747 27230994 -44922888 + L1MA5A LINE L1 6031 6287 -10 21 0 0 0 chr20 27231173 27231194 -44922688 + AT_rich Low_complexity Low_complexity 1 21 0 235 296 11 45 chr20 27233511 27233599 -44920283 + L2 LINE L2 3188 3272 0 411 214 200 21 chr20 27233982 27234122 -44919760 - MER5B DNA MER1_type -7 171 7 188 330 143 22 chr20 27237038 27237268 -44916614 + MIR SINE MIR 5 262 0 242 283 101 0 chr20 27237903 27238002 -44915880 + MIR SINE MIR 53 161 -101 765 293 44 1 chr20 27239041 27239258 -44914624 + MIR SINE MIR 33 256 -6 279 132 38 0 chr20 27239759 27239812 -44914070 + L1MB3 LINE L1 5279 5333 -847 628 231 102 5 chr20 27239828 27240014 -44913868 + L1MA4 LINE L1 6086 6289 -11 4733 170 14 6 chr20 27240018 27240875 -44913007 + L1MB3 LINE L1 5319 6182 -1 4318 76 30 33 chr20 27242121 27242317 -44911565 - L1P LINE L1 -959 5187 4992 5494 19 0 0 chr20 27242317 27242943 -44910939 - L1PA3 LINE L1 -4 6151 5526 4318 76 30 33 chr20 27242943 27243389 -44910493 - L1P LINE L1 -1154 4992 4547 6907 62 2 8 chr20 27243391 27244364 -44909518 + L1PA7 LINE L1 5185 6152 -2 691 309 41 16 chr20 27244500 27244746 -44909136 - MIR SINE MIR -6 256 5 483 260 50 79 chr20 27245038 27245369 -44908513 - MLT1I LTR MaLR -25 384 94 603 0 0 0 chr20 27246211 27246278 -44907604 + (TTTTC)n Simple_repeat Simple_repeat 5 71 0 340 326 76 29 chr20 27246931 27247103 -44906779 + MIR SINE MIR 37 216 -46 764 127 14 7 chr20 27247185 27247327 -44906555 - L1MA4A LINE L1 -16 6287 6145 315 226 86 0 chr20 27247338 27247431 -44906451 + Charlie8 DNA MER1_type 71 171 -2246 1167 277 79 39 chr20 27247437 27247996 -44905886 - MLT1G1 LTR MaLR -6 589 9 315 328 82 41 chr20 27247993 27248188 -44905694 + Charlie8 DNA MER1_type 152 354 -2063 * 2348 251 94 33 chr20 27248417 27249357 -44904525 + L1M4c LINE L1 704 1700 -4842 2343 157 2 2 chr20 27249371 27249765 -44904117 - L1PA16 LINE L1 0 6166 5773 11468 155 16 4 chr20 27249769 27252536 -44901346 - L1PA13 LINE L1 -11 6152 3256 * 38135 84 9 7 chr20 27252525 27258661 -44895221 - L1PA6 LINE L1 0 6154 11 8701 216 45 15 chr20 27258672 27260829 -44893053 - L1PA13 LINE L1 -2866 3280 1060 4510 184 11 17 chr20 27260837 27262384 -44891498 - L1PA16 LINE L1 -315 5851 4316 277 260 0 0 chr20 27262375 27262448 -44891434 + L1M4c LINE L1 1836 1908 -4738 * 14515 194 15 20 chr20 27262443 27266712 -44887170 + L1PB1 LINE L1 1697 5988 -879 2302 105 0 0 chr20 27266712 27267017 -44886865 + AluSg SINE Alu 1 305 -5 14515 194 15 20 chr20 27267017 27267590 -44886292 + L1PB1 LINE L1 5988 6567 -300 2251 107 3 0 chr20 27267590 27267889 -44885993 - AluSp SINE Alu -13 300 1 14515 194 15 20 chr20 27267889 27268189 -44885693 + L1PB1 LINE L1 6567 6867 0 3671 252 75 13 chr20 27268289 27270158 -44883724 + L1M4c LINE L1 2185 4182 -2462 693 135 45 8 chr20 27270160 27270293 -44883589 + L1MB5 LINE L1 6037 6174 0 7810 179 40 26 chr20 27270304 27271771 -44882111 + L1MC3 LINE L1 6128 7622 -163 216 97 0 0 chr20 27271771 27271802 -44882080 + (CAT)n Simple_repeat Simple_repeat 2 32 0 7810 179 40 26 chr20 27271802 27271968 -44881914 + L1MC3 LINE L1 7622 7784 -1 254 370 41 27 chr20 27271979 27272125 -44881757 - MER5B DNA MER1_type -1 177 30 274 297 81 27 chr20 27273337 27273522 -44880360 - MIR SINE MIR -28 234 40 637 196 24 183 chr20 27273618 27273995 -44879887 - L1M4 LINE L1 -2100 3870 3554 1531 228 58 11 chr20 27274010 27274458 -44879424 - L1M4 LINE L1 -3236 2734 2266 24 0 0 0 chr20 27274527 27274551 -44879331 + AT_rich Low_complexity Low_complexity 1 24 0 1947 245 45 15 chr20 27274552 27275531 -44878351 - L1M4 LINE L1 -4714 1177 1 439 225 72 0 chr20 27275506 27275644 -44878238 - L1M4 LINE L1 -3730 2240 2093 * 8324 202 40 11 chr20 27275668 27279940 -44873942 + L1PB1 LINE L1 2042 6186 -616 452 32 0 16 chr20 27279940 27280003 -44873879 + (TA)n Simple_repeat Simple_repeat 1 62 0 207 100 0 0 chr20 27280002 27280032 -44873850 + (CA)n Simple_repeat Simple_repeat 2 31 0 * 8324 202 40 11 chr20 27280003 27280324 -44873558 + L1PB1 LINE L1 6186 6800 -2 470 239 68 8 chr20 27280547 27280664 -44873218 + MER5C DNA MER1_type 1 124 -200 509 283 154 41 chr20 27281543 27281861 -44872021 - MLT1I LTR MaLR -54 355 2 497 289 57 11 chr20 27281894 27282157 -44871725 - L1ME LINE L1 -316 5805 5531 323 268 71 16 chr20 27282766 27282893 -44870989 + L1MC4a LINE L1 5186 5319 -827 519 324 51 30 chr20 27282987 27283358 -44870524 + L1MC4a LINE L1 5533 5911 -1897 488 284 138 37 chr20 27283368 27283586 -44870296 + MIR SINE MIR 2 241 -21 21 0 0 0 chr20 27283838 27283859 -44870023 + AT_rich Low_complexity Low_complexity 1 21 0 186 188 0 62 chr20 27284011 27284059 -44869823 - L2 LINE L2 -3 3269 3225 22 70 0 0 chr20 27285130 27285173 -44868709 + AT_rich Low_complexity Low_complexity 1 43 0 1768 108 88 30 chr20 27287866 27288187 -44865695 - AluSx SINE Alu 0 338 1 499 213 50 35 chr20 27291741 27291882 -44862000 + MER69 DNA AcHobo 2380 2522 -4 856 219 16 37 chr20 27292762 27293004 -44860878 - L1MC4 LINE L1 -453 7589 7353 529 236 260 8 chr20 27293006 27293264 -44860618 + L1MC4 LINE L1 7720 8042 0 288 0 0 0 chr20 27293924 27293956 -44859926 + (TTA)n Simple_repeat Simple_repeat 2 33 0 404 301 55 27 chr20 27294268 27294414 -44859468 + MER91A DNA MER1_type 10 159 -37 311 186 17 0 chr20 27294690 27294749 -44859133 + L1ME4a LINE L1 5810 5869 -252 32 0 0 0 chr20 27294944 27294976 -44858906 + AT_rich Low_complexity Low_complexity 1 32 0 252 254 101 29 chr20 27295087 27295296 -44858586 + L1ME4a LINE L1 5881 6104 -17 745 257 75 0 chr20 27296778 27296992 -44856890 - MER46C DNA MER2_type -108 230 1 682 297 168 18 chr20 27296992 27297653 -44856229 + L2 LINE L2 2284 3052 -261 223 320 107 0 chr20 27297817 27297892 -44855990 + L2 LINE L2 3231 3313 0 307 247 0 13 chr20 27299459 27299536 -44854346 - MIR SINE MIR -119 143 68 2460 63 0 3 chr20 27300624 27300923 -44852959 + AluY SINE Alu 2 299 -12 284 256 139 0 chr20 27301041 27301127 -44852755 - LTR16A LTR ERVL -349 101 4 2392 154 158 9 chr20 27301127 27301575 -44852307 + MLT2B2 LTR ERVL 1 515 0 299 261 54 0 chr20 27303311 27303403 -44850479 - MLT1H1 LTR MaLR 0 555 459 568 270 77 73 chr20 27303489 27303763 -44850119 - MLT1H1 LTR MaLR -280 275 1 507 326 78 35 chr20 27305645 27305989 -44847893 + LTR16C LTR ERVL 41 399 -92 486 75 0 0 chr20 27306849 27306916 -44846966 + (CA)n Simple_repeat Simple_repeat 2 68 0 22 35 0 0 chr20 27307360 27307389 -44846493 + AT_rich Low_complexity Low_complexity 1 29 0 1635 186 10 16 chr20 27308265 27308572 -44845310 + AluJb SINE Alu 1 305 -7 242 179 18 0 chr20 27309196 27309252 -44844630 + (TA)n Simple_repeat Simple_repeat 1 57 0 269 253 8 16 chr20 27309648 27309877 -44844005 + GA-rich Low_complexity Low_complexity 1 227 0 662 298 62 9 chr20 27309914 27310139 -44843743 - MIR SINE MIR -2 260 24 540 306 92 75 chr20 27310157 27310703 -44843179 + L2 LINE L2 1784 2338 -976 329 273 0 0 chr20 27310714 27310791 -44843091 + L2 LINE L2 3231 3307 -6 338 326 45 53 chr20 27310966 27311230 -44842652 + L2 LINE L2 2545 2806 -508 264 337 43 0 chr20 27311476 27311568 -44842314 + L2 LINE L2 3134 3229 -43 1663 175 0 11 chr20 27311674 27311943 -44841939 + AluJb SINE Alu 3 268 -44 245 260 118 31 chr20 27312043 27312170 -44841712 + HAL1b LINE L1 405 542 -806 24 0 0 0 chr20 27312454 27312478 -44841404 + AT_rich Low_complexity Low_complexity 1 24 0 4008 169 46 72 chr20 27312571 27313752 -44840130 + L1MB3 LINE L1 4998 6154 -29 307 278 65 78 chr20 27313776 27314021 -44839861 + L1M4 LINE L1 2278 2519 -3627 566 204 244 6 chr20 27314144 27314320 -44839562 - L1ME3 LINE L1 -6 6156 5939 183 156 0 0 chr20 27314373 27314405 -44839477 + CT-rich Low_complexity Low_complexity 1 32 0 1416 133 14 0 chr20 27314405 27314616 -44839266 - AluSp SINE Alu -19 294 81 294 56 0 0 chr20 27314687 27314723 -44839159 + THE1C LTR MaLR 1 36 -339 925 79 0 0 chr20 27314723 27314849 -44839033 - THE1-int LTR MaLR -29 1551 1426 * 5131 95 32 0 chr20 27314839 27315533 -44838349 + THE1B-int LTR MaLR 865 1580 0 2127 158 8 19 chr20 27315533 27315900 -44837982 + THE1B LTR MaLR 1 363 -1 1014 247 71 33 chr20 27315901 27316568 -44837314 - L1ME3 LINE L1 -480 5684 4994 227 155 35 0 chr20 27316659 27316717 -44837165 + (TATAA)n Simple_repeat Simple_repeat 4 63 0 2209 163 83 39 chr20 27316853 27317361 -44836521 - L1MA9 LINE L1 0 7731 7202 223 200 22 0 chr20 27317364 27317409 -44836473 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 583 147 63 119 chr20 27317423 27317465 -44836417 - L1MA9 LINE L1 -496 7220 7177 23210 34 0 0 chr20 27317465 27321043 -44832839 - L1PA4 LINE L1 -6 6149 2571 583 147 63 119 chr20 27321043 27321168 -44832714 - L1MA9 LINE L1 -539 7177 7063 * 10739 228 42 28 chr20 27321165 27325375 -44828507 - L1MA9 LINE L1 -1306 6259 2265 2083 100 0 0 chr20 27326311 27326580 -44827302 - AluSq SINE Alu -12 301 33 416 313 113 54 chr20 27326882 27327499 -44826383 - L1 LINE L1 -2458 3688 3036 1643 227 37 0 chr20 27327685 27328090 -44825792 + L1MC3 LINE L1 7345 7764 -21 609 323 93 58 chr20 27328128 27328685 -44825197 + L2 LINE L2 2736 3313 0 * 1289 319 106 24 chr20 27328683 27329466 -44824416 - L2 LINE L2 -678 2636 1790 1387 123 0 30 chr20 27329530 27329733 -44824149 + MER107 DNA MER1_type 1 197 0 669 313 0 6 chr20 27330528 27330707 -44823175 - MER8 DNA MER2_type -60 179 2 284 308 82 26 chr20 27330740 27331201 -44822681 + L1M4 LINE L1 2686 3172 -2974 1120 93 0 7 chr20 27331562 27331712 -44822170 - L1PA11 LINE L1 0 6174 6026 43854 50 3 3 chr20 27331726 27333215 -44820667 - L1PA4 LINE L1 -15 6140 4653 2566 50 3 0 chr20 27333215 27333517 -44820365 - AluY SINE Alu -8 303 1 43854 50 3 3 chr20 27333517 27338162 -44815720 - L1PA4 LINE L1 -1502 4653 7 8142 138 24 9 chr20 27338184 27340190 -44813692 - L1PA11 LINE L1 -135 6039 4011 6718 148 18 22 chr20 27340202 27340921 -44812961 + L1P LINE L1 2770 3483 -2663 1901 157 73 20 chr20 27340921 27341277 -44812605 + THE1C LTR MaLR 1 375 0 6718 148 18 22 chr20 27341277 27341776 -44812106 + L1P LINE L1 3483 3983 -2163 258 260 14 27 chr20 27342000 27342073 -44811809 + L2 LINE L2 3134 3205 -67 287 188 0 14 chr20 27342134 27342203 -44811679 + GA-rich Low_complexity Low_complexity 2 69 0 476 286 125 37 chr20 27342736 27343089 -44810793 - L3 LINE CR1 -410 1167 784 823 192 0 0 chr20 27343583 27343713 -44810169 - FLAM_A SINE Alu -3 130 1 282 221 52 13 chr20 27344110 27344152 -44809730 - MER116 DNA Mariner 0 80 41 675 152 40 0 chr20 27344152 27344277 -44809605 + L1MD1 LINE L1 6112 6241 -1 282 221 52 13 chr20 27344277 27344311 -44809571 - MER116 DNA Mariner -39 41 1 332 335 82 41 chr20 27344883 27345247 -44808635 - L3 LINE CR1 -149 1428 1050 2118 219 61 18 chr20 27346406 27346950 -44806932 + L1MC4 LINE L1 7352 7918 -124 2093 136 0 7 chr20 27347319 27347629 -44806253 + AluSg SINE Alu 1 308 -2 335 258 52 108 chr20 27347647 27347860 -44806022 - MIR3 SINE MIR -1 207 7 1254 263 45 53 chr20 27348978 27349465 -44804417 - LTR16C LTR ERVL -4 487 5 202 302 201 34 chr20 27350044 27350842 -44803040 + L2 LINE L2 1936 2866 -448 387 203 6 22 chr20 27350868 27351050 -44802832 + CT-rich Low_complexity Low_complexity 2 180 0 183 114 0 0 chr20 27351073 27351108 -44802774 + (CA)n Simple_repeat Simple_repeat 2 36 0 266 374 74 40 chr20 27351144 27351441 -44802441 + L2 LINE L2 2965 3271 -1 231 36 0 0 chr20 27352499 27352527 -44801355 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1615 181 105 56 chr20 27352893 27353303 -44800579 - MSTB1 LTR MaLR 0 432 3 2495 70 0 0 chr20 27353365 27353666 -44800216 - L1PA8 LINE L1 0 6172 5872 1601 32 0 0 chr20 27353666 27353851 -44800031 + L1PA8 LINE L1 5680 5864 -308 741 242 62 19 chr20 27353851 27354107 -44799775 - LTR16A1 LTR ERVL 0 457 191 223 174 0 43 chr20 27355371 27355440 -44798442 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 689 296 94 32 chr20 27358669 27359041 -44794841 + LTR16C LTR ERVL 97 491 0 270 250 0 0 chr20 27360542 27360606 -44793276 + MIR SINE MIR 81 144 -64 2216 164 86 46 chr20 27361871 27362327 -44791555 - MER101 LTR ERV1 0 474 1 378 350 54 23 chr20 27363159 27363547 -44790335 + L1ME3 LINE L1 5539 5938 -224 22 88 0 0 chr20 27363789 27363846 -44790036 + AT_rich Low_complexity Low_complexity 1 57 0 24 32 0 0 chr20 27363903 27363934 -44789948 + AT_rich Low_complexity Low_complexity 1 31 0 853 241 58 0 chr20 27364278 27364485 -44789397 - MER58A DNA MER1_type -5 219 1 450 291 51 0 chr20 27365002 27365119 -44788763 - L2 LINE L2 -1 3271 3149 208 0 62 0 chr20 27365478 27365510 -44788372 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 21 36 0 0 chr20 27366296 27366324 -44787558 + AT_rich Low_complexity Low_complexity 1 28 0 201 94 0 0 chr20 27366475 27366507 -44787375 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 7716 55 21 0 chr20 27366511 27368097 -44785785 - L1PA5 LINE L1 -2 6152 4549 202 304 29 0 chr20 27369394 27369463 -44784419 + L2 LINE L2 3160 3230 -42 199 364 81 20 chr20 27369491 27369590 -44784292 + L2 LINE L2 3116 3220 -52 252 213 98 0 chr20 27369686 27369747 -44784135 - L3 LINE CR1 -1184 393 327 390 303 30 39 chr20 27369808 27369862 -44784020 - L1ME4a LINE L1 -293 5828 5775 731 74 0 11 chr20 27369862 27369957 -44783925 + L1PA7 LINE L1 6056 6149 -5 390 303 30 39 chr20 27369957 27370136 -44783746 - L1ME4a LINE L1 -346 5775 5597 420 275 28 0 chr20 27370491 27370600 -44783282 + L2 LINE L2 3202 3313 0 240 143 0 0 chr20 27371088 27371130 -44782752 + (CA)n Simple_repeat Simple_repeat 2 43 0 269 200 0 0 chr20 27374610 27374660 -44779222 - L2 LINE L2 0 3272 3223 867 138 26 53 chr20 27374685 27374785 -44779097 + MLT1A1 LTR MaLR 6 102 -263 1998 211 45 79 chr20 27374785 27375357 -44778525 + MLT2B3 LTR ERVL 1 553 -1 867 138 26 53 chr20 27375357 27375408 -44778474 + MLT1A1 LTR MaLR 102 153 -212 3851 198 54 54 chr20 27375453 27375528 -44778354 + L1MA9 LINE L1 5254 5328 -984 1688 85 9 13 chr20 27375528 27375752 -44778130 + AluY SINE Alu 74 296 -15 3851 198 54 54 chr20 27375752 27376705 -44777177 + L1MA9 LINE L1 5327 6282 -30 570 300 141 19 chr20 27376793 27377407 -44776475 - L2 LINE L2 -117 3196 2520 1916 114 73 0 chr20 27377448 27377721 -44776161 + AluSx SINE Alu 2 294 -18 435 279 33 66 chr20 27377936 27378051 -44775831 - MER5A DNA MER1_type -6 183 75 1554 187 19 29 chr20 27378051 27378366 -44775516 - AluJo SINE Alu 0 312 1 435 279 33 66 chr20 27378366 27378433 -44775449 - MER5A DNA MER1_type -114 75 7 317 315 84 0 chr20 27380320 27380463 -44773419 + L2 LINE L2 2098 2252 -1062 255 318 26 71 chr20 27382036 27382190 -44771692 - MIR SINE MIR -92 170 24 214 195 0 0 chr20 27384317 27384358 -44769524 + GA-rich Low_complexity Low_complexity 2 42 0 193 292 31 31 chr20 27386183 27386279 -44767603 + MIR SINE MIR 133 228 -34 238 341 116 8 chr20 27386685 27386767 -44767115 + MIR SINE MIR 39 141 -121 372 22 0 0 chr20 27386767 27386812 -44767070 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 238 341 116 8 chr20 27386812 27386858 -44767024 + MIR SINE MIR 141 181 -81 248 307 23 0 chr20 27386919 27387007 -44766875 - MARNA DNA Mariner -400 186 97 308 208 0 14 chr20 27387564 27387636 -44766246 - MLT1K LTR MaLR -343 245 175 3297 45 0 5 chr20 27388693 27389074 -44764808 - L1PA5 LINE L1 -1 6153 5775 2593 49 0 0 chr20 27389074 27389381 -44764501 + L1PA5 LINE L1 5476 5782 -373 416 339 47 6 chr20 27390045 27390216 -44763666 - MIR SINE MIR -82 180 3 2643 143 71 22 chr20 27390247 27390751 -44763131 - L1MB7 LINE L1 -19 6165 5637 21 36 0 0 chr20 27390751 27390779 -44763103 + AT_rich Low_complexity Low_complexity 1 28 0 191 309 62 31 chr20 27390808 27390905 -44762977 - L2 LINE L2 -5 3308 3209 516 317 101 59 chr20 27391246 27392039 -44761843 - L2 LINE L2 0 3272 2443 1346 280 132 0 chr20 27392050 27392453 -44761429 + LTR16C LTR ERVL 33 488 -3 254 288 243 32 chr20 27392531 27392844 -44761038 - L2 LINE L2 -909 2405 2027 21 36 0 0 chr20 27393222 27393250 -44760632 + AT_rich Low_complexity Low_complexity 1 28 0 284 333 67 0 chr20 27393928 27394033 -44759849 + MIR SINE MIR 29 140 -122 287 260 14 0 chr20 27394079 27394152 -44759730 + MER116 DNA Mariner 6 79 -1 388 271 14 28 chr20 27394294 27394438 -44759444 + CT-rich Low_complexity Low_complexity 1 142 0 193 286 65 0 chr20 27394523 27394600 -44759282 + MIR SINE MIR 111 192 -70 199 347 28 28 chr20 27394797 27394869 -44759013 + MIR SINE MIR 82 153 -55 230 273 0 0 chr20 27394949 27395004 -44758878 + L1P4 LINE L1 5693 5747 -414 337 268 112 64 chr20 27395021 27395316 -44758566 + L1ME4a LINE L1 5790 6098 -23 280 245 47 28 chr20 27397167 27397273 -44756609 + L1ME4a LINE L1 5837 5944 -177 264 292 133 71 chr20 27397471 27397697 -44756185 + L2 LINE L2 3033 3272 0 186 325 64 45 chr20 27398374 27398531 -44755351 - MER5A DNA MER1_type -28 161 2 189 311 151 57 chr20 27399250 27399356 -44754526 + MIR SINE MIR 16 131 -77 351 0 0 0 chr20 27400018 27400057 -44753825 + (CA)n Simple_repeat Simple_repeat 2 40 0 201 108 0 0 chr20 27400893 27400930 -44752952 + (A)n Simple_repeat Simple_repeat 1 37 0 554 271 96 39 chr20 27401963 27402192 -44751690 - MIR SINE MIR 0 262 21 284 180 16 16 chr20 27402238 27402299 -44751583 - MIR SINE MIR -125 137 77 387 317 12 12 chr20 27403912 27404079 -44749803 - LTR33 LTR ERVL 0 521 355 472 232 96 43 chr20 27404085 27404306 -44749576 - MLT1E1 LTR MaLR -272 321 57 734 253 78 55 chr20 27404592 27404936 -44748946 - LTR16A LTR ERVL -81 369 18 217 217 0 22 chr20 27405619 27405665 -44748217 + GA-rich Low_complexity Low_complexity 2 46 0 184 343 27 0 chr20 27406397 27406470 -44747412 - L2 LINE L2 0 3313 3239 2107 108 3 7 chr20 27406526 27406968 -44746914 + AluSq SINE Alu 1 441 0 385 49 16 16 chr20 27407006 27407067 -44746815 + (GAAA)n Simple_repeat Simple_repeat 3 63 0 201 315 41 0 chr20 27407113 27407186 -44746696 - L2 LINE L2 -227 3086 3011 223 273 136 0 chr20 27407187 27407253 -44746629 - MIR SINE MIR -61 147 73 217 233 0 0 chr20 27407514 27407557 -44746325 + GA-rich Low_complexity Low_complexity 3 45 0 474 252 79 0 chr20 27409230 27409357 -44744525 - MER5B DNA MER1_type -39 139 3 188 217 65 0 chr20 27409423 27409469 -44744413 + L2 LINE L2 3018 3066 -206 423 326 13 35 chr20 27410148 27410375 -44743507 + MIR SINE MIR 31 252 -10 328 320 0 0 chr20 27411092 27411192 -44742690 + (TG)n Simple_repeat Simple_repeat 1 100 0 645 263 68 19 chr20 27411207 27411412 -44742470 - LTR16C LTR ERVL 0 491 277 2264 103 3 3 chr20 27411432 27411733 -44742149 + AluSq SINE Alu 1 301 -12 523 78 0 13 chr20 27412873 27412950 -44740932 + Alu SINE Alu 229 304 -5 465 185 11 0 chr20 27412960 27413052 -44740830 - MER63 DNA MER1_type -829 232 140 4468 162 56 8 chr20 27413057 27413179 -44740703 - L1MA9 LINE L1 -4 6287 6172 204 40 0 0 chr20 27413179 27413204 -44740678 + (TG)n Simple_repeat Simple_repeat 2 26 0 4468 162 56 8 chr20 27413204 27414263 -44739619 - L1MA9 LINE L1 -119 6172 5039 281 128 43 0 chr20 27414282 27414329 -44739553 - MER63 DNA MER1_type -1002 59 11 1459 218 4 0 chr20 27414334 27414591 -44739291 + Tigger7 DNA MER2_type 2 259 -2228 429 225 11 0 chr20 27414592 27414681 -44739201 + Tigger7 DNA MER2_type 2398 2487 0 499 252 14 14 chr20 27414953 27415092 -44738790 + MIR SINE MIR 99 237 -25 438 306 9 0 chr20 27415170 27415281 -44738601 - MIR SINE MIR -69 193 82 294 320 0 0 chr20 27415555 27415677 -44738205 - L1MC4 LINE L1 -3 8039 7918 600 235 231 8 chr20 27415962 27416217 -44737665 - MER46C DNA MER2_type -16 322 11 1919 108 12 0 chr20 27416602 27416893 -44736989 + AluSx SINE Alu 21 314 0 200 114 0 29 chr20 27418683 27418718 -44735164 + (TTTTC)n Simple_repeat Simple_repeat 4 37 0 22 0 0 0 chr20 27420940 27420962 -44732920 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 27421071 27421108 -44732774 + AT_rich Low_complexity Low_complexity 1 37 0 1882 165 81 43 chr20 27421891 27422333 -44731549 + L1MB7 LINE L1 5717 6175 -9 191 311 194 29 chr20 27422560 27422663 -44731219 - L2 LINE L2 -49 3223 3104 217 359 107 39 chr20 27422821 27423205 -44730677 + L3 LINE CR1 787 1196 -381 567 321 58 33 chr20 27423243 27423483 -44730399 - MIR SINE MIR -15 247 2 214 356 0 0 chr20 27423598 27423657 -44730225 + L3 LINE CR1 1433 1491 -86 403 341 0 33 chr20 27423741 27423923 -44729959 + MER91B DNA MER1_type 1 176 -14 203 307 86 14 chr20 27424112 27424252 -44729630 - L2 LINE L2 -1042 2272 2123 180 326 132 44 chr20 27424331 27424558 -44729324 - L2 LINE L2 -1363 1951 1705 311 311 87 37 chr20 27425650 27425949 -44727933 - L1ME LINE L1 -312 5809 5496 263 240 0 66 chr20 27426121 27426242 -44727640 - L1ME LINE L1 -2442 5366 5254 336 261 104 71 chr20 27426487 27426722 -44727160 - L1ME LINE L1 -1167 4979 4732 263 53 0 0 chr20 27427423 27427461 -44726421 + L1HS LINE L1 6114 6151 -4 299 276 166 31 chr20 27427582 27427745 -44726137 + MIR3 SINE MIR 15 199 -9 370 214 155 0 chr20 27427884 27427987 -44725895 + L2 LINE L2 3153 3271 -1 24 32 0 0 chr20 27430016 27430047 -44723835 + AT_rich Low_complexity Low_complexity 1 31 0 345 201 39 25 chr20 27430552 27430699 -44723183 - L1ME4a LINE L1 -161 5960 5812 1716 255 13 4 chr20 27432881 27433356 -44720526 - L1MA9 LINE L1 -38 6274 5796 658 117 0 0 chr20 27433357 27433451 -44720431 + AluSc SINE Alu 1 94 -215 1662 188 9 6 chr20 27433452 27433792 -44720090 - L1MA9 LINE L1 -530 5782 5442 1967 151 0 10 chr20 27433878 27434176 -44719706 - AluJb SINE Alu -17 295 1 188 65 0 32 chr20 27434953 27434984 -44718898 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 189 0 0 0 chr20 27437591 27437612 -44716270 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 183 42 0 0 chr20 27438508 27438532 -44715350 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 231 36 0 0 chr20 27438826 27438854 -44715028 + (CA)n Simple_repeat Simple_repeat 2 29 0 1825 184 6 3 chr20 27439673 27440010 -44713872 - MER7A DNA MER2_type -8 338 3 454 185 37 0 chr20 27440437 27440545 -44713337 + MER103 DNA DNA 10 121 -45 312 27 0 0 chr20 27440993 27441030 -44712852 + (GA)n Simple_repeat Simple_repeat 2 38 0 261 286 42 0 chr20 27441459 27441578 -44712304 - L1MC4a LINE L1 -1800 6008 5885 988 247 67 19 chr20 27442670 27442986 -44710896 + MLT1H LTR MaLR 4 334 -215 649 274 90 38 chr20 27442996 27443284 -44710598 - L2 LINE L2 -1235 2079 1777 1706 221 48 76 chr20 27443614 27443981 -44709901 + L1MC4 LINE L1 7323 7668 -374 1074 144 0 0 chr20 27443981 27444161 -44709721 + (TA)n Simple_repeat Simple_repeat 1 180 0 1706 221 48 76 chr20 27444161 27444399 -44709483 + L1MC4 LINE L1 7668 7911 -131 1406 248 55 43 chr20 27444400 27445003 -44708879 + MLT1E3 LTR MaLR 9 619 -5 433 219 9 0 chr20 27445010 27445124 -44708758 + L1MC4 LINE L1 7927 8041 -1 279 0 0 0 chr20 27445139 27445170 -44708712 + (TA)n Simple_repeat Simple_repeat 2 32 0 573 295 67 13 chr20 27445171 27445395 -44708487 - MIR SINE MIR -24 238 3 2143 120 3 10 chr20 27445515 27445814 -44708068 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 27446397 27446418 -44707464 + AT_rich Low_complexity Low_complexity 1 21 0 261 372 16 23 chr20 27447707 27447836 -44706046 + L2 LINE L2 3145 3272 0 392 266 203 0 chr20 27448065 27448128 -44705754 + MIR SINE MIR 36 85 -177 186 71 0 0 chr20 27448128 27448156 -44705726 + (TTA)n Simple_repeat Simple_repeat 3 30 0 392 266 203 0 chr20 27448156 27448269 -44705613 + MIR SINE MIR 85 248 -14 208 267 93 35 chr20 27448276 27448362 -44705520 + MIR SINE MIR 64 154 -108 468 240 73 22 chr20 27448781 27448960 -44704922 + LTR16A1 LTR ERVL 269 456 -1 376 333 23 0 chr20 27449293 27449425 -44704457 - MIR SINE MIR -70 192 58 215 217 43 0 chr20 27449518 27449564 -44704318 + MER5A DNA MER1_type 47 94 -95 746 176 25 0 chr20 27449631 27449750 -44704132 + FLAM_A SINE Alu 1 122 -11 235 200 15 15 chr20 27449835 27449900 -44703982 + (TA)n Simple_repeat Simple_repeat 2 66 0 339 96 0 0 chr20 27450221 27450273 -44703609 + (TG)n Simple_repeat Simple_repeat 2 53 0 546 222 49 0 chr20 27450273 27450417 -44703465 - LTR16C LTR ERVL -2 489 339 349 317 99 41 chr20 27454668 27454961 -44698921 + MLT1I LTR MaLR 79 388 -21 203 0 37 0 chr20 27455949 27455976 -44697906 + (TG)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr20 27456524 27456547 -44697335 + AT_rich Low_complexity Low_complexity 1 23 0 584 218 0 15 chr20 27456812 27456945 -44696937 - L1PB4 LINE L1 -14 6142 6012 282 301 14 0 chr20 27457488 27457561 -44696321 + Charlie8 DNA MER1_type 1 74 -2343 189 0 0 0 chr20 27457562 27457583 -44696299 + (TTAAA)n Simple_repeat Simple_repeat 2 22 0 3778 171 9 3 chr20 27458158 27458852 -44695030 - L1MB3 LINE L1 -2 6181 5484 258 143 0 0 chr20 27458867 27458916 -44694966 + (TG)n Simple_repeat Simple_repeat 2 50 0 1138 260 52 3 chr20 27458947 27459313 -44694569 - L1MB3 LINE L1 -1071 5075 4692 8298 240 53 29 chr20 27459326 27460979 -44692903 - L1M4 LINE L1 -745 5637 3866 2259 98 10 3 chr20 27460979 27461284 -44692598 - AluSx SINE Alu -5 307 1 8298 240 53 29 chr20 27461284 27462762 -44691120 - L1M4 LINE L1 -2516 3866 2426 232 121 193 0 chr20 27462866 27462949 -44690933 - L1M4 LINE L1 -4030 2354 2256 9859 205 25 29 chr20 27462988 27463792 -44690090 - L1PA16 LINE L1 -9 6157 5351 2147 112 10 3 chr20 27463792 27464087 -44689795 - AluSg SINE Alu -11 299 3 9859 205 25 29 chr20 27464087 27465657 -44688225 - L1PA16 LINE L1 -815 5351 3797 386 91 212 0 chr20 27465657 27465723 -44688159 + MADE1 DNA Mariner 1 80 0 9859 205 25 29 chr20 27465723 27466933 -44686949 - L1PA16 LINE L1 -2369 3797 2583 1313 240 9 7 chr20 27466923 27467510 -44686372 - L1M4 LINE L1 -4119 2265 1585 * 1905 216 144 54 chr20 27467515 27468145 -44685737 - MER21B LTR ERV1 -157 706 20 319 237 13 13 chr20 27468168 27468244 -44685638 - MER21B LTR ERV1 -773 90 15 25 31 0 0 chr20 27468370 27468402 -44685480 + AT_rich Low_complexity Low_complexity 1 32 0 502 260 219 0 chr20 27468657 27468803 -44685079 + MER5A DNA MER1_type 9 186 -3 283 242 197 0 chr20 27469191 27469289 -44684593 + MIR3 SINE MIR 48 158 -50 202 268 122 24 chr20 27469533 27469656 -44684226 - MIR SINE MIR -42 220 86 236 364 43 6 chr20 27470097 27470259 -44683623 - MIR3 SINE MIR -6 202 35 186 188 0 0 chr20 27471697 27471729 -44682153 - L3 LINE CR1 -738 839 808 783 208 18 0 chr20 27472946 27473114 -44680768 + MER58B DNA MER1_type 171 341 0 481 293 61 35 chr20 27473496 27473694 -44680188 - MIR SINE MIR -25 237 35 313 273 34 0 chr20 27473915 27474003 -44679879 + MIR SINE MIR 72 162 -100 334 259 273 7 chr20 27475021 27475160 -44678722 - MER5A DNA MER1_type -5 184 9 192 158 53 123 chr20 27476164 27476221 -44677661 - MIR3 SINE MIR -45 163 111 214 182 0 23 chr20 27476612 27476656 -44677226 - MIR SINE MIR -98 164 122 340 250 0 0 chr20 27477102 27477182 -44676700 + MER116 DNA Mariner 1 80 0 1247 220 115 19 chr20 27477631 27477781 -44676101 - Charlie1b DNA MER1_type -2238 523 389 1954 122 11 0 chr20 27477781 27478091 -44675791 + AluSx SINE Alu 1 313 0 1247 220 115 19 chr20 27478091 27478416 -44675466 - Charlie1b DNA MER1_type -2372 389 1 196 128 106 64 chr20 27478473 27478520 -44675362 - MER5B DNA MER1_type -129 49 1 396 0 0 0 chr20 27479193 27479237 -44674645 + (CA)n Simple_repeat Simple_repeat 1 44 0 2047 112 0 4 chr20 27479279 27479557 -44674325 + AluSg SINE Alu 1 277 -33 389 36 18 0 chr20 27479557 27479612 -44674270 + (CAAAA)n Simple_repeat Simple_repeat 1 56 0 199 330 155 0 chr20 27479839 27479942 -44673940 + L2 LINE L2 3141 3259 -13 225 0 0 0 chr20 27479943 27479968 -44673914 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 288 0 0 0 chr20 27480087 27480119 -44673763 + (TG)n Simple_repeat Simple_repeat 2 33 0 207 229 0 0 chr20 27480383 27480444 -44673438 + (TG)n Simple_repeat Simple_repeat 1 61 0 575 254 161 19 chr20 27480446 27480753 -44673129 - L1MC4 LINE L1 -97 7711 7453 1715 115 64 45 chr20 27481293 27481605 -44672277 - L1MC2 LINE L1 -9 6335 6018 867 189 59 13 chr20 27481611 27481764 -44672118 + FRAM SINE Alu 6 165 -11 2501 158 18 47 chr20 27481769 27482264 -44671618 - L1MC2 LINE L1 -316 6028 5548 743 229 251 3 chr20 27482296 27482619 -44671263 - LTR50 LTR ERVL -390 405 3 25 31 0 0 chr20 27483721 27483753 -44670129 + AT_rich Low_complexity Low_complexity 1 32 0 2134 204 28 9 chr20 27483964 27484482 -44669400 - L1MA9 LINE L1 -138 6196 5668 242 290 97 21 chr20 27484740 27484796 -44669086 + L2 LINE L2 3202 3269 -44 1012 241 156 30 chr20 27484796 27485232 -44668650 + MER110 LTR ERV1 1 491 0 242 290 97 21 chr20 27485232 27485268 -44668614 + L2 LINE L2 3269 3301 -12 441 307 7 7 chr20 27485340 27485477 -44668405 + MIR SINE MIR 56 192 -70 260 273 8 0 chr20 27486387 27486519 -44667363 + GA-rich Low_complexity Low_complexity 3 135 0 * 282 125 0 0 chr20 27486508 27486556 -44667326 + (GGGA)n Simple_repeat Simple_repeat 2 49 0 2094 98 70 0 chr20 27487200 27487485 -44666397 - AluSx SINE Alu -7 305 1 390 139 14 14 chr20 27488777 27488849 -44665033 - MER58 DNA MER1_type -31 2389 2318 241 292 31 21 chr20 27488851 27488947 -44664935 - MER58 DNA MER1_type -238 103 7 347 314 59 29 chr20 27489382 27489586 -44664296 - L2 LINE L2 0 3313 3104 338 270 18 18 chr20 27490415 27490526 -44663356 + MIR SINE MIR 25 135 -127 391 252 98 42 chr20 27490587 27490730 -44663152 + MER5B DNA MER1_type 25 175 -3 929 151 0 6 chr20 27491980 27492139 -44661743 - L1MA7 LINE L1 0 6291 6134 742 133 33 53 chr20 27492157 27492307 -44661575 - L1MA7 LINE L1 -243 6048 5902 * 3513 155 13 24 chr20 27492303 27492707 -44661175 + L1MA7 LINE L1 5087 5494 -797 2184 127 0 16 chr20 27492707 27493022 -44660860 + AluSx SINE Alu 1 310 -2 3513 155 13 24 chr20 27493022 27493451 -44660431 + L1MA7 LINE L1 5494 5911 -380 2393 150 25 3 chr20 27493555 27493909 -44659973 - THE1B LTR MaLR 0 364 3 942 35 0 0 chr20 27494656 27494770 -44659112 + (TA)n Simple_repeat Simple_repeat 2 115 0 1885 126 28 3 chr20 27494770 27495056 -44658826 - AluSx SINE Alu -19 293 1 233 277 59 20 chr20 27495286 27495387 -44658495 + MER5B DNA MER1_type 70 174 -4 * 251 335 161 7 chr20 27495370 27495525 -44658357 - MIR3 SINE MIR -19 189 11 188 194 28 0 chr20 27499750 27499786 -44654096 - L2 LINE L2 -20 3252 3216 303 281 55 16 chr20 27499789 27499917 -44653965 - MIR SINE MIR -89 173 41 228 35 0 0 chr20 27500068 27500097 -44653785 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 306 294 289 0 chr20 27501206 27501441 -44652441 - Charlie2 DNA MER1_type -2559 303 1 495 299 76 5 chr20 27501976 27502173 -44651709 - MIR SINE MIR -12 250 40 256 291 45 9 chr20 27502389 27502499 -44651383 - L2 LINE L2 -14 3299 3186 185 191 0 21 chr20 27503059 27503106 -44650776 + CT-rich Low_complexity Low_complexity 2 47 0 741 181 42 0 chr20 27503238 27503382 -44650500 + MLT1B LTR MaLR 240 389 -1 751 258 67 0 chr20 27503388 27503597 -44650285 - L1MC4a LINE L1 -966 6842 6620 1856 147 27 0 chr20 27504540 27504839 -44649043 + AluJb SINE Alu 1 307 -5 2078 113 0 35 chr20 27505042 27505360 -44648522 - AluSx SINE Alu -5 307 1 292 267 86 9 chr20 27506115 27506220 -44647662 - MER5B DNA MER1_type 0 178 66 181 222 32 0 chr20 27506376 27506439 -44647443 + GA-rich Low_complexity Low_complexity 2 66 0 217 229 49 16 chr20 27506606 27506667 -44647215 - MIR SINE MIR -172 90 28 188 200 18 0 chr20 27507386 27507441 -44646441 + CT-rich Low_complexity Low_complexity 1 56 0 418 219 102 7 chr20 27507655 27507792 -44646090 + L1ME3A LINE L1 6020 6169 -1 186 304 43 33 chr20 27507870 27507962 -44645920 - MIR SINE MIR -131 131 39 1264 240 133 7 chr20 27508779 27509200 -44644682 - L1MC4 LINE L1 -209 7833 7360 275 49 24 0 chr20 27510043 27510084 -44643798 + (TG)n Simple_repeat Simple_repeat 1 42 0 2269 133 80 0 chr20 27510234 27510571 -44643311 + THE1B LTR MaLR 1 364 0 26 30 0 0 chr20 27511294 27511327 -44642555 + AT_rich Low_complexity Low_complexity 1 33 0 208 241 11 81 chr20 27511655 27511742 -44642140 + MER5A DNA MER1_type 91 171 -18 449 261 0 27 chr20 27511962 27512073 -44641809 - MER8 DNA MER2_type -126 113 6 24 32 0 0 chr20 27512213 27512244 -44641638 + AT_rich Low_complexity Low_complexity 1 31 0 2049 140 0 31 chr20 27512439 27512760 -44641122 + AluJb SINE Alu 1 311 -1 25 0 0 0 chr20 27513019 27513044 -44640838 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr20 27513197 27513232 -44640650 + AT_rich Low_complexity Low_complexity 1 35 0 634 299 62 61 chr20 27513763 27513956 -44639926 + L1ME3A LINE L1 4747 4938 -1232 1621 206 30 43 chr20 27513956 27514324 -44639558 - MLT1A1 LTR MaLR -2 363 1 634 299 62 61 chr20 27514324 27515288 -44638594 + L1ME3A LINE L1 4938 5889 -281 21 0 0 0 chr20 27515596 27515617 -44638265 + AT_rich Low_complexity Low_complexity 1 21 0 462 301 53 29 chr20 27517788 27517997 -44635885 + MIR SINE MIR 23 236 -26 488 329 151 19 chr20 27518511 27518836 -44635046 - L2 LINE L2 0 3313 2946 786 227 38 108 chr20 27519949 27520134 -44633748 + MER5A DNA MER1_type 2 173 -5 619 366 133 29 chr20 27520327 27520665 -44633217 + L3 LINE CR1 445 746 -831 198 0 0 0 chr20 27520665 27520687 -44633195 + (TA)n Simple_repeat Simple_repeat 2 23 0 619 366 133 29 chr20 27520687 27521309 -44632573 + L3 LINE CR1 746 1505 -72 209 178 67 0 chr20 27521418 27521463 -44632419 - L2 LINE L2 -15 3257 3210 * 981 218 64 0 chr20 27521429 27521649 -44632233 - MIR SINE MIR -21 241 8 189 121 0 0 chr20 27521733 27521766 -44632116 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 194 313 141 0 chr20 27522118 27522182 -44631700 + L3 LINE CR1 501 573 -1004 4003 158 20 16 chr20 27522377 27523079 -44630803 + L1MB3 LINE L1 5476 6180 -3 4437 33 0 0 chr20 27523086 27523607 -44630275 - L1PA3 LINE L1 -879 5267 4747 7614 28 19 0 chr20 27523607 27524460 -44629422 + L1PA3 LINE L1 5286 6154 -1 210 37 0 0 chr20 27524480 27524507 -44629375 + (A)n Simple_repeat Simple_repeat 1 27 0 1271 189 40 4 chr20 27524516 27524744 -44629138 + MER46A DNA MER2_type 1 236 0 2281 72 0 36 chr20 27525528 27525834 -44628048 + AluY SINE Alu 2 296 -15 391 175 0 0 chr20 27527609 27527672 -44626210 - MER3 DNA MER1_type -2 207 145 2438 124 16 32 chr20 27527776 27528146 -44625736 - THE1B LTR MaLR 0 364 1 552 211 23 23 chr20 27528162 27528290 -44625592 - MER3 DNA MER1_type -81 128 1 246 329 49 12 chr20 27528290 27528372 -44625510 - MIR SINE MIR -93 169 85 323 339 30 24 chr20 27528960 27529125 -44624757 + LTR16C LTR ERVL 1 166 -325 500 322 38 28 chr20 27529172 27529294 -44624588 + LTR16C LTR ERVL 246 372 -119 2527 114 5 40 chr20 27529294 27529671 -44624211 - THE1B LTR MaLR 0 364 1 500 322 38 28 chr20 27529671 27529759 -44624123 + LTR16C LTR ERVL 372 458 -33 186 374 114 8 chr20 27529892 27530023 -44623859 - MIR SINE MIR -67 195 51 183 80 0 0 chr20 27530271 27530296 -44623586 + (T)n Simple_repeat Simple_repeat 1 25 0 1839 186 32 18 chr20 27631741 27632080 -44521802 + MER2 DNA MER2_type 1 344 0 232 228 105 9 chr20 27632534 27632648 -44521234 - Charlie7 DNA MER1_type -51 2561 2437 * 347 188 10 89 chr20 27632621 27632722 -44521160 - Charlie7 DNA MER1_type -2498 114 22 22 0 0 0 chr20 27633676 27633698 -44520184 + AT_rich Low_complexity Low_complexity 1 22 0 1674 177 23 19 chr20 27633738 27634048 -44519834 - AluJo SINE Alu -1 311 1 1663 176 7 10 chr20 27634665 27634966 -44518916 - AluJb SINE Alu -12 300 1 311 290 64 24 chr20 27635842 27636008 -44517874 + LTR16B LTR ERVL 264 450 -2 222 37 0 0 chr20 27639226 27639253 -44514629 + (TG)n Simple_repeat Simple_repeat 2 28 0 331 343 76 17 chr20 27641431 27641667 -44512215 - L3 LINE CR1 -1120 457 208 295 238 36 0 chr20 27643000 27643084 -44510798 + L2 LINE L2 3226 3312 -1 1339 301 31 0 chr20 27643966 27644358 -44509524 - LTR16C LTR ERVL 0 491 88 393 281 194 29 chr20 27647739 27648156 -44505726 + L2 LINE L2 2369 2854 -460 414 293 105 68 chr20 27648219 27648646 -44505236 + L2 LINE L2 2871 3313 0 235 285 89 28 chr20 27648676 27648855 -44505027 - L1P5 LINE L1 -692 5459 5270 512 257 112 57 chr20 27649131 27649621 -44504261 + L1MC5 LINE L1 7261 7777 -184 330 26 0 0 chr20 27649924 27649963 -44503919 + (TG)n Simple_repeat Simple_repeat 2 40 0 1396 174 8 12 chr20 27650357 27650599 -44503283 + AluJo SINE Alu 1 241 -71 182 37 37 0 chr20 27650600 27650627 -44503255 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 485 192 102 4 chr20 27650717 27650859 -44503023 + MER33 DNA MER1_type 37 164 -2460 413 0 39 0 chr20 27650859 27650911 -44502971 + (TTTTA)n Simple_repeat Simple_repeat 4 57 0 1909 129 4 4 chr20 27650911 27651191 -44502691 - AluSx SINE Alu -32 280 1 485 192 102 4 chr20 27651191 27651272 -44502610 + MER33 DNA MER1_type 163 363 0 518 289 103 92 chr20 27651466 27652091 -44501791 - HAL1 LINE L1 -1014 1493 859 2376 69 0 25 chr20 27652091 27652410 -44501472 - AluY SINE Alu 0 311 1 518 289 103 92 chr20 27652410 27652427 -44501455 - HAL1 LINE L1 -1648 859 844 218 405 8 8 chr20 27652820 27652951 -44500931 + L2 LINE L2 2961 3091 -181 290 149 0 0 chr20 27653162 27653209 -44500673 + L1MA5 LINE L1 6250 6296 -4 189 0 0 0 chr20 27653532 27653553 -44500329 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1062 306 50 3 chr20 27654093 27654436 -44499446 - LTR16C LTR ERVL -31 460 102 22 99 0 0 chr20 27654522 27654593 -44499289 + AT_rich Low_complexity Low_complexity 1 71 0 240 339 34 51 chr20 27654809 27654986 -44498896 + MIR3 SINE MIR 30 203 -5 234 0 0 0 chr20 27655254 27655280 -44498602 + (T)n Simple_repeat Simple_repeat 1 26 0 247 130 37 0 chr20 27655416 27655470 -44498412 - L1MB2 LINE L1 -2 6169 6114 * 604 157 10 0 chr20 27655465 27655567 -44498315 - L1MB2 LINE L1 -345 5838 5736 217 298 0 0 chr20 27655763 27655820 -44498062 - MIR SINE MIR -6 256 200 1804 175 21 6 chr20 27655846 27656177 -44497705 + L1MA5 LINE L1 5965 6300 0 22 35 0 0 chr20 27656995 27657024 -44496858 + AT_rich Low_complexity Low_complexity 1 29 0 244 277 121 7 chr20 27657586 27657727 -44496155 - LTR16A LTR ERVL -188 262 106 2444 231 63 27 chr20 27658891 27659513 -44494369 + MER82 DNA MER2_type 9 652 -1 328 296 119 57 chr20 27659936 27660254 -44493628 - L1MC4a LINE L1 -1925 5883 5546 353 234 137 24 chr20 27660438 27660562 -44493320 + MIR SINE MIR 101 238 -24 692 110 0 8 chr20 27661751 27661869 -44492013 + (TAGA)n Simple_repeat Simple_repeat 2 118 0 26 0 0 0 chr20 27661889 27661915 -44491967 + AT_rich Low_complexity Low_complexity 1 26 0 406 254 18 27 chr20 27664174 27664284 -44489598 + MER5A DNA MER1_type 39 147 -42 649 250 45 35 chr20 27664294 27664630 -44489252 + LTR16A LTR ERVL 21 420 -30 731 254 141 71 chr20 27665083 27665517 -44488365 + MLT1F1 LTR MaLR 37 541 -8 195 246 0 0 chr20 27665586 27665643 -44488239 + (TA)n Simple_repeat Simple_repeat 2 58 0 1766 115 4 4 chr20 27665939 27666183 -44487699 + AluSq SINE Alu 1 244 -69 1641 202 25 27 chr20 27666316 27666683 -44487199 - MLT1A2 LTR MaLR -8 366 1 198 128 128 21 chr20 27667215 27667262 -44486620 - MIR SINE MIR -136 72 21 215 178 0 22 chr20 27668160 27668205 -44485677 + (TA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr20 27668709 27668730 -44485152 + AT_rich Low_complexity Low_complexity 1 21 0 356 317 6 18 chr20 27668813 27668980 -44484902 + (TATG)n Simple_repeat Simple_repeat 3 167 0 309 344 85 68 chr20 27669233 27669657 -44484225 - L2 LINE L2 0 3272 2842 225 240 0 0 chr20 27670378 27670453 -44483429 + (TG)n Simple_repeat Simple_repeat 2 76 0 21 0 0 0 chr20 27670952 27670973 -44482909 + AT_rich Low_complexity Low_complexity 1 21 0 250 286 10 0 chr20 27671151 27671249 -44482633 - LTR33 LTR ERVL -115 406 308 407 244 173 19 chr20 27671299 27671455 -44482427 - LTR33 LTR ERVL -300 221 42 511 359 49 11 chr20 27671777 27672145 -44481737 - LTR16B LTR ERVL -7 457 76 1831 257 74 4 chr20 27673072 27673531 -44480351 - MER110 LTR ERV1 0 491 1 2902 143 31 4 chr20 27673608 27674091 -44479791 - L1MC3 LINE L1 -1 7784 7289 1933 159 28 0 chr20 27674091 27674412 -44479470 - MER46B DNA MER2_type 0 236 32 583 179 36 0 chr20 27674429 27674541 -44479341 - L1MC3 LINE L1 -495 7290 7175 240 313 0 0 chr20 27674541 27674608 -44479274 - MLT1F1 LTR MaLR -456 111 45 2214 171 16 25 chr20 27674608 27675047 -44478835 - L1MC3 LINE L1 -678 7107 6673 2364 138 44 20 chr20 27675266 27675427 -44478455 + MSTA LTR MaLR 13 169 -259 2132 110 0 7 chr20 27675427 27675739 -44478143 - AluSq SINE Alu 0 313 1 2364 138 44 20 chr20 27675739 27675983 -44477899 + MSTA LTR MaLR 169 428 0 2174 177 52 55 chr20 27677302 27677721 -44476161 - MER47B DNA MER2_type 0 418 1 1686 260 43 9 chr20 27677827 27678289 -44475593 + MER110 LTR ERV1 14 491 0 1078 249 73 18 chr20 27680797 27681179 -44472703 + L1ME3A LINE L1 5759 6161 -9 322 314 25 8 chr20 27682319 27682440 -44471442 - L2 LINE L2 -1 3271 3149 2106 217 26 12 chr20 27682963 27683387 -44470495 - MER63C DNA MER1_type -255 675 246 289 294 34 34 chr20 27683272 27683418 -44470464 + MER63C DNA MER1_type 244 389 -541 * 1935 133 0 31 chr20 27683441 27683734 -44470148 + AluSx SINE Alu 1 284 -28 200 188 0 0 chr20 27884233 27884265 -44269617 + polypurine Low_complexity Low_complexity 5 36 0 319 290 11 0 chr20 27884670 27884763 -44269119 - MER117 DNA MER1_type -53 144 51 483 273 102 57 chr20 27885100 27885434 -44268448 + LTR16A1 LTR ERVL 98 423 -34 247 316 13 0 chr20 27886158 27886234 -44267648 - MARNA DNA Mariner -42 544 468 1850 204 31 60 chr20 27887284 27887804 -44266078 - MLT1D LTR MaLR 0 505 1 13426 141 13 4 chr20 27887869 27890082 -44263800 + L1PA11 LINE L1 2706 4938 -1208 6304 87 22 15 chr20 27890083 27891031 -44262851 + L1PA11 LINE L1 5217 6170 -4 493 215 57 96 chr20 27891593 27891802 -44262080 - LTR16A1 LTR ERVL -13 444 244 390 57 0 0 chr20 27892418 27892471 -44261411 + (CA)n Simple_repeat Simple_repeat 2 54 0 294 239 76 43 chr20 27893016 27893108 -44260774 - MLT1J LTR MaLR 0 511 417 455 307 36 26 chr20 27893255 27893447 -44260435 - MLT1J LTR MaLR -317 194 1 663 266 82 30 chr20 27893689 27893994 -44259888 + LTR16A LTR ERVL 117 437 -13 258 223 147 58 chr20 27894215 27894378 -44259504 + MIR SINE MIR 6 201 -61 628 229 42 57 chr20 27894829 27895021 -44258861 + MER5A DNA MER1_type 1 189 0 253 286 14 0 chr20 27895091 27895161 -44258721 + CT-rich Low_complexity Low_complexity 2 72 0 2198 127 0 0 chr20 27895786 27896093 -44257789 + AluSx SINE Alu 1 307 -5 3571 206 83 19 chr20 27896885 27897747 -44256135 - L1MD1 LINE L1 -20 6222 5305 737 139 33 0 chr20 27897751 27897873 -44256009 - AluSg/x SINE Alu -18 294 169 7965 258 27 9 chr20 27897873 27900399 -44253483 - L1MD1 LINE L1 -864 5282 2713 273 215 63 0 chr20 27900416 27900495 -44253387 - L1 LINE L1 -2874 3272 3189 222 37 0 0 chr20 27900601 27900628 -44253254 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2084 100 0 0 chr20 27902829 27903099 -44250783 - AluSg SINE Alu -3 307 38 2015 141 12 3 chr20 27904246 27904579 -44249303 + L1MA3 LINE L1 5970 6305 0 841 272 77 17 chr20 27904967 27905265 -44248617 - LTR16C LTR ERVL -30 461 146 490 284 25 0 chr20 27905914 27906076 -44247806 + MER5A DNA MER1_type 18 183 -6 25 0 0 0 chr20 27906258 27906283 -44247599 + AT_rich Low_complexity Low_complexity 1 25 0 439 270 37 2 chr20 27906831 27907074 -44246808 - LTR16A LTR ERVL 0 450 158 1402 230 36 45 chr20 27907536 27907983 -44245899 + L1ME2 LINE L1 5712 6154 -10 274 287 97 10 chr20 27908017 27908212 -44245670 + L1MC4 LINE L1 7827 8038 -4 2236 196 25 12 chr20 27909118 27909597 -44244285 - L1P LINE L1 -1214 4932 4448 3308 143 14 18 chr20 27909597 27910167 -44243715 + L1PA16 LINE L1 5595 6165 -1 386 278 90 0 chr20 27910357 27910490 -44243392 - MIR SINE MIR -13 249 105 207 268 49 0 chr20 27910567 27910649 -44243233 + MIR SINE MIR 107 192 -70 281 253 13 12 chr20 27912346 27912438 -44241444 + MIR SINE MIR 22 105 -103 805 275 92 35 chr20 27912926 27913436 -44240446 + MLT2E LTR ERVL 1 605 -23 511 183 21 0 chr20 27914969 27915062 -44238820 - MER3 DNA MER1_type -100 109 15 1172 28 7 0 chr20 27916589 27916733 -44237149 + (TTTC)n Simple_repeat Simple_repeat 2 146 0 2399 39 0 11 chr20 27916735 27917017 -44236865 - AluY SINE Alu -32 279 1 22 0 0 0 chr20 27917076 27917098 -44236784 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr20 27917219 27917248 -44236634 + AT_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr20 27917704 27917747 -44236135 + AT_rich Low_complexity Low_complexity 1 43 0 198 254 141 0 chr20 27917752 27917823 -44236059 - MIR3 SINE MIR -23 185 105 1818 162 27 0 chr20 27917958 27918254 -44235628 + AluJo SINE Alu 1 304 -8 27 29 0 0 chr20 27918330 27918364 -44235518 + AT_rich Low_complexity Low_complexity 1 34 0 192 264 56 0 chr20 27919704 27919776 -44234106 - L2 LINE L2 0 3313 3238 567 205 96 6 chr20 27920041 27920197 -44233685 - MER5B DNA MER1_type -6 172 3 1346 211 48 56 chr20 27920830 27921212 -44232670 + L1M4 LINE L1 5414 5794 -370 2471 46 0 0 chr20 27922036 27922338 -44231544 + AluY SINE Alu 1 302 0 252 143 0 0 chr20 27922573 27922615 -44231267 + (TG)n Simple_repeat Simple_repeat 2 43 0 600 144 162 9 chr20 27922628 27922739 -44231143 - FLAM_C SINE Alu -14 129 2 1024 114 0 10 chr20 27924213 27924418 -44229464 + (TC)n Simple_repeat Simple_repeat 1 202 0 442 291 71 71 chr20 27925043 27925425 -44228457 - L1M4 LINE L1 -2988 3158 2777 1639 162 92 0 chr20 27925521 27925879 -44228003 - Charlie5 DNA MER1_type 0 2624 2234 580 110 92 9 chr20 27925880 27925989 -44227893 - Charlie5 DNA MER1_type -2488 124 7 1769 210 3 0 chr20 27927094 27927432 -44226450 + L1PB4 LINE L1 5818 6156 0 208 147 0 0 chr20 27927442 27927476 -44226406 + (A)n Simple_repeat Simple_repeat 1 34 0 1973 154 3 3 chr20 27927486 27927798 -44226084 - AluSx SINE Alu 0 312 1 890 189 98 7 chr20 27928691 27928963 -44224919 + MER33 DNA MER1_type 1 262 -62 2165 121 0 0 chr20 27929117 27929406 -44224476 - AluSx SINE Alu -23 289 1 724 272 123 33 chr20 27929595 27929987 -44223895 - L2 LINE L2 -144 3169 2814 2082 97 7 4 chr20 27929987 27930288 -44223594 + AluSc SINE Alu 1 302 0 724 272 123 33 chr20 27930288 27930525 -44223357 - L2 LINE L2 -499 2814 2423 293 371 52 31 chr20 27930883 27931365 -44222517 - L2 LINE L2 -442 2872 2381 421 306 127 4 chr20 27931392 27931621 -44222261 - LTR16C LTR ERVL 0 491 235 2214 106 3 0 chr20 27932150 27932461 -44221421 - AluSq SINE Alu 0 312 1 2319 111 0 13 chr20 27932486 27932802 -44221080 + AluSq SINE Alu 1 312 -1 1470 141 137 22 chr20 27932868 27933138 -44220744 + AluJo SINE Alu 1 301 -1 1970 123 0 0 chr20 27933198 27933467 -44220415 - AluSx SINE Alu -43 269 1 205 345 52 10 chr20 27933752 27933879 -44220003 + MIR SINE MIR 32 137 -71 293 249 182 42 chr20 27935349 27935514 -44218368 + MIR SINE MIR 28 215 -47 26 0 0 0 chr20 27936154 27936180 -44217702 + AT_rich Low_complexity Low_complexity 1 26 0 1904 177 0 13 chr20 27936540 27936856 -44217026 + AluJb SINE Alu 1 312 0 1577 185 31 3 chr20 27937433 27937725 -44216157 + AluJo SINE Alu 1 300 -12 333 159 0 16 chr20 27937725 27937788 -44216094 + GA-rich Low_complexity Low_complexity 1 62 0 490 126 11 11 chr20 27937788 27937883 -44215999 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 2082 120 14 0 chr20 27938508 27938784 -44215098 + AluSx SINE Alu 1 280 -32 435 38 0 0 chr20 27938784 27938837 -44215045 + (GAAAA)n Simple_repeat Simple_repeat 3 55 0 195 295 29 48 chr20 27938970 27939075 -44214807 + MIR SINE MIR 62 164 -98 2334 91 0 22 chr20 27939383 27939701 -44214181 - AluY SINE Alu 0 311 1 524 260 0 26 chr20 27941263 27941417 -44212465 - MIR SINE MIR -5 257 108 21 0 0 0 chr20 27942842 27942863 -44211019 + AT_rich Low_complexity Low_complexity 1 21 0 303 182 23 11 chr20 27942888 27942976 -44210906 + GA-rich Low_complexity Low_complexity 2 90 0 337 279 90 0 chr20 27943277 27943388 -44210494 + MER103 DNA DNA 45 165 -1 261 203 31 36 chr20 27943653 27943739 -44210143 + MIR SINE MIR 33 116 -92 1236 253 172 33 chr20 27943781 27944299 -44209583 - MLT1E LTR MaLR -3 590 1 538 271 144 6 chr20 27944640 27944821 -44209061 - MIR SINE MIR -41 221 16 260 364 29 0 chr20 27946307 27946447 -44207435 + MIR SINE MIR 46 189 -73 302 197 15 15 chr20 27947070 27947136 -44206746 + MIR SINE MIR 77 142 -66 519 237 79 20 chr20 27947624 27947776 -44206106 - MIR SINE MIR -15 247 87 387 343 129 11 chr20 27947831 27948476 -44205406 + L2 LINE L2 2175 2895 -419 189 296 86 0 chr20 27948539 27948620 -44205262 - MIR SINE MIR -71 191 104 427 350 13 30 chr20 27949219 27949453 -44204429 - MIR SINE MIR -6 256 27 1472 174 87 10 chr20 27949468 27949756 -44204126 - AluJo SINE Alu -2 310 1 1440 47 3 3 chr20 27949881 27950177 -44203705 + (TTC)n Simple_repeat Simple_repeat 1 296 0 2863 210 108 31 chr20 27950459 27951615 -44202267 + L1ME1 LINE L1 4934 6163 -3 1219 259 100 24 chr20 27952450 27952948 -44200934 + L1MC4 LINE L1 7366 7901 -141 6211 118 4 0 chr20 27953428 27954410 -44199472 - L1PA15 LINE L1 -6 6159 5174 393 248 128 17 chr20 27954643 27954760 -44199122 - MLT1J2 LTR MaLR -34 416 287 597 273 94 49 chr20 27954883 27954932 -44198950 + MLT1G1 LTR MaLR 48 93 -502 1764 178 0 3 chr20 27954932 27955243 -44198639 + AluJb SINE Alu 1 310 0 597 273 94 49 chr20 27955243 27955625 -44198257 + MLT1G1 LTR MaLR 93 595 0 315 312 214 9 chr20 27955757 27955972 -44197910 - LTR33 LTR ERVL 0 521 263 417 156 0 0 chr20 27956207 27956284 -44197598 + (CAT)n Simple_repeat Simple_repeat 3 79 0 2212 120 0 7 chr20 27956696 27956995 -44196887 + AluSq SINE Alu 1 297 -16 199 366 73 26 chr20 27957014 27957205 -44196677 - L2 LINE L2 -405 2909 2710 250 325 0 0 chr20 27957462 27957542 -44196340 - L2 LINE L2 -13 3300 3221 201 260 13 39 chr20 27957608 27957685 -44196197 + L2 LINE L2 2936 3010 -262 240 317 50 68 chr20 27958131 27958352 -44195530 + MIR SINE MIR 23 239 -23 600 228 111 11 chr20 27958635 27958824 -44195058 - L2 LINE L2 0 3313 3106 27 0 0 0 chr20 27959083 27959110 -44194772 + AT_rich Low_complexity Low_complexity 1 27 0 1936 130 103 30 chr20 27959412 27959751 -44194131 - THE1B LTR MaLR 0 364 1 11814 88 5 45 chr20 27959751 27961397 -44192485 - THE1B-int LTR MaLR 0 1580 1 1921 145 111 15 chr20 27961397 27961729 -44192153 - THE1B LTR MaLR 0 364 1 355 272 73 22 chr20 27962074 27962210 -44191672 + MIR SINE MIR 118 260 -2 228 86 0 0 chr20 27962641 27962676 -44191206 + (CA)n Simple_repeat Simple_repeat 2 36 0 26 50 0 0 chr20 27962742 27962782 -44191100 + AT_rich Low_complexity Low_complexity 1 40 0 379 294 50 6 chr20 27962831 27963011 -44190871 - MIR SINE MIR 0 262 75 1191 183 0 0 chr20 27963170 27963372 -44190510 + AluJb SINE Alu 87 288 -24 398 228 25 0 chr20 27963717 27963796 -44190086 - AluJo SINE Alu -1 301 221 521 171 63 18 chr20 27963796 27963907 -44189975 - AluJo SINE Alu -124 188 73 1120 230 68 64 chr20 27964769 27964964 -44188918 - L1MC5 LINE L1 -66 7895 7702 2027 108 0 0 chr20 27964964 27965224 -44188658 + AluSc SINE Alu 38 297 -12 1120 230 68 64 chr20 27965224 27965619 -44188263 - L1MC5 LINE L1 -259 7702 7303 264 30 0 0 chr20 27965994 27966027 -44187855 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 891 210 0 0 chr20 27966035 27966197 -44187685 + FRAM SINE Alu 1 161 -15 285 29 0 0 chr20 27968461 27968495 -44185387 + (TG)n Simple_repeat Simple_repeat 1 34 0 183 162 0 0 chr20 27971678 27971715 -44182167 + (CA)n Simple_repeat Simple_repeat 2 38 0 784 0 0 20 chr20 27972890 27972988 -44180894 + (GAAA)n Simple_repeat Simple_repeat 3 98 0 200 114 0 29 chr20 27977789 27977824 -44176058 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 30 27 0 0 chr20 27981752 27981789 -44172093 + AT_rich Low_complexity Low_complexity 1 37 0 349 20 20 20 chr20 27982532 27982583 -44171299 + (TG)n Simple_repeat Simple_repeat 1 51 0 202 215 0 62 chr20 27984412 27984477 -44169405 + MIR SINE MIR 79 139 -123 27 87 0 0 chr20 27989487 27989556 -44164326 + GC_rich Low_complexity Low_complexity 1 69 0 22 35 0 0 chr20 27989757 27989786 -44164096 + AT_rich Low_complexity Low_complexity 1 29 0 188 139 56 0 chr20 27992099 27992135 -44161747 + L2 LINE L2 1971 2008 -1306 180 77 0 0 chr20 27993054 27993080 -44160802 + (TGG)n Simple_repeat Simple_repeat 1 26 0 251 266 0 0 chr20 27995384 27995448 -44158434 + CT-rich Low_complexity Low_complexity 6 69 0 536 69 0 11 chr20 27995649 27995736 -44158146 + (GGA)n Simple_repeat Simple_repeat 1 86 0 195 42 0 0 chr20 27997544 27997568 -44156314 + (CA)n Simple_repeat Simple_repeat 2 25 0 2131 112 3 0 chr20 27999172 27999476 -44154406 + AluSq SINE Alu 1 305 -8 259 143 0 0 chr20 28001113 28001155 -44152727 - L2 LINE L2 -4 3309 3268 447 220 213 35 chr20 28001820 28001961 -44151921 - MER5A DNA MER1_type -8 181 16 274 242 0 16 chr20 28004185 28004247 -44149635 + (TG)n Simple_repeat Simple_repeat 1 61 0 243 170 0 0 chr20 28005610 28005657 -44148225 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 624 267 121 0 chr20 28005753 28005985 -44147897 - MER112 DNA MER1_type 0 260 1 432 277 15 22 chr20 28006029 28006166 -44147716 + MIR SINE MIR 117 252 -10 422 250 9 18 chr20 28007437 28007549 -44146333 - LTR16A1 LTR ERVL 0 457 347 854 296 73 14 chr20 28008523 28008881 -44145001 + LTR16A LTR ERVL 64 442 -8 1699 257 44 2 chr20 28009105 28009513 -44144369 - LTR16C LTR ERVL 0 491 67 1969 80 0 4 chr20 28009812 28010074 -44143808 + AluY SINE Alu 1 261 -50 1737 153 7 27 chr20 28010295 28010451 -44143431 - AluSx SINE Alu -17 295 137 369 0 0 0 chr20 28010451 28010492 -44143390 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2056 112 0 20 chr20 28010493 28010788 -44143094 - AluSp SINE Alu -24 289 1 1737 153 7 27 chr20 28010788 28010930 -44142952 - AluSx SINE Alu -174 138 1 34 0 0 0 chr20 28010935 28010969 -44142913 + AT_rich Low_complexity Low_complexity 1 34 0 527 316 53 27 chr20 28012777 28013002 -44140880 + MIR SINE MIR 6 236 -26 243 0 0 0 chr20 28013451 28013478 -44140404 + (T)n Simple_repeat Simple_repeat 1 27 0 274 361 27 10 chr20 28013542 28013668 -44140214 + MIR SINE MIR 20 145 -84 239 206 7 184 chr20 28014018 28014159 -44139723 + MER5B DNA MER1_type 38 153 -25 * 451 202 9 73 chr20 28014081 28014190 -44139692 - MER5A DNA MER1_type -83 106 5 1912 133 122 20 chr20 28015622 28015976 -44137906 + MLT1B LTR MaLR 1 390 0 222 307 131 68 chr20 28016278 28016630 -44137252 - L2 LINE L2 -341 2973 2600 1438 207 0 16 chr20 28019753 28020062 -44133820 - AluJo SINE Alu -8 304 1 692 296 174 9 chr20 28020153 28020572 -44133310 + L1MC4a LINE L1 5416 5903 -1905 25 51 0 0 chr20 28020740 28020779 -44133103 + AT_rich Low_complexity Low_complexity 1 39 0 1829 168 0 0 chr20 28020784 28021088 -44132794 - AluSx SINE Alu -8 304 1 2047 207 106 40 chr20 28021404 28021949 -44131933 - MLT1E LTR MaLR -1 592 12 346 317 69 14 chr20 28022519 28022664 -44131218 + L2 LINE L2 3159 3311 -2 244 326 20 10 chr20 28024159 28024257 -44129625 + MIR SINE MIR 51 149 -113 560 308 99 56 chr20 28024614 28025027 -44128855 + L2 LINE L2 2344 2774 -540 324 282 48 0 chr20 28025270 28025373 -44128509 - MLT1L LTR MaLR -2 613 506 235 293 33 93 chr20 28025413 28025628 -44128254 - MLT1L LTR MaLR -207 408 207 231 289 13 26 chr20 28025688 28025764 -44128118 - MLT1L LTR MaLR -536 79 5 1025 251 21 29 chr20 28025894 28026173 -44127709 + L1MC4a LINE L1 7532 7808 0 330 252 63 18 chr20 28026437 28026548 -44127334 + HAL1b LINE L1 857 972 -376 852 211 23 0 chr20 28026554 28026729 -44127153 - FAM SINE Alu -1 48 1 1508 187 10 7 chr20 28026745 28027039 -44126843 - AluJb SINE Alu -12 300 6 357 271 42 99 chr20 28027047 28027471 -44126411 + HAL1b LINE L1 947 1346 -2 481 255 78 37 chr20 28028613 28028884 -44124998 - MER97c DNA MER1_type? -1 1089 808 1349 232 132 44 chr20 28028913 28029391 -44124491 - MER97b DNA MER1_type? -483 570 51 180 77 0 0 chr20 28030803 28030829 -44123053 + (TG)n Simple_repeat Simple_repeat 2 27 0 397 359 59 42 chr20 28030867 28031154 -44122728 + L3b LINE CR1 1292 1583 0 842 191 14 0 chr20 28032654 28032801 -44121081 + FAM SINE Alu 1 149 -36 186 43 0 0 chr20 28032808 28032831 -44121051 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 295 280 42 85 chr20 28032968 28033157 -44120725 - MLT1J LTR MaLR -330 181 1 183 129 0 0 chr20 28033805 28033836 -44120046 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 825 253 111 58 chr20 28033866 28034281 -44119601 - LTR16A LTR ERVL -1 449 13 559 258 139 53 chr20 28034403 28034740 -44119142 - MLT1J LTR MaLR -145 366 1 517 286 13 7 chr20 28034927 28035081 -44118801 - MER5B DNA MER1_type -12 166 12 1739 176 0 3 chr20 28035108 28035421 -44118461 + AluJo SINE Alu 1 312 0 309 68 0 0 chr20 28035465 28035509 -44118373 + (TG)n Simple_repeat Simple_repeat 2 45 0 440 244 23 68 chr20 28035509 28035685 -44118197 - MLT1K LTR MaLR -27 561 394 732 275 108 51 chr20 28036015 28036542 -44117340 - L1ME3 LINE L1 -211 5951 5455 1603 183 7 18 chr20 28036542 28036827 -44117055 - AluJo SINE Alu -30 282 1 732 275 108 51 chr20 28036827 28037283 -44116599 - L1ME3 LINE L1 -707 5455 4904 1126 218 94 101 chr20 28037349 28037785 -44116097 - MLT1E LTR MaLR 0 593 135 1491 192 21 14 chr20 28037794 28038081 -44115801 + AluJb SINE Alu 23 311 -1 24 0 0 0 chr20 28038187 28038211 -44115671 + AT_rich Low_complexity Low_complexity 1 24 0 282 268 21 21 chr20 28038289 28038386 -44115496 - MLT1E LTR MaLR -557 97 1 186 298 0 0 chr20 28038386 28038443 -44115439 + MIR SINE MIR 159 215 -47 1345 195 29 0 chr20 28038598 28038875 -44115007 + MLT2B1 LTR ERVL 1 285 -235 261 0 0 0 chr20 28041222 28041251 -44112631 + (CA)n Simple_repeat Simple_repeat 2 30 0 2109 133 0 0 chr20 28043257 28043551 -44110331 + AluSg SINE Alu 1 294 -16 253 283 9 38 chr20 28043584 28043690 -44110192 + MER103 DNA DNA 2 104 -62 411 210 38 57 chr20 28044854 28045011 -44108871 - LTR16A1 LTR ERVL 0 457 304 588 278 145 20 chr20 28045019 28045274 -44108608 - L2 LINE L2 -188 3125 2839 220 286 133 0 chr20 28045345 28045450 -44108432 + MIR3 SINE MIR 84 202 -6 1310 205 165 9 chr20 28045795 28045806 -44108076 - L1M4 LINE L1 -748 5398 5390 2209 193 44 10 chr20 28045806 28046304 -44107578 - L1MB7 LINE L1 -15 6405 5891 1310 205 165 9 chr20 28046304 28046716 -44107166 - L1M4 LINE L1 -756 5390 4909 29 0 0 0 chr20 28046730 28046759 -44107123 + AT_rich Low_complexity Low_complexity 1 29 0 620 200 70 19 chr20 28047817 28048032 -44105850 - L1MB7 LINE L1 -1676 4706 4481 * 1215 247 86 26 chr20 28048023 28048931 -44104951 - L1MB7 LINE L1 -3462 2920 1950 296 240 70 10 chr20 28048947 28049047 -44104835 - L1MB7 LINE L1 -4545 1839 1734 504 33 0 0 chr20 28099047 28099108 -44054774 - AluY SINE Alu -248 62 2 223 304 14 0 chr20 28099622 28099691 -44054191 + (TG)n Simple_repeat Simple_repeat 1 70 0 832 267 123 11 chr20 28100043 28100417 -44053465 - LTR16A1 LTR ERVL -34 423 8 624 228 6 6 chr20 28100776 28100947 -44052935 - L1M4 LINE L1 -1695 4451 4281 625 252 70 93 chr20 28101619 28102036 -44051846 - MLT1I LTR MaLR 0 409 3 353 222 22 22 chr20 28103377 28103467 -44050415 - MIR SINE MIR -67 141 52 22 0 0 0 chr20 28103522 28103544 -44050338 + AT_rich Low_complexity Low_complexity 1 22 0 2706 78 0 3 chr20 28103548 28103896 -44049986 - L1PA8 LINE L1 -12 6160 5814 720 182 0 8 chr20 28103987 28104119 -44049763 - L1PA16 LINE L1 -9 6157 6027 187 171 14 114 chr20 28104345 28104415 -44049467 + MIR SINE MIR 170 232 -30 652 261 34 0 chr20 28105335 28105542 -44048340 - Charlie5 DNA MER1_type -27 2585 2372 1951 101 64 13 chr20 28105687 28105985 -44047897 - AluSp SINE Alu 0 313 1 240 174 261 0 chr20 28106254 28106323 -44047559 + L1MB7 LINE L1 6089 6175 -9 546 188 0 0 chr20 28106324 28106489 -44047393 + GA-rich Low_complexity Low_complexity 2 166 0 309 99 39 72 chr20 28106492 28106718 -44047164 + HERV17 LTR ERV1 704 852 -7774 192 40 0 0 chr20 28107364 28107389 -44046493 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 234 0 0 0 chr20 28108344 28108370 -44045512 + (TA)n Simple_repeat Simple_repeat 2 27 0 1977 101 0 60 chr20 28108370 28108686 -44045196 - AluSc SINE Alu -12 297 1 201 225 0 0 chr20 28109698 28109738 -44044144 + GA-rich Low_complexity Low_complexity 3 42 0 540 224 38 93 chr20 28111297 28111480 -44042402 - MIR SINE MIR -28 234 62 655 275 100 53 chr20 28111670 28112182 -44041700 + MLT1H1 LTR MaLR 14 549 -6 611 228 0 0 chr20 28113814 28113928 -44039954 + MER58B DNA MER1_type 227 340 -1 2420 174 26 2 chr20 28114021 28114436 -44039446 - MSTB LTR MaLR -1 425 1 276 223 0 0 chr20 28114468 28114571 -44039311 + (CA)n Simple_repeat Simple_repeat 2 104 0 527 275 161 0 chr20 28114830 28115066 -44038816 + LTR16C LTR ERVL 180 453 -38 185 264 38 19 chr20 28118115 28118168 -44035714 - MIR3 SINE MIR -43 165 112 504 307 116 58 chr20 28118937 28119439 -44034443 - L2 LINE L2 -467 2847 2317 219 125 0 0 chr20 28119793 28119833 -44034049 + (TG)n Simple_repeat Simple_repeat 1 40 0 351 161 0 0 chr20 28120573 28120629 -44033253 - MLT1H LTR MaLR -4 545 490 23 54 0 0 chr20 28121622 28121659 -44032223 + AT_rich Low_complexity Low_complexity 1 37 0 965 165 18 18 chr20 28121970 28122140 -44031742 - MLT1A1 LTR MaLR 0 365 196 651 144 0 0 chr20 28122136 28122226 -44031656 - 5S rRNA rRNA -31 90 1 * 642 224 158 46 chr20 28122177 28122418 -44031464 - MLT1A1 LTR MaLR -97 268 1 * 376 299 138 19 chr20 28123051 28123362 -44030520 - L1MC/D LINE L1 -2194 5614 5267 228 283 62 26 chr20 28123938 28124051 -44029831 - HAL1b LINE L1 -437 911 795 1361 238 101 52 chr20 28124099 28124661 -44029221 - MLT1G LTR MaLR 0 590 1 489 287 82 94 chr20 28124834 28125175 -44028707 + L2 LINE L2 2932 3268 -4 650 260 96 29 chr20 28125217 28125602 -44028280 - HAL1b LINE L1 -472 876 466 413 249 63 101 chr20 28125619 28125687 -44028195 + MIR SINE MIR 15 84 -178 1288 212 36 43 chr20 28125687 28125989 -44027893 - AluJb SINE Alu -2 300 1 413 249 63 101 chr20 28125989 28126109 -44027773 + MIR SINE MIR 84 196 -66 447 223 46 69 chr20 28126432 28126562 -44027320 - MER63 DNA MER1_type -308 754 2 12113 135 53 72 chr20 28126669 28126968 -44026914 + Tigger1 DNA MER2_type 2 305 -2113 1778 152 10 0 chr20 28126968 28127257 -44026625 - AluSx SINE Alu -20 292 1 12113 135 53 72 chr20 28127257 28129421 -44024461 + Tigger1 DNA MER2_type 305 2418 0 293 119 0 0 chr20 28129435 28129477 -44024405 - 5S rRNA rRNA -79 42 1 465 269 87 10 chr20 28129527 28129735 -44024147 - HAL1b LINE L1 -897 451 228 2154 98 0 3 chr20 28129881 28130177 -44023705 - AluY SINE Alu -16 295 1 2070 278 88 27 chr20 28130684 28131617 -44022265 + Zaphod DNA AcHobo 1 990 -3041 761 216 37 26 chr20 28131672 28131862 -44022020 - MER20 DNA MER1_type -26 193 2 762 288 117 8 chr20 28131873 28132224 -44021658 + Zaphod DNA AcHobo 3600 3988 -43 308 253 91 7 chr20 28132967 28133121 -44020761 + L1ME4a LINE L1 5747 5913 -208 1157 240 122 6 chr20 28133155 28133467 -44020415 + MER7A DNA MER2_type 1 346 0 311 341 8 24 chr20 28133472 28133598 -44020284 + L1ME4a LINE L1 5977 6100 -21 1297 253 118 28 chr20 28134618 28135164 -44018718 - L1ME2 LINE L1 -16 6148 5549 339 339 30 36 chr20 28135168 28135336 -44018546 - MIR3 SINE MIR -6 202 36 249 342 45 0 chr20 28135741 28135852 -44018030 - L2 LINE L2 -1305 2009 1894 189 257 0 0 chr20 28135855 28135890 -44017992 + L2 LINE L2 3237 3271 -42 519 279 43 0 chr20 28135993 28136133 -44017749 - L2 LINE L2 -1536 1778 1633 289 277 109 34 chr20 28136973 28137092 -44016790 + MIR SINE MIR 64 191 -71 2720 136 21 2 chr20 28137374 28137794 -44016088 + MSTA LTR MaLR 1 428 0 479 314 87 52 chr20 28138606 28138974 -44014908 - L2 LINE L2 0 3272 2151 232 269 52 90 chr20 28139311 28139445 -44014437 - L2 LINE L2 -700 2614 2486 495 332 72 11 chr20 28141317 28141594 -44012288 + L2 LINE L2 1993 2286 -1028 460 326 176 11 chr20 28141632 28142102 -44011780 + L2 LINE L2 2503 3049 -223 607 236 130 17 chr20 28142791 28142997 -44010885 + L1ME1 LINE L1 5943 6170 0 889 289 57 21 chr20 28143245 28143715 -44010167 - LTR16C LTR ERVL -2 489 3 384 309 86 45 chr20 28143945 28144165 -44009717 - MIR SINE MIR -13 249 21 406 191 152 0 chr20 28144871 28144976 -44008906 + LTR16C LTR ERVL 371 491 0 234 202 42 34 chr20 28146949 28147068 -44006814 + GA-rich Low_complexity Low_complexity 1 120 0 187 263 0 0 chr20 28147571 28147628 -44006254 - MIR SINE MIR -109 153 97 367 237 68 8 chr20 28148518 28148636 -44005246 + MIR SINE MIR 109 233 -29 445 293 0 14 chr20 28149719 28149859 -44004023 + MER117 DNA MER1_type 58 195 -2 348 344 78 10 chr20 28151145 28151337 -44002545 - MIR SINE MIR -11 251 47 229 239 0 0 chr20 28151520 28151566 -44002316 + L2 LINE L2 3227 3272 0 1528 234 165 17 chr20 28151589 28151760 -44002122 - MLT1D LTR MaLR -7 498 354 1437 122 8 239 chr20 28151760 28152284 -44001598 - MER57A LTR ERV1 0 403 1 1528 234 165 17 chr20 28152284 28152530 -44001352 - MLT1D LTR MaLR -151 354 19 227 379 11 0 chr20 28152770 28152865 -44001017 + MIR SINE MIR 123 218 -44 253 353 29 0 chr20 28155194 28155296 -43998586 + L2 LINE L2 3204 3308 -5 232 330 162 11 chr20 28155460 28155651 -43998231 + MIR SINE MIR 33 252 -10 232 271 25 57 chr20 28155682 28155804 -43998078 - LTR67 LTR ERVL -14 543 426 1295 249 148 15 chr20 28157602 28158080 -43995802 + L1MC4 LINE L1 7362 7903 -139 183 278 0 28 chr20 28158453 28158525 -43995357 - MIR3 SINE MIR -53 155 86 21 0 0 0 chr20 28159168 28159189 -43994693 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr20 28161048 28161082 -43992800 + (TA)n Simple_repeat Simple_repeat 2 35 0 4159 56 9 34 chr20 28161189 28161746 -43992136 - L1PA8 LINE L1 -8 6164 5622 712 292 75 59 chr20 28161890 28162383 -43991499 - MLT1J LTR MaLR 0 511 11 1877 253 32 26 chr20 28162459 28162958 -43990924 + LTR45 LTR ERV1 22 523 -2 500 287 72 29 chr20 28162958 28163159 -43990723 - MLT1J LTR MaLR -192 319 110 356 247 47 20 chr20 28163552 28163702 -43990180 - MER103 DNA DNA -9 157 4 423 263 28 38 chr20 28164466 28164679 -43989203 + L1ME4a LINE L1 5846 6056 -65 2082 111 0 13 chr20 28164838 28165145 -43988737 - AluSx SINE Alu -9 303 1 422 222 0 0 chr20 28167008 28167089 -43986793 - L1MC4 LINE L1 -20 8022 7942 1026 244 109 0 chr20 28167115 28167426 -43986456 - L1MC4 LINE L1 -183 7859 7515 27 0 0 0 chr20 28169158 28169185 -43984697 + AT_rich Low_complexity Low_complexity 1 27 0 1722 204 24 31 chr20 28169185 28169601 -43984281 - L1PB4 LINE L1 0 6156 5744 323 271 62 8 chr20 28169603 28169732 -43984150 + LTR16C LTR ERVL 355 490 -1 2063 121 3 3 chr20 28170388 28170685 -43983197 - AluJb SINE Alu -15 297 1 339 218 35 11 chr20 28171775 28171862 -43982020 + MIR SINE MIR 98 186 -76 192 292 123 0 chr20 28172544 28172609 -43981273 + L2 LINE L2 3200 3272 0 473 232 177 77 chr20 28173146 28173471 -43980411 + MLT1H LTR MaLR 51 579 -16 5480 196 33 85 chr20 28174289 28174848 -43979034 + L1MC1 LINE L1 3915 4501 -1832 6939 65 6 28 chr20 28174848 28176518 -43977364 - L1PA7 LINE L1 -16 6138 4488 5480 196 33 85 chr20 28176518 28178499 -43975383 + L1MC1 LINE L1 4501 6317 -16 798 204 15 6 chr20 28178841 28179486 -43974396 + CT-rich Low_complexity Low_complexity 1 650 0 300 351 43 69 chr20 28179486 28179791 -43974091 - L2 LINE L2 -9 3263 2967 1106 237 95 58 chr20 28180069 28180479 -43973403 - LTR16A LTR ERVL -10 440 16 804 266 178 23 chr20 28181503 28181857 -43972025 + LTR16C LTR ERVL 83 491 0 417 256 116 18 chr20 28182621 28182785 -43971097 + L3b LINE CR1 1161 1340 -243 2034 107 14 0 chr20 28182849 28183139 -43970743 - AluSg1 SINE Alu -15 294 1 295 117 333 0 chr20 28183363 28183423 -43970459 - MADE1 DNA Mariner 0 80 1 197 265 60 48 chr20 28187577 28187660 -43966222 + MIR SINE MIR 16 99 -109 462 165 10 31 chr20 28187871 28187968 -43965914 - FLAM_C SINE Alu -2 141 47 1551 216 50 41 chr20 28188189 28188652 -43965230 + MLT1C LTR MaLR 1 467 0 296 308 125 6 chr20 28189069 28189243 -43964639 + MIR SINE MIR 15 205 -36 2729 240 39 31 chr20 28191158 28191933 -43961949 + L1MCb LINE L1 -135 645 -5262 1269 188 43 14 chr20 28191917 28192355 -43961527 + L1MCb LINE L1 1443 2253 -4173 * 5136 110 37 0 chr20 28192361 28193099 -43960783 + L1PA14 LINE L1 5397 6161 0 1261 254 89 41 chr20 28193092 28194142 -43959740 + L1MEc LINE L1 1660 2693 -3522 * 6817 175 41 11 chr20 28194263 28196082 -43957800 + L1MA9 LINE L1 3975 5842 -470 * 36821 101 15 20 chr20 28196055 28202027 -43951855 + L1MD2 LINE L1 433 6358 -1 641 297 50 83 chr20 28202487 28202992 -43950890 - L2 LINE L2 0 3313 2826 725 316 163 38 chr20 28203610 28204347 -43949535 + L2 LINE L2 2448 3272 0 218 189 0 0 chr20 28204391 28204428 -43949454 + CT-rich Low_complexity Low_complexity 2 38 0 963 297 105 13 chr20 28208677 28209067 -43944815 + LTR16A1 LTR ERVL 26 451 -6 362 246 55 9 chr20 28210326 28210436 -43943446 + MLT1K LTR MaLR 349 463 -125 3918 214 38 37 chr20 28210905 28211338 -43942544 + L1MCb LINE L1 1 432 -6132 192 40 0 0 chr20 28211338 28211363 -43942519 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3918 214 38 37 chr20 28211363 28212744 -43941138 + L1MCb LINE L1 432 1930 -4634 711 183 4 55 chr20 28212737 28212964 -43940918 - L1ME2 LINE L1 -307 5857 5653 * 26 34 0 51 chr20 28213038 28213097 -43940785 + AT_rich Low_complexity Low_complexity 1 56 0 1479 202 59 24 chr20 28213139 28213339 -43940543 + L1MC2 LINE L1 5960 6178 -166 2265 92 0 20 chr20 28213339 28213642 -43940240 + AluY SINE Alu 2 298 -13 1479 202 59 24 chr20 28213642 28213778 -43940104 + L1MC2 LINE L1 6178 6308 -36 27986 42 5 2 chr20 28213827 28218056 -43935826 - L1PA4 LINE L1 0 6549 1933 244 25 75 0 chr20 28218370 28218410 -43935472 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6740 80 10 10 chr20 28218410 28219391 -43934491 - L1PA8 LINE L1 -22 6150 5172 2734 182 16 0 chr20 28220033 28220534 -43933348 - L1MC3 LINE L1 -15 7770 7262 454 314 98 18 chr20 28220617 28220887 -43932995 - ERVL LTR ERVL -185 5300 5047 843 304 56 8 chr20 28220923 28221278 -43932604 - ERVL LTR ERVL -733 4921 4550 434 88 15 0 chr20 28221307 28221375 -43932507 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 404 254 132 79 chr20 28221902 28222182 -43931700 - MLT1H LTR MaLR -252 297 3 10129 171 8 39 chr20 28222549 28224180 -43929702 + L1M2 LINE L1 3403 4969 -1331 2150 114 0 0 chr20 28224180 28224478 -43929404 + AluSc SINE Alu 6 303 0 10129 171 8 39 chr20 28224478 28225061 -43928821 + L1M2 LINE L1 4969 5569 -731 407 250 103 60 chr20 28225687 28225871 -43928011 - L1ME2 LINE L1 -57 6107 5916 691 160 0 3 chr20 28226260 28226377 -43927505 + L1PA16 LINE L1 5996 6110 -44 510 205 53 116 chr20 28226764 28226845 -43927037 - L1MC5 LINE L1 -205 7756 7671 2457 117 24 46 chr20 28226845 28227142 -43926740 + L1PA16 LINE L1 5761 6048 -118 2743 35 0 0 chr20 28227142 28227453 -43926429 + AluY SINE Alu 1 311 0 2457 117 24 46 chr20 28227453 28227565 -43926317 + L1PA16 LINE L1 6048 6161 -5 510 205 53 116 chr20 28227565 28227786 -43926096 - L1MC5 LINE L1 -290 7671 7473 2428 50 3 0 chr20 28228178 28228475 -43925407 - AluY SINE Alu -12 299 2 211 210 222 0 chr20 28229423 28229504 -43924378 - MIR SINE MIR -6 256 158 2149 194 49 9 chr20 28229569 28230018 -43923864 + MLT1C LTR MaLR 1 467 0 206 294 104 29 chr20 28230039 28230231 -43923651 - MIR SINE MIR -19 243 32 710 299 134 36 chr20 28231286 28231764 -43922118 - MLT1H LTR MaLR 0 549 25 820 203 158 20 chr20 28232132 28232334 -43921548 + MER46A DNA MER2_type 1 230 -6 1448 178 0 4 chr20 28235438 28235663 -43918219 + MER58A DNA MER1_type 1 224 0 303 358 0 0 chr20 28235946 28236055 -43917827 + MIR SINE MIR 104 212 -50 225 264 69 23 chr20 28236107 28236194 -43917688 - MIR3 SINE MIR -24 184 94 226 375 16 0 chr20 28236253 28236381 -43917501 - MIR SINE MIR -8 254 125 850 197 59 25 chr20 28236865 28237068 -43916814 + MER20 DNA MER1_type 10 219 0 496 304 55 37 chr20 28237257 28237530 -43916352 - LTR16C LTR ERVL -2 489 212 197 257 14 43 chr20 28238531 28238601 -43915281 - L2 LINE L2 -8 3305 3238 939 268 106 27 chr20 28238664 28239071 -43914811 + LTR33A LTR ERVL 57 495 -28 227 265 30 157 chr20 28239090 28239164 -43914718 + L2 LINE L2 2825 2907 -406 2215 84 45 0 chr20 28239164 28239451 -43914431 - AluY SINE Alu -11 300 1 227 265 30 157 chr20 28239451 28239772 -43914110 + L2 LINE L2 2907 3170 -143 588 256 31 31 chr20 28240329 28240520 -43913362 + LTR16C LTR ERVL 298 488 -3 453 266 82 0 chr20 28240849 28241020 -43912862 + MER5A DNA MER1_type 7 189 0 1881 227 75 50 chr20 28241465 28242002 -43911880 - MER77 LTR ERV1 -15 590 41 334 294 102 47 chr20 28242023 28242278 -43911604 + LTR16C LTR ERVL 223 491 0 391 292 44 9 chr20 28242536 28242649 -43911233 - LTR33A LTR ERVL -341 182 66 1668 84 34 0 chr20 28245029 28245266 -43908616 - L1PA10 LINE L1 -1 6167 5923 3375 89 0 33 chr20 28245285 28245316 -43908566 - MER41A LTR ERV1 -85 469 439 1859 94 25 97 chr20 28245316 28245635 -43908247 + AluSg SINE Alu 1 296 -14 3375 89 0 33 chr20 28245635 28246088 -43907794 - MER41A LTR ERV1 -115 439 1 1106 52 22 0 chr20 28246089 28246223 -43907659 - MER41A-int LTR ERV1 -11 5935 5799 1564 87 5 0 chr20 28246223 28246431 -43907451 - L1PA10 LINE L1 -195 5936 5728 27 49 0 0 chr20 28246905 28246946 -43906936 + AT_rich Low_complexity Low_complexity 1 41 0 754 218 19 66 chr20 28247809 28248020 -43905862 + MER3 DNA MER1_type 1 201 -8 830 307 95 0 chr20 28248045 28248351 -43905531 + L2 LINE L2 633 967 -2347 736 261 103 52 chr20 28248351 28248440 -43905442 - L1MEc LINE L1 -5609 787 704 712 204 8 0 chr20 28248440 28248572 -43905310 + FLAM_A SINE Alu 1 133 0 736 261 103 52 chr20 28248572 28248850 -43905032 - L1MEc LINE L1 -5692 704 401 339 218 178 20 chr20 28249018 28249119 -43904763 - L1MEc LINE L1 -6010 386 270 225 0 0 0 chr20 28249148 28249173 -43904709 + (GA)n Simple_repeat Simple_repeat 2 26 0 376 203 0 0 chr20 28249181 28249250 -43904632 - L1MEc LINE L1 -6294 102 34 3704 274 141 19 chr20 28249262 28249545 -43904337 + L2 LINE L2 996 1243 -2070 729 0 0 0 chr20 28249545 28249626 -43904256 + (TTCTC)n Simple_repeat Simple_repeat 1 81 0 3704 274 141 19 chr20 28249626 28251356 -43902526 + L2 LINE L2 1243 3305 -8 295 278 0 14 chr20 28252567 28252639 -43901243 + (TG)n Simple_repeat Simple_repeat 1 71 0 432 258 139 57 chr20 28253515 28253868 -43900014 + MLT1J1 LTR MaLR 15 396 -50 * 1356 255 81 9 chr20 28253848 28254279 -43899603 - MLT1C LTR MaLR -5 462 1 253 143 0 82 chr20 28254288 28254337 -43899545 + MLT1J2 LTR MaLR 403 447 -3 1547 183 42 25 chr20 28255278 28255562 -43898320 - AluJo SINE Alu -23 289 1 5392 170 49 15 chr20 28255562 28257390 -43896492 - L1MC1 LINE L1 -9 6324 4596 7475 208 30 25 chr20 28257395 28257933 -43895949 - L1 LINE L1 -2451 4337 3803 1560 199 19 13 chr20 28257933 28258240 -43895642 - AluJo SINE Alu -3 309 1 7475 208 30 25 chr20 28258240 28261199 -43892683 - L1 LINE L1 -2985 3803 844 1565 211 61 12 chr20 28261758 28262235 -43891647 - L1MCa LINE L1 -4630 1977 1290 2204 108 0 40 chr20 28262235 28262559 -43891323 - AluY SINE Alu 0 311 1 946 201 91 42 chr20 28262576 28262914 -43890968 - MSTC LTR MaLR -17 348 2 6322 186 18 41 chr20 28262914 28264218 -43889664 - L1MCa LINE L1 -5133 1293 20 217 304 139 17 chr20 28264507 28264622 -43889260 - MIR SINE MIR -10 252 124 1229 196 164 116 chr20 28264864 28265186 -43888696 - MLT1F1 LTR MaLR 0 567 262 195 42 0 0 chr20 28265186 28265210 -43888672 + (GA)n Simple_repeat Simple_repeat 1 24 0 1229 196 164 116 chr20 28265210 28265249 -43888633 - MLT1F1 LTR MaLR -305 262 226 8192 141 3 0 chr20 28265249 28267404 -43886478 - L1PA10 LINE L1 -13 6155 4058 1229 196 164 116 chr20 28267404 28267584 -43886298 - MLT1F1 LTR MaLR -341 226 1 2335 248 51 11 chr20 28267753 28268385 -43885497 + L1MC4 LINE L1 7260 7916 -126 230 191 0 0 chr20 28268406 28268448 -43885434 + L1MC4 LINE L1 8000 8041 -1 479 319 22 4 chr20 28269717 28269946 -43883936 - L1M4 LINE L1 -2686 3460 3228 215 182 11 68 chr20 28270570 28270658 -43883224 + A-rich Low_complexity Low_complexity 2 84 0 258 222 0 0 chr20 28271517 28271571 -43882311 + MER103 DNA DNA 58 111 -55 28 29 0 0 chr20 28272088 28272123 -43881759 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr20 28272535 28272560 -43881322 + AT_rich Low_complexity Low_complexity 1 25 0 307 212 106 78 chr20 28272602 28272781 -43881101 - L1ME3 LINE L1 -45 6117 5934 243 0 0 0 chr20 28272785 28272812 -43881070 + (A)n Simple_repeat Simple_repeat 1 27 0 2363 107 3 22 chr20 28272824 28273189 -43880693 - L1PA15 LINE L1 -13 6152 5795 584 264 165 24 chr20 28273195 28273528 -43880354 - L1ME3 LINE L1 -219 5943 5564 271 245 0 0 chr20 28273604 28273657 -43880225 + MER31B LTR ERV1 5 57 -409 1113 45 0 0 chr20 28273663 28273797 -43880085 - L1PA5 LINE L1 -6 6148 6015 2525 30 7 0 chr20 28273797 28274098 -43879784 + L1P LINE L1 4918 5220 -926 1846 226 92 7 chr20 28274100 28274556 -43879326 + MER67A LTR ERV1 49 543 0 467 235 80 8 chr20 28274556 28274724 -43879158 - L1ME3 LINE L1 -720 5444 5272 1747 137 21 3 chr20 28276045 28276330 -43877552 - L1PB3 LINE L1 0 6154 5865 2265 111 7 0 chr20 28276452 28276758 -43877124 + AluSg SINE Alu 1 308 -2 2210 115 0 3 chr20 28277130 28277425 -43876457 - AluSq SINE Alu -19 294 1 1121 182 79 87 chr20 28278064 28278432 -43875450 - MLT1A1 LTR MaLR 0 365 1 1953 147 0 0 chr20 28278668 28278999 -43874883 - AluSq SINE Alu 0 331 1 27 49 0 0 chr20 28279008 28279049 -43874833 + AT_rich Low_complexity Low_complexity 1 41 0 210 118 0 0 chr20 28279178 28279212 -43874670 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 231 114 0 0 chr20 28279330 28279365 -43874517 + (TG)n Simple_repeat Simple_repeat 2 36 0 790 276 54 44 chr20 28279501 28279907 -43873975 - MER20B DNA MER1_type -373 410 1 1056 269 85 45 chr20 28282933 28283405 -43870477 + LTR16C LTR ERVL 1 491 0 1554 134 24 38 chr20 28284257 28284548 -43869334 - L1MB3 LINE L1 0 6183 5897 1555 241 31 21 chr20 28284688 28285170 -43868712 + L1MC1 LINE L1 4159 4645 -1501 1642 251 63 2 chr20 28286584 28287111 -43866771 + L1MC1 LINE L1 4637 5195 -951 37229 63 7 0 chr20 28287112 28293228 -43860654 + L1PA5 LINE L1 2 6154 0 6105 158 27 3 chr20 28293229 28294348 -43859534 + L1MC1 LINE L1 5188 6333 0 1126 319 158 37 chr20 28294391 28294838 -43859044 + L2 LINE L2 1377 1768 -1545 1842 123 0 60 chr20 28294838 28295154 -43858728 + AluSx SINE Alu 1 297 -15 1126 319 158 37 chr20 28295154 28296157 -43857725 + L2 LINE L2 1768 3044 -269 333 0 0 0 chr20 28296254 28296291 -43857591 + (CA)n Simple_repeat Simple_repeat 1 37 0 343 311 11 0 chr20 28296303 28296393 -43857489 + L2 LINE L2 3223 3313 0 1825 162 33 0 chr20 28296527 28296860 -43857022 + L1MA7 LINE L1 5795 6138 -153 196 269 124 48 chr20 28298047 28298192 -43855690 - MIR SINE MIR -64 144 9 2280 232 16 33 chr20 28298663 28299240 -43854642 + MLT1F1 LTR MaLR 1 567 0 245 279 36 18 chr20 28299363 28299474 -43854408 + LTR33 LTR ERVL 405 517 -4 2164 82 0 33 chr20 28300127 28300432 -43853450 + AluY SINE Alu 1 295 -16 613 170 9 9 chr20 28302045 28302157 -43851725 - MER53 DNA DNA -77 112 1 509 312 25 10 chr20 28302160 28302359 -43851523 - LTR16A LTR ERVL -75 375 174 860 239 140 51 chr20 28302921 28303277 -43850605 - LTR16C LTR ERVL 0 491 104 230 358 62 0 chr20 28303440 28303616 -43850266 - L2 LINE L2 -339 2975 2789 307 300 11 94 chr20 28304486 28304666 -43849216 + MIR3 SINE MIR 3 167 -41 282 250 313 25 chr20 28304729 28304889 -43848993 + MIR SINE MIR 2 207 -55 345 279 50 14 chr20 28305022 28305162 -43848720 - LTR67 LTR ERVL -4 553 409 1629 140 64 0 chr20 28305591 28305856 -43848026 + AluSx SINE Alu 19 300 -12 347 314 73 73 chr20 28306543 28306791 -43847091 - MIR SINE MIR -3 259 12 189 107 0 0 chr20 28306807 28306835 -43847047 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 2233 67 0 0 chr20 28306983 28307305 -43846577 - AluY SINE Alu 0 311 11 1938 130 103 30 chr20 28307588 28307927 -43845955 - THE1B LTR MaLR 0 364 1 11837 88 5 45 chr20 28307927 28309573 -43844309 - THE1B-int LTR MaLR 0 1580 1 1905 148 111 15 chr20 28309573 28309905 -43843977 - THE1B LTR MaLR 0 364 1 433 289 126 32 chr20 28310196 28310386 -43843496 + MIR SINE MIR 53 260 -2 185 227 0 91 chr20 28310610 28310676 -43843206 + L2 LINE L2 3169 3228 -85 228 86 0 0 chr20 28310817 28310852 -43843030 + (CA)n Simple_repeat Simple_repeat 2 36 0 26 50 0 0 chr20 28310918 28310958 -43842924 + AT_rich Low_complexity Low_complexity 1 40 0 462 279 64 8 chr20 28311007 28311203 -43842679 - MIR SINE MIR 0 262 56 1120 192 0 0 chr20 28311346 28311560 -43842322 + AluJb SINE Alu 87 300 -12 401 228 25 0 chr20 28311893 28311972 -43841910 - AluJo SINE Alu -1 301 221 523 171 63 18 chr20 28311972 28312083 -43841799 - AluJo SINE Alu -124 188 73 210 352 117 34 chr20 28312515 28312813 -43841069 - L2 LINE L2 -1264 2050 1728 1146 227 69 66 chr20 28312945 28313140 -43840742 - L1MC5 LINE L1 -66 7895 7702 1908 108 0 0 chr20 28313140 28313399 -43840483 + AluSc SINE Alu 38 296 -13 1146 227 69 66 chr20 28313399 28313794 -43840088 - L1MC5 LINE L1 -259 7702 7303 839 207 6 6 chr20 28314184 28314363 -43839519 + AluJo SINE Alu 118 296 -16 267 31 0 0 chr20 28316623 28316655 -43837227 + (TG)n Simple_repeat Simple_repeat 1 32 0 197 280 129 11 chr20 28317647 28317740 -43836142 + MIR SINE MIR 28 131 -77 183 162 0 0 chr20 28319837 28319874 -43834008 + (CA)n Simple_repeat Simple_repeat 2 38 0 500 0 0 16 chr20 28321049 28321110 -43832772 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 200 114 0 29 chr20 28325913 28325948 -43827934 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 30 27 0 0 chr20 28329876 28329913 -43823969 + AT_rich Low_complexity Low_complexity 1 37 0 349 20 20 20 chr20 28330656 28330707 -43823175 + (TG)n Simple_repeat Simple_repeat 1 51 0 229 215 0 62 chr20 28332536 28332601 -43821281 + MIR SINE MIR 79 139 -123 25 31 0 0 chr20 28337646 28337678 -43816204 + GC_rich Low_complexity Low_complexity 1 32 0 225 170 0 21 chr20 28339860 28339907 -43813975 + L1ME2 LINE L1 6118 6163 -1 188 139 56 0 chr20 28340218 28340254 -43813628 + L2 LINE L2 1971 2008 -1306 21 0 0 0 chr20 28340591 28340612 -43813270 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr20 28341171 28341197 -43812685 + (TGG)n Simple_repeat Simple_repeat 1 26 0 251 266 0 0 chr20 28343499 28343563 -43810319 + CT-rich Low_complexity Low_complexity 6 69 0 569 58 0 11 chr20 28343764 28343851 -43810031 + (GGA)n Simple_repeat Simple_repeat 1 86 0 195 42 0 0 chr20 28345659 28345683 -43808199 + (CA)n Simple_repeat Simple_repeat 2 25 0 2258 112 3 0 chr20 28347288 28347592 -43806290 + AluSq SINE Alu 1 305 -8 240 143 0 0 chr20 28349229 28349271 -43804611 - L2 LINE L2 -4 3309 3268 389 220 213 35 chr20 28349936 28350077 -43803805 - MER5A DNA MER1_type -8 181 16 22 35 0 0 chr20 28350497 28350526 -43803356 + AT_rich Low_complexity Low_complexity 1 29 0 274 242 0 16 chr20 28352303 28352365 -43801517 + (TG)n Simple_repeat Simple_repeat 1 61 0 243 170 0 0 chr20 28353728 28353775 -43800107 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 636 267 121 0 chr20 28353871 28354103 -43799779 - MER112 DNA MER1_type 0 260 1 364 277 15 22 chr20 28354147 28354284 -43799598 + MIR SINE MIR 117 252 -10 413 250 9 18 chr20 28355557 28355669 -43798213 - LTR16A1 LTR ERVL 0 457 347 823 296 73 14 chr20 28356643 28357001 -43796881 + LTR16A LTR ERVL 64 442 -8 1665 257 44 2 chr20 28357225 28357633 -43796249 - LTR16C LTR ERVL 0 491 67 2074 84 0 4 chr20 28357932 28358194 -43795688 + AluY SINE Alu 1 261 -50 1860 153 7 27 chr20 28358415 28358571 -43795311 - AluSx SINE Alu -17 295 137 369 0 0 0 chr20 28358571 28358612 -43795270 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2184 112 0 20 chr20 28358613 28358908 -43794974 - AluSp SINE Alu -24 289 1 1860 153 7 27 chr20 28358908 28359050 -43794832 - AluSx SINE Alu -174 138 1 34 0 0 0 chr20 28359055 28359089 -43794793 + AT_rich Low_complexity Low_complexity 1 34 0 464 260 49 0 chr20 28360897 28361020 -43792862 + MIR SINE MIR 6 134 -128 216 0 0 0 chr20 28361571 28361595 -43792287 + (T)n Simple_repeat Simple_repeat 1 24 0 224 359 29 10 chr20 28361659 28361762 -43792120 + MIR SINE MIR 20 124 -84 412 202 9 73 chr20 28362198 28362307 -43791575 - MER5A DNA MER1_type -83 106 5 1912 136 122 20 chr20 28363739 28364093 -43789789 + MLT1B LTR MaLR 1 390 0 1496 214 0 16 chr20 28367867 28368176 -43785706 - AluJo SINE Alu -8 304 1 733 294 174 9 chr20 28368267 28368686 -43785196 + L1MC4a LINE L1 5416 5903 -1905 25 51 0 0 chr20 28368854 28368893 -43784989 + AT_rich Low_complexity Low_complexity 1 39 0 1952 163 0 0 chr20 28368901 28369202 -43784680 - AluSx SINE Alu -11 301 1 1970 210 106 46 chr20 28369518 28370066 -43783816 - MLT1E LTR MaLR -1 592 12 288 317 69 14 chr20 28370636 28370781 -43783101 + L2 LINE L2 3159 3311 -2 213 324 7 3 chr20 28372276 28372374 -43781508 + MIR SINE MIR 51 147 -61 460 335 103 25 chr20 28372772 28373130 -43780752 + L2 LINE L2 2373 2758 -556 301 291 48 0 chr20 28373387 28373490 -43780392 - MLT1L LTR MaLR -2 613 506 229 289 13 26 chr20 28373805 28373881 -43780001 - MLT1L LTR MaLR -536 79 5 1043 247 21 29 chr20 28374011 28374290 -43779592 + L1MC4a LINE L1 7532 7808 0 230 216 81 36 chr20 28374555 28374666 -43779216 + HAL1b LINE L1 857 972 -376 906 211 23 0 chr20 28374672 28374847 -43779035 - FAM SINE Alu -1 48 1 1582 200 10 7 chr20 28374863 28375163 -43778719 - AluJb SINE Alu -11 301 1 427 274 40 97 chr20 28375166 28375590 -43778292 + HAL1b LINE L1 947 1346 -2 530 256 78 33 chr20 28376732 28377002 -43776880 - MER97c DNA MER1_type? -1 1089 808 1370 230 132 44 chr20 28377031 28377509 -43776373 - MER97a DNA MER1_type? -324 570 51 180 77 0 0 chr20 28378921 28378947 -43774935 + (TG)n Simple_repeat Simple_repeat 2 27 0 328 335 45 13 chr20 28378985 28379140 -43774742 + L3b LINE CR1 1292 1451 -132 885 197 14 0 chr20 28380773 28380920 -43772962 + FAM SINE Alu 1 149 -36 186 43 0 0 chr20 28380927 28380950 -43772932 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 301 280 42 85 chr20 28381087 28381276 -43772606 - MLT1J LTR MaLR -330 181 1 183 129 0 0 chr20 28381924 28381955 -43771927 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 790 253 111 58 chr20 28381985 28382400 -43771482 - LTR16A LTR ERVL -1 449 13 533 255 139 53 chr20 28382522 28382859 -43771023 - MLT1J LTR MaLR -145 366 1 459 283 14 0 chr20 28383055 28383200 -43770682 - MER5B DNA MER1_type -20 158 12 1873 173 0 3 chr20 28383227 28383540 -43770342 + AluJo SINE Alu 1 312 0 309 68 0 0 chr20 28383584 28383628 -43770254 + (TG)n Simple_repeat Simple_repeat 2 45 0 438 244 23 68 chr20 28383628 28383804 -43770078 - MLT1K LTR MaLR -27 561 394 751 276 108 51 chr20 28384134 28384661 -43769221 - L1ME3 LINE L1 -211 5951 5455 1614 183 7 18 chr20 28384661 28384946 -43768936 - AluJo SINE Alu -30 282 1 751 276 108 51 chr20 28384946 28385402 -43768480 - L1ME3 LINE L1 -707 5455 4904 1154 220 94 101 chr20 28385468 28385904 -43767978 - MLT1E LTR MaLR 0 593 135 1511 188 21 14 chr20 28385913 28386200 -43767682 + AluJb SINE Alu 23 311 -1 24 0 0 0 chr20 28386306 28386330 -43767552 + AT_rich Low_complexity Low_complexity 1 24 0 282 268 21 21 chr20 28386408 28386505 -43767377 - MLT1E LTR MaLR -557 97 1 1375 195 29 0 chr20 28386717 28386994 -43766888 + MLT2B1 LTR ERVL 1 285 -235 261 0 0 0 chr20 28389341 28389370 -43764512 + (CA)n Simple_repeat Simple_repeat 2 30 0 2137 133 0 0 chr20 28391376 28391670 -43762212 + AluSg SINE Alu 1 294 -16 268 283 9 38 chr20 28391703 28391809 -43762073 + MER103 DNA DNA 2 104 -62 433 210 38 57 chr20 28392973 28393130 -43760752 - LTR16A1 LTR ERVL 0 457 304 617 274 145 20 chr20 28393138 28393393 -43760489 - L2 LINE L2 -188 3125 2839 218 286 133 0 chr20 28393464 28393569 -43760313 + MIR3 SINE MIR 84 202 -6 1387 205 165 9 chr20 28393914 28393925 -43759957 - L1M4 LINE L1 -748 5398 5390 2408 193 44 10 chr20 28393925 28394423 -43759459 - L1MB7 LINE L1 -15 6667 6153 1387 205 165 9 chr20 28394423 28394835 -43759047 - L1M4 LINE L1 -756 5390 4909 29 0 0 0 chr20 28394849 28394878 -43759004 + AT_rich Low_complexity Low_complexity 1 29 0 660 200 70 19 chr20 28395936 28396151 -43757731 - L1MB7 LINE L1 -1676 4968 4743 * 2559 243 78 68 chr20 28396142 28397327 -43756555 - L1MB7 LINE L1 -3462 3182 1851 2247 122 3 0 chr20 28397327 28397638 -43756244 - AluSx SINE Alu 0 312 1 2559 243 78 68 chr20 28397638 28398328 -43755554 - L1MB7 LINE L1 -4793 1851 1169 2819 251 61 27 chr20 28398338 28399144 -43754738 - L1MB7 LINE L1 -5705 837 5 21 57 0 0 chr20 28400048 28400083 -43753799 + AT_rich Low_complexity Low_complexity 1 35 0 1068 295 65 25 chr20 28400731 28401299 -43752583 + L2 LINE L2 2729 3313 0 423 282 176 54 chr20 28401619 28402006 -43751876 + L2 LINE L2 2880 3313 0 2142 130 81 29 chr20 28402644 28402990 -43750892 - THE1B LTR MaLR 0 364 1 12351 102 4 6 chr20 28402990 28404573 -43749309 - THE1B-int LTR MaLR 0 1580 1 2174 114 79 26 chr20 28404575 28404917 -43748965 - THE1B LTR MaLR -2 362 3 801 311 42 9 chr20 28405623 28406051 -43747831 - L1M4 LINE L1 -2539 3607 3166 651 237 0 22 chr20 28406389 28406524 -43747358 - FLAM_C SINE Alu -1 132 1 243 61 0 0 chr20 28407147 28407180 -43746702 + (CA)n Simple_repeat Simple_repeat 2 34 0 2943 124 26 0 chr20 28407242 28407596 -43746286 - L1PB1 LINE L1 -4 6147 5779 492 18 0 0 chr20 28407596 28407653 -43746229 + (TA)n Simple_repeat Simple_repeat 1 57 0 2943 124 26 0 chr20 28407653 28407725 -43746157 - L1PB1 LINE L1 -372 5779 5710 2152 224 4 16 chr20 28407726 28408235 -43745647 + L1P LINE L1 4852 5354 -792 745 291 149 7 chr20 28408325 28408755 -43745127 - LTR16C LTR ERVL 0 491 1 5759 143 6 14 chr20 28408998 28410620 -43743262 - L1PA15 LINE L1 -1 6164 4542 860 276 105 84 chr20 28410711 28411284 -43742598 - MLT1G LTR MaLR 0 590 11 188 250 106 48 chr20 28411425 28411529 -43742353 + L2 LINE L2 3163 3272 0 181 250 19 39 chr20 28412095 28412147 -43741735 + L2 LINE L2 344 394 -2920 291 267 0 0 chr20 28413324 28413459 -43740423 + (CA)n Simple_repeat Simple_repeat 1 135 0 480 235 0 0 chr20 28413484 28413646 -43740236 + (CA)n Simple_repeat Simple_repeat 1 162 0 532 331 0 0 chr20 28413664 28413842 -43740040 + (CA)n Simple_repeat Simple_repeat 1 178 0 291 210 34 17 chr20 28413853 28413972 -43739910 + (CATATA)n Simple_repeat Simple_repeat 2 122 0 379 343 6 0 chr20 28413972 28414144 -43739738 + (CA)n Simple_repeat Simple_repeat 2 174 0 252 367 0 0 chr20 28414179 28414348 -43739534 + (CA)n Simple_repeat Simple_repeat 2 170 0 24 53 0 0 chr20 28414976 28415014 -43738868 + AT_rich Low_complexity Low_complexity 1 38 0 2790 149 24 20 chr20 28415279 28415783 -43738099 - L1MB3 LINE L1 -2 6181 5676 198 146 49 0 chr20 28415900 28415941 -43737941 - MER5B DNA MER1_type -134 44 2 1736 99 11 27 chr20 28416040 28416303 -43737579 - L1MA5 LINE L1 -336 5964 5706 284 235 26 0 chr20 28417079 28417163 -43736719 - MIR SINE MIR -68 140 60 189 248 60 68 chr20 28417163 28417193 -43736689 + L2 LINE L2 1390 1502 -1812 410 204 50 52 chr20 28418105 28418289 -43735593 - HsTC2 DNA Tc2 -3 1895 4 2219 116 3 0 chr20 28419742 28420053 -43733829 + AluSx SINE Alu 1 312 0 574 169 0 0 chr20 28420063 28420146 -43733736 + AluS SINE Alu 2 84 -228 2220 126 0 0 chr20 28420294 28420596 -43733286 - AluSq SINE Alu -11 302 1 22 35 0 0 chr20 28421060 28421089 -43732793 + AT_rich Low_complexity Low_complexity 1 29 0 316 192 50 10 chr20 28421262 28421361 -43732521 - L1MA4A LINE L1 -1 6302 6200 207 0 0 0 chr20 28421361 28421384 -43732498 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 225 0 0 0 chr20 28421383 28421408 -43732474 + (TA)n Simple_repeat Simple_repeat 1 25 0 2065 131 7 7 chr20 28421408 28421705 -43732177 - AluSx SINE Alu -15 297 1 895 234 21 4 chr20 28421705 28421944 -43731938 - L1MA4A LINE L1 -182 6121 5879 814 230 65 30 chr20 28423904 28424104 -43729778 - MSTD LTR MaLR -2 394 188 841 214 0 0 chr20 28424104 28424258 -43729624 - FRAM SINE Alu -21 155 2 683 237 54 21 chr20 28424259 28424445 -43729437 - MSTD LTR MaLR -204 192 1 6008 228 70 67 chr20 28424445 28425988 -43727894 - MSTD-int LTR MaLR 0 1735 184 2169 76 0 0 chr20 28425988 28426250 -43727632 + AluY SINE Alu 1 262 -49 6008 228 70 67 chr20 28426250 28426433 -43727449 - MSTD-int LTR MaLR -1551 184 3 1211 209 78 33 chr20 28426437 28426783 -43727099 - MSTD LTR MaLR -2 394 1 778 227 115 54 chr20 28427228 28427523 -43726359 + MLT1J1 LTR MaLR 64 376 -70 14297 113 23 30 chr20 28428222 28431072 -43722810 + L1MD2 LINE L1 3544 6358 -1 641 297 50 83 chr20 28431532 28432037 -43721845 - L2 LINE L2 0 3313 2826 725 316 163 38 chr20 28432655 28433392 -43720490 + L2 LINE L2 2448 3272 0 218 189 0 0 chr20 28433436 28433473 -43720409 + CT-rich Low_complexity Low_complexity 2 38 0 963 297 105 13 chr20 28437722 28438112 -43715770 + LTR16A1 LTR ERVL 26 451 -6 362 246 55 9 chr20 28439371 28439481 -43714401 + MLT1K LTR MaLR 349 463 -125 3918 214 38 37 chr20 28439950 28440383 -43713499 + L1MCb LINE L1 1 432 -6132 192 40 0 0 chr20 28440383 28440408 -43713474 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3918 214 38 37 chr20 28440408 28441789 -43712093 + L1MCb LINE L1 432 1930 -4634 711 177 0 33 chr20 28441831 28442000 -43711882 - L1MC/D LINE L1 -562 5782 5663 26 34 0 51 chr20 28442083 28442142 -43711740 + AT_rich Low_complexity Low_complexity 1 56 0 1479 202 59 24 chr20 28442184 28442384 -43711498 + L1MC2 LINE L1 5960 6178 -166 2265 92 0 20 chr20 28442384 28442687 -43711195 + AluY SINE Alu 2 298 -13 1479 202 59 24 chr20 28442687 28442823 -43711059 + L1MC2 LINE L1 6178 6308 -36 27907 43 5 2 chr20 28442872 28447100 -43706782 - L1PA4 LINE L1 0 6549 1933 244 25 75 0 chr20 28447414 28447454 -43706428 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6740 80 10 10 chr20 28447454 28448435 -43705447 - L1PA8 LINE L1 -22 6150 5172 2734 182 16 0 chr20 28449077 28449578 -43704304 - L1MC3 LINE L1 -15 7770 7262 454 314 98 18 chr20 28449661 28449931 -43703951 - ERVL LTR ERVL -185 5300 5047 903 277 60 18 chr20 28449986 28450322 -43703560 - ERVL LTR ERVL -826 4938 4589 2061 151 0 22 chr20 28450351 28450706 -43703176 - AluSx SINE Alu 0 348 1 453 288 22 33 chr20 28450720 28450904 -43702978 - ERVL LTR ERVL -1223 4541 4360 691 253 152 81 chr20 28450911 28451393 -43702489 - LTR33 LTR ERVL 0 521 6 1389 260 56 46 chr20 28452962 28453462 -43700420 - MLT1D LTR MaLR 0 505 1 994 270 118 6 chr20 28453976 28454332 -43699550 - LTR16C LTR ERVL 0 491 96 1589 125 155 10 chr20 28455706 28456009 -43697873 - L1PA13 LINE L1 -2 6161 5815 532 159 29 14 chr20 28456011 28456213 -43697669 + CT-rich Low_complexity Low_complexity 1 204 0 2166 127 0 0 chr20 28456213 28456513 -43697369 - AluSx SINE Alu -11 301 2 13327 130 20 150 chr20 28456515 28459740 -43694142 - L1PA13 LINE L1 -340 5828 3264 338 0 24 0 chr20 28459740 28459782 -43694100 + (TTG)n Simple_repeat Simple_repeat 2 44 0 13327 130 20 150 chr20 28459782 28460615 -43693267 - L1PA13 LINE L1 -2904 3264 2324 400 276 103 22 chr20 28461492 28461677 -43692205 + L1ME LINE L1 10 209 -5910 280 346 84 5 chr20 28461939 28462141 -43691741 + L1ME LINE L1 4941 5158 -971 285 29 0 0 chr20 28462206 28462240 -43691642 + (GA)n Simple_repeat Simple_repeat 2 35 0 491 281 95 32 chr20 28462250 28462712 -43691170 + L1ME LINE L1 5262 5756 -397 228 246 0 0 chr20 28463764 28463833 -43690049 + (CA)n Simple_repeat Simple_repeat 2 70 0 1635 154 7 40 chr20 28464897 28465195 -43688687 + AluJo SINE Alu 2 289 -23 274 356 171 19 chr20 28465272 28465800 -43688082 - L3 LINE CR1 -154 1423 816 386 305 8 15 chr20 28466227 28466358 -43687524 + LTR16C LTR ERVL 362 491 0 2345 168 72 2 chr20 28466797 28467197 -43686685 + MSTA LTR MaLR 1 428 0 210 118 0 0 chr20 28467653 28467687 -43686195 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2386 87 0 0 chr20 28469577 28469877 -43684005 - AluY SINE Alu -11 300 1 1037 214 78 0 chr20 28469956 28470199 -43683683 + L1MA8 LINE L1 6027 6288 -3 925 236 134 99 chr20 28470642 28471185 -43682697 - MLT1G LTR MaLR -33 557 1 2027 138 7 7 chr20 28471742 28472046 -43681836 + AluSx SINE Alu 9 312 0 1067 288 91 11 chr20 28473133 28473508 -43680374 - LTR16C LTR ERVL -14 477 73 8070 236 12 4 chr20 28473698 28475563 -43678319 + L1PA15 LINE L1 2761 4640 -1506 5315 135 17 19 chr20 28475556 28476417 -43677465 + L1PA15 LINE L1 5304 6163 -2 * 695 169 8 0 chr20 28476488 28476606 -43677276 - L1MA10 LINE L1 -2 6332 6214 2255 101 0 7 chr20 28477419 28477717 -43676165 - AluSg SINE Alu -9 301 6 684 239 33 11 chr20 28479102 28479282 -43674600 + MER5A DNA MER1_type 1 184 -5 1047 308 40 0 chr20 28479407 28479728 -43674154 + LTR16C LTR ERVL 146 479 -12 690 209 7 7 chr20 28480229 28480377 -43673505 - LTR32 LTR ERVL 0 471 324 1770 158 20 69 chr20 28480391 28480502 -43673380 - LTR32 LTR ERVL -126 345 230 2231 110 0 7 chr20 28480502 28480802 -43673080 - AluSx SINE Alu -14 298 1 1770 158 20 69 chr20 28480802 28481038 -43672844 - LTR32 LTR ERVL -241 230 15 1075 297 71 2 chr20 28481944 28482365 -43671517 + LTR16C LTR ERVL 42 491 0 874 318 135 38 chr20 28482647 28483612 -43670270 - L2 LINE L2 -518 2796 1739 229 302 139 62 chr20 28484974 28485103 -43668779 - L2 LINE L2 0 3272 3134 21 82 0 0 chr20 28485287 28485336 -43668546 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr20 28485380 28485403 -43668479 + AT_rich Low_complexity Low_complexity 1 23 0 12075 185 8 22 chr20 28485623 28486779 -43667103 - L1PB1 LINE L1 -4 6863 5693 2017 119 13 29 chr20 28486779 28487090 -43666792 - AluSx SINE Alu -2 310 5 12075 185 8 22 chr20 28487090 28489555 -43664327 - L1PB1 LINE L1 -1174 5693 3295 245 216 0 0 chr20 28489544 28489595 -43664287 - L1P LINE L1 -2057 4089 4039 * 4094 223 93 3 chr20 28489612 28490646 -43663236 - L1PB1 LINE L1 -5706 1157 31 3150 198 51 11 chr20 28490658 28491458 -43662424 - L1MD3 LINE L1 -4 7991 6951 221 0 0 33 chr20 28491629 28491659 -43662223 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 227 332 85 68 chr20 28492122 28492712 -43661170 + L2 LINE L2 2351 2950 -364 586 240 160 0 chr20 28492761 28492911 -43660971 + MER5A DNA MER1_type 10 183 -6 323 266 32 21 chr20 28493116 28493210 -43660672 - L2 LINE L2 -5 3267 3173 180 387 52 23 chr20 28493476 28493649 -43660233 - L3 LINE CR1 -11 1566 1389 1906 151 20 7 chr20 28493812 28494117 -43659765 - AluSx SINE Alu -3 309 1 271 313 36 71 chr20 28494216 28494328 -43659554 - LTR16C LTR ERVL -277 214 107 245 29 29 0 chr20 28496067 28496101 -43657781 + (CA)n Simple_repeat Simple_repeat 1 35 0 508 246 55 55 chr20 28496644 28496827 -43657055 - MER5A DNA MER1_type 0 189 7 183 156 0 0 chr20 28498582 28498614 -43655268 + CT-rich Low_complexity Low_complexity 2 33 0 219 360 27 9 chr20 28499905 28500016 -43653866 + L2 LINE L2 2563 2675 -639 913 199 54 50 chr20 28500317 28500578 -43653304 - L1MD3 LINE L1 0 7995 7734 2413 146 23 50 chr20 28500581 28501019 -43652863 + Tigger2a DNA MER2_type 1 426 -8 415 267 52 7 chr20 28501024 28501159 -43652723 - L1MD3 LINE L1 -261 7734 7594 21 36 0 0 chr20 28501408 28501436 -43652446 + AT_rich Low_complexity Low_complexity 1 28 0 230 71 0 48 chr20 28502761 28502803 -43651079 + (CATA)n Simple_repeat Simple_repeat 2 41 0 2051 63 0 4 chr20 28503662 28503916 -43649966 + AluY SINE Alu 44 296 -15 440 329 74 18 chr20 28503982 28504319 -43649563 - L1M4 LINE L1 -2106 4040 3685 1295 203 78 73 chr20 28505149 28505528 -43648354 - MLT2B1 LTR ERVL 0 397 1 289 264 165 8 chr20 28505528 28505649 -43648233 - L1M4 LINE L1 -3331 2815 2676 190 316 88 0 chr20 28506029 28506086 -43647796 + MIR SINE MIR 6 67 -195 190 347 0 13 chr20 28506130 28506205 -43647677 + MIR SINE MIR 189 262 0 24 32 0 0 chr20 28506206 28506237 -43647645 + AT_rich Low_complexity Low_complexity 1 31 0 5740 246 31 40 chr20 28506955 28507156 -43646726 - L1 LINE L1 -2055 3915 3714 2279 85 0 0 chr20 28507156 28507463 -43646419 - AluSg SINE Alu 0 307 1 5740 246 31 40 chr20 28507463 28509197 -43644685 - L1 LINE L1 -2256 3714 1996 3742 242 51 38 chr20 28509193 28510597 -43643285 - L1 LINE L1 -4189 1781 365 * 387 41 0 0 chr20 28510656 28510705 -43643177 + (TG)n Simple_repeat Simple_repeat 2 50 0 438 323 67 70 chr20 28510875 28511262 -43642620 - L1 LINE L1 -5505 386 1 1267 303 26 16 chr20 28512084 28512467 -43641415 - LTR16C LTR ERVL -29 462 76 258 345 57 48 chr20 28513922 28514131 -43639751 - L2 LINE L2 -3 3269 3059 1167 252 47 47 chr20 28514327 28514851 -43639031 - MLT1E LTR MaLR 0 593 19 2380 80 0 40 chr20 28515682 28516006 -43637876 - AluY SINE Alu 0 311 1 466 268 8 16 chr20 28516019 28516146 -43637736 - L2 LINE L2 -1 3312 3187 2283 233 117 20 chr20 28516183 28516887 -43636995 + L1MC4 LINE L1 7271 8042 0 252 384 46 9 chr20 28518570 28518789 -43635093 - MIR SINE MIR -28 234 8 1445 233 88 9 chr20 28519038 28519471 -43634411 - Charlie4a DNA MER1_type -8 500 34 1441 236 53 17 chr20 28520381 28520742 -43633140 - MLT1A2 LTR MaLR 0 374 1 2475 183 31 86 chr20 28520803 28521383 -43632499 + MLT2B3 LTR ERVL 1 548 -6 24 0 0 0 chr20 28521481 28521505 -43632377 + AT_rich Low_complexity Low_complexity 1 24 0 257 280 10 40 chr20 28521508 28521608 -43632274 - HAL1b LINE L1 -54 1294 1198 201 303 90 8 chr20 28522731 28522853 -43631029 - MIR3 SINE MIR -75 133 2 441 276 52 15 chr20 28524274 28524408 -43629474 + MER3 DNA MER1_type 1 139 -70 186 71 0 0 chr20 28524500 28524528 -43629354 + (TATTG)n Simple_repeat Simple_repeat 2 29 0 330 139 42 42 chr20 28524547 28524619 -43629263 + MER3 DNA MER1_type 136 207 -2 * 334 149 15 45 chr20 28524576 28524643 -43629239 - MER3 DNA MER1_type -117 92 28 257 329 81 31 chr20 28524821 28524982 -43628900 - MIR3 SINE MIR -10 198 30 1105 191 13 40 chr20 28525298 28525523 -43628359 + MER20 DNA MER1_type 1 219 0 1190 188 41 103 chr20 28525965 28526402 -43627480 - LTR37A LTR ERV1 0 426 17 552 351 57 25 chr20 28526476 28526949 -43626933 - L2 LINE L2 -1622 1692 1205 1715 221 82 33 chr20 28526953 28527114 -43626768 + L1MD1 LINE L1 4775 4927 -1219 291 54 0 0 chr20 28527114 28527151 -43626731 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1715 221 82 33 chr20 28527151 28527564 -43626318 + L1MD1 LINE L1 4927 5377 -769 1455 194 46 22 chr20 28527570 28527894 -43625988 + L1MD1 LINE L1 5909 6240 -2 691 275 211 51 chr20 28527895 28528644 -43625238 - L2 LINE L2 -2098 1216 348 780 204 7 0 chr20 28528645 28528787 -43625095 + MER5A DNA MER1_type 3 145 -44 2048 119 7 7 chr20 28529052 28529355 -43624527 + AluSq SINE Alu 1 303 -10 1056 208 68 24 chr20 28529763 28530013 -43623869 + MIR SINE MIR 2 262 0 280 250 75 0 chr20 28532787 28532867 -43621015 - MER5A DNA MER1_type 0 189 104 2885 90 0 3 chr20 28532996 28533352 -43620530 + THE1A LTR MaLR 1 355 0 1214 77 0 0 chr20 28533352 28533507 -43620375 + THE1A-int LTR MaLR 1 155 -1425 1681 197 37 40 chr20 28534266 28534641 -43619241 + MLT1A2 LTR MaLR 1 374 0 1653 190 3 7 chr20 28535353 28535643 -43618239 - AluJo SINE Alu -23 289 1 1091 149 139 0 chr20 28536630 28536831 -43617051 + LTR47A LTR ERVL 16 244 -208 527 158 0 0 chr20 28536867 28536949 -43616933 + MER4B-int LTR ERV1 2645 2726 -3220 332 203 14 0 chr20 28536980 28537049 -43616833 + MER34C LTR ERV1 155 224 -361 2229 128 91 13 chr20 28537061 28537444 -43616438 - MER4D LTR ERV1 -308 595 183 668 133 0 20 chr20 28537444 28537542 -43616340 + FLAM_A SINE Alu 35 130 -12 1173 137 16 5 chr20 28537542 28537732 -43616150 - MER4B LTR ERV1 -418 192 1 5534 157 55 23 chr20 28537737 28538796 -43615086 + MER4B-int LTR ERV1 2915 4007 -2751 378 216 0 68 chr20 28538810 28538898 -43614984 + MER4B-int LTR ERV1 5977 6058 -700 1699 190 78 59 chr20 28538913 28539335 -43614547 + LTR47A LTR ERVL 1 430 -22 488 250 158 0 chr20 28539878 28540042 -43613840 - L1M4 LINE L1 -2118 4028 3839 14979 202 32 7 chr20 28540084 28546599 -43607283 + L1PB1 LINE L1 6 6859 -8 1590 178 70 7 chr20 28546601 28546871 -43607011 - AluSx SINE Alu -23 289 3 682 253 51 54 chr20 28546871 28547105 -43606777 - L1M4 LINE L1 -2299 3847 3613 3192 132 78 5 chr20 28547105 28547667 -43606215 + LTR26 LTR ERV1 1 603 0 682 253 51 54 chr20 28547667 28547748 -43606134 - L1M4 LINE L1 -2533 3613 3533 1014 233 32 13 chr20 28549263 28549663 -43604219 + Charlie4a DNA MER1_type 49 493 -15 324 143 143 14 chr20 28551148 28551218 -43602664 + MLT1G1 LTR MaLR 103 181 -414 1110 241 82 11 chr20 28551218 28551583 -43602299 + L1M4 LINE L1 3626 4016 -2130 * 1955 221 85 55 chr20 28551581 28551826 -43602056 - L1MDa LINE L1 -5924 616 380 3353 182 16 3 chr20 28551826 28552442 -43601440 - L1PB4 LINE L1 -1 6155 5532 1955 221 85 55 chr20 28552442 28552774 -43601108 - L1MDa LINE L1 -6160 380 22 313 296 98 80 chr20 28552772 28553291 -43600591 - HAL1 LINE L1 -850 1657 1116 * 1240 219 131 27 chr20 28553291 28553437 -43600445 + MLT1A1 LTR MaLR 1 130 -235 2175 104 0 7 chr20 28553437 28553752 -43600130 + AluSc SINE Alu 1 313 0 1240 219 131 27 chr20 28553752 28553931 -43599951 + MLT1A1 LTR MaLR 130 362 -3 313 296 98 80 chr20 28553931 28554257 -43599625 - HAL1 LINE L1 -1391 1116 797 914 253 67 14 chr20 28554260 28554716 -43599166 + LTR33 LTR ERVL 1 513 -8 2123 173 10 30 chr20 28554807 28555205 -43598677 - MLT1B LTR MaLR 0 390 1 2194 124 50 19 chr20 28555799 28556163 -43597719 - THE1C LTR MaLR 0 375 1 1118 184 74 220 chr20 28556648 28556922 -43596960 - L1MC3 LINE L1 -2 7993 7681 972 182 0 0 chr20 28556922 28557076 -43596806 - FRAM SINE Alu -22 154 1 1118 184 74 220 chr20 28557076 28557434 -43596448 - L1MC3 LINE L1 -314 7681 7323 2616 53 0 0 chr20 28559151 28559452 -43594430 - AluY SINE Alu -10 301 1 228 279 8 33 chr20 28559625 28559686 -43594196 + (TG)n Simple_repeat Simple_repeat 1 59 -60 980 147 32 37 chr20 28559686 28559876 -43594006 + MER53 DNA DNA 1 189 0 228 279 8 33 chr20 28559876 28559936 -43593946 + (TG)n Simple_repeat Simple_repeat 59 119 0 1150 192 213 0 chr20 28560332 28560572 -43593310 + AluJo SINE Alu 1 291 -21 44628 44 4 0 chr20 28560990 28567118 -43586764 - L1PA4 LINE L1 -2 6153 2 232 269 167 0 chr20 28568188 28568266 -43585616 + MLT1L LTR MaLR 190 280 -335 353 314 124 31 chr20 28569127 28569515 -43584367 - MLT1L LTR MaLR -2 613 190 411 271 110 0 chr20 28570845 28571000 -43582882 + MER5A DNA MER1_type 18 189 0 306 0 0 0 chr20 28571078 28571112 -43582770 + (TG)n Simple_repeat Simple_repeat 2 35 0 185 314 0 47 chr20 28571396 28571482 -43582400 - L2 LINE L2 -1 3271 3190 1486 244 25 8 chr20 28573528 28573885 -43579997 - MLT1A1 LTR MaLR 0 365 3 447 314 27 50 chr20 28574674 28574894 -43578988 + LTR16C LTR ERVL 127 341 -150 309 241 46 19 chr20 28574936 28575044 -43578838 + LTR16C LTR ERVL 350 460 -31 1934 221 106 8 chr20 28575565 28576077 -43577805 - REP3 LTR ERV 0 562 1 1469 220 51 61 chr20 28576204 28576599 -43577283 - MLT2B1 LTR ERVL 0 520 130 207 0 0 0 chr20 28576637 28576660 -43577222 + (CAAT)n Simple_repeat Simple_repeat 1 23 0 631 304 103 22 chr20 28578469 28578801 -43575081 + L1M4 LINE L1 4760 5139 -1007 1067 167 12 69 chr20 28578801 28579047 -43574835 - MER46A DNA MER2_type 0 236 5 631 304 103 22 chr20 28579047 28579162 -43574720 + L1M4 LINE L1 5139 5243 -903 344 233 67 112 chr20 28579217 28579440 -43574442 - MIR SINE MIR 0 262 50 331 322 0 0 chr20 28579486 28579601 -43574281 + (TCCA)n Simple_repeat Simple_repeat 4 118 0 1962 167 11 59 chr20 28579601 28579883 -43573999 + LTR53 LTR ERVL 1 262 -257 1852 139 26 20 chr20 28579883 28580052 -43573830 - AluJb SINE Alu -8 304 131 228 35 0 0 chr20 28580052 28580081 -43573801 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1852 139 26 20 chr20 28580081 28580213 -43573669 - AluJb SINE Alu -181 131 1 1962 167 11 59 chr20 28580213 28580301 -43573581 + LTR53 LTR ERVL 262 353 -166 1598 183 3 10 chr20 28580496 28580786 -43573096 + AluJb SINE Alu 1 288 -24 203 194 45 30 chr20 28581463 28581530 -43572352 + MER5B DNA MER1_type 106 173 -5 263 223 21 64 chr20 28582429 28582523 -43571359 + L1MC4 LINE L1 6614 6703 -1339 234 222 0 0 chr20 28582523 28582577 -43571305 + (TA)n Simple_repeat Simple_repeat 2 55 0 308 276 23 0 chr20 28582582 28582669 -43571213 + L1MC4 LINE L1 6615 6703 -1339 229 263 0 53 chr20 28582679 28582774 -43571108 + L1MC4 LINE L1 6614 6703 -1339 1841 163 0 0 chr20 28584123 28584411 -43569471 + AluSx SINE Alu 24 311 -1 383 275 45 110 chr20 28585484 28585684 -43568198 + MER102b DNA MER1_type 155 341 0 888 150 0 0 chr20 28587233 28587360 -43566522 + AluSq/x SINE Alu 1 127 -185 2120 110 41 0 chr20 28587398 28587688 -43566194 + AluSq SINE Alu 1 302 -11 241 326 52 22 chr20 28587690 28587825 -43566057 - L2 LINE L2 -351 2962 2824 2393 113 0 0 chr20 28587922 28588231 -43565651 - AluSq SINE Alu -4 309 1 2694 205 2 4 chr20 28588583 28589070 -43564812 - MER66B LTR ERV1 0 486 1 207 306 94 0 chr20 28589600 28589685 -43564197 - MIR SINE MIR -168 94 2 543 303 73 14 chr20 28639966 28640322 -43513560 + L1ME4a LINE L1 5490 5866 -255 187 324 0 0 chr20 28641951 28642019 -43511863 - MIR SINE MIR -24 238 171 1243 193 4 4 chr20 28642246 28642511 -43511371 + L1M4 LINE L1 3978 4242 -1904 261 98 0 0 chr20 28642517 28642558 -43511324 + (CA)n Simple_repeat Simple_repeat 1 41 0 1669 213 22 36 chr20 28642684 28643186 -43510696 + L1M4 LINE L1 4272 4766 -1380 * 5077 156 26 7 chr20 28643182 28643705 -43510177 + L1PA16 LINE L1 4956 5468 -698 1953 141 3 16 chr20 28643705 28644009 -43509873 + AluSq SINE Alu 3 302 -11 5077 156 26 7 chr20 28644009 28644202 -43509680 + L1PA16 LINE L1 5468 5656 -510 285 29 0 0 chr20 28644202 28644236 -43509646 + (CA)n Simple_repeat Simple_repeat 2 35 0 5077 156 26 7 chr20 28644236 28644704 -43509178 + L1PA16 LINE L1 5656 6164 -2 2257 217 18 7 chr20 28644699 28645317 -43508565 + L1M4 LINE L1 4745 5369 -777 * 650 264 85 46 chr20 28645322 28645629 -43508253 - L1MEc LINE L1 -5826 570 252 759 209 71 5 chr20 28645738 28645876 -43508006 - L1MEc LINE L1 -6153 243 87 228 35 0 0 chr20 28645876 28645905 -43507977 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 759 209 71 5 chr20 28645905 28645962 -43507920 - L1MEc LINE L1 -6309 87 35 288 279 70 47 chr20 28646605 28646734 -43507148 - MIR3 SINE MIR -36 172 41 236 150 0 0 chr20 28647374 28647414 -43506468 + L1M4 LINE L1 2784 2823 -3323 272 79 80 0 chr20 28647682 28647735 -43506147 - L1MC2 LINE L1 0 6333 6275 434 308 84 28 chr20 28648794 28649008 -43504874 + MIR SINE MIR 14 239 -23 402 147 157 172 chr20 28649593 28649624 -43504258 - L2 LINE L2 -2 3311 3281 2045 186 49 14 chr20 28649624 28650069 -43503813 + MER65C LTR ERV1 1 461 0 402 147 157 172 chr20 28650069 28650235 -43503647 - L2 LINE L2 -32 3281 3117 1138 203 65 76 chr20 28651206 28651679 -43502203 + LTR37B LTR ERV1 1 468 0 2061 189 76 57 chr20 28651722 28652342 -43501540 + MER92B LTR ERV1 4 635 -1 359 310 158 0 chr20 28652511 28652669 -43501213 + MER5A DNA MER1_type 7 189 0 260 314 57 16 chr20 28653384 28653508 -43500374 + MIR SINE MIR 22 150 -58 516 287 44 6 chr20 28653518 28653699 -43500183 - MER5A DNA MER1_type -1 188 1 199 259 24 59 chr20 28653767 28653852 -43500030 + MER5B DNA MER1_type 97 178 0 * 214 261 31 15 chr20 28653852 28653905 -43499977 + MIR3 SINE MIR 154 207 -1 488 303 27 5 chr20 28654028 28654213 -43499669 + MER5A DNA MER1_type 1 189 0 222 289 206 0 chr20 28654658 28654755 -43499127 + MER5B DNA MER1_type 55 171 -7 228 254 34 17 chr20 28654796 28654855 -43499027 + MIR SINE MIR 78 137 -71 183 387 97 0 chr20 28654873 28654966 -43498916 + L2 LINE L2 3206 3307 -6 264 314 25 8 chr20 28654977 28655095 -43498787 + MIR SINE MIR 143 262 0 341 325 26 32 chr20 28656007 28656161 -43497721 + MIR SINE MIR 20 172 -90 1721 211 20 9 chr20 28656170 28656511 -43497371 + MLT1A1 LTR MaLR 10 354 -11 4023 245 107 31 chr20 28656522 28657788 -43496094 + MLT1A1-int LTR MaLR 5 1366 -5 1822 194 19 8 chr20 28657801 28658162 -43495720 + MLT1A1 LTR MaLR 1 365 0 224 294 52 94 chr20 28658389 28658719 -43495163 + L2 LINE L2 2560 2875 -439 210 113 38 19 chr20 28660447 28660500 -43493382 + (TA)n Simple_repeat Simple_repeat 2 55 0 690 204 105 12 chr20 28660505 28660677 -43493205 - MER33 DNA MER1_type -136 188 1 398 173 51 64 chr20 28660755 28660911 -43492971 + L1M4 LINE L1 3690 3843 -2303 365 244 45 58 chr20 28660912 28661068 -43492814 + L1ME4a LINE L1 5935 6088 -33 219 130 87 0 chr20 28661097 28661143 -43492739 + A-rich Low_complexity Low_complexity 2 51 0 241 303 53 20 chr20 28661498 28661650 -43492232 + L1 LINE L1 3692 3848 -2298 479 230 12 91 chr20 28661716 28661881 -43492001 + MLT1A1 LTR MaLR 2 153 -352 917 224 25 25 chr20 28661883 28662128 -43491754 + MLT1D LTR MaLR 261 505 0 782 173 6 22 chr20 28663505 28663663 -43490219 + MER2 DNA MER2_type 1 154 -162 355 204 191 57 chr20 28663821 28663978 -43489904 + MER5A DNA MER1_type 9 186 -3 293 290 153 16 chr20 28664224 28664348 -43489534 + MIR SINE MIR 72 212 -50 347 257 0 64 chr20 28664378 28664395 -43489487 + L1MC4 LINE L1 6602 6619 -1423 2409 105 30 8 chr20 28664395 28664757 -43489125 - L1PB1 LINE L1 0 6867 6498 347 257 0 64 chr20 28664757 28664848 -43489034 + L1MC4 LINE L1 6619 6703 -1339 14705 158 36 10 chr20 28664849 28670259 -43483623 - L1PB1 LINE L1 -360 6507 965 866 221 128 46 chr20 28670663 28671029 -43482853 - MSTD LTR MaLR 0 396 1 1557 149 166 3 chr20 28671546 28671853 -43482029 + MLT1B LTR MaLR 2 358 -32 1768 162 33 30 chr20 28671853 28672187 -43481695 + MER2 DNA MER2_type 1 335 -10 313 125 77 106 chr20 28673381 28673485 -43480397 + MIR SINE MIR 107 207 -55 260 313 125 18 chr20 28675086 28675198 -43478684 + MIR SINE MIR 103 226 -36 2001 129 26 7 chr20 28675235 28675538 -43478344 + MLT2A2 LTR ERVL 1 309 -144 2000 171 28 6 chr20 28675625 28675982 -43477900 + MLT1A1 LTR MaLR 1 365 0 355 263 179 45 chr20 28676081 28676305 -43477577 + Charlie7 DNA MER1_type 1 254 -2358 1756 229 123 48 chr20 28676450 28677335 -43476547 + Charlie7 DNA MER1_type 1618 2569 -43 232 336 8 42 chr20 28679366 28679485 -43474397 + LTR37B LTR ERV1 8 122 -346 1154 202 214 59 chr20 28679490 28679972 -43473910 + MLT1F1 LTR MaLR 1 650 -4 236 178 0 0 chr20 28679980 28680025 -43473857 + LTR37B LTR ERV1 154 198 -270 345 238 119 0 chr20 28680160 28680286 -43473596 + LTR37B LTR ERV1 328 468 0 1879 193 100 32 chr20 28681285 28681345 -43472537 - MLT1D LTR MaLR -8 497 443 2185 91 0 23 chr20 28681345 28681653 -43472229 + AluSq SINE Alu 1 301 -12 1879 193 100 32 chr20 28681653 28682033 -43471849 - MLT1D LTR MaLR -62 443 27 1324 242 60 11 chr20 28682146 28682493 -43471389 - MLT1H LTR MaLR -173 376 13 781 230 56 56 chr20 28683231 28683587 -43470295 - L1MC4 LINE L1 0 8042 7687 16732 125 33 3 chr20 28684658 28687306 -43466576 - L1P LINE L1 -1103 5043 2316 1614 164 8 0 chr20 28687306 28687568 -43466314 - MER50 LTR ERV1 -470 264 1 1978 134 7 0 chr20 28687583 28687882 -43466000 - AluSx SINE Alu -11 301 1 423 288 106 61 chr20 28687905 28688283 -43465599 + L1ME2 LINE L1 5470 5864 -300 * 759 164 93 0 chr20 28688278 28688438 -43465444 + L1MB3 LINE L1 5959 6143 -36 1346 176 10 67 chr20 28688544 28688856 -43465026 - AluJb SINE Alu -18 294 1 1340 224 94 0 chr20 28689718 28690026 -43463856 - MER58B DNA MER1_type -4 337 1 286 308 94 0 chr20 28690304 28690421 -43463461 - MIR SINE MIR -125 137 10 4269 6 2 0 chr20 28690457 28690928 -43462954 - L1PA2 LINE L1 -176 5979 5508 1513 6 0 0 chr20 28690928 28691094 -43462788 + L1PA2 LINE L1 5980 6146 -9 2517 154 14 49 chr20 28691094 28691581 -43462301 + MER101 LTR ERV1 5 474 0 672 176 0 0 chr20 28692805 28693100 -43460782 + (TG)n Simple_repeat Simple_repeat 1 295 0 425 256 23 23 chr20 28693100 28693272 -43460610 + LTR16C LTR ERVL 272 443 -48 218 268 0 0 chr20 28693837 28693893 -43459989 - MIR SINE MIR -114 148 93 441 301 39 39 chr20 28695509 28695715 -43458167 - L1ME4a LINE L1 -11 6110 5905 532 288 76 25 chr20 28695862 28696162 -43457720 - L1M3 LINE L1 -463 5717 5397 22 0 0 0 chr20 28696342 28696364 -43457518 + AT_rich Low_complexity Low_complexity 1 22 0 763 131 12 88 chr20 28696417 28696577 -43457305 - MER65A LTR ERV1 0 445 298 299 311 24 53 chr20 28697565 28697639 -43456243 - L1ME4a LINE L1 -387 5734 5659 1957 144 3 3 chr20 28697639 28697951 -43455931 - AluSx SINE Alu 0 312 1 299 311 24 53 chr20 28697951 28698120 -43455762 - L1ME4a LINE L1 -462 5659 5493 2455 67 3 0 chr20 28698167 28698465 -43455417 - AluY SINE Alu -12 299 1 264 222 83 65 chr20 28699112 28699220 -43454662 + L2 LINE L2 3197 3306 -7 1658 179 3 13 chr20 28699776 28700077 -43453805 + AluJb SINE Alu 14 311 -1 223 348 11 0 chr20 28700338 28700430 -43453452 + L3 LINE CR1 696 788 -789 276 301 41 0 chr20 28700438 28700511 -43453371 - L3 LINE CR1 -88 1489 1414 1145 176 65 29 chr20 28700578 28700856 -43453026 - L1MA9 LINE L1 -22 6290 6003 182 289 184 0 chr20 28700913 28700989 -43452893 - MER5B DNA MER1_type -15 163 74 1211 223 144 3 chr20 28700996 28701372 -43452510 + MER63B DNA MER1_type 1 429 -7 1020 141 0 0 chr20 28701883 28702060 -43451822 + (GGGA)n Simple_repeat Simple_repeat 4 180 0 298 269 96 58 chr20 28702163 28702319 -43451563 - MIR SINE MIR -45 217 56 183 289 107 27 chr20 28702371 28702520 -43451362 - L2 LINE L2 -95 3218 3058 296 274 26 26 chr20 28702540 28702653 -43451229 + MLT1F1 LTR MaLR 35 147 -420 348 152 0 0 chr20 28702829 28702895 -43450987 + (TG)n Simple_repeat Simple_repeat 1 66 0 1215 213 69 33 chr20 28703628 28703990 -43449892 - MLT1C LTR MaLR 0 467 93 249 273 93 70 chr20 28704954 28705126 -43448756 - MIR SINE MIR -69 193 18 360 240 257 0 chr20 28706079 28706258 -43447624 + HAL1 LINE L1 1312 1536 -971 828 131 0 148 chr20 28706283 28706486 -43447396 + AluSg/x SINE Alu 132 308 0 1665 266 82 11 chr20 28706488 28706540 -43447342 + HAL1 LINE L1 1548 1595 -912 1930 182 45 8 chr20 28706540 28706892 -43446990 - MLT1A1 LTR MaLR 0 365 1 1665 266 82 11 chr20 28706892 28707462 -43446420 + HAL1 LINE L1 1595 2214 -293 270 194 0 0 chr20 28707476 28707538 -43446344 + (TG)n Simple_repeat Simple_repeat 1 62 0 383 278 26 64 chr20 28708085 28708351 -43445531 + HAL1 LINE L1 2241 2496 -11 23 33 0 0 chr20 28708666 28708696 -43445186 + AT_rich Low_complexity Low_complexity 1 30 0 246 271 0 0 chr20 28708699 28708758 -43445124 - MIR SINE MIR 0 262 204 207 0 0 0 chr20 28708758 28708781 -43445101 + (T)n Simple_repeat Simple_repeat 1 23 0 8046 8 0 0 chr20 28709426 28710775 -43443107 - L1PA2 LINE L1 0 6155 4806 206 329 24 0 chr20 28710797 28710879 -43443003 - MIR SINE MIR -77 185 102 1652 192 24 55 chr20 28711185 28711414 -43442468 - MLT1B LTR MaLR -21 369 155 1944 107 0 0 chr20 28711414 28711666 -43442216 - AluSx SINE Alu 0 312 61 1652 192 24 55 chr20 28711666 28711817 -43442065 - MLT1B LTR MaLR -235 155 1 1205 171 10 0 chr20 28712742 28712947 -43440935 - MER7A DNA MER2_type -140 206 2 5188 147 32 6 chr20 28712962 28713893 -43439989 + L1MC2 LINE L1 5254 6208 -136 240 241 98 18 chr20 28713895 28714007 -43439875 + MER34B LTR ERV1 1 121 -444 420 297 10 63 chr20 28714093 28714237 -43439645 + MER34B LTR ERV1 279 400 -165 2546 65 0 0 chr20 28714237 28714543 -43439339 + AluY SINE Alu 1 306 -5 420 297 10 63 chr20 28714543 28714701 -43439181 + MER34B LTR ERV1 400 565 0 356 187 37 47 chr20 28714723 28714830 -43439052 + L1MC2 LINE L1 6239 6344 0 183 129 0 0 chr20 28714874 28714905 -43438977 + (GGA)n Simple_repeat Simple_repeat 3 33 0 942 235 16 12 chr20 28714958 28715209 -43438673 + L1ME2 LINE L1 5912 6163 -1 1512 279 90 26 chr20 28716643 28717252 -43436630 - L1ME1 LINE L1 -5 6161 5514 357 24 0 0 chr20 28717480 28717522 -43436360 + (TG)n Simple_repeat Simple_repeat 2 43 0 308 203 0 0 chr20 28717755 28717819 -43436063 + MIR SINE MIR 102 165 -97 397 281 83 55 chr20 28718257 28718474 -43435408 + LTR16C LTR ERVL 77 299 -192 520 277 20 80 chr20 28718792 28719041 -43434841 - L2 LINE L2 -2 3311 3078 574 206 176 61 chr20 28719190 28719355 -43434527 + MER5A DNA MER1_type 1 184 -5 2328 69 0 17 chr20 28719521 28719809 -43434073 + AluSg SINE Alu 27 309 -1 331 327 39 19 chr20 28719843 28719999 -43433883 + HAL1 LINE L1 1494 1652 -855 304 191 35 78 chr20 28720494 28720609 -43433273 + L1M4c LINE L1 2367 2476 -3908 181 136 23 23 chr20 28721386 28721430 -43432452 + CT-rich Low_complexity Low_complexity 1 44 0 498 119 40 10 chr20 28721474 28721575 -43432307 + CT-rich Low_complexity Low_complexity 1 104 0 306 179 19 9 chr20 28722395 28722501 -43431381 + (TG)n Simple_repeat Simple_repeat 2 108 0 306 0 0 0 chr20 28726456 28726490 -43427392 + (TG)n Simple_repeat Simple_repeat 1 34 0 204 40 0 0 chr20 28726489 28726514 -43427368 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 210 37 0 0 chr20 28730068 28730095 -43423787 + (CAG)n Simple_repeat Simple_repeat 1 27 0 261 253 100 1 chr20 28731157 28731397 -43422485 - LTR16C LTR ERVL -9 482 190 3548 184 38 0 chr20 28731439 28732145 -43421737 + MER54A LTR ERVL 169 901 0 235 318 151 62 chr20 28732468 28732871 -43421011 - L2 LINE L2 0 3272 2834 182 250 111 28 chr20 28733888 28733960 -43419922 + MIR3 SINE MIR 114 191 -17 24 53 0 0 chr20 28734873 28734911 -43418971 + AT_rich Low_complexity Low_complexity 1 38 0 1353 241 64 5 chr20 28734957 28735334 -43418548 + MER97a DNA MER1_type? 486 884 -10 1374 176 104 31 chr20 28735424 28735713 -43418169 + AluJb SINE Alu 1 310 -2 361 269 35 60 chr20 28735715 28735916 -43417966 + MIR SINE MIR 33 228 -34 231 279 58 76 chr20 28735995 28736167 -43417715 + MIR SINE MIR 65 233 -29 463 249 71 0 chr20 28737212 28737367 -43416515 + MIR SINE MIR 56 228 -34 422 276 52 57 chr20 28739394 28739604 -43414278 + Charlie8 DNA MER1_type 3 211 -2206 1516 92 55 5 chr20 28739766 28739984 -43413898 - MER30 DNA MER1_type 0 230 2 381 315 56 0 chr20 28740393 28740555 -43413327 + MLT1L LTR MaLR 435 605 -10 192 321 107 27 chr20 28742427 28742539 -43411343 + L2 LINE L2 2600 2720 -594 2172 110 24 3 chr20 28742614 28742905 -43410977 - AluSx SINE Alu -15 297 1 2449 98 0 0 chr20 28742959 28743266 -43410616 - AluSc SINE Alu -1 308 2 245 373 95 8 chr20 28743531 28743644 -43410238 + L2 LINE L2 3122 3245 -27 283 364 18 9 chr20 28743644 28743754 -43410128 + MER5B DNA MER1_type 1 111 -67 264 59 0 0 chr20 28743755 28743789 -43410093 + (CA)n Simple_repeat Simple_repeat 1 34 0 217 341 37 0 chr20 28744247 28744329 -43409553 + L2 LINE L2 3149 3233 -39 2333 217 34 14 chr20 28745092 28745655 -43408227 + L1MD1 LINE L1 5669 6242 0 1026 236 14 0 chr20 28746075 28746295 -43407587 - MER58A DNA MER1_type 0 224 2 2435 93 3 3 chr20 28746937 28747273 -43406609 + AluSp SINE Alu 1 336 0 307 256 12 0 chr20 28747672 28747754 -43406128 - L1ME3A LINE L1 -60 6110 6028 418 234 156 18 chr20 28747833 28748000 -43405882 - L1ME3A LINE L1 -251 5913 5724 186 227 68 0 chr20 28748360 28748404 -43405478 - L2 LINE L2 -77 3195 3149 312 319 111 15 chr20 28749425 28749564 -43404318 - MIR SINE MIR -76 186 35 1057 246 109 43 chr20 28749859 28750254 -43403628 + MER63B DNA MER1_type 14 434 -2 387 331 26 13 chr20 28752228 28752379 -43401503 - MIR3 SINE MIR -9 199 47 203 103 26 0 chr20 28752379 28752418 -43401464 + (TG)n Simple_repeat Simple_repeat 1 40 0 313 373 83 18 chr20 28752476 28752752 -43401130 + L1ME4a LINE L1 5642 5935 -186 232 282 42 0 chr20 28754087 28754158 -43399724 + MER5A DNA MER1_type 1 74 -115 2212 139 0 0 chr20 28754159 28754469 -43399413 + AluSx SINE Alu 1 310 -2 483 63 0 0 chr20 28754473 28754536 -43399346 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 1411 228 94 21 chr20 28754548 28754983 -43398899 - MLT1C LTR MaLR 0 467 1 283 276 86 0 chr20 28755232 28755348 -43398534 - LTR16C LTR ERVL 0 491 366 1274 232 40 16 chr20 28756084 28756454 -43397428 - MLT1B LTR MaLR -4 386 8 189 305 93 17 chr20 28756462 28756580 -43397302 - MIR SINE MIR -57 205 79 282 367 20 20 chr20 28756940 28757090 -43396792 + L2 LINE L2 2865 3014 -299 209 333 29 0 chr20 28757167 28757236 -43396646 + L2 LINE L2 3201 3271 -42 226 323 94 31 chr20 28758043 28758170 -43395712 - MIR3 SINE MIR -65 143 9 2080 143 10 0 chr20 28758920 28759228 -43394654 - AluSx SINE Alu -1 311 1 334 299 90 30 chr20 28759964 28760098 -43393784 - MIR SINE MIR -65 143 19 316 333 10 0 chr20 28760411 28760513 -43393369 + MIR SINE MIR 6 108 -154 267 289 62 41 chr20 28760609 28760803 -43393079 - LTR16C LTR ERVL -39 452 255 328 271 24 0 chr20 28761023 28761108 -43392774 + MIR3 SINE MIR 83 169 -39 602 289 55 18 chr20 28762856 28763162 -43390720 - MLT1G1 LTR MaLR -283 272 2 305 300 0 0 chr20 28763350 28763430 -43390452 - MIR SINE MIR -106 156 77 207 278 67 33 chr20 28764919 28765009 -43388873 + L2 LINE L2 3178 3270 -2 202 307 120 0 chr20 28766294 28766369 -43387513 + MER5C DNA MER1_type 111 194 -130 228 291 13 0 chr20 28767414 28767493 -43386389 - MIR SINE MIR -64 144 65 728 231 94 0 chr20 28768250 28768462 -43385420 + L1ME1 LINE L1 5799 6030 -136 1704 162 62 14 chr20 28768532 28768981 -43384901 + LTR64 LTR ERVK 1 535 -23 286 293 12 0 chr20 28769213 28769295 -43384587 - MER58A DNA MER1_type -19 88 6 502 243 0 59 chr20 28770388 28770524 -43383358 - MER3 DNA MER1_type -81 128 1 306 274 21 0 chr20 28770631 28770726 -43383156 - MER20 DNA MER1_type 0 219 123 464 256 163 6 chr20 28772330 28772502 -43381380 - MIR SINE MIR -55 207 9 1749 189 3 3 chr20 28775275 28775587 -43378295 + AluJo SINE Alu 1 312 0 431 305 13 20 chr20 28776527 28776678 -43377204 + MIR SINE MIR 111 260 -2 4421 199 23 34 chr20 28777872 28778011 -43375871 + L1MB2 LINE L1 4335 4474 -1697 2348 50 43 3 chr20 28778011 28778293 -43375589 + AluY SINE Alu 1 293 -18 4421 199 23 34 chr20 28778293 28780006 -43373876 + L1MB2 LINE L1 4474 6167 -4 294 339 27 0 chr20 28780463 28780575 -43373307 - MIR SINE MIR -112 150 36 285 251 132 65 chr20 28780575 28780780 -43373102 - MLT1B LTR MaLR 0 555 331 1675 214 12 3 chr20 28781827 28782173 -43371709 + MER65C LTR ERV1 1 349 -112 371 260 24 47 chr20 28782140 28782267 -43371615 + LTR51 LTR ERV1 548 671 0 * 511 289 115 46 chr20 28783762 28783847 -43370035 - L1MC/D LINE L1 -803 5343 5265 1813 14 0 0 chr20 28783847 28784096 -43369786 + L1PA2 LINE L1 5934 6182 0 511 289 115 46 chr20 28784096 28784438 -43369444 - L1MC/D LINE L1 -881 5265 5006 602 274 149 4 chr20 28786003 28786258 -43367624 - L2 LINE L2 -3 3310 3019 322 258 79 0 chr20 28786964 28787053 -43366829 + HAL1b LINE L1 1249 1344 -4 265 303 0 0 chr20 28787658 28787724 -43366158 + GA-rich Low_complexity Low_complexity 3 68 0 476 236 6 0 chr20 28787749 28787906 -43365976 + (TG)n Simple_repeat Simple_repeat 1 158 0 188 309 48 24 chr20 28789981 28790065 -43363817 + L2 LINE L2 3185 3270 -2 210 356 11 11 chr20 28790834 28790921 -43362961 - MER5A DNA MER1_type -38 151 65 265 309 90 56 chr20 28791455 28791743 -43362139 + L1ME4a LINE L1 5813 6110 -11 342 297 36 14 chr20 28792410 28792548 -43361334 - L3 LINE CR1 -75 1502 1362 404 255 10 0 chr20 28792579 28792677 -43361205 - MER5A DNA MER1_type -87 102 4 330 26 0 0 chr20 28792778 28792817 -43361065 + (CA)n Simple_repeat Simple_repeat 2 40 0 237 275 50 0 chr20 28792820 28792900 -43360982 - L3 LINE CR1 -241 1336 1253 428 274 164 42 chr20 28795613 28795923 -43357959 - MLT1H1 LTR MaLR -8 547 200 1845 189 44 6 chr20 28797818 28798184 -43355698 - MLT1B LTR MaLR -10 380 1 608 215 16 0 chr20 28798584 28798705 -43355177 + FRAM SINE Alu 1 122 -54 1274 33 0 33 chr20 28798710 28798728 -43355154 + (GAAA)n Simple_repeat Simple_repeat 1 195 0 1274 33 0 33 chr20 28798728 28798912 -43354970 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 1031 272 24 20 chr20 28799150 28799448 -43354434 + LTR10D LTR ERV1 157 455 -58 791 131 17 26 chr20 28799455 28799686 -43354196 + GA-rich Low_complexity Low_complexity 1 229 0 1100 86 23 0 chr20 28799689 28799866 -43354016 + (GAAA)n Simple_repeat Simple_repeat 1 181 0 2294 65 3 7 chr20 28801454 28801761 -43352121 - AluY SINE Alu -5 306 1 298 330 36 18 chr20 28802105 28802217 -43351665 + L2 LINE L2 3197 3310 -3 * 332 244 84 38 chr20 28802201 28802332 -43351550 + MIR SINE MIR 72 208 -54 183 217 0 83 chr20 28803928 28803988 -43349894 - L2 LINE L2 -1278 2036 1982 689 147 37 0 chr20 28804776 28804885 -43348997 - 5S rRNA rRNA -1 120 8 209 260 104 52 chr20 28805728 28805805 -43348077 + L2 LINE L2 3192 3272 0 250 312 75 58 chr20 28806243 28806416 -43347466 + L2 LINE L2 3117 3292 -21 454 319 55 12 chr20 28807784 28807947 -43345935 - MER5B DNA MER1_type -8 170 1 1903 107 4 15 chr20 28808813 28809085 -43344797 - AluSq SINE Alu -44 269 1 268 276 130 52 chr20 28810473 28810803 -43343079 - LTR16C LTR ERVL -135 356 1 2006 117 3 0 chr20 28810956 28811271 -43342611 + AluSx SINE Alu 1 316 0 804 257 92 9 chr20 28811443 28811764 -43342118 - L1ME1 LINE L1 -206 5958 5589 5449 49 0 3 chr20 28811940 28812599 -43341283 - L1PA5 LINE L1 -6 6148 5492 341 283 101 7 chr20 28813281 28813419 -43340463 - L1ME LINE L1 -334 5787 5637 320 366 33 13 chr20 28813443 28813596 -43340286 - MIR SINE MIR -63 199 44 1045 139 31 10 chr20 28814930 28815124 -43338758 + HSMAR2 DNA Mariner 5 202 -1100 9184 178 15 5 chr20 28815124 28816134 -43337748 - L1PB1 LINE L1 -8 6143 5144 1502 110 0 22 chr20 28816134 28816382 -43337500 - AluY SINE Alu 0 311 80 9184 178 15 5 chr20 28816382 28818292 -43335590 - L1PB1 LINE L1 -1007 5144 3191 553 224 27 14 chr20 28818420 28818567 -43335315 - MER51-int LTR ERV1 -2432 2583 2435 852 165 34 0 chr20 28818569 28818745 -43335137 - MER51-int LTR ERV1 -3693 4123 3942 * 3434 160 43 5 chr20 28818737 28819324 -43334558 - MER51-int LTR ERV1 -1936 6983 6375 1152 136 6 11 chr20 28819375 28819551 -43334331 - LTR9 LTR ERV1 0 612 438 6565 144 27 2 chr20 28819557 28820617 -43333265 + HSMAR2 DNA Mariner 214 1300 -2 1686 157 58 68 chr20 28820709 28821103 -43332779 - MLT1B LTR MaLR 0 390 1 1408 221 32 2 chr20 28821103 28821505 -43332377 + L1M4 LINE L1 4169 4582 -1564 728 297 51 20 chr20 28822364 28822657 -43331225 + LTR16A LTR ERVL 89 390 -60 192 356 93 8 chr20 28823287 28823405 -43330477 + MIR SINE MIR 4 131 -131 232 289 57 88 chr20 28823748 28823907 -43329975 + L2 LINE L2 2897 3050 -222 8535 63 8 0 chr20 28825188 28827062 -43326820 - L1PA6 LINE L1 0 6154 4273 18975 124 11 13 chr20 28827062 28829963 -43323919 - L1PA6 LINE L1 -3242 2904 11 243 0 0 0 chr20 28830059 28830086 -43323796 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 217 298 210 0 chr20 28830186 28830310 -43323572 - MIR SINE MIR -93 169 20 1319 248 2 60 chr20 28830903 28831302 -43322580 - MLT1B LTR MaLR -7 383 8 228 204 41 92 chr20 28831479 28831577 -43322305 - LTR16C LTR ERVL -13 478 386 353 235 5 43 chr20 28832133 28832320 -43321562 + (TG)n Simple_repeat Simple_repeat 1 180 0 364 141 22 49 chr20 28832332 28832517 -43321365 + (TG)n Simple_repeat Simple_repeat 1 180 0 468 153 31 25 chr20 28832551 28833085 -43320797 + (TG)n Simple_repeat Simple_repeat 1 537 0 860 281 102 19 chr20 28834670 28835044 -43318838 + MLT1I LTR MaLR 5 409 0 369 131 0 0 chr20 28835108 28835169 -43318713 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 1215 255 89 25 chr20 28836054 28836458 -43317424 + MER74B LTR ERVL 136 565 -57 6672 176 7 2 chr20 28836467 28838667 -43315215 + L1PB1 LINE L1 3937 6143 -8 1481 178 70 7 chr20 28838669 28838939 -43314943 - AluSx SINE Alu -23 289 3 680 253 51 54 chr20 28838939 28839173 -43314709 - L1M4 LINE L1 -2299 3847 3613 3198 132 78 5 chr20 28839173 28839735 -43314147 + LTR26 LTR ERV1 1 603 0 680 253 51 54 chr20 28839735 28839816 -43314066 - L1M4 LINE L1 -2533 3613 3533 1000 240 30 11 chr20 28841331 28841731 -43312151 + Charlie4a DNA MER1_type 49 493 -15 326 143 143 14 chr20 28843216 28843286 -43310596 + MLT1G1 LTR MaLR 103 181 -414 1089 241 82 11 chr20 28843286 28843651 -43310231 + L1M4 LINE L1 3626 4016 -2130 * 1986 223 85 55 chr20 28843649 28843894 -43309988 - L1MDa LINE L1 -5924 616 380 3320 182 16 3 chr20 28843894 28844510 -43309372 - L1PB4 LINE L1 -1 6155 5532 1986 223 85 55 chr20 28844510 28844842 -43309040 - L1MDa LINE L1 -6160 380 22 322 299 96 78 chr20 28844840 28845359 -43308523 - HAL1 LINE L1 -850 1657 1116 * 1238 219 131 27 chr20 28845359 28845505 -43308377 + MLT1A1 LTR MaLR 1 130 -235 2050 104 0 7 chr20 28845505 28845820 -43308062 + AluSc SINE Alu 1 313 0 1238 219 131 27 chr20 28845820 28845999 -43307883 + MLT1A1 LTR MaLR 130 362 -3 322 299 96 78 chr20 28845999 28846325 -43307557 - HAL1 LINE L1 -1391 1116 797 939 253 67 14 chr20 28846328 28846784 -43307098 + LTR33 LTR ERVL 1 513 -8 2130 173 10 30 chr20 28846875 28847273 -43306609 - MLT1B LTR MaLR 0 390 1 2198 124 50 19 chr20 28847867 28848231 -43305651 - THE1C LTR MaLR 0 375 1 315 366 98 0 chr20 28848246 28848369 -43305513 - HAL1 LINE L1 -2370 137 3 1109 188 74 220 chr20 28848716 28848987 -43304895 - L1MC3 LINE L1 -2 7993 7684 913 185 0 0 chr20 28848987 28849144 -43304738 - FRAM SINE Alu -19 157 1 1109 188 74 220 chr20 28849144 28849502 -43304380 - L1MC3 LINE L1 -311 7684 7323 2480 53 0 0 chr20 28851219 28851520 -43302362 - AluY SINE Alu -10 301 1 228 279 8 33 chr20 28851693 28851754 -43302128 + (TG)n Simple_repeat Simple_repeat 1 59 -60 966 147 32 37 chr20 28851754 28851944 -43301938 + MER53 DNA DNA 1 189 0 228 279 8 33 chr20 28851944 28852004 -43301878 + (TG)n Simple_repeat Simple_repeat 59 119 0 1074 193 218 0 chr20 28852400 28852639 -43301243 + AluJo SINE Alu 1 291 -21 44565 44 4 0 chr20 28853057 28859185 -43294697 - L1PA4 LINE L1 -2 6153 2 235 269 167 0 chr20 28860255 28860333 -43293549 + MLT1L LTR MaLR 190 280 -335 384 314 124 31 chr20 28861194 28861582 -43292300 - MLT1L LTR MaLR -2 613 190 459 277 110 0 chr20 28862902 28863057 -43290825 + MER5A DNA MER1_type 18 189 0 306 0 0 0 chr20 28863134 28863168 -43290714 + (TG)n Simple_repeat Simple_repeat 2 35 0 217 314 0 47 chr20 28863452 28863538 -43290344 - L2 LINE L2 -1 3271 3190 213 207 37 85 chr20 28865534 28865584 -43288298 + MIR SINE MIR 113 159 -103 1491 244 25 8 chr20 28865584 28865941 -43287941 - MLT1A1 LTR MaLR 0 365 3 213 207 37 85 chr20 28865941 28865972 -43287910 + MIR SINE MIR 159 190 -72 468 318 27 50 chr20 28866730 28866950 -43286932 + LTR16C LTR ERVL 127 341 -150 319 241 46 19 chr20 28866992 28867100 -43286782 + LTR16C LTR ERVL 350 460 -31 1953 221 106 8 chr20 28867621 28868133 -43285749 - REP3 LTR ERV 0 562 1 180 309 24 0 chr20 28868207 28868249 -43285633 - L2 LINE L2 -24 3289 3247 1469 220 51 61 chr20 28868260 28868655 -43285227 - MLT2B1 LTR ERVL 0 520 130 207 0 0 0 chr20 28868693 28868716 -43285166 + (CAAT)n Simple_repeat Simple_repeat 1 23 0 607 304 103 22 chr20 28870525 28870857 -43283025 + L1MC4a LINE L1 4760 5139 -1007 1048 167 12 69 chr20 28870857 28871103 -43282779 - MER46A DNA MER2_type 0 236 5 607 304 103 22 chr20 28871103 28871218 -43282664 + L1MC4a LINE L1 5139 5243 -903 442 226 60 128 chr20 28871273 28871539 -43282343 - MIR SINE MIR 0 262 15 331 322 0 0 chr20 28871542 28871657 -43282225 + (TCCA)n Simple_repeat Simple_repeat 4 118 0 1972 167 11 59 chr20 28871657 28871939 -43281943 + LTR53 LTR ERVL 1 262 -257 1728 139 26 20 chr20 28871939 28872108 -43281774 - AluJb SINE Alu -8 304 131 228 35 0 0 chr20 28872108 28872137 -43281745 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1728 139 26 20 chr20 28872137 28872269 -43281613 - AluJb SINE Alu -181 131 1 1972 167 11 59 chr20 28872269 28872357 -43281525 + LTR53 LTR ERVL 262 353 -166 1493 183 3 10 chr20 28872552 28872842 -43281040 + AluJb SINE Alu 1 288 -24 233 194 45 30 chr20 28873519 28873586 -43280296 + MER5B DNA MER1_type 106 173 -5 338 267 113 68 chr20 28874112 28874313 -43279569 + L1MC4a LINE L1 5633 5859 -270 251 223 21 64 chr20 28874485 28874579 -43279303 + L1MC4 LINE L1 6614 6703 -1339 365 260 13 7 chr20 28874594 28874745 -43279137 + L1MC4 LINE L1 2006 6983 -1339 341 263 0 53 chr20 28874735 28874830 -43279052 + L1MC4 LINE L1 6894 6983 -1339 * 1734 163 0 0 chr20 28876179 28876467 -43277415 + AluSx SINE Alu 24 311 -1 388 275 45 110 chr20 28877540 28877740 -43276142 + MER102b DNA MER1_type 155 341 0 832 150 0 0 chr20 28879289 28879416 -43274466 + AluSq/x SINE Alu 1 127 -185 1998 110 41 0 chr20 28879454 28879744 -43274138 + AluSq SINE Alu 1 302 -11 281 342 135 31 chr20 28879746 28879968 -43273914 - L2 LINE L2 -351 2963 2719 2245 112 0 0 chr20 28879983 28880287 -43273595 - AluSq SINE Alu -9 304 1 2707 205 2 4 chr20 28880639 28881126 -43272756 - MER66B LTR ERV1 0 486 1 217 308 45 96 chr20 28881543 28881741 -43272141 - MIR SINE MIR -73 189 2 1166 284 108 55 chr20 28882067 28882791 -43271091 - L1ME LINE L1 -5178 892 131 343 307 34 45 chr20 28882820 28882996 -43270886 - MIR SINE MIR -70 192 19 824 270 32 48 chr20 28883742 28883990 -43269892 + MIR SINE MIR 19 262 0 450 276 0 0 chr20 28884031 28884194 -43269688 + (CTA)n Simple_repeat Simple_repeat 3 165 0 655 152 38 148 chr20 28884292 28884502 -43269380 + MER53 DNA DNA 3 189 0 219 36 0 0 chr20 28884558 28884586 -43269296 + (CA)n Simple_repeat Simple_repeat 2 29 0 4272 131 16 0 chr20 28885892 28886517 -43267365 + MER41B LTR ERV1 1 635 0 2330 158 77 2 chr20 28888259 28888688 -43265194 - MER65C LTR ERV1 0 461 1 2951 159 22 26 chr20 28888994 28889390 -43264492 + LTR26B LTR ERV1 1 396 -135 2557 106 30 52 chr20 28889390 28889797 -43264085 - MER48 LTR ERV1 0 398 1 2951 159 22 26 chr20 28889797 28889933 -43263949 + LTR26B LTR ERV1 396 531 0 * 2964 179 72 13 chr20 28889933 28890540 -43263342 - LTR51 LTR ERV1 -28 643 1 312 298 97 9 chr20 28890597 28890711 -43263171 - L1ME4a LINE L1 0 6121 5998 738 220 145 20 chr20 28890748 28890964 -43262918 - L1MC4 LINE L1 -6 8036 7848 2918 85 31 3 chr20 28890964 28891351 -43262531 - MER48 LTR ERV1 0 398 1 738 220 145 20 chr20 28891351 28891438 -43262444 - L1MC4 LINE L1 -194 7848 7602 922 273 11 8 chr20 28891473 28891740 -43262142 - L1MC4 LINE L1 -467 7575 7308 547 258 56 11 chr20 28892060 28892238 -43261644 - MER5A DNA MER1_type 0 189 4 204 273 78 116 chr20 28892840 28893082 -43260800 + L2 LINE L2 3040 3272 0 343 267 35 0 chr20 28893512 28893598 -43260284 + MER92A LTR ERV1 1 89 -323 1573 249 83 26 chr20 28894683 28895174 -43258708 + LTR40a LTR ERVL 1 519 0 221 286 14 0 chr20 28895647 28895717 -43258165 + MIR SINE MIR 192 262 0 * 254 310 120 0 chr20 28895676 28895818 -43258064 - MIR SINE MIR -18 244 86 409 309 115 13 chr20 28895821 28896123 -43257759 - MLT1L LTR MaLR -7 608 187 621 276 43 5 chr20 28896301 28896486 -43257396 + MER3 DNA MER1_type 18 209 0 1115 194 70 0 chr20 28896568 28896841 -43257041 - MER33 DNA MER1_type -13 311 20 518 225 73 17 chr20 28896943 28897121 -43256761 - MER5A DNA MER1_type 0 189 2 518 301 39 7 chr20 28898573 28898726 -43255156 + MER5B DNA MER1_type 21 178 0 27 29 0 0 chr20 28900759 28900793 -43253089 + GC_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr20 28901055 28901086 -43252796 + GC_rich Low_complexity Low_complexity 1 31 0 241 192 39 0 chr20 28904075 28904127 -43249755 + MIR SINE MIR 89 142 -120 292 346 63 79 chr20 28905349 28905664 -43248218 - L2 LINE L2 -84 3229 2920 249 236 0 45 chr20 28906561 28906650 -43247232 - L1ME3 LINE L1 -1 6161 6080 186 344 264 0 chr20 28908937 28909100 -43244782 - MIR SINE MIR -10 252 47 444 325 94 63 chr20 28909352 28909810 -43244072 + L2 LINE L2 2838 3309 -4 252 0 0 0 chr20 28909903 28909931 -43243951 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 294 274 191 45 chr20 28911855 28912012 -43241870 - MER5A DNA MER1_type -2 187 8 21 0 0 0 chr20 28912872 28912893 -43240989 + AT_rich Low_complexity Low_complexity 1 21 0 442 221 71 0 chr20 28917159 28917272 -43236610 - MER45A DNA AcHobo 0 178 58 731 251 47 38 chr20 28919280 28919515 -43234367 + MIR SINE MIR 18 254 -8 187 359 31 0 chr20 28919561 28919625 -43234257 + L2 LINE L2 3199 3264 -8 423 315 15 0 chr20 28919728 28919858 -43234024 - MIR SINE MIR -75 187 56 214 294 160 8 chr20 28919900 28920019 -43233863 + MIR SINE MIR 52 188 -74 1607 184 7 34 chr20 28920252 28920546 -43233336 - AluJb SINE Alu -26 286 1 4957 192 55 34 chr20 28921019 28922685 -43231197 + L1MB8 LINE L1 4004 5725 -453 2296 116 0 10 chr20 28922685 28922987 -43230895 - AluSc SINE Alu -10 299 1 4957 192 55 34 chr20 28922987 28923445 -43230437 + L1MB8 LINE L1 5725 6172 -6 1478 218 26 47 chr20 28923939 28924407 -43229475 - Charlie4a DNA MER1_type -18 490 33 3758 149 64 5 chr20 28925105 28925776 -43228106 + MER50 LTR ERV1 1 711 -23 437 206 33 0 chr20 28926339 28926431 -43227451 - MER58B DNA MER1_type -19 322 228 243 242 32 0 chr20 28926453 28926515 -43227367 - MLT1F LTR MaLR -3 539 476 482 153 31 0 chr20 28927882 28927980 -43225902 + MER5A DNA MER1_type 9 109 -80 767 193 29 0 chr20 28928197 28928337 -43225545 + MER5A DNA MER1_type 43 186 -3 1175 190 36 12 chr20 28928789 28929036 -43224846 - MER58B DNA MER1_type -88 253 1 952 168 199 78 chr20 28929843 28930165 -43223717 - MLT1D LTR MaLR 0 505 145 22 0 0 0 chr20 28930390 28930412 -43223470 + AT_rich Low_complexity Low_complexity 1 22 0 468 327 128 5 chr20 28931843 28932054 -43221828 - MIR SINE MIR -12 250 14 1258 258 41 21 chr20 28932220 28932655 -43221227 + L1ME2 LINE L1 5711 6154 -10 433 275 7 35 chr20 28933200 28933342 -43220540 + MIR SINE MIR 19 156 -106 1250 194 52 49 chr20 28933709 28934033 -43219849 + MER76 LTR ERV 364 688 0 380 222 0 0 chr20 28934072 28934162 -43219720 + L1M4 LINE L1 5152 5241 -905 1101 110 30 0 chr20 28934170 28934334 -43219548 - Tigger3(Golem) DNA MER2_type -20 3009 2841 426 105 0 0 chr20 28984336 28984393 -43169489 - Alu SINE Alu -252 58 2 391 235 39 33 chr20 28984447 28984600 -43169282 - HAL1 LINE L1 -105 2402 2249 30 45 0 0 chr20 28984743 28984787 -43169095 + AT_rich Low_complexity Low_complexity 1 44 0 865 315 164 33 chr20 28985128 28985356 -43168526 - L1 LINE L1 -2145 4001 3804 1830 183 3 0 chr20 28985356 28985667 -43168215 - AluJb SINE Alu 0 312 1 865 315 164 33 chr20 28985667 28986384 -43167498 - L1 LINE L1 -2342 3804 2932 731 142 8 24 chr20 28986567 28986694 -43167188 - FLAM_C SINE Alu -7 126 2 1907 114 23 0 chr20 28986706 28986968 -43166914 - AluSx SINE Alu -18 294 27 424 341 103 13 chr20 28986970 28987348 -43166534 - L1 LINE L1 -3435 2711 2300 232 213 0 0 chr20 28987413 28987460 -43166422 + MLT1I LTR MaLR 93 139 -270 313 301 23 40 chr20 28987674 28987847 -43166035 - L1 LINE L1 -3840 2306 2137 424 301 61 27 chr20 28988253 28988549 -43165333 - HAL1b LINE L1 -824 524 219 1782 121 39 0 chr20 28989008 28989290 -43164592 - L1PA16 LINE L1 -5 6161 5869 882 170 6 0 chr20 28990801 28990972 -43162910 - L1MA6 LINE L1 -5 6295 6124 181 200 50 0 chr20 28992056 28992096 -43161786 + L2 LINE L2 3227 3268 -4 332 339 85 26 chr20 28992623 28992812 -43161070 + MIR SINE MIR 43 242 -20 1012 201 98 126 chr20 28993244 28993442 -43160440 - L1MB8 LINE L1 -10 6168 5966 1207 182 97 57 chr20 28993442 28993793 -43160089 - MLT1A1 LTR MaLR 0 365 1 1012 201 98 126 chr20 28993793 28993972 -43159910 - L1MB8 LINE L1 -212 5966 5784 2054 112 7 7 chr20 28993972 28994268 -43159614 - AluSx SINE Alu -16 296 1 1012 201 98 126 chr20 28994268 28994411 -43159471 - L1MB8 LINE L1 -394 5784 5639 1524 120 127 40 chr20 28994411 28994687 -43159195 - AluSx SINE Alu -12 300 1 1012 201 98 126 chr20 28994687 28994937 -43158945 - L1MB8 LINE L1 -539 5639 5417 475 327 42 14 chr20 28995017 28995253 -43158629 - MIR SINE MIR -1 261 23 310 309 56 60 chr20 28995563 28995796 -43158086 + L3 LINE CR1 1331 1562 -15 2309 102 0 0 chr20 28996092 28996387 -43157495 - AluSq SINE Alu -18 295 1 492 259 168 22 chr20 28996387 28996572 -43157310 + MIR SINE MIR 48 259 -3 1940 128 3 3 chr20 28997776 28998109 -43155773 - AluSx SINE Alu 0 333 1 217 300 158 33 chr20 28998225 28998297 -43155585 + L2 LINE L2 2594 2656 -658 897 53 76 38 chr20 28998297 28998429 -43155453 + MER85 DNA T2_type 2 138 -1 217 300 158 33 chr20 28998429 28998476 -43155406 + L2 LINE L2 2656 2728 -586 872 271 65 60 chr20 28998521 28998935 -43154947 + L2 LINE L2 2898 3313 0 1931 114 18 0 chr20 28999195 28999467 -43154415 - AluSg SINE Alu -33 277 1 1590 221 19 11 chr20 29000127 29000489 -43153393 - MLT1A1 LTR MaLR 0 365 1 211 211 19 39 chr20 29000557 29000609 -43153273 - MIR SINE MIR -189 73 23 1481 102 46 141 chr20 29000736 29000853 -43153029 + AluJo SINE Alu 23 150 -162 2120 115 0 14 chr20 29000853 29001149 -43152733 - AluSx SINE Alu -20 292 1 1481 102 46 141 chr20 29001149 29001336 -43152546 + AluJo SINE Alu 150 298 -14 529 292 102 9 chr20 29001802 29002018 -43151864 - MER46C DNA MER2_type -83 255 20 321 276 149 29 chr20 29003524 29003698 -43150184 + L1ME4a LINE L1 5869 6063 -58 1013 254 116 90 chr20 29005127 29006210 -43147672 + L2 LINE L2 2187 3313 0 812 116 7 43 chr20 29006885 29007023 -43146859 + FLAM_C SINE Alu 1 133 0 1440 193 4 14 chr20 29007048 29007323 -43146559 - AluJo SINE Alu -40 272 1 468 300 13 33 chr20 29007492 29007642 -43146240 + L2 LINE L2 3121 3267 -5 1259 208 78 11 chr20 29007868 29008152 -43145730 + MER58B DNA MER1_type 39 341 0 1945 97 22 7 chr20 29008370 29008675 -43145207 - AluSq SINE Alu 0 309 1 519 312 36 53 chr20 29008934 29009271 -43144611 - MLT1J1 LTR MaLR -101 345 15 3882 192 58 14 chr20 29009835 29011375 -43142507 - L1MB7 LINE L1 -16 6168 4563 2033 212 98 13 chr20 29011380 29011422 -43142460 - MLT2B1 LTR ERVL -8 512 475 288 91 0 0 chr20 29011422 29011466 -43142416 + (TG)n Simple_repeat Simple_repeat 2 45 0 2033 212 98 13 chr20 29011466 29011895 -43141987 - MLT2B1 LTR ERVL -45 475 1 2936 210 19 23 chr20 29011895 29012591 -43141291 - L1MB7 LINE L1 -1581 4565 3873 256 75 50 0 chr20 29012600 29012640 -43141242 - L1MDa LINE L1 -2228 4312 4271 * 720 166 20 7 chr20 29012625 29012776 -43141106 - L1MDa LINE L1 -2203 4337 4185 1468 247 20 14 chr20 29012788 29013132 -43140750 - MER77 LTR ERV1 -6 599 254 985 198 44 0 chr20 29013132 29013359 -43140523 - L1MDa LINE L1 -2367 4173 3937 976 215 119 31 chr20 29013363 29013917 -43139965 - L1MDa LINE L1 -2963 3577 2975 369 62 0 0 chr20 29013918 29013966 -43139916 + (TC)n Simple_repeat Simple_repeat 1 48 0 975 157 0 6 chr20 29013966 29014132 -43139750 - AluSx SINE Alu 0 312 148 657 163 0 0 chr20 29014132 29014230 -43139652 - AluSx SINE Alu -214 99 2 1446 190 79 20 chr20 29014233 29014565 -43139317 - L1MDa LINE L1 -3553 2987 2605 2003 137 3 0 chr20 29014565 29014871 -43139011 - AluSx SINE Alu -5 307 1 1446 190 79 20 chr20 29014871 29015057 -43138825 - L1MDa LINE L1 -3935 2605 2431 1360 154 36 24 chr20 29015057 29015304 -43138578 - AluJb SINE Alu 0 312 63 813 163 0 0 chr20 29015305 29015428 -43138454 - AluJb SINE Alu -188 124 2 6811 201 143 60 chr20 29015432 29015456 -43138426 - L1MDa LINE L1 -4135 2405 2384 1248 219 4 8 chr20 29015456 29015693 -43138189 + MER8 DNA MER2_type 1 236 -3 6811 201 143 60 chr20 29015693 29016185 -43137697 - L1MDa LINE L1 -4156 2384 1934 548 131 0 24 chr20 29016185 29016269 -43137613 - AluS SINE Alu -225 87 6 6811 201 143 60 chr20 29016269 29016529 -43137353 - L1MDa LINE L1 -4606 1934 1697 2168 106 0 0 chr20 29016529 29016831 -43137051 - AluSc SINE Alu -7 302 1 6811 201 143 60 chr20 29016831 29018191 -43135691 - L1MDa LINE L1 -4843 1697 1 728 153 34 17 chr20 29018691 29018809 -43135073 + 5S rRNA rRNA 1 120 -1 2081 118 0 7 chr20 29018879 29019183 -43134699 + AluSx SINE Alu 1 302 -10 2241 93 3 0 chr20 29020588 29020888 -43132994 + AluSc SINE Alu 1 301 -8 25 0 0 0 chr20 29020888 29020913 -43132969 + AT_rich Low_complexity Low_complexity 1 25 0 2132 105 0 0 chr20 29020962 29021279 -43132603 + AluSq SINE Alu 1 317 0 1551 171 0 42 chr20 29021364 29021673 -43132209 - AluJb SINE Alu -16 296 1 3206 135 38 0 chr20 29026050 29026525 -43127357 + MER1A DNA MER1_type 37 529 0 323 346 99 9 chr20 29032041 29032373 -43121509 - L1ME4a LINE L1 -176 5945 5584 288 154 0 0 chr20 29034376 29034428 -43119454 + CT-rich Low_complexity Low_complexity 1 52 0 224 200 117 0 chr20 29035941 29036001 -43117881 + MIR SINE MIR 74 140 -122 198 200 0 0 chr20 29036077 29036112 -43117770 - MIR SINE MIR -102 160 126 22 35 0 0 chr20 29037591 29037620 -43116262 + GC_rich Low_complexity Low_complexity 1 29 0 659 234 208 4 chr20 29038241 29038510 -43115372 + MER110A LTR ERV1 144 467 -1 3106 169 86 14 chr20 29038539 29039201 -43114681 + MER67C LTR ERV1 1 710 0 278 95 0 0 chr20 29039216 29039258 -43114624 + L2 LINE L2 3272 3313 0 1923 107 3 31 chr20 29039396 29039531 -43114351 + AluSx SINE Alu 1 138 -174 2033 129 0 0 chr20 29039531 29039825 -43114057 + AluSx SINE Alu 1 294 -18 1923 107 3 31 chr20 29039825 29039979 -43113903 + AluSx SINE Alu 138 282 -30 3381 175 41 37 chr20 29040065 29040795 -43113087 + MER49 LTR ERV1 184 916 -7 469 223 112 28 chr20 29040966 29041181 -43112701 + L1ME4a LINE L1 5683 5915 -206 185 0 40 0 chr20 29042137 29042162 -43111720 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1515 81 0 0 chr20 29042162 29042360 -43111522 - AluSg/x SINE Alu -33 277 80 545 282 144 40 chr20 29043519 29043867 -43110015 - MLT1J LTR MaLR -4 507 124 187 186 23 23 chr20 29044427 29044470 -43109412 + MER5B DNA MER1_type 34 76 -102 888 128 0 8 chr20 29044483 29044616 -43109266 + AluSg/x SINE Alu 128 259 -53 441 0 0 0 chr20 29044643 29044692 -43109190 + (CA)n Simple_repeat Simple_repeat 1 49 0 271 250 66 13 chr20 29044705 29044781 -43109101 - MER5B DNA MER1_type -96 82 3 2044 110 7 0 chr20 29046073 29046363 -43107519 - AluSx SINE Alu -20 292 1 315 223 0 87 chr20 29046366 29046469 -43107413 - MER2 DNA MER2_type -251 94 1 333 302 22 36 chr20 29047391 29047407 -43106475 - MIR SINE MIR -27 235 220 1793 142 30 26 chr20 29047407 29047746 -43106136 + MER2 DNA MER2_type 1 340 -4 333 302 22 36 chr20 29047746 29047868 -43106014 - MIR SINE MIR -42 220 99 248 270 80 58 chr20 29050246 29050383 -43103499 - MIR SINE MIR -13 249 110 308 269 0 0 chr20 29050569 29050636 -43103246 + L2 LINE L2 3242 3308 -5 1463 201 26 27 chr20 29050749 29051188 -43102694 - LTR2B LTR ERV1 0 490 1 295 295 215 16 chr20 29051285 29051536 -43102346 + MLT1K LTR MaLR 225 525 -63 504 345 11 0 chr20 29051605 29051782 -43102100 + MIR SINE MIR 76 254 -8 223 202 3 0 chr20 29052387 29052433 -43101449 + MIR SINE MIR 108 155 -53 344 326 0 0 chr20 29053075 29053167 -43100715 + (CA)n Simple_repeat Simple_repeat 2 93 0 332 349 80 11 chr20 29053200 29053464 -43100418 + MLT1G1 LTR MaLR 1 282 -313 655 202 8 0 chr20 29053549 29053668 -43100214 + MLT1G1 LTR MaLR 461 580 -15 2090 105 17 3 chr20 29053829 29054125 -43099757 + AluSg SINE Alu 1 300 -10 677 237 163 41 chr20 29054770 29055040 -43098842 - LTR16C LTR ERVL 0 491 189 3349 184 66 10 chr20 29055539 29055933 -43097949 + L1MB5 LINE L1 5415 5785 -389 1584 208 13 3 chr20 29055933 29056231 -43097651 + AluJo SINE Alu 1 301 -11 3349 184 66 10 chr20 29056231 29056547 -43097335 + L1MB5 LINE L1 5785 6165 -9 184 120 0 80 chr20 29056929 29056979 -43096903 + MIR3 SINE MIR 9 54 -154 740 276 142 3 chr20 29057857 29058180 -43095702 + LTR16C LTR ERVL 107 474 -17 449 259 142 6 chr20 29058337 29058499 -43095383 - MER5A DNA MER1_type -5 184 1 2315 114 3 0 chr20 29058617 29058923 -43094959 - AluSx SINE Alu -5 307 1 23 0 0 0 chr20 29059810 29059833 -43094049 + AT_rich Low_complexity Low_complexity 1 23 0 329 261 8 30 chr20 29059939 29060073 -43093809 - HAL1 LINE L1 -116 2391 2261 770 306 95 3 chr20 29060284 29060611 -43093271 + MLT1J LTR MaLR 32 388 -123 448 272 117 93 chr20 29061196 29061520 -43092362 - HAL1 LINE L1 -1160 1347 1016 395 185 12 12 chr20 29061610 29061691 -43092191 + MIR SINE MIR 31 111 -151 421 223 54 39 chr20 29061776 29061906 -43091976 + MLT1G1 LTR MaLR 2 133 -462 232 182 23 0 chr20 29061964 29062008 -43091874 + CT-rich Low_complexity Low_complexity 1 45 0 349 201 201 95 chr20 29062015 29062194 -43091688 + MLT1G1 LTR MaLR 210 407 -188 1843 132 74 15 chr20 29062855 29063373 -43090509 - MER51A LTR ERV1 -9 625 1 243 0 0 0 chr20 29063474 29063501 -43090381 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 180 77 0 0 chr20 29063502 29063528 -43090354 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 2341 82 0 0 chr20 29063528 29063809 -43090073 - AluSq SINE Alu -32 281 1 435 149 0 0 chr20 29064312 29064386 -43089496 + (CTG)n Simple_repeat Simple_repeat 2 75 0 506 204 171 17 chr20 29064467 29064648 -43089234 - LTR16A LTR ERVL -5 445 237 220 255 0 0 chr20 29064901 29064948 -43088934 - MIR SINE MIR -160 102 56 257 209 30 0 chr20 29065701 29065768 -43088114 - LTR16C LTR ERVL -60 431 363 2277 128 7 0 chr20 29065771 29066076 -43087806 + AluSx SINE Alu 1 307 -5 231 228 89 0 chr20 29067853 29067932 -43085950 + LTR16A1 LTR ERVL 12 97 -360 396 278 115 19 chr20 29067954 29068163 -43085719 + LTR16A1 LTR ERVL 228 456 -1 261 287 49 63 chr20 29068322 29068465 -43085417 - MER5A DNA MER1_type 0 189 49 312 107 20 0 chr20 29068787 29068843 -43085039 - MLT2B2 LTR ERVL -5 510 403 33 85 0 0 chr20 29068862 29068944 -43084938 + AT_rich Low_complexity Low_complexity 1 82 0 1686 204 38 25 chr20 29068948 29069525 -43084357 - MLT2B1 LTR ERVL -46 474 1 322 272 25 0 chr20 29070806 29070887 -43082995 - MIR SINE MIR -78 184 102 827 301 18 4 chr20 29071032 29071261 -43082621 + MLT2E LTR ERVL 58 289 -339 2151 121 0 0 chr20 29072051 29072364 -43081518 - AluSx SINE Alu 0 315 3 551 285 84 4 chr20 29072561 29072810 -43081072 - LTR16A LTR ERVL -125 325 57 618 256 119 0 chr20 29073411 29073571 -43080311 - MLT1J LTR MaLR -316 195 17 1054 250 77 81 chr20 29073595 29073899 -43079983 - L1ME2 LINE L1 -199 5965 5662 1963 117 3 24 chr20 29073899 29074190 -43079692 - AluSq SINE Alu -23 290 6 1054 250 77 81 chr20 29074190 29074353 -43079529 - L1ME2 LINE L1 -502 5662 5500 434 313 8 0 chr20 29074465 29074593 -43079289 + MER5B DNA MER1_type 18 146 -32 702 302 92 23 chr20 29074908 29075299 -43078583 + L2 LINE L2 2031 2448 -866 1639 213 121 11 chr20 29075308 29075754 -43078128 + MLT1D LTR MaLR 7 501 -4 424 241 27 0 chr20 29075765 29075877 -43078005 + L2 LINE L2 2460 2574 -740 1983 139 25 42 chr20 29075894 29076296 -43077586 - LTR56 LTR ERV1 0 445 51 204 113 38 57 chr20 29076301 29076333 -43077549 + T-rich Low_complexity Low_complexity 1 33 -19 429 123 9 85 chr20 29076333 29076439 -43077443 - L1MC2 LINE L1 0 6344 6247 204 113 38 57 chr20 29076439 29076459 -43077423 + T-rich Low_complexity Low_complexity 33 52 0 4807 117 10 18 chr20 29076466 29077253 -43076629 - L1PB3 LINE L1 -1 6153 5373 232 180 40 0 chr20 29077253 29077303 -43076579 - LTR56 LTR ERV1 -385 60 9 180 282 14 0 chr20 29077308 29077379 -43076503 + L2 LINE L2 2557 2628 -686 1182 271 124 31 chr20 29077381 29077834 -43076048 + MLT1J LTR MaLR 4 498 -13 788 307 69 26 chr20 29077855 29078316 -43075566 + L2 LINE L2 2638 3138 -175 4198 156 89 7 chr20 29078316 29079079 -43074803 + LTR1B LTR ERV1 1 826 0 788 307 69 26 chr20 29079079 29079261 -43074621 + L2 LINE L2 3138 3311 -2 2056 137 7 7 chr20 29079400 29079707 -43074175 + AluSx SINE Alu 1 307 -5 881 208 42 9 chr20 29079789 29080001 -43073881 + MER20 DNA MER1_type 1 219 0 198 0 0 0 chr20 29081337 29081359 -43072523 + (A)n Simple_repeat Simple_repeat 1 22 0 2149 148 0 0 chr20 29081360 29081671 -43072211 + AluSq SINE Alu 1 311 -2 808 207 53 0 chr20 29082443 29082612 -43071270 + MER45A DNA AcHobo 1 178 0 275 283 0 30 chr20 29083763 29083862 -43070020 + LTR67 LTR ERVL 457 552 -5 549 274 214 29 chr20 29084846 29085112 -43068770 + MLT1H LTR MaLR 57 272 -277 189 0 0 0 chr20 29085112 29085133 -43068749 + (CAGCC)n Simple_repeat Simple_repeat 5 25 0 549 274 214 29 chr20 29085133 29085282 -43068600 + MLT1H LTR MaLR 272 549 0 1677 192 51 0 chr20 29085417 29085709 -43068173 + AluJo SINE Alu 3 309 -3 345 225 9 99 chr20 29085760 29085871 -43068011 + L1MC4 LINE L1 6614 6714 -1328 228 406 71 18 chr20 29086875 29087045 -43066837 + L2 LINE L2 3093 3271 -1 340 279 116 100 chr20 29087815 29087934 -43065948 - L2 LINE L2 0 3313 3197 210 91 0 0 chr20 29087934 29087967 -43065915 + (CA)n Simple_repeat Simple_repeat 2 34 0 340 279 116 100 chr20 29087967 29088356 -43065526 - L2 LINE L2 -116 3197 2797 206 280 112 16 chr20 29088763 29088888 -43064994 - L2 LINE L2 -990 2324 2188 714 226 168 10 chr20 29089920 29090219 -43063663 - MLT1G LTR MaLR -7 583 163 446 183 35 22 chr20 29090222 29090455 -43063427 + GA-rich Low_complexity Low_complexity 1 236 0 213 178 0 0 chr20 29090476 29090521 -43063361 + G-rich Low_complexity Low_complexity 5 49 0 233 304 168 0 chr20 29090563 29090724 -43063158 - MLT1G LTR MaLR -407 188 1 1014 209 79 13 chr20 29091204 29091721 -43062161 - MER92B LTR ERV1 -3 633 38 211 216 0 0 chr20 29091721 29091772 -43062110 + T-rich Low_complexity Low_complexity 1 51 0 7219 31 0 0 chr20 29091773 29093318 -43060564 - L1PA4 LINE L1 -1 6154 4608 236 263 144 31 chr20 29095243 29095437 -43058445 + LTR33 LTR ERVL 306 521 0 2289 127 0 0 chr20 29095453 29095896 -43057986 + AluSx SINE Alu 1 443 0 516 89 0 0 chr20 29096288 29096367 -43057515 + (GA)n Simple_repeat Simple_repeat 1 79 0 950 192 0 0 chr20 29097455 29097611 -43056271 - FRAM SINE Alu -20 156 1 668 277 49 28 chr20 29097913 29098205 -43055677 + MLT1H1 LTR MaLR 11 351 -244 1116 177 63 11 chr20 29098241 29098512 -43055370 - MLT1C LTR MaLR -12 455 171 1212 101 6 22 chr20 29098513 29098691 -43055191 + LTR9 LTR ERV1 438 612 0 3603 157 16 10 chr20 29098706 29099312 -43054570 + HUERS-P3 LTR ERV1 15 624 -8295 1641 99 13 9 chr20 29099318 29099551 -43054331 + LTR9 LTR ERV1 293 526 -86 933 140 39 28 chr20 29099562 29099741 -43054141 - MLT1C LTR MaLR -286 181 1 246 350 10 19 chr20 29100414 29100517 -43053365 - MIR SINE MIR -110 152 51 264 247 0 0 chr20 29101855 29101940 -43051942 + (TG)n Simple_repeat Simple_repeat 2 86 0 2185 129 0 10 chr20 29103234 29103545 -43050337 - AluSp SINE Alu -5 308 1 1282 188 58 0 chr20 29103653 29103893 -43049989 + MER54B LTR ERVL 514 767 -26 466 290 159 22 chr20 29104587 29105409 -43048473 - L2 LINE L2 -3 3310 2293 1240 153 59 81 chr20 29106712 29106869 -43047013 - AluJo SINE Alu -12 300 152 1772 152 14 10 chr20 29106869 29107165 -43046717 - AluJb SINE Alu -15 297 1 1240 153 59 81 chr20 29107165 29107314 -43046568 - AluJo SINE Alu -160 152 1 1728 47 0 0 chr20 29107332 29107543 -43046339 - L1PA4 LINE L1 -3 6152 5942 248 282 12 0 chr20 29107543 29107628 -43046254 - MER58B DNA MER1_type -9 332 247 780 194 92 0 chr20 29107729 29107946 -43045936 - Charlie5 DNA MER1_type -27 2585 2349 599 222 0 6 chr20 29108169 29108349 -43045533 + (TG)n Simple_repeat Simple_repeat 2 180 0 270 200 70 113 chr20 29110323 29110438 -43043444 + MLT1I LTR MaLR 287 396 -13 2061 120 0 0 chr20 29110618 29110959 -43042923 + AluSx SINE Alu 1 341 0 315 254 36 9 chr20 29112099 29112209 -43041673 + LTR16A1 LTR ERVL 367 455 -2 280 216 45 54 chr20 29113320 29113431 -43040451 + MLT1K LTR MaLR 477 586 -2 814 148 7 27 chr20 29113462 29113611 -43040271 - FRAM SINE Alu 0 176 31 581 78 0 0 chr20 29114018 29114095 -43039787 - Alu SINE Alu -233 78 2 261 222 83 65 chr20 29114743 29114851 -43039031 + L2 LINE L2 3197 3306 -7 1512 179 3 13 chr20 29115407 29115708 -43038174 + AluJb SINE Alu 14 311 -1 223 348 11 0 chr20 29115969 29116061 -43037821 + L3 LINE CR1 696 788 -789 278 301 41 0 chr20 29116069 29116142 -43037740 - L3 LINE CR1 -88 1489 1414 1189 180 65 29 chr20 29116209 29116487 -43037395 - L1MA9 LINE L1 -22 6290 6003 180 289 184 0 chr20 29116544 29116620 -43037262 - MER5B DNA MER1_type -15 163 74 1292 223 144 3 chr20 29116627 29117003 -43036879 + MER63B DNA MER1_type 1 429 -7 1020 141 0 0 chr20 29117514 29117691 -43036191 + (GGGA)n Simple_repeat Simple_repeat 4 180 0 295 269 96 58 chr20 29117794 29117950 -43035932 - MIR SINE MIR -45 217 56 319 274 26 26 chr20 29118171 29118284 -43035598 + MLT1F1 LTR MaLR 35 147 -420 348 152 0 0 chr20 29118460 29118526 -43035356 + (TG)n Simple_repeat Simple_repeat 1 66 0 1308 212 71 33 chr20 29119259 29119627 -43034255 - MLT1C LTR MaLR 0 467 86 228 279 93 70 chr20 29120585 29120757 -43033125 - MIR SINE MIR -69 193 18 376 241 264 0 chr20 29121715 29121889 -43031993 + HAL1 LINE L1 1317 1536 -971 808 131 0 148 chr20 29121914 29122117 -43031765 + AluSg/x SINE Alu 134 310 0 1775 268 82 11 chr20 29122119 29122171 -43031711 + HAL1 LINE L1 1548 1595 -912 1916 179 45 8 chr20 29122171 29122523 -43031359 - MLT1A1 LTR MaLR 0 365 1 1775 268 82 11 chr20 29122523 29123093 -43030789 + HAL1 LINE L1 1595 2214 -293 270 194 0 0 chr20 29123107 29123169 -43030713 + (TG)n Simple_repeat Simple_repeat 1 62 0 421 278 26 64 chr20 29123716 29123982 -43029900 + HAL1 LINE L1 2241 2496 -11 23 33 0 0 chr20 29124297 29124327 -43029555 + AT_rich Low_complexity Low_complexity 1 30 0 248 271 0 0 chr20 29124330 29124389 -43029493 - MIR SINE MIR 0 262 204 207 0 0 0 chr20 29124389 29124412 -43029470 + (T)n Simple_repeat Simple_repeat 1 23 0 8084 8 0 0 chr20 29125057 29126406 -43027476 - L1PA2 LINE L1 0 6155 4806 209 329 24 0 chr20 29126428 29126510 -43027372 - MIR SINE MIR -77 185 102 1746 191 24 58 chr20 29126816 29127046 -43026836 - MLT1B LTR MaLR -21 369 156 1791 111 0 0 chr20 29127046 29127298 -43026584 - AluSx SINE Alu 0 312 61 1746 191 24 58 chr20 29127298 29127449 -43026433 - MLT1B LTR MaLR -234 156 1 552 262 49 0 chr20 29128361 29128525 -43025357 + MER5A DNA MER1_type 10 181 -8 1909 119 20 7 chr20 29128717 29129019 -43024863 - AluSx SINE Alu -6 306 1 233 253 44 55 chr20 29129334 29129425 -43024457 + MER5B DNA MER1_type 1 90 -88 451 242 8 47 chr20 29129491 29129619 -43024263 - LTR16C LTR ERVL -2 489 367 401 226 16 24 chr20 29129843 29129967 -43023915 + GA-rich Low_complexity Low_complexity 4 126 0 530 29 0 14 chr20 29130960 29131029 -43022853 + (GGATG)n Simple_repeat Simple_repeat 2 69 0 347 319 38 38 chr20 29131619 29131804 -43022078 - L2 LINE L2 -1 3312 3128 2180 169 97 13 chr20 29131808 29132274 -43021608 - LTR22 LTR ERVK -4 505 1 373 138 15 0 chr20 29132479 29132544 -43021338 - MER41B LTR ERV1 -88 547 482 611 282 29 0 chr20 29133960 29134130 -43019752 + MER34B-int LTR ERV1 6100 6274 -57 771 250 79 64 chr20 29134168 29134710 -43019172 + MER34B LTR ERV1 11 551 -14 261 218 182 47 chr20 29136123 29136270 -43017612 - MIR SINE MIR -68 194 32 204 273 78 13 chr20 29136388 29136465 -43017417 + MIR SINE MIR 61 142 -66 238 269 0 0 chr20 29136850 29136902 -43016980 - MER5A DNA MER1_type -129 60 9 24 0 0 0 chr20 29137569 29137593 -43016289 + AT_rich Low_complexity Low_complexity 1 24 0 375 294 20 0 chr20 29138220 29138322 -43015560 - MIR SINE MIR -106 156 53 293 175 18 0 chr20 29138757 29138801 -43015081 - MLT2B2 LTR ERVL 0 515 471 11977 116 50 19 chr20 29138801 29140018 -43013864 + Tigger1 DNA MER2_type 1 1300 -1118 252 0 0 0 chr20 29140018 29140046 -43013836 + (CA)n Simple_repeat Simple_repeat 1 28 0 11977 116 50 19 chr20 29140046 29140733 -43013149 + Tigger1 DNA MER2_type 1300 1964 -454 402 260 20 13 chr20 29140776 29140926 -43012956 - L1MC4 LINE L1 0 8042 7892 318 253 0 0 chr20 29140963 29141038 -43012844 - L1MC4 LINE L1 -126 7916 7842 622 176 15 23 chr20 29141040 29141171 -43012711 - Tigger1 DNA MER2_type -522 1896 1767 331 233 135 38 chr20 29141173 29141306 -43012576 - L1ME4a LINE L1 -33 6088 5943 3287 113 9 0 chr20 29141345 29141807 -43012075 + Tigger1 DNA MER2_type 1952 2417 -1 1454 219 120 81 chr20 29141819 29142276 -43011606 - MLT2B2 LTR ERVL -40 475 1 282 246 0 46 chr20 29142277 29142293 -43011589 + L2 LINE L2 3209 3224 -89 1754 169 68 0 chr20 29142293 29142619 -43011263 + MER7A DNA MER2_type 1 346 0 282 246 0 46 chr20 29142619 29142667 -43011215 + L2 LINE L2 3224 3270 -43 23 0 0 0 chr20 29143751 29143774 -43010108 + AT_rich Low_complexity Low_complexity 1 23 0 204 40 0 0 chr20 29143882 29143907 -43009975 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 216 97 0 0 chr20 29143932 29143963 -43009919 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 1609 160 41 20 chr20 29144023 29144316 -43009566 + AluJo SINE Alu 1 299 -13 544 134 0 12 chr20 29144327 29144430 -43009452 - AluSg/x SINE Alu 0 305 204 31 0 0 0 chr20 29144430 29144461 -43009421 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr20 29144820 29144845 -43009037 + AT_rich Low_complexity Low_complexity 1 25 0 537 252 7 37 chr20 29144856 29144991 -43008891 + FLAM_C SINE Alu 3 133 0 498 71 94 0 chr20 29145135 29145275 -43008607 + GA-rich Low_complexity Low_complexity 1 153 0 410 292 90 6 chr20 29145519 29145697 -43008185 - LTR16C LTR ERVL 0 491 299 182 235 0 59 chr20 29146608 29146659 -43007223 + L2 LINE L2 589 636 -2678 6485 86 26 21 chr20 29146815 29148158 -43005724 - L1PA11 LINE L1 0 6174 4827 1010 207 159 45 chr20 29198158 29198511 -42955371 + MLT1D LTR MaLR 113 505 0 183 274 20 0 chr20 29199753 29199804 -42954078 - MIR SINE MIR 0 262 211 550 263 111 78 chr20 29199895 29200290 -42953592 - MLT1J LTR MaLR -59 452 45 470 181 13 9 chr20 29200634 29200867 -42953015 + (TG)n Simple_repeat Simple_repeat 1 234 0 357 220 11 6 chr20 29200897 29201074 -42952808 + (TG)n Simple_repeat Simple_repeat 2 179 0 271 214 16 0 chr20 29201119 29201245 -42952637 + (TG)n Simple_repeat Simple_repeat 2 129 0 649 263 42 24 chr20 29202730 29202943 -42950939 + MER58A DNA MER1_type 7 223 -1 591 206 9 9 chr20 29203978 29204202 -42949680 + (TGGA)n Simple_repeat Simple_repeat 1 224 0 248 299 17 43 chr20 29205534 29205651 -42948231 - MLT1K LTR MaLR -222 366 253 330 87 0 0 chr20 29205689 29205735 -42948147 + (CA)n Simple_repeat Simple_repeat 2 47 0 357 282 153 32 chr20 29205755 29205971 -42947911 - LTR16C LTR ERVL -238 253 12 473 263 44 22 chr20 29206176 29206313 -42947569 + MIR SINE MIR 121 260 -2 403 259 14 21 chr20 29206507 29206650 -42947232 - L1MD3 LINE L1 -19 7976 7835 361 269 0 0 chr20 29206656 29206749 -42947133 - L1MD2 LINE L1 -232 6127 6035 767 142 24 0 chr20 29206946 29207073 -42946809 + L1PB1 LINE L1 6012 6141 -10 597 137 11 0 chr20 29206978 29207073 -42946809 + L1PB1 LINE L1 6046 6172 0 219 32 32 0 chr20 29207073 29207104 -42946778 + (TAA)n Simple_repeat Simple_repeat 2 180 0 921 223 104 73 chr20 29207290 29207364 -42946518 + L1ME3A LINE L1 5593 5663 -507 2336 86 36 10 chr20 29207364 29207668 -42946214 + AluSq SINE Alu 1 312 -1 921 223 104 73 chr20 29207668 29207978 -42945904 + L1ME3A LINE L1 5663 5989 -181 270 291 91 0 chr20 29207982 29208092 -42945790 + MIR SINE MIR 126 245 -17 2124 204 44 48 chr20 29208509 29208569 -42945313 + MER68 LTR ERV1 1 60 -502 2356 97 0 7 chr20 29208569 29208879 -42945003 + AluSc SINE Alu 1 308 -1 2124 204 44 48 chr20 29208879 29209382 -42944500 + MER68 LTR ERV1 60 562 0 1634 164 3 84 chr20 29209570 29209905 -42943977 + AluJb SINE Alu 5 312 0 277 279 8 25 chr20 29209945 29210067 -42943815 + (TGAG)n Simple_repeat Simple_repeat 1 120 0 * 423 277 17 11 chr20 29209993 29210170 -42943712 + (TG)n Simple_repeat Simple_repeat 2 179 0 358 316 117 12 chr20 29211616 29211787 -42942095 + MIR SINE MIR 2 190 -72 27 29 0 0 chr20 29211810 29211844 -42942038 + AT_rich Low_complexity Low_complexity 1 34 0 233 299 0 0 chr20 29211951 29212018 -42941864 + MIR SINE MIR 106 172 -90 195 218 0 36 chr20 29212738 29212793 -42941089 - MIR SINE MIR -65 143 91 1729 187 42 6 chr20 29213341 29213673 -42940209 - MER2 DNA MER2_type 0 344 1 2316 103 0 7 chr20 29214066 29214368 -42939514 + AluSq SINE Alu 1 300 -13 2300 113 3 0 chr20 29215632 29215943 -42937939 + AluSx SINE Alu 1 312 0 1052 228 13 0 chr20 29215945 29216177 -42937705 + L1MD3 LINE L1 7746 7980 -15 294 266 109 23 chr20 29216218 29216346 -42937536 + MIR3 SINE MIR 7 145 -63 1564 124 4 13 chr20 29217127 29217361 -42936521 + AluJb SINE Alu 40 271 -41 561 244 26 0 chr20 29217583 29217720 -42936162 + L1MA10 LINE L1 5990 6293 -34 1886 149 16 7 chr20 29217720 29218029 -42935853 + AluJb SINE Alu 1 312 0 216 0 0 0 chr20 29218548 29218572 -42935310 + (T)n Simple_repeat Simple_repeat 1 24 0 552 240 201 10 chr20 29219364 29219677 -42934205 - L1M4 LINE L1 -806 5340 4968 480 259 0 0 chr20 29219676 29219811 -42934071 - L1M4 LINE L1 -2390 3756 3622 * 447 296 28 51 chr20 29220021 29220189 -42933693 - LTR33 LTR ERVL -309 212 49 2051 182 124 19 chr20 29220189 29220656 -42933226 - MLT2B1 LTR ERVL -4 516 1 447 296 28 51 chr20 29220656 29220703 -42933179 - LTR33 LTR ERVL -472 49 2 1946 211 21 10 chr20 29220843 29221232 -42932650 + MER82 DNA MER2_type 1 393 -260 759 154 17 0 chr20 29221244 29221361 -42932521 + FLAM_C SINE Alu 9 127 -16 279 213 53 13 chr20 29221363 29221438 -42932444 + MER82 DNA MER2_type 385 462 -191 1782 141 0 0 chr20 29221456 29221718 -42932164 + AluSx SINE Alu 44 305 -7 994 254 10 0 chr20 29221725 29221926 -42931956 + MER82 DNA MER2_type 451 653 0 23 0 0 0 chr20 29222524 29222547 -42931335 + AT_rich Low_complexity Low_complexity 1 23 0 1447 183 0 20 chr20 29222649 29222895 -42930987 + AluJo SINE Alu 1 241 -71 28 0 0 0 chr20 29222895 29222923 -42930959 + AT_rich Low_complexity Low_complexity 1 28 0 44239 28 21 1 chr20 29222984 29229016 -42924866 - L1HS LINE L1 0 6155 2 444 90 0 0 chr20 29229022 29229089 -42924793 + AluJo SINE Alu 245 311 -1 275 189 104 21 chr20 29229889 29230000 -42923882 + MLT1H LTR MaLR 14 175 -374 2440 157 19 19 chr20 29230444 29230843 -42923039 - MER34 LTR ERV1 -30 512 111 2411 70 37 0 chr20 29230843 29231141 -42922741 + AluY SINE Alu 1 309 -2 2440 157 19 19 chr20 29231141 29231156 -42922726 - MER34 LTR ERV1 -430 112 98 316 211 18 0 chr20 29231178 29231235 -42922647 - MER34 LTR ERV1 -419 123 66 1986 101 3 85 chr20 29231238 29231554 -42922328 - AluSx SINE Alu -14 298 9 780 212 7 0 chr20 29231632 29231778 -42922104 + MER3 DNA MER1_type 63 209 0 21 0 0 0 chr20 29234567 29234588 -42919294 + GC_rich Low_complexity Low_complexity 1 21 0 516 246 51 0 chr20 29235893 29236031 -42917851 + MIR SINE MIR 77 221 -41 2206 89 0 36 chr20 29236166 29236469 -42917413 - AluSg SINE Alu -18 292 1 2448 86 0 0 chr20 29237741 29238044 -42915838 + AluSx SINE Alu 1 303 -9 33 56 0 0 chr20 29238507 29238561 -42915321 + AT_rich Low_complexity Low_complexity 1 54 0 188 294 87 22 chr20 29238939 29239031 -42914851 + L2 LINE L2 3216 3313 0 1746 149 7 20 chr20 29239148 29239444 -42914438 - AluJo SINE Alu -19 293 2 2330 106 0 0 chr20 29239517 29239810 -42914072 - AluSg SINE Alu -16 294 2 440 235 39 33 chr20 29239864 29240017 -42913865 - HAL1 LINE L1 -105 2402 2249 30 45 0 0 chr20 29240160 29240204 -42913678 + AT_rich Low_complexity Low_complexity 1 44 0 877 318 160 28 chr20 29240555 29240773 -42913109 - L1M4 LINE L1 -2155 3991 3803 1834 180 3 0 chr20 29240773 29241084 -42912798 - AluJb SINE Alu 0 312 1 877 318 160 28 chr20 29241084 29241801 -42912081 - L1M4 LINE L1 -2343 3803 2932 733 142 8 24 chr20 29241984 29242111 -42911771 - FLAM_C SINE Alu -7 126 2 1924 114 23 0 chr20 29242123 29242385 -42911497 - AluSx SINE Alu -18 294 27 351 344 103 13 chr20 29242387 29242765 -42911117 - L1M4 LINE L1 -3435 2711 2300 251 218 3 3 chr20 29242818 29242877 -42911005 + MLT1I LTR MaLR 83 139 -270 524 301 61 27 chr20 29243670 29243966 -42909916 - HAL1b LINE L1 -824 524 219 1826 126 39 0 chr20 29244421 29244707 -42909175 - L1PA16 LINE L1 -1 6165 5869 928 170 6 0 chr20 29246218 29246389 -42907493 - L1MA6 LINE L1 -5 6295 6124 267 339 85 26 chr20 29248040 29248229 -42905653 + MIR SINE MIR 43 242 -20 1279 191 103 131 chr20 29248661 29248859 -42905023 - L1MB8 LINE L1 -10 6168 5966 1255 182 97 57 chr20 29248859 29249210 -42904672 - MLT1A1 LTR MaLR 0 365 1 1279 191 103 131 chr20 29249210 29249389 -42904493 - L1MB8 LINE L1 -212 5966 5784 2083 112 7 7 chr20 29249389 29249685 -42904197 - AluSx SINE Alu -16 296 1 1279 191 103 131 chr20 29249685 29249828 -42904054 - L1MB8 LINE L1 -394 5784 5639 1538 120 127 40 chr20 29249828 29250104 -42903778 - AluSx SINE Alu -12 300 1 1279 191 103 131 chr20 29250104 29250354 -42903528 - L1MB8 LINE L1 -539 5639 5417 426 340 38 10 chr20 29250434 29250670 -42903212 - MIR SINE MIR -1 261 23 260 318 65 24 chr20 29250980 29251150 -42902732 + L3 LINE CR1 1331 1507 -70 2325 102 0 0 chr20 29251509 29251804 -42902078 - AluSq SINE Alu -18 295 1 427 265 168 22 chr20 29251804 29251989 -42901893 + MIR SINE MIR 48 259 -3 1962 128 3 3 chr20 29253193 29253526 -42900356 - AluSx SINE Alu 0 333 1 927 53 76 38 chr20 29253714 29253846 -42900036 + MER85 DNA T2_type 2 138 -1 742 273 65 60 chr20 29253938 29254352 -42899530 + L2 LINE L2 2898 3313 0 1958 114 18 0 chr20 29254612 29254884 -42898998 - AluSg SINE Alu -33 277 1 1645 221 19 11 chr20 29255544 29255906 -42897976 - MLT1A1 LTR MaLR 0 365 1 196 211 19 39 chr20 29255974 29256026 -42897856 - MIR SINE MIR -189 73 23 1487 102 46 141 chr20 29256153 29256270 -42897612 + AluJo SINE Alu 23 150 -162 2182 108 0 14 chr20 29256270 29256566 -42897316 - AluSx SINE Alu -20 292 1 1487 102 46 141 chr20 29256566 29256753 -42897129 + AluJo SINE Alu 150 298 -14 601 286 124 8 chr20 29257194 29257435 -42896447 - MER46C DNA MER2_type -50 288 20 321 276 149 29 chr20 29258941 29259115 -42894767 + L1ME4a LINE L1 5869 6063 -58 1013 254 116 90 chr20 29260544 29261627 -42892255 + L2 LINE L2 2187 3313 0 812 116 7 43 chr20 29262302 29262440 -42891442 + FLAM_C SINE Alu 1 133 0 1440 193 4 14 chr20 29262465 29262740 -42891142 - AluJo SINE Alu -40 272 1 468 300 13 33 chr20 29262909 29263059 -42890823 + L2 LINE L2 3121 3267 -5 1259 208 78 11 chr20 29263285 29263569 -42890313 + MER58B DNA MER1_type 39 341 0 1945 97 22 7 chr20 29263787 29264092 -42889790 - AluSq SINE Alu 0 309 1 519 312 36 53 chr20 29264351 29264688 -42889194 - MLT1J1 LTR MaLR -101 345 15 3882 192 58 14 chr20 29265252 29266791 -42887091 - L1MB7 LINE L1 -16 6168 4563 2033 212 98 13 chr20 29266796 29266838 -42887044 - MLT2B1 LTR ERVL -8 512 475 288 91 0 0 chr20 29266838 29266882 -42887000 + (TG)n Simple_repeat Simple_repeat 2 45 0 2033 212 98 13 chr20 29266882 29267311 -42886571 - MLT2B1 LTR ERVL -45 475 1 2936 210 19 23 chr20 29267311 29268007 -42885875 - L1MB7 LINE L1 -1581 4565 3873 256 75 50 0 chr20 29268016 29268056 -42885826 - L1MDa LINE L1 -2228 4312 4271 * 720 166 20 7 chr20 29268041 29268192 -42885690 - L1MDa LINE L1 -2203 4337 4185 1468 247 20 14 chr20 29268204 29268548 -42885334 - MER77 LTR ERV1 -6 599 254 985 198 44 0 chr20 29268548 29268775 -42885107 - L1MDa LINE L1 -2367 4173 3937 976 215 119 31 chr20 29268779 29269333 -42884549 - L1MDa LINE L1 -2963 3577 2975 369 62 0 0 chr20 29269334 29269382 -42884500 + (TC)n Simple_repeat Simple_repeat 1 48 0 975 157 0 6 chr20 29269382 29269548 -42884334 - AluSx SINE Alu 0 312 148 657 163 0 0 chr20 29269548 29269646 -42884236 - AluSx SINE Alu -214 99 2 1446 190 79 20 chr20 29269649 29269981 -42883901 - L1MDa LINE L1 -3553 2987 2605 2003 137 3 0 chr20 29269981 29270287 -42883595 - AluSx SINE Alu -5 307 1 1446 190 79 20 chr20 29270287 29270473 -42883409 - L1MDa LINE L1 -3935 2605 2431 1360 154 36 24 chr20 29270473 29270720 -42883162 - AluJb SINE Alu 0 312 63 813 163 0 0 chr20 29270721 29270844 -42883038 - AluJb SINE Alu -188 124 2 6811 201 143 60 chr20 29270848 29270872 -42883010 - L1MDa LINE L1 -4135 2405 2384 1248 219 4 8 chr20 29270872 29271109 -42882773 + MER8 DNA MER2_type 1 236 -3 6811 201 143 60 chr20 29271109 29271601 -42882281 - L1MDa LINE L1 -4156 2384 1934 548 131 0 24 chr20 29271601 29271685 -42882197 - AluS SINE Alu -225 87 6 6811 201 143 60 chr20 29271685 29271945 -42881937 - L1MDa LINE L1 -4606 1934 1697 2072 124 0 7 chr20 29271945 29272252 -42881630 - AluSx SINE Alu -7 305 1 6811 201 143 60 chr20 29272252 29273612 -42880270 - L1MDa LINE L1 -4843 1697 1 728 153 34 17 chr20 29274112 29274230 -42879652 + 5S rRNA rRNA 1 120 -1 2081 118 0 7 chr20 29274300 29274604 -42879278 + AluSx SINE Alu 1 302 -10 2241 93 3 0 chr20 29276009 29276309 -42877573 + AluSc SINE Alu 1 301 -8 25 0 0 0 chr20 29276309 29276334 -42877548 + AT_rich Low_complexity Low_complexity 1 25 0 2132 105 0 0 chr20 29276383 29276700 -42877182 + AluSq SINE Alu 1 317 0 1551 171 0 42 chr20 29276787 29277096 -42876786 - AluJb SINE Alu -16 296 1 3206 135 38 0 chr20 29281473 29281948 -42871934 + MER1A DNA MER1_type 37 529 0 323 346 99 9 chr20 29287464 29287796 -42866086 - L1ME4a LINE L1 -176 5945 5584 288 154 0 0 chr20 29289799 29289851 -42864031 + CT-rich Low_complexity Low_complexity 1 52 0 224 200 117 0 chr20 29291365 29291425 -42862457 + MIR SINE MIR 74 140 -122 198 200 0 0 chr20 29291501 29291536 -42862346 - MIR SINE MIR -102 160 126 22 35 0 0 chr20 29293015 29293044 -42860838 + GC_rich Low_complexity Low_complexity 1 29 0 659 234 208 4 chr20 29293665 29293934 -42859948 + MER110A LTR ERV1 144 467 -1 3106 169 86 14 chr20 29293963 29294625 -42859257 + MER67C LTR ERV1 1 710 0 278 95 0 0 chr20 29294640 29294682 -42859200 + L2 LINE L2 3272 3313 0 1923 107 3 31 chr20 29294820 29294955 -42858927 + AluSx SINE Alu 1 138 -174 2033 129 0 0 chr20 29294955 29295249 -42858633 + AluSx SINE Alu 1 294 -18 1923 107 3 31 chr20 29295249 29295403 -42858479 + AluSx SINE Alu 138 282 -30 3381 175 41 37 chr20 29295489 29296219 -42857663 + MER49 LTR ERV1 184 916 -7 469 223 112 28 chr20 29296390 29296605 -42857277 + L1ME4a LINE L1 5683 5915 -206 185 0 40 0 chr20 29297561 29297586 -42856296 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1515 81 0 0 chr20 29297586 29297784 -42856098 - AluSg/x SINE Alu -33 277 80 545 282 144 40 chr20 29298943 29299291 -42854591 - MLT1J LTR MaLR -4 507 124 187 186 23 23 chr20 29299851 29299894 -42853988 + MER5B DNA MER1_type 34 76 -102 888 128 0 8 chr20 29299907 29300040 -42853842 + AluSg/x SINE Alu 128 259 -53 441 0 0 0 chr20 29300067 29300116 -42853766 + (CA)n Simple_repeat Simple_repeat 1 49 0 271 250 66 13 chr20 29300129 29300205 -42853677 - MER5B DNA MER1_type -96 82 3 2044 110 7 0 chr20 29301497 29301787 -42852095 - AluSx SINE Alu -20 292 1 315 223 0 87 chr20 29301790 29301893 -42851989 - MER2 DNA MER2_type -251 94 1 333 302 22 36 chr20 29302815 29302831 -42851051 - MIR SINE MIR -27 235 220 1793 142 30 26 chr20 29302831 29303170 -42850712 + MER2 DNA MER2_type 1 340 -4 333 302 22 36 chr20 29303170 29303292 -42850590 - MIR SINE MIR -42 220 99 248 270 80 58 chr20 29305670 29305807 -42848075 - MIR SINE MIR -13 249 110 308 269 0 0 chr20 29305993 29306060 -42847822 + L2 LINE L2 3242 3308 -5 1463 201 26 27 chr20 29306173 29306612 -42847270 - LTR2B LTR ERV1 0 490 1 295 295 215 16 chr20 29306709 29306960 -42846922 + MLT1K LTR MaLR 225 525 -63 504 345 11 0 chr20 29307029 29307206 -42846676 + MIR SINE MIR 76 254 -8 223 202 3 0 chr20 29307811 29307857 -42846025 + MIR SINE MIR 108 155 -53 344 326 0 0 chr20 29308499 29308591 -42845291 + (CA)n Simple_repeat Simple_repeat 2 93 0 332 349 80 11 chr20 29308624 29308888 -42844994 + MLT1G1 LTR MaLR 1 282 -313 655 202 8 0 chr20 29308973 29309092 -42844790 + MLT1G1 LTR MaLR 461 580 -15 2214 105 17 3 chr20 29309253 29309549 -42844333 + AluSg SINE Alu 1 300 -10 316 211 189 0 chr20 29310194 29310289 -42843593 - LTR16C LTR ERVL 0 491 379 814 158 79 0 chr20 29310294 29310446 -42843436 - MLT1D LTR MaLR -339 166 3 261 139 0 0 chr20 29310904 29310947 -42842935 + (TA)n Simple_repeat Simple_repeat 2 44 0 745 99 0 0 chr20 29310956 29311057 -42842825 - HY3 scRNA scRNA 0 101 1 185 372 35 0 chr20 29312392 29312505 -42841377 + L2 LINE L2 2948 3064 -208 599 269 96 10 chr20 29312638 29312846 -42841036 + MIR SINE MIR 37 262 0 198 103 0 0 chr20 29312917 29312946 -42840936 + (CA)n Simple_repeat Simple_repeat 1 29 0 230 200 214 0 chr20 29313066 29313136 -42840746 + L2 LINE L2 3228 3312 -1 366 173 17 0 chr20 29313903 29313975 -42839907 - MER4B LTR ERV1 -9 655 527 323 102 20 0 chr20 29313975 29314024 -42839858 - MER4C LTR ERV1 -114 351 302 1142 143 122 13 chr20 29314148 29314378 -42839504 + MER4A LTR ERV1 1 255 -409 2351 107 34 11 chr20 29314399 29314754 -42839128 + Tigger1 DNA MER2_type 2055 2417 -1 1148 200 85 76 chr20 29314757 29315200 -42838682 - L1MC/D LINE L1 -649 5987 5537 6204 95 15 2 chr20 29315200 29317045 -42836837 - L1PA13 LINE L1 -8 6155 4291 1148 200 85 76 chr20 29317045 29317391 -42836491 - L1MC/D LINE L1 -1099 5537 5196 453 123 93 11 chr20 29317550 29317658 -42836224 - L1MEc LINE L1 -3918 2640 2504 2934 158 16 6 chr20 29318387 29318895 -42834987 - L1MB3 LINE L1 -2 6181 5669 348 207 9 78 chr20 29319525 29319641 -42834241 + L1MDa LINE L1 1857 1992 -4576 347 235 0 68 chr20 29319744 29319876 -42834006 + L1MDa LINE L1 3289 3411 -3129 3659 117 0 4 chr20 29320296 29320809 -42833073 + MER9 LTR ERVK 1 511 0 47515 65 10 1 chr20 29320809 29321514 -42832368 + HERVK9 LTR ERVK 1 698 -5218 687 134 17 25 chr20 29321514 29321633 -42832249 + L1PA8 LINE L1 6049 6166 -6 207 0 0 0 chr20 29321642 29321665 -42832217 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 47515 65 10 1 chr20 29321665 29326798 -42827084 + HERVK9 LTR ERVK 705 5907 -9 1890 159 24 0 chr20 29326898 29327193 -42826689 + AluSx SINE Alu 1 302 -10 346 231 19 39 chr20 29327220 29327324 -42826558 + L1MEc LINE L1 2156 2257 -4139 990 234 102 75 chr20 29327342 29327741 -42826141 + L1MEc LINE L1 2218 2605 -3610 181 0 0 65 chr20 29327741 29327772 -42826110 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 990 234 102 75 chr20 29327772 29327807 -42826075 + L1MEc LINE L1 2605 2638 -3577 2112 142 30 0 chr20 29327807 29328110 -42825772 + AluSx SINE Alu 1 312 0 990 234 102 75 chr20 29328110 29328450 -42825432 + L1MEc LINE L1 2638 3014 -3201 326 267 17 33 chr20 29329710 29329890 -42823992 + (TG)n Simple_repeat Simple_repeat 2 178 0 374 225 37 9 chr20 29329939 29330269 -42823613 + (TG)n Simple_repeat Simple_repeat 1 339 0 451 329 64 7 chr20 29330578 29330873 -42823009 - L1ME3A LINE L1 -93 6077 5766 7811 17 1 0 chr20 29331131 29332010 -42821872 - L1PA3 LINE L1 -2 6153 5274 697 141 7 7 chr20 29333490 29333632 -42820250 + (TCCA)n Simple_repeat Simple_repeat 1 142 0 297 163 125 0 chr20 29336050 29336130 -42817752 + MER5C DNA MER1_type 233 322 -2 831 190 92 31 chr20 29336538 29336733 -42817149 - MLT1E1 LTR MaLR 0 654 448 683 268 16 0 chr20 29336733 29336916 -42816966 - L1ME3A LINE L1 -1308 4838 4653 1018 244 26 19 chr20 29336971 29337237 -42816645 - MLT1E1 LTR MaLR -386 268 1 1902 174 34 92 chr20 29338062 29338307 -42815575 + MLT1D LTR MaLR 58 263 -242 2370 189 36 40 chr20 29338307 29338827 -42815055 - MLT2B1 LTR ERVL 0 520 3 1902 174 34 92 chr20 29338827 29339057 -42814825 + MLT1D LTR MaLR 263 505 0 6398 99 8 3 chr20 29339131 29341055 -42812827 - L1PA14 LINE L1 -3 6158 4233 2503 166 34 4 chr20 29341055 29341520 -42812362 + L1MA9 LINE L1 5828 6310 -2 195 162 0 0 chr20 29341836 29341873 -42812009 + (TG)n Simple_repeat Simple_repeat 1 37 0 342 269 170 7 chr20 29342388 29342529 -42811353 + MER5A DNA MER1_type 10 173 -16 490 245 92 18 chr20 29342552 29342715 -42811167 - MER5B DNA MER1_type 0 178 4 261 305 72 40 chr20 29342744 29342967 -42810915 + L1MB2 LINE L1 5576 5805 -2003 319 58 0 159 chr20 29343322 29343391 -42810491 - MLT2A1 LTR ERVL 0 453 396 620 38 71 28 chr20 29343414 29343630 -42810252 + (TA)n Simple_repeat Simple_repeat 1 225 0 521 87 74 0 chr20 29343648 29343882 -42810000 + (TA)n Simple_repeat Simple_repeat 1 251 0 2925 82 22 12 chr20 29343882 29344283 -42809599 - MLT2A1 LTR ERVL -39 405 1 195 195 0 0 chr20 29345465 29345506 -42808376 - MIR SINE MIR -44 218 178 240 236 38 85 chr20 29345717 29345823 -42808059 - L2 LINE L2 -9 3304 3204 277 254 15 100 chr20 29346832 29346962 -42806920 - L2 LINE L2 0 3272 3154 501 262 146 6 chr20 29347179 29347315 -42806567 - MER5A DNA MER1_type -2 187 23 186 43 0 0 chr20 29347315 29347338 -42806544 + (CTG)n Simple_repeat Simple_repeat 1 23 0 501 262 146 6 chr20 29347338 29347365 -42806517 - MER5A DNA MER1_type -166 23 1 204 125 0 0 chr20 29348010 29348042 -42805840 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 3977 127 35 9 chr20 29348194 29348831 -42805051 - L1PA15 LINE L1 -17 6148 5496 210 71 0 0 chr20 29349136 29349164 -42804718 + (T)n Simple_repeat Simple_repeat 1 28 0 7526 104 4 19 chr20 29349609 29350682 -42803200 - MER11C LTR ERVK -14 1057 1 2014 139 83 3 chr20 29350912 29351249 -42802633 - THE1B LTR MaLR 0 364 1 336 127 0 0 chr20 29351349 29351404 -42802478 + (TG)n Simple_repeat Simple_repeat 2 56 0 202 143 29 0 chr20 29351404 29351439 -42802443 + GA-rich Low_complexity Low_complexity 2 37 0 692 172 119 0 chr20 29351524 29351675 -42802207 + L1MB2 LINE L1 6001 6169 -2 30 0 0 0 chr20 29352614 29352644 -42801238 + AT_rich Low_complexity Low_complexity 1 30 0 1045 193 83 90 chr20 29353199 29353634 -42800248 - MSTB1 LTR MaLR 0 432 1 683 256 90 72 chr20 29354268 29354713 -42799169 + LTR37B LTR ERV1 6 458 -10 2696 177 62 10 chr20 29355716 29356235 -42797647 + LTR64 LTR ERVK 1 546 -12 355 252 305 9 chr20 29357084 29357425 -42796457 - L2 LINE L2 -1111 2203 1762 1255 223 46 64 chr20 29357425 29357878 -42796004 + LTR56 LTR ERV1 1 445 0 2438 91 0 0 chr20 29358508 29358815 -42795067 - AluY SINE Alu -4 307 1 431 250 176 0 chr20 29359097 29359245 -42794637 + MER5A DNA MER1_type 16 189 0 21 36 0 0 chr20 29360010 29360038 -42793844 + AT_rich Low_complexity Low_complexity 1 28 0 268 219 14 14 chr20 29360579 29360652 -42793230 + (TA)n Simple_repeat Simple_repeat 2 74 0 523 273 123 55 chr20 29360711 29360959 -42792923 + LTR33 LTR ERVL 58 348 -173 1183 224 89 63 chr20 29360959 29361451 -42792431 + MLT1D LTR MaLR 1 505 0 523 273 123 55 chr20 29361451 29361624 -42792258 + LTR33 LTR ERVL 348 508 -13 267 54 0 0 chr20 29364398 29364435 -42789447 + (CAAT)n Simple_repeat Simple_repeat 2 38 0 536 198 11 82 chr20 29364939 29365121 -42788761 - MLT1D LTR MaLR -229 276 108 303 287 0 21 chr20 29365484 29365578 -42788304 + L1M4 LINE L1 4114 4205 -1941 1838 188 20 0 chr20 29366440 29366781 -42787101 + MER7A DNA MER2_type 1 346 0 338 143 16 0 chr20 29366870 29366933 -42786949 + CT-rich Low_complexity Low_complexity 1 64 0 889 129 0 14 chr20 29367616 29367755 -42786127 + LTR7 LTR ERV1 1 137 -313 889 141 13 19 chr20 29368013 29368169 -42785713 + LTR7 LTR ERV1 296 450 0 775 167 0 0 chr20 29369056 29369176 -42784706 + FLAM_C SINE Alu 2 121 -22 303 28 0 0 chr20 29369176 29369212 -42784670 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 448 256 94 70 chr20 29369216 29369666 -42784216 - L1MC/D LINE L1 -2053 5755 5291 1867 86 89 0 chr20 29369666 29369935 -42783947 + AluSp SINE Alu 2 294 -19 448 256 94 70 chr20 29369935 29369973 -42783909 - L1MC/D LINE L1 -2517 5291 5255 3036 210 23 30 chr20 29370008 29370745 -42783137 + L1MB8 LINE L1 5447 6178 0 202 289 87 19 chr20 29373608 29373712 -42780170 + MIR SINE MIR 103 213 -49 1153 173 62 159 chr20 29373713 29374083 -42779799 - MER21B LTR ERV1 -528 335 2 5333 130 39 16 chr20 29374525 29374836 -42779046 - MER4D LTR ERV1 0 903 601 1801 134 7 14 chr20 29374836 29375149 -42778733 + AluSp SINE Alu 1 311 0 5333 130 39 16 chr20 29375149 29375719 -42778163 - MER4D LTR ERV1 -302 601 1 1096 272 149 57 chr20 29376067 29376582 -42777300 + L1MC4 LINE L1 7095 7682 -360 2992 208 23 54 chr20 29376582 29377327 -42776555 - MER72 LTR ERV1 0 722 1 1096 272 149 57 chr20 29377327 29377457 -42776425 + L1MC4 LINE L1 7682 7799 -243 349 167 45 0 chr20 29378524 29378590 -42775292 + MER58B DNA MER1_type 256 324 -17 984 176 21 34 chr20 29378633 29378872 -42775010 - L1MA9 LINE L1 -6 6306 6071 514 231 29 26 chr20 29379026 29379159 -42774723 - MIR SINE MIR -35 173 43 1370 158 61 65 chr20 29379159 29379469 -42774413 + AluJo SINE Alu 1 309 -3 514 231 29 26 chr20 29379469 29379502 -42774380 - MIR SINE MIR -165 43 12 1988 107 0 49 chr20 29379746 29380072 -42773810 - AluY SINE Alu -1 310 1 973 226 24 9 chr20 29380129 29380341 -42773541 + MER20 DNA MER1_type 1 215 -4 268 284 191 43 chr20 29380638 29380755 -42773127 - L1MC/D LINE L1 -2008 5800 5702 2007 190 72 71 chr20 29380755 29381307 -42772575 + MLT2B3 LTR ERVL 1 553 -1 268 284 191 43 chr20 29381307 29381492 -42772390 - L1MC/D LINE L1 -2106 5702 5453 460 302 43 62 chr20 29381578 29381677 -42772205 - L1MC/D LINE L1 -811 5335 5236 3229 76 20 20 chr20 29381677 29382125 -42771757 - LTR7 LTR ERV1 -2 448 1 460 302 43 62 chr20 29382125 29382283 -42771599 - L1MC/D LINE L1 -910 5236 5083 1885 151 98 64 chr20 29382324 29382761 -42771121 - LTR10A LTR ERV1 -61 548 97 378 296 7 7 chr20 29383385 29383520 -42770362 - L1ME3 LINE L1 -213 5949 5815 1058 234 29 4 chr20 29383558 29383831 -42770051 - L1MA9 LINE L1 -38 6274 5995 423 141 0 39 chr20 29383848 29383926 -42769956 + L1MA9 LINE L1 5867 5941 -371 399 321 15 0 chr20 29383932 29384063 -42769819 - L1ME3 LINE L1 -342 5828 5696 14340 137 22 33 chr20 29384065 29386508 -42767374 - Tigger1 DNA MER2_type 0 2418 1 241 147 0 0 chr20 29386535 29386569 -42767313 - L1M3 LINE L1 -530 5653 5620 489 192 182 49 chr20 29386585 29386795 -42767087 - MLT1E1 LTR MaLR -361 293 1 23 0 0 0 chr20 29386835 29386858 -42767024 + AT_rich Low_complexity Low_complexity 1 23 0 3717 195 159 20 chr20 29387821 29388839 -42765043 - MER52A LTR ERV1 0 1278 1 204 184 0 0 chr20 29388845 29388894 -42764988 + (CA)n Simple_repeat Simple_repeat 2 50 0 260 288 0 14 chr20 29388963 29389036 -42764846 - MLT1G LTR MaLR -195 395 324 579 257 9 0 chr20 29389093 29389206 -42764676 + MER81 DNA DNA 1 114 0 253 213 288 0 chr20 29389208 29389288 -42764594 - MLT1G LTR MaLR -317 273 171 3452 118 14 10 chr20 29389502 29390012 -42763870 - MER41E LTR ERV1 0 512 1 24 53 0 0 chr20 29390359 29390397 -42763485 + AT_rich Low_complexity Low_complexity 1 38 0 2124 120 0 0 chr20 29390866 29391165 -42762717 + AluSx SINE Alu 1 299 -13 318 320 7 65 chr20 29391265 29391418 -42762464 - L1MC4 LINE L1 -1 8041 7898 3132 201 82 36 chr20 29391420 29392215 -42761667 - L1MA9 LINE L1 -30 6282 5452 327 308 56 0 chr20 29392503 29392610 -42761272 - LTR33 LTR ERVL -332 189 77 227 303 30 0 chr20 29392623 29392689 -42761193 - LTR33 LTR ERVL -378 143 76 * 256 246 31 0 chr20 29392663 29392728 -42761154 - LTR33 LTR ERVL -379 142 76 231 250 47 0 chr20 29392779 29392843 -42761039 - LTR33 LTR ERVL -379 142 76 252 170 0 0 chr20 29392952 29392999 -42760883 - LTR33 LTR ERVL -399 122 76 414 304 36 0 chr20 29393011 29393149 -42760733 - LTR33 LTR ERVL -378 143 1 231 262 208 50 chr20 29393149 29393351 -42760531 - L2 LINE L2 -655 2659 2426 21 36 0 0 chr20 29393591 29393619 -42760263 + AT_rich Low_complexity Low_complexity 1 28 0 794 322 110 20 chr20 29393636 29394127 -42759755 - L1ME4a LINE L1 -30 6091 5557 201 237 0 0 chr20 29395696 29395755 -42758127 + (TG)n Simple_repeat Simple_repeat 1 59 0 1066 269 168 27 chr20 29395767 29396242 -42757640 - MLT1F LTR MaLR 0 542 1 757 291 165 6 chr20 29396507 29396858 -42757024 + LTR16C LTR ERVL 79 485 -6 1578 212 9 12 chr20 29396948 29397287 -42756595 - MER4D LTR ERV1 -2 901 564 762 179 13 19 chr20 29397290 29397467 -42756415 - MER4E LTR ERV1 -588 284 1 1008 177 172 35 chr20 29398238 29398436 -42755446 + MSTD LTR MaLR 141 396 0 547 215 164 18 chr20 29400060 29400279 -42753603 - LTR16C LTR ERVL -9 482 232 690 291 9 26 chr20 29400340 29400567 -42753315 + MER58A DNA MER1_type 2 224 0 228 172 0 0 chr20 29403311 29403369 -42750513 + CT-rich Low_complexity Low_complexity 2 59 0 251 315 33 0 chr20 29404369 29404461 -42749421 - LTR16C LTR ERVL -18 473 379 414 138 64 11 chr20 29406430 29406524 -42747358 - L1MB2 LINE L1 -3 6168 6070 1664 161 0 22 chr20 29407100 29407411 -42746471 + AluJo SINE Alu 1 304 -8 4198 123 55 20 chr20 29407445 29408158 -42745724 - L1PA16 LINE L1 0 6166 5429 * 10778 186 7 8 chr20 29408154 29411026 -42742856 - L1PA15 LINE L1 -2 6163 3281 5144 227 34 5 chr20 29410554 29412190 -42741692 - L1 LINE L1 -2393 3753 1998 4360 257 104 31 chr20 29412177 29413251 -42740631 - L1 LINE L1 -3052 4054 3060 * 2594 74 0 0 chr20 29413251 29413560 -42740322 - AluY SINE Alu -2 309 1 4360 257 104 31 chr20 29413560 29413772 -42740110 - L1 LINE L1 -4046 3060 2865 1947 152 39 36 chr20 29413772 29414108 -42739774 + MER1B DNA MER1_type 1 337 0 4360 257 104 31 chr20 29414108 29414300 -42739582 - L1 LINE L1 -4241 2865 2689 1191 112 0 0 chr20 29414300 29414479 -42739403 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 4360 257 104 31 chr20 29414479 29414511 -42739371 - L1 LINE L1 -4417 2689 2661 1821 121 67 20 chr20 29414511 29414809 -42739073 - AluSq SINE Alu -1 312 1 4360 257 104 31 chr20 29414809 29417297 -42736585 - L1 LINE L1 -4445 2661 1 229 100 80 60 chr20 29418794 29418844 -42735038 - LTR35 LTR ERV1 -41 577 527 2030 123 0 14 chr20 29419975 29420283 -42733599 + AluSg SINE Alu 1 304 0 2265 107 3 3 chr20 29420599 29420899 -42732983 + AluSg SINE Alu 1 300 -10 1945 120 20 20 chr20 29423383 29423682 -42730200 - AluSx SINE Alu -13 299 1 468 290 30 0 chr20 29424122 29424253 -42729629 + L1M4 LINE L1 655 789 -5753 742 237 22 13 chr20 29424302 29424526 -42729356 + L1M4 LINE L1 883 1108 -5434 * 11960 201 35 36 chr20 29424525 29427379 -42726503 - L1 LINE L1 -963 6602 3745 2448 100 0 0 chr20 29427379 29427689 -42726193 - AluY SINE Alu -1 310 1 11960 201 35 36 chr20 29427689 29428863 -42725019 - L1 LINE L1 -3820 3745 2572 13419 192 59 66 chr20 29428873 29433746 -42720136 - L1PB1 LINE L1 -3 6864 2054 3138 130 2 4 chr20 29433746 29434229 -42719653 - L1PB1 LINE L1 -8 6143 5662 13419 192 59 66 chr20 29434229 29436263 -42717619 - L1PB1 LINE L1 -4813 2054 6 1912 109 0 0 chr20 29436358 29436623 -42717259 - L1PA8 LINE L1 0 6172 5908 695 209 16 16 chr20 29436635 29436817 -42717065 - L1M4 LINE L1 -846 5300 5119 248 315 63 0 chr20 29438133 29438276 -42715606 - MER112 DNA MER1_type -99 161 10 740 282 13 26 chr20 29440470 29440697 -42713185 - MER58A DNA MER1_type 0 224 1 594 239 115 21 chr20 29440904 29441147 -42712735 + LTR16C LTR ERVL 225 490 -1 43947 29 25 1 chr20 29442680 29448683 -42705199 + L1PA2 LINE L1 8 6155 0 340 263 114 70 chr20 29448986 29449214 -42704668 - MER57A LTR ERV1 0 403 166 486 277 58 29 chr20 29449232 29449438 -42704444 - MER93a LTR ERV1 -190 212 1 1491 329 45 30 chr20 29449442 29450309 -42703573 - MER31-int LTR ERV1 -425 7112 6233 1077 248 62 99 chr20 29450724 29451746 -42702136 - MER31-int LTR ERV1 -780 6199 2143 525 259 35 15 chr20 29451736 29451937 -42701945 - MER31-int LTR ERV1 -1987 2949 2745 * 201 171 0 0 chr20 29451937 29451972 -42701910 + A-rich Low_complexity Low_complexity 1 35 0 910 254 74 74 chr20 29451973 29452737 -42701145 - MER31-int LTR ERV1 -1698 3182 2371 420 274 19 17 chr20 29453273 29453479 -42700403 - MER57A LTR ERV1 0 403 198 446 271 26 13 chr20 29453530 29453685 -42700197 - MER5A DNA MER1_type -11 178 22 467 301 85 20 chr20 29453688 29453887 -42699995 - MER93a LTR ERV1 -190 212 1 241 279 27 18 chr20 29454372 29454483 -42699399 + MER5A DNA MER1_type 10 121 -68 746 260 32 9 chr20 29454964 29455183 -42698699 + MER58A DNA MER1_type 1 224 0 183 250 21 0 chr20 29457810 29457858 -42696024 - L2 LINE L2 -502 2812 2764 477 115 0 0 chr20 29458530 29458617 -42695265 + (TC)n Simple_repeat Simple_repeat 2 88 0 458 292 24 12 chr20 29460314 29460482 -42693400 - MER5A DNA MER1_type -11 178 9 566 152 0 11 chr20 29462870 29462962 -42690920 - AluJo SINE Alu -178 134 44 245 160 20 0 chr20 29463007 29463057 -42690825 - MLT1J LTR MaLR -38 473 423 181 250 141 0 chr20 29463080 29463144 -42690738 - MIR SINE MIR -14 248 176 866 157 0 8 chr20 29463653 29463787 -42690095 - FLAM_C SINE Alu 0 133 1 328 308 113 32 chr20 29463787 29464000 -42689882 - L1M4 LINE L1 -956 5190 4957 301 392 38 12 chr20 29464774 29465014 -42688868 + MIR SINE MIR 13 258 -4 27 29 0 0 chr20 29466626 29466660 -42687222 + AT_rich Low_complexity Low_complexity 1 34 0 252 86 0 0 chr20 29467138 29467173 -42686709 + (CA)n Simple_repeat Simple_repeat 1 35 0 291 306 67 60 chr20 29467477 29467611 -42686271 - MER5B DNA MER1_type 0 178 44 3146 142 45 7 chr20 29468151 29468708 -42685174 - L1MB3 LINE L1 -11 6172 5595 36115 90 12 11 chr20 29468709 29474839 -42679043 - L1PA6 LINE L1 -8 6146 10 1442 196 78 17 chr20 29474847 29475255 -42678627 - L1MB3 LINE L1 -569 5614 5182 647 117 29 0 chr20 29475286 29475389 -42678493 + MSTA LTR MaLR 1 106 -322 4829 85 29 13 chr20 29475401 29476086 -42677796 - L1PA10 LINE L1 -2 6166 5471 285 324 48 21 chr20 29476218 29476363 -42677519 + MLT1J LTR MaLR 31 179 -332 1507 203 83 3 chr20 29476625 29476965 -42676917 + MLT2C1 LTR ERVL 1 480 -40 236 133 0 0 chr20 29476946 29476991 -42676891 - LTR66 LTR ERVL -172 438 394 * 185 204 31 10 chr20 29477008 29477106 -42676776 + (TA)n Simple_repeat Simple_repeat 2 101 0 276 123 0 173 chr20 29477117 29477198 -42676684 + MLT2B2 LTR ERVL 454 515 0 1997 148 43 32 chr20 29477198 29477569 -42676313 - THE1C LTR MaLR 0 375 1 1435 143 4 8 chr20 29477771 29478030 -42675852 + L1MA4A LINE L1 5866 6123 -180 467 183 0 11 chr20 29478033 29478126 -42675756 + L1MA4A LINE L1 6189 6280 -23 1030 53 26 0 chr20 29478155 29478307 -42675575 + (GAAA)n Simple_repeat Simple_repeat 3 158 0 562 263 104 15 chr20 29478658 29478917 -42674965 - LTR43 LTR ERV1 -124 478 197 325 263 12 0 chr20 29479719 29479799 -42674083 - LTR64 LTR ERVK -477 81 1 688 200 30 0 chr20 29479799 29479934 -42673948 - MER5A DNA MER1_type -43 146 8 2933 200 61 39 chr20 29480385 29481262 -42672620 - L1MB8 LINE L1 0 6178 5282 475 188 62 12 chr20 29481313 29481473 -42672409 - L1MB8 LINE L1 -825 5321 5154 825 188 50 12 chr20 29482097 29482257 -42671625 - FRAM SINE Alu -11 165 1 344 293 77 75 chr20 29482266 29482642 -42671240 - MLT1K LTR MaLR -172 416 40 223 283 151 26 chr20 29483487 29483639 -42670243 - MER5B DNA MER1_type 0 178 8 1078 171 182 4 chr20 29484673 29484997 -42668885 + LTR47A LTR ERVL 17 452 0 398 346 6 0 chr20 29488352 29488531 -42665351 + (CA)n Simple_repeat Simple_repeat 1 180 0 225 0 0 0 chr20 29488554 29488579 -42665303 + (CA)n Simple_repeat Simple_repeat 1 25 0 219 335 18 49 chr20 29489340 29489504 -42664378 + MIR3 SINE MIR 17 175 -33 572 278 56 56 chr20 29490231 29490555 -42663327 + L1MC4 LINE L1 7719 8042 0 310 305 36 18 chr20 29491374 29491541 -42662341 + (CCCCG)n Simple_repeat Simple_repeat 3 172 0 370 174 12 43 chr20 29491553 29491714 -42662168 + C-rich Low_complexity Low_complexity 3 158 0 223 326 6 34 chr20 29491727 29491905 -42661977 + C-rich Low_complexity Low_complexity 5 177 0 * 251 299 23 40 chr20 29491876 29492050 -42661832 + CT-rich Low_complexity Low_complexity 1 171 0 * 394 318 6 17 chr20 29491935 29492114 -42661768 + C-rich Low_complexity Low_complexity 1 177 0 989 235 76 17 chr20 29492555 29492857 -42661025 - MER33 DNA MER1_type -4 320 1 241 248 161 13 chr20 29492987 29493136 -42660746 - L2 LINE L2 -296 3017 2847 394 272 145 61 chr20 29493351 29493579 -42660303 - L1ME2 LINE L1 -11 6153 5907 924 213 25 33 chr20 29496088 29496332 -42657550 + MER31B LTR ERV1 225 466 0 327 299 17 82 chr20 29496518 29496749 -42657133 - L1MC4 LINE L1 -1 8041 7826 720 273 73 26 chr20 29496793 29497110 -42656772 - L1ME2 LINE L1 -16 6148 5817 424 336 0 0 chr20 29497520 29497654 -42656228 + (TG)n Simple_repeat Simple_repeat 1 134 0 324 280 117 43 chr20 29497656 29497981 -42655901 - L1ME4a LINE L1 -153 5968 5620 824 295 147 22 chr20 29498507 29499012 -42654870 + L2 LINE L2 2177 2744 -570 413 189 142 9 chr20 29499015 29499121 -42654761 + MER3 DNA MER1_type 76 195 -14 535 251 210 6 chr20 29499136 29499370 -42654512 + L2 LINE L2 2743 3034 -279 525 170 36 0 chr20 29499830 29499942 -42653940 - L1MCa LINE L1 -4481 1945 1830 1841 184 3 13 chr20 29500192 29500496 -42653386 - AluJb SINE Alu -11 301 1 1106 276 3 15 chr20 29500547 29500886 -42652996 + MLT2C1 LTR ERVL 4 338 -59 4218 127 7 25 chr20 29500886 29501288 -42652594 - Tigger1 DNA MER2_type -1 2417 2031 2188 99 0 59 chr20 29501288 29501612 -42652270 + AluSx SINE Alu 1 305 -7 4218 127 7 25 chr20 29501612 29501904 -42651978 - Tigger1 DNA MER2_type -387 2031 1735 2480 116 26 3 chr20 29502019 29502408 -42651474 - L1PB3 LINE L1 -47 6107 5710 9938 134 29 24 chr20 29502408 29503474 -42650408 - Tigger1 DNA MER2_type -675 1743 683 1860 171 14 3 chr20 29503474 29503761 -42650121 - AluJo SINE Alu -22 290 1 9938 134 29 24 chr20 29503761 29504026 -42649856 - Tigger1 DNA MER2_type -1735 683 421 2158 137 3 10 chr20 29504026 29504340 -42649542 - AluSx SINE Alu 0 312 1 9938 134 29 24 chr20 29504340 29504718 -42649164 - Tigger1 DNA MER2_type -1997 421 25 312 207 11 103 chr20 29504872 29504959 -42648923 - L1MCa LINE L1 -4342 2084 2006 1218 249 52 75 chr20 29504964 29505037 -42648845 - L1MC4 LINE L1 -156 7886 7813 2194 101 0 41 chr20 29505037 29505355 -42648527 + AluSq SINE Alu 6 310 -3 1218 249 52 75 chr20 29505355 29505976 -42647906 - L1MC4 LINE L1 -229 7813 7208 1497 126 45 14 chr20 29506563 29506786 -42647096 - AluSx SINE Alu -24 288 59 251 291 126 20 chr20 29506981 29507132 -42646750 - MER5B DNA MER1_type -1 177 11 215 283 200 22 chr20 29508040 29508220 -42645662 - MIR SINE MIR -3 259 48 429 147 74 0 chr20 29509827 29509922 -42643960 - MER5A DNA MER1_type -79 110 9 900 151 4 0 chr20 29511928 29512025 -42641857 + (CA)n Simple_repeat Simple_repeat 1 96 -767 4986 81 11 12 chr20 29512025 29512692 -42641190 - PABL_B LTR ERV1 -1 666 1 900 151 4 0 chr20 29512692 29512788 -42641094 + (CA)n Simple_repeat Simple_repeat 96 863 0 2418 134 61 30 chr20 29512788 29513300 -42640582 - MLT2A2 LTR ERVL 0 554 1 822 200 0 0 chr20 29513300 29513622 -42640260 + (CA)n Simple_repeat Simple_repeat 1 322 0 2112 160 77 3 chr20 29514107 29514495 -42639387 - LTR23 LTR ERV1 -10 427 11 607 172 147 0 chr20 29514985 29515142 -42638740 - LTR54 LTR ERV1 0 510 331 1599 184 0 3 chr20 29515232 29515520 -42638362 - AluJb SINE Alu -18 294 8 193 369 10 19 chr20 29516289 29516392 -42637490 + MIR3 SINE MIR 106 207 -1 22 0 0 0 chr20 29516943 29516965 -42636917 + AT_rich Low_complexity Low_complexity 1 22 0 775 174 26 118 chr20 29516975 29517245 -42636637 + L1MC4 LINE L1 6914 7158 -884 3157 268 117 35 chr20 29517278 29518507 -42635375 - L1MD3 LINE L1 -6 8036 6676 801 230 95 0 chr20 29518507 29518707 -42635175 + MER20 DNA MER1_type 1 219 0 3157 268 117 35 chr20 29518707 29518950 -42634932 - L1MD3 LINE L1 -1366 6676 6454 183 239 239 22 chr20 29519816 29519908 -42633974 + L2 LINE L2 3202 3313 0 217 366 18 9 chr20 29520682 29520794 -42633088 - L2 LINE L2 -252 3061 2949 531 332 64 31 chr20 29520843 29521328 -42632554 - L2 LINE L2 -443 2871 2371 211 275 6 18 chr20 29522705 29522876 -42631006 + (CACCAT)n Simple_repeat Simple_repeat 5 173 0 728 193 18 0 chr20 29522896 29523067 -42630815 + (CACCAT)n Simple_repeat Simple_repeat 1 174 0 440 260 6 0 chr20 29523085 29523258 -42630624 + (CAT)n Simple_repeat Simple_repeat 1 174 0 380 248 0 14 chr20 29523293 29523438 -42630444 + (CACCAT)n Simple_repeat Simple_repeat 1 143 0 212 197 0 28 chr20 29523459 29523530 -42630352 + (CACCAT)n Simple_repeat Simple_repeat 4 72 0 193 356 0 22 chr20 29524202 29524292 -42629590 + L2 LINE L2 3099 3186 -86 640 222 62 12 chr20 29524384 29524546 -42629336 - MIR SINE MIR -59 203 34 628 277 48 19 chr20 29524835 29525041 -42628841 - LTR16C LTR ERVL 0 491 280 204 357 135 11 chr20 29525211 29525396 -42628486 + L2 LINE L2 3044 3251 -21 240 35 0 0 chr20 29525920 29525949 -42627933 + (TA)n Simple_repeat Simple_repeat 1 29 0 1856 124 10 28 chr20 29525949 29526239 -42627643 - AluSx SINE Alu -17 295 11 717 279 113 40 chr20 29526428 29526808 -42627074 + MLT1I LTR MaLR 1 408 -1 454 249 46 55 chr20 29527512 29527749 -42626133 - LTR56 LTR ERV1 -21 424 190 21 0 0 0 chr20 29527749 29527770 -42626112 + AT_rich Low_complexity Low_complexity 1 21 0 3164 171 23 13 chr20 29527775 29528389 -42625493 - L1PB4 LINE L1 -1 6858 6239 1527 185 0 20 chr20 29528391 29528694 -42625188 - AluJo SINE Alu -15 297 1 11311 224 27 11 chr20 29528695 29531767 -42622115 - L1PB4 LINE L1 -667 6192 3075 4047 274 29 73 chr20 29531763 29533946 -42619936 - L1PB4 LINE L1 -4586 2263 616 * 2651 250 32 44 chr20 29533989 29534673 -42619209 - L1P LINE L1 -3325 2821 2152 1995 114 0 4 chr20 29534673 29534977 -42618905 - AluSg SINE Alu 0 303 1 2651 250 32 44 chr20 29534977 29535304 -42618578 - L1P LINE L1 -3994 2152 1822 308 308 8 17 chr20 29535304 29535424 -42618458 + MER69 DNA AcHobo 593 711 -1815 615 300 106 26 chr20 29535461 29535811 -42618071 + MER69 DNA AcHobo 697 1074 -1452 * 686 193 41 150 chr20 29535806 29536246 -42617636 + MER69 DNA AcHobo 1938 2329 -197 1502 240 166 17 chr20 29536269 29536848 -42617034 + LTR65 LTR ERV1 3 667 -2 730 272 0 0 chr20 29536850 29537045 -42616837 + MER69 DNA AcHobo 2323 2517 -9 342 0 0 0 chr20 29538447 29538485 -42615397 + (CA)n Simple_repeat Simple_repeat 2 39 0 403 363 0 0 chr20 29540194 29540373 -42613509 + (CA)n Simple_repeat Simple_repeat 1 179 0 335 303 146 19 chr20 29541780 29542041 -42611841 + L1MC4 LINE L1 7482 7775 -267 316 267 12 56 chr20 29542456 29542617 -42611265 + C-rich Low_complexity Low_complexity 6 159 0 823 220 65 45 chr20 29543072 29543381 -42610501 - MER33 DNA MER1_type -4 320 6 246 225 90 27 chr20 29543536 29543647 -42610235 - L2 LINE L2 -344 2970 2853 413 296 69 36 chr20 29543863 29544140 -42609742 - L1ME3 LINE L1 -4 6158 5873 198 0 0 0 chr20 29545072 29545094 -42608788 + (T)n Simple_repeat Simple_repeat 1 22 0 506 271 16 8 chr20 29545542 29545664 -42608218 + FLAM_A SINE Alu 1 123 -19 1110 175 13 94 chr20 29547002 29547310 -42606572 + MER31B LTR ERV1 6 288 -178 3044 100 31 2 chr20 29547310 29547731 -42606151 - HERVK LTR ERVK -6810 433 1 5285 153 20 19 chr20 29547731 29548699 -42605183 - LTR5 LTR ERVK 0 969 1 11089 67 1 39 chr20 29548701 29550278 -42603604 + L1P LINE L1 2849 4365 -1781 1578 108 0 0 chr20 29550278 29550499 -42603383 + L1PA6 LINE L1 5932 6154 0 181 360 56 22 chr20 29552166 29552255 -42601627 + L2 LINE L2 390 481 -2833 1148 248 42 39 chr20 29552338 29553474 -42600408 - L1MC4 LINE L1 -1 8041 6837 632 216 36 0 chr20 29553562 29553701 -42600181 + MER20 DNA MER1_type 1 144 -75 12982 183 126 5 chr20 29553701 29556233 -42597649 + L1PA15-16 LINE L1 1 2837 -4012 189 329 13 0 chr20 29556233 29556309 -42597573 - MIR SINE MIR -79 183 107 627 284 40 99 chr20 29556364 29556786 -42597096 + LTR16A LTR ERVL 47 443 -7 405 0 0 0 chr20 29557654 29557699 -42596183 + (GA)n Simple_repeat Simple_repeat 1 45 0 273 163 0 0 chr20 29557740 29557789 -42596093 + T-rich Low_complexity Low_complexity 1 49 0 1695 162 7 17 chr20 29558516 29558812 -42595070 - AluSq SINE Alu -20 293 1 330 308 90 60 chr20 29559267 29559501 -42594381 - L1MC4 LINE L1 -1869 5939 5699 387 294 35 35 chr20 29559601 29559802 -42594080 + MLT1L LTR MaLR 186 386 -229 2278 299 79 16 chr20 29560156 29561154 -42592728 + MER69 DNA AcHobo 7 1067 -1459 605 245 86 40 chr20 29561207 29561533 -42592349 + MER69 DNA AcHobo 1987 2327 -199 270 177 170 78 chr20 29561566 29561707 -42592175 + LTR65 LTR ERV1 12 165 -504 1089 59 0 0 chr20 29561909 29562045 -42591837 + MER41B LTR ERV1 1 136 -499 * 1350 206 201 10 chr20 29562044 29562447 -42591435 + LTR65 LTR ERV1 151 630 -39 449 216 33 94 chr20 29562478 29562691 -42591191 + MER69 DNA AcHobo 2323 2522 -4 293 349 24 0 chr20 29763214 29763383 -42390499 + (CA)n Simple_repeat Simple_repeat 2 174 0 278 26 26 0 chr20 29763522 29763561 -42390321 + (CA)n Simple_repeat Simple_repeat 2 41 0 189 231 39 0 chr20 29764536 29764588 -42389294 + MIR SINE MIR 88 141 -67 376 311 133 26 chr20 29765149 29765419 -42388463 + L1MC4 LINE L1 7478 7776 -266 339 298 0 41 chr20 29765893 29766014 -42387868 + C-rich Low_complexity Low_complexity 1 116 0 951 253 60 3 chr20 29766469 29766769 -42387113 - MER33 DNA MER1_type -3 321 5 343 215 192 29 chr20 29766902 29767074 -42386808 - L2 LINE L2 -296 3017 2818 361 311 65 36 chr20 29767235 29767512 -42386370 - L1ME3 LINE L1 -9 6153 5869 535 147 29 110 chr20 29768808 29768944 -42384938 + FLAM_A SINE Alu 5 129 -4 1390 208 21 74 chr20 29770224 29770657 -42383225 + MER31B LTR ERV1 6 415 -51 223 287 103 15 chr20 29770703 29770839 -42383043 + L2 LINE L2 2291 2438 -876 266 279 58 12 chr20 29770859 29770945 -42382937 + MIR SINE MIR 94 183 -79 254 305 71 57 chr20 29771043 29771253 -42382629 - MLT1H LTR MaLR -242 307 95 275 193 0 36 chr20 29771353 29771436 -42382446 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 808 220 105 5 chr20 29773231 29773440 -42380442 + MSTA LTR MaLR 1 230 -198 375 364 100 12 chr20 29773452 29774087 -42379795 - L2 LINE L2 -245 3068 2377 2768 168 44 2 chr20 29774187 29774664 -42379218 - LOR1a LTR ERV1 0 497 1 551 165 0 0 chr20 29774665 29774756 -42379126 - LOR1a-int LTR ERV1 -3 8117 8027 * 659 96 11 0 chr20 29774755 29774849 -42379033 - LOR1a-int LTR ERV1 -858 7262 7168 295 222 0 0 chr20 29774849 29774912 -42378970 - MER72 LTR ERV1 -650 72 10 1197 161 5 23 chr20 29774912 29775130 -42378752 - LOR1a-int LTR ERV1 -1077 7043 6830 1922 120 0 0 chr20 29775311 29775585 -42378297 - LOR1a-int LTR ERV1 -4070 4050 3777 504 198 8 25 chr20 29775573 29775694 -42378188 - LOR1a-int LTR ERV1 -2186 4145 4027 * 6862 114 43 6 chr20 29775889 29777028 -42376854 - LOR1a-int LTR ERV1 -4337 3783 2603 934 128 8 0 chr20 29777030 29777163 -42376719 + AluJo SINE Alu 3 136 -176 9384 145 49 38 chr20 29777165 29778136 -42375746 - LOR1a-int LTR ERV1 -5113 2703 1744 2198 116 0 0 chr20 29778136 29778429 -42375453 - AluY SINE Alu -18 293 1 2367 95 0 0 chr20 29778438 29778734 -42375148 - AluSg SINE Alu -14 296 1 9384 145 49 38 chr20 29778734 29780021 -42373861 - LOR1a-int LTR ERV1 -6079 1737 1 2350 162 94 9 chr20 29780021 29780479 -42373403 - LOR1a LTR ERV1 0 497 1 354 263 0 0 chr20 29781382 29781458 -42372424 + MER52A LTR ERV1 1 76 -1679 6742 193 84 22 chr20 29781458 29782938 -42370944 + MER52A LTR ERV1 184 1755 0 209 289 0 40 chr20 29782955 29783031 -42370851 + CT-rich Low_complexity Low_complexity 4 76 0 856 193 17 10 chr20 29783143 29783436 -42370446 + L1 LINE L1 3868 4239 -1907 225 156 0 0 chr20 29783436 29783481 -42370401 + Alu SINE Alu 253 297 -3 1819 134 4 14 chr20 29783481 29783758 -42370124 - AluSg SINE Alu -36 274 1 651 131 0 0 chr20 29783758 29783857 -42370025 - AluSp/q SINE Alu -5 308 210 1254 73 0 0 chr20 29786430 29786581 -42367301 + AluY SINE Alu 155 305 -6 2055 128 7 17 chr20 29786670 29786967 -42366915 - AluSx SINE Alu 0 312 19 1950 155 0 0 chr20 29787014 29787305 -42366577 - AluSg SINE Alu -19 291 1 1910 155 0 7 chr20 29787308 29787612 -42366270 - AluSx SINE Alu -10 302 1 2118 132 3 0 chr20 29787636 29787931 -42365951 + AluSx SINE Alu 13 308 -4 191 377 0 60 chr20 29788025 29788192 -42365690 + MIR3 SINE MIR 16 172 -36 1553 168 64 7 chr20 29788353 29788633 -42365249 + AluJo SINE Alu 1 296 -16 298 199 3 66 chr20 29791427 29791663 -42362219 + (TTA)n Simple_repeat Simple_repeat 1 221 0 2254 125 0 0 chr20 29793008 29793359 -42360523 - AluSx SINE Alu 0 312 1 1095 181 91 4 chr20 29793361 29793615 -42360267 - L1PA16 LINE L1 -10 6156 5881 1201 132 0 0 chr20 29795215 29795374 -42358508 + AluSg SINE Alu 1 159 -151 297 0 0 0 chr20 29795637 29795670 -42358212 + (TTGTG)n Simple_repeat Simple_repeat 2 34 0 1721 194 0 0 chr20 29795677 29795965 -42357917 - AluJo SINE Alu -23 289 2 314 291 143 79 chr20 29796097 29797028 -42356854 + L1M4 LINE L1 2131 3296 -2850 468 224 65 82 chr20 29797219 29797587 -42356295 - MLT1H LTR MaLR -13 536 117 804 203 0 0 chr20 29798351 29798696 -42355186 + (CA)n Simple_repeat Simple_repeat 1 345 0 700 243 116 71 chr20 29799033 29799366 -42354516 + MER34B LTR ERV1 6 374 -191 2230 98 21 0 chr20 29799366 29799652 -42354230 - AluSq SINE Alu -21 292 1 700 243 116 71 chr20 29799652 29799854 -42354028 + MER34B LTR ERV1 374 565 0 265 344 0 0 chr20 29799858 29799954 -42353928 + MER34 LTR ERV1 1 96 -446 555 184 24 8 chr20 29799957 29800082 -42353800 + LTR29 LTR ERV1 137 263 -359 601 267 73 6 chr20 29800084 29800249 -42353633 - MER21B LTR ERV1 -676 187 12 1030 188 105 46 chr20 29800518 29800912 -42352970 + LTR54 LTR ERV1 38 498 0 * 1277 295 66 12 chr20 29800912 29801419 -42352463 - MLT1G1 LTR MaLR -58 537 3 707 283 80 9 chr20 29803029 29803255 -42350627 - MIR SINE MIR -4 258 17 1472 295 114 32 chr20 29803354 29804127 -42349755 + L2 LINE L2 1810 2645 -669 199 277 208 30 chr20 29804171 29804373 -42349509 + MIR SINE MIR 24 261 -1 503 288 216 36 chr20 29804458 29804871 -42349011 + L2 LINE L2 2827 3313 0 281 330 103 21 chr20 29804889 29805083 -42348799 - MIR SINE MIR -22 240 31 537 195 9 0 chr20 29805178 29805291 -42348591 + MER3 DNA MER1_type 96 209 0 1995 192 6 6 chr20 29805368 29805733 -42348149 + MLT1A1 LTR MaLR 1 365 0 256 335 69 5 chr20 29809297 29809485 -42344397 + Charlie7 DNA MER1_type 36 235 -2377 203 152 9 57 chr20 29809525 29809630 -42344252 + (TG)n Simple_repeat Simple_repeat 1 100 0 995 187 77 40 chr20 29809649 29809975 -42343907 + MER31B LTR ERV1 128 465 -1 2221 129 48 10 chr20 29812668 29813063 -42340819 - L1MB3 LINE L1 -2 6181 5772 308 265 198 58 chr20 29814476 29814733 -42339149 + LTR16C LTR ERVL 127 419 -72 3263 85 28 5 chr20 29814802 29815236 -42338646 + MLT2A1 LTR ERVL 1 444 0 11407 66 9 3 chr20 29815236 29816655 -42337227 + HERVL-A1 LTR ERVL 1 1427 -4227 1270 86 15 51 chr20 29816640 29816837 -42337045 + HERVL LTR ERVL 5132 5321 -333 * 306 156 0 0 chr20 29816894 29816939 -42336943 + L1MC4 LINE L1 6659 6703 -1339 309 98 78 0 chr20 29816976 29817027 -42336855 + MLT2A2 LTR ERVL 399 453 0 281 206 31 52 chr20 29817336 29817433 -42336449 + LTR16C LTR ERVL 393 487 -4 251 319 11 11 chr20 29818665 29818759 -42335123 + GA-rich Low_complexity Low_complexity 3 96 0 456 257 117 32 chr20 29819096 29819532 -42334350 - MLT1F LTR MaLR -35 507 1 342 311 113 42 chr20 29820369 29820607 -42333275 - HAL1 LINE L1 -8 2499 2245 334 330 67 45 chr20 29821743 29822010 -42331872 + HAL1 LINE L1 1077 1349 -1158 493 352 86 17 chr20 29822144 29822445 -42331437 - HAL1 LINE L1 -1324 1183 862 31 0 0 0 chr20 29822616 29822647 -42331235 + AT_rich Low_complexity Low_complexity 1 31 0 366 234 81 117 chr20 29822772 29823079 -42330803 + MLT1I LTR MaLR 104 399 -10 320 272 156 21 chr20 29823203 29823486 -42330396 - L1M4 LINE L1 -1302 4844 4524 30 27 0 0 chr20 29824002 29824039 -42329843 + AT_rich Low_complexity Low_complexity 1 37 0 2061 129 0 3 chr20 29824039 29824348 -42329534 - AluSq SINE Alu -5 308 1 2019 194 60 17 chr20 29825379 29825781 -42328101 + MSTB1 LTR MaLR 1 419 -13 251 200 0 0 chr20 29825976 29826026 -42327856 - MLT2B3 LTR ERVL -4 550 501 210 206 199 59 chr20 29826201 29826337 -42327545 - MIR SINE MIR -38 224 70 646 286 93 46 chr20 29827397 29827875 -42326007 + MER101 LTR ERV1 24 445 -29 200 189 0 0 chr20 29828175 29828212 -42325670 + CT-rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr20 29828218 29828239 -42325643 + (TTG)n Simple_repeat Simple_repeat 1 21 0 708 279 138 74 chr20 29828483 29828948 -42324934 + MLT1H LTR MaLR 15 549 0 296 224 0 0 chr20 29829048 29829115 -42324767 - MLT1K LTR MaLR -23 565 499 2444 68 6 0 chr20 29829456 29829767 -42324115 - AluSq SINE Alu 0 313 1 802 324 71 38 chr20 29829770 29830292 -42323590 + LTR67 LTR ERVL 8 546 -11 616 289 158 16 chr20 29830766 29831231 -42322651 - MLT1H1 LTR MaLR -2 565 8 697 258 218 17 chr20 29831282 29831580 -42322302 - LTR16C LTR ERVL 0 491 134 337 289 85 63 chr20 29831841 29832111 -42321771 - MLT1K LTR MaLR -9 579 304 985 264 127 25 chr20 29835327 29835800 -42318082 + L2 LINE L2 368 888 -2426 503 297 0 0 chr20 29836347 29836485 -42317397 + L2 LINE L2 1817 1954 -1360 318 80 0 0 chr20 29836978 29837028 -42316854 + (T)n Simple_repeat Simple_repeat 1 50 0 598 274 193 43 chr20 29837034 29837774 -42316108 + L2 LINE L2 2421 3270 -2 447 284 17 0 chr20 29839051 29839167 -42314715 + MER20B DNA MER1_type 36 153 -630 261 254 0 0 chr20 29839181 29839244 -42314638 - MLT1I LTR MaLR -27 382 320 236 193 129 86 chr20 29839371 29839511 -42314371 - MLT1J LTR MaLR -253 258 113 22 35 0 0 chr20 29840532 29840561 -42313321 + AT_rich Low_complexity Low_complexity 1 29 0 399 299 72 29 chr20 29841011 29841289 -42312593 + LTR16A1 LTR ERVL 168 457 0 723 271 150 12 chr20 29841815 29842342 -42311540 - Charlie7 DNA MER1_type -243 2369 1721 1637 179 6 31 chr20 29842977 29843296 -42310586 - AluJo SINE Alu -1 311 1 288 250 28 0 chr20 29844257 29844329 -42309553 + (CA)n Simple_repeat Simple_repeat 2 75 0 189 325 53 18 chr20 29844527 29844641 -42309241 + L2 LINE L2 3149 3266 -6 277 323 181 0 chr20 29844787 29844942 -42308940 - MIR SINE MIR -19 243 61 471 264 206 18 chr20 29845373 29845649 -42308233 + LTR16C LTR ERVL 154 481 -10 235 200 12 12 chr20 29845936 29846021 -42307861 + CT-rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr20 29846560 29846581 -42307301 + AT_rich Low_complexity Low_complexity 1 21 0 2114 138 47 96 chr20 29846861 29847311 -42306571 - MSTA LTR MaLR 0 428 1 1128 120 0 0 chr20 29849314 29849502 -42304380 - AluY SINE Alu 0 312 125 258 281 10 73 chr20 29950784 29950880 -42203002 + L2 LINE L2 3183 3272 0 4783 109 9 3 chr20 29952436 29953067 -42200815 - MER41B LTR ERV1 0 635 1 245 304 7 82 chr20 29953107 29953242 -42200640 + L2 LINE L2 2943 3067 -205 4225 207 40 26 chr20 29954137 29955880 -42198002 + L1MC3 LINE L1 4457 5403 -743 354 224 0 0 chr20 29955885 29955970 -42197912 + GA-rich Low_complexity Low_complexity 2 86 0 220 341 54 73 chr20 29956427 29956764 -42197118 - L2 LINE L2 -238 3075 2741 210 91 0 0 chr20 29957273 29957306 -42196576 + (TC)n Simple_repeat Simple_repeat 2 34 0 333 270 61 71 chr20 29958021 29958217 -42195665 - MIR SINE MIR 0 262 69 327 243 140 29 chr20 29958344 29958480 -42195402 + MIR SINE MIR 14 164 -98 586 186 32 8 chr20 29958511 29958635 -42195247 + L1MA4A LINE L1 6167 6293 -10 257 291 145 17 chr20 29959794 29959911 -42193971 - MIR3 SINE MIR -65 143 12 4004 234 42 20 chr20 29960564 29962012 -42191870 + L1MB8 LINE L1 11 1515 -5344 3847 203 45 17 chr20 29962003 29963179 -42190703 + L1MB8 LINE L1 5788 6989 0 * 235 370 78 7 chr20 29963713 29963867 -42190015 - MIR3 SINE MIR -14 194 30 252 59 0 0 chr20 29964176 29964210 -42189672 + (CA)n Simple_repeat Simple_repeat 2 35 0 920 130 26 1 chr20 29969286 29969458 -42184424 + L1PA16 LINE L1 5299 5490 -675 295 178 0 0 chr20 29969458 29969503 -42184379 + AluJ/FRAM SINE Alu 229 273 -29 3887 177 14 13 chr20 29969519 29970207 -42183675 + L1PA16 LINE L1 5476 6164 -2 216 86 0 0 chr20 29971174 29971209 -42182673 + (TG)n Simple_repeat Simple_repeat 2 36 0 1188 157 40 0 chr20 29972043 29972241 -42181641 + LTR39 LTR ERV1 1 206 -577 186 43 0 0 chr20 29972423 29972446 -42181436 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2076 18 0 0 chr20 29972507 29972735 -42181147 + AluYa5 SINE Alu 79 306 -5 6748 96 11 1 chr20 29972863 29974691 -42179191 - L1PA11 LINE L1 0 6174 4327 3662 128 7 2 chr20 29974691 29975246 -42178636 + L1PA11 LINE L1 3772 4329 -1817 789 188 34 0 chr20 29975525 29975674 -42178208 + MER5A DNA MER1_type 1 154 -35 381 356 54 79 chr20 29975921 29976611 -42177271 - L2 LINE L2 -7 3265 2584 303 146 0 0 chr20 29977366 29977421 -42176461 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2001 136 69 28 chr20 29977426 29977786 -42176096 + THE1C LTR MaLR 1 375 0 889 177 111 44 chr20 29978110 29978415 -42175467 + MER66A LTR ERV1 97 408 -70 8728 201 93 28 chr20 29978459 29980489 -42173393 + MER66A-int LTR ERV1 3 2164 -4512 6249 212 66 24 chr20 29980482 29981740 -42172142 + MER66A-int LTR ERV1 1701 3531 -3145 * 2076 105 0 11 chr20 29981740 29982066 -42171816 + AluSx SINE Alu 1 323 0 6249 212 66 24 chr20 29982066 29982246 -42171636 + MER66A-int LTR ERV1 3531 3702 -2974 388 267 10 0 chr20 29982236 29982337 -42171545 + MER66A-int LTR ERV1 4060 4161 -2515 * 3379 171 45 71 chr20 29982307 29983210 -42170672 + MER66-int LTR ERV1 2411 4941 -1735 1575 155 69 28 chr20 29983185 29983475 -42170407 + MER66-int LTR ERV1 6366 6667 -9 * 251 309 49 0 chr20 29983605 29983686 -42170196 - L2 LINE L2 0 3272 3188 534 231 38 6 chr20 29983712 29983872 -42170010 - Charlie4 DNA MER1_type -49 1912 1748 407 235 59 47 chr20 29983887 29984057 -42169825 - Charlie4 DNA MER1_type -1766 195 24 728 230 88 13 chr20 29984776 29985002 -42168880 + L2 LINE L2 2336 2578 -736 192 311 108 20 chr20 29985659 29985807 -42168075 + L2 LINE L2 1611 1771 -1543 235 390 7 14 chr20 29986197 29986338 -42167544 + L2 LINE L2 2213 2352 -962 627 258 11 39 chr20 29986858 29987036 -42166846 + MER5B DNA MER1_type 3 175 -3 1150 162 5 68 chr20 29987097 29987340 -42166542 - AluJb SINE Alu 0 312 87 1329 234 20 20 chr20 29987345 29987696 -42166186 + L1MCa LINE L1 1177 1527 -5037 1170 189 16 28 chr20 29987899 29988147 -42165735 - LTR52 LTR ERVL -3 418 174 897 199 9 66 chr20 29988144 29988370 -42165512 - LTR52 LTR ERVL -206 215 3 * 995 256 69 11 chr20 29988372 29988736 -42165146 + L1MCa LINE L1 1640 1982 -4763 15345 143 21 18 chr20 29988736 29991147 -42162735 + Tigger1 DNA MER2_type 1 2418 0 995 256 69 11 chr20 29991147 29991312 -42162570 + L1MCa LINE L1 1982 2393 -4352 597 217 23 19 chr20 29991304 29991504 -42162378 + L1MCa LINE L1 1 163 -5882 * 2716 243 46 38 chr20 29991510 29991855 -42162027 + L1MCa LINE L1 2978 3319 -3245 2460 88 0 0 chr20 29991855 29992161 -42161721 + AluSg SINE Alu 1 306 -4 2716 243 46 38 chr20 29992161 29992687 -42161195 + L1MCa LINE L1 3319 3861 -2703 2363 106 0 0 chr20 29992687 29992999 -42160883 + AluSx SINE Alu 1 312 0 2716 243 46 38 chr20 29992999 29993169 -42160713 + L1MCa LINE L1 3861 4028 -2536 4709 137 16 0 chr20 29993178 29993871 -42160011 - L1PA15 LINE L1 -2 6163 5460 831 220 49 26 chr20 29993871 29994135 -42159747 + L1MCa LINE L1 4831 5100 -1464 359 211 11 0 chr20 29994541 29994636 -42159246 + (TA)n Simple_repeat Simple_repeat 2 97 0 436 320 141 0 chr20 29994966 29995172 -42158710 - MIR SINE MIR -12 250 16 211 232 87 73 chr20 29996327 29996412 -42157470 + MIR SINE MIR 11 97 -111 264 289 22 0 chr20 29996781 29996871 -42157011 + MER94 DNA DNA 1 92 -42 604 84 0 0 chr20 29997542 29997625 -42156257 + MLT2A2 LTR ERVL 371 453 0 4088 93 21 12 chr20 29998003 29998573 -42155309 + L1PA16 LINE L1 5583 6157 -9 337 320 82 17 chr20 29998834 29999065 -42154817 - L1MDa LINE L1 -1724 4816 4571 843 262 35 38 chr20 29999214 29999527 -42154355 - LTR16C LTR ERVL -1 490 179 242 272 25 25 chr20 30001538 30001619 -42152263 + L2 LINE L2 3225 3305 -8 456 267 0 0 chr20 30002595 30002685 -42151197 - MER81 DNA DNA -15 99 10 1080 299 49 13 chr20 30005374 30005762 -42148120 + LTR16C LTR ERVL 89 490 -1 322 228 0 0 chr20 30005941 30005998 -42147884 - MER5A DNA MER1_type -123 66 10 2178 129 7 0 chr20 30006030 30006339 -42147543 - AluSx SINE Alu -1 311 1 557 199 64 0 chr20 30006848 30007004 -42146878 - L1MC5 LINE L1 -520 7441 7276 383 299 126 11 chr20 30007027 30007376 -42146506 - L1MC4a LINE L1 -492 7710 7394 451 291 62 19 chr20 30007453 30007663 -42146219 - L1MC4 LINE L1 -995 7047 6829 615 262 108 112 chr20 30007846 30008889 -42144993 - L1MC4a LINE L1 -1352 6850 5812 229 282 39 0 chr20 30008872 30008950 -42144932 - L1MC4a LINE L1 -2379 4161 4081 * 489 219 0 0 chr20 30009505 30009610 -42144272 - L1MC4a LINE L1 -3778 2762 2658 1129 256 66 13 chr20 30009623 30010251 -42143631 - L1MDa LINE L1 -2146 4394 3603 506 273 53 0 chr20 30010255 30010442 -42143440 - L1MDa LINE L1 -3384 3156 2960 3139 144 86 7 chr20 30010442 30011048 -42142834 - L1 LINE L1 -1107 5039 4386 * 6899 208 61 45 chr20 30011023 30013287 -42140595 - L1MDa LINE L1 -4043 2497 21 233 248 0 57 chr20 30013602 30013684 -42140198 + GA-rich Low_complexity Low_complexity 4 80 -22 2309 128 31 19 chr20 30013684 30014044 -42139838 - THE1B LTR MaLR 0 364 1 233 248 0 57 chr20 30014044 30014066 -42139816 + GA-rich Low_complexity Low_complexity 80 102 0 2309 233 46 61 chr20 30015001 30015734 -42138148 - MER72 LTR ERV1 0 722 1 870 260 66 112 chr20 30016968 30017603 -42136279 - MER77 LTR ERV1 -4 601 79 22 0 0 0 chr20 30018253 30018275 -42135607 + AT_rich Low_complexity Low_complexity 1 22 0 561 234 0 0 chr20 30018670 30018828 -42135054 + (TG)n Simple_repeat Simple_repeat 1 158 0 1710 115 4 0 chr20 30020014 30020267 -42133615 + L1PA13 LINE L1 5907 6160 -3 880 167 160 6 chr20 30020665 30020821 -42133061 + AluSx SINE Alu 2 181 -131 506 132 0 0 chr20 30021053 30021129 -42132753 + AluSg/x SINE Alu 200 275 -37 196 288 55 0 chr20 30022473 30022546 -42131336 + MIR SINE MIR 74 150 -112 255 315 113 35 chr20 30023474 30023820 -42130062 + L1MC/D LINE L1 5534 5906 -1902 590 181 60 23 chr20 30024104 30024203 -42129679 - MER65A LTR ERV1 0 445 338 377 20 20 0 chr20 30024203 30024253 -42129629 + (TG)n Simple_repeat Simple_repeat 2 52 0 590 181 60 23 chr20 30024253 30024286 -42129596 - MER65A LTR ERV1 -107 338 308 35 0 0 0 chr20 30024287 30024322 -42129560 + AT_rich Low_complexity Low_complexity 1 35 0 720 192 123 0 chr20 30024323 30024469 -42129413 - U1 snRNA snRNA -1 164 1 * 1626 158 22 103 chr20 30024459 30024819 -42129063 - MER65A LTR ERV1 -114 331 1 22 0 0 0 chr20 30024836 30024858 -42129024 + AT_rich Low_complexity Low_complexity 1 22 0 623 116 0 0 chr20 30025005 30025091 -42128791 + AluS SINE Alu 3 88 -224 185 180 20 0 chr20 30025889 30025939 -42127943 + G-rich Low_complexity Low_complexity 1 51 0 1102 126 79 0 chr20 30027248 30027438 -42126444 - MSTA-int LTR MaLR -1446 205 1 2183 171 63 19 chr20 30027438 30027848 -42126034 - MSTA LTR MaLR 0 428 1 818 244 111 22 chr20 30027852 30028123 -42125759 + MLT1E1 LTR MaLR 359 653 -1 202 343 67 0 chr20 30028626 30028731 -42125151 + MIR SINE MIR 33 144 -118 447 231 0 0 chr20 30029396 30029556 -42124326 + (TG)n Simple_repeat Simple_repeat 2 161 0 346 373 80 0 chr20 30029617 30029818 -42124064 - MIR SINE MIR -32 230 14 685 263 16 0 chr20 30029823 30030009 -42123873 - MER5A DNA MER1_type 0 189 1 1232 196 93 63 chr20 30030637 30030908 -42122974 - MER31B LTR ERV1 -77 389 102 2291 107 0 10 chr20 30030908 30031218 -42122664 - AluSc SINE Alu -2 307 1 1232 196 93 63 chr20 30031218 30031324 -42122558 - MER31B LTR ERV1 -364 102 1 781 248 118 4 chr20 30032139 30032385 -42121497 - LTR16A LTR ERVL -3 447 174 219 218 113 60 chr20 30032590 30032723 -42121159 + L2 LINE L2 3162 3301 -12 250 221 71 97 chr20 30033747 30033860 -42120022 + L1ME4a LINE L1 5619 5728 -393 292 181 117 32 chr20 30034077 30034171 -42119711 + L1ME4a LINE L1 6001 6102 -19 220 296 102 9 chr20 30035187 30035295 -42118587 + MIR3 SINE MIR 6 123 -85 * 230 310 28 0 chr20 30035291 30035362 -42118520 + MIR SINE MIR 163 235 -27 849 230 10 29 chr20 30036984 30037188 -42116694 + MIR SINE MIR 53 252 -10 1423 171 43 4 chr20 30038025 30038282 -42115600 - AluJo SINE Alu -22 290 24 195 405 53 8 chr20 30038706 30038837 -42115045 - MER5B DNA MER1_type -35 143 7 5104 192 49 11 chr20 30038895 30040404 -42113478 - L1MC1 LINE L1 -6 6327 4756 2972 229 60 25 chr20 30040688 30041038 -42112844 - L1MCa LINE L1 -5004 1041 704 1697 78 181 30 chr20 30041038 30041308 -42112574 - AluY SINE Alu 0 311 1 2972 229 60 25 chr20 30041308 30042008 -42111874 - L1MCa LINE L1 -5341 704 4 * 4106 185 68 41 chr20 30042006 30042957 -42110925 - L1MC3 LINE L1 -293 7492 6516 268 233 38 38 chr20 30042957 30043090 -42110792 + Zaphod DNA AcHobo 837 969 -3062 1048 210 34 128 chr20 30043152 30043418 -42110464 + Zaphod DNA AcHobo 3601 3891 -140 1692 191 0 0 chr20 30043418 30043700 -42110182 + AluJo SINE Alu 7 288 -24 1048 210 34 128 chr20 30043700 30043722 -42110160 + Zaphod DNA AcHobo 3891 3913 -118 198 71 0 0 chr20 30043722 30043750 -42110132 + (CA)n Simple_repeat Simple_repeat 2 29 0 1048 210 34 128 chr20 30043750 30043936 -42109946 + Zaphod DNA AcHobo 3913 4031 0 2058 124 14 0 chr20 30044183 30044474 -42109408 + AluSg SINE Alu 1 295 -15 218 297 69 10 chr20 30044632 30044733 -42109149 + L2 LINE L2 2651 2757 -557 3728 110 22 73 chr20 30045691 30046195 -42107687 + LTR9 LTR ERV1 1 466 -146 2544 74 0 0 chr20 30046195 30046504 -42107378 - AluY SINE Alu 0 311 3 3728 110 22 73 chr20 30046504 30046644 -42107238 + LTR9 LTR ERV1 466 612 0 2282 164 45 108 chr20 30046792 30047456 -42106426 - LTR26E LTR ERV1 0 622 1 33 25 0 0 chr20 30047741 30047781 -42106101 + AT_rich Low_complexity Low_complexity 1 40 0 186 323 0 0 chr20 30049656 30049721 -42104161 - L2 LINE L2 -667 2647 2583 201 222 0 0 chr20 30049978 30050014 -42103868 + (CA)n Simple_repeat Simple_repeat 2 37 0 1843 117 24 87 chr20 30050351 30050684 -42103198 - AluSx SINE Alu 0 312 1 229 246 56 48 chr20 30051240 30051366 -42102516 + MER65A LTR ERV1 1 127 -318 21 0 0 0 chr20 30051415 30051436 -42102446 + AT_rich Low_complexity Low_complexity 1 21 0 1438 222 106 0 chr20 30051865 30052167 -42101715 + Tigger7 DNA MER2_type 11 344 -389 469 213 43 0 chr20 30052184 30052278 -42101604 + Tigger7 DNA MER2_type 2390 2487 0 292 198 58 23 chr20 30052280 30052366 -42101516 - L1MC/D LINE L1 -491 5868 5780 300 232 274 0 chr20 30052921 30053016 -42100866 - MER91C DNA MER1_type 0 140 20 334 242 0 0 chr20 30053329 30053391 -42100491 + Tigger7 DNA MER2_type 2526 2587 0 302 230 62 18 chr20 30053391 30053504 -42100378 - L1MD2 LINE L1 -490 5869 5752 351 262 126 43 chr20 30055888 30056340 -42097542 - MLT1H LTR MaLR -22 533 51 1213 255 152 30 chr20 30058423 30058541 -42095341 + L1MB5 LINE L1 5329 5431 -743 291 71 0 0 chr20 30058541 30058583 -42095299 + (CA)n Simple_repeat Simple_repeat 2 43 0 1213 255 152 30 chr20 30058583 30059194 -42094688 + L1MB5 LINE L1 5431 6166 -8 2425 98 0 16 chr20 30059839 30060157 -42093725 + AluSq SINE Alu 1 313 0 338 312 139 6 chr20 30061881 30062054 -42091828 + L1M4 LINE L1 2972 3167 -2979 599 275 75 15 chr20 30062384 30062584 -42091298 - MIR SINE MIR -23 239 28 998 293 77 35 chr20 30062667 30062798 -42091084 + L1M4 LINE L1 3630 3754 -2392 2201 169 0 3 chr20 30062798 30063147 -42090735 + MER7A DNA MER2_type 1 346 0 998 293 77 35 chr20 30063147 30063990 -42089892 + L1M4 LINE L1 3754 4645 -1501 277 192 34 0 chr20 30064862 30064940 -42088942 - MIR SINE MIR -62 146 100 389 256 10 56 chr20 30065774 30065915 -42087967 + MIR SINE MIR 30 157 -86 339 202 395 0 chr20 30066192 30066311 -42087571 + MER5A DNA MER1_type 17 182 -7 228 275 210 7 chr20 30066342 30066480 -42087402 - MER5B DNA MER1_type -8 170 5 3956 82 37 4 chr20 30066940 30067476 -42086406 + MER41A LTR ERV1 1 554 0 246 270 14 0 chr20 30067714 30067788 -42086094 + (CA)n Simple_repeat Simple_repeat 2 76 0 2040 117 3 3 chr20 30067938 30068316 -42085566 + AluSq SINE Alu 1 378 0 22 0 0 0 chr20 30068539 30068561 -42085321 + AT_rich Low_complexity Low_complexity 1 22 0 3099 128 49 59 chr20 30068570 30069178 -42084704 - MER51C LTR ERV1 0 640 1 198 308 192 33 chr20 30069219 30069339 -42084543 + MIR3 SINE MIR 58 196 -12 302 358 102 6 chr20 30069484 30069660 -42084222 + MIR3 SINE MIR 12 204 -4 238 278 205 60 chr20 30070773 30070924 -42082958 + MER5A DNA MER1_type 17 189 0 635 270 86 17 chr20 30071218 30071451 -42082431 + MIR SINE MIR 14 262 0 227 336 88 16 chr20 30071948 30072073 -42081809 + MIR SINE MIR 59 192 -70 502 280 79 15 chr20 30072750 30073190 -42080692 + MER90 LTR ERV1 71 613 -1 237 371 111 25 chr20 30073258 30073770 -42080112 - L2 LINE L2 -457 2857 2302 198 161 89 36 chr20 30073976 30074032 -42079850 + MIR SINE MIR 90 148 -114 276 77 0 0 chr20 30077828 30077867 -42076015 + (TG)n Simple_repeat Simple_repeat 1 39 0 437 241 37 129 chr20 30077913 30078207 -42075675 + LTR16A1 LTR ERVL 11 277 -180 1388 241 50 37 chr20 30078221 30078682 -42075200 - MLT1H1 LTR MaLR -2 553 87 976 145 48 0 chr20 30078685 30078871 -42075011 + L1PA15 LINE L1 5141 5335 -811 4565 136 23 3 chr20 30078876 30079609 -42074273 + L1PA15 LINE L1 5416 6163 -2 302 247 26 0 chr20 30079610 30079687 -42074195 - MLT1H1 LTR MaLR -486 104 26 509 228 107 0 chr20 30079697 30079846 -42074036 + LTR16A1 LTR ERVL 286 450 -7 2235 160 18 98 chr20 30079974 30080473 -42073409 - LTR32 LTR ERVL 0 471 13 343 261 185 62 chr20 30080472 30080828 -42073054 + MLT1L LTR MaLR 209 608 -7 * 448 287 32 45 chr20 30081541 30081788 -42072094 - LTR16C LTR ERVL 0 491 248 1941 154 92 15 chr20 30081836 30082226 -42071656 + LTR24 LTR ERV1 10 429 -38 4311 177 26 22 chr20 30082265 30083121 -42070761 - MER4D LTR ERV1 -8 895 34 3941 158 6 2 chr20 30083121 30083753 -42070129 - MER41B LTR ERV1 0 635 1 4311 177 26 22 chr20 30083753 30083788 -42070094 - MER4D LTR ERV1 -869 34 1 289 93 0 0 chr20 30083788 30083831 -42070051 + LTR24 LTR ERV1 425 467 0 2753 147 14 0 chr20 30083834 30084256 -42069626 - MSTA LTR MaLR 0 428 1 1078 168 66 168 chr20 30084500 30084987 -42068895 + LTR23 LTR ERV1 1 437 0 384 259 104 80 chr20 30085096 30085308 -42068574 + HAL1 LINE L1 1036 1252 -1255 1242 264 53 24 chr20 30085332 30085782 -42068100 + HAL1 LINE L1 1475 1937 -570 974 223 9 24 chr20 30085816 30086027 -42067855 - MER58A DNA MER1_type -15 209 2 703 264 75 42 chr20 30086056 30086390 -42067492 + HAL1 LINE L1 1991 2335 -172 406 245 159 13 chr20 30086702 30086853 -42067029 + MER115 DNA AcHobo 425 597 -96 300 263 114 9 chr20 30087438 30087552 -42066330 - MIR SINE MIR -51 211 86 622 224 80 40 chr20 30088525 30088726 -42065156 + MER3 DNA MER1_type 1 209 0 254 256 12 12 chr20 30090395 30090481 -42063401 - MER5A DNA MER1_type -78 111 26 882 225 76 45 chr20 30091785 30092140 -42061742 + MLT1B LTR MaLR 1 366 -24 2931 218 156 23 chr20 30093015 30093959 -42059923 - LTR28 LTR ERV1 -4 1016 1 21 36 0 0 chr20 30094315 30094343 -42059539 + AT_rich Low_complexity Low_complexity 1 28 0 217 317 124 35 chr20 30094428 30094630 -42059252 + MIR SINE MIR 32 251 -11 360 303 42 8 chr20 30095013 30095132 -42058750 + MIR SINE MIR 66 188 -74 457 331 104 18 chr20 30096530 30096868 -42057014 + LTR16C LTR ERVL 125 491 0 322 225 162 0 chr20 30097226 30097337 -42056545 - MIR3 SINE MIR -49 159 31 676 157 0 35 chr20 30097426 30097541 -42056341 + FLAM_A SINE Alu 26 136 -6 197 81 0 27 chr20 30098128 30098165 -42055717 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 202 355 74 33 chr20 30098511 30098632 -42055250 - L3 LINE CR1 -6 1571 1446 194 376 68 8 chr20 30098909 30099042 -42054840 - L2 LINE L2 -1995 1319 1179 1116 228 83 32 chr20 30100851 30101280 -42052602 - MLT1G1 LTR MaLR 0 595 1 354 382 73 9 chr20 30102719 30102939 -42050943 + ERVL LTR ERVL 2020 2253 -3511 369 230 106 6 chr20 30104196 30104357 -42049525 + LTR16C LTR ERVL 252 428 -63 182 275 42 120 chr20 30104637 30104779 -42049103 - MIR SINE MIR -21 241 111 207 302 160 35 chr20 30108436 30108605 -42045277 + MIR3 SINE MIR 19 208 0 216 250 0 0 chr20 30108928 30108992 -42044890 + GA-rich Low_complexity Low_complexity 1 64 0 646 283 0 0 chr20 30109721 30109905 -42043977 - L1PB4 LINE L1 -1 6155 5972 1163 218 97 12 chr20 30109917 30110137 -42043745 - L1 LINE L1 -3466 2680 2480 306 0 0 0 chr20 30110137 30110171 -42043711 + (TG)n Simple_repeat Simple_repeat 2 35 0 198 91 0 0 chr20 30110170 30110203 -42043679 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 1163 218 97 12 chr20 30110171 30110312 -42043570 - L1 LINE L1 -3666 2480 2323 481 284 109 0 chr20 30111526 30111709 -42042173 + LTR16A1 LTR ERVL 255 457 0 1099 281 123 20 chr20 30111969 30112524 -42041358 - MER115 DNA AcHobo 0 693 20 360 305 62 0 chr20 30112539 30112667 -42041215 + MIR3 SINE MIR 68 203 -5 14977 144 24 19 chr20 30114269 30116676 -42037206 + Tigger1 DNA MER2_type 1 2418 0 219 250 0 0 chr20 30117691 30117751 -42036131 + A-rich Low_complexity Low_complexity 1 60 0 2686 143 25 33 chr20 30118130 30118619 -42035263 + MER31A LTR ERV1 1 485 0 329 308 38 30 chr20 30119613 30119746 -42034136 + L2 LINE L2 3139 3272 0 965 250 119 84 chr20 30120046 30120734 -42033148 - L1ME3A LINE L1 -1 6169 5458 4880 194 49 22 chr20 30120737 30121493 -42032389 - L1MD1 LINE L1 0 6636 5901 2916 154 35 37 chr20 30121493 30121980 -42031902 + MER66B LTR ERV1 1 486 0 4880 194 49 22 chr20 30121980 30122461 -42031421 - L1MD1 LINE L1 -735 5901 5378 1886 121 4 8 chr20 30122461 30122758 -42031124 - AluSg SINE Alu 0 310 30 4880 194 49 22 chr20 30122758 30122803 -42031079 - L1MD1 LINE L1 -1258 5378 5336 595 270 62 24 chr20 30122804 30123093 -42030789 - L1MD1 LINE L1 -2401 4139 3840 1119 133 0 17 chr20 30123105 30123278 -42030604 - Tigger7 DNA MER2_type -6 2481 2312 5278 230 89 31 chr20 30123308 30125468 -42028414 - L1MD1 LINE L1 -2836 3704 1671 240 86 0 0 chr20 30125468 30125503 -42028379 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5278 230 89 31 chr20 30125503 30126248 -42027634 - L1MD1 LINE L1 -4869 1671 971 2054 199 34 10 chr20 30126248 30126660 -42027222 - L1MB2 LINE L1 -4 6167 5746 5278 230 89 31 chr20 30126660 30126962 -42026920 - L1MD1 LINE L1 -5569 971 2 1506 279 44 17 chr20 30128218 30128744 -42025138 - MLT1H1 LTR MaLR -7 548 9 864 215 42 77 chr20 30129176 30129436 -42024446 - MLT1A2 LTR MaLR -119 255 5 198 71 0 0 chr20 30129493 30129521 -42024361 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 240 114 0 0 chr20 30130771 30130806 -42023076 + MIR SINE MIR 215 249 -13 215 203 279 0 chr20 30131487 30131566 -42022316 + L2 LINE L2 1803 1903 -1411 738 319 93 28 chr20 30131623 30132094 -42021788 + L2 LINE L2 2323 2824 -490 1021 235 86 52 chr20 30132099 30132619 -42021263 + MLT1F LTR MaLR 8 538 -4 766 310 65 36 chr20 30132630 30133017 -42020865 + L2 LINE L2 2862 3259 -54 503 212 82 27 chr20 30133114 30133260 -42020622 + MLT1H1 LTR MaLR 402 555 0 276 29 0 0 chr20 30134550 30134584 -42019298 + AluY SINE Alu 8 41 -262 360 319 43 14 chr20 30134618 30134759 -42019123 - MIR SINE MIR -65 197 53 1834 152 3 3 chr20 30135259 30135569 -42018313 + AluJo SINE Alu 1 310 0 674 211 86 0 chr20 30136424 30136576 -42017306 + MER5B DNA MER1_type 1 165 -13 409 236 32 32 chr20 30136577 30136700 -42017182 - MER5A DNA MER1_type 0 189 67 312 221 258 6 chr20 30136944 30137107 -42016775 - LTR37A LTR ERV1 -2 424 221 231 179 104 0 chr20 30137074 30137141 -42016741 - LTR37B LTR ERV1 -172 296 223 * 1391 112 0 115 chr20 30137322 30137608 -42016274 - AluY SINE Alu -4 307 55 23 33 0 0 chr20 30138028 30138058 -42015824 + AT_rich Low_complexity Low_complexity 1 30 0 3126 178 7 1 chr20 30138241 30138937 -42014945 - L1P4 LINE L1 -719 5446 4747 827 324 82 9 chr20 30138998 30139573 -42014309 - L1M4 LINE L1 -1941 4205 3589 824 285 83 21 chr20 30139745 30140481 -42013401 - L1M4 LINE L1 -3082 3064 2277 3524 207 55 14 chr20 30140500 30141307 -42012575 - L1MC3 LINE L1 -346 7439 6600 368 246 12 12 chr20 30141394 30141561 -42012321 + (TA)n Simple_repeat Simple_repeat 1 167 0 237 183 0 67 chr20 30141581 30141641 -42012241 + L1MC4 LINE L1 6648 6703 -1339 255 350 21 0 chr20 30141648 30141745 -42012137 + (CATA)n Simple_repeat Simple_repeat 3 101 0 1815 239 101 74 chr20 30141745 30142763 -42011119 - L1MC3 LINE L1 -1139 6646 5601 3572 216 33 16 chr20 30142774 30143695 -42010187 - L1MB8 LINE L1 -1 6177 5240 3090 225 16 12 chr20 30143695 30144336 -42009546 - MER82 DNA MER2_type 0 653 11 538 263 48 0 chr20 30144347 30144533 -42009349 - L1MB8 LINE L1 -905 5241 5047 452 191 45 0 chr20 30144539 30144628 -42009254 + MLT2B1 LTR ERVL 425 517 -3 963 256 97 22 chr20 30144652 30144973 -42008909 + ERVL-B1 LTR ERVL 27 371 -5393 805 281 35 17 chr20 30144965 30145196 -42008686 - ERVL LTR ERVL -5192 572 338 * 16347 182 26 11 chr20 30145160 30148068 -42005814 + ERVL LTR ERVL 2122 5074 -690 2990 264 77 6 chr20 30148118 30149238 -42004644 - L1MB8 LINE L1 -2771 3375 2177 2329 106 0 0 chr20 30150257 30150558 -42003324 + AluSc SINE Alu 1 301 -8 322 250 54 36 chr20 30151507 30151619 -42002263 - MLT1J LTR MaLR 0 511 398 396 282 69 0 chr20 30151829 30151960 -42001922 - MLT1J LTR MaLR -369 142 3 2068 135 0 0 chr20 30152619 30152915 -42000967 + AluSg SINE Alu 2 297 -13 1844 189 61 0 chr20 30153002 30153330 -42000552 - MER7A DNA MER2_type 0 346 1 1763 125 64 0 chr20 30154771 30155074 -41998808 - AluSx SINE Alu 0 320 1 737 222 31 46 chr20 30158552 30158746 -41995136 + MLT2B2 LTR ERVL 14 204 -311 631 230 91 0 chr20 30158802 30158967 -41994915 + MLT1H LTR MaLR 3 182 -367 253 289 75 31 chr20 30159643 30159743 -41994139 + MIR SINE MIR 87 198 -64 186 43 0 0 chr20 30159743 30159766 -41994116 + (CATATA)n Simple_repeat Simple_repeat 4 26 0 253 289 75 31 chr20 30159766 30159824 -41994058 + MIR SINE MIR 198 252 -10 210 37 0 0 chr20 30159857 30159884 -41993998 + (CAA)n Simple_repeat Simple_repeat 2 28 0 462 159 0 92 chr20 30160049 30160244 -41993638 + (TG)n Simple_repeat Simple_repeat 2 178 0 358 194 0 67 chr20 30160283 30160672 -41993210 + (TG)n Simple_repeat Simple_repeat 1 362 0 474 151 6 47 chr20 30160715 30160887 -41992995 + (TG)n Simple_repeat Simple_repeat 2 166 0 886 161 12 36 chr20 30162245 30162413 -41991469 - MLT1A1 LTR MaLR 0 365 202 2925 184 94 7 chr20 30162414 30163012 -41990870 - LTR34 LTR ERV1 -1 698 49 402 21 0 0 chr20 30163034 30163081 -41990801 + (TA)n Simple_repeat Simple_repeat 1 47 0 3146 58 5 0 chr20 30163084 30163460 -41990422 - L1PA8 LINE L1 -13 6159 5782 481 248 16 39 chr20 30163579 30163708 -41990174 - MLT1A1 LTR MaLR -302 126 1 455 269 132 55 chr20 30164475 30164802 -41989080 + L1MB4 LINE L1 525 876 -5508 1759 163 118 138 chr20 30164807 30165483 -41988399 - MER4A LTR ERV1 -1 663 1 1483 276 5 5 chr20 30165497 30165928 -41987954 + L1MB4 LINE L1 2535 2965 -3417 2607 184 86 60 chr20 30166006 30166114 -41987768 + MER21A LTR ERV1 12 116 -747 276 30 0 0 chr20 30166114 30166147 -41987735 + (TC)n Simple_repeat Simple_repeat 2 34 0 2607 184 86 60 chr20 30166147 30166809 -41987073 + MER21A LTR ERV1 116 860 -3 279 245 78 0 chr20 30166815 30166917 -41986965 + L1MB4 LINE L1 2959 3068 -3314 5845 181 16 47 chr20 30166929 30167108 -41986774 + L1MC1 LINE L1 185 368 -6058 937 226 146 49 chr20 30167108 30167498 -41986384 + MSTC LTR MaLR 1 428 0 5845 181 16 47 chr20 30167498 30168540 -41985342 + L1MC1 LINE L1 368 1368 -5058 3162 116 22 45 chr20 30168537 30168745 -41985137 + L1P LINE L1 2634 2845 -3301 * 2316 119 0 0 chr20 30168745 30169055 -41984827 + AluSg SINE Alu 1 310 0 3162 116 22 45 chr20 30169055 30169397 -41984485 + L1P LINE L1 2845 3171 -2975 17851 92 10 2 chr20 30169397 30171777 -41982105 - MER57A-int LTR ERV1 -394 7143 4745 5633 148 127 95 chr20 30171780 30173426 -41980456 - pTR5 LTR ERV1 0 2438 741 * 9761 113 57 11 chr20 30173417 30174946 -41978936 - MER57A-int LTR ERV1 -2781 4756 3157 8060 128 15 25 chr20 30174942 30176204 -41977678 - MER57A-int LTR ERV1 -4583 2954 1705 * 8230 141 21 10 chr20 30176198 30177452 -41976430 - MER57A-int LTR ERV1 -6269 1268 1 2410 170 15 5 chr20 30177452 30177851 -41976031 - MER57A LTR ERV1 0 403 1 5885 240 48 18 chr20 30177893 30180130 -41973752 + L1MC1 LINE L1 2051 4357 -2069 1325 231 151 9 chr20 30180134 30180597 -41973285 + L1MC1 LINE L1 4544 5072 -1354 2058 118 0 0 chr20 30180602 30180921 -41972961 + AluSg SINE Alu 1 319 0 6184 152 35 10 chr20 30180921 30182027 -41971855 + L1MC1 LINE L1 5481 6613 0 4659 219 95 25 chr20 30182023 30184264 -41969618 + L1MB4 LINE L1 4011 6415 -1 * 278 337 11 0 chr20 30184704 30184793 -41969089 + MIR SINE MIR 61 150 -112 367 222 76 83 chr20 30185099 30185243 -41968639 + MLT1H LTR MaLR 383 525 -24 817 260 11 6 chr20 30185339 30185520 -41968362 - MER5A DNA MER1_type -6 183 2 192 365 66 12 chr20 30185905 30186072 -41967810 + MIR SINE MIR 81 256 -6 309 74 74 25 chr20 30186299 30186420 -41967462 + (TA)n Simple_repeat Simple_repeat 1 127 0 1289 120 5 11 chr20 30186482 30186666 -41967216 + AluSc SINE Alu 1 183 -126 406 267 54 27 chr20 30186678 30186899 -41966983 + MER69 DNA AcHobo 2101 2327 -199 2190 110 17 0 chr20 30186905 30187205 -41966677 + AluSg SINE Alu 1 305 -5 1072 207 175 35 chr20 30187238 30187643 -41966239 + LTR65 LTR ERV1 3 464 -205 669 234 52 0 chr20 30187723 30187915 -41965967 + MER69 DNA AcHobo 2325 2526 0 365 238 140 61 chr20 30190447 30190540 -41963342 + MER5A DNA MER1_type 10 94 -95 248 0 0 30 chr20 30190540 30190573 -41963309 + (GTGTG)n Simple_repeat Simple_repeat 1 32 0 365 238 140 61 chr20 30190573 30190643 -41963239 + MER5A DNA MER1_type 94 186 -3 490 167 0 0 chr20 30191490 30191574 -41962308 - L1M2 LINE L1 -635 5665 5582 620 83 19 83 chr20 30191574 30191682 -41962200 + L1MA5 LINE L1 6194 6294 -6 1223 154 72 33 chr20 30192075 30192467 -41961415 - LOR1a LTR ERV1 0 497 1 1676 133 23 0 chr20 30192467 30192723 -41961159 - LOR1a-int LTR ERV1 0 8120 7859 1944 148 10 3 chr20 30192754 30193103 -41960779 - LOR1a-int LTR ERV1 -595 6163 3777 417 250 0 26 chr20 30193091 30193207 -41960675 - LOR1a-int LTR ERV1 -2186 4145 4033 * 7609 111 46 26 chr20 30193390 30193509 -41960373 - LOR1a-int LTR ERV1 -4341 3779 3664 4655 122 9 3 chr20 30193509 30194191 -41959691 + L1MA2 LINE L1 5615 6300 -4 7609 111 46 26 chr20 30194191 30195341 -41958541 - LOR1a-int LTR ERV1 -4456 3664 2485 10508 116 17 11 chr20 30195366 30197022 -41956860 - LOR1a-int LTR ERV1 -5931 2189 524 300 176 0 0 chr20 30197052 30197103 -41956779 - 5S rRNA rRNA -70 51 1 1388 144 39 0 chr20 30197193 30197422 -41956460 - LOR1a-int LTR ERV1 -7685 435 198 1817 172 44 28 chr20 30197446 30197807 -41956075 - LOR1a-int LTR ERV1 -7753 367 1 1404 180 27 12 chr20 30197807 30198204 -41955678 - LOR1a LTR ERV1 0 497 3 874 168 0 0 chr20 30198601 30198732 -41955150 - AluSq/x SINE Alu -181 131 1 236 291 171 26 chr20 30198968 30199085 -41954797 - L2 LINE L2 0 3313 3180 221 219 0 0 chr20 30199088 30199129 -41954753 + G-rich Low_complexity Low_complexity 2 42 0 475 282 73 39 chr20 30199311 30199570 -41954312 + MLT1-int LTR MaLR 334 601 -770 236 337 0 0 chr20 30199800 30199886 -41953996 + MLT1-int LTR MaLR 699 784 -587 2203 185 129 11 chr20 30200238 30200681 -41953201 - LTR42 LTR ERVL 0 495 1 1281 224 197 8 chr20 30200954 30201329 -41952553 + MLT1F1 LTR MaLR 122 567 0 181 229 125 0 chr20 30201695 30201743 -41952139 + L2 LINE L2 3204 3257 -56 2602 268 120 26 chr20 30201841 30202924 -41950958 - L1MC4 LINE L1 0 8042 6858 352 233 22 0 chr20 30204147 30204237 -41949645 - MER103 DNA DNA -65 101 10 846 251 55 25 chr20 30204429 30204664 -41949218 + MIR SINE MIR 21 262 0 948 259 71 7 chr20 30204905 30205199 -41948683 - L2 LINE L2 -899 2415 2103 413 252 7 0 chr20 30205985 30206120 -41947762 + (TCCA)n Simple_repeat Simple_repeat 1 136 0 644 237 188 11 chr20 30206294 30206480 -41947402 + MER20 DNA MER1_type 1 219 0 2015 132 0 7 chr20 30206926 30207222 -41946660 - AluSx SINE Alu -11 301 8 207 0 0 0 chr20 30207227 30207250 -41946632 + (T)n Simple_repeat Simple_repeat 1 23 0 2129 137 0 7 chr20 30208030 30208336 -41945546 + AluSp SINE Alu 2 305 -8 2882 154 9 4 chr20 30208381 30208834 -41945048 - MLT2C2 LTR ERVL -7 457 3 23 33 0 0 chr20 30208890 30208920 -41944962 + AT_rich Low_complexity Low_complexity 1 30 0 2331 113 0 0 chr20 30208962 30209273 -41944609 - AluSx SINE Alu -1 311 1 2148 100 28 0 chr20 30209473 30209764 -41944118 + AluSc SINE Alu 1 299 -10 229 302 0 0 chr20 30210570 30210633 -41943249 + (TGGA)n Simple_repeat Simple_repeat 2 64 0 774 162 0 0 chr20 30211402 30211581 -41942301 + (CA)n Simple_repeat Simple_repeat 1 179 0 638 179 5 0 chr20 30211647 30211875 -41942007 + (CA)n Simple_repeat Simple_repeat 1 229 0 288 337 17 22 chr20 30212145 30212323 -41941559 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 * 361 297 29 23 chr20 30212191 30212366 -41941516 + (CAGA)n Simple_repeat Simple_repeat 4 179 0 6356 128 18 18 chr20 30213995 30214964 -41938918 + LTR5 LTR ERVK 1 969 0 203 284 98 20 chr20 30215109 30215211 -41938671 + MIR SINE MIR 37 146 -62 746 186 8 0 chr20 30215248 30215366 -41938516 + AluSq/x SINE Alu 2 120 -193 38 0 0 0 chr20 30215368 30215406 -41938476 + AT_rich Low_complexity Low_complexity 1 38 0 356 274 288 12 chr20 30218235 30218771 -41935111 - L2 LINE L2 0 3313 2584 328 292 127 11 chr20 30218785 30219045 -41934837 - L2 LINE L2 -885 2429 2140 2316 47 9 68 chr20 30219102 30219423 -41934459 + AluY SINE Alu 3 304 -7 1793 141 4 14 chr20 30219423 30219700 -41934182 - AluSg SINE Alu -36 274 1 668 121 0 0 chr20 30219700 30219799 -41934083 - AluSp/q SINE Alu -5 308 210 1254 73 0 0 chr20 30222372 30222523 -41931359 + AluY SINE Alu 155 305 -6 2055 128 7 17 chr20 30222612 30222909 -41930973 - AluSx SINE Alu 0 312 19 1950 155 0 0 chr20 30222956 30223247 -41930635 - AluSg SINE Alu -19 291 1 1910 155 0 7 chr20 30223250 30223554 -41930328 - AluSx SINE Alu -10 302 1 2118 132 3 0 chr20 30223578 30223873 -41930009 + AluSx SINE Alu 13 308 -4 191 377 0 60 chr20 30223967 30224134 -41929748 + MIR3 SINE MIR 16 172 -36 1553 168 64 7 chr20 30224295 30224575 -41929307 + AluJo SINE Alu 1 296 -16 298 199 3 66 chr20 30227369 30227605 -41926277 + (TTA)n Simple_repeat Simple_repeat 1 221 0 2254 125 0 0 chr20 30228950 30229301 -41924581 - AluSx SINE Alu 0 312 1 1095 181 91 4 chr20 30229303 30229557 -41924325 - L1PA16 LINE L1 -10 6156 5881 1201 132 0 0 chr20 30231157 30231316 -41922566 + AluSg SINE Alu 1 159 -151 297 0 0 0 chr20 30231579 30231612 -41922270 + (TTGTG)n Simple_repeat Simple_repeat 2 34 0 1721 194 0 0 chr20 30231619 30231907 -41921975 - AluJo SINE Alu -23 289 2 314 291 143 79 chr20 30232039 30232970 -41920912 + L1M4 LINE L1 2131 3296 -2850 468 224 65 82 chr20 30233161 30233529 -41920353 - MLT1H LTR MaLR -13 536 117 804 203 0 0 chr20 30234293 30234638 -41919244 + (CA)n Simple_repeat Simple_repeat 1 345 0 700 243 116 71 chr20 30234975 30235308 -41918574 + MER34B LTR ERV1 6 374 -191 2230 98 21 0 chr20 30235308 30235594 -41918288 - AluSq SINE Alu -21 292 1 700 243 116 71 chr20 30235594 30235796 -41918086 + MER34B LTR ERV1 374 565 0 265 344 0 0 chr20 30235800 30235896 -41917986 + MER34 LTR ERV1 1 96 -446 555 184 24 8 chr20 30235899 30236024 -41917858 + LTR29 LTR ERV1 137 263 -359 601 267 73 6 chr20 30236026 30236191 -41917691 - MER21B LTR ERV1 -676 187 12 1030 188 105 46 chr20 30236460 30236854 -41917028 + LTR54 LTR ERV1 38 498 0 * 1277 295 66 12 chr20 30236854 30237361 -41916521 - MLT1G1 LTR MaLR -58 537 3 707 283 80 9 chr20 30238971 30239197 -41914685 - MIR SINE MIR -4 258 17 1472 295 114 32 chr20 30239296 30240069 -41913813 + L2 LINE L2 1810 2645 -669 199 277 208 30 chr20 30240113 30240315 -41913567 + MIR SINE MIR 24 261 -1 503 288 216 36 chr20 30240400 30240813 -41913069 + L2 LINE L2 2827 3313 0 281 330 103 21 chr20 30240831 30241025 -41912857 - MIR SINE MIR -22 240 31 537 195 9 0 chr20 30241120 30241233 -41912649 + MER3 DNA MER1_type 96 209 0 1995 192 6 6 chr20 30241310 30241675 -41912207 + MLT1A1 LTR MaLR 1 365 0 256 335 69 5 chr20 30245239 30245427 -41908455 + Charlie7 DNA MER1_type 36 235 -2377 203 152 9 57 chr20 30245467 30245572 -41908310 + (TG)n Simple_repeat Simple_repeat 1 100 0 995 187 77 40 chr20 30245591 30245917 -41907965 + MER31B LTR ERV1 128 465 -1 2221 129 48 10 chr20 30248610 30249005 -41904877 - L1MB3 LINE L1 -2 6181 5772 239 280 187 47 chr20 30250418 30250675 -41903207 + LTR16C LTR ERVL 127 419 -72 3281 85 28 5 chr20 30250744 30251178 -41902704 + MLT2A1 LTR ERVL 1 444 0 10830 66 9 3 chr20 30251178 30252597 -41901285 + HERVL-A1 LTR ERVL 1 1427 -4227 1193 91 15 51 chr20 30252582 30252779 -41901103 + HERVL LTR ERVL 5132 5321 -333 * 306 156 0 0 chr20 30252836 30252881 -41901001 + L1MC4 LINE L1 6659 6703 -1339 294 98 78 0 chr20 30252918 30252969 -41900913 + MLT2A2 LTR ERVL 399 453 0 260 206 31 52 chr20 30253278 30253375 -41900507 + LTR16C LTR ERVL 393 487 -4 251 319 11 11 chr20 30254607 30254701 -41899181 + GA-rich Low_complexity Low_complexity 3 96 0 402 269 119 25 chr20 30255038 30255474 -41898408 - MLT1F LTR MaLR -35 507 1 354 311 113 42 chr20 30256311 30256549 -41897333 - HAL1 LINE L1 -8 2499 2245 348 252 97 103 chr20 30257605 30257952 -41895930 + L1ME LINE L1 683 1283 -1158 510 352 86 17 chr20 30258086 30258387 -41895495 - HAL1 LINE L1 -1324 1183 862 31 0 0 0 chr20 30258558 30258589 -41895293 + AT_rich Low_complexity Low_complexity 1 31 0 300 270 52 88 chr20 30258714 30259021 -41894861 + MLT1I LTR MaLR 104 399 -10 293 276 156 21 chr20 30259145 30259428 -41894454 - L1M4 LINE L1 -1302 4844 4524 22 35 0 0 chr20 30259944 30259973 -41893909 + AT_rich Low_complexity Low_complexity 1 29 0 2212 126 0 13 chr20 30259973 30260290 -41893592 - AluSq SINE Alu 0 313 1 1888 191 60 17 chr20 30261321 30261723 -41892159 + MSTB1 LTR MaLR 1 419 -13 238 200 0 0 chr20 30261918 30261968 -41891914 - MLT2B3 LTR ERVL -4 550 501 215 206 199 59 chr20 30262143 30262279 -41891603 - MIR SINE MIR -38 224 70 646 286 93 46 chr20 30263339 30263817 -41890065 + MER101 LTR ERV1 24 445 -29 200 189 0 0 chr20 30264117 30264154 -41889728 + CT-rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr20 30264160 30264181 -41889701 + (TTG)n Simple_repeat Simple_repeat 1 21 0 708 279 138 74 chr20 30264425 30264890 -41888992 + MLT1H LTR MaLR 15 549 0 296 224 0 0 chr20 30264990 30265057 -41888825 - MLT1K LTR MaLR -23 565 499 2444 68 6 0 chr20 30265398 30265709 -41888173 - AluSq SINE Alu 0 313 1 802 324 71 38 chr20 30265712 30266234 -41887648 + LTR67 LTR ERVL 8 546 -11 616 289 158 16 chr20 30266708 30267173 -41886709 - MLT1H1 LTR MaLR -2 565 8 697 258 218 17 chr20 30267224 30267522 -41886360 - LTR16C LTR ERVL 0 491 134 337 289 85 63 chr20 30267783 30268053 -41885829 - MLT1K LTR MaLR -9 579 304 985 264 127 25 chr20 30271269 30271742 -41882140 + L2 LINE L2 368 888 -2426 503 297 0 0 chr20 30272289 30272427 -41881455 + L2 LINE L2 1817 1954 -1360 318 80 0 0 chr20 30272920 30272970 -41880912 + (T)n Simple_repeat Simple_repeat 1 50 0 598 274 193 43 chr20 30272976 30273716 -41880166 + L2 LINE L2 2421 3270 -2 447 284 17 0 chr20 30274993 30275109 -41878773 + MER20B DNA MER1_type 36 153 -630 261 254 0 0 chr20 30275123 30275186 -41878696 - MLT1I LTR MaLR -27 382 320 236 193 129 86 chr20 30275313 30275453 -41878429 - MLT1J LTR MaLR -253 258 113 22 35 0 0 chr20 30276474 30276503 -41877379 + AT_rich Low_complexity Low_complexity 1 29 0 399 299 72 29 chr20 30276953 30277231 -41876651 + LTR16A1 LTR ERVL 168 457 0 723 271 150 12 chr20 30277757 30278284 -41875598 - Charlie7 DNA MER1_type -243 2369 1721 1637 179 6 31 chr20 30278919 30279238 -41874644 - AluJo SINE Alu -1 311 1 288 250 28 0 chr20 30280199 30280271 -41873611 + (CA)n Simple_repeat Simple_repeat 2 75 0 189 325 53 18 chr20 30280469 30280583 -41873299 + L2 LINE L2 3149 3266 -6 277 323 181 0 chr20 30280729 30280884 -41872998 - MIR SINE MIR -19 243 61 471 264 206 18 chr20 30281315 30281591 -41872291 + LTR16C LTR ERVL 154 481 -10 235 200 12 12 chr20 30281878 30281963 -41871919 + CT-rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr20 30282502 30282523 -41871359 + AT_rich Low_complexity Low_complexity 1 21 0 2114 138 47 96 chr20 30282803 30283253 -41870629 - MSTA LTR MaLR 0 428 1 1128 120 0 0 chr20 30285256 30285444 -41868438 - AluY SINE Alu 0 312 125 414 323 43 0 chr20 30286458 30286644 -41867238 + MER90 LTR ERV1 419 612 -2 363 296 51 71 chr20 30287345 30287783 -41866099 + L1MC4a LINE L1 5497 5826 -303 4633 192 32 26 chr20 30288126 30289026 -41864856 + L1MB3 LINE L1 4677 5570 -613 2314 64 0 3 chr20 30289026 30289346 -41864536 + AluY SINE Alu 1 311 0 4633 192 32 26 chr20 30289346 30289418 -41864464 + L1MB3 LINE L1 5570 5640 -543 1851 140 0 29 chr20 30289418 30289726 -41864156 + AluSq SINE Alu 2 300 -13 4633 192 32 26 chr20 30289726 30290249 -41863633 + L1MB3 LINE L1 5640 6181 -2 23 22 0 44 chr20 30291293 30291323 -41862559 + AT_rich Low_complexity Low_complexity 1 30 -13 1795 111 6 117 chr20 30291323 30291673 -41862209 - AluSx SINE Alu -1 311 1 23 22 0 44 chr20 30291673 30291687 -41862195 + AT_rich Low_complexity Low_complexity 30 43 0 421 252 7 7 chr20 30292965 30293104 -41860778 - L1MC4 LINE L1 -1 8041 7903 220 269 34 17 chr20 30293105 30293341 -41860541 + (TA)n Simple_repeat Simple_repeat 1 240 0 1128 233 55 60 chr20 30293343 30293560 -41860322 - L1MC4 LINE L1 -125 7917 7701 2016 190 98 21 chr20 30293560 30294029 -41859853 - MLT1D LTR MaLR 0 505 1 1128 233 55 60 chr20 30294029 30294214 -41859668 - L1MC4 LINE L1 -341 7701 7517 923 246 144 78 chr20 30294419 30294932 -41858950 + MLT1H LTR MaLR 1 547 -2 3186 134 2 0 chr20 30295509 30295949 -41857933 + MER1A DNA MER1_type 1 441 -88 200 271 14 14 chr20 30296282 30296352 -41857530 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 316 325 12 19 chr20 30296357 30296515 -41857367 + CT-rich Low_complexity Low_complexity 1 156 0 249 245 0 0 chr20 30296529 30296631 -41857251 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 658 296 35 18 chr20 30296726 30296952 -41856930 + MIR SINE MIR 10 239 -23 1058 183 37 37 chr20 30297775 30298016 -41855866 - L1ME1 LINE L1 -12 6154 5914 339 347 8 0 chr20 30298181 30298305 -41855577 + MIR SINE MIR 40 164 -98 395 238 24 40 chr20 30298447 30298573 -41855309 + MIR SINE MIR 95 218 -44 6358 225 68 34 chr20 30298728 30301024 -41852858 - L1MB7 LINE L1 -28 6654 4439 2043 108 0 0 chr20 30301024 30301301 -41852581 - AluSc SINE Alu -8 301 25 6358 225 68 34 chr20 30301301 30301322 -41852560 - L1MB7 LINE L1 -2243 4439 4420 2339 92 0 0 chr20 30301322 30301628 -41852254 - AluSg1 SINE Alu -3 306 1 6358 225 68 34 chr20 30301628 30303645 -41850237 - L1MB7 LINE L1 -2262 4420 2 658 244 10 15 chr20 30304500 30304701 -41849181 + MER69 DNA AcHobo 2323 2522 -4 183 245 75 0 chr20 30304898 30304951 -41848931 - L3 LINE CR1 -928 649 593 293 349 24 0 chr20 30307728 30307897 -41845985 + (CA)n Simple_repeat Simple_repeat 2 174 0 332 22 22 0 chr20 30308036 30308081 -41845801 + (CA)n Simple_repeat Simple_repeat 2 47 0 186 231 39 0 chr20 30309056 30309108 -41844774 + MIR SINE MIR 88 141 -67 372 311 133 26 chr20 30309669 30309939 -41843943 + L1MC4 LINE L1 7478 7776 -266 339 298 0 41 chr20 30310413 30310534 -41843348 + C-rich Low_complexity Low_complexity 1 116 0 992 250 60 3 chr20 30310989 30311289 -41842593 - MER33 DNA MER1_type -3 321 5 348 209 192 29 chr20 30311422 30311594 -41842288 - L2 LINE L2 -296 3017 2818 381 311 65 36 chr20 30311755 30312032 -41841850 - L1ME3 LINE L1 -9 6153 5869 516 135 30 113 chr20 30313331 30313464 -41840418 + FLAM_A SINE Alu 8 129 -13 1529 206 21 74 chr20 30314744 30315177 -41838705 + MER31B LTR ERV1 6 415 -51 190 278 111 8 chr20 30315223 30315349 -41838533 + L2 LINE L2 2291 2429 -885 235 279 58 12 chr20 30315379 30315465 -41838417 + MIR SINE MIR 94 183 -79 274 282 109 73 chr20 30315525 30315773 -41838109 - MLT1H LTR MaLR -198 351 95 275 193 0 36 chr20 30315873 30315956 -41837926 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 861 220 105 5 chr20 30317753 30317962 -41835920 + MSTA LTR MaLR 1 230 -198 309 363 38 0 chr20 30317974 30318131 -41835751 - L2 LINE L2 -245 3068 2906 277 377 40 10 chr20 30318236 30318533 -41835349 - L2 LINE L2 -540 2774 2469 2716 170 44 2 chr20 30318709 30319186 -41834696 - LOR1a LTR ERV1 0 497 1 582 165 0 0 chr20 30319187 30319278 -41834604 - LOR1a-int LTR ERV1 -3 8117 8027 * 696 96 11 0 chr20 30319277 30319371 -41834511 - LOR1a-int LTR ERV1 -858 7262 7168 311 222 0 0 chr20 30319371 30319434 -41834448 - MER72 LTR ERV1 -650 72 10 1266 161 5 23 chr20 30319434 30319652 -41834230 - LOR1a-int LTR ERV1 -1077 7043 6830 2023 120 0 0 chr20 30319833 30320107 -41833775 - LOR1a-int LTR ERV1 -4070 4050 3777 538 190 8 25 chr20 30320095 30320216 -41833666 - LOR1a-int LTR ERV1 -2186 4145 4027 * 7208 114 43 6 chr20 30320411 30321550 -41832332 - LOR1a-int LTR ERV1 -4337 3783 2603 921 123 8 0 chr20 30321552 30321682 -41832200 + FLAM_C SINE Alu 3 133 -10 9937 145 48 37 chr20 30321684 30322658 -41831224 - LOR1a-int LTR ERV1 -5110 2706 1744 2190 116 0 0 chr20 30322658 30322952 -41830930 - AluY SINE Alu -17 294 1 2351 95 0 0 chr20 30322961 30323257 -41830625 - AluSg SINE Alu -14 296 1 9937 145 48 37 chr20 30323257 30324544 -41829338 - LOR1a-int LTR ERV1 -6079 1737 1 2328 162 94 9 chr20 30324544 30325002 -41828880 - LOR1a LTR ERV1 0 497 1 7192 194 88 22 chr20 30325905 30327461 -41826421 + MER52A LTR ERV1 1 1755 0 209 289 0 40 chr20 30327478 30327554 -41826328 + CT-rich Low_complexity Low_complexity 4 76 0 4255 194 54 41 chr20 30327647 30328907 -41824975 + L1PB4 LINE L1 3845 5213 -943 1590 193 3 3 chr20 30328907 30329207 -41824675 + AluJo SINE Alu 12 311 -1 4255 194 54 41 chr20 30329207 30329795 -41824087 + L1PB4 LINE L1 5213 5792 -364 859 52 0 17 chr20 30329850 30330002 -41823880 + L1PA4 LINE L1 6019 6168 0 1498 201 25 3 chr20 30330002 30330320 -41823562 + L1PB4 LINE L1 5829 6153 -3 357 305 9 0 chr20 30330507 30330612 -41823270 + (CAT)n Simple_repeat Simple_repeat 3 108 0 397 204 44 0 chr20 30330626 30330763 -41823119 + (CACCAT)n Simple_repeat Simple_repeat 1 143 0 482 228 0 5 chr20 30330776 30330987 -41822895 + (CACCAT)n Simple_repeat Simple_repeat 1 209 0 2187 194 36 14 chr20 30330987 30331404 -41822478 + MSTB LTR MaLR 1 426 0 598 215 6 11 chr20 30331406 30331583 -41822299 + (CACCAT)n Simple_repeat Simple_repeat 4 179 0 29 28 0 0 chr20 30332523 30332559 -41821323 + AT_rich Low_complexity Low_complexity 1 36 0 473 243 42 21 chr20 30332586 30332730 -41821152 - MIR SINE MIR -82 180 34 646 260 56 20 chr20 30333032 30333228 -41820654 - LTR16C LTR ERVL -18 473 271 22 35 0 0 chr20 30333689 30333718 -41820164 + AT_rich Low_complexity Low_complexity 1 29 0 416 306 131 33 chr20 30334274 30334611 -41819271 + MLT1I LTR MaLR 1 370 -39 4508 163 30 24 chr20 30334620 30335455 -41818427 - L1PA16 LINE L1 -9 6157 5318 * 7395 144 14 7 chr20 30335433 30336952 -41816930 - L1PA12 LINE L1 -159 6009 4503 2337 92 3 3 chr20 30336952 30337255 -41816627 - AluY SINE Alu -8 303 1 7395 144 14 7 chr20 30337255 30337340 -41816542 - L1PA12 LINE L1 -1665 4503 4420 219 69 0 0 chr20 30337340 30337369 -41816513 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 7395 144 14 7 chr20 30337369 30337693 -41816189 - L1PA12 LINE L1 -1748 4420 4066 4205 139 29 3 chr20 30337699 30338410 -41815472 - L1PA15-16 LINE L1 -3866 2983 2255 1412 161 8 12 chr20 30338407 30338655 -41815227 - L1MB3 LINE L1 -236 5947 5701 * 309 276 10 0 chr20 30339179 30339277 -41814605 - MIR SINE MIR -71 191 93 562 294 77 70 chr20 30339283 30339711 -41814171 + LTR16A LTR ERVL 12 442 -8 236 261 80 106 chr20 30340288 30340476 -41813406 - MLT1L LTR MaLR -117 498 316 192 152 0 0 chr20 30340496 30340529 -41813353 + GA-rich Low_complexity Low_complexity 1 33 0 195 42 0 0 chr20 30341722 30341746 -41812136 + (TC)n Simple_repeat Simple_repeat 2 25 0 221 196 18 0 chr20 30341751 30341807 -41812075 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 2190 289 92 16 chr20 30342252 30343244 -41810638 + MER69 DNA AcHobo 1 1067 -1459 357 242 48 8 chr20 30343249 30343373 -41810509 + MER69 DNA AcHobo 1942 2070 -456 180 77 0 0 chr20 30344121 30344147 -41809735 + (TC)n Simple_repeat Simple_repeat 2 27 0 256 299 0 0 chr20 30344151 30344218 -41809664 + (TA)n Simple_repeat Simple_repeat 1 67 0 333 289 113 43 chr20 30344505 30344896 -41808986 + MLT1L LTR MaLR 183 600 -15 2215 299 85 15 chr20 30345067 30346064 -41807818 + MER69 DNA AcHobo 1 1067 -1459 856 285 42 22 chr20 30346036 30346446 -41807436 + MER69 DNA AcHobo 1910 2327 -199 * 1587 213 175 25 chr20 30346480 30347052 -41806830 + LTR65 LTR ERV1 12 669 0 191 256 0 0 chr20 30397075 30397118 -41756764 - MIR SINE MIR -114 148 106 293 297 45 62 chr20 30399058 30399236 -41754646 + MIR SINE MIR 2 171 -37 681 171 0 0 chr20 30399739 30399914 -41753968 + (TG)n Simple_repeat Simple_repeat 2 176 0 189 283 0 33 chr20 30400238 30400298 -41753584 - MIR SINE MIR 0 262 205 232 256 48 33 chr20 30400423 30400553 -41753329 - L2 LINE L2 -308 3005 2872 274 320 113 13 chr20 30400698 30400848 -41753034 - MIR SINE MIR -21 241 77 519 304 136 19 chr20 30402848 30403567 -41750315 + L1M4c LINE L1 2276 3098 -3284 387 313 103 15 chr20 30403766 30403961 -41749921 + L1M4c LINE L1 3192 3403 -2979 536 294 93 15 chr20 30404125 30404506 -41749376 - L2 LINE L2 -129 3184 2768 639 88 0 0 chr20 30405987 30406078 -41747804 + (GA)n Simple_repeat Simple_repeat 1 91 0 201 74 0 0 chr20 30408830 30408857 -41745025 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2365 217 48 33 chr20 30411309 30411889 -41741993 - MLT1E LTR MaLR -4 589 1 671 257 19 12 chr20 30412486 30412689 -41741193 + ERVL LTR ERVL 4812 5012 -647 323 241 13 0 chr20 30413900 30413979 -41739903 + LTR16C LTR ERVL 75 154 -337 416 240 50 0 chr20 30414501 30414622 -41739260 + LTR16C LTR ERVL 350 476 -15 250 339 11 69 chr20 30415167 30415356 -41738526 - MIR SINE MIR -37 225 48 418 280 23 0 chr20 30415485 30415617 -41738265 - Charlie4a DNA MER1_type -14 494 360 3352 100 13 13 chr20 30415620 30416142 -41737740 - L1PB3 LINE L1 -6 6148 5627 486 209 50 7 chr20 30416148 30416287 -41737595 + L1P LINE L1 5089 5233 -913 2062 107 71 0 chr20 30416299 30416580 -41737302 - AluSx SINE Alu -11 301 1 511 288 152 28 chr20 30416582 30416905 -41736977 - Charlie4a DNA MER1_type -145 363 1 215 214 43 43 chr20 30417178 30417248 -41736634 + MER5A DNA MER1_type 88 157 -32 * 279 258 67 22 chr20 30417199 30417288 -41736594 - MER5A DNA MER1_type -95 94 2 221 41 41 41 chr20 30417814 30417863 -41736019 + (GGA)n Simple_repeat Simple_repeat 1 49 0 201 311 75 0 chr20 30417971 30418077 -41735805 - MIR SINE MIR -115 147 34 450 160 0 0 chr20 30419689 30419764 -41734118 - MLT1J2 LTR MaLR -312 138 64 1623 186 48 3 chr20 30420973 30421306 -41732576 + MER68 LTR ERV1 43 390 -172 355 136 45 0 chr20 30421310 30421376 -41732506 + MER68 LTR ERV1 322 390 -172 347 152 45 0 chr20 30421380 30421446 -41732436 + MER68 LTR ERV1 322 390 -172 313 167 45 0 chr20 30421450 30421516 -41732366 + MER68 LTR ERV1 322 390 -172 321 167 45 0 chr20 30421520 30421586 -41732296 + MER68 LTR ERV1 322 390 -172 1013 226 48 0 chr20 30421590 30421820 -41732062 + MER68 LTR ERV1 322 562 0 250 286 98 53 chr20 30423221 30423354 -41730528 + MIR3 SINE MIR 1 139 -69 353 325 6 0 chr20 30423535 30423692 -41730190 + MER103 DNA DNA 8 165 -1 2432 146 45 7 chr20 30424440 30424884 -41728998 - MER65C LTR ERV1 0 461 1 330 224 84 28 chr20 30425106 30425213 -41728669 + Charlie7 DNA MER1_type 45 157 -2455 818 226 28 0 chr20 30425400 30425577 -41728305 + MER5A DNA MER1_type 7 188 -1 931 252 166 31 chr20 30425746 30426265 -41727617 + MLT1G LTR MaLR 1 589 -1 300 303 49 16 chr20 30426382 30426504 -41727378 - MIR3 SINE MIR -33 175 50 183 240 40 20 chr20 30426523 30426573 -41727309 + MIR SINE MIR 20 70 -192 457 275 219 1 chr20 30427489 30427659 -41726223 - MLT1J LTR MaLR -199 312 67 276 30 0 0 chr20 30431390 30431423 -41722459 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2071 112 0 14 chr20 30431424 30431709 -41722173 - AluSq SINE Alu -32 281 1 299 299 11 0 chr20 30432614 30432701 -41721181 + MER94 DNA DNA 18 105 -29 390 300 23 0 chr20 30433567 30433697 -41720185 + LTR16A LTR ERVL 138 270 -180 370 217 24 0 chr20 30433737 30433820 -41720062 + LTR16A LTR ERVL 366 450 0 233 351 36 0 chr20 30433868 30433979 -41719903 + (CATG)n Simple_repeat Simple_repeat 3 117 0 2279 123 3 0 chr20 30435251 30435561 -41718321 - AluSx SINE Alu -1 311 1 2520 74 0 3 chr20 30435654 30435966 -41717916 - AluY SINE Alu 0 311 1 374 242 32 0 chr20 30436026 30436121 -41717761 - MLT1G1 LTR MaLR -11 584 487 290 307 88 7 chr20 30436321 30436458 -41717424 - MIR SINE MIR -8 254 107 1934 142 7 30 chr20 30437427 30437729 -41716153 - AluJb SINE Alu -17 295 1 257 164 0 18 chr20 30438033 30438088 -41715794 + GA-rich Low_complexity Low_complexity 4 57 0 1448 223 75 5 chr20 30439298 30439698 -41714184 + Charlie4a DNA MER1_type 20 447 -61 181 282 118 12 chr20 30440258 30440343 -41713539 - L2 LINE L2 -20 3293 3200 224 287 0 80 chr20 30441197 30441385 -41712497 + G-rich Low_complexity Low_complexity 4 176 0 264 301 0 66 chr20 30441490 30441673 -41712209 + G-rich Low_complexity Low_complexity 2 172 0 230 296 12 0 chr20 30442192 30442273 -41711609 + CT-rich Low_complexity Low_complexity 2 83 0 1274 241 116 45 chr20 30443622 30444153 -41709729 - MLT1G3 LTR MaLR -9 586 1 1813 242 71 35 chr20 30445083 30445824 -41708058 + L1ME LINE L1 601 1396 -5168 2291 137 0 3 chr20 30445824 30446161 -41707721 + MER1B DNA MER1_type 1 336 -1 1813 242 71 35 chr20 30446161 30446477 -41707405 + L1ME LINE L1 1396 1699 -4865 1039 122 14 0 chr20 30446479 30446626 -41707256 + AluSg/x SINE Alu 158 306 -6 2874 256 47 68 chr20 30446626 30447406 -41706476 + L1ME LINE L1 1688 2483 -4081 2245 109 20 0 chr20 30447406 30447699 -41706183 + AluY SINE Alu 1 299 -12 2874 256 47 68 chr20 30447699 30448810 -41705072 + L1ME LINE L1 2483 3686 -2878 7041 70 47 27 chr20 30448810 30450563 -41703319 - SVA Other Other -553 1384 1 2874 256 47 68 chr20 30450563 30450769 -41703113 + L1ME LINE L1 3686 3895 -2669 445 284 37 31 chr20 30450770 30450932 -41702950 - MER5B DNA MER1_type 0 178 16 1008 287 46 12 chr20 30453530 30453944 -41699938 + L1ME LINE L1 5734 6161 -421 185 178 22 0 chr20 30455160 30455205 -41698677 + (TA)n Simple_repeat Simple_repeat 1 46 0 224 0 65 0 chr20 30455661 30455692 -41698190 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 2002 119 26 0 chr20 30455697 30455965 -41697917 - AluSx SINE Alu -37 275 1 470 230 40 27 chr20 30457029 30457177 -41696705 + MER5A DNA MER1_type 6 155 -34 415 277 100 30 chr20 30457701 30458062 -41695820 - L1ME LINE L1 -301 5820 5375 2750 171 24 64 chr20 30459668 30460306 -41693576 - LTR9 LTR ERV1 0 612 1 238 298 86 7 chr20 30460463 30460614 -41693268 - LTR16A1 LTR ERVL -287 170 8 357 282 19 0 chr20 30461367 30461470 -41692412 - MIR SINE MIR -84 124 20 1594 173 13 53 chr20 30461766 30462084 -41691798 - AluJb SINE Alu -7 305 1 288 316 30 38 chr20 30463222 30463459 -41690423 - L1ME4a LINE L1 -222 5899 5665 1638 161 84 0 chr20 30463477 30463762 -41690120 + AluSx SINE Alu 1 309 -3 805 123 25 12 chr20 30463795 30463957 -41689925 + GA-rich Low_complexity Low_complexity 4 167 0 282 256 56 0 chr20 30464555 30464635 -41689247 + MIR SINE MIR 67 142 -66 345 24 0 0 chr20 30464697 30464739 -41689143 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 207 311 57 25 chr20 30464859 30464981 -41688901 + MIR SINE MIR 137 262 0 5295 181 81 124 chr20 30465242 30466390 -41687492 - L1MC3 LINE L1 0 7995 6879 264 98 0 0 chr20 30466390 30466431 -41687451 + MADE1 DNA Mariner 40 80 0 5295 181 81 124 chr20 30466431 30467248 -41686634 - L1MC3 LINE L1 -1116 6879 6029 1148 226 41 126 chr20 30467729 30468279 -41685603 + MLT1G LTR MaLR 1 555 0 547 291 87 0 chr20 30468284 30468490 -41685392 - MIR SINE MIR -27 235 12 1801 171 40 70 chr20 30469724 30470052 -41683830 + MSTB1 LTR MaLR 1 314 -118 2115 129 3 0 chr20 30470052 30470346 -41683536 - AluSx SINE Alu -17 295 1 1801 171 40 70 chr20 30470346 30470462 -41683420 + MSTB1 LTR MaLR 314 432 0 1369 227 21 35 chr20 30471246 30471621 -41682261 - MLT1A2 LTR MaLR -4 370 1 1795 147 0 7 chr20 30474249 30474522 -41679360 - AluSx SINE Alu 0 312 42 1242 260 210 11 chr20 30475083 30475544 -41678338 + MLT1H1 LTR MaLR 1 553 -2 334 324 80 9 chr20 30476095 30476470 -41677412 + LTR16C LTR ERVL 75 488 -3 559 291 44 86 chr20 30477037 30477098 -41676784 + HAL1 LINE L1 621 683 -1824 1886 168 54 0 chr20 30477098 30477468 -41676414 - MLT1B LTR MaLR 0 390 1 559 291 44 86 chr20 30477468 30477997 -41675885 + HAL1 LINE L1 683 1186 -1321 659 149 8 0 chr20 30478005 30478126 -41675756 + GA-rich Low_complexity Low_complexity 4 125 0 611 316 159 32 chr20 30478144 30478648 -41675234 + HAL1 LINE L1 1385 1952 -555 373 238 97 57 chr20 30478765 30478992 -41674890 + HAL1 LINE L1 2164 2399 -108 1073 295 105 23 chr20 30479121 30479637 -41674245 + L1ME3A LINE L1 5596 6153 -17 1903 193 61 8 chr20 30480240 30480633 -41673249 + MSTB LTR MaLR 13 426 0 511 242 45 0 chr20 30482232 30482364 -41671518 - MER3 DNA MER1_type -4 205 68 231 317 10 10 chr20 30483175 30483279 -41670603 - L1M4 LINE L1 -2415 3731 3628 578 283 44 74 chr20 30483546 30483843 -41670039 - L1ME LINE L1 -404 5766 5479 317 106 29 67 chr20 30484720 30484824 -41669058 + GA-rich Low_complexity Low_complexity 3 102 0 534 140 37 37 chr20 30484847 30485011 -41668871 + GA-rich Low_complexity Low_complexity 2 165 0 214 29 57 0 chr20 30485027 30485062 -41668820 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 249 33 0 0 chr20 30487383 30487413 -41666469 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 235 236 318 0 chr20 30490238 30490348 -41663534 - MER5B DNA MER1_type -33 145 1 328 254 49 90 chr20 30490560 30490671 -41663211 + MIR SINE MIR 6 107 -153 2189 100 7 13 chr20 30490671 30490972 -41662910 + AluSg SINE Alu 5 303 -7 328 254 49 90 chr20 30490972 30491028 -41662854 + MIR SINE MIR 107 164 -96 197 151 19 0 chr20 30493616 30493669 -41660213 + (GTTTG)n Simple_repeat Simple_repeat 2 55 0 623 191 143 37 chr20 30496213 30496402 -41657480 + MER20 DNA MER1_type 11 219 0 200 329 27 0 chr20 30497339 30497412 -41656470 - L2 LINE L2 -9 3263 3189 328 331 45 26 chr20 30498107 30498261 -41655621 - MIR SINE MIR -97 165 9 304 329 40 26 chr20 30498596 30498748 -41655134 - MIR SINE MIR -74 188 35 1560 173 105 3 chr20 30498815 30499157 -41654725 - MLT1B LTR MaLR -8 382 6 198 264 57 57 chr20 30501557 30501663 -41652219 + L2 LINE L2 2959 3064 -208 3712 171 60 23 chr20 30503463 30504211 -41649671 + LTR39 LTR ERV1 1 776 -7 260 141 0 28 chr20 30504929 30505000 -41648882 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 2754 161 41 4 chr20 30506461 30506972 -41646910 + L1PB4 LINE L1 5625 6154 -2 182 272 74 12 chr20 30507179 30507260 -41646622 - L2 LINE L2 -36 3236 3151 214 273 31 117 chr20 30507634 30507762 -41646120 - MIR SINE MIR -44 218 102 317 200 25 0 chr20 30508746 30508826 -41645056 + LTR16C LTR ERVL 385 466 -25 1294 296 53 8 chr20 30509165 30509658 -41644224 - L1ME1 LINE L1 -31 6135 5621 22 0 0 0 chr20 30509964 30509986 -41643896 + AT_rich Low_complexity Low_complexity 1 22 0 10986 174 10 27 chr20 30509986 30512600 -41641282 - L1PB1 LINE L1 0 6867 4303 1722 181 51 0 chr20 30512600 30512893 -41640989 - AluJb SINE Alu -4 308 1 10986 174 10 27 chr20 30512893 30513946 -41639936 - L1PB1 LINE L1 -2564 4303 3234 767 127 13 53 chr20 30513945 30514095 -41639787 - L1PB1 LINE L1 -6084 779 636 * 1087 169 0 0 chr20 30514093 30514276 -41639606 - L1PB1 LINE L1 -6678 185 3 2173 71 0 3 chr20 30514617 30514947 -41638935 - AluY SINE Alu 0 329 1 516 249 162 0 chr20 30515647 30515820 -41638062 + MER3 DNA MER1_type 9 209 0 206 253 101 13 chr20 30516409 30516488 -41637394 + MIR SINE MIR 58 143 -65 243 266 16 16 chr20 30516509 30516573 -41637309 - MER5A DNA MER1_type -6 183 120 953 206 24 28 chr20 30516574 30516822 -41637060 + L1MD3 LINE L1 7749 7995 0 287 288 92 25 chr20 30517974 30518137 -41635745 + MER5A DNA MER1_type 14 187 -2 230 208 38 0 chr20 30518994 30519047 -41634835 - L2 LINE L2 -4 3268 3214 2258 63 0 11 chr20 30520334 30520652 -41633230 - AluY SINE Alu 0 315 1 283 205 217 12 chr20 30520958 30521041 -41632841 + MLT1J1 LTR MaLR 36 135 -311 339 274 103 45 chr20 30521050 30521273 -41632609 + MLT1J2 LTR MaLR 204 439 -11 361 237 112 10 chr20 30522118 30522259 -41631623 + MIR SINE MIR 25 180 -77 476 291 118 34 chr20 30524384 30524843 -41629039 + MLT1G1 LTR MaLR 16 590 0 267 344 18 12 chr20 30525820 30525983 -41627899 + G-rich Low_complexity Low_complexity 6 169 0 266 248 53 60 chr20 30526167 30526300 -41627582 - LTR16C LTR ERVL -1 490 359 266 233 14 14 chr20 30526944 30527017 -41626865 - MER63 DNA MER1_type -11 1049 977 366 247 22 0 chr20 30527019 30527108 -41626774 - MER63 DNA MER1_type -312 748 658 304 299 69 52 chr20 30527190 30527364 -41626518 + MER5A DNA MER1_type 12 188 -1 534 204 190 7 chr20 30527804 30527946 -41625936 - MER5A DNA MER1_type -7 182 15 245 188 0 21 chr20 30528177 30528225 -41625657 - MLT1G LTR MaLR -97 458 412 273 306 35 12 chr20 30528339 30528424 -41625458 - MLT1G LTR MaLR -313 277 191 241 259 0 35 chr20 30528496 30528581 -41625301 - MLT1G LTR MaLR -488 105 24 22 0 0 0 chr20 30529259 30529281 -41624601 + AT_rich Low_complexity Low_complexity 1 22 0 210 128 0 0 chr20 30529406 30529445 -41624437 + (TG)n Simple_repeat Simple_repeat 2 40 0 507 281 89 38 chr20 30529566 30530286 -41623596 - L1MEd LINE L1 -4786 1524 700 354 296 47 71 chr20 30530319 30530539 -41623343 - HAL1b LINE L1 -740 608 397 2297 89 0 0 chr20 30530539 30530841 -41623041 - AluY SINE Alu -9 302 1 354 296 47 71 chr20 30530841 30530958 -41622924 - HAL1b LINE L1 -951 397 279 212 194 0 0 chr20 30531078 30531114 -41622768 + (TA)n Simple_repeat Simple_repeat 1 36 0 782 271 61 23 chr20 30531393 30531832 -41622050 - LTR50 LTR ERVL -13 782 380 * 833 246 195 11 chr20 30531818 30532274 -41621608 - LTR50 LTR ERVL -244 551 12 218 250 0 0 chr20 30533682 30533730 -41620152 + (TGAG)n Simple_repeat Simple_repeat 3 50 0 4565 175 24 13 chr20 30534082 30535117 -41618765 - L1MB7 LINE L1 -31 6869 5822 1251 96 5 81 chr20 30535128 30535337 -41618545 - L1PB1 LINE L1 -1 6150 5958 10591 137 65 8 chr20 30535343 30538992 -41614890 - L1MB7 LINE L1 -2738 4124 125 9220 241 55 13 chr20 30538977 30541823 -41612059 - L1M4 LINE L1 -1029 5117 2151 * 225 307 40 13 chr20 30541934 30542009 -41611873 + MIR SINE MIR 68 144 -64 539 229 85 45 chr20 30542760 30542929 -41610953 - Charlie2a DNA MER1_type -30 2832 2650 2223 100 3 0 chr20 30542929 30543238 -41610644 + AluSg SINE Alu 1 310 0 539 229 85 45 chr20 30543238 30543291 -41610591 - Charlie2a DNA MER1_type -212 2650 2601 1422 119 15 0 chr20 30543291 30543492 -41610390 + AluSg SINE Alu 21 224 -86 3411 240 94 83 chr20 30543497 30545643 -41608239 - Charlie2a DNA MER1_type -246 2616 447 3200 204 78 42 chr20 30547213 30547738 -41606144 - MER89-int LTR ERV1 -3053 3748 3176 1329 261 54 24 chr20 30547738 30548163 -41605719 + LTR47B LTR ERVL 2 439 -4 3200 204 78 42 chr20 30548163 30548527 -41605355 - MER89-int LTR ERV1 -3625 3176 2827 433 230 20 0 chr20 30548535 30548635 -41605247 - MER89-int LTR ERV1 -4153 2648 2547 6289 197 49 49 chr20 30548909 30550127 -41603755 - MER89-int LTR ERV1 -4232 2569 1349 1530 230 14 22 chr20 30550127 30550171 -41603711 - MLT2D LTR ERVL 0 414 371 315 0 0 0 chr20 30550171 30550206 -41603676 + (TG)n Simple_repeat Simple_repeat 1 35 0 1530 230 14 22 chr20 30550206 30550578 -41603304 - MLT2D LTR ERVL -43 371 1 6289 197 49 49 chr20 30550578 30550841 -41603041 - MER89-int LTR ERV1 -5451 1350 1088 576 267 71 35 chr20 30550843 30551154 -41602728 + L1ME3 LINE L1 5756 6077 -85 1811 127 8 80 chr20 30551785 30552156 -41601726 - MER4A LTR ERV1 0 664 261 598 147 0 11 chr20 30552160 30552255 -41601627 - MER4A LTR ERV1 -570 94 1 808 253 47 4 chr20 30553732 30554104 -41599778 + MER63 DNA MER1_type 4 1060 0 259 224 122 75 chr20 30555757 30555864 -41598018 + MER5A DNA MER1_type 78 189 0 328 132 88 29 chr20 30555868 30555936 -41597946 + L2 LINE L2 3186 3257 -56 290 221 145 23 chr20 30556061 30556192 -41597690 - MER117 DNA MER1_type -28 169 23 198 253 24 84 chr20 30556529 30556612 -41597270 - L2 LINE L2 -3 3269 3192 436 254 125 75 chr20 30557909 30558228 -41595654 + L1MC4 LINE L1 7538 7872 -170 415 244 125 24 chr20 30558292 30558421 -41595461 - L1MC4 LINE L1 -11 8031 7880 317 104 0 0 chr20 30558421 30558469 -41595413 + L1MA9 LINE L1 6265 6312 0 415 244 125 24 chr20 30558469 30558507 -41595375 - L1MC4 LINE L1 -162 7880 7847 265 210 16 16 chr20 30559018 30559080 -41594802 - L1P5 LINE L1 -268 5888 5827 1398 164 18 32 chr20 30559112 30559392 -41594490 + L1MA7 LINE L1 5876 6151 -140 351 113 0 0 chr20 30559392 30559445 -41594437 + (CA)n Simple_repeat Simple_repeat 1 53 0 267 150 90 70 chr20 30560555 30560655 -41593227 + LTR16C LTR ERVL 376 477 -14 438 279 71 74 chr20 30561343 30561680 -41592202 - LTR16C LTR ERVL 0 491 156 1643 194 28 22 chr20 30562020 30562376 -41591506 + MLT1A1 LTR MaLR 8 365 0 513 227 141 12 chr20 30562421 30562584 -41591298 + MER5A DNA MER1_type 6 189 0 384 354 43 34 chr20 30563300 30563628 -41590254 - L1MC/D LINE L1 -2143 5665 5335 484 335 124 28 chr20 30564275 30564494 -41589388 - L1MC/D LINE L1 -1537 4609 4413 1638 195 13 3 chr20 30564494 30564792 -41589090 - AluJb SINE Alu -11 301 1 484 335 124 28 chr20 30564792 30565008 -41588874 - L1MC/D LINE L1 -1733 4413 4132 636 227 67 0 chr20 30566874 30567024 -41586858 + MER5B DNA MER1_type 16 175 -3 326 261 43 43 chr20 30567111 30567226 -41586656 - MER5A DNA MER1_type -65 124 10 2250 79 0 4 chr20 30567625 30567903 -41585979 + AluY SINE Alu 33 309 -2 329 137 0 0 chr20 30567958 30568009 -41585873 + MER103 DNA DNA 45 95 -71 545 310 39 0 chr20 30568614 30568769 -41585113 + MER5A DNA MER1_type 29 189 0 322 241 234 0 chr20 30569168 30569309 -41584573 + MER5B DNA MER1_type 1 174 -4 535 233 110 8 chr20 30569624 30569860 -41584022 + MER76 LTR ERV 1 260 -428 282 294 28 28 chr20 30570811 30570920 -41582962 - MIR3 SINE MIR -93 115 7 289 307 88 18 chr20 30570944 30571058 -41582824 - L2 LINE L2 -19 3253 3132 1590 198 35 24 chr20 30571232 30571605 -41582277 + MLT1B LTR MaLR 1 377 -13 305 295 117 101 chr20 30572154 30572598 -41581284 + L1MEd LINE L1 693 1143 -4976 638 311 55 10 chr20 30572628 30572786 -41581096 + HAL1b LINE L1 292 441 -907 324 0 0 0 chr20 30572786 30572822 -41581060 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 638 311 55 10 chr20 30572822 30572972 -41580910 + HAL1b LINE L1 441 614 -734 294 73 0 0 chr20 30573415 30573456 -41580426 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1306 261 114 60 chr20 30573474 30574290 -41579592 + L1MC5 LINE L1 6651 7510 -451 1619 171 3 45 chr20 30574524 30574643 -41579239 + AluJo SINE Alu 27 149 -163 2262 120 0 3 chr20 30574643 30574942 -41578940 + AluSx SINE Alu 1 298 -14 1619 171 3 45 chr20 30574942 30575114 -41578768 + AluJo SINE Alu 149 306 -6 389 238 262 0 chr20 30575118 30575244 -41578638 - MER5A DNA MER1_type -27 162 4 206 62 31 0 chr20 30575386 30575418 -41578464 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2224 94 0 4 chr20 30575422 30575698 -41578184 - AluSc SINE Alu -34 275 1 279 228 41 17 chr20 30576006 30576106 -41577776 - MLT1J LTR MaLR 0 595 450 788 237 57 47 chr20 30576436 30576737 -41577145 + MLT1A1 LTR MaLR 16 426 -41 486 262 159 0 chr20 30577000 30577145 -41576737 + MER5A DNA MER1_type 16 183 -6 267 313 36 0 chr20 30577168 30577280 -41576602 + L1MC5 LINE L1 7453 7568 -393 364 225 165 63 chr20 30577295 30577580 -41576302 + L1MC5 LINE L1 7616 7929 -32 185 208 62 0 chr20 30578534 30578582 -41575300 + MIR SINE MIR 106 156 -106 5239 170 31 8 chr20 30578595 30579497 -41574385 - MER49 LTR ERV1 0 923 1 673 170 0 44 chr20 30579671 30579806 -41574076 + L1MCa LINE L1 21 149 -6277 3118 119 53 2 chr20 30579806 30580292 -41573590 - LTR1 LTR ERV1 0 785 275 6648 189 62 43 chr20 30580292 30581519 -41572363 + L1MCa LINE L1 888 2090 -4336 2104 128 7 0 chr20 30581519 30581816 -41572066 + AluSg SINE Alu 1 299 -11 6648 189 62 43 chr20 30581816 30584070 -41569812 + L1MCa LINE L1 2090 4433 -1993 1085 163 0 16 chr20 30584070 30584254 -41569628 + FRAM SINE Alu 1 174 -2 1013 256 10 7 chr20 30584254 30584562 -41569320 + L1MCa LINE L1 4456 4764 -1662 754 158 60 0 chr20 30584562 30584695 -41569187 + L1MC1 LINE L1 6188 6328 -5 264 272 49 0 chr20 30585076 30585157 -41568725 + L2 LINE L2 3183 3267 -46 222 37 0 0 chr20 30585538 30585565 -41568317 + (TG)n Simple_repeat Simple_repeat 2 28 0 255 61 0 0 chr20 30588674 30588707 -41565175 + (CA)n Simple_repeat Simple_repeat 2 34 0 548 283 44 49 chr20 30590057 30590283 -41563599 - MLT1J LTR MaLR -200 311 87 238 325 12 0 chr20 30593168 30593248 -41560634 + (CACG)n Simple_repeat Simple_repeat 3 83 0 3638 174 26 19 chr20 30593648 30594368 -41559514 + L1MB2 LINE L1 5447 6171 0 687 234 128 20 chr20 30594428 30594887 -41558995 - MLT1G LTR MaLR -10 580 11 363 296 136 33 chr20 30595148 30595391 -41558491 + L1M4 LINE L1 5124 5391 -755 982 174 0 0 chr20 30595419 30595591 -41558291 - AluSg/x SINE Alu -4 308 137 191 333 87 0 chr20 30596931 30597000 -41556882 - L2 LINE L2 -5 3267 3193 864 253 26 32 chr20 30597521 30597889 -41555993 - MLT1G LTR MaLR -264 326 1 2717 114 70 5 chr20 30598026 30598455 -41555427 + MSTB2 LTR MaLR 1 457 0 274 192 0 0 chr20 30599590 30599642 -41554240 - MER5B DNA MER1_type -1 177 126 2192 110 0 7 chr20 30599870 30600180 -41553702 - AluSc SINE Alu -1 308 1 330 212 30 0 chr20 30600180 30600246 -41553636 - MER5A DNA MER1_type -113 76 9 204 158 0 0 chr20 30600846 30600884 -41552998 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 291 323 46 0 chr20 30600990 30601120 -41552762 + MLT1H LTR MaLR 56 191 -358 304 273 123 19 chr20 30601167 30601321 -41552561 + MLT1H LTR MaLR 365 534 -15 258 271 0 0 chr20 30602388 30602495 -41551387 + (CA)n Simple_repeat Simple_repeat 1 107 0 241 290 0 0 chr20 30602507 30602576 -41551306 + (CA)n Simple_repeat Simple_repeat 2 70 0 390 278 0 0 chr20 30602589 30602769 -41551113 + (CA)n Simple_repeat Simple_repeat 1 180 0 410 283 14 0 chr20 30602780 30602918 -41550964 + (CA)n Simple_repeat Simple_repeat 2 141 0 353 306 109 5 chr20 30603712 30603905 -41549977 + MIR SINE MIR 28 240 -22 223 143 41 0 chr20 30605137 30605186 -41548696 + A-rich Low_complexity Low_complexity 4 54 0 266 284 0 19 chr20 30606581 30606736 -41547146 + (CA)n Simple_repeat Simple_repeat 2 153 0 298 224 106 12 chr20 30606820 30606905 -41546977 + L2 LINE L2 3197 3289 -24 23 0 0 0 chr20 30607367 30607390 -41546492 + GC_rich Low_complexity Low_complexity 1 23 0 2426 87 0 3 chr20 30609058 30609368 -41544514 - AluY SINE Alu -2 309 1 788 217 10 14 chr20 30609500 30609707 -41544175 - L1M4 LINE L1 -1550 4596 4391 322 323 78 42 chr20 30609722 30609939 -41543943 + MIR SINE MIR 11 235 -27 1939 157 6 6 chr20 30610367 30610724 -41543158 - AluSx SINE Alu 0 312 1 1876 204 49 158 chr20 30611343 30612204 -41541678 - L1MA10 LINE L1 -13 6321 5555 2135 98 7 14 chr20 30612240 30612548 -41541334 - AluSx SINE Alu 0 306 1 801 58 16 8 chr20 30613698 30613819 -41540063 + (TTTC)n Simple_repeat Simple_repeat 3 124 0 200 170 19 0 chr20 30614310 30614363 -41539519 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 607 303 6 22 chr20 30614743 30614921 -41538961 + MIR SINE MIR 5 179 -83 827 274 124 27 chr20 30615101 30615473 -41538409 + LTR16C LTR ERVL 68 475 -16 208 330 136 0 chr20 30617015 30617118 -41536764 + L2 LINE L2 3156 3272 0 2339 76 3 0 chr20 30617180 30617481 -41536401 - AluY SINE Alu -9 302 1 349 350 127 0 chr20 30617911 30618194 -41535688 - L2 LINE L2 -420 2894 2576 180 246 101 43 chr20 30618433 30618571 -41535311 - L2 LINE L2 -1219 2095 1950 21 0 0 0 chr20 30618773 30618794 -41535088 + AT_rich Low_complexity Low_complexity 1 21 0 418 201 76 65 chr20 30620190 30620374 -41533508 - LTR16C LTR ERVL 0 491 306 2287 77 37 0 chr20 30621442 30621741 -41532141 - AluSx SINE Alu -2 310 1 209 161 0 0 chr20 30622420 30622451 -41531431 + (TG)n Simple_repeat Simple_repeat 2 32 0 409 293 116 53 chr20 30622772 30623017 -41530865 - L1MDa LINE L1 -760 1730 1502 2682 134 29 2 chr20 30623017 30623434 -41530448 + MSTA LTR MaLR 1 428 0 409 293 116 53 chr20 30623434 30623510 -41530372 - L1MDa LINE L1 -988 1502 1432 2089 123 0 0 chr20 30623510 30623818 -41530064 + AluSq SINE Alu 1 308 -5 409 293 116 53 chr20 30623818 30625011 -41528871 - L1MDa LINE L1 -1058 1432 43 231 288 260 14 chr20 30625041 30625187 -41528695 + MER102b DNA MER1_type 144 325 -16 414 0 0 0 chr20 30625332 30625378 -41528504 + (TA)n Simple_repeat Simple_repeat 2 47 0 24684 79 5 0 chr20 30625387 30628581 -41525301 + L1PA5 LINE L1 11 3220 -2926 9826 41 38 0 chr20 30628581 30630557 -41523325 + L1PA5 LINE L1 4160 6174 0 2301 64 0 14 chr20 30630558 30630853 -41523029 + AluY SINE Alu 2 292 -19 407 264 23 0 chr20 30630854 30630941 -41522941 - L1MC4 LINE L1 -1340 6702 6614 392 283 33 0 chr20 30630921 30631013 -41522869 + L1MC4 LINE L1 6614 6708 -1334 * 27 0 0 0 chr20 30631016 30631043 -41522839 + AT_rich Low_complexity Low_complexity 1 27 0 1842 98 0 4 chr20 30631043 30631298 -41522584 - AluY SINE Alu -26 285 32 355 270 97 51 chr20 30631331 30631527 -41522355 - MER90 LTR ERV1 -7 568 364 252 184 0 0 chr20 30632976 30633025 -41520857 + CT-rich Low_complexity Low_complexity 2 50 0 261 167 0 0 chr20 30633028 30633082 -41520800 + (CA)n Simple_repeat Simple_repeat 2 55 0 40 73 0 0 chr20 30633438 30633520 -41520362 + AT_rich Low_complexity Low_complexity 1 82 0 1904 129 10 0 chr20 30633637 30633932 -41519950 + AluSq SINE Alu 1 298 -15 2331 191 39 8 chr20 30634032 30634546 -41519336 - L1MB3 LINE L1 -2 6181 5652 369 157 0 0 chr20 30634549 30634600 -41519282 - AluJ/FRAM SINE Alu -20 282 232 620 255 25 0 chr20 30634601 30634758 -41519124 - L1MB3 LINE L1 -511 5669 5509 2021 113 0 7 chr20 30634846 30635139 -41518743 + AluSx SINE Alu 8 298 -14 1357 179 19 70 chr20 30635302 30635614 -41518268 - AluJo SINE Alu -16 296 1 2320 181 39 0 chr20 30635875 30636285 -41517597 - MSTB LTR MaLR 0 426 1 829 315 20 4 chr20 30636334 30636585 -41517297 + MIR SINE MIR 3 257 -5 2368 50 0 3 chr20 30637587 30637885 -41515997 + AluY SINE Alu 1 297 -14 1374 281 92 76 chr20 30638063 30638504 -41515378 - L1MEd LINE L1 -2929 3200 2767 2225 93 26 0 chr20 30638504 30638806 -41515076 - AluSx SINE Alu -1 311 2 1374 281 92 76 chr20 30638806 30639659 -41514223 - L1MEd LINE L1 -3362 2767 1896 307 252 17 61 chr20 30639748 30639863 -41514019 + L1MC4 LINE L1 6582 6691 -1351 361 298 43 60 chr20 30639912 30640657 -41513225 - L1MEd LINE L1 -837 1653 834 390 91 0 0 chr20 30640714 30640769 -41513113 + (TTTTC)n Simple_repeat Simple_repeat 4 58 0 741 204 74 11 chr20 30640959 30641135 -41512747 + MER5A DNA MER1_type 1 187 -2 364 310 76 83 chr20 30641439 30641599 -41512283 - L1MEd LINE L1 -5248 871 711 1231 213 47 89 chr20 30641599 30641980 -41511902 - MLT1A1 LTR MaLR 0 365 1 364 310 76 83 chr20 30641980 30642277 -41511605 - L1MEd LINE L1 -5408 711 417 268 153 14 28 chr20 30642527 30642599 -41511283 + (TGG)n Simple_repeat Simple_repeat 3 73 0 1437 224 56 0 chr20 30642617 30642939 -41510943 - MER58B DNA MER1_type -1 340 1 344 344 0 0 chr20 30642942 30643067 -41510815 + (TGG)n Simple_repeat Simple_repeat 3 127 0 561 231 0 0 chr20 30643087 30643260 -41510622 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 2108 115 0 13 chr20 30644019 30644333 -41509549 - AluSx SINE Alu -2 310 1 1642 182 146 42 chr20 30645425 30645858 -41508024 + L1MB7 LINE L1 5707 6184 0 328 289 70 6 chr20 30646851 30647007 -41506875 - LTR16C LTR ERVL -188 303 138 1478 168 212 22 chr20 30647079 30647442 -41506440 - MSTB1 LTR MaLR 0 432 1 2423 128 87 17 chr20 30648705 30649120 -41504762 - MER65A LTR ERV1 0 445 2 286 226 89 57 chr20 30650476 30650600 -41503282 - L1MC5 LINE L1 -50 7911 7784 296 177 21 94 chr20 30651180 30651276 -41502606 - L1MC5 LINE L1 -166 7795 7707 7165 194 41 22 chr20 30651339 30652987 -41500895 - L1MB3 LINE L1 -26 6157 4442 1934 125 0 11 chr20 30652987 30653305 -41500577 - AluSx SINE Alu 0 315 1 7165 194 41 22 chr20 30653305 30654236 -41499646 - L1MB3 LINE L1 -1741 4442 3530 288 338 138 0 chr20 30654290 30654435 -41499447 - MIR3 SINE MIR -12 196 32 434 204 220 23 chr20 30655544 30655676 -41498206 - MER5A DNA MER1_type -6 183 26 751 194 34 53 chr20 30659531 30659737 -41494145 - MLT1H LTR MaLR 0 549 348 184 274 171 34 chr20 30661351 30661468 -41492414 - MIR3 SINE MIR -62 146 14 284 303 22 34 chr20 30661697 30661875 -41492007 + HAL1 LINE L1 814 989 -1518 569 236 67 24 chr20 30661925 30662133 -41491749 - L1M4 LINE L1 -1981 4976 4760 3885 136 18 37 chr20 30662150 30662654 -41491228 - L1MA5A LINE L1 0 6297 5802 3738 188 92 5 chr20 30662654 30663414 -41490468 - LTR1B LTR ERV1 0 826 1 3885 136 18 37 chr20 30663414 30663640 -41490242 - L1MA5A LINE L1 -495 5802 5573 3086 259 66 32 chr20 30663696 30663736 -41490146 - L1M4 LINE L1 -2259 4698 4661 2469 37 0 7 chr20 30663736 30664033 -41489849 - AluY SINE Alu -16 295 1 3086 259 66 32 chr20 30664033 30665427 -41488455 - L1M4 LINE L1 -2296 4661 3215 614 128 32 0 chr20 30665435 30665529 -41488353 - LOR1a LTR ERV1 0 497 401 39493 37 4 2 chr20 30665537 30671094 -41482788 - L1PA3 LINE L1 -7 6463 893 626 140 0 0 chr20 30671061 30671154 -41482728 - L1PA3 LINE L1 -6365 96 4 * 2014 182 39 0 chr20 30671159 30671522 -41482360 - LOR1b LTR ERV1 -84 377 1 723 261 117 37 chr20 30671522 30672165 -41481717 - L1M4 LINE L1 -3750 3207 2565 * 1902 167 85 38 chr20 30672159 30672601 -41481281 + L1MA4A LINE L1 5570 6063 -111 734 232 0 11 chr20 30672502 30672679 -41481203 + L1PB4 LINE L1 5980 6154 -2 * 1515 252 71 92 chr20 30672775 30673287 -41480595 - L1M4 LINE L1 -4568 2391 1870 1590 88 22 9 chr20 30673287 30673514 -41480368 - AluSg/x SINE Alu -2 310 81 1515 252 71 92 chr20 30673514 30674216 -41479666 - L1M4 LINE L1 -5089 1870 1188 333 290 43 43 chr20 30674286 30674448 -41479434 - L1M4 LINE L1 -5667 1188 1027 284 279 107 25 chr20 30674771 30674968 -41478914 - L1M4 LINE L1 -6635 224 12 365 261 140 71 chr20 30675389 30675711 -41478171 + MARNA DNA Mariner 202 545 -41 3094 139 8 33 chr20 30676494 30676831 -41477051 + LOR1a LTR ERV1 1 322 -175 1515 190 14 20 chr20 30676831 30677126 -41476756 - AluJb SINE Alu -18 294 2 3094 139 8 33 chr20 30677126 30677298 -41476584 + LOR1a LTR ERV1 322 497 0 301 302 47 31 chr20 30678959 30679151 -41474731 + L2 LINE L2 2836 3030 -283 298 259 149 58 chr20 30679206 30679380 -41474502 - LTR16A1 LTR ERVL 0 457 268 187 242 330 0 chr20 30679989 30680080 -41473802 - MER5A DNA MER1_type -9 180 60 1789 153 88 16 chr20 30680279 30680599 -41473283 - MER61A LTR ERV1 0 343 1 2169 110 0 22 chr20 30681075 30681394 -41472488 + AluSx SINE Alu 1 312 0 213 298 214 0 chr20 30682730 30682814 -41471068 - MIR SINE MIR -159 103 2 286 270 25 125 chr20 30682960 30683160 -41470722 + L1MC4 LINE L1 7836 8015 -27 3214 223 79 34 chr20 30683382 30684630 -41469252 + L1MD2 LINE L1 4995 6303 -56 263 83 0 0 chr20 30684600 30684636 -41469246 + L1MC3 LINE L1 7701 7736 -49 * 278 155 35 0 chr20 30684638 30684696 -41469186 + L1MD3 LINE L1 7918 7977 -18 293 224 35 0 chr20 30684698 30684783 -41469099 + (TA)n Simple_repeat Simple_repeat 2 89 0 2561 149 12 21 chr20 30685035 30685465 -41468417 + LOR1b LTR ERV1 34 459 -2 536 253 96 27 chr20 30685928 30686113 -41467769 + L1MD2 LINE L1 5841 6034 -132 315 245 56 1 chr20 30687303 30687407 -41466475 + LTR16C LTR ERVL 346 475 -2 1755 143 0 38 chr20 30687419 30687753 -41466129 + AluSx SINE Alu 1 323 0 691 266 98 48 chr20 30691260 30691388 -41462494 - L2 LINE L2 -2 3311 3191 2206 98 3 0 chr20 30691388 30691693 -41462189 + AluSx SINE Alu 5 310 -2 691 266 98 48 chr20 30691693 30691982 -41461900 - L2 LINE L2 -122 3191 2873 4200 147 12 18 chr20 30692024 30692745 -41461137 - LTR62 LTR ERVK -2 717 1 421 304 72 6 chr20 30692750 30692931 -41460951 + MER3 DNA MER1_type 1 193 -16 1730 157 7 0 chr20 30693622 30693928 -41459954 - AluSx SINE Alu 0 312 5 228 252 65 44 chr20 30694406 30694508 -41459374 + MIR SINE MIR 51 153 -67 209 117 67 100 chr20 30696939 30696999 -41456883 - MER5B DNA MER1_type 0 178 121 1436 169 18 11 chr20 30697001 30697274 -41456608 + L1PA13 LINE L1 5889 6163 0 430 258 42 0 chr20 30701698 30701818 -41452064 + MER5A DNA MER1_type 47 171 -18 345 317 24 8 chr20 30702431 30702554 -41451328 - MIR SINE MIR -66 196 72 318 272 105 18 chr20 30703126 30703240 -41450642 - L2 LINE L2 0 3313 3190 25 31 0 0 chr20 30703492 30703524 -41450358 + GC_rich Low_complexity Low_complexity 1 32 0 384 226 117 7 chr20 30704202 30704303 -41449579 + L1ME3A LINE L1 6009 6132 -32 261 0 0 0 chr20 30704303 30704332 -41449550 + (TG)n Simple_repeat Simple_repeat 1 29 0 384 226 117 7 chr20 30704332 30704367 -41449515 + L1ME3A LINE L1 6132 6162 -2 1036 170 87 26 chr20 30704386 30704616 -41449266 + AluJo SINE Alu 38 281 -31 475 279 39 73 chr20 30704630 30704863 -41449019 - L2 LINE L2 -1484 1830 1606 192 250 92 0 chr20 30704945 30705021 -41448861 - MIR SINE MIR -125 137 55 21 0 0 0 chr20 30705829 30705850 -41448032 + AT_rich Low_complexity Low_complexity 1 21 0 1589 167 7 4 chr20 30705850 30706126 -41447756 - AluJo SINE Alu -25 287 11 11282 201 37 4 chr20 30706293 30709504 -41444378 - L1PA15 LINE L1 -17 6148 2827 1967 138 0 0 chr20 30709605 30709902 -41443980 - AluSx SINE Alu -15 297 1 368 284 0 0 chr20 30711467 30711555 -41442327 - MIR SINE MIR -50 212 125 253 302 76 58 chr20 30711617 30711789 -41442093 - MIR SINE MIR -31 231 57 4749 160 26 11 chr20 30712027 30713279 -41440603 + L1MA4A LINE L1 4955 6282 -21 2319 110 0 25 chr20 30713821 30714138 -41439744 - AluSq SINE Alu -4 309 1 1197 277 84 7 chr20 30714260 30714809 -41439073 - L1MDa LINE L1 -2191 4349 3759 348 315 20 5 chr20 30714961 30715164 -41438718 - L1MDa LINE L1 -4466 2074 1869 22 35 0 0 chr20 30715199 30715228 -41438654 + AT_rich Low_complexity Low_complexity 1 29 0 313 256 75 15 chr20 30715321 30715454 -41438428 - L1MDa LINE L1 -5269 1261 1121 249 270 16 16 chr20 30716640 30716703 -41437179 - LTR16C LTR ERVL -286 205 143 4381 113 13 6 chr20 30717453 30718084 -41435798 + MER41B LTR ERV1 1 635 0 2291 118 0 3 chr20 30720301 30720614 -41433268 + AluSx SINE Alu 1 312 0 2167 89 32 0 chr20 30721417 30721698 -41432184 - AluSx SINE Alu -18 294 5 2999 183 8 6 chr20 30726064 30726583 -41427299 - ERVL LTR ERVL -3952 1812 1293 643 319 39 4 chr20 30727167 30727396 -41426486 + LTR16C LTR ERVL 255 491 0 2089 200 126 12 chr20 30728620 30729119 -41424763 + L1MC3 LINE L1 6176 6731 -1054 794 246 44 79 chr20 30729162 30729479 -41424403 + MLT1D LTR MaLR 34 339 -166 1030 133 13 286 chr20 30729479 30729759 -41424123 + L1MC3 LINE L1 7283 7276 -509 965 103 23 0 chr20 30729759 30729934 -41423948 + (CA)n Simple_repeat Simple_repeat 1 179 0 1030 133 13 286 chr20 30729934 30730324 -41423558 + L1MC3 LINE L1 7275 7770 -15 3514 146 59 42 chr20 30730328 30730854 -41423028 - L1MA6 LINE L1 -329 5971 5413 1395 167 4 4 chr20 30730854 30731124 -41422758 - L1MA4 LINE L1 -4 6296 6027 3514 146 59 42 chr20 30731124 30731346 -41422536 - L1MA6 LINE L1 -887 5413 5196 1993 146 3 6 chr20 30731347 30731670 -41422212 + L1MA6 LINE L1 5979 6300 0 24 0 0 0 chr20 30733226 30733250 -41420632 + AT_rich Low_complexity Low_complexity 1 24 0 1474 160 71 8 chr20 30733268 30733536 -41420346 + AluJo SINE Alu 12 296 -16 183 356 62 6 chr20 30733549 30733709 -41420173 - MIR SINE MIR -12 250 82 951 280 84 27 chr20 30734146 30734774 -41419108 + L2 LINE L2 2342 3005 -308 365 328 51 6 chr20 30735421 30735598 -41418284 + L2 LINE L2 3114 3298 -15 829 272 129 50 chr20 30735778 30736277 -41417605 - MLT1G3 LTR MaLR 0 595 67 1413 194 31 10 chr20 30736283 30736577 -41417305 + L1MC3 LINE L1 7485 7784 -1 274 254 0 0 chr20 30736582 30736645 -41417237 - MLT1G3 LTR MaLR -532 63 1 686 242 240 28 chr20 30737133 30737591 -41416291 + MLT1H1 LTR MaLR 1 555 0 1974 123 0 0 chr20 30737856 30738132 -41415750 - AluSx SINE Alu -7 305 30 1949 151 0 25 chr20 30738348 30738665 -41415217 - AluJb SINE Alu -3 309 1 7766 160 17 3 chr20 30738822 30741068 -41412814 + L1PA13 LINE L1 3929 6156 -7 24 53 0 0 chr20 30741086 30741124 -41412758 + AT_rich Low_complexity Low_complexity 1 38 0 229 362 82 45 chr20 30741311 30741554 -41412328 - L2 LINE L2 -72 3200 2949 759 226 11 117 chr20 30741698 30741931 -41411951 + MER33 DNA MER1_type 4 187 -2398 1664 160 64 3 chr20 30741931 30742213 -41411669 + AluJb SINE Alu 4 302 -10 759 226 11 117 chr20 30742213 30742337 -41411545 + MER33 DNA MER1_type 187 323 -1 2023 136 7 7 chr20 30742832 30743141 -41410741 - AluSx SINE Alu -3 309 1 2609 59 0 0 chr20 30743626 30743932 -41409950 + AluY SINE Alu 1 306 -5 2064 105 3 40 chr20 30743935 30744257 -41409625 + AluSq SINE Alu 1 311 0 280 264 109 9 chr20 30744294 30744404 -41409478 - MIR SINE MIR -64 198 78 1312 260 39 39 chr20 30745195 30745583 -41408299 + MSTD LTR MaLR 1 388 -8 265 100 0 25 chr20 30745592 30745632 -41408250 + MSTD-int LTR MaLR 5 43 -1328 256 224 13 13 chr20 30745642 30745718 -41408164 + L1MA7 LINE L1 6214 6289 -2 415 330 43 54 chr20 30747730 30748126 -41405756 - L1M4 LINE L1 -1808 4338 3946 297 0 0 0 chr20 30748126 30748159 -41405723 + (CA)n Simple_repeat Simple_repeat 2 34 0 415 330 43 54 chr20 30748159 30748228 -41405654 - L1M4 LINE L1 -2200 3946 3878 1240 157 72 110 chr20 30748274 30748593 -41405289 - AluJb SINE Alu -5 307 1 269 273 0 0 chr20 30749110 30749187 -41404695 - L1M4 LINE L1 -3132 3014 2938 1512 183 21 21 chr20 30749214 30749504 -41404378 - AluJb SINE Alu -22 290 1 3928 168 50 28 chr20 30752386 30753131 -41400751 - LTR39 LTR ERV1 -22 761 1 469 290 102 29 chr20 30753453 30753698 -41400184 - L1ME1 LINE L1 -5 6161 5899 1495 232 24 42 chr20 30753706 30754116 -41399766 - L1ME1 LINE L1 -317 5847 5445 201 333 26 48 chr20 30754331 30754562 -41399320 - L2 LINE L2 -181 3091 2866 193 239 0 0 chr20 30754676 30754722 -41399160 + L2 LINE L2 3268 3313 0 184 296 185 19 chr20 30755091 30755199 -41398683 - L2 LINE L2 -5 3267 3142 2131 150 18 0 chr20 30755222 30755562 -41398320 + L1PA16 LINE L1 5812 6157 -9 590 39 0 13 chr20 30755569 30755647 -41398235 + (GGAAA)n Simple_repeat Simple_repeat 3 79 0 744 284 37 21 chr20 30756069 30756459 -41397423 - MLT1H1 LTR MaLR 0 555 115 416 270 77 40 chr20 30756883 30757105 -41396777 - L1ME3 LINE L1 -149 6013 5784 732 344 50 3 chr20 30757285 30757648 -41396234 + LTR16C LTR ERVL 106 485 -6 252 0 0 0 chr20 30757792 30757820 -41396062 + (TG)n Simple_repeat Simple_repeat 2 29 0 2099 119 7 23 chr20 30758471 30758773 -41395109 + AluSx SINE Alu 2 298 -14 1141 276 141 34 chr20 30758774 30759432 -41394450 + L1ME3A LINE L1 5276 6006 -164 236 218 0 39 chr20 30759844 30759922 -41393960 - L1ME3 LINE L1 -965 5181 5107 317 273 53 8 chr20 30764272 30764404 -41389478 + MIR SINE MIR 5 142 -120 1384 198 101 28 chr20 30764509 30764945 -41388937 - Charlie1 DNA MER1_type -24 2737 3 1229 262 146 8 chr20 30766777 30767262 -41386620 - MER69 DNA AcHobo -8 2518 1967 3052 157 31 15 chr20 30768219 30768742 -41385140 - LTR26B LTR ERV1 0 531 1 310 195 0 49 chr20 30768808 30768890 -41384992 + L1ME1 LINE L1 5785 5862 -304 847 273 50 8 chr20 30768899 30769159 -41384723 - L1M4b LINE L1 -6577 282 12 225 303 147 0 chr20 30769647 30769756 -41384126 - L1ME3 LINE L1 -2313 3833 3709 382 325 60 8 chr20 30769823 30770072 -41383810 - L1ME3 LINE L1 -3506 2640 2379 926 208 43 31 chr20 30770959 30771214 -41382668 + L1MC4a LINE L1 7152 7409 -399 1609 274 54 53 chr20 30771347 30772150 -41381732 - L1ME3 LINE L1 -98 6064 5254 197 193 0 18 chr20 30772161 30772218 -41381664 + (TA)n Simple_repeat Simple_repeat 2 57 0 228 246 0 16 chr20 30772223 30772284 -41381598 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 450 276 0 0 chr20 30772289 30772463 -41381419 + (TATG)n Simple_repeat Simple_repeat 2 175 0 433 261 4 19 chr20 30772465 30772536 -41381346 + (TATATG)n Simple_repeat Simple_repeat 1 72 -540 2786 90 0 0 chr20 30772536 30772891 -41380991 + THE1A LTR MaLR 1 355 0 433 261 4 19 chr20 30772891 30773087 -41380795 + (TATATG)n Simple_repeat Simple_repeat 72 612 0 357 241 0 43 chr20 30773107 30773223 -41380659 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 499 243 0 11 chr20 30773224 30773405 -41380477 + (TG)n Simple_repeat Simple_repeat 2 180 0 499 247 0 11 chr20 30773439 30773621 -41380261 + (TG)n Simple_repeat Simple_repeat 1 180 0 2878 125 3 1 chr20 30774906 30775457 -41378425 + L1M1 LINE L1 5109 5659 -646 401 300 78 28 chr20 30775514 30775694 -41378188 + LTR33 LTR ERVL 11 199 -322 622 218 0 0 chr20 30778480 30778590 -41375292 - FLAM_C SINE Alu -32 111 2 298 314 151 21 chr20 30779781 30780166 -41373716 - L2 LINE L2 -1078 2236 1802 287 65 22 0 chr20 30780266 30780312 -41373570 + (TG)n Simple_repeat Simple_repeat 1 47 0 1691 188 93 14 chr20 30781281 30781648 -41372234 + MSTD LTR MaLR 1 396 0 242 292 49 42 chr20 30782211 30782355 -41371527 - MER5A DNA MER1_type -38 151 7 218 303 114 0 chr20 30782481 30782613 -41371269 + MIR SINE MIR 110 256 -6 186 43 0 0 chr20 30782786 30782809 -41371073 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 268 331 48 0 chr20 30783679 30783824 -41370058 + MER5B DNA MER1_type 13 164 -14 283 225 99 18 chr20 30783842 30783953 -41369929 + MER5B DNA MER1_type 6 125 -53 338 214 87 95 chr20 30784014 30784140 -41369742 - MER63 DNA MER1_type -311 751 1 359 301 115 19 chr20 30785003 30785212 -41368670 + MIR SINE MIR 14 242 -20 267 146 0 0 chr20 30785502 30785543 -41368339 + LTR33 LTR ERVL 104 144 -377 34 0 0 0 chr20 30785905 30785939 -41367943 + AT_rich Low_complexity Low_complexity 1 34 0 376 267 25 17 chr20 30788538 30788658 -41365224 + GA-rich Low_complexity Low_complexity 1 121 0 210 320 0 0 chr20 30789335 30789410 -41364472 + MIR SINE MIR 152 226 -36 27989 61 5 5 chr20 30791366 30795760 -41358122 - HAL1b LINE L1 -8 6146 390 322 243 28 133 chr20 30796555 30796917 -41356965 - L1M4 LINE L1 -1455 4691 4368 309 68 0 0 chr20 30797465 30797509 -41356373 + (TG)n Simple_repeat Simple_repeat 2 45 0 5398 199 66 25 chr20 30797812 30799960 -41353922 - L1MB7 LINE L1 -9 6175 3943 1933 131 55 7 chr20 30800045 30800335 -41353547 - AluSx SINE Alu 0 312 9 22 35 0 0 chr20 30800492 30800521 -41353361 + AT_rich Low_complexity Low_complexity 1 29 0 198 208 0 0 chr20 30801694 30801747 -41352135 + GA-rich Low_complexity Low_complexity 1 53 0 368 261 18 9 chr20 30802666 30802777 -41351105 + MIR SINE MIR 30 141 -67 256 188 0 0 chr20 30803886 30803934 -41349948 - MLT1H LTR MaLR 0 549 502 1515 97 0 5 chr20 30803934 30804129 -41349753 + AluSc SINE Alu 96 289 -20 668 257 171 32 chr20 30805019 30805365 -41348517 - LTR16C LTR ERVL -2 489 96 1487 190 7 7 chr20 30805465 30805770 -41348112 + L1MB5 LINE L1 5851 6155 -19 602 265 18 0 chr20 30807261 30807431 -41346451 - MER5B DNA MER1_type -2 176 4 309 297 51 0 chr20 30807646 30807764 -41346118 + MIR SINE MIR 30 153 -55 955 169 0 13 chr20 30808273 30808427 -41345455 + FRAM SINE Alu 1 151 -25 22 35 0 0 chr20 30808434 30808463 -41345419 + AT_rich Low_complexity Low_complexity 1 29 0 422 314 53 14 chr20 30808507 30808714 -41345168 + MIR SINE MIR 15 229 -33 6620 123 17 29 chr20 30809909 30810993 -41342889 + MER11C LTR ERVK 1 1071 0 649 266 173 20 chr20 30811520 30811914 -41341968 + LTR16A1 LTR ERVL 3 456 -1 1609 198 43 6 chr20 30812927 30813255 -41340627 - MER58B DNA MER1_type 0 341 2 323 224 30 82 chr20 30813336 30813470 -41340412 + L1ME4a LINE L1 5973 6099 -22 25 0 0 0 chr20 30813473 30813498 -41340384 + AT_rich Low_complexity Low_complexity 1 25 0 309 270 128 96 chr20 30814487 30814832 -41339050 - L2 LINE L2 -2 3270 2915 26 30 0 0 chr20 30816290 30816323 -41337559 + AT_rich Low_complexity Low_complexity 1 33 0 372 209 0 0 chr20 30816428 30816519 -41337363 + CT-rich Low_complexity Low_complexity 3 93 0 207 293 17 17 chr20 30816623 30816681 -41337201 - L2 LINE L2 -28 3285 3228 4453 179 31 7 chr20 30817000 30817880 -41336002 - MER54A LTR ERVL 0 901 1 1224 181 0 22 chr20 30817961 30818193 -41335689 + AluJo SINE Alu 37 263 -49 989 168 0 59 chr20 30818998 30819201 -41334681 + AluJb SINE Alu 122 312 0 1287 130 51 24 chr20 30819260 30819514 -41334368 - L1MA8 LINE L1 -4 6287 6027 26 64 0 0 chr20 30819832 30819879 -41334003 + AT_rich Low_complexity Low_complexity 1 47 0 318 241 35 26 chr20 30820107 30820223 -41333659 - MLT1J2 LTR MaLR -242 208 92 873 170 44 10 chr20 30820223 30820429 -41333453 + L1MC/D LINE L1 5306 5518 -815 1834 151 84 53 chr20 30820498 30820914 -41332968 + MSTB1 LTR MaLR 4 432 0 312 239 15 15 chr20 30820938 30821005 -41332877 - L2 LINE L2 -4 3268 3202 226 315 33 11 chr20 30821000 30821092 -41332790 - MIR SINE MIR -103 159 66 * 306 270 31 31 chr20 30822089 30822248 -41331634 + L1MEc LINE L1 707 865 -5531 1670 168 78 32 chr20 30822255 30822625 -41331257 + L1ME LINE L1 631 1017 -5409 3378 150 43 15 chr20 30822626 30823232 -41330650 + L1MC1 LINE L1 5700 6322 -11 332 254 75 29 chr20 30823292 30823465 -41330417 + L1ME LINE L1 1047 1227 -5189 1110 303 94 26 chr20 30823476 30824361 -41329521 + L1ME LINE L1 1193 2295 -4312 255 244 32 16 chr20 30824509 30824632 -41329250 + (TA)n Simple_repeat Simple_repeat 1 125 0 794 110 87 0 chr20 30824737 30824864 -41329018 + MER85 DNA T2_type 2 139 0 296 143 12 48 chr20 30824891 30824975 -41328907 + HAL1 LINE L1 981 1061 -1446 776 343 62 63 chr20 30827405 30828105 -41325777 + L1ME LINE L1 4502 5201 -1225 1353 242 104 13 chr20 30828105 30828568 -41325314 + MLT1D LTR MaLR 1 505 0 776 343 62 63 chr20 30828568 30828665 -41325217 + L1ME LINE L1 5201 5297 -1129 198 0 0 0 chr20 30828665 30828687 -41325195 + (CA)n Simple_repeat Simple_repeat 2 23 0 776 343 62 63 chr20 30828687 30829059 -41324823 + L1ME LINE L1 5297 5671 -755 2262 78 0 13 chr20 30829643 30829950 -41323932 - AluY SINE Alu -8 303 1 228 286 19 38 chr20 30830134 30830239 -41323643 + L1ME LINE L1 5957 6059 -342 297 0 0 0 chr20 30830268 30830301 -41323581 + (TG)n Simple_repeat Simple_repeat 1 33 0 249 108 0 0 chr20 30830357 30830394 -41323488 + (TG)n Simple_repeat Simple_repeat 1 37 0 321 26 0 0 chr20 30830454 30830492 -41323390 + (TG)n Simple_repeat Simple_repeat 1 38 0 302 331 261 0 chr20 30830941 30831083 -41322799 + MIR SINE MIR 49 227 -35 1076 224 0 14 chr20 30831128 30831338 -41322544 + MER58A DNA MER1_type 3 209 -15 360 274 131 29 chr20 30831650 30831825 -41322057 - MLT1L LTR MaLR -2 613 421 240 287 30 40 chr20 30831987 30832088 -41321794 - MLT1J LTR MaLR -310 201 102 207 100 0 0 chr20 30832091 30832121 -41321761 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 274 235 88 0 chr20 30834450 30834518 -41319364 - L2 LINE L2 -1 3271 3198 752 271 188 25 chr20 30834569 30834995 -41318887 - MLT1G1 LTR MaLR 0 595 34 266 279 29 58 chr20 30834971 30835075 -41318807 - MLT1G1 LTR MaLR -494 101 1 * 231 307 211 18 chr20 30835630 30835744 -41318138 - MIR SINE MIR -78 184 49 185 389 56 6 chr20 30836952 30837114 -41316768 + MIR SINE MIR 34 203 -59 1480 247 133 22 chr20 30837684 30838239 -41315643 - MLT1E3 LTR MaLR -7 617 1 3549 162 119 8 chr20 30838973 30839677 -41314205 - LTR39 LTR ERV1 0 783 2 1262 173 85 74 chr20 30842567 30843108 -41310774 - LTR36 LTR ERV1 -4 607 1 4332 191 42 12 chr20 30843732 30844665 -41309217 - L1MB3 LINE L1 -2 6181 5223 2004 117 0 0 chr20 30844710 30844991 -41308891 - AluSx SINE Alu -31 281 1 649 254 0 23 chr20 30844991 30845168 -41308714 - L1MB3 LINE L1 -878 5268 5096 187 347 59 36 chr20 30846162 30846384 -41307498 - L3 LINE CR1 -765 812 586 412 238 9 0 chr20 30846418 30846639 -41307243 + (CA)n Simple_repeat Simple_repeat 1 223 0 648 325 122 44 chr20 30847153 30848346 -41305536 + L2 LINE L2 2013 3311 -2 585 191 10 126 chr20 30848384 30848583 -41305299 - MER5B DNA MER1_type -2 176 1 979 245 138 11 chr20 30848662 30849038 -41304844 - MER110 LTR ERV1 -67 424 1 183 310 159 35 chr20 30850104 30850217 -41303665 + L2 LINE L2 3141 3267 -5 198 0 0 0 chr20 30850606 30850628 -41303254 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 191 273 57 85 chr20 30851065 30851170 -41302712 - MIR SINE MIR -57 205 99 342 0 0 0 chr20 30851170 30851208 -41302674 + (TC)n Simple_repeat Simple_repeat 1 38 0 216 0 0 0 chr20 30851207 30851231 -41302651 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 191 273 57 85 chr20 30851208 30851301 -41302581 - MIR SINE MIR -163 99 35 430 277 59 70 chr20 30851497 30851768 -41302114 - LTR16A1 LTR ERVL 0 457 190 206 336 48 62 chr20 30852081 30852227 -41301655 + L3b LINE CR1 1146 1289 -294 731 210 22 0 chr20 30855244 30855382 -41298500 + FLAM_C SINE Alu 2 142 -1 758 169 0 0 chr20 30855402 30855520 -41298362 - FLAM_A SINE Alu -13 129 12 1142 204 83 45 chr20 30855556 30855869 -41298013 + MLT1A2 LTR MaLR 1 325 -49 267 343 56 28 chr20 30859586 30859729 -41294153 - MIR SINE MIR -114 148 2 765 213 101 62 chr20 30860558 30861048 -41292834 + MLT1H LTR MaLR 3 549 0 312 235 17 96 chr20 30861158 30861273 -41292609 + MIR3 SINE MIR 88 193 -15 1619 161 36 4 chr20 30861829 30862108 -41291774 + AluJb SINE Alu 1 288 -24 533 49 0 37 chr20 30862108 30862189 -41291693 + L1PA11 LINE L1 6097 6174 0 315 0 0 0 chr20 30862644 30862679 -41291203 + (TG)n Simple_repeat Simple_repeat 2 36 0 576 54 0 0 chr20 30862703 30862777 -41291105 - Alu SINE Alu -4 306 233 220 340 109 20 chr20 30862886 30863033 -41290849 + MIR SINE MIR 13 172 -90 25 83 0 0 chr20 30864382 30864442 -41289440 + GC_rich Low_complexity Low_complexity 1 60 0 241 265 0 20 chr20 30864443 30864541 -41289341 + G-rich Low_complexity Low_complexity 3 98 0 24 32 0 0 chr20 30864640 30864671 -41289211 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 30866475 30866502 -41287380 + (A)n Simple_repeat Simple_repeat 1 27 0 540 171 51 0 chr20 30866691 30866808 -41287074 + L1MA7 LINE L1 6158 6280 -11 249 322 25 25 chr20 30868757 30868852 -41285030 - MIR SINE MIR -78 130 33 2058 128 0 0 chr20 30870736 30871033 -41282849 - AluSx SINE Alu -15 297 1 2199 92 0 10 chr20 30871258 30871572 -41282310 + AluY SINE Alu 1 311 0 252 59 0 0 chr20 30875902 30875936 -41277946 + (TG)n Simple_repeat Simple_repeat 2 35 0 248 370 78 7 chr20 30876245 30876399 -41277483 + MIR3 SINE MIR 30 194 -14 3793 203 45 16 chr20 30876933 30878108 -41275774 - L1MB8 LINE L1 0 6989 5788 * 3955 242 37 15 chr20 30878099 30879547 -41274335 - L1MB8 LINE L1 -5344 1515 11 266 256 162 34 chr20 30880200 30880317 -41273565 + MIR3 SINE MIR 12 143 -65 548 194 32 8 chr20 30881476 30881600 -41272282 - L1MA4A LINE L1 -10 6293 6167 341 261 140 25 chr20 30881610 30881767 -41272115 - MIR SINE MIR -74 188 14 370 270 61 71 chr20 30881894 30882090 -41271792 + MIR SINE MIR 69 262 0 210 91 0 0 chr20 30882805 30882838 -41271044 + (GA)n Simple_repeat Simple_repeat 2 34 0 228 341 55 75 chr20 30883347 30883684 -41270198 + L2 LINE L2 2741 3075 -238 354 224 0 0 chr20 30884141 30884226 -41269656 + CT-rich Low_complexity Low_complexity 2 86 0 4069 208 41 26 chr20 30884231 30885973 -41267909 - L1MC3 LINE L1 -743 5403 4457 243 304 7 82 chr20 30886868 30887003 -41266879 - L2 LINE L2 -205 3067 2943 4547 109 9 3 chr20 30887043 30887674 -41266208 + MER41B LTR ERV1 1 635 0 265 281 10 73 chr20 30889230 30889326 -41264556 - L2 LINE L2 0 3272 3183 238 367 144 16 chr20 30889529 30889842 -41264040 - L2 LINE L2 -412 2902 2550 360 155 0 0 chr20 30889862 30889933 -41263949 + G-rich Low_complexity Low_complexity 2 72 0 239 326 39 31 chr20 30892892 30893021 -41260861 + MIR SINE MIR 17 146 -62 654 238 21 0 chr20 30893068 30893211 -41260671 - MIR SINE MIR -20 242 97 717 195 8 0 chr20 30893314 30893442 -41260440 + FLAM_C SINE Alu 2 130 -3 1549 247 93 92 chr20 30893520 30894098 -41259784 - MLT1H1 LTR MaLR -4 591 13 1428 161 218 0 chr20 30894138 30894436 -41259446 - MER47A DNA MER2_type 0 366 4 290 244 67 0 chr20 30894438 30894528 -41259354 + MER112 DNA MER1_type 133 228 -32 415 195 34 31 chr20 30894591 30894769 -41259113 - L1MA9 LINE L1 -4 6287 5994 1335 167 6 74 chr20 30896671 30896983 -41256899 + AluJo SINE Alu 3 293 -19 775 306 74 16 chr20 30897065 30897388 -41256494 - LTR16C LTR ERVL 0 491 150 1240 231 104 78 chr20 30898276 30898748 -41255134 - MLT1H LTR MaLR 0 549 66 616 198 17 0 chr20 30898775 30898891 -41254991 + MLT1H LTR MaLR 431 548 -1 715 307 109 25 chr20 30898893 30899297 -41254585 - LTR16C LTR ERVL 0 491 54 406 320 38 55 chr20 30899435 30899726 -41254156 - L3b LINE CR1 -187 1396 1111 324 317 62 29 chr20 30900226 30900434 -41253448 + L3 LINE CR1 1188 1402 -175 267 367 61 22 chr20 30900597 30900777 -41253105 + MIR3 SINE MIR 3 189 -19 214 307 61 35 chr20 30901240 30901354 -41252528 + MIR3 SINE MIR 11 127 -81 1233 191 72 0 chr20 30901725 30902020 -41251862 - AluJo SINE Alu 0 314 1 258 321 40 18 chr20 30903260 30903484 -41250398 - L1ME LINE L1 -224 5897 5669 867 227 40 82 chr20 30904065 30904369 -41249513 - LTR16C LTR ERVL -51 440 150 1078 192 56 83 chr20 30904888 30905274 -41248608 - MLT2B2 LTR ERVL -52 362 3 21703 163 22 42 chr20 30905276 30905547 -41248335 - ERVL-B2 LTR ERVL -7 5757 5482 1602 165 3 30 chr20 30905547 30905844 -41248038 + AluJb SINE Alu 1 289 -23 21703 163 22 42 chr20 30905844 30909602 -41244280 - ERVL-B2 LTR ERVL -282 5482 1811 181 191 111 16 chr20 30912155 30912218 -41241664 + MIR SINE MIR 133 201 -61 920 130 26 1 chr20 30913384 30913556 -41240326 + L1PA16 LINE L1 5299 5490 -675 295 178 0 0 chr20 30913556 30913601 -41240281 + AluJ/FRAM SINE Alu 229 273 -29 3918 176 14 13 chr20 30913617 30914305 -41239577 + L1PA16 LINE L1 5476 6164 -2 216 86 0 0 chr20 30915272 30915307 -41238575 + (TG)n Simple_repeat Simple_repeat 2 36 0 1188 157 40 0 chr20 30916140 30916338 -41237544 + LTR39 LTR ERV1 1 206 -577 186 43 0 0 chr20 30916520 30916543 -41237339 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2076 18 0 0 chr20 30916604 30916832 -41237050 + AluYa5 SINE Alu 79 306 -5 6748 96 11 1 chr20 30916960 30918788 -41235094 - L1PA11 LINE L1 0 6174 4327 3662 128 7 2 chr20 30918788 30919343 -41234539 + L1PA11 LINE L1 3772 4329 -1817 789 188 34 0 chr20 30919622 30919771 -41234111 + MER5A DNA MER1_type 1 154 -35 381 357 54 79 chr20 30920018 30920708 -41233174 - L2 LINE L2 -7 3265 2584 303 146 0 0 chr20 30921463 30921518 -41232364 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2001 136 69 28 chr20 30921523 30921883 -41231999 + THE1C LTR MaLR 1 375 0 889 177 111 44 chr20 30922207 30922512 -41231370 + MER66A LTR ERV1 97 408 -70 8741 201 93 28 chr20 30922556 30924586 -41229296 + MER66A-int LTR ERV1 3 2164 -4512 6271 210 43 25 chr20 30924579 30925836 -41228046 + MER66A-int LTR ERV1 2336 3621 -3055 * 2076 105 0 11 chr20 30925836 30926162 -41227720 + AluSx SINE Alu 1 323 0 6271 210 43 25 chr20 30926162 30926224 -41227658 + MER66A-int LTR ERV1 3621 3680 -2996 360 203 283 7 chr20 30926204 30926342 -41227540 + MER66-int LTR ERV1 1701 1876 -6244 * 311 267 0 0 chr20 30926332 30926407 -41227475 + MER66-int LTR ERV1 4060 4134 -2542 * 3411 170 45 70 chr20 30926403 30927305 -41226577 + MER66-int LTR ERV1 2411 4941 -1735 1575 155 69 28 chr20 30927280 30927570 -41226312 + MER66-int LTR ERV1 6366 6667 -9 * 251 309 49 0 chr20 30927700 30927781 -41226101 - L2 LINE L2 0 3272 3188 534 231 38 6 chr20 30927807 30927967 -41225915 - Charlie4 DNA MER1_type -49 1912 1748 407 235 59 47 chr20 30927982 30928152 -41225730 - Charlie4 DNA MER1_type -1766 195 24 728 230 88 13 chr20 30928871 30929097 -41224785 + L2 LINE L2 2336 2578 -736 192 311 108 20 chr20 30929754 30929902 -41223980 + L2 LINE L2 1611 1771 -1543 235 390 7 14 chr20 30930292 30930433 -41223449 + L2 LINE L2 2213 2352 -962 627 258 11 39 chr20 30930953 30931131 -41222751 + MER5B DNA MER1_type 3 175 -3 1180 166 0 67 chr20 30931192 30931436 -41222446 - AluJb SINE Alu 0 312 87 1342 231 20 20 chr20 30931441 30931792 -41222090 + L1MCa LINE L1 1177 1527 -5037 1170 189 16 28 chr20 30931995 30932243 -41221639 - LTR52 LTR ERVL -3 418 174 897 199 9 66 chr20 30932240 30932466 -41221416 - LTR52 LTR ERVL -206 215 3 * 995 256 69 11 chr20 30932468 30932832 -41221050 + L1MCa LINE L1 1640 1982 -4763 15356 143 22 18 chr20 30932832 30935242 -41218640 + Tigger1 DNA MER2_type 1 2418 0 995 256 69 11 chr20 30935242 30935407 -41218475 + L1MCa LINE L1 1982 2393 -4352 579 221 23 19 chr20 30935399 30935599 -41218283 + L1MCa LINE L1 1 163 -5882 * 2716 242 46 39 chr20 30935605 30935950 -41217932 + L1MCa LINE L1 2978 3319 -3245 2460 88 0 0 chr20 30935950 30936256 -41217626 + AluSg SINE Alu 1 306 -4 2716 242 46 39 chr20 30936256 30936782 -41217100 + L1MCa LINE L1 3319 3860 -2704 2363 106 0 0 chr20 30936782 30937094 -41216788 + AluSx SINE Alu 1 312 0 2716 242 46 39 chr20 30937094 30937265 -41216617 + L1MCa LINE L1 3860 4028 -2536 4709 137 16 0 chr20 30937274 30937967 -41215915 - L1PA15 LINE L1 -2 6163 5460 820 224 49 26 chr20 30937967 30938231 -41215651 + L1MCa LINE L1 4831 5100 -1464 359 211 11 0 chr20 30938637 30938732 -41215150 + (TA)n Simple_repeat Simple_repeat 2 97 0 436 320 141 0 chr20 30939061 30939267 -41214615 - MIR SINE MIR -12 250 16 211 232 87 73 chr20 30940422 30940507 -41213375 + MIR SINE MIR 11 97 -111 264 289 22 0 chr20 30940876 30940966 -41212916 + MER94 DNA DNA 1 92 -42 604 84 0 0 chr20 30941637 30941720 -41212162 + MLT2A2 LTR ERVL 371 453 0 4088 93 21 12 chr20 30942098 30942668 -41211214 + L1PA16 LINE L1 5583 6157 -9 337 320 82 17 chr20 30942929 30943160 -41210722 - L1MDa LINE L1 -1724 4816 4571 843 262 35 38 chr20 30943309 30943622 -41210260 - LTR16C LTR ERVL -1 490 179 242 272 25 25 chr20 30945626 30945707 -41208175 + L2 LINE L2 3225 3305 -8 456 267 0 0 chr20 30946683 30946773 -41207109 - MER81 DNA DNA -15 99 10 1080 299 49 13 chr20 30949461 30949849 -41204033 + LTR16C LTR ERVL 89 490 -1 322 228 0 0 chr20 30950028 30950085 -41203797 - MER5A DNA MER1_type -123 66 10 2155 133 7 0 chr20 30950117 30950426 -41203456 - AluSx SINE Alu -1 311 1 557 199 64 0 chr20 30950935 30951091 -41202791 - L1MC5 LINE L1 -520 7441 7276 383 299 126 11 chr20 30951114 30951463 -41202419 - L1MC4a LINE L1 -492 7710 7394 451 291 62 19 chr20 30951540 30951750 -41202132 - L1MC4 LINE L1 -995 7047 6829 630 261 108 112 chr20 30951933 30952976 -41200906 - L1MC4a LINE L1 -1352 6850 5812 229 282 39 0 chr20 30952959 30953037 -41200845 - L1MC4a LINE L1 -2379 4161 4081 * 489 219 0 0 chr20 30953592 30953697 -41200185 - L1MC4a LINE L1 -3778 2762 2658 1115 257 66 13 chr20 30953710 30954338 -41199544 - L1MDa LINE L1 -2146 4394 3603 506 273 53 0 chr20 30954342 30954529 -41199353 - L1MDa LINE L1 -3384 3156 2960 3139 144 86 7 chr20 30954529 30955135 -41198747 - L1 LINE L1 -1107 5039 4386 * 6899 208 61 45 chr20 30955110 30957374 -41196508 - L1MDa LINE L1 -4043 2497 21 186 125 0 0 chr20 30957757 30957766 -41196116 + (GGGAGA)n Simple_repeat Simple_repeat 5 13 -23 2378 128 31 17 chr20 30957766 30958125 -41195757 - THE1B LTR MaLR 0 364 1 186 125 0 0 chr20 30958125 30958147 -41195735 + (GGGAGA)n Simple_repeat Simple_repeat 12 36 0 218 276 28 117 chr20 30958520 30958665 -41195217 + MIR3 SINE MIR 13 144 -64 2511 231 48 63 chr20 30959082 30959815 -41194067 - MER72 LTR ERV1 0 722 1 884 257 70 103 chr20 30961049 30961684 -41192198 - MER77 LTR ERV1 -4 601 79 22 0 0 0 chr20 30962334 30962356 -41191526 + AT_rich Low_complexity Low_complexity 1 22 0 561 234 0 0 chr20 30962751 30962909 -41190973 + (TG)n Simple_repeat Simple_repeat 1 158 0 1788 115 4 0 chr20 30964095 30964348 -41189534 + L1PA13 LINE L1 5907 6160 -3 872 167 160 6 chr20 30964746 30964902 -41188980 + AluSx SINE Alu 2 181 -131 301 319 92 32 chr20 30964923 30965108 -41188774 + L1MC4a LINE L1 4064 4259 -1887 538 132 0 0 chr20 30965134 30965210 -41188672 + AluSg/x SINE Alu 198 273 -37 218 260 82 27 chr20 30966554 30966627 -41187255 + MIR SINE MIR 74 150 -112 286 304 116 38 chr20 30967555 30967901 -41185981 + L1MC4a LINE L1 5534 5906 -1902 596 181 60 23 chr20 30968185 30968284 -41185598 - MER65A LTR ERV1 0 445 338 359 21 21 0 chr20 30968284 30968332 -41185550 + (TG)n Simple_repeat Simple_repeat 2 50 0 596 181 60 23 chr20 30968332 30968365 -41185517 - MER65A LTR ERV1 -107 338 308 34 0 0 0 chr20 30968366 30968400 -41185482 + AT_rich Low_complexity Low_complexity 1 34 0 713 192 123 0 chr20 30968401 30968547 -41185335 - U1 snRNA snRNA -1 164 1 * 1596 152 22 105 chr20 30968537 30968898 -41184984 - MER65A LTR ERV1 -114 331 1 22 0 0 0 chr20 30968915 30968937 -41184945 + AT_rich Low_complexity Low_complexity 1 22 0 991 98 0 0 chr20 30969084 30969207 -41184675 + AluSq/x SINE Alu 3 125 -187 365 297 42 21 chr20 30970411 30970603 -41183279 + MER105 DNA DNA 9 204 0 323 248 83 16 chr20 30971014 30971135 -41182747 - L1M4 LINE L1 -3841 2305 2177 1099 117 13 0 chr20 30971168 30971322 -41182560 - AluSc SINE Alu -18 291 136 201 74 0 0 chr20 31021532 31021559 -41132323 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 195 323 65 24 chr20 31022060 31022184 -41131698 - MIR SINE MIR -43 219 91 2414 217 50 35 chr20 31024011 31024591 -41129291 - MLT1E LTR MaLR -4 589 1 181 296 0 0 chr20 31024739 31024783 -41129099 + MIR SINE MIR 217 260 -2 616 252 19 0 chr20 31025187 31025346 -41128536 + ERVL LTR ERVL 4851 5012 -752 303 241 13 0 chr20 31026601 31026680 -41127202 + LTR16C LTR ERVL 75 154 -337 399 240 50 0 chr20 31027202 31027323 -41126559 + LTR16C LTR ERVL 350 476 -15 312 323 17 82 chr20 31027868 31028100 -41125782 - MIR SINE MIR -37 225 9 415 280 23 0 chr20 31028186 31028318 -41125564 - Charlie4a DNA MER1_type -14 494 360 3604 100 13 13 chr20 31028321 31028843 -41125039 - L1PB3 LINE L1 -6 6148 5627 444 209 50 7 chr20 31028849 31028988 -41124894 + L1P LINE L1 5089 5233 -913 1962 107 71 0 chr20 31029000 31029281 -41124601 - AluSx SINE Alu -11 301 1 529 293 158 13 chr20 31029283 31029600 -41124282 - Charlie4a DNA MER1_type -145 363 1 233 247 155 31 chr20 31029856 31029953 -41123929 + MER5A DNA MER1_type 59 167 -22 * 286 258 67 22 chr20 31029894 31029983 -41123899 - MER5A DNA MER1_type -95 94 2 221 41 41 41 chr20 31030509 31030558 -41123324 + (GGA)n Simple_repeat Simple_repeat 1 49 0 218 317 79 0 chr20 31030669 31030770 -41123112 - MIR SINE MIR -120 142 34 427 160 0 0 chr20 31032382 31032457 -41121425 - MLT1J LTR MaLR -335 176 102 1548 183 48 3 chr20 31033666 31033999 -41119883 + MER68 LTR ERV1 43 390 -172 332 136 45 0 chr20 31034003 31034069 -41119813 + MER68 LTR ERV1 322 390 -172 345 121 45 0 chr20 31034073 31034139 -41119743 + MER68 LTR ERV1 322 390 -172 295 167 45 0 chr20 31034143 31034209 -41119673 + MER68 LTR ERV1 322 390 -172 303 167 45 0 chr20 31034213 31034279 -41119603 + MER68 LTR ERV1 322 390 -172 959 226 48 0 chr20 31034283 31034513 -41119369 + MER68 LTR ERV1 322 562 0 276 286 75 30 chr20 31035914 31036047 -41117835 + MIR3 SINE MIR 1 139 -69 365 319 6 0 chr20 31036228 31036385 -41117497 + MER103 DNA DNA 8 165 -1 2632 155 40 2 chr20 31037133 31037577 -41116305 - MER65C LTR ERV1 0 461 1 307 243 65 9 chr20 31037799 31037906 -41115976 + Charlie7 DNA MER1_type 45 157 -2455 843 226 28 0 chr20 31038093 31038270 -41115612 + MER5A DNA MER1_type 7 188 -1 1124 251 166 31 chr20 31038439 31038958 -41114924 + MLT1G LTR MaLR 1 589 -1 327 320 41 8 chr20 31039075 31039197 -41114685 - MIR3 SINE MIR -33 175 50 193 259 37 19 chr20 31039216 31039270 -41114612 + MIR SINE MIR 20 74 -188 404 275 219 1 chr20 31040182 31040352 -41113530 - MLT1J LTR MaLR -199 312 67 240 35 0 0 chr20 31044089 31044118 -41109764 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1970 112 0 14 chr20 31044119 31044404 -41109478 - AluSq SINE Alu -32 281 1 182 156 0 0 chr20 31045081 31045113 -41108769 + MIR SINE MIR 118 149 -113 293 299 11 0 chr20 31045309 31045396 -41108486 + MER94 DNA DNA 18 105 -29 368 300 23 0 chr20 31046262 31046392 -41107490 + LTR16A LTR ERVL 138 270 -180 352 217 24 0 chr20 31046432 31046515 -41107367 + LTR16A LTR ERVL 366 450 0 233 351 36 0 chr20 31046563 31046674 -41107208 + (CATG)n Simple_repeat Simple_repeat 4 118 0 2169 123 3 0 chr20 31047946 31048256 -41105626 - AluSx SINE Alu -1 311 1 2401 74 0 3 chr20 31048349 31048661 -41105221 - AluY SINE Alu 0 311 1 351 242 32 0 chr20 31048721 31048816 -41105066 - MLT1G1 LTR MaLR -11 584 487 206 404 22 7 chr20 31049434 31049570 -41104312 - L2 LINE L2 -2914 400 263 191 314 47 12 chr20 31049744 31049830 -41104052 - MIR SINE MIR -111 151 63 367 339 252 4 chr20 31050014 31050268 -41103614 + L1MC4 LINE L1 7402 7718 -324 604 193 83 5 chr20 31050271 31050312 -41103570 + L1PA16 LINE L1 5988 6024 -138 2127 126 0 0 chr20 31050312 31050613 -41103269 + AluSg SINE Alu 1 301 -9 604 193 83 5 chr20 31050613 31050731 -41103151 + L1PA16 LINE L1 6024 6157 -5 21 0 0 0 chr20 31050762 31050783 -41103099 + AT_rich Low_complexity Low_complexity 1 21 0 266 364 7 36 chr20 31050790 31050930 -41102952 + L1MC4 LINE L1 7764 7899 -143 257 222 0 16 chr20 31050926 31050989 -41102893 + L1MC4a LINE L1 7747 7808 0 * 236 229 46 46 chr20 31051613 31051766 -41102116 + (CCCTA)n Simple_repeat Simple_repeat 2 154 0 182 326 116 11 chr20 31053071 31053166 -41100716 - MER5A DNA MER1_type -22 167 63 801 216 0 3 chr20 31053247 31053575 -41100307 + (TG)n Simple_repeat Simple_repeat 1 326 0 214 227 67 27 chr20 31053609 31053684 -41100198 - MER5A DNA MER1_type -100 89 12 1525 287 30 6 chr20 31056830 31057331 -41096551 - LTR45 LTR ERV1 -12 513 1 344 343 30 0 chr20 31057722 31057856 -41096026 + MER5B DNA MER1_type 40 177 -1 331 341 169 19 chr20 31059153 31059473 -41094409 - L2 LINE L2 -36 3277 2910 455 174 94 36 chr20 31059801 31059939 -41093943 + MLT1G LTR MaLR 148 293 -297 489 181 78 0 chr20 31059992 31060108 -41093774 + MLT1G LTR MaLR 461 585 -5 1938 149 67 15 chr20 31060809 31061152 -41092730 + MER46B DNA MER2_type 1 236 0 192 40 0 0 chr20 31062443 31062468 -41091414 + (GA)n Simple_repeat Simple_repeat 2 26 0 1403 229 59 61 chr20 31062717 31063227 -41090655 + L1MB5 LINE L1 5666 6174 0 1109 269 91 27 chr20 31064560 31065044 -41088838 - MLT1E2 LTR MaLR -1 625 111 1288 164 51 101 chr20 31065062 31065442 -41088440 - MLT1A1 LTR MaLR -8 449 1 271 114 0 23 chr20 31065497 31065541 -41088341 - MLT1E2 LTR MaLR -611 43 1 442 286 42 24 chr20 31065677 31065845 -41088037 - MIR SINE MIR -33 229 59 618 119 0 50 chr20 31066413 31066514 -41087368 + AluSg/x SINE Alu 208 303 -7 228 266 14 21 chr20 31067099 31067242 -41086640 + (CATATA)n Simple_repeat Simple_repeat 5 146 0 226 270 16 0 chr20 31067361 31067424 -41086458 + (CA)n Simple_repeat Simple_repeat 1 64 0 635 178 16 47 chr20 31067652 31067805 -41086077 + FLAM_A SINE Alu 1 133 0 539 233 14 48 chr20 31068311 31068457 -41085425 - MIR SINE MIR -44 218 78 1131 260 130 9 chr20 31068919 31069342 -41084540 + MLT1E2 LTR MaLR 137 610 -16 280 312 51 58 chr20 31069534 31069672 -41084210 + MIR SINE MIR 53 189 -73 1832 198 97 11 chr20 31069763 31070227 -41083655 + MLT1D LTR MaLR 2 505 0 588 265 25 25 chr20 31070982 31071144 -41082738 - MIR SINE MIR -70 192 31 1588 176 28 72 chr20 31071178 31071424 -41082458 + MLT1A2 LTR MaLR 1 225 -149 4148 155 78 7 chr20 31071424 31072155 -41081727 + LTR39 LTR ERV1 1 783 0 1588 176 28 72 chr20 31072155 31072295 -41081587 + MLT1A2 LTR MaLR 225 370 -4 229 318 123 7 chr20 31073252 31073406 -41080476 + MIR SINE MIR 29 200 -62 490 190 103 48 chr20 31074633 31074796 -41079086 + MIR SINE MIR 40 232 -30 363 155 36 83 chr20 31075858 31075942 -41077940 - MER116 DNA Mariner 0 80 1 308 245 38 9 chr20 31076392 31076498 -41077384 + (CCCA)n Simple_repeat Simple_repeat 2 110 0 288 226 65 0 chr20 31076861 31076923 -41076959 + MLT1L LTR MaLR 217 282 -333 1962 132 165 8 chr20 31076938 31077308 -41076574 - MSTA LTR MaLR 0 428 1 218 304 114 91 chr20 31077720 31077940 -41075942 - L3b LINE CR1 -40 1543 1319 2502 184 26 2 chr20 31078074 31078530 -41075352 + LTR24 LTR ERV1 1 467 0 432 280 34 40 chr20 31078593 31078768 -41075114 - MER104 DNA Tc2 -1 179 6 207 331 155 7 chr20 31080157 31080299 -41073583 + MIR3 SINE MIR 10 172 -36 4718 138 3 1 chr20 31081174 31081905 -41071977 + L1PA16 LINE L1 5423 6154 -12 24 32 0 0 chr20 31081912 31081943 -41071939 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr20 31082227 31082252 -41071630 + AT_rich Low_complexity Low_complexity 1 25 0 2002 109 17 17 chr20 31082380 31082682 -41071200 + LTR8 LTR ERV1 390 691 0 499 227 172 0 chr20 31083206 31083369 -41070513 + MER21B LTR ERV1 613 803 -60 503 241 6 0 chr20 31083740 31083902 -41069980 + (TG)n Simple_repeat Simple_repeat 2 164 0 362 242 58 33 chr20 31084128 31084248 -41069634 + MER94 DNA DNA 1 123 -11 324 0 0 0 chr20 31084395 31084431 -41069451 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 25571 127 12 18 chr20 31084431 31084763 -41069119 - L1PA8 LINE L1 -17 6155 5822 1900 96 31 8 chr20 31084763 31085023 -41068859 - AluY SINE Alu -7 304 39 25571 127 12 18 chr20 31085023 31089002 -41064880 - L1PA8 LINE L1 -350 5822 1886 2176 88 0 0 chr20 31089002 31089265 -41064617 - AluY SINE Alu -16 295 33 25571 127 12 18 chr20 31089265 31090251 -41063631 - L1PA8 LINE L1 -4286 1886 895 412 226 10 10 chr20 31091049 31091165 -41062717 - MER97a DNA MER1_type? 0 894 803 1863 203 46 110 chr20 31091165 31091248 -41062634 + L1M4 LINE L1 4766 4853 -1331 2214 122 0 3 chr20 31091248 31091542 -41062340 - AluSp SINE Alu -19 294 2 1863 203 46 110 chr20 31091542 31092107 -41061775 + L1M4 LINE L1 4853 5453 -731 189 0 0 0 chr20 31092107 31092128 -41061754 + (CACCT)n Simple_repeat Simple_repeat 3 23 0 1863 203 46 110 chr20 31092128 31092162 -41061720 + L1M4 LINE L1 5453 5488 -696 1490 212 0 34 chr20 31092162 31092455 -41061427 + AluJo SINE Alu 1 283 -29 1863 203 46 110 chr20 31092455 31092668 -41061214 + L1M4 LINE L1 5488 5601 -583 2871 178 64 70 chr20 31092668 31093399 -41060483 - LTR8A LTR ERV1 0 727 1 1863 203 46 110 chr20 31093399 31093477 -41060405 + L1M4 LINE L1 5601 5682 -502 272 179 51 0 chr20 31093450 31093526 -41060356 + L1ME1 LINE L1 6096 6183 -1 * 409 171 62 23 chr20 31093529 31093658 -41060224 - MER97a DNA MER1_type? -84 810 677 1846 130 52 50 chr20 31093659 31094098 -41059784 + LTR56 LTR ERV1 2 437 0 582 216 26 31 chr20 31094098 31094286 -41059596 - MER97c DNA MER1_type? -414 676 490 2298 212 37 88 chr20 31094302 31095033 -41058849 + LTR8A LTR ERV1 34 727 0 623 276 64 58 chr20 31095034 31095346 -41058536 - MER97a DNA MER1_type? -402 492 179 * 2972 154 58 23 chr20 31095290 31095861 -41058021 - LTR59 LTR ERV1 -6 591 1 925 187 79 10 chr20 31095868 31096071 -41057811 - MER97c DNA MER1_type? -835 255 39 454 284 43 25 chr20 31096490 31096652 -41057230 + MIR3 SINE MIR 16 180 -28 2582 172 71 69 chr20 31096856 31097549 -41056333 + LTR8A LTR ERV1 34 727 0 4706 83 84 9 chr20 31098711 31099351 -41054531 - LTR12 LTR ERV1 0 688 1 330 351 163 25 chr20 31099713 31099958 -41053924 + L3 LINE CR1 702 980 -597 414 304 92 20 chr20 31100393 31100643 -41053239 + L2 LINE L2 2589 2856 -458 232 307 109 0 chr20 31100861 31100962 -41052920 + L2 LINE L2 3117 3228 -44 576 77 0 0 chr20 31101116 31101194 -41052688 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 302 290 28 37 chr20 31102335 31102442 -41051440 - MIR SINE MIR -103 159 54 381 317 111 10 chr20 31102675 31102883 -41050999 + L1MEd LINE L1 444 672 -5447 222 184 26 0 chr20 31102898 31102936 -41050946 - MER5A DNA MER1_type -136 53 15 357 226 0 54 chr20 31103277 31103370 -41050512 + L1MEd LINE L1 2214 2301 -3828 331 246 112 0 chr20 31103679 31103813 -41050069 + L1MEd LINE L1 2732 2880 -3249 1156 141 78 36 chr20 31103908 31104222 -41049660 + THE1C LTR MaLR 1 375 0 6124 124 17 53 chr20 31104224 31105300 -41048582 + THE1C-int LTR MaLR 3 1039 -541 919 158 16 49 chr20 31105300 31105483 -41048399 + THE1B LTR MaLR 153 329 -35 774 199 104 56 chr20 31105483 31105770 -41048112 - MLT1A2 LTR MaLR -73 301 1 937 230 31 27 chr20 31106300 31106561 -41047321 - MLT1F1 LTR MaLR -1 566 305 1365 227 81 17 chr20 31106590 31107000 -41046882 + L1MEc LINE L1 419 854 -5542 2188 128 0 7 chr20 31107204 31107508 -41046374 + AluSx SINE Alu 1 302 -10 283 272 182 30 chr20 31108702 31109037 -41044845 - MLT1H LTR MaLR -28 521 136 1965 187 15 0 chr20 31109814 31110157 -41043725 + MER7A DNA MER2_type 1 346 0 2679 214 100 13 chr20 31110164 31110836 -41043046 - L1MB7 LINE L1 0 6184 5455 385 214 177 38 chr20 31111069 31111357 -41042525 + MLT1G LTR MaLR 109 528 -62 361 208 274 14 chr20 31115887 31116033 -41037849 - MIR SINE MIR -69 193 13 669 241 36 20 chr20 31116078 31116273 -41037609 - L1ME1 LINE L1 -18 6148 5951 2002 161 0 10 chr20 31116289 31116600 -41037282 - AluJb SINE Alu 0 312 5 1817 222 20 4 chr20 31116895 31117346 -41036536 + L1MB4 LINE L1 4929 5386 -760 797 183 0 8 chr20 31117347 31117473 -41036409 + AluSq/x SINE Alu 2 126 -187 4511 161 8 5 chr20 31117488 31118283 -41035599 + L1MB4 LINE L1 5374 6170 -10 402 136 62 0 chr20 31118298 31118379 -41035503 + L1MB8 LINE L1 6093 6178 0 198 0 0 0 chr20 31118546 31118568 -41035314 + (A)n Simple_repeat Simple_repeat 1 22 0 1687 51 5 5 chr20 31118602 31118818 -41035064 - L1PA4 LINE L1 -5 6150 5935 2075 25 0 0 chr20 31118818 31119063 -41034819 + L1P2 LINE L1 5474 5718 -437 322 330 90 21 chr20 31120100 31120333 -41033549 + MLT1L LTR MaLR 59 307 -242 427 269 35 45 chr20 31121315 31121516 -41032366 + MLT1L LTR MaLR 130 328 -287 549 250 51 11 chr20 31121620 31121796 -41032086 + MLT1L LTR MaLR 357 539 -76 921 241 70 3 chr20 31121867 31122153 -41031729 + L1M4 LINE L1 3627 3931 -2215 370 250 28 9 chr20 31122194 31122302 -41031580 + L1ME3A LINE L1 6056 6165 -5 310 311 26 46 chr20 31122328 31122479 -41031403 + L1ME LINE L1 3463 3610 -2536 391 222 130 32 chr20 31122654 31122870 -41031012 + L1ME LINE L1 3731 3967 -2179 11535 185 38 57 chr20 31122870 31125289 -41028593 + L1MB3 LINE L1 24 2345 -4037 800 225 184 44 chr20 31125289 31125609 -41028273 - MLT1A1 LTR MaLR 0 365 1 11535 185 38 57 chr20 31125609 31127163 -41026719 + L1MB3 LINE L1 2345 3926 -2456 4475 201 30 49 chr20 31127162 31129391 -41024491 + L1MB3 LINE L1 4171 6357 -62 * 2190 129 0 0 chr20 31129391 31129694 -41024188 + AluSx SINE Alu 1 303 -9 4475 201 30 49 chr20 31129694 31129755 -41024127 + L1MB3 LINE L1 6357 6418 -1 831 271 97 81 chr20 31129770 31131375 -41022507 + L1ME LINE L1 3947 5565 -597 304 284 88 0 chr20 31131645 31131747 -41022135 + L1MC4 LINE L1 7927 8037 -5 248 291 111 0 chr20 31133675 31133792 -41020090 + L1ME LINE L1 6 135 -5935 504 259 48 0 chr20 31134079 31134226 -41019656 + MER5A DNA MER1_type 33 186 -3 497 259 57 69 chr20 31134957 31135219 -41018663 + MIR SINE MIR 3 261 -1 1847 198 27 0 chr20 31135292 31135666 -41018216 + MER65C LTR ERV1 1 384 -77 1964 125 142 5 chr20 31135676 31136043 -41017839 - MSTA LTR MaLR -11 417 1 315 185 25 12 chr20 31136043 31136124 -41017758 + MER65C LTR ERV1 380 461 0 222 173 136 74 chr20 31136332 31136413 -41017469 + L3 LINE CR1 1081 1166 -411 358 273 25 83 chr20 31136893 31137135 -41016747 + L1MC5 LINE L1 7690 7917 -44 1663 212 94 16 chr20 31137229 31137653 -41016229 + LTR32 LTR ERVL 15 471 0 3696 198 61 11 chr20 31137659 31138441 -41015441 - MER21B LTR ERV1 -40 823 3 361 268 45 71 chr20 31138652 31138850 -41015032 + LTR56 LTR ERV1 22 214 -231 1820 179 70 31 chr20 31138872 31139431 -41014451 - LTR27 LTR ERV1 0 636 3 685 138 9 0 chr20 31139433 31139542 -41014340 - LTR27-int LTR ERV1 -1 7090 6981 * 855 104 15 0 chr20 31139539 31139674 -41014208 - MER61-int LTR ERV1 -2077 3140 3004 1523 127 37 4 chr20 31139676 31139920 -41013962 - LTR28 LTR ERV1 -768 252 1 422 280 55 10 chr20 31139920 31140146 -41013736 + LTR56 LTR ERV1 232 437 0 400 176 59 0 chr20 31140549 31140634 -41013248 + LTR39 LTR ERV1 1 90 -693 40732 41 24 1 chr20 31140891 31146904 -41006978 + L1PA2 LINE L1 4 6155 0 2815 237 55 8 chr20 31146970 31147924 -41005958 + L1ME2 LINE L1 5155 6155 -9 5948 87 5 4 chr20 31147983 31148807 -41005075 + L1PA11 LINE L1 5346 6170 -4 22 0 0 0 chr20 31148837 31148859 -41005023 + AT_rich Low_complexity Low_complexity 1 22 0 1010 247 45 77 chr20 31148873 31149250 -41004632 + MSTD LTR MaLR 32 396 0 222 269 176 8 chr20 31151130 31151249 -41002633 + MER5A DNA MER1_type 1 139 -50 217 211 39 19 chr20 31152116 31152168 -41001714 + MER5A DNA MER1_type 49 101 -88 4044 149 115 10 chr20 31152169 31152968 -41000914 + MER4D LTR ERV1 4 886 -17 531 233 192 11 chr20 31153406 31153672 -41000210 - MER89 LTR ERV1 -70 489 176 5409 59 1 1 chr20 31154125 31154785 -40999097 + PABL_A LTR ERV1 1 660 0 301 323 8 31 chr20 31154934 31155061 -40998821 + MLT1E2 LTR MaLR 113 236 -390 223 291 0 18 chr20 31155119 31155229 -40998653 + C-rich Low_complexity Low_complexity 4 111 0 181 311 96 36 chr20 31155594 31155761 -40998121 + L2 LINE L2 2866 3042 -271 658 161 36 7 chr20 31156623 31156760 -40997122 - MER53 DNA DNA -7 182 42 263 304 149 5 chr20 31157127 31157328 -40996554 - MLT1K LTR MaLR -36 552 323 881 234 159 18 chr20 31157915 31158432 -40995450 + MLT1G1 LTR MaLR 17 589 -1 239 243 153 72 chr20 31159292 31159403 -40994479 + MIR SINE MIR 28 147 -115 436 163 54 11 chr20 31159421 31159513 -40994369 + L1MA8 LINE L1 6055 6150 -141 1624 204 41 60 chr20 31159597 31160014 -40993868 + LTR2 LTR ERV1 41 449 0 14843 79 3 5 chr20 31160014 31162007 -40991875 + HERVE LTR ERV1 1 1989 -5824 39939 40 1 10 chr20 31162009 31168195 -40985687 + L1PA4 LINE L1 26 6155 0 35318 66 28 7 chr20 31168230 31172865 -40981017 + HERVE LTR ERV1 1975 6705 -1108 1162 80 0 0 chr20 31172867 31173018 -40980864 + HERVE LTR ERV1 6930 7080 -733 1360 227 48 3 chr20 31173018 31173313 -40980569 + LTR2 LTR ERV1 142 449 0 516 186 16 39 chr20 31173325 31173454 -40980428 + L1MA8 LINE L1 6164 6289 -2 261 292 167 7 chr20 31174237 31174381 -40979501 + MIR SINE MIR 93 259 -3 280 207 24 49 chr20 31175184 31175266 -40978616 - MER103 DNA DNA -65 101 22 796 233 122 21 chr20 31175782 31176117 -40977765 - L1MC4 LINE L1 -967 7075 6707 1144 231 150 66 chr20 31176144 31176690 -40977192 + MLT1E LTR MaLR 1 592 -1 650 207 53 18 chr20 31177457 31177626 -40976256 - MER5A DNA MER1_type -6 183 9 195 162 0 0 chr20 31177643 31177680 -40976202 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 411 297 6 22 chr20 31177755 31177937 -40975945 + (CA)n Simple_repeat Simple_repeat 2 180 0 21784 179 44 15 chr20 31178020 31182144 -40971738 - ERVL-B1 LTR ERVL -1501 4263 20 1814 176 71 77 chr20 31182164 31182687 -40971195 - MLT2B1 LTR ERVL 0 520 1 185 237 0 13 chr20 31182781 31182857 -40971025 + (CA)n Simple_repeat Simple_repeat 2 76 0 218 346 20 0 chr20 31183841 31183942 -40969940 - MIR SINE MIR -132 130 28 298 65 0 0 chr20 31184322 31184368 -40969514 - L1PA7 LINE L1 -4854 1607 1562 27514 85 11 1 chr20 31184375 31189194 -40964688 + L1PA7 LINE L1 1609 6469 0 272 157 20 0 chr20 31190388 31190439 -40963443 - MIR SINE MIR -134 128 77 206 222 48 16 chr20 31190529 31190592 -40963290 - MIR SINE MIR -59 149 85 551 208 0 0 chr20 31192527 31192628 -40961254 - MIR SINE MIR -115 147 47 1045 206 100 5 chr20 31193458 31193744 -40960138 - LTR26B LTR ERV1 -19 512 235 489 191 21 0 chr20 31193739 31193833 -40960049 - LTR26E LTR ERV1 -526 96 1 * 429 185 115 55 chr20 31194947 31195147 -40958735 + HAL1b LINE L1 910 1121 -227 303 267 162 0 chr20 31195147 31195252 -40958630 + L1ME4a LINE L1 5997 6118 -3 180 0 0 0 chr20 31195323 31195343 -40958539 + (CAA)n Simple_repeat Simple_repeat 2 21 0 210 267 33 0 chr20 31195604 31195664 -40958218 + MER5A DNA MER1_type 30 91 -98 2551 48 0 0 chr20 31195732 31196024 -40957858 - AluY SINE Alu -9 302 11 355 284 6 33 chr20 31197271 31197454 -40956428 + G-rich Low_complexity Low_complexity 1 178 0 185 93 0 74 chr20 31199633 31199687 -40954195 + (TA)n Simple_repeat Simple_repeat 1 50 0 276 299 94 0 chr20 31199689 31199816 -40954066 + L1MC4 LINE L1 7904 8042 0 180 210 65 65 chr20 31201029 31201091 -40952791 + MIR SINE MIR 85 146 -62 201 237 244 46 chr20 31205028 31205159 -40948723 + L3 LINE CR1 1321 1477 -100 1361 221 148 49 chr20 31206089 31206624 -40947258 + L1MC4 LINE L1 6469 7056 -986 1159 302 89 17 chr20 31206647 31207232 -40946650 + L1MC4 LINE L1 7196 7903 -139 2319 109 0 3 chr20 31207297 31207600 -40946282 + AluSx SINE Alu 1 302 -10 318 178 25 127 chr20 31207768 31207886 -40945996 - L2 LINE L2 -28 3285 3180 355 273 79 14 chr20 31207911 31208050 -40945832 - MIR SINE MIR -48 214 67 426 287 88 6 chr20 31211051 31211232 -40942650 - MIR SINE MIR -45 217 22 214 282 10 39 chr20 31211332 31211435 -40942447 + GA-rich Low_complexity Low_complexity 5 104 0 285 318 174 20 chr20 31213198 31213399 -40940483 + L1ME4a LINE L1 5878 6109 -12 645 154 0 27 chr20 31214456 31214566 -40939316 + U6 snRNA snRNA 1 107 0 1600 190 20 2 chr20 31214567 31215193 -40938689 + L1MC1 LINE L1 2194 2831 -3595 * 6039 179 26 39 chr20 31215187 31217692 -40936190 + L1MC1 LINE L1 4146 6613 0 193 332 124 9 chr20 31219561 31219787 -40934095 + L2 LINE L2 1372 1623 -1691 589 281 202 25 chr20 31219808 31220490 -40933392 + L2 LINE L2 2482 3308 -5 330 339 138 34 chr20 31221384 31221682 -40932200 + L3 LINE CR1 267 595 -982 764 203 51 6 chr20 31225689 31225891 -40927991 + MLT1D LTR MaLR 325 503 -2 1477 231 76 18 chr20 31225919 31226377 -40927505 + MLT1D-int LTR MaLR 11 495 -876 181 276 95 19 chr20 31227002 31227107 -40926775 - MIR SINE MIR -59 149 37 706 229 73 0 chr20 31227224 31227403 -40926479 - L1MB5 LINE L1 -225 5949 5758 1591 201 0 29 chr20 31227406 31227714 -40926168 - AluJo SINE Alu -13 299 1 971 156 5 47 chr20 31227739 31227931 -40925951 + L1MB5 LINE L1 5991 6174 0 584 204 8 0 chr20 31227941 31228073 -40925809 + L1MB7 LINE L1 6043 6175 -9 420 163 267 0 chr20 31229135 31229221 -40924661 + MER3 DNA MER1_type 3 111 -98 240 303 207 11 chr20 31229256 31229444 -40924438 - L3 LINE CR1 -554 1023 799 478 167 135 0 chr20 31231619 31231715 -40922167 - MER81 DNA DNA 0 114 6 254 265 54 75 chr20 31233773 31233920 -40919962 - L2 LINE L2 -42 3271 3128 214 365 133 8 chr20 31234317 31234566 -40919316 + L2 LINE L2 2804 3083 -189 924 167 76 48 chr20 31235186 31235396 -40918486 - MER20 DNA MER1_type -3 216 1 229 139 0 0 chr20 31236039 31236082 -40917800 + L1MA3 LINE L1 6263 6305 0 210 274 105 48 chr20 31236104 31236228 -40917654 - L2 LINE L2 -2808 506 376 391 157 0 14 chr20 31237611 31237681 -40916201 + Tigger2 DNA MER2_type 1 69 -2649 2620 113 15 5 chr20 31237688 31238096 -40915786 + Tigger2 DNA MER2_type 2307 2718 0 249 274 32 0 chr20 31239134 31239196 -40914686 - L2 LINE L2 -5 3308 3245 566 197 137 0 chr20 31239718 31239835 -40914047 - MER5B DNA MER1_type 0 178 46 331 301 110 1 chr20 31240123 31240276 -40913606 + L1ME3 LINE L1 5980 6145 -17 190 227 0 23 chr20 31240486 31240530 -40913352 + MER5A DNA MER1_type 45 87 -102 682 170 37 7 chr20 31240766 31240901 -40912981 + MER20 DNA MER1_type 1 139 -80 1848 147 13 37 chr20 31241098 31241398 -40912484 - AluJb SINE Alu -19 293 1 7224 52 0 1 chr20 31241487 31242932 -40910950 - L1PA5 LINE L1 -1 6153 4703 318 283 22 25 chr20 31243037 31243195 -40910687 + LTR16C LTR ERVL 304 491 0 1200 282 63 69 chr20 31243197 31244321 -40909561 + L1MEd LINE L1 1083 2212 -3917 796 189 0 0 chr20 31244321 31244453 -40909429 + FLAM_A SINE Alu 2 133 0 1200 282 63 69 chr20 31244453 31245084 -40908798 + L1MEd LINE L1 2212 2850 -3279 2359 104 0 0 chr20 31245084 31245381 -40908501 + AluSx SINE Alu 1 297 -15 1200 282 63 69 chr20 31245381 31245440 -40908442 + L1MEd LINE L1 2850 2908 -3221 497 176 89 3 chr20 31245903 31246039 -40907843 - MLT1A2 LTR MaLR 0 390 224 281 234 128 11 chr20 31246252 31246346 -40907536 + MER3 DNA MER1_type 83 187 -22 263 241 101 25 chr20 31249922 31250001 -40903881 + MIR SINE MIR 60 144 -64 503 257 81 0 chr20 31250580 31250716 -40903166 + L2 LINE L2 3167 3313 0 351 274 49 0 chr20 31250762 31250864 -40903018 + L2 LINE L2 2951 3057 -215 325 292 25 8 chr20 31251288 31251408 -40902474 + L1ME3 LINE L1 5375 5496 -666 240 316 101 34 chr20 31255094 31255303 -40898579 - MIR SINE MIR -19 243 21 2180 94 50 3 chr20 31255585 31255882 -40898000 - AluSx SINE Alu -1 311 1 370 336 124 13 chr20 31256157 31256607 -40897275 + L1ME3 LINE L1 5552 6051 -111 1074 133 6 61 chr20 31257264 31257444 -40896438 - AluJb SINE Alu -7 305 136 1394 193 149 17 chr20 31258351 31258699 -40895183 + MSTD LTR MaLR 1 394 -2 484 253 80 35 chr20 31258811 31258997 -40894885 + MIR SINE MIR 15 203 -59 699 129 10 0 chr20 31259825 31259926 -40893956 - FRAM SINE Alu -32 144 43 231 242 16 0 chr20 31262176 31262238 -40891644 + L1MC5 LINE L1 7316 7378 -583 2011 138 0 14 chr20 31262360 31262643 -40891239 + AluSx SINE Alu 1 279 -33 318 26 0 0 chr20 31262646 31262685 -40891197 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 299 330 19 0 chr20 31264850 31264953 -40888929 + LTR16C LTR ERVL 191 295 -196 1878 224 93 22 chr20 31265731 31266298 -40887584 - MLT1E2 LTR MaLR 0 626 1 828 280 102 58 chr20 31266528 31267002 -40886880 + MLT1G LTR MaLR 16 549 0 652 220 8 0 chr20 31267314 31267446 -40886436 + MIR SINE MIR 2 134 -128 7256 192 49 16 chr20 31267458 31268965 -40884917 + L1MB4 LINE L1 3515 5302 -878 1942 103 0 11 chr20 31268965 31269237 -40884645 + AluSc SINE Alu 41 309 0 7256 192 49 16 chr20 31269237 31270117 -40883765 + L1MB4 LINE L1 5302 6151 -29 287 206 10 98 chr20 31270123 31270225 -40883657 + MIR SINE MIR 142 234 -28 191 250 0 0 chr20 31270196 31270232 -40883650 + L2 LINE L2 3251 3286 -27 * 3182 160 45 2 chr20 31271510 31272042 -40881840 + MER41D LTR ERV1 3 557 0 339 250 12 0 chr20 31272522 31272606 -40881276 + MLT1K LTR MaLR 169 253 -335 447 310 159 45 chr20 31274381 31274860 -40879022 - L3 LINE CR1 -7 1570 1147 2257 81 3 10 chr20 31274860 31275156 -40878726 - AluSp SINE Alu -19 294 1 447 310 159 45 chr20 31275156 31275167 -40878715 - L3 LINE CR1 -430 1147 1139 2257 89 0 10 chr20 31275167 31275480 -40878402 - AluY SINE Alu -1 310 1 447 310 159 45 chr20 31275480 31275696 -40878186 - L3 LINE CR1 -438 1139 949 2115 109 7 0 chr20 31275696 31275989 -40877893 - AluSx SINE Alu -17 295 1 447 310 159 45 chr20 31275989 31276115 -40877767 - L3 LINE CR1 -628 949 641 1993 142 10 3 chr20 31276958 31277268 -40876614 + AluSx SINE Alu 1 312 0 403 99 14 14 chr20 31277271 31277342 -40876540 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 287 303 139 0 chr20 31277419 31277541 -40876341 + L2 LINE L2 3172 3310 -3 252 282 28 0 chr20 31278621 31278692 -40875190 + MIR SINE MIR 117 189 -73 614 284 34 38 chr20 31279348 31279587 -40874295 - MIR SINE MIR -10 252 15 411 267 139 22 chr20 31280842 31281022 -40872860 + MER63A DNA MER1_type 1 201 -9 2513 50 0 0 chr20 31281264 31281561 -40872321 + AluY SINE Alu 3 299 -12 321 242 91 0 chr20 31283230 31283329 -40870553 - MIR SINE MIR -65 143 36 280 250 265 1 chr20 31284080 31284213 -40869669 - MIR3 SINE MIR -19 189 19 1441 162 64 17 chr20 31284631 31284928 -40868954 + AluJb SINE Alu 1 311 -1 232 262 47 56 chr20 31285471 31285578 -40868304 - MIR SINE MIR -61 147 42 2014 123 0 46 chr20 31286202 31286526 -40867356 - AluSx SINE Alu -3 309 1 196 248 21 90 chr20 31287542 31287687 -40866195 + L2 LINE L2 2921 3055 -217 245 204 0 0 chr20 31287728 31287772 -40866110 + MLT1I LTR MaLR 359 402 -7 256 276 313 0 chr20 31288704 31288838 -40865044 - MER5B DNA MER1_type 0 178 3 413 221 98 8 chr20 31289992 31290114 -40863768 - MIR SINE MIR -104 158 26 345 149 45 15 chr20 31290486 31290553 -40863329 + Charlie8 DNA MER1_type 86 154 -2263 233 204 37 0 chr20 31290680 31290734 -40863148 + MER5A DNA MER1_type 47 102 -87 404 212 233 0 chr20 31291757 31291903 -40861979 - MER5A DNA MER1_type 0 189 10 248 242 0 11 chr20 31292427 31292518 -40861364 + GA-rich Low_complexity Low_complexity 3 92 0 1917 135 3 7 chr20 31293346 31293650 -40860232 - AluJo SINE Alu -9 303 1 438 232 195 12 chr20 31294842 31295006 -40858876 + MLT1G LTR MaLR 202 395 -195 1151 170 62 1 chr20 31295029 31295454 -40858428 + LTR54 LTR ERV1 1 510 0 609 244 8 0 chr20 31295454 31295581 -40858301 + MLT1G LTR MaLR 463 590 0 910 220 21 5 chr20 31295820 31296006 -40857876 - MER5A DNA MER1_type 0 189 1 25 31 0 0 chr20 31297808 31297840 -40856042 + GC_rich Low_complexity Low_complexity 1 32 0 328 250 0 0 chr20 31299212 31299284 -40854598 + MIR SINE MIR 79 150 -112 832 178 33 33 chr20 31299768 31299948 -40853934 - FRAM SINE Alu -2 174 1 258 294 24 0 chr20 31300010 31300095 -40853787 - MIR SINE MIR -73 135 49 569 285 224 11 chr20 31300325 31300700 -40853182 + MLT1G1 LTR MaLR 141 595 0 1081 283 191 14 chr20 31300733 31301373 -40852509 + L2 LINE L2 2055 2807 -507 430 207 201 6 chr20 31301379 31301529 -40852353 + MER5A DNA MER1_type 6 189 0 * 556 270 113 35 chr20 31301529 31301894 -40851988 + L2 LINE L2 2827 3220 -93 216 301 97 0 chr20 31302551 31302654 -40851228 - MIR SINE MIR -87 175 63 406 231 69 103 chr20 31304661 31304864 -40849018 + MIR3 SINE MIR 13 208 0 606 12 36 0 chr20 31306524 31306607 -40847275 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 351 272 129 45 chr20 31307093 31307328 -40846554 + L1MCa LINE L1 2234 2488 -3940 492 96 44 22 chr20 31307375 31307511 -40846371 + (CA)n Simple_repeat Simple_repeat 2 140 0 662 120 44 25 chr20 31307523 31308183 -40845699 + (CA)n Simple_repeat Simple_repeat 1 672 0 486 167 49 6 chr20 31308195 31308357 -40845525 + (CA)n Simple_repeat Simple_repeat 2 170 0 407 301 50 10 chr20 31308371 31308650 -40845232 + L1M2 LINE L1 1265 1787 -4429 369 283 33 0 chr20 31308626 31308746 -40845136 + L1MEc LINE L1 1547 1670 -4726 * 23 33 0 0 chr20 31309216 31309246 -40844636 + AT_rich Low_complexity Low_complexity 1 30 0 348 274 169 20 chr20 31309246 31309600 -40844282 + L1MEc LINE L1 2200 2606 -3609 2625 149 10 0 chr20 31310199 31310596 -40843286 - MER57A LTR ERV1 0 403 3 1527 131 54 0 chr20 31310926 31311186 -40842696 + L1MA8 LINE L1 6012 6285 -6 856 177 20 0 chr20 31311611 31311758 -40842124 + FRAM SINE Alu 1 148 -28 245 142 164 0 chr20 31312406 31312480 -40841402 + MLT1H1 LTR MaLR 437 527 -28 370 252 48 83 chr20 31312503 31312671 -40841211 - L1M4 LINE L1 -1104 5042 4881 44 0 0 0 chr20 31313505 31313549 -40840333 + AT_rich Low_complexity Low_complexity 1 44 0 559 257 101 35 chr20 31313736 31313993 -40839889 + MLT1L LTR MaLR 14 287 -328 531 235 102 27 chr20 31314401 31314588 -40839294 - MIR SINE MIR 0 262 62 212 51 0 51 chr20 31316840 31316879 -40837003 + (TAAAAA)n Simple_repeat Simple_repeat 1 37 0 233 305 0 0 chr20 31318680 31318758 -40835124 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 820 244 28 52 chr20 31319919 31320169 -40833713 - MIR SINE MIR -6 256 13 328 311 128 18 chr20 31320254 31320418 -40833464 + MER5A DNA MER1_type 7 188 -1 620 225 165 32 chr20 31320634 31320919 -40832963 + MER33 DNA MER1_type 2 324 0 210 37 0 0 chr20 31322629 31322656 -40831226 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 2201 90 10 0 chr20 31325542 31325843 -40828039 + AluSp SINE Alu 3 306 -7 246 325 90 52 chr20 31325861 31326150 -40827732 + LTR16C LTR ERVL 24 323 -168 262 256 172 62 chr20 31326184 31326428 -40827454 + LTR16A1 LTR ERVL 6 271 -179 664 291 13 43 chr20 31326950 31327180 -40826702 - MIR SINE MIR -4 258 36 1756 176 12 95 chr20 31327263 31327695 -40826187 + MSTD LTR MaLR 1 396 0 216 97 0 0 chr20 31327816 31327847 -40826035 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 540 219 128 26 chr20 31328548 31328786 -40825096 - MLT1F1 LTR MaLR 0 555 282 242 246 31 0 chr20 31328813 31328878 -40825004 - MLT1F1 LTR MaLR -402 188 122 629 216 131 27 chr20 31328893 31329115 -40824767 + ORSL DNA AcHobo 4 248 -27 666 253 51 0 chr20 31329538 31329716 -40824166 + MER5A DNA MER1_type 1 187 -2 369 317 109 10 chr20 31329974 31330176 -40823706 - MIR SINE MIR -4 258 37 244 162 44 15 chr20 31330430 31330498 -40823384 + CT-rich Low_complexity Low_complexity 2 71 0 410 205 62 0 chr20 31331501 31331613 -40822269 + LTR16C LTR ERVL 372 490 -1 194 283 71 0 chr20 31331614 31331713 -40822169 + L2 LINE L2 3153 3258 -14 397 76 33 130 chr20 31332699 31332791 -40821091 - MER4B LTR ERV1 -527 83 1 4421 232 17 29 chr20 31332806 31333412 -40820470 + L1MC2 LINE L1 2453 3065 -3081 2156 123 3 0 chr20 31333412 31333722 -40820160 + AluSx SINE Alu 1 311 -1 4421 232 17 29 chr20 31333722 31334463 -40819419 + L1MC2 LINE L1 3065 3784 -2362 1079 184 18 58 chr20 31334464 31334741 -40819141 + AluJo SINE Alu 2 267 -45 2017 248 43 12 chr20 31334742 31334792 -40819090 + L1 LINE L1 2037 2084 -4062 2117 114 0 7 chr20 31334792 31335091 -40818791 + AluSx SINE Alu 1 297 -15 2017 248 43 12 chr20 31335091 31335811 -40818071 + L1 LINE L1 2084 4026 -2120 369 172 0 16 chr20 31335837 31335901 -40817981 - MSTA-int LTR MaLR -1588 63 1 1965 157 123 23 chr20 31335901 31336290 -40817592 - MSTA LTR MaLR 0 428 1 302 68 0 0 chr20 31336290 31336334 -40817548 + L1MA3 LINE L1 6262 6305 0 5046 207 33 16 chr20 31336344 31338416 -40815466 + L1MC2 LINE L1 4013 6117 -227 805 160 8 0 chr20 31338417 31338542 -40815340 + FLAM_C SINE Alu 1 126 -17 1096 118 56 6 chr20 31338554 31338732 -40815150 + L1MC2 LINE L1 6107 6293 -51 284 259 93 19 chr20 31338764 31338872 -40815010 - L1MEd LINE L1 -5908 211 96 2287 62 10 7 chr20 31339027 31339334 -40814548 + AluY SINE Alu 1 308 -3 942 163 59 68 chr20 31341062 31341283 -40812599 + MER20 DNA MER1_type 1 219 0 335 164 15 30 chr20 31341995 31342062 -40811820 - LTR67 LTR ERVL -8 549 484 2272 165 25 42 chr20 31342078 31342146 -40811736 - MSTB LTR MaLR -2 424 356 2005 104 0 17 chr20 31342146 31342487 -40811395 - AluSx SINE Alu 0 336 1 2272 165 25 42 chr20 31342487 31342848 -40811034 - MSTB LTR MaLR -70 356 1 2650 132 90 0 chr20 31343340 31343786 -40810096 + LTR19A LTR ERV1 1 486 0 232 261 14 14 chr20 31345310 31345379 -40808503 + MLT1G1 LTR MaLR 525 593 -2 388 245 161 7 chr20 31345389 31345532 -40808350 - Charlie2b DNA MER1_type -107 2675 2511 41708 69 2 3 chr20 31345532 31351323 -40802559 + L1PA5 LINE L1 4 5784 -370 7260 35 0 0 chr20 31351322 31352183 -40801699 - L1PA3 LINE L1 -1078 5068 4208 * 7873 18 6 0 chr20 31352183 31353263 -40800619 + L1PA3 LINE L1 5071 6155 0 2990 67 0 3 chr20 31353263 31353675 -40800207 + L1PA5 LINE L1 5770 6180 0 2400 237 95 55 chr20 31353886 31354086 -40799796 - Charlie2b DNA MER1_type -323 2539 2349 2015 124 3 0 chr20 31354086 31354384 -40799498 + AluSg SINE Alu 1 299 -11 2400 237 95 55 chr20 31354384 31354727 -40799155 - Charlie2b DNA MER1_type -513 2349 2021 1878 152 0 0 chr20 31354727 31355029 -40798853 - AluJb SINE Alu -10 302 1 2400 237 95 55 chr20 31355029 31355759 -40798123 - Charlie2b DNA MER1_type -841 2021 1155 1198 125 0 0 chr20 31355825 31356001 -40797881 - AluSg/x SINE Alu -5 305 130 420 264 0 23 chr20 31356047 31356176 -40797706 - Charlie2b DNA MER1_type -1762 1020 895 242 194 58 58 chr20 31356353 31356392 -40797490 + LTR16A1 LTR ERVL 22 60 -397 369 0 0 0 chr20 31356392 31356433 -40797449 + (CA)n Simple_repeat Simple_repeat 1 41 0 242 194 58 58 chr20 31356433 31356496 -40797386 + LTR16A1 LTR ERVL 59 124 -333 385 183 200 0 chr20 31356627 31356747 -40797135 + LTR16A1 LTR ERVL 314 457 0 323 159 16 0 chr20 31356797 31356860 -40797022 + L1ME1 LINE L1 6098 6161 -5 359 317 81 38 chr20 31357857 31358043 -40795839 + L1ME LINE L1 5631 5824 -297 282 316 123 42 chr20 31358048 31358472 -40795410 + HAL1 LINE L1 6 463 -2044 574 235 0 8 chr20 31358708 31359196 -40794686 + (CA)n Simple_repeat Simple_repeat 1 483 0 2584 236 100 71 chr20 31359214 31360625 -40793257 + HAL1 LINE L1 762 2213 -294 759 287 190 19 chr20 31360790 31361159 -40792723 - LTR16C LTR ERVL -11 480 49 542 231 153 100 chr20 31361684 31362142 -40791740 + L1MEd LINE L1 417 898 -5221 833 168 7 0 chr20 31362164 31362301 -40791581 - AluJo SINE Alu -174 138 1 531 302 82 15 chr20 31362338 31362666 -40791216 + L1MEd LINE L1 904 1253 -4866 512 246 80 11 chr20 31362677 31362864 -40791018 + HAL1 LINE L1 1424 1623 -884 4105 197 35 30 chr20 31362926 31363021 -40790861 + L1M3 LINE L1 4238 4331 -1849 1344 172 90 11 chr20 31363021 31363288 -40790594 + AluJb SINE Alu 4 291 -21 4105 197 35 30 chr20 31363288 31364544 -40789338 + L1M3 LINE L1 4331 5597 -583 22044 148 25 16 chr20 31364544 31364969 -40788913 + ERVL LTR ERVL 1926 2346 -3418 1684 167 10 10 chr20 31364969 31365268 -40788614 + AluJo SINE Alu 1 299 -13 22044 148 25 16 chr20 31365268 31368433 -40785449 + ERVL LTR ERVL 2346 5548 -216 1348 181 104 29 chr20 31368484 31368793 -40785089 - MLT1A1 LTR MaLR -33 332 1 760 152 171 25 chr20 31368815 31368973 -40784909 - MER21B LTR ERV1 -682 181 1 292 86 86 17 chr20 31368973 31369031 -40784851 + L1MB7 LINE L1 6117 6178 -6 485 309 40 24 chr20 31370080 31370298 -40783584 + MIR SINE MIR 4 223 -39 340 298 34 34 chr20 31371020 31371198 -40782684 + LTR16C LTR ERVL 244 421 -70 290 223 96 11 chr20 31371610 31371704 -40782178 - LTR16A1 LTR ERVL -9 448 347 1892 171 30 38 chr20 31371960 31372300 -40781582 - MLT1A1 LTR MaLR 0 365 27 1912 244 102 4 chr20 31372300 31372792 -40781090 - MER87 LTR ERV1 0 541 2 1892 171 30 38 chr20 31372792 31372819 -40781063 - MLT1A1 LTR MaLR -338 27 1 209 319 36 48 chr20 31373508 31373674 -40780208 + L2 LINE L2 2141 2304 -1010 294 310 70 0 chr20 31374101 31374230 -40779652 + L2 LINE L2 2957 3094 -178 416 321 101 6 chr20 31374324 31374492 -40779390 + MIR SINE MIR 68 251 -11 199 179 0 26 chr20 31375624 31375663 -40778219 + L3 LINE CR1 1528 1565 -12 184 121 30 0 chr20 31375634 31375667 -40778215 + MIR3 SINE MIR 163 196 -12 * 1726 234 116 4 chr20 31376458 31376575 -40777307 - MLT1F LTR MaLR -6 536 434 2098 160 23 28 chr20 31376575 31376969 -40776913 + MSTD LTR MaLR 1 392 -4 1726 234 116 4 chr20 31376969 31377333 -40776549 - MLT1F LTR MaLR -108 434 1 453 267 87 38 chr20 31377767 31378029 -40775853 - L1MC4a LINE L1 -297 5824 5656 276 330 28 23 chr20 31378038 31378214 -40775668 - L1M4 LINE L1 -3310 2836 2660 761 270 83 0 chr20 31378379 31378583 -40775299 - MIR SINE MIR -8 254 34 809 196 169 89 chr20 31378634 31378742 -40775140 - HsTC2 DNA Tc2 -44 1854 1756 1789 122 3 31 chr20 31378742 31379028 -40774854 - AluJb SINE Alu -22 290 13 809 196 169 89 chr20 31379028 31379322 -40774560 - HsTC2 DNA Tc2 -142 1756 1244 926 304 182 16 chr20 31381090 31381606 -40772276 - L1ME3A LINE L1 -9 6161 5560 197 136 0 23 chr20 31382043 31382087 -40771795 + (TC)n Simple_repeat Simple_repeat 2 44 0 337 252 19 39 chr20 31382124 31382227 -40771655 - MIR SINE MIR -82 180 80 356 201 149 15 chr20 31383923 31384057 -40769825 - L1ME4a LINE L1 -2 6119 5968 303 212 30 10 chr20 31384172 31384271 -40769611 + L1ME4a LINE L1 6002 6102 -19 275 265 0 0 chr20 31384291 31384359 -40769523 - L1ME4a LINE L1 -289 5832 5765 594 236 112 39 chr20 31384381 31384559 -40769323 + MER69 DNA AcHobo 62 252 -974 584 262 42 143 chr20 31385041 31385473 -40768409 + HAL1b LINE L1 75 462 -886 1471 182 52 12 chr20 31386084 31386414 -40767468 + L1MD3 LINE L1 7653 7995 0 470 295 110 17 chr20 31387376 31387722 -40766160 + LTR16C LTR ERVL 104 481 -10 402 223 74 27 chr20 31389317 31389481 -40764401 + MIR SINE MIR 1 171 -62 1642 162 7 7 chr20 31389729 31390019 -40763863 + AluJo SINE Alu 2 291 -21 2360 78 7 3 chr20 31391169 31391477 -40762405 + AluSx SINE Alu 1 309 -3 1510 157 86 7 chr20 31391620 31391900 -40761982 + AluSq SINE Alu 1 302 -11 2140 181 63 88 chr20 31392049 31392730 -40761152 - MER4A LTR ERV1 0 664 1 2379 87 0 0 chr20 31393150 31393459 -40760423 - AluY SINE Alu -2 309 1 1963 215 107 14 chr20 31393761 31394329 -40759553 + L1MC4 LINE L1 7199 7819 -223 6684 211 54 31 chr20 31394337 31394881 -40759001 - L1MB7 LINE L1 -9 6175 5645 1572 188 10 10 chr20 31394881 31395189 -40758693 - AluJo SINE Alu -4 308 1 6684 211 54 31 chr20 31395189 31395278 -40758604 - L1MB7 LINE L1 -539 5645 5560 2024 138 6 6 chr20 31395278 31395590 -40758292 - AluSx SINE Alu 0 312 1 6684 211 54 31 chr20 31395590 31396693 -40757189 - L1MB7 LINE L1 -624 5560 4485 2396 3 79 10 chr20 31396693 31396983 -40756899 - AluY SINE Alu -1 310 1 6684 211 54 31 chr20 31396983 31397003 -40756879 - L1MB7 LINE L1 -1699 4485 4467 1518 163 37 0 chr20 31397003 31397273 -40756609 - AluJo SINE Alu -30 282 3 6684 211 54 31 chr20 31397273 31397646 -40756236 - L1MB7 LINE L1 -1717 4467 4104 1841 48 4 0 chr20 31397646 31397875 -40756007 - L1PA4 LINE L1 0 6155 5926 6684 211 54 31 chr20 31397875 31398147 -40755735 - L1MB7 LINE L1 -2080 4104 3840 1376 190 68 60 chr20 31398147 31398532 -40755350 + MLT1B LTR MaLR 1 388 -2 6684 211 54 31 chr20 31398532 31398691 -40755191 - L1MB7 LINE L1 -2344 3840 3566 844 164 26 42 chr20 31399330 31399519 -40754363 - AluJo SINE Alu -126 186 1 218 176 11 66 chr20 31399973 31400064 -40753818 + (ATAAG)n Simple_repeat Simple_repeat 3 88 0 2585 177 10 73 chr20 31402488 31402657 -40751225 - L1MA10 LINE L1 0 6334 6156 396 0 0 0 chr20 31402657 31402701 -40751181 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1813 143 7 0 chr20 31402701 31402981 -40750901 - AluSx SINE Alu -30 282 1 2585 177 10 73 chr20 31402981 31403252 -40750630 - L1MA10 LINE L1 -177 6157 5939 1535 191 20 92 chr20 31403252 31403645 -40750237 + MLT1A1 LTR MaLR 1 365 0 2585 177 10 73 chr20 31403645 31403806 -40750076 - L1MA10 LINE L1 -395 5939 5769 3744 104 32 0 chr20 31403811 31404341 -40749541 - MER41B LTR ERV1 -88 547 1 1299 124 0 0 chr20 31404341 31404518 -40749364 - MER41B-int LTR ERV1 0 5946 5770 * 7512 99 12 20 chr20 31404516 31404901 -40748981 - MER41B-int LTR ERV1 -544 5402 5015 2052 127 0 0 chr20 31404901 31405192 -40748690 + AluSg SINE Alu 1 291 -19 7512 99 12 20 chr20 31405192 31405919 -40747963 - MER41B-int LTR ERV1 -931 5015 4299 32088 107 12 61 chr20 31405927 31410481 -40743401 + L1PA7 LINE L1 10 4147 -2007 2207 109 3 0 chr20 31410481 31410792 -40743090 + AluSp SINE Alu 2 313 0 32088 107 12 61 chr20 31410792 31412697 -40741185 + L1PA7 LINE L1 4147 6143 -11 3157 135 54 30 chr20 31412707 31413351 -40740531 - MER41B-int LTR ERV1 -1510 3505 2846 5032 114 31 6 chr20 31413351 31414147 -40739735 - MER57-int LTR ERV1 -3941 3596 2781 837 113 42 14 chr20 31414161 31414303 -40739579 - MER57-int LTR ERV1 -4174 2089 1944 * 3663 118 31 17 chr20 31414282 31414860 -40739022 - MER57-int LTR ERV1 -4171 1775 1190 614 62 0 0 chr20 31414855 31414935 -40738947 - MER57-int LTR ERV1 -5144 802 723 * 1503 244 83 5 chr20 31414956 31415365 -40738517 - L1M4b LINE L1 -6416 443 3 316 263 58 66 chr20 31415456 31415593 -40738289 - MIR SINE MIR -63 199 64 234 0 0 0 chr20 31415653 31415679 -40738203 + (TG)n Simple_repeat Simple_repeat 2 27 0 1842 155 23 23 chr20 31415795 31416104 -40737778 + AluJo SINE Alu 1 309 -3 247 258 16 0 chr20 31416316 31416378 -40737504 + MIR3 SINE MIR 143 205 -3 273 190 17 0 chr20 31416521 31416579 -40737303 + LTR16C LTR ERVL 195 253 -238 481 244 111 15 chr20 31417189 31417260 -40736622 + MIR SINE MIR 19 82 -180 1901 160 6 26 chr20 31417260 31417573 -40736309 - AluJb SINE Alu -5 307 1 481 244 111 15 chr20 31417573 31417636 -40736246 + MIR SINE MIR 82 166 -96 1591 217 78 80 chr20 31417647 31418145 -40735737 + L1MC4 LINE L1 7317 7813 -229 218 310 62 55 chr20 31418358 31418503 -40735379 - L2 LINE L2 -5 3267 3122 296 184 11 69 chr20 31418711 31418798 -40735084 + AluSp/q SINE Alu 222 303 0 31 0 0 0 chr20 31418800 31418831 -40735051 + AT_rich Low_complexity Low_complexity 1 31 0 260 197 49 16 chr20 31419028 31419089 -40734793 + MIR3 SINE MIR 143 205 -3 242 279 15 0 chr20 31419235 31419303 -40734579 + LTR16C LTR ERVL 185 253 -238 288 127 365 0 chr20 31419414 31419477 -40734405 - AluJ SINE Alu -49 253 168 626 167 19 0 chr20 31419478 31419586 -40734296 - AluJ SINE Alu -201 111 2 22 56 0 0 chr20 31419950 31419986 -40733896 + AT_rich Low_complexity Low_complexity 1 36 0 259 281 146 0 chr20 31420041 31420130 -40733752 - L2 LINE L2 -10 3303 3202 353 311 80 34 chr20 31420335 31420573 -40733309 + L1M4 LINE L1 2615 2863 -3283 729 123 0 0 chr20 31421018 31421132 -40732750 + L1MA4 LINE L1 6175 6288 -12 37044 84 8 8 chr20 31421133 31427270 -40726612 - L1PA6 LINE L1 -6 6148 11 331 304 18 12 chr20 31427283 31427451 -40726431 + L1M4 LINE L1 2869 3037 -3109 584 243 142 9 chr20 31427862 31428080 -40725802 + LTR65 LTR ERV1 278 524 -145 603 275 174 28 chr20 31429217 31429938 -40723944 + L1M4 LINE L1 3028 3895 -2251 2335 94 3 7 chr20 31429938 31430236 -40723646 + AluSx SINE Alu 1 297 -15 603 275 174 28 chr20 31430236 31430368 -40723514 + L1M4 LINE L1 3895 4006 -2140 704 221 115 1 chr20 31430881 31431158 -40722724 - LTR16C LTR ERVL 0 491 150 295 306 24 0 chr20 31431654 31431739 -40722143 - LTR16C LTR ERVL 0 491 405 180 0 0 0 chr20 31431740 31431760 -40722122 + (GA)n Simple_repeat Simple_repeat 1 20 0 2649 178 40 2 chr20 31431909 31432364 -40721518 - MER70A LTR ERVL 0 472 1 405 230 59 89 chr20 31432566 31432701 -40721181 - L2 LINE L2 -28 3285 3155 2214 189 35 115 chr20 31432764 31432984 -40720898 + LTR8 LTR ERV1 31 267 -424 2507 86 0 0 chr20 31432984 31433288 -40720594 + AluSq SINE Alu 1 304 -9 2214 189 35 115 chr20 31433288 31433607 -40720275 + LTR8 LTR ERV1 267 500 -191 1925 117 8 4 chr20 31433607 31433871 -40720011 + AluSx SINE Alu 27 291 -21 2214 189 35 115 chr20 31433871 31434049 -40719833 + LTR8 LTR ERV1 500 691 0 351 257 186 44 chr20 31434051 31434234 -40719648 - L2 LINE L2 -174 3139 2931 623 279 60 40 chr20 31434370 31434717 -40719165 + L1MC/D LINE L1 5401 5754 -2054 2046 120 34 0 chr20 31435207 31435498 -40718384 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr20 31436045 31436074 -40717808 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr20 31436157 31436192 -40717690 + GC_rich Low_complexity Low_complexity 1 35 0 2186 113 3 23 chr20 31438479 31438779 -40715103 + AluSx SINE Alu 1 294 -18 213 335 65 20 chr20 31439154 31439354 -40714528 + L2 LINE L2 2305 2513 -801 3385 197 64 14 chr20 31439772 31440785 -40713097 - L1MB3 LINE L1 -7 6412 5314 5354 216 100 31 chr20 31440786 31441971 -40711911 - L1MB3 LINE L1 -2702 3680 2579 2142 136 111 40 chr20 31441971 31442043 -40711839 - Tigger2a DNA MER2_type -2274 434 369 1490 139 0 9 chr20 31442043 31442266 -40711616 - AluJo SINE Alu -54 258 38 2142 136 111 40 chr20 31442266 31442598 -40711284 - Tigger2a DNA MER2_type -2339 369 1 5354 216 100 31 chr20 31442598 31444194 -40709688 - L1MB3 LINE L1 -3803 2579 777 338 313 39 16 chr20 31444213 31444341 -40709541 - L1MB3 LINE L1 -5719 665 535 21 0 0 0 chr20 31444754 31444775 -40709107 + AT_rich Low_complexity Low_complexity 1 21 0 335 321 130 13 chr20 31445413 31445805 -40708077 - L2 LINE L2 -60 3253 2816 322 319 104 14 chr20 31447084 31447228 -40706654 + MIR SINE MIR 35 191 -71 301 274 148 7 chr20 31447750 31447885 -40705997 - MER5A DNA MER1_type -22 167 14 1006 119 0 0 chr20 31448604 31448738 -40705144 + AluSp/q SINE Alu 156 289 -24 24 0 0 0 chr20 31448756 31448780 -40705102 + AT_rich Low_complexity Low_complexity 1 24 0 1375 121 5 0 chr20 31449190 31449381 -40704501 - AluSg/x SINE Alu 0 312 118 2508 70 0 10 chr20 31449381 31449695 -40704187 - AluY SINE Alu 0 311 1 830 155 8 0 chr20 31449723 31449852 -40704030 + FLAM_A SINE Alu 1 130 -3 60 15 0 0 chr20 31449852 31449919 -40703963 + AT_rich Low_complexity Low_complexity 1 67 0 1673 174 52 14 chr20 31450649 31450936 -40702946 + AluJb SINE Alu 1 298 -14 2206 108 0 14 chr20 31450945 31451240 -40702642 + AluSx SINE Alu 1 291 -21 252 226 60 68 chr20 31451909 31452042 -40701840 - L1MC/D LINE L1 -1976 5832 5701 1490 212 15 4 chr20 31452100 31452374 -40701508 - AluJb SINE Alu -18 294 18 1609 174 7 30 chr20 31452858 31452982 -40700900 + AluJo SINE Alu 1 126 -186 2466 88 0 0 chr20 31452982 31453290 -40700592 - AluY SINE Alu -3 308 1 1609 174 7 30 chr20 31453290 31453469 -40700413 + AluJo SINE Alu 126 297 -15 1966 168 0 0 chr20 31453953 31454251 -40699631 + AluJo SINE Alu 1 298 -14 732 74 11 0 chr20 31454984 31455079 -40698803 + HY3 scRNA scRNA 2 97 -4 236 148 0 56 chr20 31457994 31458048 -40695834 + (TCC)n Simple_repeat Simple_repeat 3 53 0 215 135 0 77 chr20 31458083 31458135 -40695747 + (TCC)n Simple_repeat Simple_repeat 3 50 0 193 54 0 54 chr20 31458172 31458209 -40695673 + (TCC)n Simple_repeat Simple_repeat 3 37 0 193 54 0 54 chr20 31458258 31458295 -40695587 + (TCC)n Simple_repeat Simple_repeat 3 37 0 225 137 0 59 chr20 31458337 31458388 -40695494 + (TCC)n Simple_repeat Simple_repeat 3 50 0 218 304 89 0 chr20 31458584 31458663 -40695219 + L2 LINE L2 3183 3268 -4 1894 159 3 13 chr20 31459165 31459466 -40694416 - AluSx SINE Alu -14 298 1 199 260 188 10 chr20 31461191 31461287 -40692595 + MIR SINE MIR 117 229 -33 237 341 173 8 chr20 31462264 31462519 -40691363 - L2 LINE L2 -189 3124 2828 182 272 152 11 chr20 31462664 31462756 -40691126 + MIR SINE MIR 48 152 -56 251 229 202 27 chr20 31468160 31468348 -40685534 - L1MC/D LINE L1 -2333 5475 5255 1993 150 7 0 chr20 31468536 31468829 -40685053 - AluSx SINE Alu -13 299 5 265 306 62 14 chr20 31468836 31468927 -40684955 - MARNA DNA Mariner -197 389 287 1992 114 13 45 chr20 31468927 31469235 -40684647 + AluSq SINE Alu 1 298 -15 265 306 62 14 chr20 31469235 31469287 -40684595 - MARNA DNA Mariner -299 287 239 2282 82 0 24 chr20 31469292 31469585 -40684297 + AluSg SINE Alu 1 286 -24 300 253 159 44 chr20 31469733 31469915 -40683967 + L3 LINE CR1 1159 1361 -216 2285 97 0 0 chr20 31470946 31471236 -40682646 + AluSg SINE Alu 1 290 -20 2017 152 14 0 chr20 31471251 31471540 -40682342 + AluSg SINE Alu 3 295 -15 889 206 6 0 chr20 31471549 31471729 -40682153 - L1ME LINE L1 -401 5763 5583 478 48 0 0 chr20 31471736 31471798 -40682084 + AluSc SINE Alu 6 67 -243 1267 152 91 117 chr20 31471798 31472258 -40681624 + LTR7 LTR ERV1 1 448 -2 1953 81 0 0 chr20 31472260 31472494 -40681388 + AluSc SINE Alu 63 296 -13 371 203 0 0 chr20 31472495 31472564 -40681318 - L1ME LINE L1 -583 5583 5515 2244 114 0 16 chr20 31472678 31472985 -40680897 + AluSg SINE Alu 1 302 -8 1157 97 26 0 chr20 31472985 31473140 -40680742 + AluSg/x SINE Alu 134 292 -20 1190 207 113 12 chr20 31473141 31473470 -40680412 + L1MB7 LINE L1 5823 6184 0 2361 225 37 77 chr20 31474090 31474123 -40679759 - L1ME2 LINE L1 -2 6162 6129 7860 80 6 2 chr20 31474123 31475088 -40678794 - LTR5 LTR ERVK 0 969 1 2361 225 37 77 chr20 31475088 31475655 -40678227 - L1ME2 LINE L1 -35 6129 5541 2429 68 0 3 chr20 31475655 31475950 -40677932 + AluY SINE Alu 1 294 -17 2361 225 37 77 chr20 31475950 31476100 -40677782 - L1ME2 LINE L1 -623 5541 5441 716 179 8 0 chr20 31476100 31476223 -40677659 - FLAM_A SINE Alu -9 124 1 2361 225 37 77 chr20 31476223 31476253 -40677629 - L1ME2 LINE L1 -723 5441 5411 1290 206 71 0 chr20 31476458 31476740 -40677142 - MER58B DNA MER1_type -7 334 33 1904 107 0 4 chr20 31477477 31477721 -40676161 + AluSq SINE Alu 1 243 -70 1064 245 124 0 chr20 31478184 31478507 -40675375 - L1ME3A LINE L1 -260 5910 5548 643 224 18 174 chr20 31478899 31479238 -40674644 + MLT1A1 LTR MaLR 7 292 -73 2367 133 53 17 chr20 31479240 31479653 -40674229 - MSTA LTR MaLR 0 428 1 2344 86 41 0 chr20 31480687 31480978 -40672904 + AluSq SINE Alu 1 303 -10 520 278 37 16 chr20 31481195 31481404 -40672478 - L1MC4 LINE L1 -426 7462 7170 313 208 54 107 chr20 31481434 31481531 -40672351 - L1MC4 LINE L1 -895 7147 7059 8104 68 3 4 chr20 31481531 31482501 -40671381 + LTR5 LTR ERVK 1 969 0 313 208 54 107 chr20 31482501 31482552 -40671330 - L1MC4 LINE L1 -983 7059 7007 1955 171 0 3 chr20 31483032 31483336 -40670546 + AluJb SINE Alu 1 303 -9 1182 233 81 83 chr20 31483705 31483958 -40669924 - MER34C LTR ERV1 -6 579 327 1624 201 99 8 chr20 31483958 31484321 -40669561 - MSTD LTR MaLR 0 396 1 1182 233 81 83 chr20 31484321 31484599 -40669283 - MER34C LTR ERV1 -258 327 49 181 176 0 0 chr20 31484643 31484677 -40669205 + L2 LINE L2 2923 2956 -358 2011 115 54 0 chr20 31484692 31484971 -40668911 - AluSx SINE Alu -18 294 1 2249 122 3 0 chr20 31485090 31485401 -40668481 + AluSx SINE Alu 1 312 0 2381 147 40 11 chr20 31485633 31486104 -40667778 - MER31A LTR ERV1 0 485 1 250 202 0 77 chr20 31486283 31486387 -40667495 - L1ME4a LINE L1 -38 6083 5988 299 193 12 60 chr20 31486393 31486476 -40667406 - MER3 DNA MER1_type 0 209 131 410 250 132 7 chr20 31486645 31486797 -40667085 + MIR SINE MIR 34 204 -58 254 311 68 0 chr20 31486929 31487032 -40666850 - L1ME LINE L1 -462 5659 5550 589 267 115 16 chr20 31487328 31487858 -40666024 - LTR65 LTR ERV1 -6 663 14 222 210 0 49 chr20 31488266 31488347 -40665535 + (CCCCG)n Simple_repeat Simple_repeat 2 78 0 2305 87 0 7 chr20 31490136 31490434 -40663448 - AluSg SINE Alu -14 296 1 310 285 14 48 chr20 31491588 31491730 -40662152 + MIR3 SINE MIR 58 194 -14 1910 207 99 94 chr20 31492673 31493407 -40660475 - MER21B LTR ERV1 -125 738 1 738 181 80 27 chr20 31493439 31493627 -40660255 + MLT2D LTR ERVL 217 414 0 1862 109 69 0 chr20 31493655 31493902 -40659980 + AluSq SINE Alu 1 264 -49 327 49 0 0 chr20 31493909 31493950 -40659932 + (TAAAA)n Simple_repeat Simple_repeat 3 43 0 842 241 39 73 chr20 31493982 31494158 -40659724 - L1MD3 LINE L1 -12 8028 7876 1649 111 0 0 chr20 31494158 31494374 -40659508 + AluSg/x SINE Alu 84 299 -13 842 241 39 73 chr20 31494374 31494538 -40659344 - L1MD3 LINE L1 -164 7876 7708 23 33 0 0 chr20 31494623 31494653 -40659229 + AT_rich Low_complexity Low_complexity 1 30 0 194 318 129 12 chr20 31495139 31495224 -40658658 + L3 LINE CR1 1480 1574 -3 2324 101 3 0 chr20 31496022 31496318 -40657564 - AluSq SINE Alu -16 297 1 843 113 0 0 chr20 31496696 31496811 -40657071 + AluSg/x SINE Alu 196 310 0 304 200 67 48 chr20 31497292 31497397 -40656485 - MIR3 SINE MIR -95 113 7 749 165 0 8 chr20 31497833 31497960 -40655922 + FLAM_A SINE Alu 1 126 -7 329 272 0 56 chr20 31498597 31498722 -40655160 - MLT1F1 LTR MaLR -447 120 3 373 238 48 0 chr20 31498726 31498810 -40655072 - L1MD3 LINE L1 -719 7276 7189 321 301 10 10 chr20 31499134 31499237 -40654645 - MIR SINE MIR -148 114 12 33838 75 46 1 chr20 31500786 31505525 -40648357 + L1P LINE L1 3 4953 -1193 1757 185 17 53 chr20 31505524 31505878 -40648004 - L1M3 LINE L1 -538 5645 5306 * 2507 80 0 3 chr20 31505878 31506180 -40647702 - AluY SINE Alu -10 301 1 1757 185 17 53 chr20 31506180 31506303 -40647579 - L1M3 LINE L1 -877 5306 5180 866 127 0 0 chr20 31506318 31506436 -40647446 - AluSq/x SINE Alu -195 118 1 379 176 11 0 chr20 31506436 31506527 -40647355 - L1M3 LINE L1 -959 5187 5096 * 2067 182 124 15 chr20 31506522 31507719 -40646163 + L1MB7 LINE L1 4839 6169 -15 2005 153 10 10 chr20 31507809 31508116 -40645766 - AluJb SINE Alu -5 307 1 622 173 18 50 chr20 31508620 31508840 -40645042 + Charlie1 DNA MER1_type 2493 2705 -56 2367 82 3 13 chr20 31510447 31510787 -40643095 - AluY SINE Alu 0 311 1 1873 126 15 0 chr20 31510818 31511080 -40642802 - AluJo SINE Alu -46 266 1 856 161 21 54 chr20 31514113 31514299 -40639583 - FRAM SINE Alu 0 176 1 941 241 75 4 chr20 31514360 31514625 -40639257 - L1MB7 LINE L1 -72 6112 5829 758 186 0 0 chr20 31519871 31519989 -40633893 + FLAM_C SINE Alu 9 126 -17 1612 138 36 4 chr20 31524758 31525011 -40628871 - AluJb SINE Alu -51 261 1 215 359 0 0 chr20 31525930 31526008 -40627874 + (TG)n Simple_repeat Simple_repeat 1 78 0 243 313 65 19 chr20 31526175 31526389 -40627493 - HAL1b LINE L1 -743 605 382 225 240 0 0 chr20 31526653 31526703 -40627179 + C-rich Low_complexity Low_complexity 2 51 0 1428 229 3 23 chr20 31527649 31527955 -40625927 + AluJo SINE Alu 1 300 -2 1785 177 0 3 chr20 31527988 31528287 -40625595 + AluJo SINE Alu 6 303 -9 348 299 55 16 chr20 31529512 31529639 -40624243 - L1MC5 LINE L1 -158 7803 7672 1934 148 10 3 chr20 31529649 31529959 -40623923 + AluJb SINE Alu 1 312 0 319 340 30 0 chr20 31530023 31530123 -40623759 - L1MC4 LINE L1 -149 7893 7791 301 174 84 42 chr20 31531163 31531330 -40622552 + (CCCTG)n Simple_repeat Simple_repeat 1 174 0 272 220 0 0 chr20 31533413 31533472 -40620410 + G-rich Low_complexity Low_complexity 1 59 0 494 295 30 0 chr20 31533565 31533731 -40620151 - L1MD3 LINE L1 -180 7815 7645 207 0 0 0 chr20 31534607 31534630 -40619252 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 383 218 0 0 chr20 31537138 31537216 -40616666 + LTR49-int LTR ERV1 3261 3338 -2993 413 171 31 78 chr20 31537265 31537394 -40616488 + LTR49-int LTR ERV1 3341 3463 -2868 2102 97 38 0 chr20 31538550 31538840 -40615042 - AluSq SINE Alu -12 301 1 1897 127 31 14 chr20 31539406 31539697 -40614185 + AluJo SINE Alu 1 296 -16 250 184 0 0 chr20 31541819 31541868 -40612014 - MIR SINE MIR -144 118 70 187 184 0 0 chr20 31544470 31544508 -40609374 + L2 LINE L2 3138 3175 -97 2159 107 7 7 chr20 31544844 31545152 -40608730 - AluSc SINE Alu -1 308 1 1630 105 151 0 chr20 31545194 31545452 -40608430 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 31545613 31545634 -40608248 + AT_rich Low_complexity Low_complexity 1 21 0 2323 94 0 3 chr20 31545639 31545946 -40607936 - AluSc SINE Alu -3 306 1 2185 105 3 6 chr20 31546169 31546482 -40607400 + AluSx SINE Alu 1 312 0 1847 157 0 14 chr20 31546663 31546956 -40606926 - AluJb SINE Alu -12 300 12 30 100 0 0 chr20 31548141 31548241 -40605641 + AT_rich Low_complexity Low_complexity 1 100 0 292 110 24 87 chr20 31550937 31551064 -40602818 + (CAGAGA)n Simple_repeat Simple_repeat 6 124 0 1203 233 175 43 chr20 31551385 31551831 -40602051 + MLT1D LTR MaLR 1 505 0 1892 145 0 10 chr20 31552003 31552293 -40601589 - AluSx SINE Alu -25 287 1 1623 177 7 13 chr20 31552337 31552454 -40601428 + AluJb SINE Alu 16 132 -180 10525 40 9 52 chr20 31552454 31553916 -40599966 + SVA Other Other 19 1419 0 1623 177 7 13 chr20 31553916 31554096 -40599786 + AluJb SINE Alu 132 312 0 2169 112 3 0 chr20 31554262 31554558 -40599324 - AluSx SINE Alu -15 297 1 1751 179 3 7 chr20 31554681 31554982 -40598900 + AluJo SINE Alu 1 300 -12 2281 91 3 10 chr20 31556435 31556744 -40597138 - AluSg1 SINE Alu -2 307 1 1490 105 74 39 chr20 31556959 31557216 -40596666 + AluJo SINE Alu 18 283 -29 2088 131 7 0 chr20 31558320 31558626 -40595256 + AluSx SINE Alu 1 308 -4 451 308 57 21 chr20 31559878 31560213 -40593669 + LTR65 LTR ERV1 10 356 -313 530 228 158 0 chr20 31560254 31560425 -40593457 + LTR65 LTR ERV1 472 669 0 180 0 0 0 chr20 31562648 31562668 -40591214 + (TA)n Simple_repeat Simple_repeat 2 21 0 2183 93 0 20 chr20 31562668 31562968 -40590914 - AluSx SINE Alu -16 296 3 1969 136 3 0 chr20 31563012 31563307 -40590575 - AluSx SINE Alu -16 296 1 261 266 0 0 chr20 31563762 31563856 -40590026 + (CA)n Simple_repeat Simple_repeat 2 95 0 1340 172 9 0 chr20 31565286 31565519 -40588363 + AluJb SINE Alu 78 312 0 1332 203 118 55 chr20 31565632 31566071 -40587811 + MLT1C LTR MaLR 1 467 0 2196 110 3 0 chr20 31566074 31566384 -40587498 + AluSx SINE Alu 1 311 -1 315 218 36 0 chr20 31566389 31566499 -40587383 + GA-rich Low_complexity Low_complexity 3 116 0 5888 134 9 22 chr20 31566518 31567471 -40586411 + HUERS-P1 LTR ERV1 5317 6257 -6 2253 97 0 0 chr20 31567473 31567771 -40586111 + AluSg SINE Alu 2 299 -11 3830 102 21 61 chr20 31567780 31568389 -40585493 + LTR8 LTR ERV1 1 585 -106 43058 36 23 1 chr20 31570235 31576256 -40577626 + L1PA3 LINE L1 1 6155 0 306 254 10 129 chr20 31576465 31576658 -40577224 + L1ME4a LINE L1 5930 6099 -22 1796 157 0 13 chr20 31577265 31577578 -40576304 + AluJb SINE Alu 1 309 -3 218 196 0 43 chr20 31577828 31577874 -40576008 - L2 LINE L2 -4 3268 3225 514 250 39 32 chr20 31579270 31579426 -40574456 + L1ME3 LINE L1 6003 6159 -3 1528 175 66 113 chr20 31580329 31580878 -40573004 - Charlie1b DNA MER1_type 0 523 1 1457 209 39 3 chr20 31580958 31581289 -40572593 + L1ME1 LINE L1 5820 6162 -4 559 339 56 5 chr20 31581727 31581922 -40571960 + MIR SINE MIR 6 210 -52 278 167 0 0 chr20 31582298 31582346 -40571536 + L1ME1 LINE L1 5649 5696 -468 380 82 0 4 chr20 31582346 31582409 -40571473 + AluSp/q SINE Alu 249 303 0 958 174 26 0 chr20 31582410 31582600 -40571282 + L1ME1 LINE L1 5691 5885 -281 880 128 0 123 chr20 31582686 31582865 -40571017 + Tigger1 DNA MER2_type 1 157 -2261 1418 179 56 18 chr20 31582877 31583162 -40570720 - AluJo SINE Alu -5 307 12 1107 204 0 14 chr20 31583164 31583380 -40570502 - AluSx SINE Alu -99 213 1 287 64 0 21 chr20 31583380 31583427 -40570455 + Tigger1 DNA MER2_type 2220 2265 -153 5812 181 61 62 chr20 31583428 31583691 -40570191 + L1MC3 LINE L1 3421 3683 -4102 521 222 0 0 chr20 31583691 31583790 -40570092 + FLAM_A SINE Alu 1 99 -43 5812 181 61 62 chr20 31583790 31583808 -40570074 + L1MC3 LINE L1 3683 3700 -4085 1904 122 36 7 chr20 31583808 31584112 -40569770 + AluSq SINE Alu 1 313 0 5812 181 61 62 chr20 31584112 31585372 -40568510 + L1MC3 LINE L1 3700 4960 -2825 2168 107 0 0 chr20 31585372 31585670 -40568212 - AluY SINE Alu -13 298 1 5812 181 61 62 chr20 31585670 31586932 -40566950 + L1MC3 LINE L1 4960 6222 -1563 2223 84 3 3 chr20 31586932 31587229 -40566653 - AluY SINE Alu -14 297 1 5812 181 61 62 chr20 31587229 31587251 -40566631 + L1MC3 LINE L1 6222 7785 0 1031 199 5 23 chr20 31587828 31588044 -40565838 + AluJo SINE Alu 1 212 -100 2147 98 0 3 chr20 31588217 31588514 -40565368 + AluSc SINE Alu 3 298 -11 192 40 0 0 chr20 31588732 31588757 -40565125 + (A)n Simple_repeat Simple_repeat 1 25 0 826 223 0 0 chr20 31588760 31588917 -40564965 + FAM SINE Alu 1 157 -18 2483 52 0 7 chr20 31589089 31589397 -40564485 + AluY SINE Alu 4 309 -2 3869 138 6 16 chr20 31589570 31590217 -40563665 + L1MB4 LINE L1 5540 6180 0 226 255 122 43 chr20 31590330 31590585 -40563297 + L1M4 LINE L1 3923 4197 -1949 2324 128 34 3 chr20 31590597 31590950 -40562932 + THE1B LTR MaLR 1 364 0 428 125 97 0 chr20 31590967 31591039 -40562843 + MER72 LTR ERV1 2 80 -642 459 0 0 0 chr20 31591245 31591296 -40562586 + (CA)n Simple_repeat Simple_repeat 1 51 0 272 320 87 0 chr20 31591500 31591603 -40562279 + L2 LINE L2 3182 3293 -20 312 327 28 9 chr20 31591776 31591883 -40561999 - MER5B DNA MER1_type -14 164 56 1692 108 62 0 chr20 31591926 31592214 -40561668 + AluSp SINE Alu 7 310 0 2103 128 0 0 chr20 31592271 31592577 -40561305 - AluSx SINE Alu -6 306 1 2203 98 0 3 chr20 31592577 31592874 -40561008 - AluSx SINE Alu -15 297 2 432 182 20 13 chr20 31593047 31593295 -40560587 + AluJo SINE Alu 1 282 -30 24 67 0 0 chr20 31595025 31595070 -40558812 + AT_rich Low_complexity Low_complexity 1 45 0 2271 86 7 0 chr20 31595838 31596142 -40557740 - AluSc SINE Alu -3 306 1 553 217 17 9 chr20 31597146 31597261 -40556621 + FLAM_C SINE Alu 7 122 -21 1856 160 0 0 chr20 31598014 31598301 -40555581 + AluJb SINE Alu 1 287 -25 436 252 139 54 chr20 31598331 31598589 -40555293 + L1MC/D LINE L1 5499 5778 -2030 22 0 0 0 chr20 31599385 31599407 -40554475 + AT_rich Low_complexity Low_complexity 1 22 0 2586 26 0 10 chr20 31599425 31599731 -40554151 + AluY SINE Alu 1 303 -8 1811 148 0 4 chr20 31599879 31600156 -40553726 - AluSx SINE Alu -36 276 1 2437 77 0 3 chr20 31600514 31600825 -40553057 - AluSg SINE Alu 0 310 1 690 264 287 10 chr20 31600850 31601335 -40552547 + HAL1 LINE L1 8 626 -1881 542 127 0 0 chr20 31601683 31601762 -40552120 - AluY SINE Alu -14 297 219 310 309 36 58 chr20 31601814 31601953 -40551929 - L1 LINE L1 -1725 4421 4286 2325 80 0 0 chr20 31601959 31602270 -40551612 + AluY SINE Alu 1 311 0 1978 117 7 17 chr20 31602280 31602578 -40551304 + AluSx SINE Alu 3 297 -15 1978 101 22 0 chr20 31602578 31602856 -40551026 + AluSg1 SINE Alu 1 284 -25 387 98 0 0 chr20 31602864 31602925 -40550957 + (GGGGA)n Simple_repeat Simple_repeat 5 65 0 2213 94 7 0 chr20 31602950 31603258 -40550624 - AluSp SINE Alu -3 310 1 258 222 0 0 chr20 31603435 31603480 -40550402 - L2 LINE L2 -1 3312 3268 2136 103 7 0 chr20 31603501 31603802 -40550080 - AluSc SINE Alu -6 303 1 2037 128 7 0 chr20 31603870 31604174 -40549708 + AluSq SINE Alu 1 306 -7 1748 139 145 36 chr20 31604541 31604928 -40548954 - MSTB1 LTR MaLR 0 432 4 256 291 19 39 chr20 31605242 31605345 -40548537 + MLT1J LTR MaLR 75 175 -336 1245 231 216 39 chr20 31605530 31606054 -40547828 - L1MC4a LINE L1 -1761 6047 5379 1549 173 34 0 chr20 31606054 31606320 -40547562 + AluJb SINE Alu 3 277 -35 1245 231 216 39 chr20 31606320 31606461 -40547421 - L1MC4a LINE L1 -2429 5379 5264 2082 97 35 0 chr20 31606557 31606847 -40547035 - AluSp SINE Alu -9 304 5 254 345 10 31 chr20 31606962 31607156 -40546726 - L1MC4a LINE L1 -1162 4984 4795 3583 158 48 14 chr20 31607697 31608363 -40545519 - L1MB3 LINE L1 -20 6163 5475 1401 208 31 0 chr20 31609133 31609421 -40544461 + AluJo SINE Alu 4 300 -12 1028 153 61 5 chr20 31609422 31609618 -40544264 - L1MB3 LINE L1 -710 5470 5264 445 295 43 82 chr20 31609618 31609899 -40543983 - MLT1I LTR MaLR -14 395 126 573 147 0 176 chr20 31610065 31610235 -40543647 + FLAM_C SINE Alu 2 141 -2 705 244 62 21 chr20 31610918 31611111 -40542771 + MIR SINE MIR 62 262 0 847 128 15 15 chr20 31611136 31611269 -40542613 - FLAM_C SINE Alu 0 133 1 515 183 0 11 chr20 31612040 31612133 -40541749 - AluJ/FLAM SINE Alu -218 94 3 336 215 47 37 chr20 31612137 31612244 -40541638 - L1MEc LINE L1 -3064 3151 3044 772 252 0 0 chr20 31612291 31612450 -40541432 - FRAM SINE Alu -6 160 2 343 170 6 214 chr20 31612453 31612501 -40541381 - L1MEc LINE L1 -4682 1714 1658 1298 163 107 69 chr20 31612501 31612790 -40541092 - AluJb SINE Alu -2 300 1 343 170 6 214 chr20 31612790 31612923 -40540959 - L1MEc LINE L1 -4738 1658 1571 2903 183 58 16 chr20 31612923 31613492 -40540390 + MER7C DNA MER2_type 1 593 -9 2028 137 0 0 chr20 31613550 31613856 -40540026 + AluSx SINE Alu 1 306 -6 582 324 37 17 chr20 31613912 31614211 -40539671 - L1MEc LINE L1 -4893 1503 1199 1304 181 32 28 chr20 31614212 31614494 -40539388 - AluJb SINE Alu -12 300 18 554 247 84 59 chr20 31614612 31614779 -40539103 - L1MEc LINE L1 -5284 1112 934 2225 78 3 23 chr20 31614779 31615085 -40538797 - AluSp SINE Alu -13 300 1 554 247 84 59 chr20 31615085 31615204 -40538678 - L1MEc LINE L1 -5462 934 819 2216 180 16 0 chr20 31615204 31615588 -40538294 + MLT1B LTR MaLR 1 390 0 1369 238 112 5 chr20 31615664 31616038 -40537844 - L1MEc LINE L1 -5889 507 94 2208 70 3 3 chr20 31616126 31616432 -40537450 + AluY SINE Alu 1 306 0 488 244 52 66 chr20 31616888 31617101 -40536781 + L2 LINE L2 3103 3312 -1 1745 146 61 20 chr20 31617636 31617979 -40535903 - MSTC LTR MaLR -2 426 70 2193 97 0 3 chr20 31617981 31618281 -40535601 - AluSc SINE Alu -10 299 1 282 106 0 167 chr20 31618310 31618376 -40535506 - MSTC LTR MaLR -337 59 5 298 253 187 0 chr20 31618586 31618677 -40535205 + L2 LINE L2 3160 3267 -5 180 0 0 0 chr20 31618983 31619003 -40534879 + (T)n Simple_repeat Simple_repeat 1 20 0 634 302 117 3 chr20 31619630 31619921 -40533961 + L2 LINE L2 1347 1670 -1644 1021 188 160 4 chr20 31620008 31620258 -40533624 - AluJb SINE Alu -6 306 18 335 227 0 59 chr20 31620377 31620496 -40533386 - L1MEc LINE L1 -5285 1111 1000 516 93 0 0 chr20 31620545 31620620 -40533262 - AluSp/q SINE Alu -11 302 228 22 0 0 0 chr20 31620699 31620721 -40533161 + AT_rich Low_complexity Low_complexity 1 22 0 442 244 446 15 chr20 31620751 31621469 -40532413 + L2 LINE L2 1729 2755 -559 1996 108 0 58 chr20 31621912 31622237 -40531645 - AluSx SINE Alu 0 312 7 266 304 193 0 chr20 31622298 31622433 -40531449 - MIR SINE MIR -12 250 90 205 250 0 0 chr20 31622812 31622852 -40531030 + polypurine Low_complexity Low_complexity 1 40 0 2356 66 0 44 chr20 31623824 31623959 -40529923 + AluSg SINE Alu 1 140 -170 2256 100 0 3 chr20 31623959 31624269 -40529613 + AluSg SINE Alu 1 309 -1 2356 66 0 44 chr20 31624269 31624453 -40529429 + AluSg SINE Alu 140 306 -4 180 77 0 0 chr20 31624688 31624714 -40529168 + (CA)n Simple_repeat Simple_repeat 2 27 0 1735 181 3 0 chr20 31624748 31625058 -40528824 + AluJb SINE Alu 1 311 -1 360 331 0 0 chr20 31625069 31625199 -40528683 + Charlie8 DNA MER1_type 134 263 -2154 204 40 0 0 chr20 31625239 31625264 -40528618 + (TG)n Simple_repeat Simple_repeat 2 26 0 2189 93 23 0 chr20 31625341 31625641 -40528241 + AluSp SINE Alu 1 307 -6 603 197 17 8 chr20 31625857 31625974 -40527908 + FLAM_C SINE Alu 9 126 -17 234 0 0 0 chr20 31625975 31626001 -40527881 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr20 31626044 31626072 -40527810 + AT_rich Low_complexity Low_complexity 1 28 0 2214 73 0 10 chr20 31626102 31626417 -40527465 + AluY SINE Alu 1 312 0 417 257 103 62 chr20 31626467 31626535 -40527347 + L1M4 LINE L1 3658 3722 -2424 2336 65 3 10 chr20 31626535 31626845 -40527037 - AluY SINE Alu -3 308 1 417 257 103 62 chr20 31626845 31626883 -40526999 + L1M4 LINE L1 3722 3757 -2389 2086 118 3 3 chr20 31626883 31627189 -40526693 + AluSq SINE Alu 1 306 -7 417 257 103 62 chr20 31627189 31627564 -40526318 + L1M4 LINE L1 3757 4160 -1986 1387 127 33 118 chr20 31627564 31627894 -40525988 + AluSx SINE Alu 1 302 0 584 156 73 0 chr20 31627932 31628028 -40525854 + AluJb SINE Alu 190 292 -20 2331 67 7 0 chr20 31628046 31628345 -40525537 + AluSg SINE Alu 1 301 -9 476 264 174 0 chr20 31628580 31628735 -40525147 - L2 LINE L2 0 3313 3132 2213 65 3 56 chr20 31629066 31629390 -40524492 - AluSp SINE Alu -5 308 2 23 33 0 0 chr20 31630759 31630789 -40523093 + GC_rich Low_complexity Low_complexity 1 30 0 2424 49 10 3 chr20 31632006 31632313 -40521569 - AluY SINE Alu -2 309 1 998 133 0 30 chr20 31632442 31632607 -40521275 + AluSx SINE Alu 1 160 -152 1192 104 6 6 chr20 31632637 31632650 -40521232 + AluSc SINE Alu 119 131 -178 1949 131 0 7 chr20 31632650 31632948 -40520934 + AluSc SINE Alu 1 296 -13 1192 104 6 6 chr20 31632948 31633116 -40520766 + AluSc SINE Alu 130 300 -9 888 165 0 47 chr20 31633119 31633289 -40520593 + FRAM SINE Alu 1 162 -14 2230 58 0 49 chr20 31633449 31633776 -40520106 + AluY SINE Alu 1 311 0 1215 279 127 21 chr20 31633882 31634417 -40519465 + L2 LINE L2 2221 2812 -502 2240 151 12 60 chr20 31634484 31634915 -40518967 - LTR3 LTR ERVK -22 410 1 48207 119 15 23 chr20 31634917 31637829 -40516053 - HERVK3 LTR ERVK -2 7241 4307 1855 91 94 7 chr20 31637829 31638105 -40515777 + AluSg SINE Alu 1 300 -10 48207 119 15 23 chr20 31638105 31641217 -40512665 - HERVK3 LTR ERVK -2936 4307 1171 2469 71 0 0 chr20 31641217 31641526 -40512356 + AluY SINE Alu 1 309 -2 48207 119 15 23 chr20 31641526 31642399 -40511483 - HERVK3 LTR ERVK -6072 1171 404 2210 87 7 3 chr20 31642399 31642698 -40511184 + AluSc SINE Alu 1 300 -9 48207 119 15 23 chr20 31642698 31643097 -40510785 - HERVK3 LTR ERVK -6839 404 3 2396 147 7 55 chr20 31643120 31643557 -40510325 - LTR3 LTR ERVK -16 416 1 521 254 207 39 chr20 31643557 31643943 -40509939 + L2 LINE L2 2831 3281 -32 4432 161 51 35 chr20 31643943 31644821 -40509061 + MER4D LTR ERV1 1 892 -11 3738 134 20 84 chr20 31645097 31645183 -40508699 - LTR8 LTR ERV1 0 691 601 1993 102 0 34 chr20 31645183 31645370 -40508512 - AluSx SINE Alu 0 320 146 2122 101 14 7 chr20 31645370 31645667 -40508215 - AluSx SINE Alu -11 301 3 1993 102 0 34 chr20 31645667 31645809 -40508073 - AluSx SINE Alu -174 146 1 3738 134 20 84 chr20 31645809 31646459 -40507423 - LTR8 LTR ERV1 -90 601 1 1615 155 14 3 chr20 31646473 31646763 -40507119 + AluSq SINE Alu 2 294 -19 2408 44 0 7 chr20 31646893 31647188 -40506694 + AluY SINE Alu 2 294 -17 273 68 227 0 chr20 31647439 31647483 -40506399 + MIR SINE MIR 79 132 -130 650 233 106 47 chr20 31648492 31648728 -40505154 + MIR SINE MIR 11 260 -2 494 279 53 62 chr20 31648800 31648861 -40505021 - MIR SINE MIR -36 226 166 575 205 24 0 chr20 31648861 31648988 -40504894 + FLAM_C SINE Alu 1 130 -3 494 279 53 62 chr20 31648988 31649152 -40504730 - MIR SINE MIR -96 166 3 250 311 127 40 chr20 31649500 31649879 -40504003 - L2 LINE L2 -559 2755 2344 * 299 324 11 91 chr20 31649874 31650050 -40503832 - MIR3 SINE MIR -34 174 13 202 261 165 26 chr20 31650162 31650277 -40503605 - MIR3 SINE MIR -64 144 14 2105 102 0 0 chr20 31650345 31650640 -40503242 + AluY SINE Alu 1 295 -16 2172 94 3 7 chr20 31650841 31651148 -40502734 - AluSq SINE Alu -7 306 1 1671 188 10 13 chr20 31651277 31651581 -40502301 + AluJb SINE Alu 1 303 -9 1788 141 0 42 chr20 31651802 31651946 -40501936 + AluSx SINE Alu 1 149 -163 2077 114 10 10 chr20 31651946 31652243 -40501639 + AluSq SINE Alu 1 297 -16 1788 141 0 42 chr20 31652243 31652410 -40501472 + AluSx SINE Alu 149 299 -13 2166 93 0 3 chr20 31652557 31652848 -40501034 + AluSx SINE Alu 1 290 -22 1433 204 143 49 chr20 31652936 31653044 -40500838 - L1MB5 LINE L1 -4 6162 6065 371 94 0 0 chr20 31653044 31653108 -40500774 + L1MA3 LINE L1 6242 6305 0 1433 204 143 49 chr20 31653108 31653216 -40500666 - L1MB5 LINE L1 -101 6065 5968 225 103 0 0 chr20 31653216 31653245 -40500637 - MER58 DNA MER1_type -6 2414 2386 1433 204 143 49 chr20 31653245 31653342 -40500540 - L1MB5 LINE L1 -198 5968 5881 2036 103 41 3 chr20 31653342 31653634 -40500248 - AluSq SINE Alu -10 303 1 1433 204 143 49 chr20 31653634 31653957 -40499925 - L1MB5 LINE L1 -285 5881 5449 2293 92 3 0 chr20 31654195 31654498 -40499384 + AluSg SINE Alu 1 304 -6 1312 216 40 7 chr20 31654714 31655011 -40498871 + AluJo SINE Alu 1 307 -5 325 357 34 34 chr20 31655296 31655587 -40498295 + L3 LINE CR1 551 841 -736 779 293 83 58 chr20 31655594 31655689 -40498193 - L2 LINE L2 0 3313 3222 2195 86 10 7 chr20 31655689 31655991 -40497891 + AluSp SINE Alu 1 303 -10 779 293 83 58 chr20 31655991 31656362 -40497520 - L2 LINE L2 -91 3222 2835 285 196 0 18 chr20 31656700 31656756 -40497126 + L2 LINE L2 3200 3254 -18 347 230 40 63 chr20 31657626 31657752 -40496130 - L1MC5 LINE L1 -30 7931 7809 2046 120 7 0 chr20 31657859 31658151 -40495731 + AluSq SINE Alu 1 294 -19 358 271 150 21 chr20 31658841 31658981 -40494901 + MIR SINE MIR 7 164 -98 754 225 25 148 chr20 31658991 31659417 -40494465 - MER21B LTR ERV1 -227 349 6 710 43 0 0 chr20 31659551 31659645 -40494237 + L1PA8 LINE L1 6076 6169 -3 2001 118 3 0 chr20 31659948 31660244 -40493638 - AluSg SINE Alu -12 298 2 28 0 0 26 chr20 31660412 31660430 -40493452 + AT_rich Low_complexity Low_complexity 1 18 -20 2076 115 0 0 chr20 31660430 31660717 -40493165 - AluSg SINE Alu -23 287 1 28 0 0 26 chr20 31660717 31660737 -40493145 + AT_rich Low_complexity Low_complexity 18 38 0 1500 126 0 9 chr20 31660866 31661096 -40492786 + AluSg/x SINE Alu 82 309 -1 544 330 73 4 chr20 31661357 31661590 -40492292 + MIR SINE MIR 14 262 0 298 279 100 21 chr20 31662386 31662526 -40491356 - L1ME3A LINE L1 -26 6144 5994 1578 169 6 54 chr20 31662579 31662892 -40490990 + AluJb SINE Alu 3 300 -12 349 214 56 84 chr20 31662917 31663060 -40490822 - L1ME3A LINE L1 -196 5968 5829 2024 106 3 10 chr20 31663060 31663362 -40490520 - AluSp SINE Alu -13 300 1 349 214 56 84 chr20 31663362 31663396 -40490486 - L1ME3A LINE L1 -335 5829 5796 1892 134 10 0 chr20 31663399 31663697 -40490185 - AluSx SINE Alu -11 301 1 1056 71 0 0 chr20 31663742 31663882 -40490000 - AluY SINE Alu 0 311 172 2278 77 6 10 chr20 31663887 31664199 -40489683 - AluY SINE Alu 0 311 1 1121 253 133 21 chr20 31664199 31664725 -40489157 - L1ME3A LINE L1 -1087 5059 4475 1472 197 3 10 chr20 31664731 31664798 -40489084 - L1MB7 LINE L1 0 6184 6118 662 246 183 27 chr20 31664798 31665136 -40488746 - L1MD3 LINE L1 -1867 6128 5738 327 307 36 36 chr20 31665247 31665387 -40488495 + L2 LINE L2 3174 3313 0 391 268 242 22 chr20 31665646 31665915 -40487967 + L1MC4a LINE L1 5897 6224 -1584 2640 145 28 147 chr20 31666110 31666567 -40487315 - L1MB3 LINE L1 -83 6336 5826 1675 100 38 0 chr20 31666567 31666807 -40487075 + AluSp SINE Alu 1 249 -64 2168 96 3 0 chr20 31666809 31667110 -40486772 - AluSp SINE Alu -11 302 1 2640 145 28 147 chr20 31667110 31667446 -40486436 - L1MB3 LINE L1 -594 5825 5722 669 91 10 20 chr20 31667453 31667552 -40486330 - AluSq SINE Alu -15 298 201 1525 90 66 0 chr20 31667557 31667769 -40486113 - AluSq SINE Alu -87 226 1 7735 191 42 86 chr20 31667772 31668155 -40485727 - L1MB3 LINE L1 -693 5723 5325 2221 106 0 3 chr20 31668155 31668458 -40485424 - AluSq SINE Alu -11 302 1 7735 191 42 86 chr20 31668458 31668679 -40485203 - L1MB3 LINE L1 -1091 5325 5096 2460 61 0 3 chr20 31668679 31668989 -40484893 - AluY SINE Alu -2 309 1 7735 191 42 86 chr20 31668989 31669262 -40484620 - L1MB3 LINE L1 -1320 5096 4812 2253 99 3 3 chr20 31669262 31669574 -40484308 - AluSx SINE Alu 0 312 1 7735 191 42 86 chr20 31669574 31670201 -40483681 - L1MB3 LINE L1 -1604 4812 4159 2059 129 0 0 chr20 31670201 31670496 -40483386 - AluSg SINE Alu -15 295 1 7735 191 42 86 chr20 31670496 31670812 -40483070 - L1MB3 LINE L1 -2257 4159 3830 2276 86 3 0 chr20 31670812 31671115 -40482767 - AluSp SINE Alu -9 304 1 7735 191 42 86 chr20 31671115 31671847 -40482035 - L1MB3 LINE L1 -2586 3830 3067 1976 142 0 3 chr20 31671847 31672157 -40481725 - AluSx SINE Alu -3 309 1 1985 123 3 17 chr20 31672157 31672457 -40481425 - AluSx SINE Alu -16 296 1 7735 191 42 86 chr20 31672457 31672584 -40481298 - L1MB3 LINE L1 -3127 3289 3158 1128 114 48 0 chr20 31672589 31672755 -40481127 - AluSg/x SINE Alu -5 307 134 2243 98 0 0 chr20 31672755 31673051 -40480831 - AluSx SINE Alu -15 297 2 252 184 101 0 chr20 31673075 31673184 -40480698 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 1293 167 33 84 chr20 31673185 31673636 -40480246 - L1MB3 LINE L1 -3734 2648 2224 1421 191 11 11 chr20 31673640 31673922 -40479960 + MER2 DNA MER2_type 39 320 -25 2361 132 203 93 chr20 31673930 31674285 -40479597 - L1MB3 LINE L1 -4167 2217 1903 1647 151 7 11 chr20 31674285 31674563 -40479319 + AluSx SINE Alu 1 277 -35 2361 132 203 93 chr20 31674563 31674659 -40479223 - L1MB3 LINE L1 -4481 1903 1819 907 208 25 121 chr20 31674659 31674725 -40479157 - MLT1A1 LTR MaLR 0 365 294 1538 187 10 23 chr20 31674725 31675030 -40478852 - AluJo SINE Alu -11 301 1 907 208 25 121 chr20 31675030 31675367 -40478515 - MLT1A1 LTR MaLR -71 294 1 2361 132 203 93 chr20 31675367 31675583 -40478299 - L1MB3 LINE L1 -4565 1819 1475 834 196 22 17 chr20 31675583 31675762 -40478120 - AluJo SINE Alu -14 298 119 2028 101 0 24 chr20 31675763 31676051 -40477831 + AluSg SINE Alu 1 281 -29 1284 97 5 46 chr20 31676051 31676246 -40477636 - AluSq SINE Alu -126 187 1 475 281 139 7 chr20 31676520 31676823 -40477059 - HAL1 LINE L1 -924 1583 1241 639 154 17 0 chr20 31676997 31677114 -40476768 - L1MB2 LINE L1 -4 6167 6049 2140 199 55 4 chr20 31677120 31677612 -40476270 - L1MA9 LINE L1 -5 6307 5791 1966 153 24 18 chr20 31677623 31677963 -40475919 - MER2 DNA MER2_type 0 344 3 1542 163 176 0 chr20 31677972 31678267 -40475615 + MER7A DNA MER2_type 2 346 0 1894 150 177 0 chr20 31678305 31678666 -40475216 - MER83 LTR ERV1 0 448 24 1381 204 18 98 chr20 31678677 31679127 -40474755 - L1MA9 LINE L1 -981 5165 4752 7918 80 6 21 chr20 31681053 31682127 -40471755 + MER11C LTR ERVK 1 1057 -14 1341 141 0 9 chr20 31682805 31683032 -40470850 - AluJb SINE Alu -1 311 87 1017 142 6 34 chr20 31683389 31683565 -40470317 - AluJo SINE Alu -17 295 125 386 173 0 27 chr20 31683905 31683980 -40469902 - MER116 DNA Mariner -1 79 7 213 255 0 0 chr20 31684197 31684248 -40469634 + MIR SINE MIR 159 209 -53 480 261 113 55 chr20 31684304 31684340 -40469542 - L1ME4a LINE L1 -270 5851 5819 1670 165 3 29 chr20 31684340 31684649 -40469233 + AluJo SINE Alu 1 301 -11 480 261 113 55 chr20 31684649 31684923 -40468959 - L1ME4a LINE L1 -302 5819 5523 300 235 88 29 chr20 31685001 31685103 -40468779 - L1ME4a LINE L1 -2387 5398 5291 2022 128 3 0 chr20 31685222 31685518 -40468364 + AluSx SINE Alu 1 297 -15 741 236 6 12 chr20 31685635 31685796 -40468086 - FRAM SINE Alu -20 156 1 1695 174 7 7 chr20 31687001 31687305 -40466577 - AluJo SINE Alu -8 304 1 309 118 0 0 chr20 31687719 31687770 -40466112 + (TA)n Simple_repeat Simple_repeat 1 51 0 2065 113 7 0 chr20 31688736 31689037 -40464845 + AluSg SINE Alu 1 303 -7 1686 176 0 3 chr20 31689122 31689406 -40464476 + AluJo SINE Alu 1 283 -29 1690 158 22 0 chr20 31689453 31689731 -40464151 - MER2 DNA MER2_type -61 284 1 269 297 69 40 chr20 31690057 31690158 -40463724 - L2 LINE L2 0 3272 3169 288 266 71 33 chr20 31690158 31690342 -40463540 + L1MC/D LINE L1 5666 5856 -1952 325 300 20 10 chr20 31690346 31690446 -40463436 + L1ME LINE L1 89 189 -5930 1420 171 82 7 chr20 31690467 31690747 -40463135 + AluJo SINE Alu 1 301 -11 460 265 60 56 chr20 31691196 31691498 -40462384 + L1ME LINE L1 709 1011 -5108 354 302 75 12 chr20 31691517 31691778 -40462104 + L1ME LINE L1 1063 1381 -4862 498 105 12 47 chr20 31691781 31691867 -40462015 + L1MD1 LINE L1 6159 6241 -1 489 256 33 38 chr20 31691840 31692051 -40461831 + L1ME LINE L1 1350 1559 -4751 * 227 261 27 5 chr20 31692106 31692222 -40461660 - L2 LINE L2 -7 3306 3130 886 246 115 35 chr20 31692421 31692656 -40461226 - L1ME3A LINE L1 -9 6161 5946 1700 130 95 0 chr20 31692656 31692940 -40460942 - AluJb SINE Alu -1 311 1 886 246 115 35 chr20 31692940 31693103 -40460779 - L1ME3A LINE L1 -224 5946 5731 349 312 135 6 chr20 31693152 31693322 -40460560 + L1ME LINE L1 1541 1732 -4578 657 296 62 35 chr20 31693328 31693559 -40460323 + L1ME LINE L1 1781 2004 -4125 2301 87 3 0 chr20 31693559 31693859 -40460023 - AluSx SINE Alu -11 301 1 657 296 62 35 chr20 31693859 31694280 -40459602 + L1ME LINE L1 2004 2409 -3720 455 276 74 25 chr20 31695641 31695804 -40458078 - MIR SINE MIR -72 190 20 201 277 106 57 chr20 31695881 31696022 -40457860 + MIR3 SINE MIR 4 151 -57 186 133 0 0 chr20 31696279 31696309 -40457573 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 2148 102 129 69 chr20 31696366 31696601 -40457281 - MSTA LTR MaLR 0 428 158 2122 102 3 16 chr20 31696601 31696915 -40456967 + AluY SINE Alu 1 310 -1 2148 102 129 69 chr20 31696915 31697083 -40456799 - MSTA LTR MaLR -270 158 1 9098 169 32 18 chr20 31697098 31698712 -40455170 - MSTA-int LTR MaLR -14 1637 1 2224 118 136 16 chr20 31698712 31699094 -40454788 - MSTA LTR MaLR 0 428 1 235 293 81 0 chr20 31699131 31699230 -40454652 - MER94 DNA DNA -26 108 2 944 126 52 13 chr20 31700080 31700255 -40453627 - MSTA LTR MaLR -84 342 146 1115 221 159 24 chr20 31703271 31703693 -40450189 - MLT1G LTR MaLR -144 446 1 382 261 85 55 chr20 31705410 31705717 -40448165 + L1MC5 LINE L1 7298 7613 -348 1753 201 25 3 chr20 31705844 31706202 -40447680 + MER47A DNA MER2_type 1 366 0 1993 121 0 0 chr20 31706404 31706693 -40447189 - AluSg1 SINE Alu -20 289 1 315 192 0 0 chr20 31706892 31706970 -40446912 + (TCCA)n Simple_repeat Simple_repeat 3 80 0 2508 183 48 6 chr20 31707059 31707563 -40446319 - L1MA9 LINE L1 -5 6307 5783 180 0 0 0 chr20 31708485 31708505 -40445377 + (GGGA)n Simple_repeat Simple_repeat 3 22 0 230 350 66 7 chr20 31708885 31709022 -40444860 + MIR SINE MIR 29 173 -89 3036 108 12 9 chr20 31709709 31710136 -40443746 - MSTA LTR MaLR 0 428 1 1956 141 0 0 chr20 31710393 31710690 -40443192 + AluSx SINE Alu 1 297 -15 1092 197 27 0 chr20 31710747 31710970 -40442912 + AluJb SINE Alu 1 229 -83 234 0 0 0 chr20 31712703 31712729 -40441153 + (T)n Simple_repeat Simple_repeat 1 26 0 292 274 150 0 chr20 31715601 31715714 -40438168 + MIR SINE MIR 28 157 -105 2043 120 10 7 chr20 31716502 31716810 -40437072 - AluSx SINE Alu -3 309 1 302 272 66 41 chr20 31717604 31717779 -40436103 - MIR3 SINE MIR -33 175 11 246 256 96 45 chr20 31719750 31719906 -40433976 - L1ME4a LINE L1 -3 6118 5955 2246 63 35 3 chr20 31719933 31720217 -40433665 + AluY SINE Alu 1 293 -18 252 242 0 91 chr20 31720238 31720337 -40433545 - L1ME4a LINE L1 -302 5819 5730 2463 71 0 0 chr20 31722088 31722396 -40431486 - AluY SINE Alu -3 308 1 1123 220 57 21 chr20 31723776 31724148 -40429734 - Charlie1b DNA MER1_type -26 497 113 2177 94 0 17 chr20 31724151 31724448 -40429434 + AluSg SINE Alu 1 292 -18 27 0 0 0 chr20 31725448 31725475 -40428407 + AT_rich Low_complexity Low_complexity 1 27 0 324 228 70 70 chr20 31726458 31726572 -40427310 - L1MD3 LINE L1 -2 7993 7880 535 225 37 48 chr20 31726653 31726840 -40427042 + L1MC4 LINE L1 7477 7661 -381 276 183 87 26 chr20 31726992 31727107 -40426775 + L1M4 LINE L1 5204 5325 -821 1258 258 146 50 chr20 31727525 31728346 -40425536 - L1MC4 LINE L1 -411 7631 6732 495 94 24 0 chr20 31728490 31728575 -40425307 - L1PA16 LINE L1 -1 6165 6079 530 223 112 20 chr20 31728600 31728797 -40425085 - MLT1G1 LTR MaLR -283 312 98 2371 90 0 3 chr20 31729312 31729622 -40424260 - AluSc SINE Alu 0 309 1 2182 113 3 13 chr20 31729622 31729933 -40423949 - AluSq SINE Alu -5 308 1 1971 136 0 37 chr20 31730024 31730347 -40423535 + AluSx SINE Alu 1 311 -1 2117 93 9 37 chr20 31734427 31734748 -40419134 + AluSx SINE Alu 1 312 0 1458 98 59 0 chr20 31736881 31737085 -40416797 - AluSq SINE Alu -97 216 1 1041 139 42 29 chr20 31737149 31737387 -40416495 - L1 LINE L1 -2391 3755 3515 1232 89 0 0 chr20 31737396 31737564 -40416318 - AluSg/x SINE Alu 0 312 145 2265 81 17 7 chr20 31737596 31737893 -40415989 + AluSq SINE Alu 5 304 -9 1210 96 0 24 chr20 31737893 31738059 -40415823 + AluSg/x SINE Alu 132 293 -17 317 289 21 41 chr20 31738060 31738157 -40415725 - L1MDa LINE L1 -4549 1991 1897 735 264 109 28 chr20 31738282 31738604 -40415278 - MLT1D LTR MaLR -30 475 128 1790 151 20 10 chr20 31738762 31738956 -40414926 - AluSx SINE Alu 0 312 127 438 20 0 0 chr20 31738956 31739007 -40414875 + (TG)n Simple_repeat Simple_repeat 2 52 0 1790 151 20 10 chr20 31739007 31739136 -40414746 - AluSx SINE Alu -185 127 1 534 12 75 0 chr20 31739138 31739218 -40414664 + T-rich Low_complexity Low_complexity 4 89 0 759 139 0 62 chr20 31739220 31739349 -40414533 - FLAM_C SINE Alu -22 121 1 1511 207 186 2 chr20 31739351 31739829 -40414053 - L1ME3A LINE L1 0 6170 5605 1354 169 143 7 chr20 31739869 31740141 -40413741 + AluJb SINE Alu 1 309 -3 662 59 0 0 chr20 31740221 31740306 -40413576 + AluSp/q SINE Alu 214 298 -15 387 0 0 0 chr20 31740307 31740350 -40413532 + (TA)n Simple_repeat Simple_repeat 1 43 0 762 245 62 51 chr20 31740370 31740839 -40413043 - L1MDa LINE L1 -4988 1542 1069 230 300 170 0 chr20 31741183 31741283 -40412599 + L2 LINE L2 2637 2753 -561 1502 135 139 11 chr20 31741389 31741655 -40412227 + AluJo SINE Alu 1 300 -12 830 182 0 0 chr20 31741829 31741961 -40411921 - FLAM_A SINE Alu -1 132 1 215 280 38 32 chr20 31744027 31744184 -40409698 + (CAGGG)n Simple_repeat Simple_repeat 3 160 0 237 298 11 11 chr20 31744818 31744912 -40408970 + MER46C DNA MER2_type 112 205 -133 868 178 0 7 chr20 31745690 31745842 -40408040 - AluJo SINE Alu -153 159 9 2036 131 0 0 chr20 31745867 31746157 -40407725 - AluSx SINE Alu -22 290 1 228 283 48 99 chr20 31746168 31746353 -40407529 - L1MC4 LINE L1 -1 8041 7883 1811 173 13 0 chr20 31746353 31746659 -40407223 + AluJb SINE Alu 1 310 -2 228 283 48 99 chr20 31746659 31746847 -40407035 - L1MC4 LINE L1 -159 7883 7687 499 276 51 15 chr20 31746929 31747125 -40406757 - MLT1G LTR MaLR -39 551 349 263 241 25 0 chr20 31747285 31747364 -40406518 - MLT1G1 LTR MaLR -504 91 11 277 379 53 5 chr20 31747387 31747593 -40406289 - L1MC5 LINE L1 -451 7510 7295 295 248 120 23 chr20 31747772 31747905 -40405977 + L1MC4 LINE L1 7480 7625 -417 244 122 61 0 chr20 31748169 31748218 -40405664 + L1MC4 LINE L1 7991 8042 0 2096 113 0 0 chr20 31748218 31748540 -40405342 - AluSx SINE Alu 0 322 1 27 0 0 0 chr20 31749360 31749387 -40404495 + AT_rich Low_complexity Low_complexity 1 27 0 350 300 0 0 chr20 31749577 31749667 -40404215 - MER20 DNA MER1_type -128 91 2 1650 160 7 7 chr20 31749720 31750001 -40403881 + AluJo SINE Alu 1 281 -31 252 0 0 0 chr20 31750004 31750032 -40403850 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 292 359 136 17 chr20 31750485 31750780 -40403102 + L1ME LINE L1 5525 5854 -267 295 254 173 50 chr20 31754419 31754679 -40399203 - L2 LINE L2 -205 3108 2817 700 263 37 5 chr20 31754695 31754885 -40398997 + MIR SINE MIR 35 230 -32 2077 103 4 4 chr20 31755326 31755631 -40398251 - AluSc SINE Alu 0 305 1 2130 128 0 3 chr20 31755721 31756026 -40397856 - AluSx SINE Alu -8 304 1 2140 122 3 3 chr20 31756097 31756409 -40397473 - AluSx SINE Alu 0 312 1 1310 99 0 0 chr20 31756409 31756581 -40397301 - AluSc SINE Alu -6 303 132 2088 74 64 11 chr20 31756581 31756864 -40397018 - AluSx SINE Alu -14 298 1 258 316 194 19 chr20 31757580 31757786 -40396096 - L2 LINE L2 -378 2936 2695 2248 70 0 20 chr20 31758604 31758906 -40394976 - AluY SINE Alu -15 296 1 22 35 0 0 chr20 31759990 31760019 -40393863 + AT_rich Low_complexity Low_complexity 1 29 0 356 339 55 66 chr20 31760199 31760488 -40393394 + L1M4 LINE L1 4457 4742 -1404 290 128 0 0 chr20 31760506 31760553 -40393329 + L1ME2 LINE L1 6069 6115 -49 1359 208 70 88 chr20 31760607 31760805 -40393077 + L1M4 LINE L1 2604 2804 -3342 2493 53 0 0 chr20 31760805 31761109 -40392773 + L1PA5 LINE L1 5851 6154 0 1359 208 70 88 chr20 31761109 31761469 -40392413 + L1M4 LINE L1 2804 3152 -2994 250 254 32 103 chr20 31761519 31761645 -40392237 + MER58B DNA MER1_type 179 295 -46 636 227 110 66 chr20 31761670 31761869 -40392013 + L1M4 LINE L1 3153 3342 -2804 1641 109 109 0 chr20 31761869 31762134 -40391748 - AluJo SINE Alu -18 294 1 636 227 110 66 chr20 31762134 31762344 -40391538 + L1M4 LINE L1 3342 3580 -2566 3124 178 111 77 chr20 31762356 31763214 -40390668 + MER21A LTR ERV1 9 895 -36 3432 189 69 140 chr20 31763273 31763554 -40390328 + L1M4 LINE L1 3689 3988 -2158 2183 122 42 11 chr20 31763554 31763907 -40389975 - THE1B LTR MaLR 0 364 1 3432 189 69 140 chr20 31763907 31764535 -40389347 + L1M4 LINE L1 3988 4659 -1487 1727 165 3 3 chr20 31764535 31764826 -40389056 - AluJb SINE Alu -21 291 1 3432 189 69 140 chr20 31764826 31764914 -40388968 + L1M4 LINE L1 4659 4752 -1394 731 137 8 0 chr20 31764914 31765031 -40388851 + AluJb SINE Alu 14 131 -181 3432 189 69 140 chr20 31765031 31765339 -40388543 + L1M4 LINE L1 4752 5080 -1066 1976 136 14 0 chr20 31765339 31765633 -40388249 + AluSx SINE Alu 1 298 -14 183 42 0 0 chr20 31765637 31765661 -40388221 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3432 189 69 140 chr20 31765661 31765851 -40388031 + L1M4 LINE L1 5083 5193 -953 836 166 14 0 chr20 31766341 31766480 -40387402 + FLAM_C SINE Alu 2 142 -1 1908 98 45 21 chr20 31766892 31767030 -40386852 + AluSp SINE Alu 1 134 -179 2316 68 0 3 chr20 31767030 31767326 -40386556 + AluY SINE Alu 3 297 -14 1908 98 45 21 chr20 31767326 31767474 -40386408 + AluSp SINE Alu 134 294 -19 2144 93 0 10 chr20 31768362 31768653 -40385229 + AluSg SINE Alu 1 288 -22 357 24 0 0 chr20 31768655 31768697 -40385185 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2200 104 0 10 chr20 31768893 31769202 -40384680 + AluSq SINE Alu 1 306 -7 1870 130 10 3 chr20 31769769 31770087 -40383795 + AluSx SINE Alu 1 320 0 653 191 0 17 chr20 31770160 31770275 -40383607 + FLAM_C SINE Alu 6 118 -25 432 130 0 0 chr20 31770285 31770354 -40383528 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 2225 119 0 0 chr20 31771834 31772146 -40381736 - AluSx SINE Alu 0 312 1 784 218 112 79 chr20 31772169 31772384 -40381498 - L1MC5 LINE L1 -32 7929 7723 1503 125 125 8 chr20 31772384 31772640 -40381242 + AluSg1 SINE Alu 11 296 -13 784 218 112 79 chr20 31772640 31772665 -40381217 - L1MC5 LINE L1 -238 7723 7700 2078 102 14 7 chr20 31772665 31772960 -40380922 - AluSx SINE Alu -15 297 1 784 218 112 79 chr20 31772960 31773200 -40380682 - L1MC5 LINE L1 -261 7700 7432 509 169 0 0 chr20 31773201 31773278 -40380604 - AluJ/FLAM SINE Alu -229 83 7 742 223 58 107 chr20 31773285 31773764 -40380118 - L1MC5 LINE L1 -526 7435 6980 1279 182 0 0 chr20 31773801 31774032 -40379850 + AluJb SINE Alu 1 231 -81 452 165 0 0 chr20 31774077 31774162 -40379720 + AluS SINE Alu 221 305 -4 1047 278 42 19 chr20 31774176 31774536 -40379346 - L1MC4 LINE L1 -974 7068 6701 2302 90 0 0 chr20 31774537 31774838 -40379044 - AluSq SINE Alu -12 301 1 7157 151 81 11 chr20 31775053 31776422 -40377460 + L1M4c LINE L1 22 1486 -4898 1039 206 101 66 chr20 31776422 31776556 -40377326 + AluJb SINE Alu 1 129 -173 2195 78 10 32 chr20 31776556 31776864 -40377018 + AluY SINE Alu 1 301 -10 1039 206 101 66 chr20 31776864 31777015 -40376867 + AluJb SINE Alu 129 296 -6 244 225 62 25 chr20 31777246 31777326 -40376556 + HAL1 LINE L1 2338 2420 -87 1541 157 25 7 chr20 31777380 31777666 -40376216 - AluJb SINE Alu -21 291 1 212 374 0 17 chr20 31778994 31779173 -40374709 + (CAGGG)n Simple_repeat Simple_repeat 1 176 0 577 239 122 61 chr20 31781435 31781648 -40372234 + MIR SINE MIR 27 252 -10 291 231 39 39 chr20 31782040 31782170 -40371712 + L1MC4a LINE L1 7028 7157 -651 758 247 117 0 chr20 31782644 31782891 -40370991 + L1M4c LINE L1 1192 1467 -4917 545 146 45 0 chr20 31782893 31782982 -40370900 + MER41A LTR ERV1 373 465 -89 459 0 0 0 chr20 31782982 31783033 -40370849 + (A)n Simple_repeat Simple_repeat 1 51 0 2124 110 0 28 chr20 31783035 31783354 -40370528 + AluSx SINE Alu 3 312 0 469 158 29 164 chr20 31783381 31783552 -40370330 + L1 LINE L1 4181 4328 -1818 1075 180 0 5 chr20 31783552 31783746 -40370136 + AluJo SINE Alu 1 193 -119 2058 165 112 31 chr20 31783746 31784194 -40369688 + MER51A LTR ERV1 1 484 -150 400 48 0 3 chr20 31784194 31784253 -40369629 - AluY SINE Alu -253 47 1 437 196 10 21 chr20 31784286 31784383 -40369499 - L1M4 LINE L1 -1367 4779 4684 2298 165 74 25 chr20 31785263 31785735 -40368147 - LTR34 LTR ERV1 0 699 205 2895 124 97 21 chr20 31785735 31786253 -40367629 + MER4D LTR ERV1 1 557 -346 424 100 0 0 chr20 31786255 31786325 -40367557 - Alu SINE Alu -1 311 242 710 214 37 37 chr20 31786325 31786512 -40367370 + MER4D LTR ERV1 717 903 0 320 267 69 35 chr20 31786970 31787086 -40366796 + L1MC/D LINE L1 5344 5463 -2345 418 199 106 20 chr20 31787101 31787318 -40366564 - MLT1B LTR MaLR -15 375 116 557 242 73 105 chr20 31787318 31787566 -40366316 + MER21B LTR ERV1 1 240 -623 1345 236 65 8 chr20 31787571 31787939 -40365943 + MER21B LTR ERV1 421 809 -54 764 139 9 0 chr20 31787970 31788085 -40365797 - MLT1B LTR MaLR -274 116 1 303 319 53 0 chr20 31788091 31788185 -40365697 + L1MC/D LINE L1 5489 5587 -2221 544 227 24 0 chr20 31788185 31788325 -40365557 + L1M4 LINE L1 5330 5472 -692 260 213 96 57 chr20 31788461 31788592 -40365290 + MIR3 SINE MIR 63 201 -7 275 204 44 66 chr20 31789323 31789504 -40364378 + (CCCCAG)n Simple_repeat Simple_repeat 2 178 0 231 208 33 71 chr20 31789553 31789736 -40364146 + (CCCCAG)n Simple_repeat Simple_repeat 1 176 0 1459 176 23 23 chr20 31790392 31790627 -40363255 + AluJb SINE Alu 10 247 -65 4721 164 15 37 chr20 31790627 31791618 -40362264 - LTR5 LTR ERVK 0 969 1 1459 176 23 23 chr20 31791618 31791683 -40362199 + AluJb SINE Alu 246 310 -2 1559 251 84 50 chr20 31791748 31792322 -40361560 - LTR34 LTR ERV1 -3 696 104 251 237 105 13 chr20 31792347 31792423 -40361459 - MER4C LTR ERV1 -354 111 29 698 181 0 31 chr20 31792537 31792664 -40361218 + FLAM_A SINE Alu 1 123 -10 821 194 13 0 chr20 31793389 31793544 -40360338 - FRAM SINE Alu -12 164 8 1460 158 0 74 chr20 31794787 31795084 -40358798 + AluJo SINE Alu 1 275 -37 207 0 0 0 chr20 31795091 31795114 -40358768 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 258 231 0 0 chr20 31795629 31795681 -40358201 - L1ME LINE L1 -526 5595 5544 246 286 0 24 chr20 31795773 31795857 -40358025 - L1ME3 LINE L1 -29 6133 6052 805 134 0 8 chr20 31795868 31795987 -40357895 + FLAM_C SINE Alu 1 118 -15 1947 105 0 0 chr20 31795993 31796259 -40357623 - AluSx SINE Alu -46 266 1 1614 189 0 10 chr20 31796283 31796585 -40357297 + AluJo SINE Alu 1 299 -13 1753 174 0 3 chr20 31796630 31796917 -40356965 + AluJb SINE Alu 5 290 -22 790 191 66 7 chr20 31796930 31797082 -40356800 + AluJb SINE Alu 123 283 -29 449 263 0 25 chr20 31797111 31797229 -40356653 + L1ME LINE L1 34 148 -5922 675 169 156 19 chr20 31797278 31797438 -40356444 + L1MB8 LINE L1 5992 6173 -5 658 196 78 87 chr20 31797466 31797533 -40356349 + L1ME LINE L1 2230 2296 -3784 1916 163 0 0 chr20 31797533 31797840 -40356042 + AluSx SINE Alu 1 307 -5 658 196 78 87 chr20 31797840 31798104 -40355778 + L1ME LINE L1 2296 2558 -3522 1883 141 0 38 chr20 31798131 31798451 -40355431 + AluSx SINE Alu 1 308 -4 1657 130 38 4 chr20 31798482 31798770 -40355112 - AluSx SINE Alu 0 310 14 21 0 0 0 chr20 31798783 31798804 -40355078 + AT_rich Low_complexity Low_complexity 1 21 0 2233 95 0 0 chr20 31799528 31799823 -40354059 - AluSc SINE Alu -14 295 1 1593 178 0 20 chr20 31799888 31800191 -40353691 - AluJo SINE Alu -15 297 1 1355 183 10 63 chr20 31800233 31800533 -40353349 - AluJo SINE Alu -28 284 1 1229 223 102 105 chr20 31801125 31801301 -40352581 + L1MDa LINE L1 1895 2070 -4470 6450 68 33 25 chr20 31801301 31803075 -40350807 + SVA Other Other 2 1385 -1 1229 223 102 105 chr20 31803075 31803170 -40350712 + L1MDa LINE L1 2070 2164 -4376 2241 74 3 0 chr20 31803170 31803454 -40350428 + AluY SINE Alu 1 285 -26 1229 223 102 105 chr20 31803454 31804175 -40349707 + L1MDa LINE L1 2164 2888 -3652 922 154 31 72 chr20 31804221 31804416 -40349466 + AluJo SINE Alu 1 187 -125 2122 114 0 25 chr20 31804422 31804606 -40349276 - AluSx SINE Alu 0 312 138 2033 132 0 0 chr20 31804606 31804902 -40348980 - AluSq SINE Alu -17 296 1 2122 114 0 25 chr20 31804902 31805032 -40348850 - AluSx SINE Alu -174 138 6 1168 220 67 113 chr20 31805033 31805574 -40348308 + L1MCa LINE L1 167 682 -5882 226 227 27 0 chr20 31805650 31805725 -40348157 + GA-rich Low_complexity Low_complexity 1 77 0 834 162 42 0 chr20 31805735 31805877 -40348005 + L1MCa LINE L1 564 711 -5334 2393 222 28 10 chr20 31805904 31806403 -40347479 + MLT2B3 LTR ERVL 1 508 -46 1912 198 20 11 chr20 31806476 31806920 -40346962 + L1MCa LINE L1 747 1194 -4851 866 215 6 0 chr20 31806933 31807105 -40346777 + FRAM SINE Alu 2 174 -2 1405 164 119 74 chr20 31807106 31807156 -40346726 + L1MCa LINE L1 1167 1213 -5351 1340 160 197 0 chr20 31807156 31807400 -40346482 + AluJo SINE Alu 1 292 -10 1405 164 119 74 chr20 31807400 31807770 -40346112 + L1MCa LINE L1 1213 1606 -4958 522 166 113 0 chr20 31807795 31807946 -40345936 + L1MCa LINE L1 1541 1708 -4856 * 1834 191 43 27 chr20 31807945 31808499 -40345383 + L1MCa LINE L1 3134 3696 -2868 351 302 44 63 chr20 31808625 31808686 -40345196 + L1MCa LINE L1 3757 3818 -2746 1641 168 3 13 chr20 31808686 31808995 -40344887 - AluJb SINE Alu -6 306 1 351 302 44 63 chr20 31808995 31809092 -40344790 + L1MCa LINE L1 3818 3912 -2652 794 129 0 40 chr20 31809093 31809217 -40344665 + FLAM_C SINE Alu 5 123 -20 2013 122 14 7 chr20 31809233 31809529 -40344353 + AluSx SINE Alu 2 299 -13 26 30 0 0 chr20 31809529 31809562 -40344320 + AT_rich Low_complexity Low_complexity 1 33 0 1776 127 24 14 chr20 31810187 31810478 -40343404 + AluSg SINE Alu 1 294 -16 2489 149 42 2 chr20 31810514 31810924 -40342958 + MSTA LTR MaLR 3 428 0 2118 100 27 7 chr20 31810979 31811279 -40342603 - AluSx SINE Alu -6 306 1 2054 133 3 3 chr20 31811870 31812178 -40341704 + AluSx SINE Alu 1 308 -4 666 205 157 6 chr20 31812724 31812890 -40340992 - MIR SINE MIR -1 261 71 2314 93 0 0 chr20 31813299 31813610 -40340272 + AluSq SINE Alu 1 311 -2 201 309 29 0 chr20 31814446 31814514 -40339368 - L3 LINE CR1 -5 1572 1503 249 263 111 76 chr20 31815173 31815344 -40338538 - MER104 DNA Tc2 -3 177 1 930 230 133 112 chr20 31815404 31815451 -40338431 - L1MC4 LINE L1 0 8042 7997 2466 56 3 0 chr20 31815451 31815753 -40338129 + AluY SINE Alu 1 303 -8 2029 105 23 7 chr20 31815755 31816060 -40337822 + AluSg SINE Alu 1 310 0 930 230 133 112 chr20 31816060 31816696 -40337186 - L1MC4 LINE L1 -45 7997 7342 1639 172 7 13 chr20 31816739 31817041 -40336841 - AluJb SINE Alu -7 305 6 2158 102 3 0 chr20 31818105 31818400 -40335482 - AluSp SINE Alu -1 312 17 1939 130 10 0 chr20 31818400 31818692 -40335190 - AluSx SINE Alu -17 295 1 2300 73 3 3 chr20 31818796 31819097 -40334785 + AluY SINE Alu 1 301 -10 216 0 0 0 chr20 31819127 31819151 -40334731 + (TTAAA)n Simple_repeat Simple_repeat 3 26 0 731 159 16 0 chr20 31819159 31819285 -40334597 + FLAM_A SINE Alu 14 141 -1 386 328 35 29 chr20 31819518 31819689 -40334193 + MIR SINE MIR 81 252 -10 254 253 27 13 chr20 31820098 31820173 -40333709 + MLT1K LTR MaLR 513 588 0 2065 114 0 3 chr20 31820335 31820633 -40333249 + AluSx SINE Alu 1 297 -15 204 209 47 0 chr20 31820695 31820738 -40333144 - MER5A DNA MER1_type -1 188 144 1998 116 7 23 chr20 31821443 31821745 -40332137 + AluSx SINE Alu 1 297 -15 2068 89 4 0 chr20 31822260 31822570 -40331312 + AluSc SINE Alu 1 311 0 708 142 63 16 chr20 31822646 31822773 -40331109 + AluJb SINE Alu 2 134 -178 7105 54 5 17 chr20 31823116 31824451 -40329431 + L1PA8 LINE L1 4841 6172 0 2013 65 50 11 chr20 31824473 31824790 -40329092 + AluSq SINE Alu 1 328 0 780 106 0 0 chr20 31826211 31826315 -40327567 + MER46A DNA MER2_type 1 104 -132 1628 138 16 41 chr20 31826316 31826636 -40327246 - AluJb SINE Alu 0 312 1 857 124 0 0 chr20 31826636 31826765 -40327117 - AluJb SINE Alu -183 129 1 797 124 108 0 chr20 31826765 31826894 -40326988 + MER46A DNA MER2_type 94 236 0 359 170 132 107 chr20 31826897 31827015 -40326867 - L2 LINE L2 -17 3296 3182 2070 106 27 0 chr20 31827015 31827307 -40326575 + AluSx SINE Alu 1 300 -12 1809 145 0 7 chr20 31827315 31827618 -40326264 + AluSx SINE Alu 1 301 -11 359 170 132 107 chr20 31827618 31827649 -40326233 - L2 LINE L2 -137 3176 3134 371 200 106 111 chr20 31828162 31828309 -40325573 + MIR SINE MIR 22 169 -93 1643 176 24 0 chr20 31828309 31828604 -40325278 - AluJb SINE Alu -8 304 3 371 200 106 111 chr20 31828604 31828636 -40325246 + MIR SINE MIR 169 200 -62 226 250 0 0 chr20 31828699 31828747 -40325135 - MER5B DNA MER1_type -49 129 82 2799 139 65 45 chr20 31828763 31829094 -40324788 - MER21A LTR ERV1 -34 897 551 2074 121 0 3 chr20 31829094 31829400 -40324482 - AluSx SINE Alu -7 305 1 2799 139 65 45 chr20 31829400 31829580 -40324302 - MER21A LTR ERV1 -380 551 376 770 155 263 24 chr20 31829585 31829653 -40324229 - MER21A LTR ERV1 -667 264 214 2101 105 0 10 chr20 31829653 31829957 -40323925 + AluSc SINE Alu 1 301 -8 770 155 263 24 chr20 31829957 31830101 -40323781 - MER21A LTR ERV1 -717 214 1 313 240 94 0 chr20 31830102 31830198 -40323684 + L2 LINE L2 2434 2538 -776 1695 121 7 15 chr20 31830216 31830489 -40323393 + AluSq SINE Alu 41 311 -2 407 266 0 0 chr20 31830489 31830602 -40323280 - L1MD3 LINE L1 -12 7983 7871 536 180 193 7 chr20 31830628 31830778 -40323104 - L1ME3A LINE L1 -10 6160 5983 4006 56 48 0 chr20 31831416 31831917 -40321965 - LTR17 LTR ERV1 0 780 256 523 167 61 68 chr20 31831942 31832074 -40321808 - L1MD3 LINE L1 -107 7873 7571 935 164 0 68 chr20 31832335 31832512 -40321370 + FRAM SINE Alu 1 165 -1 2076 112 7 0 chr20 31833374 31833669 -40320213 + AluSp SINE Alu 2 298 -15 1483 184 0 4 chr20 31833680 31833947 -40319935 + AluJb SINE Alu 1 266 -46 2326 86 3 0 chr20 31834659 31834961 -40318921 - AluSp SINE Alu -10 303 1 1781 128 77 0 chr20 31835385 31835659 -40318223 - AluSx SINE Alu -17 295 1 4219 213 161 102 chr20 31835704 31836230 -40317652 - L1MC3 LINE L1 -8 7777 7284 456 218 9 55 chr20 31836230 31836245 -40317637 - MLT1F1 LTR MaLR -428 139 125 1858 138 3 0 chr20 31836245 31836542 -40317340 - AluJb SINE Alu -14 298 1 456 218 9 55 chr20 31836542 31836636 -40317246 - MLT1F1 LTR MaLR -442 125 35 4219 213 161 102 chr20 31836636 31837300 -40316582 - L1MC3 LINE L1 -501 7284 6661 1812 161 3 3 chr20 31837300 31837598 -40316284 - AluJb SINE Alu -14 298 1 4219 213 161 102 chr20 31837598 31837967 -40315915 - L1MC3 LINE L1 -1124 6661 6316 2466 101 8 8 chr20 31837967 31838322 -40315560 + THE1A LTR MaLR 1 355 0 4219 213 161 102 chr20 31838322 31838465 -40315417 - L1MC3 LINE L1 -1469 6316 6183 2173 114 0 0 chr20 31838465 31838771 -40315111 - AluSc SINE Alu -3 306 1 4219 213 161 102 chr20 31838771 31838875 -40315007 - L1MC3 LINE L1 -1602 6183 6087 1624 173 3 19 chr20 31838875 31839182 -40314700 + AluJo SINE Alu 1 302 -10 4219 213 161 102 chr20 31839182 31839449 -40314433 - L1MC3 LINE L1 -1698 6087 5460 2258 111 0 0 chr20 31839776 31840083 -40313799 + AluSx SINE Alu 1 307 -5 291 202 141 30 chr20 31840353 31840452 -40313430 + L2 LINE L2 3197 3306 -7 1609 182 38 54 chr20 31840498 31840889 -40312993 - MLT1B LTR MaLR 0 390 6 534 160 29 11 chr20 31841480 31841655 -40312227 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 435 234 0 62 chr20 31841901 31842093 -40311789 + (CA)n Simple_repeat Simple_repeat 1 180 0 779 189 0 0 chr20 31843944 31844076 -40309806 + FLAM_C SINE Alu 2 133 0 1761 137 17 14 chr20 31844609 31844901 -40308981 - AluSx SINE Alu -14 298 6 2060 104 3 16 chr20 31845236 31845544 -40308338 + AluSx SINE Alu 1 304 -8 21 36 0 0 chr20 31845749 31845777 -40308105 + AT_rich Low_complexity Low_complexity 1 28 0 2177 87 35 0 chr20 31846080 31846369 -40307513 + AluSc SINE Alu 1 299 -10 1581 183 3 20 chr20 31846380 31846686 -40307196 + AluJb SINE Alu 1 301 -11 589 152 18 91 chr20 31847057 31847239 -40306643 + MLT1G1 LTR MaLR 234 389 -206 261 233 14 27 chr20 31847212 31847285 -40306597 + MLT1G1 LTR MaLR 331 402 -153 * 318 150 12 50 chr20 31847273 31847353 -40306529 + MLT1G1 LTR MaLR 519 595 0 882 125 0 22 chr20 31847373 31847509 -40306373 - FLAM_C SINE Alu 0 133 1 1873 141 20 3 chr20 31847700 31847999 -40305883 + AluJb SINE Alu 1 304 -8 26 30 0 0 chr20 31848339 31848372 -40305510 + AT_rich Low_complexity Low_complexity 1 33 0 299 224 45 15 chr20 31848390 31848457 -40305425 - L2 LINE L2 -5 3308 3240 492 305 24 24 chr20 31848463 31848630 -40305252 - L2 LINE L2 -881 2433 2267 497 164 0 0 chr20 31848809 31848882 -40305000 - AluJ/FLAM SINE Alu -239 73 1 2004 133 0 0 chr20 31848912 31849205 -40304677 + AluSx SINE Alu 1 293 -19 1556 160 0 62 chr20 31849221 31849528 -40304354 - AluJo SINE Alu -24 288 1 1894 288 97 17 chr20 31850141 31850978 -40302904 + HAL1 LINE L1 2 905 -1602 2273 81 0 3 chr20 31851130 31851427 -40302455 + AluSc SINE Alu 1 296 -13 279 0 0 0 chr20 31851503 31851534 -40302348 + (TA)n Simple_repeat Simple_repeat 1 31 0 1414 123 26 0 chr20 31851554 31851781 -40302101 - AluSx SINE Alu -20 292 60 1708 174 0 13 chr20 31851796 31852100 -40301782 + AluJo SINE Alu 1 300 -12 1451 215 169 51 chr20 31852102 31852787 -40301095 + HAL1 LINE L1 1059 1824 -683 824 152 0 36 chr20 31853015 31853153 -40300729 + FLAM_C SINE Alu 2 134 -9 233 163 20 0 chr20 31853409 31853458 -40300424 + (TA)n Simple_repeat Simple_repeat 1 50 0 1619 170 24 7 chr20 31854990 31855278 -40298604 + AluJb SINE Alu 1 293 -19 868 145 8 0 chr20 31857189 31857320 -40296562 + FLAM_C SINE Alu 1 132 -1 1938 139 3 0 chr20 31857501 31857795 -40296087 - AluSx SINE Alu -17 295 1 2007 129 0 0 chr20 31857806 31858101 -40295781 - AluSx SINE Alu -17 295 1 216 320 127 36 chr20 31858562 31858785 -40295097 - L2 LINE L2 -236 3036 2798 772 301 111 23 chr20 31858830 31859225 -40294657 + LTR16C LTR ERVL 55 484 -7 1423 170 47 37 chr20 31859406 31859706 -40294176 - AluJo SINE Alu -9 303 1 2439 162 35 28 chr20 31860900 31861357 -40292525 + LTR32 LTR ERVL 12 471 0 275 295 244 14 chr20 31861428 31861645 -40292237 + L2 LINE L2 2974 3240 -73 2432 42 3 0 chr20 31861851 31862137 -40291745 - AluY SINE Alu -24 287 1 235 331 110 49 chr20 31862367 31862530 -40291352 - L2 LINE L2 -546 2768 2596 267 295 101 16 chr20 31862660 31862789 -40291093 - MIR SINE MIR -102 160 21 235 325 86 52 chr20 31862951 31863299 -40290583 - L2 LINE L2 -1339 1975 1616 988 216 78 51 chr20 31865188 31865230 -40288652 + MER58B DNA MER1_type 37 76 -2344 2325 82 0 25 chr20 31865230 31865548 -40288334 - AluSg SINE Alu 0 310 1 988 216 78 51 chr20 31865548 31865801 -40288081 + MER58B DNA MER1_type 76 340 -1 2307 113 18 0 chr20 31866378 31866706 -40287176 + HERVK22 LTR ERVK 574 907 -6336 2109 169 0 0 chr20 31866696 31867033 -40286849 + HERVK22 LTR ERVK 282 618 -6219 * 2219 169 19 24 chr20 31867067 31867480 -40286402 - LTR3 LTR ERVK -16 416 6 2091 128 3 0 chr20 31867552 31867841 -40286041 - AluSq SINE Alu -23 290 1 180 0 0 0 chr20 31867847 31867867 -40286015 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1824 129 65 0 chr20 31867867 31868130 -40285752 - AluSx SINE Alu -32 280 1 695 156 0 33 chr20 31868133 31868255 -40285627 - AluJb SINE Alu -9 303 186 1097 159 95 95 chr20 31868292 31868618 -40285264 - THE1C LTR MaLR -49 326 1 502 292 129 54 chr20 31868618 31868991 -40284891 - MLT1J2 LTR MaLR -3 447 47 7658 50 2 5 chr20 31870736 31871883 -40281999 - L1PA6 LINE L1 0 6154 5010 1761 181 7 0 chr20 31872068 31872360 -40281522 + AluJo SINE Alu 10 303 -9 1451 225 73 60 chr20 31872667 31872956 -40280926 + L2 LINE L2 1722 2023 -1291 2061 144 0 22 chr20 31872956 31873275 -40280607 - AluSx SINE Alu 0 312 1 1451 225 73 60 chr20 31873275 31873506 -40280376 + L2 LINE L2 2023 2249 -1065 796 252 154 66 chr20 31873550 31873990 -40279892 + L1MB4 LINE L1 5362 5840 -340 2074 141 0 0 chr20 31874313 31874612 -40279270 - AluSx SINE Alu -13 299 1 2429 178 64 2 chr20 31874974 31875000 -40278882 - L1 LINE L1 -836 5310 5287 1869 131 4 4 chr20 31875000 31875268 -40278614 - AluSx SINE Alu -44 268 1 2429 178 64 2 chr20 31875268 31875741 -40278141 - L1 LINE L1 -859 5287 4780 1804 152 3 33 chr20 31875741 31875877 -40278005 - MER4A LTR ERV1 0 664 525 2095 108 4 0 chr20 31875877 31876179 -40277703 - AluSg1 SINE Alu 0 303 1 1804 152 3 33 chr20 31876179 31876396 -40277486 - MER4A LTR ERV1 -139 525 262 582 163 0 10 chr20 31876398 31876496 -40277386 - MER4A LTR ERV1 -567 97 1 17078 108 45 10 chr20 31876504 31879171 -40274711 - MER4A-int LTR ERV1 -2 6596 3837 8972 112 158 128 chr20 31879170 31879528 -40274354 - MER4A-int LTR ERV1 -2917 3681 3335 * 2062 129 7 20 chr20 31879528 31879830 -40274052 - AluSx SINE Alu -14 298 1 8972 112 158 128 chr20 31879830 31879935 -40273947 - MER4A-int LTR ERV1 -3263 3335 3235 477 0 0 0 chr20 31879941 31879994 -40273888 + (TA)n Simple_repeat Simple_repeat 2 54 0 2381 76 3 3 chr20 31879994 31880289 -40273593 - AluSc SINE Alu -11 298 1 8972 112 158 128 chr20 31880289 31882090 -40271792 - MER4A-int LTR ERV1 -3363 3235 1489 2434 94 3 0 chr20 31882090 31882399 -40271483 - AluSx SINE Alu -2 310 1 1723 109 0 83 chr20 31882399 31882675 -40271207 - AluSx SINE Alu -59 253 1 8972 112 158 128 chr20 31882675 31882874 -40271008 - MER4A-int LTR ERV1 -5109 1489 1297 252 0 0 0 chr20 31882874 31882902 -40270980 + (CA)n Simple_repeat Simple_repeat 2 29 0 8972 112 158 128 chr20 31882902 31883045 -40270837 - MER4A-int LTR ERV1 -5301 1297 993 253 156 0 44 chr20 31883065 31883110 -40270772 - LTR49 LTR ERV1 -282 313 271 332 127 0 70 chr20 31883110 31883181 -40270701 - MER4A-int LTR ERV1 -5845 753 688 378 0 0 0 chr20 31883188 31883230 -40270652 + (TG)n Simple_repeat Simple_repeat 1 42 0 2379 137 53 25 chr20 31883230 31883875 -40270007 - MER4A-int LTR ERV1 -5792 806 1 1896 99 6 73 chr20 31883878 31883969 -40269913 - MER4A LTR ERV1 0 664 568 1607 266 43 68 chr20 31883969 31884597 -40269285 - LTR9 LTR ERV1 0 612 1 1896 99 6 73 chr20 31884597 31884819 -40269063 - MER4A LTR ERV1 -96 568 372 348 115 19 0 chr20 31884819 31884871 -40269011 - MER4A LTR ERV1 -351 313 261 671 110 0 20 chr20 31884871 31884971 -40268911 - MER4A LTR ERV1 -566 98 1 4789 190 26 97 chr20 31884971 31885391 -40268491 - L1 LINE L1 -807 5339 4891 2300 88 3 25 chr20 31885391 31885708 -40268174 - AluSp SINE Alu -3 310 1 4789 190 26 97 chr20 31885708 31885794 -40268088 - L1 LINE L1 -1255 4891 4800 1861 139 4 0 chr20 31885794 31886061 -40267821 - AluJo SINE Alu -16 296 29 4789 190 26 97 chr20 31886061 31886809 -40267073 - L1 LINE L1 -1346 4800 4000 2384 91 0 0 chr20 31886809 31887105 -40266777 - AluSg SINE Alu -14 296 1 4789 190 26 97 chr20 31887105 31887406 -40266476 - L1 LINE L1 -2146 4000 4019 2067 130 20 0 chr20 31887406 31887698 -40266184 - AluSx SINE Alu -14 298 1 4789 190 26 97 chr20 31887698 31887822 -40266060 - L1 LINE L1 -2126 4020 3889 2354 96 0 16 chr20 31888635 31888938 -40264944 - AluSp SINE Alu -15 298 1 321 276 82 22 chr20 31889022 31889156 -40264726 - MIR SINE MIR -101 161 20 3249 191 29 34 chr20 31889266 31890040 -40263842 - L1MA4 LINE L1 0 6171 5352 227 160 0 20 chr20 31890062 31890112 -40263770 - L1MA4 LINE L1 -932 5373 5325 853 199 0 13 chr20 31890114 31890270 -40263612 - FRAM SINE Alu 0 176 23 11195 174 33 54 chr20 31890270 31891000 -40262882 - L1 LINE L1 -1015 6550 5806 2038 103 0 60 chr20 31891000 31891301 -40262581 - AluSc SINE Alu -26 283 1 11195 174 33 54 chr20 31891301 31891379 -40262503 - L1 LINE L1 -1759 5806 5728 2303 112 3 6 chr20 31891379 31891693 -40262189 - AluSp SINE Alu 0 313 1 11195 174 33 54 chr20 31891693 31892719 -40261163 - L1 LINE L1 -1837 5728 4682 4897 139 19 65 chr20 31892719 31893431 -40260451 - LTR25 LTR ERV1 0 794 124 2314 80 0 3 chr20 31893431 31893718 -40260164 - AluSc SINE Alu -15 294 9 4897 139 19 65 chr20 31893718 31893837 -40260045 - LTR25 LTR ERV1 -670 124 1 11195 174 33 54 chr20 31893837 31893973 -40259909 - L1 LINE L1 -2883 4682 4545 1824 154 34 0 chr20 31893973 31894266 -40259616 + AluJb SINE Alu 1 303 -9 11195 174 33 54 chr20 31894266 31894554 -40259328 - L1 LINE L1 -3020 4545 4253 1661 188 3 16 chr20 31894554 31894857 -40259025 + AluJb SINE Alu 1 299 -13 1537 226 49 7 chr20 31894861 31895166 -40258716 - 7SLRNA srpRNA srpRNA -2 318 1 11195 174 33 54 chr20 31895166 31895462 -40258420 - L1 LINE L1 -3315 4250 3949 2113 88 57 27 chr20 31895462 31895758 -40258124 - AluSx SINE Alu -7 305 1 11195 174 33 54 chr20 31895758 31895968 -40257914 - L1 LINE L1 -3616 3949 3736 2326 78 0 0 chr20 31895968 31896277 -40257605 - AluY SINE Alu 0 309 1 11195 174 33 54 chr20 31896277 31896909 -40256973 - L1 LINE L1 -3829 3736 3214 1684 175 17 3 chr20 31896910 31897202 -40256680 - AluSq SINE Alu -17 296 1 2140 216 44 4 chr20 31897233 31897755 -40256127 - L1 LINE L1 -4528 3037 2495 1507 165 79 10 chr20 31897758 31898049 -40255833 - AluJb SINE Alu -1 311 1 4453 196 62 3 chr20 31898049 31898935 -40254947 - L1 LINE L1 -4362 2203 1266 1115 179 36 0 chr20 31899491 31899686 -40254196 + AluJo SINE Alu 1 202 -110 297 154 0 0 chr20 31899690 31899742 -40254140 + FAM SINE Alu 128 179 0 1174 246 120 14 chr20 31900195 31900553 -40253329 - MER89 LTR ERV1 0 559 164 1406 231 32 21 chr20 31900709 31901047 -40252835 - L1MB5 LINE L1 -8 6166 5825 705 148 0 17 chr20 31901056 31901171 -40252711 - AluJb SINE Alu 0 312 200 1829 141 10 17 chr20 31901171 31901462 -40252420 - MER1B DNA MER1_type -50 289 1 373 197 56 0 chr20 31901615 31901686 -40252196 + MER2 DNA MER2_type 266 340 -5 1846 175 51 6 chr20 31901690 31902045 -40251837 + L1MB2 LINE L1 5783 6153 -18 1838 150 42 18 chr20 31902052 31902338 -40251544 - AluJo SINE Alu -19 293 1 2063 118 7 3 chr20 31902428 31902717 -40251165 + AluJo SINE Alu 7 296 -16 2347 52 0 43 chr20 31903122 31903427 -40250455 - AluY SINE Alu -19 292 1 2431 162 55 55 chr20 31903434 31903982 -40249900 - L1 LINE L1 -1826 4320 3773 243 0 0 0 chr20 31903994 31904021 -40249861 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 2121 124 0 0 chr20 31904022 31904305 -40249577 - AluSx SINE Alu -27 285 3 287 236 51 51 chr20 31904313 31904329 -40249553 - L1MA10 LINE L1 -1 6333 6318 989 214 96 7 chr20 31904329 31904609 -40249273 - L1ME1 LINE L1 -4 6162 5858 5839 203 58 8 chr20 31904619 31905243 -40248639 - L1MA4 LINE L1 -7 6293 5702 2289 113 10 0 chr20 31905243 31905545 -40248337 - AluSx SINE Alu -7 305 1 5839 203 58 8 chr20 31905545 31907633 -40246249 - L1MA4 LINE L1 -598 5702 3437 2192 105 10 13 chr20 31907799 31908105 -40245777 + AluSg SINE Alu 1 305 -5 2319 87 0 7 chr20 31908105 31908402 -40245480 + AluSg1 SINE Alu 1 296 -13 638 172 16 0 chr20 31910692 31910814 -40243068 - L1MA4 LINE L1 -2699 3447 3324 * 1511 209 42 34 chr20 31910808 31910874 -40243008 - L1MA4 LINE L1 -3311 2835 2771 2389 72 14 0 chr20 31910874 31911166 -40242716 - AluY SINE Alu -15 296 1 1511 209 42 34 chr20 31911166 31911188 -40242694 - L1MA4 LINE L1 -3375 2771 2751 1440 185 31 27 chr20 31911188 31911480 -40242402 + AluJo SINE Alu 1 293 -19 1511 209 42 34 chr20 31911480 31911797 -40242085 - L1MA4 LINE L1 -3395 2751 2426 490 321 75 34 chr20 31911812 31912080 -40241802 - ERVL LTR ERVL -1217 4547 4269 1319 208 156 80 chr20 31912256 31912358 -40241524 - MER45B DNA AcHobo -552 1029 936 290 155 14 0 chr20 31912358 31912368 -40241514 + (TA)n Simple_repeat Simple_repeat 2 10 -63 2336 110 0 0 chr20 31912368 31912667 -40241215 + AluSg SINE Alu 1 299 -11 290 155 14 0 chr20 31912667 31912727 -40241155 + (TA)n Simple_repeat Simple_repeat 10 73 0 1319 208 156 80 chr20 31912727 31912895 -40240987 - MER45B DNA AcHobo -645 936 782 1625 199 31 0 chr20 31912895 31913182 -40240700 - AluJb SINE Alu -11 301 6 1319 208 156 80 chr20 31913182 31913493 -40240389 - MER45B DNA AcHobo -799 782 327 323 180 131 0 chr20 31913509 31913570 -40240312 + MER45B DNA AcHobo 252 320 -720 1091 172 27 160 chr20 31914453 31914865 -40239017 - MLT1A1 LTR MaLR -3 362 6 299 238 50 12 chr20 31914961 31915041 -40238841 - LTR16B LTR ERVL -288 176 94 8221 170 67 32 chr20 31917327 31917825 -40236057 + L1MA4 LINE L1 3456 3935 -2365 1812 142 3 61 chr20 31917825 31918136 -40235746 - AluJb SINE Alu -19 293 1 8221 170 67 32 chr20 31918136 31918948 -40234934 + L1MA4 LINE L1 3935 4716 -1584 1666 162 30 17 chr20 31918948 31919245 -40234637 + AluJo SINE Alu 1 301 -11 8221 170 67 32 chr20 31919245 31920689 -40233193 + L1MA4 LINE L1 4716 6300 0 290 242 15 0 chr20 31921084 31921150 -40232732 + LTR37B LTR ERV1 346 412 -56 786 202 10 13 chr20 31921270 31921555 -40232327 + MLT1A2 LTR MaLR 5 351 -23 760 262 32 40 chr20 31921825 31922077 -40231805 + L1ME2 LINE L1 5895 6144 -20 368 252 29 10 chr20 31922522 31922625 -40231257 + L1MC5 LINE L1 7734 7838 -123 2117 121 3 10 chr20 31922835 31923133 -40230749 + AluSq SINE Alu 1 296 -17 369 0 0 0 chr20 31923514 31923555 -40230327 + (CAT)n Simple_repeat Simple_repeat 2 42 0 7614 42 9 1 chr20 31923765 31924649 -40229233 + L1PA3 LINE L1 5263 6153 -2 31 0 0 0 chr20 31924649 31924680 -40229202 + AT_rich Low_complexity Low_complexity 1 31 0 6060 67 1 3 chr20 31924680 31925422 -40228460 + L1PA7 LINE L1 5413 6153 -1 216 0 0 0 chr20 31925493 31925517 -40228365 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 325 218 188 64 chr20 31927305 31927603 -40226279 + L1MC5 LINE L1 7554 7888 -73 2621 122 112 2 chr20 31927868 31928287 -40225595 + MER4C LTR ERV1 1 465 0 262 296 0 0 chr20 31928391 31928472 -40225410 - L1M4 LINE L1 -1034 5923 5843 * 1160 274 82 21 chr20 31928451 31928972 -40224910 - L1M4 LINE L1 -1718 5239 4687 827 122 23 0 chr20 31928986 31929117 -40224765 + MER4C LTR ERV1 2 135 -330 2149 52 19 42 chr20 31929132 31929439 -40224443 + AluY SINE Alu 2 301 -10 1218 104 0 0 chr20 31929439 31929602 -40224280 + AluY SINE Alu 133 295 -16 288 89 0 22 chr20 31929602 31929647 -40224235 + MER4C LTR ERV1 128 171 -294 282 341 0 0 chr20 31929657 31929742 -40224140 - L1M4 LINE L1 -2334 4623 4539 473 213 125 31 chr20 31929747 31929907 -40223975 + L1ME2 LINE L1 5980 6154 -10 1590 184 65 0 chr20 31930288 31930581 -40223301 + AluJb SINE Alu 1 312 0 1426 232 171 29 chr20 31930996 31931768 -40222114 + L1M4c LINE L1 548 1429 -4955 1239 268 36 43 chr20 31931765 31932179 -40221703 - L1M4 LINE L1 -6436 423 13 * 339 269 69 113 chr20 31932537 31932872 -40221010 + L1MC5 LINE L1 7609 7928 -33 410 194 60 27 chr20 31933133 31933286 -40220596 + L1ME1 LINE L1 6028 6161 -5 2070 122 7 0 chr20 31933375 31933661 -40220221 - AluSx SINE Alu -24 288 1 653 286 76 13 chr20 31934409 31934647 -40219235 - MIR SINE MIR -1 261 9 2244 201 68 105 chr20 31934911 31935279 -40218603 + MER4E LTR ERV1 1 381 -398 2238 104 0 10 chr20 31935279 31935588 -40218294 + AluSx SINE Alu 7 312 0 2244 201 68 105 chr20 31935588 31935842 -40218040 + MER4E LTR ERV1 381 591 -188 1297 171 123 34 chr20 31935842 31936111 -40217771 - AluJo SINE Alu -9 293 1 2244 201 68 105 chr20 31936111 31936269 -40217613 + MER4E LTR ERV1 591 753 -26 36 29 0 43 chr20 31937666 31937735 -40216147 + AT_rich Low_complexity Low_complexity 1 66 0 10781 170 30 11 chr20 31937976 31941010 -40212872 - L1MA4 LINE L1 -2 7000 3909 * 31971 106 15 59 chr20 31941000 31947437 -40206445 - L1PA7 LINE L1 -4 6150 12 3354 201 35 60 chr20 31947446 31948750 -40205132 - L1MA4 LINE L1 -2923 3925 2645 31609 79 6 9 chr20 31948781 31953935 -40199947 - L1PA7 LINE L1 0 6154 1018 44096 45 1 3 chr20 31953941 31960098 -40193784 - L1PA3 LINE L1 -5 6150 7 5557 168 16 26 chr20 31960112 31961146 -40192736 - L1PA7 LINE L1 -5112 1034 11 225 220 0 0 chr20 31961189 31961239 -40192643 - Tigger3(Golem) DNA MER2_type -2782 247 198 2666 152 75 6 chr20 31961242 31961736 -40192146 - L1PB4 LINE L1 -2 6154 5627 2149 117 10 13 chr20 32161740 32162048 -39991834 + AluSx SINE Alu 6 312 0 263 316 79 72 chr20 32162065 32162204 -39991678 - L2 LINE L2 -9 3263 3124 * 283 237 53 0 chr20 32162171 32162247 -39991635 - L2 LINE L2 -308 2964 2885 2370 88 3 0 chr20 32162248 32162545 -39991337 + AluY SINE Alu 1 298 -13 2333 112 0 0 chr20 32162563 32162876 -39991006 + AluSq SINE Alu 1 313 0 710 176 145 0 chr20 32163001 32163154 -39990728 + AluSg/x SINE Alu 133 304 0 1682 136 101 0 chr20 32163431 32163717 -39990165 + AluSx SINE Alu 1 312 0 308 214 0 54 chr20 32164022 32164068 -39989814 - MIR SINE MIR -64 144 151 2115 127 0 7 chr20 32164068 32164367 -39989515 - AluSx SINE Alu -15 297 1 308 214 0 54 chr20 32164367 32164437 -39989445 - MIR SINE MIR -56 152 80 1835 118 57 7 chr20 32164658 32164937 -39988945 - AluSx SINE Alu -19 293 1 2587 75 0 0 chr20 32164938 32165246 -39988636 - AluSx SINE Alu -4 308 1 279 50 0 0 chr20 32165771 32165811 -39988071 - AluSx SINE Alu -3 298 259 1541 131 5 0 chr20 32165811 32166032 -39987850 - AluSx SINE Alu -90 222 1 2308 103 3 0 chr20 32166042 32166344 -39987538 - AluSx SINE Alu -9 303 1 732 240 17 6 chr20 32166344 32166519 -39987363 - MLT1G1 LTR MaLR -379 216 40 2570 80 27 0 chr20 32166539 32166876 -39987006 - L1PA10 LINE L1 0 6168 5823 968 158 6 0 chr20 32166876 32167034 -39986848 - FRAM SINE Alu -7 159 1 670 185 0 0 chr20 32167228 32167336 -39986546 + AluJ SINE Alu 2 109 -203 2150 100 4 4 chr20 32167348 32167667 -39986215 - AluSc SINE Alu 0 319 1 880 152 18 61 chr20 32167671 32167726 -39986156 - L1MDa LINE L1 -6366 174 118 2125 151 0 0 chr20 32167726 32168037 -39985845 - AluSx SINE Alu -1 311 1 880 152 18 61 chr20 32168037 32168145 -39985737 - L1MDa LINE L1 -6422 118 18 920 214 49 35 chr20 32168227 32168512 -39985370 - L1MC5 LINE L1 -493 7468 7180 708 272 210 7 chr20 32168506 32168815 -39985067 + L1MC/D LINE L1 5355 5726 -2082 * 1246 173 10 10 chr20 32168819 32169027 -39984855 + AluJb SINE Alu 87 294 -18 681 267 54 47 chr20 32169183 32169441 -39984441 + LTR16C LTR ERVL 135 394 -97 2411 63 7 7 chr20 32169575 32169877 -39984005 + AluY SINE Alu 1 302 -9 1683 125 14 35 chr20 32171487 32171804 -39982078 + L1PA8 LINE L1 5875 6185 0 3853 220 14 36 chr20 32171804 32172833 -39981049 - L1M2 LINE L1 -1921 5246 4241 11255 174 16 19 chr20 32172850 32173758 -39980124 - L1PA13 LINE L1 -6 6808 5899 2303 127 82 17 chr20 32173758 32174160 -39979722 - MSTA LTR MaLR 0 428 1 11255 174 16 19 chr20 32174160 32176210 -39977672 - L1PA13 LINE L1 -915 5899 3818 3813 147 18 0 chr20 32176226 32176798 -39977084 - L1PA13 LINE L1 -6205 582 1 930 236 40 37 chr20 32176815 32177113 -39976769 - L1M2 LINE L1 -2932 4235 3934 2652 55 0 0 chr20 32177113 32177423 -39976459 - AluY SINE Alu -1 310 1 930 236 40 37 chr20 32177423 32177472 -39976410 - L1M2 LINE L1 -3233 3934 3887 4405 239 167 38 chr20 32177478 32178601 -39975281 + L1 LINE L1 1 978 -6059 1368 183 25 110 chr20 32178601 32179000 -39974882 - MLT1A1 LTR MaLR 0 365 1 4405 239 167 38 chr20 32179000 32179971 -39973911 + L1 LINE L1 978 2465 -4572 7436 171 28 12 chr20 32179979 32181445 -39972437 + L1 LINE L1 4643 6131 -975 27 0 0 0 chr20 32181554 32181581 -39972301 + AT_rich Low_complexity Low_complexity 1 27 0 1918 86 0 0 chr20 32182482 32182714 -39971168 - AluSx SINE Alu -69 243 12 5380 239 171 27 chr20 32182723 32184749 -39969133 - L1 LINE L1 -4450 2399 63 368 185 0 12 chr20 32184749 32184830 -39969052 + MADE1 DNA Mariner 1 80 0 5380 239 171 27 chr20 32184830 32184892 -39968990 - L1 LINE L1 -6786 63 11 2418 266 62 50 chr20 32184898 32185748 -39968134 - L1M2 LINE L1 -4172 2996 2107 2205 122 7 0 chr20 32185748 32186044 -39967838 - AluSx SINE Alu -14 298 1 2418 266 62 50 chr20 32186044 32186664 -39967218 - L1M2 LINE L1 -5061 2107 1496 186 103 0 0 chr20 32187357 32187386 -39966496 + (GA)n Simple_repeat Simple_repeat 2 30 0 1073 157 0 20 chr20 32187431 32187629 -39966253 - L1PB1 LINE L1 -1 6150 5957 244 303 112 20 chr20 32187703 32187855 -39966027 - MIR SINE MIR -66 196 31 632 118 0 0 chr20 32187862 32187947 -39965935 + L1PA5 LINE L1 11 95 -6051 36722 63 5 7 chr20 32187947 32193489 -39960393 + L1PA5 LINE L1 622 6152 -2 27 31 0 62 chr20 32193897 32193961 -39959921 + AT_rich Low_complexity Low_complexity 1 60 0 1912 194 7 61 chr20 32194930 32195342 -39958540 - MLT1B LTR MaLR 0 390 1 694 250 68 14 chr20 32196128 32196348 -39957534 + MIR SINE MIR 23 254 -8 272 196 0 0 chr20 32197418 32197469 -39956413 - L2 LINE L2 -2 3311 3261 271 319 0 0 chr20 32199903 32199997 -39953885 - MIR SINE MIR -12 250 157 466 284 117 44 chr20 32200104 32200421 -39953461 + L3 LINE CR1 1178 1517 -60 204 127 127 0 chr20 32200511 32200566 -39953316 - L2 LINE L2 -157 3156 3095 222 204 0 0 chr20 32200579 32200623 -39953259 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 91 0 0 chr20 32200900 32200933 -39952949 + (TG)n Simple_repeat Simple_repeat 2 34 0 680 313 34 11 chr20 32200961 32201308 -39952574 - L2 LINE L2 -204 3109 2752 2107 115 3 0 chr20 32201637 32201923 -39951959 - AluSx SINE Alu -25 287 1 304 176 24 47 chr20 32201927 32202012 -39951870 - MER113 DNA MER1_type? -428 93 11 371 301 15 30 chr20 32202034 32202167 -39951715 - MIR3 SINE MIR -65 143 13 1646 212 136 43 chr20 32202226 32202557 -39951325 - L1MD2 LINE L1 -11 6231 5877 2110 118 28 0 chr20 32202557 32202844 -39951038 - AluSx SINE Alu -17 295 1 1646 212 136 43 chr20 32202844 32203106 -39950776 - L1MD2 LINE L1 -365 5877 5641 * 4415 184 14 51 chr20 32203104 32204549 -39949333 - L1MA6 LINE L1 -317 5983 4597 2106 117 75 3 chr20 32204553 32204887 -39948995 + MER83 LTR ERV1 91 448 0 2355 114 0 38 chr20 32204889 32204917 -39948965 - Tigger2a DNA MER2_type -2351 357 329 2739 141 27 14 chr20 32204917 32205356 -39948526 + MER65A LTR ERV1 1 445 0 2355 114 0 38 chr20 32205356 32205696 -39948186 - Tigger2a DNA MER2_type -2379 329 3 604 248 63 76 chr20 32205701 32206004 -39947878 + LTR57-int LTR ERVL 1274 1572 -3771 994 175 96 13 chr20 32206266 32206534 -39947348 - MER31-int LTR ERV1 -621 5977 4002 * 1404 183 11 18 chr20 32206529 32206808 -39947074 - MER31-int LTR ERV1 -1113 3823 3547 2384 232 24 18 chr20 32206818 32207370 -39946512 + MER57-int LTR ERV1 3549 4103 -768 1072 197 127 84 chr20 32207407 32207619 -39946263 + MER57-int LTR ERV1 6636 6873 -664 2277 74 0 3 chr20 32207619 32207928 -39945954 - AluSc SINE Alu 0 308 1 1072 197 127 84 chr20 32207928 32208084 -39945798 + MER57-int LTR ERV1 6873 7021 -516 1527 163 18 15 chr20 32208084 32208395 -39945487 + MER61B LTR ERV1 1 396 -28 661 195 49 0 chr20 32208415 32208538 -39945344 + MER57-int LTR ERV1 7016 7144 -393 2063 189 22 93 chr20 32208538 32208921 -39944961 + LTR54 LTR ERV1 1 335 -175 2259 99 0 31 chr20 32208921 32209244 -39944638 - AluSq SINE Alu 0 313 1 2063 189 22 93 chr20 32209244 32209409 -39944473 + LTR54 LTR ERV1 335 510 0 1112 200 14 9 chr20 32209409 32209712 -39944170 - L1M1 LINE L1 -4161 3405 2868 1823 243 91 21 chr20 32209755 32210314 -39943568 - L1M1 LINE L1 -6469 1097 500 382 311 15 15 chr20 32210339 32210474 -39943408 - L1M3c LINE L1 -6005 136 2 21 57 0 0 chr20 32210523 32210558 -39943324 + AT_rich Low_complexity Low_complexity 1 35 0 831 161 0 0 chr20 32211075 32211255 -39942627 + (CATTC)n Satellite Satellite 1 180 0 876 157 0 5 chr20 32211268 32212052 -39941830 + (CATTC)n Satellite Satellite 1 779 0 1020 128 0 0 chr20 32212094 32212306 -39941576 + (CATTC)n Satellite Satellite 1 253 0 249 98 0 0 chr20 32212306 32212347 -39941535 + (CATTC)n Satellite Satellite 4 44 0 707 173 0 3 chr20 32212381 32212740 -39941142 + (CATTC)n Satellite Satellite 1 357 0 1035 147 1 0 chr20 32212754 32213498 -39940384 + (CATTC)n Satellite Satellite 1 744 0 225 83 83 0 chr20 32213505 32213541 -39940341 + HSATII Satellite Satellite 98 136 -34 798 153 0 0 chr20 32213549 32213726 -39940156 + (CATTC)n Satellite Satellite 3 179 0 778 143 0 13 chr20 32213759 32214061 -39939821 + (CATTC)n Satellite Satellite 1 297 0 816 156 0 0 chr20 32214080 32214260 -39939622 + (CATTC)n Satellite Satellite 1 180 0 312 164 0 0 chr20 32214281 32214348 -39939534 + (CATTC)n Satellite Satellite 2 68 0 1479 72 1 0 chr20 32214381 32215094 -39938788 + (CATTC)n Satellite Satellite 1 714 0 789 172 0 0 chr20 32215129 32215483 -39938399 + (CATTC)n Satellite Satellite 1 354 0 339 132 0 0 chr20 32215498 32215566 -39938316 + (CATTC)n Satellite Satellite 1 68 0 880 110 0 28 chr20 32215586 32215768 -39938114 + (CATTC)n Satellite Satellite 4 180 0 876 160 0 0 chr20 32215788 32216408 -39937474 + (CATTC)n Satellite Satellite 1 620 0 501 193 0 0 chr20 32216429 32216574 -39937308 + (CATTC)n Satellite Satellite 2 146 0 672 133 0 48 chr20 32216593 32216781 -39937101 + (CATTC)n Satellite Satellite 1 179 0 866 136 4 14 chr20 32216799 32217084 -39936798 + (CATTC)n Satellite Satellite 1 282 0 861 136 0 0 chr20 32217103 32217280 -39936602 + (CATTC)n Satellite Satellite 4 180 0 681 144 0 0 chr20 32217294 32217440 -39936442 + (CATTC)n Satellite Satellite 5 150 0 828 168 0 0 chr20 32217460 32217795 -39936087 + (CATTC)n Satellite Satellite 1 335 0 683 194 4 0 chr20 32217813 32218068 -39935814 + (CATTC)n Satellite Satellite 1 256 0 873 163 0 0 chr20 32218096 32218921 -39934961 + (CATTC)n Satellite Satellite 1 825 0 939 158 3 0 chr20 32218944 32219296 -39934586 + (CATTC)n Satellite Satellite 1 353 0 855 175 0 0 chr20 32219322 32219847 -39934035 + (CATTC)n Satellite Satellite 1 525 0 828 171 0 0 chr20 32219869 32220167 -39933715 + (CATTC)n Satellite Satellite 1 298 0 927 148 3 5 chr20 32220186 32220809 -39933073 + (CATTC)n Satellite Satellite 1 622 0 1155 161 3 3 chr20 32220820 32221489 -39932393 + (CATTC)n Satellite Satellite 1 669 0 699 174 0 0 chr20 32221505 32222019 -39931863 + (CATTC)n Satellite Satellite 1 514 0 1011 155 0 3 chr20 32222054 32222401 -39931481 + (CATTC)n Satellite Satellite 3 347 0 948 133 0 0 chr20 32222412 32222592 -39931290 + (CATTC)n Satellite Satellite 1 180 0 1230 162 0 7 chr20 32222612 32223990 -39929892 + (CATTC)n Satellite Satellite 1 1368 0 247 290 0 0 chr20 32223990 32224052 -39929830 + (CACTC)n Simple_repeat Simple_repeat 1 62 0 873 172 3 0 chr20 32224059 32224702 -39929180 + (CATTC)n Satellite Satellite 1 645 0 675 178 4 4 chr20 32224722 32225217 -39928665 + (CATTC)n Satellite Satellite 1 495 0 203 103 26 0 chr20 32225208 32225247 -39928635 + HSATII Satellite Satellite 21 60 -110 * 1233 147 4 3 chr20 32225265 32225975 -39927907 + (CATTC)n Satellite Satellite 1 711 0 748 144 12 0 chr20 32225991 32226164 -39927718 + (CATTC)n Satellite Satellite 1 175 0 887 122 6 0 chr20 32226191 32226363 -39927519 + (CATTC)n Satellite Satellite 3 175 0 978 122 0 0 chr20 32226382 32226562 -39927320 + (CATTC)n Satellite Satellite 1 180 0 828 144 0 0 chr20 32226584 32226871 -39927011 + (CATTC)n Satellite Satellite 1 287 0 932 167 2 3 chr20 32226917 32227968 -39925914 + (CATTC)n Satellite Satellite 1 1049 0 805 161 1 12 chr20 32228032 32228873 -39925009 + (CATTC)n Satellite Satellite 1 831 0 846 152 0 0 chr20 32228951 32229191 -39924691 + (CATTC)n Satellite Satellite 1 240 0 960 154 0 0 chr20 32229226 32229560 -39924322 + (CATTC)n Satellite Satellite 1 334 0 752 186 3 3 chr20 32229571 32229928 -39923954 + (CATTC)n Satellite Satellite 1 357 0 915 170 3 3 chr20 32229950 32230620 -39923262 + (CATTC)n Satellite Satellite 1 670 0 491 195 0 6 chr20 32230642 32230811 -39923071 + (CATTC)n Satellite Satellite 2 169 0 876 152 0 0 chr20 32230822 32231077 -39922805 + (CATTC)n Satellite Satellite 1 255 0 678 175 0 0 chr20 32231102 32231279 -39922603 + (CATTC)n Satellite Satellite 4 180 0 384 206 0 0 chr20 32231294 32231420 -39922462 + (CATTC)n Satellite Satellite 2 127 0 978 172 4 0 chr20 32231442 32231720 -39922162 + (CATTC)n Satellite Satellite 1 279 0 1032 155 0 1 chr20 32231739 32232471 -39921411 + (CATTC)n Satellite Satellite 1 731 0 312 212 0 0 chr20 32232523 32232655 -39921227 + (CATTC)n Satellite Satellite 3 134 0 454 207 3 6 chr20 32232682 32233018 -39920864 + (CATTC)n Satellite Satellite 1 334 0 819 167 0 0 chr20 32233041 32233411 -39920471 + (CATTC)n Satellite Satellite 1 370 0 978 166 2 2 chr20 32233436 32234098 -39919784 + (CATTC)n Satellite Satellite 1 662 0 700 158 6 6 chr20 32234139 32234316 -39919566 + (CATTC)n Satellite Satellite 4 180 0 794 131 0 27 chr20 32234333 32234516 -39919366 + (CATTC)n Satellite Satellite 3 180 0 348 206 0 0 chr20 32234533 32234659 -39919223 + (CATTC)n Satellite Satellite 3 128 0 859 128 6 6 chr20 32234686 32234865 -39919017 + (CATTC)n Satellite Satellite 1 179 0 788 162 3 0 chr20 32234912 32235211 -39918671 + (CATTC)n Satellite Satellite 1 300 0 870 135 0 0 chr20 32235222 32235400 -39918482 + (CATTC)n Satellite Satellite 3 180 0 770 171 2 0 chr20 32235430 32235908 -39917974 + (CATTC)n Satellite Satellite 1 479 0 812 147 0 27 chr20 32235949 32236133 -39917749 + (CATTC)n Satellite Satellite 1 179 0 699 174 0 0 chr20 32236190 32236368 -39917514 + (CATTC)n Satellite Satellite 3 180 0 870 140 0 0 chr20 32236394 32236573 -39917309 + (CATTC)n Satellite Satellite 2 180 0 828 151 0 0 chr20 32236608 32236787 -39917095 + (CATTC)n Satellite Satellite 1 179 0 744 164 0 0 chr20 32236841 32237018 -39916864 + (CATTC)n Satellite Satellite 4 180 0 789 159 0 0 chr20 32237031 32237361 -39916521 + (CATTC)n Satellite Satellite 1 330 0 729 168 0 0 chr20 32237379 32237558 -39916324 + (CATTC)n Satellite Satellite 2 180 0 936 144 4 7 chr20 32237573 32238550 -39915332 + (CATTC)n Satellite Satellite 1 974 0 825 139 0 0 chr20 32238566 32238739 -39915143 + (CATTC)n Satellite Satellite 3 175 0 1002 166 3 9 chr20 32238770 32239422 -39914460 + (CATTC)n Satellite Satellite 1 648 0 1163 121 2 6 chr20 32239438 32239929 -39913953 + (CATTC)n Satellite Satellite 1 488 0 609 190 0 0 chr20 32239960 32240139 -39913743 + (CATTC)n Satellite Satellite 2 180 0 468 214 0 0 chr20 32240180 32240358 -39913524 + (CATTC)n Satellite Satellite 2 179 0 1310 51 23 0 chr20 32240739 32240916 -39912966 - L1PA8A LINE L1 -229 5902 5722 318 152 98 11 chr20 32240917 32241009 -39912873 + L1 LINE L1 4217 4316 -1830 25 65 0 0 chr20 32242608 32242654 -39911228 + AT_rich Low_complexity Low_complexity 1 46 0 246 32 0 0 chr20 32243217 32243248 -39910634 + (TG)n Simple_repeat Simple_repeat 1 31 0 7841 183 7 0 chr20 32244156 32246656 -39907226 + L1PA15 LINE L1 3661 6159 -6 534 144 0 0 chr20 32246673 32246763 -39907119 - L1 LINE L1 -2585 3561 3472 642 139 15 0 chr20 32246766 32246877 -39907005 + MSTC LTR MaLR 1 116 -249 13845 157 70 34 chr20 32246877 32249577 -39904305 + L1MA1 LINE L1 27 2832 -4733 1691 193 0 27 chr20 32249577 32249872 -39904010 + AluJb SINE Alu 3 289 -23 13845 157 70 34 chr20 32249872 32249939 -39903943 + L1MA1 LINE L1 2832 2895 -4670 304 277 0 43 chr20 32249951 32250045 -39903837 - L1MC4 LINE L1 -1339 6703 6614 304 239 68 23 chr20 32249991 32250079 -39903803 + L1MC4 LINE L1 6614 6705 -1337 419 168 0 10 chr20 32250081 32250182 -39903700 + (TA)n Simple_repeat Simple_repeat 2 101 0 11603 156 44 21 chr20 32250195 32253839 -39900043 + L1MA1 LINE L1 3987 7717 -4 28 48 0 0 chr20 32253853 32253895 -39899987 + AT_rich Low_complexity Low_complexity 1 42 0 218 212 45 0 chr20 32253981 32254047 -39899835 + A-rich Low_complexity Low_complexity 2 70 0 234 363 60 12 chr20 32255137 32255305 -39898577 - L2 LINE L2 -883 2431 2256 984 118 0 0 chr20 32255492 32255627 -39898255 - AluSg/x SINE Alu -3 309 175 189 0 0 0 chr20 32256034 32256055 -39897827 + (A)n Simple_repeat Simple_repeat 1 21 0 241 340 60 26 chr20 32256063 32256331 -39897551 - L2 LINE L2 -1310 2004 1728 663 338 30 4 chr20 32257413 32257644 -39896238 + MIR SINE MIR 18 254 -8 309 375 86 7 chr20 32258279 32258477 -39895405 - MIR SINE MIR -50 212 3 30 0 0 0 chr20 32259340 32259370 -39894512 + AT_rich Low_complexity Low_complexity 1 30 0 273 344 49 8 chr20 32259683 32259805 -39894077 - MER5B DNA MER1_type -30 148 22 256 373 45 0 chr20 32260091 32260201 -39893681 - L2 LINE L2 0 3313 3199 335 305 0 17 chr20 32260479 32260597 -39893285 + GA-rich Low_complexity Low_complexity 5 120 0 1020 196 10 82 chr20 32260881 32261187 -39892695 - L1MA10 LINE L1 -4 6330 6047 1974 167 8 0 chr20 32261187 32261558 -39892324 + L1 LINE L1 4889 5262 -884 608 62 0 0 chr20 32262843 32262923 -39890959 + L1PA7 LINE L1 6075 6154 0 1691 156 12 21 chr20 32262920 32263253 -39890629 - L1MA7 LINE L1 -176 6115 5786 432 156 135 0 chr20 32263248 32263344 -39890538 + L1MA6 LINE L1 6094 6202 -98 * 2163 239 53 23 chr20 32263354 32264477 -39889405 - L1 LINE L1 -3726 3839 2688 4066 127 9 0 chr20 32264492 32265131 -39888751 - Tigger1 DNA MER2_type -906 1512 868 2491 43 0 0 chr20 32265446 32265750 -39888132 - L1PA5 LINE L1 -5 6149 5846 2324 96 0 10 chr20 32266858 32267171 -39886711 + AluSx SINE Alu 2 311 -1 953 273 104 11 chr20 32267671 32268445 -39885437 - L1ME3A LINE L1 -289 5864 5005 529 288 84 0 chr20 32268502 32268776 -39885106 - L1ME3A LINE L1 -1231 4898 4602 2532 50 0 28 chr20 32268899 32269217 -39884665 - AluSc SINE Alu 0 309 1 484 321 42 18 chr20 32269360 32269740 -39884142 - L1ME3A LINE L1 -2210 3919 3531 417 303 114 53 chr20 32269861 32270333 -39883549 - L1ME3A LINE L1 -2594 3535 3035 398 260 195 5 chr20 32270347 32270547 -39883335 - L1ME4a LINE L1 -11 6110 5873 255 322 56 26 chr20 32270864 32271134 -39882748 - L1MC4 LINE L1 -571 7471 7194 762 266 25 106 chr20 32271177 32271707 -39882175 - L1MC4 LINE L1 -852 7109 6626 555 269 23 23 chr20 32272090 32272350 -39881532 - L1ME3A LINE L1 -3581 2548 2289 1052 276 63 52 chr20 32272512 32273220 -39880662 - L1MEd LINE L1 -4520 1609 910 1791 175 3 3 chr20 32273220 32273517 -39880365 - AluJb SINE Alu -15 297 1 1052 276 63 52 chr20 32273517 32273586 -39880296 - L1MEd LINE L1 -5219 910 843 1963 129 6 38 chr20 32273586 32273903 -39879979 - AluSx SINE Alu -5 307 1 1052 276 63 52 chr20 32273903 32274267 -39879615 - L1MEd LINE L1 -5286 843 455 21 71 0 0 chr20 32275417 32275459 -39878423 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr20 32275741 32275766 -39878116 + AT_rich Low_complexity Low_complexity 1 25 0 313 288 23 5 chr20 32275770 32275972 -39877910 - L1ME LINE L1 -318 5844 5125 250 351 9 18 chr20 32276977 32277088 -39876794 + MIR SINE MIR 26 135 -73 22 0 0 0 chr20 32278076 32278098 -39875784 + AT_rich Low_complexity Low_complexity 1 22 0 964 211 330 18 chr20 32278099 32278645 -39875237 - LTR50 LTR ERVL -63 732 17 1961 218 21 64 chr20 32279238 32279976 -39873906 + L1M4c LINE L1 2329 3027 -3355 2527 47 3 0 chr20 32279989 32280288 -39873594 + AluY SINE Alu 1 300 -11 4030 178 50 3 chr20 32280567 32281415 -39872467 + L1 LINE L1 4268 5158 -1224 1743 133 74 20 chr20 32281415 32281766 -39872116 + L1MA9 LINE L1 5942 6312 0 4030 178 50 3 chr20 32281766 32281780 -39872102 + L1 LINE L1 5158 5170 -1212 185 309 85 32 chr20 32282063 32282157 -39871725 - MIR SINE MIR -70 138 40 24 85 0 0 chr20 32282216 32282275 -39871607 + AT_rich Low_complexity Low_complexity 1 59 0 2233 114 0 0 chr20 32283051 32283349 -39870533 - AluSq SINE Alu -15 298 1 410 226 84 71 chr20 32283895 32284134 -39869748 + LTR16A LTR ERVL 18 324 -126 1816 82 0 0 chr20 32284134 32284353 -39869529 - AluSc SINE Alu -17 292 74 410 226 84 71 chr20 32284353 32284475 -39869407 + LTR16A LTR ERVL 324 443 -7 1322 268 17 0 chr20 32284533 32284828 -39869054 + AluJo SINE Alu 1 300 -12 205 28 0 56 chr20 32284828 32284864 -39869018 + (GGAGAA)n Simple_repeat Simple_repeat 1 34 0 203 133 0 0 chr20 32284869 32284899 -39868983 + (AGGGGG)n Simple_repeat Simple_repeat 3 32 0 828 139 26 11 chr20 32284900 32285255 -39868627 + GA-rich Low_complexity Low_complexity 1 360 0 42301 36 2 2 chr20 32286587 32292734 -39861148 + L1PA3 LINE L1 7 6152 -3 2112 147 0 0 chr20 32294507 32294819 -39859063 + AluSx SINE Alu 1 312 0 2015 81 77 0 chr20 32296051 32296323 -39857559 - AluY SINE Alu -17 294 2 2722 3 0 0 chr20 32297287 32297581 -39856301 + AluY SINE Alu 1 294 -17 38 0 0 0 chr20 32299505 32299543 -39854339 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr20 32300041 32300063 -39853819 + AT_rich Low_complexity Low_complexity 1 22 0 1103 98 5 43 chr20 32300679 32300863 -39853019 + LTR8 LTR ERV1 411 587 -104 2243 119 3 6 chr20 32301043 32301354 -39852528 + AluSq SINE Alu 2 311 -2 10344 155 24 16 chr20 32301530 32303350 -39850532 + L1M1 LINE L1 16 1850 -5715 1669 224 70 6 chr20 32303345 32303828 -39850054 + L1MC3 LINE L1 5872 6385 -1400 * 1157 169 5 0 chr20 32303821 32304016 -39849866 + L1MC3 LINE L1 6627 6822 -963 * 194 380 0 22 chr20 32304164 32304256 -39849626 + L2 LINE L2 2885 2974 -340 938 196 108 31 chr20 32304267 32304527 -39849355 + MLT1F LTR MaLR 259 538 -4 391 231 0 13 chr20 32305130 32305208 -39848674 + MIR SINE MIR 3 79 -183 3775 13 25 7 chr20 32305775 32306224 -39847658 + L1PA2 LINE L1 5696 6152 -3 468 286 48 41 chr20 32306378 32306647 -39847235 + HAL1 LINE L1 1256 1526 -981 674 167 0 0 chr20 32306661 32306763 -39847119 + AluJ/FLAM SINE Alu 1 102 -210 273 288 0 12 chr20 32307455 32307535 -39846347 + MIR3 SINE MIR 96 174 -34 28 48 0 0 chr20 32307628 32307670 -39846212 + AT_rich Low_complexity Low_complexity 1 42 0 355 284 72 64 chr20 32308773 32309058 -39844824 - L1MC4a LINE L1 -1826 5982 5701 351 0 0 0 chr20 32309058 32309097 -39844785 + (TA)n Simple_repeat Simple_repeat 2 40 0 355 284 72 64 chr20 32309097 32309110 -39844772 - L1MC4a LINE L1 -2107 5701 5690 2447 78 0 0 chr20 32309110 32309405 -39844477 - AluY SINE Alu -16 295 1 355 284 72 64 chr20 32309405 32309496 -39844386 - L1MC4a LINE L1 -2118 5690 5589 266 296 69 13 chr20 32309632 32309791 -39844091 + HAL1 LINE L1 1494 1661 -846 469 116 0 0 chr20 32309841 32309910 -39843972 + Alu SINE Alu 235 303 -9 529 307 74 70 chr20 32309910 32310009 -39843873 + L1M4 LINE L1 2324 2421 -3725 1452 190 39 28 chr20 32310009 32310293 -39843589 + AluJb SINE Alu 1 287 -25 529 307 74 70 chr20 32310293 32310734 -39843148 + L1M4 LINE L1 2421 2866 -3280 549 146 11 0 chr20 32310741 32310830 -39843052 + 5S rRNA rRNA 1 90 -31 364 275 44 25 chr20 32310872 32311032 -39842850 - MLT1H LTR MaLR -386 163 1 261 244 204 47 chr20 32311032 32311204 -39842678 + L1ME3A LINE L1 5956 6154 -16 5923 145 19 9 chr20 32311817 32313468 -39840414 + L1MA6 LINE L1 4640 6300 0 810 202 24 12 chr20 32313541 32313709 -39840173 + MER5A DNA MER1_type 17 186 -3 741 172 18 25 chr20 32313793 32313956 -39839926 - L1MA10 LINE L1 0 6334 6173 2197 112 26 0 chr20 32314079 32314383 -39839499 + AluSx SINE Alu 1 312 0 2255 49 4 4 chr20 32315253 32315520 -39838362 + AluY SINE Alu 2 268 -43 222 37 0 0 chr20 32315526 32315553 -39838329 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr20 32315760 32315783 -39838099 + AT_rich Low_complexity Low_complexity 1 23 0 266 143 0 0 chr20 32315832 32315874 -39838008 + L1ME1 LINE L1 3812 3853 -2293 3767 89 31 22 chr20 32315874 32316457 -39837425 + L1MA8 LINE L1 5702 6289 -2 331 194 125 0 chr20 32316499 32316571 -39837311 + AluJb SINE Alu 43 123 -179 2713 223 64 33 chr20 32316585 32316952 -39836930 + L1ME1 LINE L1 3840 4194 -1952 2023 130 0 3 chr20 32316952 32317266 -39836616 + AluY SINE Alu 1 311 0 2713 223 64 33 chr20 32317266 32317724 -39836158 + L1ME1 LINE L1 4194 4691 -1455 227 160 0 120 chr20 32317725 32317779 -39836103 + L1ME1 LINE L1 5380 5424 -2361 2274 110 3 0 chr20 32317779 32318079 -39835803 + AluSx SINE Alu 1 301 -11 227 160 0 120 chr20 32318079 32318099 -39835783 + L1ME1 LINE L1 5424 5445 -2340 2096 99 55 39 chr20 32318099 32318462 -39835420 - THE1C LTR MaLR 0 375 7 2783 97 5 10 chr20 32318466 32318849 -39835033 - THE1C-int LTR MaLR -4 1576 1196 2562 53 0 3 chr20 32318850 32319151 -39834731 + AluY SINE Alu 1 300 -11 2395 194 59 83 chr20 32319177 32319920 -39833962 + L1ME1 LINE L1 5437 6161 -5 340 95 10 0 chr20 32319932 32319990 -39833892 + AluSx SINE Alu 1 42 -266 1879 127 0 8 chr20 32320104 32320372 -39833510 + AluSx SINE Alu 41 306 -6 180 0 0 0 chr20 32320574 32320594 -39833288 + (T)n Simple_repeat Simple_repeat 1 20 0 182 351 32 0 chr20 32320867 32320961 -39832921 - L3 LINE CR1 -100 1477 1381 1876 148 13 26 chr20 32320986 32321297 -39832585 + AluJo SINE Alu 1 307 -5 1309 98 16 22 chr20 32321702 32321885 -39831997 - AluSg/x SINE Alu -13 299 118 278 304 172 49 chr20 32322029 32322233 -39831649 - L2 LINE L2 -2 3270 3042 2441 95 0 3 chr20 32323257 32323561 -39830321 - AluSx SINE Alu -9 303 1 227 279 140 39 chr20 32323573 32323802 -39830080 - L1MC/D LINE L1 -1925 5883 5632 1843 136 0 0 chr20 32324617 32324882 -39829000 - AluSx SINE Alu -7 305 41 422 305 159 11 chr20 32324944 32325256 -39828626 + L2 LINE L2 2782 3137 -176 1331 120 11 0 chr20 32325333 32325524 -39828358 - AluSg/x SINE Alu -1 309 117 3683 84 4 2 chr20 32325563 32326048 -39827834 - L1PB3 LINE L1 0 6154 5669 2337 84 3 0 chr20 32326141 32326427 -39827455 + AluSc SINE Alu 1 287 -22 905 293 79 8 chr20 32327786 32328304 -39825578 - HERVL LTR ERVL -1504 3981 3420 470 284 93 93 chr20 32328311 32329009 -39824873 - L1MEd LINE L1 -5270 849 149 2384 104 0 0 chr20 32329009 32329317 -39824565 - AluSg SINE Alu 0 310 3 470 284 93 93 chr20 32329317 32329423 -39824459 - L1MEd LINE L1 -5969 150 45 188 273 91 37 chr20 32329999 32330186 -39823696 - L2 LINE L2 -1216 2098 1902 214 287 52 52 chr20 32330337 32330473 -39823409 - L2 LINE L2 -1406 1908 1773 186 343 40 0 chr20 32330674 32330773 -39823109 - L3 LINE CR1 -153 1424 1322 2660 236 77 88 chr20 32331431 32331510 -39822372 + L1MDa LINE L1 18 96 -6444 219 69 0 0 chr20 32331510 32331539 -39822343 + (TG)n Simple_repeat Simple_repeat 2 30 0 2660 236 77 88 chr20 32331539 32332421 -39821461 + L1MDa LINE L1 96 1130 -5410 616 226 67 5 chr20 32332423 32332612 -39821270 - L1MD2 LINE L1 -322 5829 5660 2052 100 4 0 chr20 32332813 32333074 -39820808 - AluSx SINE Alu -15 297 36 1177 123 31 0 chr20 32333177 32333372 -39820510 - L1MD2 LINE L1 -873 5486 5286 1121 138 6 0 chr20 32333373 32333532 -39820350 - AluSc SINE Alu -18 291 132 2344 92 0 7 chr20 32333532 32333835 -39820047 - AluY SINE Alu -9 302 2 3809 214 32 63 chr20 32333838 32334146 -39819736 - L1MD2 LINE L1 -850 5296 4980 1761 169 7 7 chr20 32334146 32334436 -39819446 - AluJo SINE Alu -21 291 2 3809 214 32 63 chr20 32334436 32335331 -39818551 - L1MD2 LINE L1 -1166 4980 4130 1698 180 154 66 chr20 32335332 32335403 -39818479 + L1MD2 LINE L1 5803 5866 -493 2033 124 10 0 chr20 32335403 32335693 -39818189 + AluJb SINE Alu 1 293 -19 1698 180 154 66 chr20 32335693 32336120 -39817762 + L1MD2 LINE L1 5866 6345 -14 499 277 60 24 chr20 32336148 32336397 -39817485 + MIR SINE MIR 5 262 0 199 294 35 35 chr20 32336597 32336682 -39817200 - L2 LINE L2 -2 3270 3186 2316 124 16 53 chr20 32336974 32337135 -39816747 + THE1B LTR MaLR 1 166 -198 2057 121 38 3 chr20 32337135 32337425 -39816457 + AluSx SINE Alu 3 302 -10 2194 72 3 31 chr20 32337425 32337743 -39816139 + AluY SINE Alu 1 310 0 2316 124 16 53 chr20 32337743 32337957 -39815925 + THE1B LTR MaLR 164 364 0 1658 138 4 0 chr20 32338045 32338314 -39815568 + L1MA3 LINE L1 6036 6305 0 232 178 0 0 chr20 32339219 32339264 -39814618 + A-rich Low_complexity Low_complexity 1 45 0 412 213 148 0 chr20 32339268 32339390 -39814492 + MIR SINE MIR 52 191 -71 1925 152 0 10 chr20 32339456 32339753 -39814129 + AluJb SINE Alu 1 294 -18 3264 113 23 49 chr20 32340284 32340673 -39813209 + L1MA5 LINE L1 5738 6109 -191 2304 75 30 7 chr20 32340673 32340978 -39812904 - AluSx SINE Alu 0 312 1 3264 113 23 49 chr20 32340978 32341164 -39812718 + L1MA5 LINE L1 6109 6298 -2 1073 250 35 41 chr20 32341208 32341767 -39812115 - MER115 DNA AcHobo 0 693 73 392 244 82 0 chr20 32342194 32342329 -39811553 - MIR SINE MIR -55 207 62 239 234 39 13 chr20 32342330 32342407 -39811475 + (TGAA)n Simple_repeat Simple_repeat 3 81 0 270 206 29 15 chr20 32343661 32343688 -39810194 + (CCCCAG)n Simple_repeat Simple_repeat 1 26 -168 218 31 0 31 chr20 32343688 32343720 -39810162 + (CTAAT)n Simple_repeat Simple_repeat 1 31 0 270 206 29 15 chr20 32343720 32343853 -39810029 + (CCCCAG)n Simple_repeat Simple_repeat 26 194 0 22 94 0 0 chr20 32344897 32344961 -39808921 + AT_rich Low_complexity Low_complexity 1 64 0 2162 103 40 13 chr20 32344963 32345264 -39808618 + AluSg SINE Alu 1 309 -1 451 323 52 10 chr20 32345362 32345653 -39808229 + L2 LINE L2 2900 3202 -111 1167 252 58 60 chr20 32345711 32346011 -39807871 - MLT1J LTR MaLR -20 470 193 1861 130 7 46 chr20 32346011 32346318 -39807564 + AluSx SINE Alu 1 295 -17 1167 252 58 60 chr20 32346318 32346511 -39807371 - MLT1J LTR MaLR -297 193 1 30 0 0 0 chr20 32346517 32346547 -39807335 + AT_rich Low_complexity Low_complexity 1 30 0 980 173 40 35 chr20 32346653 32346855 -39807027 + AluJo SINE Alu 22 224 -88 552 303 98 52 chr20 32346871 32347238 -39806644 + LTR67 LTR ERVL 114 497 -60 375 226 219 0 chr20 32347260 32347406 -39806476 + MIR SINE MIR 85 262 0 626 180 63 79 chr20 32348057 32348088 -39805794 + MIR SINE MIR 77 107 -155 1980 153 3 3 chr20 32348088 32348383 -39805499 + AluSx SINE Alu 1 295 -17 626 180 63 79 chr20 32348383 32348540 -39805342 + MIR SINE MIR 107 262 0 266 290 19 25 chr20 32348754 32348916 -39804966 + (TATATG)n Simple_repeat Simple_repeat 4 164 0 351 44 0 0 chr20 32350166 32350211 -39803671 + (TG)n Simple_repeat Simple_repeat 1 45 0 2431 100 0 3 chr20 32350226 32350537 -39803345 - AluSq SINE Alu -3 310 1 2175 48 4 11 chr20 32350877 32351149 -39802733 - L1PA8 LINE L1 -3 6169 5900 225 0 0 0 chr20 32351254 32351279 -39802603 + (CA)n Simple_repeat Simple_repeat 1 25 0 2217 109 0 7 chr20 32351545 32351847 -39802035 - AluSx SINE Alu -12 300 1 1884 148 0 21 chr20 32351917 32352107 -39801775 - AluSx SINE Alu 0 323 140 2455 82 16 0 chr20 32352107 32352411 -39801471 - AluSg SINE Alu -1 309 1 1884 148 0 21 chr20 32352411 32352544 -39801338 - AluSx SINE Alu -183 140 6 23 0 0 0 chr20 32352644 32352667 -39801215 + AT_rich Low_complexity Low_complexity 1 23 0 296 288 91 23 chr20 32352792 32352924 -39800958 - L2 LINE L2 -2 3311 3171 465 200 0 0 chr20 32353040 32353125 -39800757 + MER96 DNA MER1_type? 91 175 0 270 273 249 36 chr20 32353314 32353651 -39800231 + LTR67 LTR ERVL 99 507 -50 2244 122 0 3 chr20 32354054 32354365 -39799517 - AluSx SINE Alu -2 310 1 2293 293 136 46 chr20 32354838 32356807 -39797075 - L2 LINE L2 0 3313 1116 1691 163 13 43 chr20 32356807 32357108 -39796774 + AluJo SINE Alu 1 292 -20 2293 293 136 46 chr20 32357108 32357283 -39796599 - L2 LINE L2 -2197 1116 958 581 317 25 9 chr20 32357439 32357667 -39796215 - MIR SINE MIR -11 251 21 1027 185 35 10 chr20 32358260 32358460 -39795422 - MER3 DNA MER1_type -4 205 1 294 29 0 0 chr20 32358615 32358650 -39795232 + (CA)n Simple_repeat Simple_repeat 2 36 0 980 187 12 0 chr20 32360665 32360836 -39793046 - FRAM SINE Alu -4 172 1 708 290 64 40 chr20 32360855 32360866 -39793016 + MLT1H LTR MaLR 3 12 -537 2014 95 0 11 chr20 32360866 32361139 -39792743 + AluY SINE Alu 30 299 -12 708 290 64 40 chr20 32361139 32361424 -39792458 + MLT1H LTR MaLR 12 306 -243 394 192 0 13 chr20 32361499 32361577 -39792305 + MLT1H LTR MaLR 473 549 0 2334 107 0 3 chr20 32361642 32361950 -39791932 - AluSx SINE Alu -5 307 1 1479 186 16 29 chr20 32362033 32362345 -39791537 + AluJo SINE Alu 1 308 -4 1057 171 92 13 chr20 32362385 32362613 -39791269 - MER58B DNA MER1_type -13 328 83 2222 125 0 0 chr20 32362615 32362910 -39790972 + AluSq SINE Alu 1 295 -18 414 171 0 95 chr20 32362914 32363019 -39790863 + FLAM_C SINE Alu 47 141 -2 1963 182 126 51 chr20 32363040 32363330 -39790552 + L1ME1 LINE L1 5552 5819 -515 2297 101 0 19 chr20 32363330 32363638 -39790244 + AluSq SINE Alu 1 302 -11 1963 182 126 51 chr20 32363638 32363936 -39789946 + L1ME1 LINE L1 5819 6334 0 2042 140 4 3 chr20 32364013 32364348 -39789534 + L1PA16 LINE L1 5775 6112 -56 330 26 0 0 chr20 32364695 32364734 -39789148 + (GA)n Simple_repeat Simple_repeat 1 39 0 862 277 11 9 chr20 32366213 32366474 -39787408 + MIR SINE MIR 3 262 0 1042 274 40 37 chr20 32367291 32367667 -39786215 - MLT1I LTR MaLR -4 405 29 762 133 23 0 chr20 32367669 32367797 -39786085 + L1MB1 LINE L1 5477 5607 -561 2165 130 10 0 chr20 32367797 32368105 -39785777 + AluSp SINE Alu 1 311 -2 349 71 48 48 chr20 32368108 32368192 -39785690 + GA-rich Low_complexity Low_complexity 4 87 0 2897 164 18 36 chr20 32368196 32368640 -39785242 + L1MB1 LINE L1 5616 6049 -119 1914 118 3 64 chr20 32368640 32368954 -39784928 + AluJo SINE Alu 1 295 -17 2897 164 18 36 chr20 32368954 32369071 -39784811 + L1MB1 LINE L1 6049 6167 -1 2207 114 0 0 chr20 32369119 32369416 -39784466 - AluSx SINE Alu -10 302 6 21 0 0 0 chr20 32369513 32369534 -39784348 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 32369926 32369949 -39783933 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2182 117 0 0 chr20 32369951 32370232 -39783650 - AluSx SINE Alu -31 281 1 684 326 92 6 chr20 32370395 32370742 -39783140 - L3 LINE CR1 -11 1566 1190 2108 142 3 0 chr20 32370935 32371238 -39782644 + AluSx SINE Alu 1 304 -8 1057 210 50 86 chr20 32371247 32371552 -39782330 + HAL1 LINE L1 1092 1407 -1100 2326 111 0 0 chr20 32371552 32371850 -39782032 + AluSq SINE Alu 1 298 -15 2929 6 0 0 chr20 32371850 32372161 -39781721 + AluYa5 SINE Alu 1 311 0 1057 210 50 86 chr20 32372161 32372296 -39781586 + HAL1 LINE L1 1405 1517 -990 1439 182 141 23 chr20 32372303 32372650 -39781232 + MER66A LTR ERV1 27 414 -64 959 272 160 13 chr20 32372671 32373064 -39780818 + HAL1 LINE L1 1514 1964 -543 553 190 37 163 chr20 32373071 32373366 -39780516 + HAL1 LINE L1 2246 2503 -4 1491 164 45 42 chr20 32373465 32373777 -39780105 + THE1C LTR MaLR 63 375 0 2597 164 9 2 chr20 32373777 32374222 -39779660 + L1MA9 LINE L1 5639 6086 -226 1286 152 56 128 chr20 32374233 32374607 -39779275 - MLT1A1 LTR MaLR -12 353 7 1482 111 12 25 chr20 32374607 32374850 -39779032 + L1MA9 LINE L1 6073 6312 0 1648 171 58 0 chr20 32374899 32375192 -39778690 + AluJo SINE Alu 3 312 0 1413 235 41 78 chr20 32376157 32376812 -39777070 + L1MC5 LINE L1 6572 7146 -815 338 293 20 33 chr20 32376812 32376962 -39776920 + L2 LINE L2 2966 3113 -200 338 238 172 16 chr20 32376958 32377008 -39776874 + L2 LINE L2 3173 3214 -99 195 100 0 0 chr20 32377008 32377038 -39776844 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 338 238 172 16 chr20 32377038 32377109 -39776773 + L2 LINE L2 3214 3313 0 204 330 36 18 chr20 32377435 32377547 -39776335 - MIR SINE MIR -110 152 39 284 277 43 35 chr20 32378020 32378161 -39775721 + L2 LINE L2 2677 2818 -496 442 275 58 0 chr20 32378400 32378538 -39775344 + MIR3 SINE MIR 59 204 -4 9561 22 0 249 chr20 32380138 32381983 -39771899 + SVA Other Other 1 1386 0 28 79 0 0 chr20 32382441 32382504 -39771378 + AT_rich Low_complexity Low_complexity 1 63 0 1979 169 47 38 chr20 32382518 32382761 -39771121 - MLT1C LTR MaLR -36 431 181 2314 119 0 0 chr20 32382761 32383071 -39770811 - AluSx SINE Alu -2 310 1 1979 169 47 38 chr20 32383071 32383254 -39770628 - MLT1C LTR MaLR -286 181 1 451 181 11 0 chr20 32383268 32383362 -39770520 - L1M LINE L1 -2396 5412 5318 1089 235 50 62 chr20 32383369 32383871 -39770011 - HAL1 LINE L1 -1220 1287 792 1730 270 102 63 chr20 32383880 32383948 -39769934 - HAL1 LINE L1 -1596 911 847 1820 150 39 7 chr20 32383948 32384261 -39769621 - AluSx SINE Alu 0 312 1 1730 270 102 63 chr20 32384261 32385069 -39768813 - HAL1 LINE L1 -1660 847 1 2289 87 0 10 chr20 32385128 32385417 -39768465 + AluSx SINE Alu 1 286 -26 194 0 0 37 chr20 32385417 32385444 -39768438 + (TTAAA)n Simple_repeat Simple_repeat 2 27 0 591 320 54 0 chr20 32385485 32385744 -39768138 - L1M4 LINE L1 -2275 3871 3599 23 0 0 0 chr20 32385880 32385903 -39767979 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr20 32386061 32386089 -39767793 + AT_rich Low_complexity Low_complexity 1 28 0 766 318 0 5 chr20 32386137 32386360 -39767522 + L1MEc LINE L1 36 257 -6139 1296 220 104 64 chr20 32386755 32387123 -39766759 + MLT1E LTR MaLR 1 388 -205 2600 58 3 0 chr20 32387123 32387432 -39766450 + AluY SINE Alu 1 310 -1 1296 220 104 64 chr20 32387432 32387468 -39766414 + MLT1E LTR MaLR 388 421 -172 2222 87 4 0 chr20 32387957 32388234 -39765648 + AluSp SINE Alu 1 278 -35 234 0 0 0 chr20 32388238 32388264 -39765618 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2103 98 11 11 chr20 32388345 32388631 -39765251 + AluSx SINE Alu 6 291 -21 365 325 71 35 chr20 32389043 32389240 -39764642 - MLT1J LTR MaLR -177 334 131 371 266 58 36 chr20 32389243 32389382 -39764500 + L2 LINE L2 2184 2325 -989 1211 224 133 85 chr20 32389386 32389415 -39764467 + MLT1G LTR MaLR 1 27 -563 2179 118 3 0 chr20 32389415 32389711 -39764171 + AluSx SINE Alu 1 297 -15 1211 224 133 85 chr20 32389711 32390079 -39763803 + MLT1G LTR MaLR 27 452 -138 363 302 74 30 chr20 32390167 32390369 -39763513 - MIR SINE MIR -37 225 15 731 295 24 8 chr20 32390428 32390679 -39763203 - L2 LINE L2 -255 3058 2804 1933 117 3 54 chr20 32390789 32391087 -39762795 + AluSx SINE Alu 6 288 -24 36 0 0 0 chr20 32391087 32391123 -39762759 + AT_rich Low_complexity Low_complexity 1 36 0 354 327 0 9 chr20 32391173 32391280 -39762602 - MLT1K LTR MaLR -465 123 18 292 259 76 118 chr20 32391295 32391466 -39762416 - L1ME LINE L1 -479 5642 5465 1852 121 0 71 chr20 32391466 32391597 -39762285 + AluSx SINE Alu 7 107 -205 2321 112 0 0 chr20 32391597 32391900 -39761982 - AluSx SINE Alu -9 303 1 1852 121 0 71 chr20 32391900 32392065 -39761817 + AluSx SINE Alu 107 282 -30 189 0 0 0 chr20 32392071 32392092 -39761790 + (TA)n Simple_repeat Simple_repeat 2 22 0 292 259 76 118 chr20 32392092 32392175 -39761707 - L1ME LINE L1 -661 5460 5392 276 284 73 46 chr20 32392657 32392766 -39761116 - MIR3 SINE MIR -47 161 50 237 146 0 18 chr20 32392882 32392937 -39760945 + Alu SINE Alu 249 302 0 198 0 0 0 chr20 32393189 32393211 -39760671 + (TTG)n Simple_repeat Simple_repeat 2 23 0 388 250 56 56 chr20 32393273 32393342 -39760540 - LTR50 LTR ERVL -151 644 576 2241 99 17 0 chr20 32393342 32393635 -39760247 - AluSx SINE Alu -14 298 1 388 250 56 56 chr20 32393635 32393709 -39760173 - LTR50 LTR ERVL -218 577 501 385 265 118 70 chr20 32394695 32395050 -39758832 - L2 LINE L2 -35 3237 2866 190 358 37 0 chr20 32395351 32395460 -39758422 + MIR SINE MIR 39 151 -111 690 285 76 50 chr20 32395897 32396140 -39757742 - L2 LINE L2 -5 3308 3050 2013 135 3 26 chr20 32396140 32396451 -39757431 - AluSx SINE Alu -8 304 1 690 285 76 50 chr20 32396451 32396589 -39757293 - L2 LINE L2 -263 3050 2917 206 304 88 20 chr20 32397899 32398001 -39755881 + L2 LINE L2 3110 3218 -54 351 266 60 49 chr20 32398268 32398452 -39755430 - L1ME3A LINE L1 -43 6127 5942 1684 231 34 92 chr20 32398515 32399083 -39754799 - L1MC5 LINE L1 -431 7530 7015 2280 103 3 3 chr20 32399083 32399384 -39754498 - AluSx SINE Alu -11 301 1 1684 231 34 92 chr20 32399384 32399573 -39754309 - L1MC5 LINE L1 -946 7015 6817 1606 237 37 51 chr20 32399587 32400077 -39753805 - LTR65 LTR ERV1 -20 649 167 334 233 0 35 chr20 32400105 32400191 -39753691 - L1MC5 LINE L1 -1120 6841 6759 * 785 214 59 32 chr20 32400190 32400410 -39753472 - L1MEc LINE L1 -4329 2067 1842 743 111 0 0 chr20 32400412 32400520 -39753362 + AluY SINE Alu 204 311 0 2479 74 7 0 chr20 32400524 32400833 -39753049 + AluSp SINE Alu 1 311 -2 2910 266 55 44 chr20 32400833 32401160 -39752722 - L1MEc LINE L1 -4546 1850 1528 1908 139 34 7 chr20 32401160 32401324 -39752558 - AluJb SINE Alu -10 302 125 2616 59 0 0 chr20 32401324 32401629 -39752253 - AluY SINE Alu -6 305 1 1908 139 34 7 chr20 32401629 32401758 -39752124 - AluJb SINE Alu -187 125 1 2910 266 55 44 chr20 32401758 32402259 -39751623 - L1MEc LINE L1 -4868 1528 1034 2272 90 0 51 chr20 32402259 32402571 -39751311 - AluSp SINE Alu -17 296 1 2910 266 55 44 chr20 32402571 32403136 -39750746 - L1MEc LINE L1 -5362 1034 442 903 181 12 12 chr20 32403165 32403336 -39750546 + AluSg/x SINE Alu 135 305 -5 1720 232 40 34 chr20 32403820 32403898 -39749984 + Charlie1 DNA MER1_type 24 100 -2661 1948 70 0 74 chr20 32403898 32404069 -39749813 - AluY SINE Alu -9 302 159 414 0 0 0 chr20 32404069 32404115 -39749767 + (TA)n Simple_repeat Simple_repeat 2 47 0 1948 70 0 74 chr20 32404115 32404228 -39749654 - AluY SINE Alu -152 159 39 1720 232 40 34 chr20 32404228 32404593 -39749289 + Charlie1 DNA MER1_type 100 470 -2291 664 153 127 0 chr20 32404596 32404714 -39749168 - AluJo SINE Alu -175 137 5 543 261 42 61 chr20 32404753 32404941 -39748941 + L1MCc LINE L1 1226 1407 -5016 2497 120 57 47 chr20 32404941 32405284 -39748598 + MSTA LTR MaLR 1 350 -78 2283 105 0 3 chr20 32405284 32405580 -39748302 - AluSx SINE Alu -17 295 1 2497 120 57 47 chr20 32405580 32405660 -39748222 + MSTA LTR MaLR 350 428 0 543 261 42 61 chr20 32405660 32405781 -39748101 + L1MCc LINE L1 1407 1529 -4894 341 209 2 20 chr20 32405788 32405877 -39748005 - MLT1H LTR MaLR 0 567 462 265 213 0 0 chr20 32406002 32406049 -39747833 - AluY SINE Alu -252 47 1 298 215 13 63 chr20 32406230 32406309 -39747573 - MLT1F LTR MaLR -439 103 29 1116 150 0 17 chr20 32406385 32406558 -39747324 + FAM SINE Alu 1 170 -5 487 265 42 32 chr20 32406561 32406750 -39747132 + L1MCc LINE L1 1760 1950 -4981 736 186 0 0 chr20 32406758 32406876 -39747006 + AluJo/FLAM SINE Alu 1 118 -184 654 175 75 8 chr20 32406876 32406996 -39746886 - AluJo/FLAM SINE Alu -170 132 5 426 200 29 102 chr20 32407018 32407163 -39746719 + L1MCc LINE L1 1981 2108 -5014 2160 112 10 3 chr20 32407163 32407468 -39746414 + AluSx SINE Alu 2 308 -4 426 200 29 102 chr20 32407468 32407527 -39746355 + L1MCc LINE L1 2108 2170 -4952 1010 63 0 0 chr20 32407530 32407657 -39746225 + AluY SINE Alu 172 298 -13 403 280 16 11 chr20 32407666 32407855 -39746027 + L1M4 LINE L1 4409 4598 -1548 2284 66 0 87 chr20 32408378 32408710 -39745172 - AluY SINE Alu -8 303 1 1727 174 3 11 chr20 32408859 32409141 -39744741 - AluJb SINE Alu -22 290 11 669 224 20 0 chr20 32409146 32409298 -39744584 - L1MA10 LINE L1 -10 6324 6170 2162 96 43 10 chr20 32409315 32409618 -39744264 - AluSq SINE Alu 0 313 1 880 288 30 43 chr20 32409623 32409898 -39743984 + L2 LINE L2 2820 3090 -223 2572 52 0 3 chr20 32409898 32410203 -39743679 + AluY SINE Alu 1 304 -7 880 288 30 43 chr20 32410203 32410299 -39743583 + L2 LINE L2 3090 3186 -127 180 182 0 0 chr20 32410400 32410444 -39743438 + (TA)n Simple_repeat Simple_repeat 2 45 0 326 230 27 0 chr20 32410529 32410603 -39743279 + LTR33A LTR ERVL 448 523 0 231 206 59 15 chr20 32410687 32410755 -39743127 - L2 LINE L2 0 3272 3202 243 0 0 0 chr20 32410871 32410898 -39742984 + (TCCCC)n Simple_repeat Simple_repeat 2 28 0 390 250 57 57 chr20 32410899 32411039 -39742843 - LTR50 LTR ERVL -628 167 28 1018 155 0 7 chr20 32411205 32411360 -39742522 - AluJo SINE Alu -81 231 78 1834 157 0 43 chr20 32411490 32411815 -39742067 + AluJo SINE Alu 1 311 -1 728 120 64 0 chr20 32411823 32411948 -39741934 + L1MA5 LINE L1 6151 6283 -17 24 0 0 0 chr20 32411955 32411979 -39741903 + AT_rich Low_complexity Low_complexity 1 24 0 721 225 0 0 chr20 32411979 32412169 -39741713 + FLAM_A SINE Alu 1 190 0 1753 153 73 0 chr20 32412660 32412935 -39740947 - AluJb SINE Alu -17 295 1 516 235 10 0 chr20 32413529 32413631 -39740251 + L2 LINE L2 3191 3293 -20 1038 183 36 40 chr20 32413631 32413882 -39740000 + Tigger8 DNA MER2_type 261 510 -156 2205 90 3 0 chr20 32413883 32414183 -39739699 + AluSx SINE Alu 1 301 -11 2202 204 88 13 chr20 32414436 32414716 -39739166 - L1ME2 LINE L1 -213 5951 5694 304 28 0 0 chr20 32414716 32414752 -39739130 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 2033 117 3 11 chr20 32414752 32415035 -39738847 - AluSx SINE Alu -1 316 1 2202 204 88 13 chr20 32415035 32415422 -39738460 - L1ME2 LINE L1 -469 5695 5224 192 97 0 0 chr20 32415999 32416030 -39737852 + (TA)n Simple_repeat Simple_repeat 2 32 0 2522 91 3 0 chr20 32416115 32416444 -39737438 - AluSx SINE Alu 0 330 1 2514 84 3 0 chr20 32416669 32416980 -39736902 - AluSx SINE Alu 0 312 1 314 218 82 9 chr20 32416986 32417096 -39736786 + L1ME4a LINE L1 6004 6121 0 2079 134 7 0 chr20 32417136 32417419 -39736463 + AluJo SINE Alu 6 290 -22 235 279 13 38 chr20 32417463 32417542 -39736340 + MIR SINE MIR 56 132 -130 618 151 57 0 chr20 32417559 32417665 -39736217 + AluJo SINE Alu 2 113 -199 181 0 69 0 chr20 32417669 32417698 -39736184 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 917 159 35 75 chr20 32417705 32417906 -39735976 + AluJo SINE Alu 100 292 -20 504 105 0 0 chr20 32417919 32417995 -39735887 + (GGAA)n Simple_repeat Simple_repeat 4 79 0 241 258 103 0 chr20 32418138 32418235 -39735647 - L3 LINE CR1 -50 1527 1421 251 299 23 11 chr20 32418272 32418359 -39735523 + MIR SINE MIR 52 139 -69 336 277 79 0 chr20 32418775 32418876 -39735006 - MIR SINE MIR -103 159 51 2246 117 0 0 chr20 32419418 32419717 -39734165 + AluSx SINE Alu 1 299 -13 453 230 0 174 chr20 32419764 32419861 -39734021 - MIR SINE MIR -79 183 135 2229 110 0 0 chr20 32419861 32420151 -39733731 + AluSx SINE Alu 1 290 -22 453 230 0 174 chr20 32420151 32420249 -39733633 - MIR SINE MIR -127 135 22 317 250 31 10 chr20 32420434 32420530 -39733352 - L2 LINE L2 -58 3255 3158 367 227 357 27 chr20 32420931 32421116 -39732766 + MIR SINE MIR 4 249 -13 271 293 12 0 chr20 32421198 32421280 -39732602 - MIR SINE MIR -93 115 33 1970 169 0 3 chr20 32421302 32421597 -39732285 - AluJo SINE Alu -18 294 1 553 261 113 20 chr20 32421670 32421873 -39732009 + L2 LINE L2 2804 3025 -288 385 206 83 67 chr20 32421878 32422008 -39731874 + L1MC5 LINE L1 7734 7869 -92 2551 71 0 3 chr20 32422008 32422318 -39731564 - AluSc SINE Alu 0 309 1 385 206 83 67 chr20 32422318 32422367 -39731515 + L1MC5 LINE L1 7869 7916 -45 849 133 8 0 chr20 32422386 32422506 -39731376 + AluJo SINE Alu 14 134 -178 2185 118 27 0 chr20 32422684 32422981 -39730901 + AluSq SINE Alu 1 305 -8 6826 69 12 42 chr20 32422989 32423972 -39729910 - SVA Other Other 0 1386 433 944 109 32 106 chr20 32423989 32424716 -39729166 - SVA Other Other -520 866 519 1267 49 8 65 chr20 32424744 32424990 -39728892 - SVA Other Other -520 866 635 6093 55 19 52 chr20 32425023 32425997 -39727885 - SVA Other Other -520 866 1 377 277 30 60 chr20 32426235 32426401 -39727481 - MIR SINE MIR -58 204 44 207 162 0 0 chr20 32426451 32426488 -39727394 + (CA)n Simple_repeat Simple_repeat 1 37 0 371 212 30 10 chr20 32426878 32426977 -39726905 + MIR SINE MIR 44 144 -64 185 188 0 200 chr20 32427026 32427109 -39726773 + MIR SINE MIR 133 198 -64 436 194 41 10 chr20 32427109 32427207 -39726675 + MER5A DNA MER1_type 1 101 -88 413 180 10 16 chr20 32427351 32427441 -39726441 + MER5A DNA MER1_type 86 189 0 226 229 0 0 chr20 32427441 32427487 -39726395 + MIR SINE MIR 191 236 -26 424 206 40 56 chr20 32427688 32427814 -39726068 - MIR3 SINE MIR -52 156 33 451 285 44 25 chr20 32428370 32428528 -39725354 + MER5A DNA MER1_type 1 161 -28 541 192 31 62 chr20 32430393 32430523 -39723359 - MER91C DNA MER1_type 0 140 15 263 269 13 13 chr20 32431025 32431103 -39722779 - MIR SINE MIR -69 139 62 298 119 90 30 chr20 32431146 32431213 -39722669 - L2 LINE L2 -1 3312 3242 406 331 6 6 chr20 32431758 32431915 -39721967 + MIR SINE MIR 20 176 -86 235 317 19 10 chr20 32432246 32432350 -39721532 - MIR SINE MIR -110 152 48 2526 88 0 0 chr20 32432372 32432678 -39721204 - AluSq SINE Alu -7 306 1 386 303 101 0 chr20 32432790 32432909 -39720973 - L2 LINE L2 0 3272 3142 183 352 117 23 chr20 32433007 32433135 -39720747 + MIR3 SINE MIR 19 158 -50 2414 106 3 0 chr20 32433351 32433662 -39720220 + AluSp SINE Alu 1 312 -1 253 128 0 0 chr20 32433696 32433735 -39720147 + Alu SINE Alu 251 289 -12 316 348 0 22 chr20 32433735 32433824 -39720058 + L1MC4 LINE L1 6617 6703 -1339 2382 107 3 0 chr20 32433857 32434166 -39719716 - AluSx SINE Alu -2 310 1 210 266 62 16 chr20 32434293 32434357 -39719525 - MIR3 SINE MIR -49 159 93 2246 118 3 3 chr20 32434534 32434840 -39719042 + AluSx SINE Alu 1 306 -6 203 286 44 11 chr20 32434843 32434934 -39718948 + L2 LINE L2 2883 2976 -337 188 259 130 0 chr20 32435103 32435157 -39718725 + L2 LINE L2 3141 3201 -71 303 301 48 0 chr20 32435596 32435699 -39718183 - MIR SINE MIR -89 173 66 861 144 0 15 chr20 32436398 32436530 -39717352 + AluJo SINE Alu 5 134 -178 2196 132 0 0 chr20 32436561 32436856 -39717026 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 32437318 32437338 -39716544 + (A)n Simple_repeat Simple_repeat 1 20 0 585 209 30 8 chr20 32437340 32437474 -39716408 + MER5A DNA MER1_type 32 168 -21 367 289 32 19 chr20 32438614 32438770 -39715112 - MIR SINE MIR -72 190 33 265 260 94 10 chr20 32438910 32439006 -39714876 - MIR3 SINE MIR -27 181 78 465 209 46 39 chr20 32439682 32439835 -39714047 - L2 LINE L2 -1 3312 3159 240 204 31 112 chr20 32439836 32439934 -39713948 - MIR3 SINE MIR 0 208 119 624 14 0 0 chr20 32439936 32440009 -39713873 + (GA)n Simple_repeat Simple_repeat 1 73 0 498 306 20 0 chr20 32440220 32440367 -39713515 + MIR SINE MIR 107 256 -6 1695 164 0 29 chr20 32440404 32440684 -39713198 - AluJb SINE Alu -31 281 10 592 216 96 6 chr20 32440768 32440935 -39712947 + L2 LINE L2 3132 3313 0 299 318 73 47 chr20 32441124 32441316 -39712566 - MIR SINE MIR 0 262 66 206 280 0 0 chr20 32441353 32441403 -39712479 - MIR SINE MIR -67 141 92 635 225 62 70 chr20 32441416 32441643 -39712239 - MIR SINE MIR -2 260 36 186 43 0 0 chr20 32442627 32442650 -39711232 + (TG)n Simple_repeat Simple_repeat 2 24 0 233 301 206 15 chr20 32442691 32442827 -39711055 + MIR SINE MIR 12 173 -89 520 201 52 81 chr20 32442859 32442941 -39710941 + MIR SINE MIR 81 164 -98 2224 110 3 10 chr20 32442941 32443242 -39710640 + AluSx SINE Alu 1 299 -13 520 201 52 81 chr20 32443242 32443333 -39710549 + MIR SINE MIR 164 249 -13 425 251 139 14 chr20 32443414 32443637 -39710245 - L1ME3A LINE L1 -255 5915 5665 377 294 47 14 chr20 32443646 32443882 -39710000 - MLT1L LTR MaLR -164 451 181 1754 134 0 34 chr20 32444118 32444386 -39709496 + AluSx SINE Alu 36 294 -18 562 226 44 109 chr20 32444461 32444709 -39709173 - MER102b DNA MER1_type 0 341 110 1831 153 7 17 chr20 32444711 32445005 -39708877 - AluJb SINE Alu -21 291 1 2471 92 0 3 chr20 32445009 32445315 -39708567 - AluSp SINE Alu -8 305 1 1312 125 0 5 chr20 32445354 32445531 -39708351 - AluSg/x SINE Alu -1 311 134 2450 66 0 26 chr20 32445531 32445836 -39708046 - AluY SINE Alu -14 297 1 1312 125 0 5 chr20 32445836 32445850 -39708032 - AluSg/x SINE Alu -178 134 121 2331 107 7 3 chr20 32445867 32446176 -39707706 + AluSx SINE Alu 3 312 0 1790 167 4 0 chr20 32446197 32446503 -39707379 + AluJb SINE Alu 1 307 0 654 270 150 50 chr20 32446908 32446981 -39706901 + MLT1L LTR MaLR 220 284 -331 198 0 0 0 chr20 32446981 32447003 -39706879 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 654 270 150 50 chr20 32447003 32447229 -39706653 + MLT1L LTR MaLR 284 549 -66 2389 101 0 0 chr20 32447241 32447537 -39706345 + AluSx SINE Alu 1 296 -16 1205 233 131 50 chr20 32447655 32447984 -39705898 - MLT1J LTR MaLR -38 473 101 2249 120 3 0 chr20 32447984 32448000 -39705882 - AluSx SINE Alu -3 309 295 180 77 0 0 chr20 32448000 32448026 -39705856 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 2249 120 3 0 chr20 32448026 32448317 -39705565 - AluSx SINE Alu -17 295 1 1205 233 131 50 chr20 32448317 32448408 -39705474 - MLT1J LTR MaLR -410 101 19 1772 203 176 7 chr20 32448545 32449108 -39704774 - L1M4 LINE L1 -3006 3140 2483 440 301 148 51 chr20 32449116 32449508 -39704374 - L1ME LINE L1 -302 5819 5390 557 279 59 36 chr20 32449719 32449941 -39703941 + MIR SINE MIR 21 247 -15 558 264 106 19 chr20 32449954 32450162 -39703720 - MIR SINE MIR -2 260 35 203 239 0 0 chr20 32450191 32450237 -39703645 - MIR SINE MIR -63 145 100 530 233 100 7 chr20 32451280 32451430 -39702452 - MIR3 SINE MIR -9 199 36 199 250 181 0 chr20 32451713 32451785 -39702097 - MIR SINE MIR -89 119 35 204 299 30 0 chr20 32452205 32452272 -39701610 + MIR SINE MIR 82 150 -58 207 270 0 0 chr20 32452434 32452497 -39701385 - L2 LINE L2 -300 2972 2910 658 154 0 0 chr20 32452549 32452675 -39701207 + FLAM_C SINE Alu 21 146 0 555 261 57 11 chr20 32453019 32453195 -39700687 + MIR SINE MIR 79 262 0 416 268 22 80 chr20 32453202 32453340 -39700542 - L2 LINE L2 -21 3251 3122 2248 127 0 0 chr20 32453362 32453669 -39700213 + AluSx SINE Alu 1 307 -5 273 235 143 10 chr20 32454163 32454261 -39699621 - MER102a DNA MER1_type -6 324 214 551 193 67 25 chr20 32454265 32454384 -39699498 + FLAM_C SINE Alu 2 125 -18 721 274 94 17 chr20 32454446 32454596 -39699286 + MIR SINE MIR 3 179 -83 2287 102 0 13 chr20 32454596 32454732 -39699150 + AluSx SINE Alu 1 137 -175 2413 82 0 3 chr20 32454732 32455024 -39698858 + AluY SINE Alu 1 291 -20 2287 102 0 13 chr20 32455024 32455190 -39698692 + AluSx SINE Alu 137 299 -13 721 274 94 17 chr20 32455190 32455273 -39698609 + MIR SINE MIR 179 254 -8 326 314 5 77 chr20 32455285 32455401 -39698481 - MER102a DNA MER1_type -149 192 95 1629 192 0 24 chr20 32455401 32455728 -39698154 - AluJo SINE Alu 0 320 1 326 314 5 77 chr20 32455728 32455817 -39698065 - MER102a DNA MER1_type -246 95 1 1749 131 4 0 chr20 32456065 32456309 -39697573 + AluJo SINE Alu 1 245 -67 35 0 0 0 chr20 32456352 32456387 -39697495 + AT_rich Low_complexity Low_complexity 1 35 0 2070 82 99 14 chr20 32456915 32457197 -39696685 + AluSx SINE Alu 7 312 0 312 297 85 68 chr20 32457240 32457533 -39696349 + L2 LINE L2 2395 2692 -622 1706 130 49 52 chr20 32457807 32458114 -39695768 - AluJo SINE Alu -6 306 1 2494 79 0 3 chr20 32458396 32458700 -39695182 - AluSq SINE Alu -10 303 1 3487 116 4 2 chr20 32459571 32460090 -39693792 + MER41B LTR ERV1 1 520 -115 2199 97 28 0 chr20 32460092 32460380 -39693502 - AluSg SINE Alu -14 296 1 284 246 15 0 chr20 32460477 32460542 -39693340 + MLT1J LTR MaLR 3 68 -443 2314 110 10 13 chr20 32460558 32460731 -39693151 - AluSx SINE Alu -3 309 136 2581 73 0 9 chr20 32460731 32461046 -39692836 - AluSp SINE Alu -1 312 1 2314 110 10 13 chr20 32461046 32461181 -39692701 - AluSx SINE Alu -176 136 2 25 31 0 0 chr20 32461191 32461223 -39692659 + AT_rich Low_complexity Low_complexity 1 32 0 1012 273 19 72 chr20 32461293 32461626 -39692256 + MLT1J LTR MaLR 115 423 -88 2170 120 3 0 chr20 32461626 32461917 -39691965 - AluSx SINE Alu -20 292 1 1012 273 19 72 chr20 32461917 32462000 -39691882 + MLT1J LTR MaLR 423 509 -2 1993 223 44 2 chr20 32462003 32462416 -39691466 - MLT1G LTR MaLR 0 590 161 2301 98 7 0 chr20 32462850 32463155 -39690727 + AluSx SINE Alu 1 307 -5 2426 63 0 30 chr20 32463306 32463605 -39690277 + AluY SINE Alu 1 290 -21 2272 116 0 0 chr20 32463622 32463916 -39689966 + AluSg SINE Alu 1 294 -16 1981 166 3 0 chr20 32464094 32464384 -39689498 + AluJb SINE Alu 1 291 -21 768 147 16 0 chr20 32464965 32465094 -39688788 - FLAM_C SINE Alu -2 131 1 2340 91 7 0 chr20 32465308 32465605 -39688277 + AluSp SINE Alu 1 299 -14 2406 64 0 0 chr20 32465753 32466036 -39687846 + AluY SINE Alu 1 320 0 219 54 0 27 chr20 32466036 32466073 -39687809 + (TAAAA)n Simple_repeat Simple_repeat 2 180 0 1933 144 0 4 chr20 32466089 32466394 -39687488 + AluJb SINE Alu 9 312 0 848 142 8 0 chr20 32466479 32466599 -39687283 + AluJb SINE Alu 9 129 -183 199 178 67 0 chr20 32466710 32466755 -39687127 + MIR SINE MIR 202 249 -13 * 215 61 61 0 chr20 32466725 32466758 -39687124 + L2 LINE L2 3265 3299 -14 2471 63 33 0 chr20 32466865 32467165 -39686717 - AluY SINE Alu -1 310 1 2563 67 0 3 chr20 32467165 32467478 -39686404 - AluSq SINE Alu -1 312 1 482 194 31 148 chr20 32467478 32467674 -39686208 + L2 LINE L2 3140 3312 -1 234 174 0 0 chr20 32467912 32467958 -39685924 + (CGTG)n Simple_repeat Simple_repeat 3 48 0 312 234 78 70 chr20 32470405 32470533 -39683349 - MIR SINE MIR -74 188 60 306 308 75 15 chr20 32470969 32471102 -39682780 - L2 LINE L2 -10 3262 3122 22 0 0 0 chr20 32471526 32471548 -39682334 + AT_rich Low_complexity Low_complexity 1 22 0 2434 81 3 0 chr20 32471581 32471877 -39682005 - AluSp SINE Alu -15 298 2 2306 106 0 3 chr20 32471906 32472209 -39681673 + AluSx SINE Alu 1 302 -10 894 159 97 0 chr20 32472248 32472393 -39681489 + FRAM SINE Alu 1 152 -24 2198 125 3 0 chr20 32472641 32472944 -39680938 - AluSx SINE Alu -8 304 1 330 248 44 26 chr20 32472946 32473059 -39680823 - L1MC4a LINE L1 -1906 5902 5788 781 141 160 6 chr20 32473079 32473235 -39680647 + MER5A DNA MER1_type 4 183 -6 730 239 58 26 chr20 32473239 32473387 -39680495 - L1MC4a LINE L1 -2046 5762 5603 2176 96 6 45 chr20 32473387 32473700 -39680182 - AluSx SINE Alu -11 301 1 730 239 58 26 chr20 32473700 32473777 -39680105 - L1MC4a LINE L1 -2205 5603 5530 2176 117 3 19 chr20 32473830 32474147 -39679735 - AluSx SINE Alu 0 312 1 873 208 45 40 chr20 32474845 32474987 -39678895 + MIR SINE MIR 20 165 -97 2279 106 0 17 chr20 32474987 32475289 -39678593 + AluSg SINE Alu 1 297 -13 873 208 45 40 chr20 32475289 32475348 -39678534 + MIR SINE MIR 165 222 -40 716 150 0 0 chr20 32475395 32475515 -39678367 - FLAM_C SINE Alu -1 142 23 2074 101 63 0 chr20 32475824 32476110 -39677772 + AluSq SINE Alu 1 304 -9 433 239 43 29 chr20 32476375 32476513 -39677369 - MIR SINE MIR -122 140 1 1643 116 0 0 chr20 32476598 32476813 -39677069 - AluSg/x SINE Alu -16 296 82 2295 99 3 0 chr20 32476813 32477106 -39676776 - AluSx SINE Alu -17 295 1 1007 150 0 48 chr20 32477637 32477804 -39676078 + FRAM SINE Alu 1 159 -17 984 291 35 9 chr20 32477907 32478250 -39675632 - L1MC/D LINE L1 -2109 5699 5348 2506 80 0 0 chr20 32478254 32478556 -39675326 - AluY SINE Alu -9 302 1 543 179 0 0 chr20 32478682 32478766 -39675116 + FRAM/FAM SINE Alu 1 81 -95 181 320 90 0 chr20 32479140 32479240 -39674642 - L2 LINE L2 -188 3084 2976 219 139 0 0 chr20 32479303 32479339 -39674543 + (A)n Simple_repeat Simple_repeat 1 36 0 1994 152 3 13 chr20 32479387 32479689 -39674193 + AluSx SINE Alu 1 299 -13 2382 78 0 7 chr20 32479704 32480000 -39673882 - AluSg SINE Alu -16 294 1 2186 130 10 0 chr20 32480602 32480894 -39672988 + AluSx SINE Alu 1 295 -17 295 217 145 72 chr20 32481184 32481336 -39672546 - L1ME4a LINE L1 0 6121 5959 21 0 0 0 chr20 32481440 32481461 -39672421 + AT_rich Low_complexity Low_complexity 1 21 0 309 191 24 48 chr20 32481636 32481720 -39672162 - L1ME4a LINE L1 -199 5922 5841 1922 144 10 20 chr20 32481860 32482029 -39671853 - AluJb SINE Alu -12 300 134 2382 93 0 0 chr20 32482029 32482320 -39671562 - AluSg SINE Alu -19 291 1 1922 144 10 20 chr20 32482320 32482449 -39671433 - AluJb SINE Alu -178 134 5 564 165 28 0 chr20 32482538 32482647 -39671235 - FRAM SINE Alu -4 172 61 462 220 195 0 chr20 32482660 32482778 -39671104 - FLAM_C SINE Alu -1 142 2 194 0 39 0 chr20 32482780 32482806 -39671076 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1850 153 7 3 chr20 32482806 32483088 -39670794 - AluJo SINE Alu -29 283 1 1200 152 13 61 chr20 32483177 32483312 -39670570 + AluSx SINE Alu 1 122 -190 1711 100 0 9 chr20 32483312 32483541 -39670341 + AluSc SINE Alu 83 309 0 1200 152 13 61 chr20 32483541 32483635 -39670247 + AluSx SINE Alu 122 219 -93 271 116 0 0 chr20 32483729 32483772 -39670110 + Alu SINE Alu 251 293 -9 23 0 0 0 chr20 32483862 32483885 -39669997 + AT_rich Low_complexity Low_complexity 1 23 0 2372 95 0 7 chr20 32483947 32484252 -39669630 - AluSc SINE Alu -6 303 1 492 292 176 18 chr20 32484252 32484581 -39669301 - L1MC4a LINE L1 -1979 5829 5449 2323 96 21 0 chr20 32484591 32484882 -39669000 - AluSx SINE Alu -15 297 1 829 241 0 0 chr20 32484942 32485104 -39668778 - FRAM SINE Alu -4 162 1 911 114 45 0 chr20 32485133 32485265 -39668617 - AluSg/x SINE Alu -2 308 171 1143 190 19 0 chr20 32485305 32485516 -39668366 + AluJo SINE Alu 84 298 -14 2368 87 0 0 chr20 32485688 32485988 -39667894 + AluSc SINE Alu 1 300 -9 244 194 28 42 chr20 32486382 32486454 -39667428 - L1ME4a LINE L1 -451 5670 5600 1414 144 42 36 chr20 32486738 32486764 -39667118 - MER88 LTR ERVL 0 464 440 2353 105 0 7 chr20 32486764 32487070 -39666812 + AluSx SINE Alu 1 304 -8 1414 144 42 36 chr20 32487070 32487373 -39666509 - MER88 LTR ERVL -24 440 45 1511 176 107 94 chr20 32487389 32487421 -39666461 + MER88 LTR ERVL 1 31 -433 1785 190 7 0 chr20 32487421 32487721 -39666161 - AluJo SINE Alu -10 302 1 1511 176 107 94 chr20 32487721 32488045 -39665837 + MER88 LTR ERVL 31 349 -115 2195 120 7 0 chr20 32488045 32488345 -39665537 + AluJb SINE Alu 1 302 -10 2413 66 7 10 chr20 32488347 32488648 -39665234 + AluY SINE Alu 1 300 -11 1511 176 107 94 chr20 32488648 32488735 -39665147 + MER88 LTR ERVL 349 454 -10 458 280 60 6 chr20 32489231 32489413 -39664469 - L2 LINE L2 0 3313 3122 2251 92 3 3 chr20 32489624 32489907 -39663975 + AluSq SINE Alu 1 283 -30 797 280 173 8 chr20 32489930 32490589 -39663293 + L2 LINE L2 2529 3311 -2 248 333 50 37 chr20 32490629 32490945 -39662937 - L2 LINE L2 -249 3023 2704 198 249 30 146 chr20 32491852 32492017 -39661865 + MIR SINE MIR 2 147 -115 749 225 134 30 chr20 32492202 32492433 -39661449 + MIR SINE MIR 8 262 0 602 269 42 10 chr20 32492428 32492621 -39661261 - MIR SINE MIR -57 205 7 * 344 294 53 37 chr20 32492693 32492880 -39661002 - MER20B DNA MER1_type -593 190 1 2398 75 10 7 chr20 32493059 32493352 -39660530 + AluSc SINE Alu 1 294 -15 453 304 76 18 chr20 32493391 32493615 -39660267 + MIR SINE MIR 2 238 -24 2104 101 42 3 chr20 32494256 32494544 -39659338 + AluSx SINE Alu 5 303 -9 2019 160 0 6 chr20 32494744 32495056 -39658826 + AluJb SINE Alu 3 312 0 396 254 51 8 chr20 32495393 32495511 -39658371 - MIR SINE MIR -123 139 17 789 243 55 0 chr20 32496328 32496509 -39657373 - MIR SINE MIR -70 192 2 2298 93 7 10 chr20 32496828 32497130 -39656752 - AluSx SINE Alu -11 301 1 2539 54 0 10 chr20 32497193 32497488 -39656394 + AluY SINE Alu 1 292 -19 337 314 81 54 chr20 32497557 32497742 -39656140 - MIR SINE MIR -28 234 45 182 351 117 0 chr20 32498074 32498168 -39655714 - MER5A DNA MER1_type -84 105 1 402 290 57 30 chr20 32498230 32498405 -39655477 + MIR SINE MIR 2 184 -63 660 273 31 82 chr20 32498663 32498919 -39654963 + MIR SINE MIR 2 244 -18 817 159 0 29 chr20 32499026 32499164 -39654718 + AluJo SINE Alu 1 134 -178 1712 138 116 22 chr20 32499267 32499543 -39654339 - AluSx SINE Alu -9 303 2 2355 55 48 3 chr20 32499588 32499879 -39654003 - AluY SINE Alu -7 304 1 2211 91 17 14 chr20 32500017 32500314 -39653568 + AluSx SINE Alu 1 298 -14 915 156 31 0 chr20 32500325 32500485 -39653397 + FRAM SINE Alu 1 165 -1 295 218 209 0 chr20 32500508 32500618 -39653264 - MLT1J LTR MaLR -136 375 243 715 246 31 10 chr20 32502105 32502300 -39651582 - MIR SINE MIR -12 250 52 182 111 44 67 chr20 32502345 32502390 -39651492 + MIR SINE MIR 110 153 -55 1088 305 104 13 chr20 32504080 32504108 -39649774 - MLT1L LTR MaLR -20 595 571 1198 150 77 90 chr20 32504108 32504275 -39649607 + MER46B DNA MER2_type 1 37 -2694 1595 167 8 8 chr20 32504275 32504526 -39649356 + AluJo SINE Alu 37 287 -25 1198 150 77 90 chr20 32504526 32504724 -39649158 + MER46B DNA MER2_type 37 236 0 1088 305 104 13 chr20 32504724 32505232 -39648650 - MLT1L LTR MaLR -44 571 10 279 339 130 26 chr20 32505350 32505580 -39648302 - MLT1K LTR MaLR -210 378 125 604 311 24 19 chr20 32506118 32506327 -39647555 + MIR SINE MIR 2 211 -51 547 120 0 0 chr20 32506446 32506521 -39647361 + AluSg/x SINE Alu 208 282 -27 2496 87 0 0 chr20 32506559 32506858 -39647024 + AluSg SINE Alu 1 299 -11 357 272 88 0 chr20 32507016 32507130 -39646752 - MIR SINE MIR -62 200 77 813 107 113 96 chr20 32507764 32507941 -39645941 + AluSq SINE Alu 124 303 -10 2527 68 0 0 chr20 32507944 32508240 -39645642 + AluY SINE Alu 1 296 -15 193 373 109 0 chr20 32508521 32508631 -39645251 - L2 LINE L2 -10 3262 3141 2042 141 0 3 chr20 32509230 32509521 -39644361 + AluJo SINE Alu 1 290 -22 2288 95 13 25 chr20 32509567 32509882 -39644000 - AluSp SINE Alu -2 311 1 332 321 27 0 chr20 32510053 32510165 -39643717 - MIR SINE MIR -116 146 32 348 263 129 94 chr20 32510225 32510282 -39643600 - MIR SINE MIR -1 261 207 2515 67 3 0 chr20 32510282 32510582 -39643300 + AluY SINE Alu 1 301 -10 348 263 129 94 chr20 32510582 32510695 -39643187 - MIR SINE MIR -55 207 85 2394 91 13 3 chr20 32511244 32511551 -39642331 - AluSq SINE Alu -3 310 1 317 293 172 13 chr20 32511789 32512103 -39641779 + L2 LINE L2 2600 2963 -351 401 176 15 0 chr20 32512200 32512268 -39641614 - AluSg/x SINE Alu -104 196 128 1320 86 0 0 chr20 32512272 32512434 -39641448 - AluSg/x SINE Alu -17 295 134 1907 122 4 0 chr20 32512434 32512725 -39641157 - AluSc SINE Alu 0 309 35 240 263 263 0 chr20 32512811 32512891 -39640991 + L2 LINE L2 3199 3299 -14 288 244 58 0 chr20 32513438 32513524 -39640358 + MIR SINE MIR 73 163 -99 280 257 27 0 chr20 32514420 32514494 -39639388 - L2 LINE L2 0 3313 3238 562 272 38 22 chr20 32514713 32514897 -39638985 + MER5A DNA MER1_type 3 189 0 398 251 84 11 chr20 32514910 32515080 -39638802 - MIR SINE MIR -58 150 2 275 284 96 51 chr20 32515423 32515620 -39638262 - MLT1J LTR MaLR -196 315 110 227 289 202 10 chr20 32515952 32516056 -39637826 - MIR SINE MIR -126 136 13 260 136 51 31 chr20 32516231 32516304 -39637578 - MIR SINE MIR -26 236 166 1750 123 4 0 chr20 32516919 32517163 -39636719 - AluSx SINE Alu -63 249 5 2276 86 7 0 chr20 32517338 32517639 -39636243 + AluSp SINE Alu 1 303 -10 274 307 89 0 chr20 32517712 32517813 -39636069 - L2 LINE L2 -18 3254 3145 1828 166 0 0 chr20 32517838 32518133 -39635749 + AluJb SINE Alu 1 295 -17 470 113 0 31 chr20 32518205 32518409 -39635473 + AluSg/x SINE Alu 71 300 0 2336 88 0 3 chr20 32518427 32518733 -39635149 + AluY SINE Alu 1 305 -6 2268 92 0 7 chr20 32518740 32519046 -39634836 + AluSq SINE Alu 1 304 -9 222 288 61 0 chr20 32519249 32519315 -39634567 + MIR SINE MIR 23 92 -170 320 260 69 61 chr20 32519351 32519527 -39634355 + MER5A DNA MER1_type 16 178 0 279 208 111 0 chr20 32519590 32519662 -39634220 + MIR SINE MIR 33 112 -96 221 240 198 52 chr20 32520132 32520228 -39633654 + MIR SINE MIR 39 148 -60 209 139 23 0 chr20 32521051 32521094 -39632788 + CT-rich Low_complexity Low_complexity 1 44 0 449 346 81 26 chr20 32521252 32521486 -39632396 - L1MC4a LINE L1 -1833 5975 5729 220 226 32 0 chr20 32521553 32521615 -39632267 + CT-rich Low_complexity Low_complexity 1 64 0 186 169 364 39 chr20 32522054 32522131 -39631751 + MIR SINE MIR 82 183 -79 267 342 70 0 chr20 32523955 32524069 -39629813 - MIR SINE MIR -25 237 116 1605 165 158 18 chr20 32525002 32525216 -39628666 - Tigger2a DNA MER2_type -2274 434 251 1832 81 0 4 chr20 32525216 32525451 -39628431 + AluY SINE Alu 1 234 -77 1853 94 0 0 chr20 32525451 32525696 -39628186 + AluSg SINE Alu 49 293 -17 1605 165 158 18 chr20 32525696 32525861 -39628021 - Tigger2a DNA MER2_type -2456 252 1 256 208 139 0 chr20 32525870 32525942 -39627940 - MIR SINE MIR -69 193 112 23 33 0 0 chr20 32526697 32526727 -39627155 + GC_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr20 32526743 32526778 -39627104 + GC_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr20 32526855 32526887 -39626995 + GC_rich Low_complexity Low_complexity 1 32 0 373 221 23 17 chr20 32526919 32527033 -39626849 + MIR SINE MIR 30 146 -62 1562 127 72 28 chr20 32527047 32527338 -39626544 - AluJb SINE Alu -3 309 6 276 289 10 29 chr20 32527342 32527446 -39626436 + MIR SINE MIR 65 166 -96 314 244 61 0 chr20 32527461 32527543 -39626339 + L2 LINE L2 3184 3270 -2 271 277 181 0 chr20 32527625 32527768 -39626114 + MIR SINE MIR 66 252 -10 929 189 12 0 chr20 32527908 32528077 -39625805 - FRAM SINE Alu -12 164 1 2312 73 3 13 chr20 32528081 32528395 -39625487 - AluY SINE Alu 0 311 1 945 139 139 68 chr20 32528421 32528550 -39625332 + AluSg SINE Alu 3 121 -189 2254 101 0 7 chr20 32528550 32528856 -39625026 + AluSq SINE Alu 1 304 -9 945 139 139 68 chr20 32528856 32528992 -39624890 + AluSg SINE Alu 121 287 -23 2184 102 0 7 chr20 32528999 32529304 -39624578 + AluSx SINE Alu 1 303 -9 2054 118 3 16 chr20 32529304 32529609 -39624273 + AluSg SINE Alu 1 301 -9 1328 184 7 74 chr20 32529612 32529921 -39623961 + AluJo SINE Alu 1 288 -24 1529 154 72 4 chr20 32529921 32530200 -39623682 + AluJo SINE Alu 1 298 -14 895 166 70 0 chr20 32530971 32531128 -39622754 + AluSx SINE Alu 1 168 -144 4842 136 72 32 chr20 32531132 32532657 -39621225 - pTR5 LTR ERV1 0 2438 744 950 87 16 0 chr20 32532658 32532784 -39621098 + AluSx SINE Alu 166 293 -19 2337 85 3 0 chr20 32533111 32533418 -39620464 - AluSp SINE Alu -5 308 1 258 32 0 0 chr20 32533423 32533454 -39620428 + (TG)n Simple_repeat Simple_repeat 2 32 0 1259 164 4 66 chr20 32533504 32533624 -39620258 - AluJo SINE Alu -66 246 149 2330 84 0 3 chr20 32533624 32533935 -39619947 - AluSx SINE Alu -2 310 1 1259 164 4 66 chr20 32533935 32534070 -39619812 - AluJo SINE Alu -163 149 7 332 256 124 16 chr20 32534134 32534255 -39619627 + MIR SINE MIR 20 153 -109 590 111 30 0 chr20 32534632 32534731 -39619151 + U6 snRNA snRNA 1 102 -5 2321 64 3 3 chr20 32535361 32535656 -39618226 + AluSg SINE Alu 1 295 -15 815 128 0 48 chr20 32535702 32535827 -39618055 + FLAM_C SINE Alu 14 132 -11 662 161 89 0 chr20 32535849 32535973 -39617909 + AluJb SINE Alu 1 135 -177 2240 92 3 0 chr20 32535974 32536268 -39617614 + AluSc SINE Alu 1 295 -14 2018 130 3 10 chr20 32536270 32536564 -39617318 + AluSx SINE Alu 1 294 -18 405 0 0 0 chr20 32536564 32536609 -39617273 + (TA)n Simple_repeat Simple_repeat 2 46 0 2146 91 0 14 chr20 32536623 32536920 -39616962 + AluSc SINE Alu 1 293 -16 1089 158 6 0 chr20 32536921 32537086 -39616796 - AluSx SINE Alu -140 172 7 449 116 0 0 chr20 32537091 32537160 -39616722 + L1MB8 LINE L1 6110 6178 0 2224 92 0 3 chr20 32537169 32537461 -39616421 + AluSg SINE Alu 1 291 -19 603 174 122 0 chr20 32537906 32538021 -39615861 - FLAM_A SINE Alu -1 132 4 1189 188 0 31 chr20 32538134 32538270 -39615612 + AluJb SINE Alu 1 130 -182 2008 120 7 0 chr20 32538270 32538582 -39615300 + AluSx SINE Alu 1 314 0 1189 188 0 31 chr20 32538582 32538667 -39615215 + AluJb SINE Alu 130 216 -96 2228 83 10 0 chr20 32538708 32539010 -39614872 - AluSx SINE Alu -6 306 2 2188 215 67 47 chr20 32539129 32539516 -39614366 + MER4B LTR ERV1 4 409 -201 2267 101 0 0 chr20 32539516 32539814 -39614068 - AluSx SINE Alu -14 298 1 2188 215 67 47 chr20 32539814 32540021 -39613861 + MER4B LTR ERV1 409 610 0 235 356 54 7 chr20 32540116 32540225 -39613657 + MIR3 SINE MIR 40 159 -49 2124 74 3 37 chr20 32540225 32540379 -39613503 - AluSg SINE Alu -21 289 148 2366 52 3 10 chr20 32540379 32540686 -39613196 - AluY SINE Alu -6 305 1 2124 74 3 37 chr20 32540686 32540829 -39613053 - AluSg SINE Alu -162 148 2 235 356 54 7 chr20 32540829 32540868 -39613014 + MIR3 SINE MIR 159 195 -13 210 308 87 10 chr20 32540846 32540950 -39612932 + MIR SINE MIR 100 211 -51 * 2032 96 0 11 chr20 32542128 32542463 -39611419 - AluSc SINE Alu 0 332 1 1765 141 17 10 chr20 32542463 32542753 -39611129 - AluJo SINE Alu -8 304 13 558 265 89 62 chr20 32543017 32543109 -39610773 - L1ME3 LINE L1 -332 5830 5742 805 128 0 64 chr20 32543109 32543250 -39610632 - FLAM_C SINE Alu -1 132 1 558 265 89 62 chr20 32543250 32543482 -39610400 - L1ME3 LINE L1 -420 5742 5497 2413 61 0 3 chr20 32543482 32543778 -39610104 - AluY SINE Alu -16 295 1 1461 177 16 60 chr20 32543850 32544034 -39609848 - AluJb SINE Alu -9 303 137 2382 80 0 0 chr20 32544034 32544334 -39609548 - AluSq SINE Alu -13 300 1 1461 177 16 60 chr20 32544334 32544466 -39609416 - AluJb SINE Alu -175 137 1 308 352 5 51 chr20 32544554 32544750 -39609132 + L2 LINE L2 2990 3176 -96 292 318 11 11 chr20 32544805 32544893 -39608989 + MER91A DNA MER1_type 107 194 -2 2103 106 36 0 chr20 32545201 32545502 -39608380 - AluSx SINE Alu 0 312 1 944 117 0 0 chr20 32545517 32545645 -39608237 - FLAM_C SINE Alu -5 128 1 1398 171 19 65 chr20 32545647 32545811 -39608071 - AluJo SINE Alu -14 298 153 2511 65 0 0 chr20 32545811 32546121 -39607761 - AluY SINE Alu -1 310 1 1398 171 19 65 chr20 32546121 32546266 -39607616 - AluJo SINE Alu -159 153 3 1975 124 21 10 chr20 32546283 32546443 -39607439 - AluSx SINE Alu -19 293 127 2426 60 0 7 chr20 32546443 32546743 -39607139 - AluY SINE Alu -13 298 1 1975 124 21 10 chr20 32546743 32546872 -39607010 - AluSx SINE Alu -185 127 1 2177 114 0 0 chr20 32547591 32547889 -39605993 - AluSx SINE Alu -14 298 1 211 286 0 16 chr20 32548795 32548858 -39605024 - MIR SINE MIR -83 179 118 253 125 0 0 chr20 32549154 32549194 -39604688 + MIR SINE MIR 80 119 -143 * 751 276 128 33 chr20 32549181 32549572 -39604310 - L2 LINE L2 -31 3282 2855 442 233 112 0 chr20 32549977 32550093 -39603789 + MIR SINE MIR 31 159 -103 1972 82 0 44 chr20 32550119 32550412 -39603470 - AluSx SINE Alu 0 312 33 359 298 24 24 chr20 32550421 32550545 -39603337 - L2 LINE L2 -1 3312 3189 183 318 16 0 chr20 32550533 32550596 -39603286 + MIR SINE MIR 196 259 -3 * 400 278 56 0 chr20 32550693 32550801 -39603081 - MIR SINE MIR -36 226 113 332 279 8 78 chr20 32550837 32550966 -39602916 + MIR SINE MIR 93 212 -50 292 237 66 40 chr20 32551192 32551210 -39602672 + L1MD2 LINE L1 6105 6121 -238 1722 149 10 10 chr20 32551210 32551505 -39602377 + AluJb SINE Alu 1 295 -17 292 237 66 40 chr20 32551505 32551570 -39602312 + L1MD2 LINE L1 6121 6183 -176 2009 113 31 3 chr20 32551570 32551861 -39602021 + AluSx SINE Alu 2 300 -12 2121 110 7 3 chr20 32551861 32552162 -39601720 + AluSq SINE Alu 1 302 -11 292 237 66 40 chr20 32552162 32552228 -39601654 + L1MD2 LINE L1 6182 6260 -99 * 924 185 142 50 chr20 32552226 32552321 -39601561 + L1ME LINE L1 5492 5577 -589 1589 152 9 109 chr20 32552321 32552651 -39601231 - AluJb SINE Alu -3 299 3 924 185 142 50 chr20 32552651 32552688 -39601194 + L1ME LINE L1 5577 5609 -557 2007 120 0 0 chr20 32552688 32552963 -39600919 + AluSx SINE Alu 1 275 -37 924 185 142 50 chr20 32552963 32553003 -39600879 + L1ME LINE L1 5609 5644 -522 2259 58 0 51 chr20 32553003 32553314 -39600568 + AluY SINE Alu 1 295 -16 924 185 142 50 chr20 32553314 32553442 -39600440 + L1ME LINE L1 5644 5822 -344 2104 93 3 20 chr20 32553447 32553748 -39600134 + AluSx SINE Alu 6 301 -11 2263 90 0 22 chr20 32553748 32554060 -39599822 + AluSg1 SINE Alu 1 305 -4 2500 68 0 0 chr20 32554060 32554369 -39599513 + AluY SINE Alu 1 309 -2 1298 90 0 0 chr20 32554370 32554547 -39599335 + AluY SINE Alu 132 308 -3 2065 128 0 3 chr20 32554547 32554844 -39599038 + AluSx SINE Alu 1 296 -16 1949 158 0 0 chr20 32554888 32555198 -39598684 - AluSx SINE Alu -2 310 1 1485 145 0 0 chr20 32555221 32555448 -39598434 - AluSg/x SINE Alu -5 307 81 2096 120 0 7 chr20 32555502 32555801 -39598081 + AluSg SINE Alu 1 297 -13 2070 103 38 0 chr20 32555812 32556102 -39597780 + AluSx SINE Alu 1 301 -11 2231 84 3 7 chr20 32556796 32557092 -39596790 - AluSg SINE Alu -15 295 1 2359 64 7 0 chr20 32557102 32557397 -39596485 - AluSx SINE Alu -9 303 7 261 311 88 15 chr20 32557506 32557614 -39596268 - MIR SINE MIR -72 136 42 241 257 54 14 chr20 32558421 32558495 -39595387 + MIR3 SINE MIR 78 154 -54 24 0 0 0 chr20 32559066 32559090 -39594792 + GC_rich Low_complexity Low_complexity 1 24 0 198 216 0 0 chr20 32560311 32560348 -39593534 - MER5A DNA MER1_type -24 165 129 212 296 57 23 chr20 32560415 32560503 -39593379 - MIR3 SINE MIR -50 158 68 237 337 0 24 chr20 32561307 32561390 -39592492 - MIR3 SINE MIR -37 171 91 188 284 142 43 chr20 32561431 32561572 -39592310 - MIR SINE MIR 0 262 108 261 283 44 35 chr20 32561721 32561834 -39592048 + MIR SINE MIR 149 262 0 350 305 8 16 chr20 32562517 32562645 -39591237 - MIR SINE MIR 0 262 136 240 319 184 7 chr20 32562728 32562869 -39591013 + MIR SINE MIR 88 253 -9 350 239 0 103 chr20 32562889 32562935 -39590947 - MIR SINE MIR -78 184 135 2059 127 0 7 chr20 32562935 32563234 -39590648 - AluSx SINE Alu -15 297 1 350 239 0 103 chr20 32563234 32563304 -39590578 - MIR SINE MIR -127 135 80 1770 115 57 7 chr20 32563525 32563804 -39590078 - AluSx SINE Alu -19 293 1 2452 81 0 0 chr20 32563804 32564112 -39589770 - AluSx SINE Alu -3 309 1 208 239 165 18 chr20 32564525 32564634 -39589248 + MIR3 SINE MIR 8 132 -76 242 50 0 0 chr20 32564637 32564677 -39589205 - AluSx SINE Alu -3 305 266 1492 131 5 0 chr20 32564677 32564898 -39588984 - AluSx SINE Alu -90 222 1 2101 112 3 10 chr20 32564908 32565212 -39588670 - AluSg SINE Alu -8 302 1 343 260 89 34 chr20 32565343 32565489 -39588393 - L2 LINE L2 -5 3308 3155 265 254 202 18 chr20 32565489 32565603 -39588279 + MER69 DNA AcHobo 1 135 -1091 1799 168 7 0 chr20 32565764 32565940 -39587942 - AluSq SINE Alu -2 311 131 2187 102 7 3 chr20 32565940 32566243 -39587639 - AluSx SINE Alu -8 304 1 1096 165 21 5 chr20 32566243 32566375 -39587507 - AluJo SINE Alu -177 135 1 1799 168 7 0 chr20 32566243 32566375 -39587507 - AluSq SINE Alu -182 131 1 2592 50 0 0 chr20 32566792 32567091 -39586791 - AluY SINE Alu -11 300 2 2419 50 40 3 chr20 32567136 32567468 -39586414 - AluY SINE Alu 0 343 1 2061 82 60 0 chr20 32567468 32567748 -39586134 - AluSp SINE Alu -12 301 5 442 138 0 0 chr20 32567768 32567848 -39586034 - AluS SINE Alu 0 309 230 1199 103 0 6 chr20 32567850 32568006 -39585876 - AluSq SINE Alu -158 155 1 515 118 200 9 chr20 32568102 32568212 -39585670 + FLAM_C SINE Alu 1 131 -2 315 122 0 0 chr20 32568212 32568261 -39585621 + (TG)n Simple_repeat Simple_repeat 2 50 0 345 211 42 0 chr20 32568263 32568334 -39585548 + L1MCa LINE L1 1995 2068 -4358 * 405 305 0 0 chr20 32568289 32568417 -39585465 - L1MC4 LINE L1 -1339 6703 6614 273 163 0 0 chr20 32568417 32568466 -39585416 + (TA)n Simple_repeat Simple_repeat 1 49 0 506 308 20 16 chr20 32568660 32568810 -39585072 - L1ME3A LINE L1 -219 5951 5798 2429 77 7 0 chr20 32568810 32569108 -39584774 - AluSp SINE Alu -13 300 1 506 308 20 16 chr20 32569108 32569210 -39584672 - L1ME3A LINE L1 -372 5798 5698 387 296 0 9 chr20 32569310 32569425 -39584457 - MIR3 SINE MIR -13 195 82 2273 110 0 3 chr20 32569569 32569868 -39584014 + AluSg SINE Alu 1 298 -12 2379 106 0 3 chr20 32569912 32570214 -39583668 + AluSc SINE Alu 2 302 -7 1782 156 41 0 chr20 32570296 32570566 -39583316 - AluJb SINE Alu -31 281 1 2265 105 0 3 chr20 32570574 32570869 -39583013 - AluSx SINE Alu -18 294 1 852 273 91 6 chr20 32570870 32571222 -39582660 + L2 LINE L2 2523 2904 -410 1534 164 18 29 chr20 32571340 32571621 -39582261 - AluJo SINE Alu -2 310 33 1315 83 65 0 chr20 32571621 32571790 -39582092 - AluJb SINE Alu -110 202 23 545 191 18 18 chr20 32571795 32571905 -39581977 - MLT1G LTR MaLR -462 128 19 2409 85 0 16 chr20 32571918 32572234 -39581648 + AluSp SINE Alu 1 311 -2 443 230 63 16 chr20 32572260 32572386 -39581496 + FLAM_A SINE Alu 1 132 -1 1166 101 0 35 chr20 32572528 32572697 -39581185 + AluSx SINE Alu 1 163 -149 1348 174 0 99 chr20 32572713 32573046 -39580836 + AluJb SINE Alu 2 301 -1 701 187 0 8 chr20 32573046 32573169 -39580713 + MLT1H1 LTR MaLR 418 539 -16 489 243 100 21 chr20 32573204 32573344 -39580538 + L2 LINE L2 3161 3311 -2 378 299 43 24 chr20 32573867 32574031 -39579851 - MIR SINE MIR -25 237 71 231 36 0 0 chr20 32574048 32574076 -39579806 + (CAT)n Simple_repeat Simple_repeat 3 30 0 2322 220 48 18 chr20 32574105 32574227 -39579655 + L1MD3 LINE L1 7122 7239 -743 2358 93 3 0 chr20 32574227 32574518 -39579364 - AluSg SINE Alu -18 292 1 2322 220 48 18 chr20 32574518 32574826 -39579056 + L1MD3 LINE L1 7239 7536 -446 1935 152 3 13 chr20 32574826 32575135 -39578747 + AluJb SINE Alu 2 307 -5 2212 97 3 44 chr20 32575144 32575464 -39578418 + AluY SINE Alu 1 307 -4 2322 220 48 18 chr20 32575464 32575699 -39578183 + L1MD3 LINE L1 7543 7982 0 1612 168 4 8 chr20 32575722 32575978 -39577904 + AluJo SINE Alu 1 255 -57 356 271 38 114 chr20 32576033 32576096 -39577786 + L1MDa LINE L1 34 100 -6440 2327 113 0 0 chr20 32576096 32576406 -39577476 + AluSx SINE Alu 3 312 0 356 271 38 114 chr20 32576406 32576659 -39577223 + L1MDa LINE L1 100 326 -6214 1851 165 0 34 chr20 32576737 32576897 -39576985 - AluJb SINE Alu -19 293 146 2489 82 0 3 chr20 32576897 32577203 -39576679 - AluY SINE Alu -6 305 1 1851 165 0 34 chr20 32577203 32577339 -39576543 - AluJb SINE Alu -166 146 7 185 0 40 0 chr20 32577389 32577414 -39576468 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2056 114 3 33 chr20 32577416 32577715 -39576167 - AluSq SINE Alu -23 290 1 2450 81 13 0 chr20 32577736 32578044 -39575838 - AluSp SINE Alu -1 312 1 405 0 0 0 chr20 32578142 32578187 -39575695 + (CA)n Simple_repeat Simple_repeat 1 45 0 738 165 8 8 chr20 32578211 32578333 -39575549 + AluJo/FLAM SINE Alu 1 123 -175 2355 84 3 3 chr20 32578333 32578629 -39575253 - AluY SINE Alu -15 296 1 30 0 0 0 chr20 32578633 32578663 -39575219 + AT_rich Low_complexity Low_complexity 1 30 0 775 251 71 14 chr20 32578663 32578915 -39574967 + L1M4 LINE L1 2320 2593 -3553 2208 122 0 25 chr20 32578915 32579236 -39574646 + AluSq SINE Alu 1 313 0 775 251 71 14 chr20 32579236 32579278 -39574604 + L1M4 LINE L1 2593 2631 -3515 801 126 0 2 chr20 32579288 32579447 -39574435 - AluSg/x SINE Alu -3 307 118 2337 110 0 0 chr20 32579450 32579760 -39574122 - AluSx SINE Alu -2 310 1 513 199 92 0 chr20 32579763 32579894 -39573988 - L1M4 LINE L1 -3321 2825 2683 1154 171 5 0 chr20 32579897 32580096 -39573786 + AluSg/x SINE Alu 112 311 -1 849 192 46 113 chr20 32580097 32580220 -39573662 + L1M4 LINE L1 2835 2965 -3181 2076 121 3 0 chr20 32580220 32580502 -39573380 - AluSx SINE Alu -29 283 1 849 192 46 113 chr20 32580502 32580576 -39573306 + L1M4 LINE L1 2965 3042 -3104 2021 123 0 60 chr20 32580576 32580747 -39573135 - AluSg SINE Alu -12 298 153 2456 73 0 13 chr20 32580747 32581062 -39572820 - AluYb8 SINE Alu -7 311 1 2021 123 0 60 chr20 32581062 32581207 -39572675 - AluSg SINE Alu -157 153 1 849 192 46 113 chr20 32581207 32581425 -39572457 + L1M4 LINE L1 3042 3223 -2923 774 197 183 90 chr20 32581428 32581583 -39572299 + MLT1C LTR MaLR 152 291 -176 4535 32 2 2 chr20 32581583 32582145 -39571737 + L1PA4 LINE L1 5592 6153 -2 774 197 183 90 chr20 32582145 32582278 -39571604 + MLT1C LTR MaLR 291 467 0 436 186 7 71 chr20 32582278 32582339 -39571543 + L1M4 LINE L1 4269 4332 -1814 2077 151 3 0 chr20 32582339 32582637 -39571245 - AluSx SINE Alu -13 299 1 436 186 7 71 chr20 32582637 32582676 -39571206 + L1M4 LINE L1 4332 4360 -1786 742 156 47 8 chr20 32582676 32582804 -39571078 - FLAM_A SINE Alu 0 133 1 436 186 7 71 chr20 32582804 32582842 -39571040 + L1M4 LINE L1 4360 4399 -1747 2037 109 3 56 chr20 32582844 32583174 -39570708 + AluSq SINE Alu 1 314 0 1795 189 0 10 chr20 32583345 32583651 -39570231 + AluJb SINE Alu 1 303 -9 232 232 54 0 chr20 32583661 32583717 -39570165 - L2 LINE L2 -250 3063 3005 1636 231 61 49 chr20 32583832 32584215 -39569667 - MLT1G1 LTR MaLR 0 595 201 2199 110 0 39 chr20 32584215 32584383 -39569499 - AluSg1 SINE Alu -10 299 147 2464 76 7 0 chr20 32584383 32584684 -39569198 - AluSq SINE Alu -3 310 8 2199 110 0 39 chr20 32584684 32584824 -39569058 - AluSg1 SINE Alu -162 147 3 1636 231 61 49 chr20 32584824 32585028 -39568854 - MLT1G1 LTR MaLR -394 201 1 386 242 58 0 chr20 32585144 32585264 -39568618 - L2 LINE L2 -336 2977 2851 1863 143 10 55 chr20 32585809 32586116 -39567766 - AluJb SINE Alu -19 293 1 851 125 0 29 chr20 32587328 32587464 -39566418 + FLAM_C SINE Alu 2 133 0 2250 108 0 7 chr20 32587585 32587891 -39565991 - AluSx SINE Alu -8 304 1 1745 129 102 0 chr20 32588171 32588457 -39565425 - AluSx SINE Alu 0 312 1 29 0 0 0 chr20 32588526 32588555 -39565327 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 32588590 32588612 -39565270 + (C)n Simple_repeat Simple_repeat 1 22 0 685 176 145 0 chr20 32589026 32589179 -39564703 - AluSg/x SINE Alu 0 304 133 281 258 63 78 chr20 32589179 32589304 -39564578 + L2 LINE L2 2756 2881 -391 2410 109 0 0 chr20 32589304 32589617 -39564265 - AluSq SINE Alu 0 313 1 281 258 63 78 chr20 32589617 32589632 -39564250 + L2 LINE L2 2881 2895 -377 2395 90 3 0 chr20 32589632 32589932 -39563950 - AluY SINE Alu -10 301 1 281 258 63 78 chr20 32589932 32590009 -39563873 + L2 LINE L2 2895 2964 -308 270 327 96 19 chr20 32590010 32590114 -39563768 + L2 LINE L2 3152 3263 -9 2207 119 10 10 chr20 32590132 32590442 -39563440 - AluSx SINE Alu 0 312 3 2059 95 4 7 chr20 32590485 32590759 -39563123 - AluY SINE Alu -10 301 29 2210 110 0 13 chr20 32590762 32590942 -39562940 - AluSx SINE Alu 0 312 136 2435 92 3 0 chr20 32590942 32591246 -39562636 - AluSg SINE Alu -5 305 1 2210 110 0 13 chr20 32591246 32591373 -39562509 - AluSx SINE Alu -176 136 9 26 0 0 0 chr20 32591697 32591723 -39562159 + GC_rich Low_complexity Low_complexity 1 26 0 2294 104 0 7 chr20 32593397 32593694 -39560188 - AluSg SINE Alu -15 295 1 353 348 75 43 chr20 32594093 32594375 -39559507 - L2 LINE L2 -19 3253 2963 299 245 142 19 chr20 32594639 32594745 -39559137 - L2 LINE L2 0 3313 3195 369 0 0 0 chr20 32594793 32594834 -39559048 + (CA)n Simple_repeat Simple_repeat 2 42 0 1017 49 83 0 chr20 32594874 32595018 -39558864 + L1PA4 LINE L1 5997 6152 -3 1067 173 0 32 chr20 32595047 32595232 -39558650 + AluJb SINE Alu 134 312 0 328 302 28 30 chr20 32595331 32595476 -39558406 - MIR SINE MIR -61 147 3 2042 122 13 23 chr20 32595540 32595844 -39558038 - AluSg SINE Alu -9 301 1 884 127 8 30 chr20 32595857 32595991 -39557891 - FLAM_C SINE Alu -12 131 1 2642 43 7 0 chr20 32596270 32596573 -39557309 - AluY SINE Alu -4 307 3 912 176 0 0 chr20 32596578 32596720 -39557162 - AluJo SINE Alu -170 142 1 281 283 58 93 chr20 32596722 32596927 -39556955 + L2 LINE L2 2751 2948 -366 436 223 91 8 chr20 32597036 32597157 -39556725 + L2 LINE L2 3178 3308 -5 430 167 125 17 chr20 32597543 32597663 -39556219 + MIR SINE MIR 102 234 -28 1782 94 5 0 chr20 32597724 32597947 -39555935 - AluSx SINE Alu -86 226 3 649 265 121 9 chr20 32598080 32598303 -39555579 - MIR SINE MIR -1 261 14 1154 69 0 14 chr20 32599096 32599241 -39554641 + AluSq/x SINE Alu 1 143 -169 1072 101 0 34 chr20 32599248 32599260 -39554622 - AluSg SINE Alu -167 143 132 2635 59 0 0 chr20 32599260 32599567 -39554315 - AluY SINE Alu -4 307 1 1072 101 0 34 chr20 32599567 32599702 -39554180 - AluSg SINE Alu -178 132 1 648 125 0 0 chr20 32599706 32599802 -39554080 - AluJb SINE Alu -187 125 30 902 218 5 24 chr20 32599830 32600041 -39553841 - LTR16B LTR ERVL 0 464 258 344 174 20 61 chr20 32600052 32600150 -39553732 - LTR41 LTR ERVL -7 766 673 2258 121 7 0 chr20 32600156 32600453 -39553429 + AluSx SINE Alu 1 299 -13 2232 108 7 0 chr20 32600461 32600756 -39553126 + AluSp SINE Alu 1 297 -16 361 215 174 21 chr20 32601217 32601361 -39552521 - LTR41 LTR ERVL -607 166 1 247 325 36 24 chr20 32601361 32601444 -39552438 - LTR16B LTR ERVL -205 259 176 1857 150 41 107 chr20 32601459 32601823 -39552059 - MLT2A2 LTR ERVL 0 554 167 2088 121 4 0 chr20 32601823 32602126 -39551756 - AluSx SINE Alu 0 304 1 1857 150 41 107 chr20 32602126 32602307 -39551575 - MLT2A2 LTR ERVL -387 167 24 2546 72 3 0 chr20 32602307 32602612 -39551270 - AluY SINE Alu -5 306 1 1857 150 41 107 chr20 32602612 32602635 -39551247 - MLT2A2 LTR ERVL -530 24 1 350 343 0 66 chr20 32602637 32602803 -39551079 - LTR16B LTR ERVL -301 163 9 1743 92 21 71 chr20 32602897 32603211 -39550671 - AluSq SINE Alu 0 314 15 412 188 10 31 chr20 32603223 32603319 -39550563 - MLT1B LTR MaLR -280 110 17 1985 147 7 0 chr20 32603346 32603638 -39550244 + AluSx SINE Alu 1 294 -18 1293 247 75 77 chr20 32603818 32604149 -39549733 - MLT1G1 LTR MaLR 0 595 265 2188 114 3 0 chr20 32604149 32604438 -39549444 + AluSc SINE Alu 1 290 -19 1293 247 75 77 chr20 32604438 32604480 -39549402 - MLT1G1 LTR MaLR -330 265 224 2421 89 6 13 chr20 32604480 32604794 -39549088 - AluSx SINE Alu 0 312 1 1293 247 75 77 chr20 32604794 32604977 -39548905 - MLT1G1 LTR MaLR -371 224 39 2445 80 27 0 chr20 32604989 32605326 -39548556 - L1PA10 LINE L1 0 6168 5823 941 158 6 0 chr20 32605326 32605484 -39548398 - FRAM SINE Alu -7 159 1 650 185 0 0 chr20 32605678 32605786 -39548096 + FLAM_C SINE Alu 2 109 -34 2172 100 4 4 chr20 32605798 32606117 -39547765 - AluSc SINE Alu 0 319 1 832 161 18 60 chr20 32606117 32606176 -39547706 - L1MDa LINE L1 -6362 178 118 2165 151 0 0 chr20 32606176 32606487 -39547395 - AluSx SINE Alu -1 311 1 832 161 18 60 chr20 32606487 32606595 -39547287 - L1MDa LINE L1 -6422 118 18 850 240 40 48 chr20 32606608 32606962 -39546920 - L1MC5 LINE L1 -431 7530 7180 646 271 214 7 chr20 32606956 32607259 -39546623 + L1MC/D LINE L1 5355 5720 -2088 * 1279 174 32 9 chr20 32607259 32607477 -39546405 + AluJb SINE Alu 72 294 -18 679 267 54 47 chr20 32607633 32607891 -39545991 + LTR16C LTR ERVL 135 394 -97 577 277 161 5 chr20 32608007 32608025 -39545857 - MIR SINE MIR -1 261 247 2436 63 7 7 chr20 32608025 32608327 -39545555 + AluY SINE Alu 1 302 -9 577 277 161 5 chr20 32608327 32608532 -39545350 - MIR SINE MIR -15 247 3 29 0 0 0 chr20 32608783 32608812 -39545070 + AT_rich Low_complexity Low_complexity 1 29 0 787 151 24 0 chr20 32608862 32608988 -39544894 - FLAM_C SINE Alu -3 130 2 2398 95 0 3 chr20 32608988 32609294 -39544588 - AluSq SINE Alu -8 305 1 2053 107 20 3 chr20 32609719 32610017 -39543865 + AluSx SINE Alu 1 303 -9 2393 100 3 0 chr20 32610056 32610365 -39543517 - AluSp SINE Alu -3 310 1 2414 93 0 31 chr20 32610387 32610710 -39543172 - AluSq SINE Alu 0 313 1 2293 112 3 13 chr20 32610853 32611167 -39542715 - AluSx SINE Alu -1 311 1 1992 157 0 3 chr20 32611169 32611468 -39542414 - AluJb SINE Alu -14 298 1 782 153 0 23 chr20 32611547 32611678 -39542204 + FLAM_C SINE Alu 3 130 -3 24 0 0 0 chr20 32611763 32611787 -39542095 + AT_rich Low_complexity Low_complexity 1 24 0 2202 127 0 0 chr20 32611801 32612100 -39541782 + AluSx SINE Alu 1 299 -13 362 299 33 73 chr20 32612100 32612209 -39541673 - L1M4 LINE L1 -2200 3946 3834 2446 109 0 0 chr20 32612209 32612521 -39541361 + AluSx SINE Alu 1 312 0 362 299 33 73 chr20 32612521 32612685 -39541197 - L1M4 LINE L1 -2312 3834 3684 283 171 26 13 chr20 32612685 32612761 -39541121 + CT-rich Low_complexity Low_complexity 3 79 0 2413 64 0 3 chr20 32612782 32613094 -39540788 - AluY SINE Alu 0 312 2 2095 109 3 62 chr20 32613386 32613708 -39540174 - AluSx SINE Alu -3 309 7 2350 73 0 61 chr20 32613738 32614067 -39539815 - AluSg SINE Alu -1 309 1 24 32 0 0 chr20 32614126 32614157 -39539725 + AT_rich Low_complexity Low_complexity 1 31 0 1314 117 164 107 chr20 32614493 32614774 -39539108 + AluSx SINE Alu 1 297 -15 275 229 76 17 chr20 32614776 32614894 -39538988 + L1MC4a LINE L1 5854 5978 -1830 1949 125 18 4 chr20 32614902 32615213 -39538669 + AluJo SINE Alu 1 315 0 225 0 0 0 chr20 32615586 32615611 -39538271 + (CGGGG)n Simple_repeat Simple_repeat 4 28 0 283 330 4 33 chr20 32615819 32615957 -39537925 - MIR SINE MIR -46 162 29 211 346 77 13 chr20 32615974 32616130 -39537752 + L2 LINE L2 2620 2785 -529 227 316 12 76 chr20 32616231 32616402 -39537480 + L2 LINE L2 2937 3096 -176 261 271 199 6 chr20 32616456 32616637 -39537245 + L2 LINE L2 2443 2658 -656 1332 139 84 17 chr20 32616641 32616879 -39537003 + MER39 LTR ERV1 4 257 -450 365 271 10 11 chr20 32616879 32616973 -39536909 - L1MC4 LINE L1 -1341 6981 1995 * 381 131 0 0 chr20 32616963 32617024 -39536858 + (CA)n Simple_repeat Simple_repeat 2 62 0 2149 25 0 12 chr20 32617038 32617279 -39536603 - AluY SINE Alu -18 293 56 355 180 0 0 chr20 32617279 32617340 -39536542 + MER39 LTR ERV1 242 302 -405 1357 180 20 16 chr20 32617350 32617595 -39536287 + AluJo SINE Alu 51 296 -16 394 107 80 27 chr20 32617608 32617683 -39536199 + MER39 LTR ERV1 361 439 -268 602 209 31 16 chr20 32617683 32617812 -39536070 - AluJo SINE Alu -173 139 9 381 125 42 28 chr20 32617820 32617892 -39535990 + MER39 LTR ERV1 635 707 0 332 260 122 32 chr20 32617912 32618035 -39535847 + L2 LINE L2 3173 3306 -7 * 463 178 140 19 chr20 32618029 32618136 -39535746 + L2 LINE L2 3133 3252 -20 331 336 17 0 chr20 32618126 32618242 -39535640 - MIR3 SINE MIR -48 160 43 * 227 310 33 51 chr20 32620128 32620381 -39533501 - L2 LINE L2 -284 2988 2744 442 273 53 7 chr20 32620834 32620984 -39532898 - MIR SINE MIR -71 191 35 2321 87 17 0 chr20 32621014 32621303 -39532579 + AluSx SINE Alu 1 294 -18 270 0 0 0 chr20 32621320 32621350 -39532532 + (TG)n Simple_repeat Simple_repeat 2 31 0 288 280 121 6 chr20 32621373 32621530 -39532352 + MER102a DNA MER1_type 128 302 -28 658 249 107 21 chr20 32621773 32622144 -39531738 + L2 LINE L2 2721 3114 -199 1927 154 55 0 chr20 32622146 32622439 -39531443 - AluSx SINE Alu -3 309 1 2477 80 3 3 chr20 32622439 32622740 -39531142 - AluSp SINE Alu -12 301 1 484 182 152 0 chr20 32622744 32622843 -39531039 - FLAM_A SINE Alu -6 136 23 1968 139 3 23 chr20 32622884 32623194 -39530688 - AluJo SINE Alu -8 304 1 2074 100 54 0 chr20 32623294 32623573 -39530309 - AluSx SINE Alu -18 294 1 223 247 137 0 chr20 32623576 32623649 -39530233 + L2 LINE L2 3149 3231 -41 190 250 50 0 chr20 32623675 32623715 -39530167 - L2 LINE L2 -10 3303 3262 * 309 309 242 11 chr20 32623682 32623860 -39530022 - MIR SINE MIR -13 249 31 200 297 11 66 chr20 32625035 32625126 -39528756 - MIR SINE MIR -85 123 38 182 286 238 0 chr20 32625443 32625506 -39528376 - L2 LINE L2 -46 3267 3190 516 191 139 0 chr20 32625507 32625622 -39528260 + MER106A DNA MER1_type 5 135 -101 310 124 79 79 chr20 32625718 32625807 -39528075 - L1MC4 LINE L1 -1339 6703 6615 448 144 45 45 chr20 32625808 32625919 -39527963 + MER106B DNA MER1_type 949 1059 0 232 183 83 0 chr20 32626005 32626018 -39527864 - L2 LINE L2 -329 2984 2973 2273 122 3 0 chr20 32626018 32626314 -39527568 + AluSq SINE Alu 1 297 -16 232 183 83 0 chr20 32626314 32626360 -39527522 - L2 LINE L2 -340 2973 2920 188 270 68 27 chr20 32626377 32626451 -39527431 + L2 LINE L2 3111 3187 -85 721 183 36 22 chr20 32626694 32626831 -39527051 - FLAM_C SINE Alu 0 143 5 267 231 92 0 chr20 32626836 32626901 -39526981 + MIR SINE MIR 60 130 -78 2204 121 0 7 chr20 32626904 32627209 -39526673 - AluSx SINE Alu -9 303 1 1440 153 21 59 chr20 32627233 32627521 -39526361 + AluJo SINE Alu 36 312 0 241 248 19 105 chr20 32627683 32627788 -39526094 + L2 LINE L2 3177 3272 0 308 281 237 0 chr20 32627792 32627931 -39525951 - MIR SINE MIR -71 191 20 482 345 46 0 chr20 32628055 32628293 -39525589 - MIR SINE MIR -11 251 3 193 288 83 91 chr20 32628355 32628430 -39525452 - MIR SINE MIR -117 145 70 1755 177 0 20 chr20 32628430 32628729 -39525153 + AluJb SINE Alu 9 301 -11 193 288 83 91 chr20 32628729 32628785 -39525097 - MIR SINE MIR -192 70 15 182 250 91 0 chr20 32630050 32630094 -39523788 - L2 LINE L2 -15 3257 3210 * 1002 252 9 9 chr20 32630061 32630283 -39523599 - MIR SINE MIR -24 238 17 345 284 65 65 chr20 32630632 32630801 -39523081 - L3 LINE CR1 -99 1478 1310 398 175 26 143 chr20 32630978 32631018 -39522864 + MIR SINE MIR 127 170 -92 2318 113 0 7 chr20 32631018 32631319 -39522563 - AluSx SINE Alu -13 299 1 398 175 26 143 chr20 32631319 32631432 -39522450 + MIR SINE MIR 170 262 0 189 314 157 43 chr20 32631504 32631714 -39522168 + L2 LINE L2 2866 3099 -173 273 250 113 106 chr20 32632126 32632286 -39521596 + MIR3 SINE MIR 21 181 -27 192 262 0 49 chr20 32632830 32632891 -39520991 - MIR SINE MIR -134 74 17 220 247 108 32 chr20 32633198 32633291 -39520591 - MIR SINE MIR -72 136 37 * 377 360 58 0 chr20 32633287 32633459 -39520423 + MIR SINE MIR 30 211 -51 2022 104 0 75 chr20 32633509 32633816 -39520066 - AluSx SINE Alu -28 284 1 305 276 89 24 chr20 32633926 32634049 -39519833 - MIR SINE MIR -64 198 68 1393 216 122 59 chr20 32634499 32635202 -39518680 - L2 LINE L2 0 3313 2547 1466 203 37 7 chr20 32635202 32635473 -39518409 + AluJb SINE Alu 1 279 -33 1393 216 122 59 chr20 32635473 32635547 -39518335 - L2 LINE L2 -766 2547 2479 233 284 119 0 chr20 32635525 32635634 -39518248 + MIR3 SINE MIR 76 197 -11 * 180 97 0 0 chr20 32635960 32635991 -39517891 + (ACTG)n Simple_repeat Simple_repeat 4 34 0 190 236 55 0 chr20 32636165 32636220 -39517662 - MIR3 SINE MIR 0 208 151 1874 159 0 30 chr20 32636287 32636589 -39517293 - AluJb SINE Alu -19 293 1 1363 262 159 17 chr20 32636691 32637321 -39516561 + L2 LINE L2 2458 3227 -86 2574 80 0 0 chr20 32637321 32637634 -39516248 + AluSq SINE Alu 1 313 0 1363 262 159 17 chr20 32637634 32637736 -39516146 + L2 LINE L2 3227 3313 0 217 237 119 0 chr20 32637853 32637912 -39515970 - MIR3 SINE MIR -31 177 112 2482 77 6 10 chr20 32638955 32639267 -39514615 + AluY SINE Alu 1 311 0 457 304 31 12 chr20 32639395 32639556 -39514326 + MIR3 SINE MIR 40 203 -5 392 226 23 58 chr20 32639588 32639730 -39514152 + MIR SINE MIR 2 140 -68 353 258 92 25 chr20 32640023 32640143 -39513739 - MIR SINE MIR -115 147 20 313 344 74 6 chr20 32640696 32640859 -39513023 + MIR SINE MIR 15 188 -74 685 192 0 8 chr20 32640871 32640991 -39512891 + FLAM_C SINE Alu 2 120 -23 207 0 0 0 chr20 32640991 32641014 -39512868 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 204 200 0 0 chr20 32641028 32641063 -39512819 + L2 LINE L2 3261 3295 -18 2097 72 6 90 chr20 32641204 32641536 -39512346 + AluSc SINE Alu 1 304 -5 200 214 192 26 chr20 32641579 32641704 -39512178 + MIR SINE MIR 21 165 -43 519 206 217 33 chr20 32641734 32641918 -39511964 + MIR SINE MIR 19 236 -26 2219 128 3 3 chr20 32641996 32642345 -39511537 + AluSx SINE Alu 1 349 0 782 237 43 39 chr20 32642443 32642722 -39511160 + L1MC4a LINE L1 5587 5866 -1942 852 157 0 0 chr20 32642930 32643051 -39510831 + FLAM_C SINE Alu 1 121 -22 281 153 0 17 chr20 32643061 32643120 -39510762 + GA-rich Low_complexity Low_complexity 4 61 0 249 197 0 45 chr20 32643157 32643223 -39510659 + G-rich Low_complexity Low_complexity 2 64 0 1055 180 10 5 chr20 32643247 32643441 -39510441 - AluSx SINE Alu -117 195 1 582 239 0 22 chr20 32643443 32643577 -39510305 - AluJo/FLAM SINE Alu -171 131 1 2294 107 0 3 chr20 32643593 32643891 -39509991 - AluSx SINE Alu -15 297 1 2298 100 7 0 chr20 32643897 32644196 -39509686 - AluSx SINE Alu -11 301 1 2481 76 0 7 chr20 32644460 32644764 -39509118 + AluSp SINE Alu 2 303 -10 1608 184 16 42 chr20 32644807 32645117 -39508765 - AluJb SINE Alu -10 302 1 412 195 119 25 chr20 32645127 32645286 -39508596 - L1MC5 LINE L1 -33 7928 7755 1175 138 0 6 chr20 32645300 32645467 -39508415 - AluSg/x SINE Alu -16 294 129 2405 78 7 13 chr20 32645597 32645905 -39507977 + AluSx SINE Alu 7 312 0 1832 117 4 4 chr20 32645995 32646291 -39507591 + AluSx SINE Alu 42 337 0 293 138 0 92 chr20 32646294 32646359 -39507523 + AluSg/x SINE Alu 135 193 -107 1011 279 113 19 chr20 32646359 32646754 -39507128 + L1ME3A LINE L1 5214 5571 -599 1036 169 11 11 chr20 32646754 32646943 -39506939 + MER5A DNA MER1_type 1 189 0 1011 279 113 19 chr20 32646943 32647207 -39506675 + L1ME3A LINE L1 5571 5937 -233 2245 103 10 16 chr20 32647216 32647351 -39506531 + AluSg SINE Alu 1 135 -175 2157 109 0 7 chr20 32647351 32647645 -39506237 + AluSg SINE Alu 1 292 -18 2245 103 10 16 chr20 32647645 32647821 -39506061 + AluSg SINE Alu 135 310 0 26 50 0 0 chr20 32647865 32647905 -39505977 + AT_rich Low_complexity Low_complexity 1 40 0 1420 179 101 15 chr20 32647908 32648176 -39505706 + AluJo SINE Alu 1 291 -21 1831 158 10 17 chr20 32648253 32648551 -39505331 - AluJo SINE Alu -10 302 7 590 276 64 60 chr20 32649341 32649520 -39504362 - MIR SINE MIR -1 261 79 602 180 74 0 chr20 32649520 32649642 -39504240 + FLAM_C SINE Alu 2 132 -1 590 276 64 60 chr20 32649642 32649712 -39504170 - MIR SINE MIR -183 79 11 1369 258 157 21 chr20 32649723 32650173 -39503709 + L2 LINE L2 2395 2782 -531 1485 182 81 27 chr20 32650173 32650469 -39503413 - AluJo SINE Alu 0 312 1 1369 258 157 21 chr20 32650469 32650672 -39503210 + L2 LINE L2 2782 2956 -357 849 169 0 0 chr20 32650672 32650802 -39503080 - FLAM_C SINE Alu -3 130 1 1369 258 157 21 chr20 32650802 32650955 -39502927 + L2 LINE L2 2956 3313 0 907 172 0 69 chr20 32651352 32651496 -39502386 + AluJo SINE Alu 1 133 -179 2335 97 17 0 chr20 32651496 32651795 -39502087 + AluSx SINE Alu 1 304 -8 907 172 0 69 chr20 32651795 32651824 -39502058 + AluJo SINE Alu 133 162 -150 246 354 77 0 chr20 32651829 32651959 -39501923 + MIR SINE MIR 117 256 -6 2495 74 0 0 chr20 32652161 32652459 -39501423 - AluY SINE Alu -13 298 1 439 260 10 0 chr20 32652462 32652566 -39501316 + MIR SINE MIR 96 200 -62 2353 112 0 0 chr20 32652615 32652910 -39500972 - AluSx SINE Alu -17 295 1 307 217 33 0 chr20 32652912 32652972 -39500910 + L2 LINE L2 2691 2752 -562 1608 196 28 11 chr20 32652973 32653258 -39500624 - AluJo SINE Alu -22 290 1 1964 166 7 3 chr20 32653260 32653562 -39500320 - AluJb SINE Alu -9 303 1 522 321 69 26 chr20 32654359 32654603 -39499279 + MIR SINE MIR 6 257 -5 617 288 33 42 chr20 32654754 32654966 -39498916 + L2 LINE L2 3104 3313 0 2352 82 3 3 chr20 32655782 32656074 -39497808 - AluSc SINE Alu -17 292 1 233 229 0 121 chr20 32656397 32656480 -39497402 + MIR SINE MIR 172 244 -18 1076 293 83 36 chr20 32656573 32657074 -39496808 - L2 LINE L2 -4 3309 2779 1712 149 3 70 chr20 32657074 32657229 -39496653 + AluSg SINE Alu 2 127 -183 1962 134 7 0 chr20 32657229 32657521 -39496361 - AluSp SINE Alu -6 307 14 1712 149 3 70 chr20 32657521 32657681 -39496201 + AluSg SINE Alu 127 296 -14 1076 293 83 36 chr20 32657681 32657756 -39496126 - L2 LINE L2 -534 2779 2709 2112 119 7 10 chr20 32657758 32658061 -39495821 - AluSq SINE Alu -11 302 1 1122 83 0 0 chr20 32658064 32658197 -39495685 - AluSq/x SINE Alu -179 133 1 2307 106 0 3 chr20 32658209 32658510 -39495372 - AluSx SINE Alu -12 300 1 2325 103 3 0 chr20 32658516 32658816 -39495066 - AluSx SINE Alu -11 301 1 2339 85 10 3 chr20 32658823 32659118 -39494764 - AluSg SINE Alu -13 297 1 213 157 0 129 chr20 32659150 32659220 -39494662 + MIR3 SINE MIR 145 205 -3 235 287 169 29 chr20 32659604 32659740 -39494142 - L2 LINE L2 -2 3270 3116 628 241 175 6 chr20 32659805 32659971 -39493911 + MIR SINE MIR 29 222 -40 679 281 23 6 chr20 32660051 32660222 -39493660 - MIR SINE MIR -74 188 15 185 256 0 0 chr20 32660250 32660289 -39493593 + L2 LINE L2 3214 3252 -20 239 211 26 66 chr20 32661103 32661179 -39492703 - MIR SINE MIR -3 259 187 346 233 129 52 chr20 32661291 32661407 -39492475 - MIR SINE MIR -70 192 68 286 315 83 33 chr20 32661515 32661696 -39492186 - MIR SINE MIR -45 217 28 253 284 15 0 chr20 32661727 32661794 -39492088 - MIR SINE MIR -16 246 179 362 281 56 104 chr20 32662116 32662215 -39491667 - MIR SINE MIR -16 246 144 2549 80 3 0 chr20 32662215 32662527 -39491355 + AluSp SINE Alu 1 313 0 362 281 56 104 chr20 32662527 32662676 -39491206 - MIR SINE MIR -118 144 10 1946 141 0 24 chr20 32664097 32664270 -39489612 - AluSx SINE Alu -29 283 118 2600 50 0 25 chr20 32664270 32664588 -39489294 + AluY SINE Alu 1 310 -1 1946 141 0 24 chr20 32664588 32664704 -39489178 - AluSx SINE Alu -194 118 1 574 225 70 35 chr20 32664828 32664970 -39488912 - L2 LINE L2 -2 3311 3165 326 272 0 29 chr20 32664977 32665080 -39488802 - L2 LINE L2 -272 3041 2942 181 275 0 0 chr20 32665072 32665112 -39488770 - MIR SINE MIR -84 178 139 * 229 186 23 0 chr20 32665113 32665156 -39488726 - MIR SINE MIR -102 160 117 353 329 123 41 chr20 32665689 32665908 -39487974 + MIR SINE MIR 26 262 0 214 299 93 21 chr20 32666233 32666330 -39487552 + L2 LINE L2 3168 3271 -1 208 248 277 0 chr20 32666411 32666512 -39487370 + MIR SINE MIR 37 165 -97 422 275 85 34 chr20 32666592 32666746 -39487136 + MIR SINE MIR 22 185 -61 234 338 0 13 chr20 32666749 32666826 -39487056 + MIR SINE MIR 16 91 -171 1095 188 15 5 chr20 32666998 32667200 -39486682 + MIR SINE MIR 59 262 0 257 240 0 0 chr20 32668520 32668578 -39485304 - MIR SINE MIR -97 111 53 316 257 40 51 chr20 32668578 32668736 -39485146 + MIR SINE MIR 58 212 -50 331 278 83 9 chr20 32668942 32669050 -39484832 - MIR3 SINE MIR -45 163 48 193 271 248 23 chr20 32669267 32669396 -39484486 - MIR SINE MIR -60 202 45 413 247 275 64 chr20 32669598 32669711 -39484171 + L2 LINE L2 2550 2638 -675 2270 75 7 0 chr20 32669711 32670006 -39483876 + AluY SINE Alu 1 297 -14 413 247 275 64 chr20 32670006 32670291 -39483591 + L2 LINE L2 2638 3026 -287 1094 155 130 5 chr20 32670309 32670516 -39483366 + MER34C LTR ERV1 1 233 -352 895 140 0 43 chr20 32670550 32670714 -39483168 - AluJb SINE Alu -12 300 144 525 186 93 73 chr20 32670781 32670985 -39482897 + LTR48 LTR ERV1 580 787 0 793 230 84 54 chr20 32670985 32671246 -39482636 + L2 LINE L2 3045 3313 0 222 341 71 0 chr20 32671334 32671419 -39482463 - L2 LINE L2 -23 3249 3159 436 263 102 38 chr20 32671428 32671614 -39482268 - L3 LINE CR1 -176 1401 1204 2374 85 3 0 chr20 32673092 32673398 -39480484 + AluSp SINE Alu 1 307 -6 203 343 10 40 chr20 32673662 32673761 -39480121 + MIR SINE MIR 11 106 -156 265 299 124 0 chr20 32673846 32673943 -39479939 + L2 LINE L2 3204 3312 -1 239 233 0 0 chr20 32673942 32673985 -39479897 + L2 LINE L2 3210 3252 -20 * 360 300 0 11 chr20 32675395 32675485 -39478397 - MIR SINE MIR -62 146 58 224 77 26 0 chr20 32678824 32678863 -39475019 + (CAGT)n Simple_repeat Simple_repeat 4 43 0 514 213 39 31 chr20 32678947 32679074 -39474808 + MIR SINE MIR 91 218 -44 1602 55 0 5 chr20 32679074 32679276 -39474606 + AluSx SINE Alu 1 201 -111 339 249 78 78 chr20 32679314 32679519 -39474363 - L1MC/D LINE L1 -2288 5520 5316 2118 114 0 13 chr20 32679549 32679865 -39474017 - AluSx SINE Alu 0 312 1 1722 152 20 3 chr20 32679865 32680162 -39473720 - AluJb SINE Alu -10 302 1 2243 84 3 0 chr20 32680172 32680469 -39473413 - AluSg SINE Alu -12 298 1 973 132 63 181 chr20 32681048 32681396 -39472486 - AluYb8 SINE Alu 0 308 2 2046 128 0 0 chr20 32681441 32681737 -39472145 + AluSg SINE Alu 1 296 -14 1518 160 3 69 chr20 32681748 32682066 -39471816 + AluJb SINE Alu 1 297 -15 228 235 94 0 chr20 32682068 32682153 -39471729 + L1ME3A LINE L1 5853 5945 -225 509 255 21 28 chr20 32682169 32682310 -39471572 + MLT1F1 LTR MaLR 1 140 -402 1367 126 19 5 chr20 32682336 32682550 -39471332 - AluJb SINE Alu -11 301 85 2265 89 0 16 chr20 32682594 32682907 -39470975 + AluY SINE Alu 1 308 -3 812 146 230 34 chr20 32682912 32683192 -39470690 + MLT1F1 LTR MaLR 163 560 -7 1701 166 28 0 chr20 32683256 32683546 -39470336 + AluSx SINE Alu 1 298 -14 2169 112 0 6 chr20 32683682 32683994 -39469888 + AluSg SINE Alu 1 310 0 771 159 0 29 chr20 32684242 32684380 -39469502 - L1PB3 LINE L1 -13 6141 6008 1979 117 31 3 chr20 32684420 32684711 -39469171 + AluSx SINE Alu 1 299 -13 1325 147 4 38 chr20 32684844 32685082 -39468800 - AluJo SINE Alu -10 302 73 2274 88 3 0 chr20 32685123 32685419 -39468463 + AluSx SINE Alu 1 297 -15 2380 68 0 0 chr20 32685420 32685716 -39468166 + AluY SINE Alu 1 296 -15 1503 191 93 31 chr20 32685720 32686075 -39467807 - LTR48 LTR ERV1 -410 377 1 698 173 0 0 chr20 32686157 32686267 -39467615 - AluJb SINE Alu -11 301 192 863 209 0 0 chr20 32686546 32686709 -39467173 - AluJb SINE Alu -17 295 133 2221 81 7 0 chr20 32686817 32687114 -39466768 + AluSx SINE Alu 3 301 -11 2163 111 7 0 chr20 32687166 32687473 -39466409 - AluSq SINE Alu -4 309 1 863 300 21 8 chr20 32687639 32687882 -39466000 + MIR SINE MIR 13 258 -4 2220 69 7 0 chr20 32687969 32688257 -39465625 - AluSq SINE Alu -23 290 1 365 260 136 30 chr20 32688269 32688438 -39465444 - L1MC4a LINE L1 -1926 5882 5696 210 266 47 0 chr20 32688498 32688562 -39465320 + MIR3 SINE MIR 142 208 0 189 74 0 0 chr20 32688724 32688751 -39465131 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 753 212 12 35 chr20 32689027 32689197 -39464685 + L2 LINE L2 3129 3294 -19 2009 117 17 0 chr20 32689314 32689614 -39464268 + AluSq SINE Alu 1 305 -8 955 165 0 6 chr20 32689614 32689778 -39464104 + AluSg/x SINE Alu 134 296 -16 382 211 119 0 chr20 32689828 32689954 -39463928 - L1MC4a LINE L1 -657 5507 5366 1668 136 0 78 chr20 32689955 32690137 -39463745 - AluJb SINE Alu -6 306 160 2186 114 0 0 chr20 32690137 32690445 -39463437 - AluSg SINE Alu -2 308 1 1668 136 0 78 chr20 32690445 32690594 -39463288 - AluJb SINE Alu -152 160 1 1546 176 75 4 chr20 32690624 32690902 -39462980 - AluJo SINE Alu -3 299 2 2247 86 3 0 chr20 32690985 32691287 -39462595 - AluSp SINE Alu -9 304 2 2412 51 0 7 chr20 32691295 32691591 -39462291 - AluY SINE Alu -17 294 1 823 155 20 7 chr20 32691620 32691768 -39462114 + AluJb SINE Alu 148 297 -15 866 122 0 0 chr20 32691798 32691921 -39461961 - AluSg/x SINE Alu -21 291 169 558 197 72 54 chr20 32691948 32692171 -39461711 - L1MC5 LINE L1 -48 7913 7687 1782 125 40 3 chr20 32692178 32692475 -39461407 + AluSq SINE Alu 6 313 0 310 143 95 12 chr20 32692503 32692587 -39461295 - L1MC5 LINE L1 -491 7470 7380 2164 92 0 16 chr20 32692770 32693073 -39460809 - AluSx SINE Alu -14 298 1 530 222 0 0 chr20 32693185 32693293 -39460589 - FLAM_A SINE Alu -34 108 1 284 321 46 9 chr20 32693326 32693435 -39460447 + MIR SINE MIR 40 152 -110 267 273 68 53 chr20 32694387 32694519 -39459363 - MIR SINE MIR -42 220 87 197 309 18 0 chr20 32695545 32695600 -39458282 + L2 LINE L2 3250 3305 -8 2157 111 0 13 chr20 32696018 32696197 -39457685 - AluSx SINE Alu 0 312 137 2140 103 0 10 chr20 32696197 32696497 -39457385 - AluSc SINE Alu -12 297 1 2157 111 0 13 chr20 32696497 32696633 -39457249 - AluSx SINE Alu -175 137 1 2161 92 7 13 chr20 32696893 32697196 -39456686 - AluSx SINE Alu -11 301 1 404 219 136 16 chr20 32697439 32697583 -39456299 - L1ME4a LINE L1 -12 6109 5984 1959 143 3 63 chr20 32697583 32697651 -39456231 + MER2 DNA MER2_type 2 73 -271 1899 124 38 3 chr20 32697651 32697941 -39455941 + AluSx SINE Alu 1 300 -12 1959 143 3 63 chr20 32697941 32698122 -39455760 + MER2 DNA MER2_type 73 263 -81 1510 169 10 34 chr20 32698122 32698418 -39455464 + AluJo SINE Alu 1 289 -23 1959 143 3 63 chr20 32698418 32698445 -39455437 + MER2 DNA MER2_type 263 290 -54 2209 85 20 0 chr20 32698445 32698739 -39455143 - AluSp SINE Alu -13 300 1 1959 143 3 63 chr20 32698739 32698825 -39455057 + MER2 DNA MER2_type 290 344 0 404 219 136 16 chr20 32698825 32698868 -39455014 - L1ME4a LINE L1 -137 5984 5948 2204 68 13 13 chr20 32698868 32699175 -39454707 - AluSg SINE Alu -3 307 1 404 219 136 16 chr20 32699175 32699228 -39454654 - L1ME4a LINE L1 -173 5948 5839 1076 152 0 37 chr20 32699232 32699423 -39454459 - AluJb SINE Alu 0 312 129 266 244 52 96 chr20 32699487 32699522 -39454360 - L1ME4a LINE L1 -485 5636 5601 2127 92 10 13 chr20 32699522 32699825 -39454057 + AluSq SINE Alu 1 302 -11 266 244 52 96 chr20 32699825 32699904 -39453978 - L1ME4a LINE L1 -520 5601 5527 2130 104 7 0 chr20 32700047 32700336 -39453546 - AluSx SINE Alu -11 301 11 2078 94 13 3 chr20 32701837 32702136 -39451746 - AluSg SINE Alu -8 302 1 309 109 0 0 chr20 32702155 32702201 -39451681 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 180 0 0 0 chr20 32702488 32702508 -39451374 + (T)n Simple_repeat Simple_repeat 1 20 0 387 278 60 103 chr20 32703370 32703622 -39450260 + MIR SINE MIR 21 261 -1 2447 53 0 3 chr20 32703665 32703964 -39449918 - AluY SINE Alu -13 298 1 1027 270 25 0 chr20 32703991 32704232 -39449650 + MIR SINE MIR 13 259 -3 2175 94 7 3 chr20 32704232 32704530 -39449352 + AluSq SINE Alu 1 299 -14 38 22 0 0 chr20 32704625 32704670 -39449212 + AT_rich Low_complexity Low_complexity 1 45 0 1476 92 10 0 chr20 32704670 32704877 -39449005 - AluSg/x SINE Alu -25 287 79 2213 85 14 0 chr20 32704877 32705171 -39448711 - AluSp SINE Alu -14 299 2 387 0 0 0 chr20 32705171 32705214 -39448668 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1333 90 63 11 chr20 32705214 32705403 -39448479 - AluSg/x SINE Alu -30 280 82 198 0 0 0 chr20 32705615 32705637 -39448245 + (TTG)n Simple_repeat Simple_repeat 3 24 0 915 179 0 0 chr20 32705644 32705795 -39448087 - AluJo/FRAM SINE Alu -30 282 132 416 176 49 39 chr20 32705797 32705899 -39447983 + FLAM_A SINE Alu 40 142 0 2187 104 0 0 chr20 32706472 32706761 -39447121 - AluSq SINE Alu -24 289 1 316 277 60 76 chr20 32706916 32707100 -39446782 - MLT1J LTR MaLR -203 308 128 2137 100 3 7 chr20 32707332 32707632 -39446250 - AluY SINE Alu -12 299 1 448 296 107 22 chr20 32707948 32708178 -39445704 + MIR SINE MIR 3 252 -10 2242 100 0 0 chr20 32708462 32708772 -39445110 + AluSx SINE Alu 1 310 -2 1814 109 67 0 chr20 32708815 32709099 -39444783 - AluSx SINE Alu -9 303 1 435 243 201 19 chr20 32709353 32709567 -39444315 + L1ME4a LINE L1 5615 5867 -254 2014 119 0 3 chr20 32709663 32709966 -39443916 - AluY SINE Alu -9 302 1 1050 70 0 0 chr20 32709969 32710097 -39443785 - AluSq/x SINE Alu -179 133 6 1861 109 67 0 chr20 32710216 32710499 -39443383 + AluSx SINE Alu 1 302 -10 324 282 127 50 chr20 32710813 32710870 -39443012 - L2 LINE L2 -8 3305 3254 219 36 0 0 chr20 32710870 32710898 -39442984 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 324 282 127 50 chr20 32710898 32711021 -39442861 - L2 LINE L2 -59 3254 3111 30 48 0 16 chr20 32711297 32711330 -39442552 + AT_rich Low_complexity Low_complexity 1 34 -27 2105 118 0 9 chr20 32711330 32711645 -39442237 - AluSq SINE Alu -1 312 1 30 48 0 16 chr20 32711645 32711673 -39442209 + AT_rich Low_complexity Low_complexity 34 61 0 615 186 51 0 chr20 32711808 32711926 -39441956 - FLAM_C SINE Alu -9 124 1 693 211 120 6 chr20 32712652 32712827 -39441055 - L1MD2 LINE L1 -133 6226 6032 2053 113 10 3 chr20 32712838 32713138 -39440744 - AluSx SINE Alu -10 302 1 2139 106 3 10 chr20 32714105 32714416 -39439466 - AluSc SINE Alu 0 309 1 1274 178 116 29 chr20 32715101 32715376 -39438506 - AluJo SINE Alu -1 301 3 326 0 0 0 chr20 32715549 32715584 -39438298 + U2 snRNA snRNA 1 35 -153 598 188 46 30 chr20 32715698 32715905 -39437977 - L1MB7 LINE L1 0 6184 5981 2193 103 0 3 chr20 32715916 32716218 -39437664 - AluSg SINE Alu -9 301 1 3883 136 55 15 chr20 32716220 32717054 -39436828 - L1MA5 LINE L1 -394 5906 5047 2095 124 0 6 chr20 32717054 32717368 -39436514 - AluSx SINE Alu 0 312 1 3883 136 55 15 chr20 32717368 32717518 -39436364 - L1MA5 LINE L1 -1253 5047 4904 491 196 0 21 chr20 32717527 32717624 -39436258 - FLAM_C SINE Alu -12 131 37 1733 150 0 0 chr20 32717624 32717904 -39435978 - L1MA5 LINE L1 -1226 4920 4641 2288 105 0 0 chr20 32717904 32718198 -39435684 - AluSq SINE Alu -19 294 1 600 233 76 6 chr20 32718229 32718401 -39435481 - L1MEc LINE L1 -3549 2666 2483 262 0 0 50 chr20 32718403 32718443 -39435439 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2313 99 0 3 chr20 32718456 32718749 -39435133 + AluSg SINE Alu 1 292 -18 308 288 2 9 chr20 32718750 32718856 -39435026 - L1MC4 LINE L1 -1340 6702 6614 251 294 0 33 chr20 32718777 32718869 -39435013 + L1MC4 LINE L1 6614 6702 -1340 * 1935 147 7 0 chr20 32718901 32719186 -39434696 - AluJb SINE Alu -25 287 1 581 231 192 14 chr20 32719189 32719397 -39434485 - L1MEc LINE L1 -3874 2522 2278 1089 169 0 5 chr20 32719660 32719844 -39434038 - AluJb SINE Alu 0 312 130 752 148 7 90 chr20 32719896 32720051 -39433831 + FLAM_C SINE Alu 2 143 0 586 191 0 0 chr20 32720188 32720298 -39433584 - FLAM_A SINE Alu -2 140 31 983 299 37 8 chr20 32720639 32721041 -39432841 - HAL1 LINE L1 -721 1786 1373 243 226 32 0 chr20 32721078 32721140 -39432742 - Charlie8 DNA MER1_type -1641 776 713 378 0 0 0 chr20 32721173 32721215 -39432667 + (TG)n Simple_repeat Simple_repeat 2 43 0 2369 85 3 10 chr20 32721514 32721820 -39432062 - AluSq SINE Alu -9 304 1 226 278 139 21 chr20 32721878 32722022 -39431860 - MIR SINE MIR -77 185 25 970 151 23 47 chr20 32722089 32722261 -39431621 - FRAM SINE Alu -12 164 1 1815 172 7 10 chr20 32722268 32722571 -39431311 - AluJb SINE Alu -10 302 1 225 254 0 56 chr20 32722572 32722643 -39431239 - L1MEc LINE L1 -5674 531 465 1858 168 0 7 chr20 32722654 32722951 -39430931 - AluJb SINE Alu -16 296 2 2300 60 7 33 chr20 32722962 32723263 -39430619 - AluY SINE Alu -18 293 1 582 259 92 43 chr20 32723265 32723654 -39430228 + L1P1 LINE L1 5083 5493 -662 * 634 247 39 18 chr20 32723622 32723835 -39430047 + L1ME3A LINE L1 5709 5932 -230 838 30 0 0 chr20 32723837 32723937 -39429945 + L1PA3 LINE L1 6056 6155 0 2522 52 0 20 chr20 32724037 32724342 -39429540 - AluY SINE Alu -12 299 1 1602 196 3 10 chr20 32724522 32724818 -39429064 - AluJo SINE Alu -18 294 1 23 0 0 0 chr20 32725019 32725042 -39428840 + AT_rich Low_complexity Low_complexity 1 23 0 276 292 79 75 chr20 32725693 32725998 -39427884 - MLT1J LTR MaLR -203 308 3 28 0 0 0 chr20 32726555 32726583 -39427299 + AT_rich Low_complexity Low_complexity 1 28 0 1624 171 10 48 chr20 32726583 32726738 -39427144 - AluJb SINE Alu -25 287 147 2341 110 0 0 chr20 32726738 32727039 -39426843 - AluSx SINE Alu -11 301 1 1624 171 10 48 chr20 32727039 32727175 -39426707 - AluJb SINE Alu -165 147 7 398 281 129 13 chr20 32727466 32727690 -39426192 - L1ME LINE L1 -338 5783 5534 2318 99 6 29 chr20 32727690 32727862 -39426020 - AluSx SINE Alu -7 305 142 2316 111 3 0 chr20 32727862 32728169 -39425713 - AluSx SINE Alu -4 308 1 2318 99 6 29 chr20 32728169 32728308 -39425574 - AluSx SINE Alu -170 142 1 1115 190 67 33 chr20 32728435 32728589 -39425293 - L1MA7 LINE L1 0 6291 6144 2245 107 10 0 chr20 32728589 32728887 -39424995 - AluSq SINE Alu -12 301 1 1115 190 67 33 chr20 32728887 32729032 -39424850 - L1MA7 LINE L1 -147 6144 5982 339 276 99 50 chr20 32729214 32729395 -39424487 - MIR SINE MIR -16 246 57 749 211 0 0 chr20 32729489 32729622 -39424260 - FLAM_A SINE Alu 0 133 1 2224 95 7 0 chr20 32729665 32729976 -39423906 - AluSx SINE Alu 0 312 1 2208 129 3 0 chr20 32730083 32730394 -39423488 - AluSx SINE Alu 0 312 1 2973 13 0 0 chr20 32730780 32731098 -39422784 - AluYb8 SINE Alu 0 318 1 2278 111 0 3 chr20 32731238 32731545 -39422337 - AluSq SINE Alu -7 306 1 2312 102 7 0 chr20 32732499 32732793 -39421089 - AluSq SINE Alu -17 296 1 205 290 139 23 chr20 32734358 32734617 -39419265 - L2 LINE L2 -1619 1695 1407 2056 121 0 24 chr20 32734773 32735070 -39418812 - AluSx SINE Alu -22 290 1 21 0 0 0 chr20 32735079 32735100 -39418782 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr20 32735613 32735635 -39418247 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1720 181 0 14 chr20 32735638 32735930 -39417952 - AluJo SINE Alu -12 300 13 2431 64 0 29 chr20 32735972 32736283 -39417599 - AluY SINE Alu -9 302 1 1955 147 10 7 chr20 32736378 32736671 -39417211 + AluJb SINE Alu 1 294 -18 1715 130 63 19 chr20 32737324 32737593 -39416289 + AluJb SINE Alu 1 281 -31 462 36 0 0 chr20 32737595 32737651 -39416231 + (CA)n Simple_repeat Simple_repeat 1 56 0 2287 112 3 0 chr20 32737957 32738269 -39415613 - AluSq SINE Alu 0 313 1 779 221 84 4 chr20 32739008 32739234 -39414648 - MIR SINE MIR -1 261 18 2374 91 0 0 chr20 32740209 32740516 -39413366 - AluSq SINE Alu -6 307 1 418 214 107 25 chr20 32740578 32740737 -39413145 + MER113 DNA MER1_type? 21 192 -329 917 214 41 37 chr20 32740744 32740987 -39412895 - MIR SINE MIR 0 262 19 1913 148 7 26 chr20 32741119 32741422 -39412460 - AluSx SINE Alu -15 297 1 343 301 98 7 chr20 32741789 32741932 -39411950 - MIR SINE MIR 0 262 107 2331 134 166 60 chr20 32742198 32742795 -39411087 - MER4A LTR ERV1 -4 660 1 2375 82 7 10 chr20 32742853 32743158 -39410724 + AluSx SINE Alu 1 304 -8 509 271 100 40 chr20 32743796 32744047 -39409835 + L2 LINE L2 3022 3287 -26 218 361 82 10 chr20 32744082 32744179 -39409703 - L2 LINE L2 -40 3232 3129 252 328 94 16 chr20 32744614 32744742 -39409140 - MIR3 SINE MIR -18 190 53 309 291 55 16 chr20 32744946 32745073 -39408809 + MARNA DNA Mariner 31 162 -424 * 646 297 104 34 chr20 32744959 32745373 -39408509 - MARNA DNA Mariner -41 545 103 348 333 91 67 chr20 32745431 32745881 -39408001 - L2 LINE L2 -3 3269 2809 2519 58 0 3 chr20 32746007 32746302 -39407580 - AluY SINE Alu -17 294 1 1541 169 110 0 chr20 32746825 32747098 -39406784 + AluJb SINE Alu 1 303 -9 870 119 8 0 chr20 32747248 32747366 -39406516 + FLAM_C SINE Alu 1 119 -24 278 316 0 0 chr20 32748903 32748982 -39404900 - MIR SINE MIR -88 120 42 903 231 14 19 chr20 32749391 32749474 -39404408 - MER58C DNA MER1_type -2205 215 133 411 21 0 0 chr20 32749474 32749522 -39404360 + (TG)n Simple_repeat Simple_repeat 2 49 0 903 231 14 19 chr20 32749522 32749533 -39404349 - MER58C DNA MER1_type -2287 133 123 2261 94 0 3 chr20 32749533 32749839 -39404043 - AluY SINE Alu 0 305 1 903 231 14 19 chr20 32749839 32749854 -39404028 - MER58C DNA MER1_type -2297 123 109 2269 112 0 0 chr20 32749854 32750148 -39403734 - AluSx SINE Alu -14 298 5 903 231 14 19 chr20 32750148 32750251 -39403631 - MER58C DNA MER1_type -2311 109 1 1230 223 99 85 chr20 32750850 32751519 -39402363 - L1MC5 LINE L1 -49 7912 7235 988 85 0 0 chr20 32751569 32751710 -39402172 - L1MA5A LINE L1 -2 6295 6155 764 22 0 0 chr20 32751741 32751832 -39402050 + L1PA4 LINE L1 6063 6153 -2 827 118 0 39 chr20 32752635 32752762 -39401120 + FLAM_C SINE Alu 3 124 -9 22 35 0 0 chr20 32753667 32753696 -39400186 + AT_rich Low_complexity Low_complexity 1 29 0 935 157 45 122 chr20 32754021 32754333 -39399549 + L1MA8 LINE L1 6003 6290 -1 2302 88 13 7 chr20 32754336 32754643 -39399239 + AluSx SINE Alu 1 309 -3 720 188 0 29 chr20 32754683 32754821 -39399061 + FLAM_C SINE Alu 1 134 -9 2452 57 0 17 chr20 32756615 32756912 -39396970 - AluY SINE Alu -19 292 1 2253 93 10 3 chr20 32757057 32757347 -39396535 - AluSx SINE Alu -20 292 1 2453 75 0 0 chr20 32757433 32757727 -39396155 - AluY SINE Alu -17 294 1 339 111 0 0 chr20 32758209 32758254 -39395628 - MER2 DNA MER2_type -300 45 1 452 158 30 40 chr20 32758265 32758366 -39395516 - L2 LINE L2 -46 3267 3168 557 254 32 55 chr20 32758396 32758616 -39395266 - L2 LINE L2 -625 2689 2475 310 145 14 87 chr20 32758884 32758953 -39394929 - L1MEc LINE L1 -6265 131 68 2130 100 38 3 chr20 32759474 32759765 -39394117 - AluSx SINE Alu -11 301 1 2033 106 42 0 chr20 32759907 32760190 -39393692 - AluSp SINE Alu -17 296 2 22 35 0 0 chr20 32760510 32760539 -39393343 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr20 32762022 32762044 -39391838 + AT_rich Low_complexity Low_complexity 1 22 0 357 186 0 0 chr20 32762472 32762542 -39391340 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2381 102 0 0 chr20 32762545 32762849 -39391033 - AluSg SINE Alu -6 304 1 2287 90 0 0 chr20 32763851 32764130 -39389752 + AluSg SINE Alu 1 279 -31 276 30 0 0 chr20 32764133 32764166 -39389716 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 204 238 48 48 chr20 32764241 32764304 -39389578 + MIR SINE MIR 82 144 -118 240 217 163 54 chr20 32764963 32765055 -39388827 + MIR3 SINE MIR 78 179 -29 240 88 0 0 chr20 32765370 32765404 -39388478 + MLT1E2 LTR MaLR 590 623 -3 1899 86 112 11 chr20 32765486 32765753 -39388129 - AluSg SINE Alu -16 294 1 929 206 27 0 chr20 32765913 32766097 -39387785 + MER5A DNA MER1_type 1 189 0 473 226 21 17 chr20 32766404 32766537 -39387345 - MIR SINE MIR -64 144 8 674 251 183 0 chr20 32767573 32767792 -39386090 + MIR SINE MIR 4 262 0 2090 130 0 32 chr20 32768015 32768330 -39385552 + AluSx SINE Alu 1 305 -7 538 262 41 41 chr20 32768376 32768548 -39385334 - MER5B DNA MER1_type 0 178 7 251 256 26 26 chr20 32768689 32768767 -39385115 - MER5A DNA MER1_type -2 187 110 2188 132 0 0 chr20 32768776 32769086 -39384796 - AluSx SINE Alu -2 310 1 1729 167 0 7 chr20 32769430 32769718 -39384164 - AluJb SINE Alu -9 303 18 202 273 327 0 chr20 32770931 32771041 -39382841 + MIR SINE MIR 2 147 -115 193 315 28 37 chr20 32771205 32771313 -39382569 + MIR SINE MIR 153 259 -3 440 270 88 49 chr20 32771396 32771600 -39382282 + MIR SINE MIR 48 259 -3 301 376 98 5 chr20 32772008 32772202 -39381680 + MIR SINE MIR 28 239 -23 608 310 90 10 chr20 32772224 32772424 -39381458 + MIR SINE MIR 47 262 0 319 283 31 44 chr20 32772708 32772934 -39380948 - L1MC4a LINE L1 -1802 6006 5784 796 166 0 43 chr20 32773078 32773217 -39380665 - FLAM_C SINE Alu 0 133 1 219 208 0 57 chr20 32774004 32774057 -39379825 + C-rich Low_complexity Low_complexity 4 53 0 811 203 0 0 chr20 32776638 32776771 -39377111 - FLAM_A SINE Alu 0 133 1 285 268 102 39 chr20 32776814 32776941 -39376941 - MIR SINE MIR -110 152 18 342 303 82 0 chr20 32779335 32779457 -39374425 - L2 LINE L2 -8 3264 3133 353 324 79 23 chr20 32779602 32779818 -39374064 - L2 LINE L2 -147 3125 2898 199 372 0 0 chr20 32779992 32780070 -39373812 + L2 LINE L2 3173 3250 -22 619 231 40 100 chr20 32780102 32780423 -39373459 - L2 LINE L2 -9 3304 3003 369 264 0 56 chr20 32780468 32780593 -39373289 + MER63 DNA MER1_type 13 756 -306 939 308 38 53 chr20 32780614 32781198 -39372684 - L2 LINE L2 -706 2608 2034 207 259 0 0 chr20 32781724 32781778 -39372104 + (TCCA)n Simple_repeat Simple_repeat 2 55 0 246 318 24 48 chr20 32781779 32781905 -39371977 - L2 LINE L2 -1 3312 3190 535 208 0 25 chr20 32782043 32782163 -39371719 - L2 LINE L2 0 3313 3197 2289 95 0 0 chr20 32782241 32782537 -39371345 - AluSx SINE Alu -16 296 1 2236 102 0 7 chr20 32782601 32782906 -39370976 - AluSx SINE Alu -9 303 1 330 273 180 0 chr20 32783159 32783287 -39370595 - L2 LINE L2 -1 3271 3121 640 268 75 26 chr20 32783543 32783808 -39370074 - L2 LINE L2 -638 2676 2399 408 293 100 50 chr20 32784271 32784510 -39369372 - MER102b DNA MER1_type -14 327 77 187 266 64 73 chr20 32784520 32784629 -39369253 - MIR3 SINE MIR -36 172 65 187 291 103 51 chr20 32784603 32784720 -39369162 - L2 LINE L2 -2 3270 3148 425 259 29 43 chr20 32784778 32784917 -39368965 + MIR SINE MIR 33 169 -93 469 259 34 34 chr20 32786124 32786271 -39367611 - MIR SINE MIR -39 223 77 1182 250 70 14 chr20 32787086 32787206 -39366676 - L2 LINE L2 -2 3311 3199 2196 112 7 0 chr20 32787206 32787509 -39366373 - AluSg SINE Alu -5 305 1 1182 250 70 14 chr20 32787509 32787604 -39366278 - L2 LINE L2 -114 3199 3111 1513 169 81 18 chr20 32787604 32787888 -39365994 - AluJo SINE Alu -10 302 1 1182 250 70 14 chr20 32787888 32788225 -39365657 - L2 LINE L2 -202 3111 2724 228 289 35 53 chr20 32789522 32789636 -39364246 + MIR SINE MIR 51 162 -100 * 346 317 10 10 chr20 32789623 32789727 -39364155 - MIR SINE MIR 0 262 159 195 42 0 0 chr20 32789727 32789751 -39364131 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 604 124 0 41 chr20 32789754 32789851 -39364031 - AluSg/x SINE Alu -32 280 188 265 170 57 0 chr20 32789851 32789904 -39363978 - MIR SINE MIR -98 164 109 184 321 0 37 chr20 32789914 32789995 -39363887 + MIR SINE MIR 153 230 -32 375 277 74 1 chr20 32790001 32790123 -39363759 - MIR SINE MIR -62 146 31 613 297 95 22 chr20 32790460 32790692 -39363190 - MIR SINE MIR -1 261 13 347 204 168 0 chr20 32791166 32791279 -39362603 - MIR3 SINE MIR -72 136 5 199 189 0 0 chr20 32791259 32791296 -39362586 + MIR SINE MIR 116 152 -110 * 347 200 29 0 chr20 32791369 32791439 -39362443 - MIR SINE MIR -62 146 75 663 282 97 0 chr20 32792429 32792635 -39361247 - MIR SINE MIR -2 260 35 301 322 163 44 chr20 32792643 32793053 -39360829 - L2 LINE L2 -3 3269 2811 378 233 33 0 chr20 32793307 32793397 -39360485 + MIR SINE MIR 100 192 -70 452 261 314 12 chr20 32793436 32793777 -39360105 - L2 LINE L2 -5 3308 2865 2276 84 3 3 chr20 32793828 32794125 -39359757 - AluSx SINE Alu -15 297 1 492 330 137 17 chr20 32794171 32794522 -39359360 - L2 LINE L2 0 3313 2921 523 237 14 26 chr20 32794936 32795101 -39358781 - MIR SINE MIR -61 147 19 2162 128 0 0 chr20 32795212 32795518 -39358364 - AluSx SINE Alu -6 306 1 855 185 43 22 chr20 32795518 32795702 -39358180 - MIR SINE MIR -6 256 69 206 283 206 72 chr20 32796108 32796288 -39357594 + L3 LINE CR1 1371 1574 -3 283 265 12 0 chr20 32796561 32796644 -39357238 + MIR SINE MIR 62 145 -117 181 365 24 12 chr20 32796914 32796999 -39356883 - MIR SINE MIR -72 136 51 290 149 39 78 chr20 32800591 32800745 -39353137 + (CAGAGA)n Simple_repeat Simple_repeat 5 152 0 798 165 0 0 chr20 32800774 32801042 -39352840 + (CA)n Simple_repeat Simple_repeat 1 268 0 347 0 23 0 chr20 32801161 32801204 -39352678 + (GA)n Simple_repeat Simple_repeat 2 45 0 201 217 0 43 chr20 32801506 32801565 -39352317 + MIR SINE MIR 99 152 -110 431 297 42 17 chr20 32801848 32802020 -39351862 - MIR SINE MIR -63 145 13 340 214 63 111 chr20 32802066 32802192 -39351690 + L2 LINE L2 3193 3312 -1 567 236 163 77 chr20 32804976 32805209 -39348673 + MIR SINE MIR 9 261 -1 283 213 27 13 chr20 32805740 32805815 -39348067 - LTR45 LTR ERV1 0 525 450 211 250 42 42 chr20 32806641 32806713 -39347169 + MIR SINE MIR 60 131 -77 2220 118 0 3 chr20 32806714 32807027 -39346855 - AluSq SINE Alu -1 312 1 2324 74 7 7 chr20 32807247 32807546 -39346336 + AluSq SINE Alu 1 299 -14 241 231 0 19 chr20 32807782 32807834 -39346048 + CT-rich Low_complexity Low_complexity 1 51 0 302 288 136 23 chr20 32807836 32807968 -39345914 - L2 LINE L2 -11 3261 3115 371 354 49 12 chr20 32808041 32808205 -39345677 + L1M4 LINE L1 4927 5096 -1050 1023 127 0 48 chr20 32808216 32808381 -39345501 + AluJb SINE Alu 102 258 -54 1473 137 17 25 chr20 32808381 32808622 -39345260 - AluJb SINE Alu -73 239 1 503 284 131 0 chr20 32808628 32808811 -39345071 - L2 LINE L2 -240 3073 2867 417 300 0 31 chr20 32809012 32809142 -39344740 + MIR SINE MIR 109 234 -28 352 283 26 18 chr20 32809205 32809318 -39344564 + L2 LINE L2 3193 3306 -7 246 355 30 45 chr20 32809320 32809485 -39344397 - L2 LINE L2 -249 3023 2854 3284 205 21 23 chr20 32809485 32810139 -39343743 + MER82 DNA MER2_type 1 653 0 246 355 30 45 chr20 32810139 32810275 -39343607 - L2 LINE L2 -418 2854 2718 288 316 250 0 chr20 32810406 32810542 -39343340 - L2 LINE L2 0 3272 3103 1086 83 7 0 chr20 32810665 32810810 -39343072 - L1PB1 LINE L1 -2 6149 6004 363 309 221 27 chr20 32810810 32811829 -39342053 - L2 LINE L2 -221 3051 1827 263 297 131 23 chr20 32812005 32812042 -39341840 + L2 LINE L2 2686 2718 -554 876 130 15 0 chr20 32812042 32812173 -39341709 - FLAM_C SINE Alu 0 133 1 263 297 131 23 chr20 32812173 32812465 -39341417 + L2 LINE L2 2718 3043 -229 337 294 39 56 chr20 32813485 32813665 -39340217 - MER5A DNA MER1_type 0 189 13 577 302 68 8 chr20 32813689 32813924 -39339958 - MIR SINE MIR -12 250 2 662 128 0 0 chr20 32814374 32814468 -39339414 - AluSg/x SINE Alu -10 302 209 308 254 88 26 chr20 32814659 32814773 -39339109 + L2 LINE L2 2888 3008 -305 * 698 187 173 0 chr20 32814764 32814914 -39338968 + L2 LINE L2 3136 3311 -2 214 270 0 67 chr20 32814923 32815012 -39338870 - L3 LINE CR1 -21 1556 1474 289 287 21 0 chr20 32815274 32815368 -39338514 + MIR SINE MIR 35 130 -132 231 270 122 36 chr20 32817457 32817644 -39336238 + L2 LINE L2 2772 2968 -304 577 315 166 17 chr20 32817682 32818104 -39335778 - L2 LINE L2 0 3313 2829 483 281 20 7 chr20 32818325 32818471 -39335411 - MIR SINE MIR -58 204 57 472 280 68 5 chr20 32819163 32819375 -39334507 - MIR SINE MIR 0 262 29 288 353 17 0 chr20 32819426 32819542 -39334340 - MIR SINE MIR -98 164 47 217 294 92 18 chr20 32819799 32819908 -39333974 + MIR3 SINE MIR 84 200 -8 522 256 108 34 chr20 32820777 32820953 -39332929 - MIR3 SINE MIR -7 201 13 442 269 0 25 chr20 32821067 32821186 -39332696 - MIR SINE MIR -82 180 65 245 186 71 29 chr20 32821381 32821451 -39332431 - MIR SINE MIR -71 137 65 642 332 74 0 chr20 32821519 32821736 -39332146 + MIR SINE MIR 16 248 -14 468 301 76 36 chr20 32822102 32822351 -39331531 + L1MC4a LINE L1 5607 5865 -1943 2627 48 0 3 chr20 32822351 32822663 -39331219 - AluY SINE Alu 0 311 1 244 349 67 62 chr20 32822854 32823049 -39330833 - L2 LINE L2 -6 3266 3071 2544 80 0 0 chr20 32823186 32823498 -39330384 - AluSx SINE Alu 0 312 1 215 248 129 10 chr20 32823879 32823980 -39329902 - MIR3 SINE MIR -15 193 81 36 53 0 0 chr20 32824975 32825032 -39328850 + GC_rich Low_complexity Low_complexity 1 57 0 192 77 0 0 chr20 32825255 32825281 -39328601 + (CCG)n Simple_repeat Simple_repeat 3 28 0 337 270 0 11 chr20 32825739 32825828 -39328054 + (TCCA)n Simple_repeat Simple_repeat 4 91 0 233 288 15 0 chr20 32826005 32826071 -39327811 + MIR SINE MIR 36 102 -106 363 279 95 48 chr20 32826425 32826526 -39327356 - L2 LINE L2 -6 3307 3212 1223 150 119 17 chr20 32826526 32826820 -39327062 - MER33 DNA MER1_type 0 324 1 363 279 95 48 chr20 32826820 32826969 -39326913 - L2 LINE L2 -101 3212 2990 820 167 0 0 chr20 32826985 32827111 -39326771 + AluJb SINE Alu 1 126 -186 1631 123 39 99 chr20 32827113 32827445 -39326437 + AluJo SINE Alu 1 312 0 616 341 153 31 chr20 32827449 32827927 -39325955 - L2 LINE L2 -339 2975 2440 1895 133 39 36 chr20 32828086 32828394 -39325488 + AluJb SINE Alu 2 310 -2 1245 54 0 32 chr20 32828404 32828590 -39325292 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 266 308 0 69 chr20 32828942 32828997 -39324885 + L2 LINE L2 2701 2758 -556 2194 157 53 65 chr20 32828997 32829128 -39324754 + MLT1D LTR MaLR 1 132 -373 2325 103 7 0 chr20 32829128 32829428 -39324454 - AluSx SINE Alu -10 302 1 2194 157 53 65 chr20 32829428 32829807 -39324075 + MLT1D LTR MaLR 132 505 0 266 308 0 69 chr20 32829807 32829881 -39324001 + L2 LINE L2 2758 2821 -493 455 274 41 14 chr20 32829887 32830033 -39323849 + MIR SINE MIR 86 235 -27 183 184 0 0 chr20 32830034 32830072 -39323810 + (TTA)n Simple_repeat Simple_repeat 3 40 0 263 81 0 0 chr20 32830606 32830643 -39323239 - tRNA-Asp-GAC tRNA tRNA -38 37 1 360 283 46 64 chr20 32830742 32830883 -39322999 - L1MC4a LINE L1 -1884 5924 5789 2302 104 7 3 chr20 32830883 32831181 -39322701 + AluSq SINE Alu 1 299 -14 360 283 46 64 chr20 32831181 32831322 -39322560 - L1MC4a LINE L1 -2019 5789 5647 378 252 173 0 chr20 32831394 32831521 -39322361 - L1MC4a LINE L1 -523 5641 5493 480 246 65 85 chr20 32831686 32831908 -39321974 - L1MC4a LINE L1 -753 5393 5179 1970 82 16 0 chr20 32831908 32832151 -39321731 - AluSc SINE Alu -62 247 1 480 246 65 85 chr20 32832151 32832269 -39321613 - L1MC4a LINE L1 -967 5179 5060 370 206 108 0 chr20 32832565 32832667 -39321215 - L1MC4a LINE L1 -1578 4568 4456 372 306 27 0 chr20 32832667 32832778 -39321104 + L2 LINE L2 3187 3300 -13 373 281 146 42 chr20 32832786 32832978 -39320904 - L1MC4a LINE L1 -1700 4446 4235 243 167 0 21 chr20 32833011 32833059 -39320823 - MLT1L LTR MaLR -568 47 1 256 335 62 78 chr20 32833121 32833491 -39320391 + LTR67 LTR ERVL 186 549 -8 626 228 28 0 chr20 32833589 32833734 -39320148 - L1ME2 LINE L1 -25 6139 5991 2343 100 0 0 chr20 32833759 32834058 -39319824 + AluSg SINE Alu 1 299 -11 236 211 155 0 chr20 32834058 32834129 -39319753 + L1MC/D LINE L1 5432 5513 -729 264 59 0 0 chr20 32834977 32835011 -39318871 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 273 274 88 9 chr20 32835015 32835128 -39318754 - L2 LINE L2 0 3272 3151 199 279 16 16 chr20 32835122 32835183 -39318699 - MIR3 SINE MIR -52 156 96 * 2476 55 14 0 chr20 32835215 32835505 -39318377 - AluSc SINE Alu -15 294 1 1509 181 22 50 chr20 32835562 32835882 -39318000 - AluJo SINE Alu -1 311 1 187 363 186 0 chr20 32835981 32836105 -39317777 + L2 LINE L2 3117 3263 -9 * 334 287 85 24 chr20 32836092 32836256 -39317626 + L2 LINE L2 2412 2585 -729 901 132 0 0 chr20 32836321 32836450 -39317432 - AluJb SINE Alu -9 303 175 485 270 106 95 chr20 32837449 32837912 -39315970 + L1MEd LINE L1 2 469 -5650 2204 133 7 0 chr20 32837912 32838213 -39315669 - AluSg SINE Alu -6 304 2 3142 225 59 21 chr20 32838463 32838854 -39315028 + L1M4 LINE L1 3943 4318 -1828 1424 177 156 91 chr20 32838854 32838937 -39314945 - MLT1D LTR MaLR 0 505 429 2318 94 0 3 chr20 32838937 32839245 -39314637 - AluSx SINE Alu 0 307 1 1424 177 156 91 chr20 32839245 32839634 -39314248 - MLT1D LTR MaLR -76 429 1 3142 225 59 21 chr20 32839634 32840208 -39313674 + L1M4 LINE L1 4318 4945 -1201 1630 239 90 62 chr20 32840406 32840983 -39312899 + MLT1E LTR MaLR 1 593 0 2135 114 4 0 chr20 32841256 32841557 -39312325 + AluSx SINE Alu 1 302 0 201 231 0 0 chr20 32841999 32842038 -39311844 + CT-rich Low_complexity Low_complexity 4 42 0 1016 245 24 23 chr20 32842078 32842338 -39311544 - MIR SINE MIR 0 262 5 489 34 0 0 chr20 32842565 32842624 -39311258 + (TTCTC)n Simple_repeat Simple_repeat 4 62 0 2193 101 4 0 chr20 32842626 32842902 -39310980 - AluSp SINE Alu -36 277 1 291 136 0 0 chr20 32843141 32843185 -39310697 - MSTB LTR MaLR 0 426 383 1388 86 0 0 chr20 32843185 32843359 -39310523 - AluSq SINE Alu -8 305 132 2497 119 43 0 chr20 32843359 32843730 -39310152 - MSTB LTR MaLR -39 387 1 252 0 0 0 chr20 32843757 32843785 -39310097 + (CA)n Simple_repeat Simple_repeat 1 28 0 474 275 80 56 chr20 32843845 32843986 -39309896 - MLT1J LTR MaLR -18 493 357 1753 134 17 60 chr20 32843986 32844146 -39309736 - AluJb SINE Alu -14 298 155 2263 96 17 0 chr20 32844146 32844438 -39309444 - AluSg SINE Alu -13 297 1 1753 134 17 60 chr20 32844438 32844575 -39309307 - AluJb SINE Alu -157 155 14 474 275 80 56 chr20 32844575 32844691 -39309191 - MLT1J LTR MaLR -154 357 245 1033 88 17 4 chr20 32844691 32844930 -39308952 + (TTTC)n Simple_repeat Simple_repeat 1 242 0 474 275 80 56 chr20 32844930 32845043 -39308839 - MLT1J LTR MaLR -266 245 111 244 273 97 40 chr20 32845049 32845225 -39308657 - L1ME3A LINE L1 -242 5928 5743 1347 281 38 15 chr20 32845229 32845703 -39308179 - LTR16C LTR ERVL -6 485 1 324 310 142 22 chr20 32845735 32845967 -39307915 - L1ME3A LINE L1 -467 5703 5444 341 269 36 18 chr20 32845974 32846141 -39307741 - L1ME LINE L1 -571 5595 5426 986 142 0 0 chr20 32846217 32846358 -39307524 - FLAM_C SINE Alu -2 141 1 1486 185 33 49 chr20 32846388 32846518 -39307364 - Charlie1 DNA MER1_type 0 2761 2630 2247 109 0 0 chr20 32846518 32846821 -39307061 - AluSx SINE Alu 0 303 1 1486 185 33 49 chr20 32846821 32846897 -39306985 - Charlie1 DNA MER1_type -131 2630 2554 2114 113 34 0 chr20 32846897 32847188 -39306694 - AluSx SINE Alu -11 301 1 1486 185 33 49 chr20 32847188 32847405 -39306477 - Charlie1 DNA MER1_type -207 2554 2343 2393 259 60 57 chr20 32847472 32848001 -39305881 - L1MEc LINE L1 -4331 2390 1864 2365 117 0 0 chr20 32848001 32848309 -39305573 - AluSx SINE Alu -4 308 1 2393 259 60 57 chr20 32848309 32848814 -39305068 - L1MEc LINE L1 -4857 1864 1349 2055 141 21 0 chr20 32848814 32849105 -39304777 - AluJb SINE Alu -4 308 12 2393 259 60 57 chr20 32849105 32849345 -39304537 - L1MEc LINE L1 -5372 1349 1111 350 227 0 10 chr20 32849379 32849476 -39304406 + (CATA)n Simple_repeat Simple_repeat 3 98 0 352 119 0 0 chr20 32849677 32849736 -39304146 - FLAM SINE Alu -1 132 74 1553 238 6 58 chr20 32849749 32850245 -39303637 - MER65B LTR ERV1 -8 523 54 1256 126 0 0 chr20 32850246 32850421 -39303461 - AluSx SINE Alu -3 307 133 457 139 51 0 chr20 32850421 32850500 -39303382 + MLT1D LTR MaLR 309 391 -114 2116 110 0 0 chr20 32850523 32850858 -39303024 - AluSx SINE Alu 0 335 1 1029 98 0 0 chr20 32850863 32850996 -39302886 - AluSx SINE Alu -179 133 1 356 125 31 16 chr20 32850996 32851060 -39302822 - MER65B LTR ERV1 -466 65 1 3115 234 42 15 chr20 32851060 32851239 -39302643 - L1M4 LINE L1 -2101 4045 3872 2214 126 7 0 chr20 32851239 32851548 -39302334 - AluSx SINE Alu -1 311 1 3115 234 42 15 chr20 32851548 32852245 -39301637 - L1M4 LINE L1 -2274 3872 3145 2891 194 62 2 chr20 32852242 32852875 -39301007 - L1MEc LINE L1 -5842 698 28 * 269 222 111 10 chr20 32852899 32852998 -39300884 + MIR SINE MIR 154 262 0 412 197 247 28 chr20 32853402 32853580 -39300302 - MIR SINE MIR -11 251 35 1062 241 65 70 chr20 32853790 32854066 -39299816 - MLT1J LTR MaLR -2 509 233 2144 149 0 13 chr20 32854066 32854382 -39299500 + AluJo SINE Alu 1 312 0 1062 241 65 70 chr20 32854382 32854486 -39299396 - MLT1J LTR MaLR -278 233 130 2441 68 14 0 chr20 32854486 32854778 -39299104 - AluY SINE Alu -15 296 1 1062 241 65 70 chr20 32854778 32854885 -39298997 - MLT1J LTR MaLR -381 130 23 644 280 42 5 chr20 32854942 32855135 -39298747 - MIR SINE MIR -34 228 29 856 166 7 0 chr20 32855972 32856117 -39297765 + U1 snRNA snRNA 1 146 -19 498 325 104 35 chr20 32856246 32856731 -39297151 + L2 LINE L2 2764 3272 0 1241 132 62 126 chr20 32856775 32857100 -39296782 - L1MB7 LINE L1 -62 6122 5819 1015 92 0 0 chr20 32857100 32857241 -39296641 - AluY SINE Alu -13 298 158 2450 186 65 12 chr20 32857241 32857569 -39296313 - L1MB7 LINE L1 -362 5822 5513 1668 190 0 21 chr20 32857569 32857884 -39295998 - AluJb SINE Alu 0 313 5 2450 186 65 12 chr20 32857884 32858394 -39295488 - L1MB7 LINE L1 -671 5513 4942 3054 189 53 33 chr20 32858414 32859066 -39294816 - L1MC4a LINE L1 0 7808 7136 2211 139 0 0 chr20 32859066 32859376 -39294506 - AluJb SINE Alu -2 310 1 3054 189 53 33 chr20 32859376 32859516 -39294366 - L1MC4a LINE L1 -672 7136 7000 191 224 194 0 chr20 32859572 32859639 -39294243 - MIR SINE MIR -66 142 63 2191 117 0 13 chr20 32859794 32860093 -39293789 - AluSx SINE Alu -17 295 1 2523 90 3 0 chr20 32860470 32860782 -39293100 + AluSp SINE Alu 1 313 0 650 253 97 2 chr20 32860832 32861093 -39292789 - MLT1G LTR MaLR 0 590 325 1970 164 3 3 chr20 32861369 32861668 -39292214 - AluSx SINE Alu -13 299 1 301 329 76 19 chr20 32861668 32861818 -39292064 + L1MC4a LINE L1 5737 5898 -1910 993 210 54 9 chr20 32861844 32862068 -39291814 + MIR SINE MIR 21 254 -8 2358 90 7 0 chr20 32862158 32862459 -39291423 + AluSq SINE Alu 1 303 -10 325 231 67 0 chr20 32862971 32863075 -39290807 - Charlie8 DNA MER1_type -2143 274 164 520 204 25 111 chr20 32863817 32863844 -39290038 + MIR SINE MIR 3 31 -231 2377 89 0 29 chr20 32863844 32864160 -39289722 - AluSg SINE Alu -3 307 1 520 204 25 111 chr20 32864160 32864294 -39289588 + MIR SINE MIR 31 150 -112 270 286 48 0 chr20 32864773 32864857 -39289025 + L2 LINE L2 3226 3313 0 274 289 89 0 chr20 32864907 32864997 -39288885 - MIR SINE MIR -48 214 117 466 242 121 8 chr20 32865003 32865135 -39288747 - L2 LINE L2 0 3313 3167 788 245 134 9 chr20 32865237 32865453 -39288429 + MIR SINE MIR 19 261 -1 370 301 70 32 chr20 32865470 32865610 -39288272 - L2 LINE L2 -249 3023 2875 2351 113 0 3 chr20 32865610 32865920 -39287962 + AluSx SINE Alu 1 309 -3 370 301 70 32 chr20 32865920 32865935 -39287947 - L2 LINE L2 -397 2875 2862 450 36 0 0 chr20 32866538 32866594 -39287288 + (TG)n Simple_repeat Simple_repeat 2 57 0 550 273 6 48 chr20 32866666 32866831 -39287051 + MIR SINE MIR 46 203 -59 467 176 59 0 chr20 32867014 32867116 -39286766 - MER5A DNA MER1_type -77 112 5 845 141 81 60 chr20 32867128 32867259 -39286623 - MER5A DNA MER1_type 0 189 62 1818 151 101 50 chr20 32867259 32867297 -39286585 - MLT2C1 LTR ERVL 0 397 362 585 64 0 0 chr20 32867297 32867375 -39286507 + (TG)n Simple_repeat Simple_repeat 2 79 0 1818 151 101 50 chr20 32867375 32867595 -39286287 - MLT2C1 LTR ERVL -35 362 112 1897 148 7 7 chr20 32867595 32867885 -39285997 + AluJo SINE Alu 1 290 -22 1818 151 101 50 chr20 32867885 32868003 -39285879 - MLT2C1 LTR ERVL -285 112 1 845 141 81 60 chr20 32868003 32868056 -39285826 - MER5A DNA MER1_type -127 62 1 241 258 0 0 chr20 32868928 32868994 -39284888 - MLT1L LTR MaLR -6 609 544 * 521 217 6 75 chr20 32868991 32869072 -39284810 - Charlie4a DNA MER1_type -1453 508 442 459 235 10 0 chr20 32869072 32869174 -39284708 - L1MA10 LINE L1 0 6334 6232 521 217 6 75 chr20 32869174 32869253 -39284629 - Charlie4a DNA MER1_type -1519 442 359 756 262 138 12 chr20 32869254 32869666 -39284216 - LTR16B LTR ERVL 0 464 1 1019 218 45 0 chr20 32869672 32869915 -39283967 - Charlie4a DNA MER1_type -152 356 103 2352 98 0 3 chr20 32869918 32870224 -39283658 + AluY SINE Alu 1 305 -6 586 306 35 35 chr20 32870355 32870554 -39283328 + MIR SINE MIR 58 256 -6 1437 257 159 16 chr20 32870595 32871112 -39282770 - MLT1G1 LTR MaLR 0 595 5 896 251 61 78 chr20 32871237 32871648 -39282234 - MLT1L LTR MaLR -44 571 168 2064 230 115 35 chr20 32871799 32872463 -39281419 - L1ME3A LINE L1 -9 6161 5552 4320 84 28 16 chr20 32872463 32873036 -39280846 - LTR19B LTR ERV1 0 580 1 2064 230 115 35 chr20 32873036 32873083 -39280799 - L1ME3A LINE L1 -618 5552 5510 1503 203 9 44 chr20 32873083 32873398 -39280484 - AluJb SINE Alu -4 308 5 2064 230 115 35 chr20 32873398 32873459 -39280423 - L1ME3A LINE L1 -660 5510 5326 343 248 319 0 chr20 32873569 32873682 -39280200 - MER91A DNA MER1_type -47 149 1 360 284 31 132 chr20 32873726 32874181 -39279701 + L3 LINE CR1 1168 1576 -1 687 208 188 43 chr20 32874779 32874941 -39278941 + MIR SINE MIR 22 222 -40 288 120 0 0 chr20 32874941 32874991 -39278891 + (CA)n Simple_repeat Simple_repeat 2 51 0 687 208 188 43 chr20 32874991 32875035 -39278847 + MIR SINE MIR 222 258 -4 321 260 0 0 chr20 32875166 32875239 -39278643 + MIR SINE MIR 51 123 -139 759 239 19 10 chr20 32875758 32875900 -39277982 + MER3 DNA MER1_type 1 140 -69 6729 38 8 1 chr20 32875900 32876700 -39277182 + L1PA5 LINE L1 5346 6150 -4 2244 109 14 0 chr20 32876705 32876998 -39276884 + AluSx SINE Alu 1 297 -15 1998 140 28 11 chr20 32876998 32877354 -39276528 - L1MB3 LINE L1 -9 6174 5813 759 239 19 10 chr20 32877354 32877409 -39276473 + MER3 DNA MER1_type 142 207 -2 1002 272 12 19 chr20 32877410 32877667 -39276215 + MIR SINE MIR 8 262 0 518 276 214 24 chr20 32878019 32878356 -39275526 - L2 LINE L2 0 3313 2913 588 273 253 17 chr20 32878470 32879133 -39274749 + L2 LINE L2 2084 2903 -411 1951 142 27 0 chr20 32879300 32879595 -39274287 - AluJo SINE Alu -9 303 1 335 234 202 0 chr20 32879615 32879709 -39274173 + L2 LINE L2 3201 3313 0 1097 221 49 0 chr20 32880021 32880247 -39273635 - MIR SINE MIR -11 251 15 262 299 26 0 chr20 32880297 32880374 -39273508 - L2 LINE L2 -37 3235 3157 196 348 0 14 chr20 32880483 32880552 -39273330 - L2 LINE L2 -342 2972 2905 254 322 148 0 chr20 32880750 32880865 -39273017 - L2 LINE L2 0 3272 3141 1230 232 105 47 chr20 32881069 32881534 -39272348 + L1MC4a LINE L1 5439 5930 -1878 1718 161 16 46 chr20 32881542 32881847 -39272035 + AluJo SINE Alu 1 296 -16 2240 133 3 0 chr20 32881918 32882227 -39271655 + AluSx SINE Alu 1 310 -2 360 200 0 0 chr20 32882786 32882856 -39271026 + MIR SINE MIR 186 255 -7 466 290 54 78 chr20 32883244 32883574 -39270308 + L1MC4a LINE L1 5643 5982 -139 1487 156 14 83 chr20 32883626 32883914 -39269968 - AluJo SINE Alu -44 268 1 310 281 137 29 chr20 32884069 32884514 -39269368 - L1ME4a LINE L1 -11 6110 5618 2312 116 3 0 chr20 32884567 32884870 -39269012 + AluSx SINE Alu 3 306 -6 293 212 24 11 chr20 32884966 32885056 -39268826 + L1MC4 LINE L1 7904 8042 0 2081 120 3 0 chr20 32885791 32886075 -39267807 - AluJo SINE Alu -5 307 23 1414 161 5 0 chr20 32886075 32886293 -39267589 - AluJb SINE Alu -93 219 1 1603 173 114 1 chr20 32886293 32886775 -39267107 - L1ME4a LINE L1 -684 5500 4979 914 142 0 0 chr20 32886775 32886902 -39266980 + AluJb SINE Alu 1 127 -185 2284 115 0 0 chr20 32886908 32887204 -39266678 + AluSx SINE Alu 1 296 -16 2048 120 31 0 chr20 32887436 32887728 -39266154 + AluSq SINE Alu 3 303 -10 289 211 0 0 chr20 32887803 32887855 -39266027 + MIR SINE MIR 99 150 -112 360 331 114 6 chr20 32887955 32888121 -39265761 - L3 LINE CR1 -13 1564 1381 470 298 31 25 chr20 32888232 32888393 -39265489 - MIR SINE MIR -73 189 28 829 168 13 0 chr20 32888697 32888846 -39265036 - Zaphod DNA AcHobo 0 4031 3881 458 282 93 1 chr20 32888916 32889218 -39264664 - MER115 DNA AcHobo -153 540 171 285 228 13 13 chr20 32889250 32889329 -39264553 - MER115 DNA AcHobo -614 79 1 750 211 34 72 chr20 32889649 32889857 -39264025 + MIR SINE MIR 30 229 -33 198 338 38 0 chr20 32890100 32890180 -39263702 - MIR SINE MIR -78 130 48 284 231 13 13 chr20 32890559 32890637 -39263245 + MER115 DNA AcHobo 1 78 -615 304 245 64 11 chr20 32890692 32890786 -39263096 + MIR SINE MIR 99 197 -65 322 155 42 28 chr20 32890821 32890892 -39262990 + MIR3 SINE MIR 88 159 -49 256 299 30 45 chr20 32890894 32891028 -39262854 + Charlie8 DNA MER1_type 2 133 -2284 800 167 0 22 chr20 32891066 32891204 -39262678 + FRAM SINE Alu 25 159 -17 568 234 13 7 chr20 32891208 32891362 -39262520 + Charlie8 DNA MER1_type 126 280 -2137 2413 82 0 7 chr20 32891542 32891836 -39262046 + AluSq SINE Alu 11 302 -11 839 137 0 43 chr20 32891844 32891983 -39261899 + FLAM_C SINE Alu 1 133 0 235 290 19 37 chr20 32892302 32892409 -39261473 - MIR3 SINE MIR -14 194 90 469 269 128 6 chr20 32892479 32892635 -39261247 + MIR SINE MIR 72 246 -16 246 229 94 31 chr20 32892676 32892772 -39261110 - MLT1K LTR MaLR -92 496 395 505 112 0 41 chr20 32892772 32892870 -39261012 + (TCTCCC)n Simple_repeat Simple_repeat 4 97 0 826 251 94 30 chr20 32892877 32893144 -39260738 - MLT1K LTR MaLR -303 285 2 598 277 34 0 chr20 32893161 32893309 -39260573 - L2 LINE L2 -4 3268 3116 2287 116 3 0 chr20 32893314 32893625 -39260257 + AluSx SINE Alu 1 312 0 377 167 141 0 chr20 32894069 32894147 -39259735 + MIR SINE MIR 38 126 -136 349 240 226 18 chr20 32894175 32894396 -39259486 - L1ME4a LINE L1 -3 6118 5852 409 273 148 27 chr20 32894445 32894628 -39259254 - MIR SINE MIR -56 206 2 700 252 77 29 chr20 32894641 32894915 -39258967 - L1ME4a LINE L1 -289 5832 5546 260 215 159 0 chr20 32894975 32895082 -39258800 - L1ME4a LINE L1 -687 5434 5311 475 202 246 0 chr20 32895137 32895251 -39258631 - MER5A DNA MER1_type -8 181 40 704 248 143 80 chr20 32895252 32895655 -39258227 - MLT1H LTR MaLR -2 547 98 2518 42 13 7 chr20 32895655 32895963 -39257919 + AluY SINE Alu 2 311 0 704 248 143 80 chr20 32895963 32896066 -39257816 - MLT1H LTR MaLR -451 98 3 672 145 184 13 chr20 32896120 32896272 -39257610 - MER5B DNA MER1_type 0 178 1 1351 122 13 84 chr20 32896272 32896510 -39257372 - AluJo SINE Alu -7 305 85 235 188 21 0 chr20 32896910 32896958 -39256924 - L2 LINE L2 0 3272 3224 220 241 69 0 chr20 32897159 32897217 -39256665 - MIR SINE MIR -6 256 195 233 263 18 0 chr20 32897244 32897301 -39256581 + MIR SINE MIR 2 59 -203 347 299 50 70 chr20 32897412 32897588 -39256294 - MIR SINE MIR -68 140 12 316 277 219 8 chr20 32899220 32899339 -39254543 - L1MC4a LINE L1 -1881 5927 5784 366 294 62 12 chr20 32899350 32899510 -39254372 + Charlie8 DNA MER1_type 58 225 -2192 202 143 0 0 chr20 32899677 32899712 -39254170 - L2 LINE L2 0 3313 3279 2055 121 17 17 chr20 32902326 32902624 -39251258 + AluSx SINE Alu 1 298 -14 417 161 11 23 chr20 32902912 32902999 -39250883 + MLT1J LTR MaLR 95 180 -331 262 282 48 32 chr20 32903150 32903274 -39250608 + MLT1J LTR MaLR 384 509 -2 191 293 151 38 chr20 32903277 32903383 -39250499 - MIR SINE MIR -38 224 107 1261 254 91 59 chr20 32903619 32904008 -39249874 - L2 LINE L2 -4 3309 2886 2173 117 0 0 chr20 32904008 32904318 -39249564 + AluSx SINE Alu 1 310 0 1261 254 91 59 chr20 32904318 32904480 -39249402 - L2 LINE L2 -427 2886 2731 186 250 0 0 chr20 32905365 32905401 -39248481 - MER5A DNA MER1_type -8 181 146 493 254 214 32 chr20 32905581 32905801 -39248081 + MIR SINE MIR 3 262 0 678 272 186 3 chr20 32905847 32906159 -39247723 + L2 LINE L2 2388 2756 -558 650 223 64 13 chr20 32906937 32907094 -39246788 - L2 LINE L2 -17 3296 3132 1846 146 0 30 chr20 32907261 32907562 -39246320 + AluJb SINE Alu 1 292 -20 191 372 0 0 chr20 32907777 32907855 -39246027 - MIR3 SINE MIR -21 187 110 293 220 129 8 chr20 32907870 32908002 -39245880 - L2 LINE L2 -304 3009 2862 239 287 98 25 chr20 32908135 32908257 -39245625 - MIR SINE MIR -55 207 77 786 172 41 237 chr20 32908842 32909021 -39244861 - L2 LINE L2 -3 3310 3276 1901 163 3 28 chr20 32909021 32909340 -39244542 + AluJo SINE Alu 1 311 -1 786 172 41 237 chr20 32909340 32909624 -39244258 - L2 LINE L2 -37 3276 2938 346 283 20 0 chr20 32909910 32910009 -39243873 - L2 LINE L2 -673 2641 2541 242 305 121 59 chr20 32910007 32910263 -39243619 + L2 LINE L2 2926 3197 -75 * 1369 242 22 62 chr20 32910291 32910420 -39243462 + L2 LINE L2 2881 3014 -299 2207 132 0 10 chr20 32910420 32910724 -39243158 - AluSx SINE Alu -11 301 1 1369 242 22 62 chr20 32910724 32911045 -39242837 + L2 LINE L2 3014 3313 0 290 260 99 50 chr20 32911086 32911267 -39242615 - L2 LINE L2 -473 2841 2652 273 278 63 13 chr20 32911628 32911778 -39242104 - MIR SINE MIR -70 192 35 1547 163 103 0 chr20 32912254 32912506 -39241376 + AluJb SINE Alu 7 284 -28 509 56 44 0 chr20 32912506 32912596 -39241286 + (TA)n Simple_repeat Simple_repeat 2 95 0 2219 113 10 0 chr20 32912901 32913202 -39240680 + AluSx SINE Alu 1 304 -8 274 197 120 86 chr20 32913220 32913337 -39240545 + L1ME LINE L1 5578 5698 -472 1690 140 0 0 chr20 32913337 32913572 -39240310 - AluSx SINE Alu -77 235 1 2145 137 3 13 chr20 32913879 32914194 -39239688 - AluJo SINE Alu 0 312 1 280 176 54 40 chr20 32914333 32914407 -39239475 - L1MC/D LINE L1 -2035 5773 5699 222 277 0 0 chr20 32914880 32914927 -39238955 + polypyrimidine Low_complexity Low_complexity 3 49 0 452 285 61 131 chr20 32915087 32915515 -39238367 - L2 LINE L2 -34 3238 2841 419 208 177 0 chr20 32915568 32915664 -39238218 - L2 LINE L2 0 3313 3201 672 190 58 75 chr20 32915679 32915853 -39238029 - MIR SINE MIR 0 262 92 891 295 107 24 chr20 32915902 32916285 -39237597 + L1MC4a LINE L1 5515 5929 -1879 221 128 21 0 chr20 32916315 32916362 -39237520 + GA-rich Low_complexity Low_complexity 1 48 0 480 266 84 13 chr20 32916595 32916749 -39237133 - MIR3 SINE MIR -39 169 5 * 1025 268 160 14 chr20 32916745 32917389 -39236493 - L2 LINE L2 -23 3290 2558 271 329 0 0 chr20 32917383 32917468 -39236414 + MIR3 SINE MIR 121 205 -3 * 752 284 44 0 chr20 32917895 32918120 -39235762 + Charlie8 DNA MER1_type 3 237 -2180 558 268 216 9 chr20 32918124 32918550 -39235332 - L1MC4a LINE L1 -1639 6169 5656 1614 157 47 8 chr20 32918689 32918944 -39234938 + AluJo SINE Alu 1 265 -47 345 159 0 102 chr20 32919036 32919124 -39234758 + MIR3 SINE MIR 110 188 -20 184 319 43 11 chr20 32919287 32919381 -39234501 - L3 LINE CR1 -12 1565 1469 370 253 235 12 chr20 32919449 32919611 -39234271 + MIR SINE MIR 50 247 -15 1757 195 20 0 chr20 32919681 32919979 -39233903 - AluJb SINE Alu -8 304 1 231 114 0 0 chr20 32919998 32920033 -39233849 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 314 283 131 56 chr20 32920040 32920238 -39233644 - L2 LINE L2 -17 3296 3084 387 235 76 25 chr20 32920336 32920455 -39233427 - MIR SINE MIR -65 197 73 2449 91 0 0 chr20 32920477 32920785 -39233097 - AluSg SINE Alu -2 308 1 230 286 0 29 chr20 32921449 32921519 -39232363 + C-rich Low_complexity Low_complexity 1 68 0 621 268 81 0 chr20 32921536 32921745 -39232137 + MIR SINE MIR 30 255 -7 381 336 120 6 chr20 32921827 32922160 -39231722 + L2 LINE L2 2593 2963 -351 23 0 0 0 chr20 32922733 32922756 -39231126 + GC_rich Low_complexity Low_complexity 1 23 0 227 103 26 0 chr20 32922777 32922816 -39231066 + GA-rich Low_complexity Low_complexity 1 40 0 54 40 0 0 chr20 32922972 32923047 -39230835 + GC_rich Low_complexity Low_complexity 1 75 0 339 269 0 13 chr20 32924349 32924427 -39229455 + MIR SINE MIR 73 149 -59 184 305 95 11 chr20 32924663 32924758 -39229124 + MIR SINE MIR 34 136 -126 639 294 35 28 chr20 32925508 32925763 -39228119 - MIR SINE MIR -4 258 2 408 312 51 13 chr20 32925951 32926108 -39227774 + MIR3 SINE MIR 39 201 -7 409 269 171 52 chr20 32926480 32926766 -39227116 - Charlie8 DNA MER1_type -1010 1407 1 207 344 41 25 chr20 32926874 32926996 -39226886 - MIR SINE MIR -17 245 122 531 285 91 22 chr20 32927636 32927884 -39225998 + MIR SINE MIR 2 262 0 1291 251 26 59 chr20 32928013 32928631 -39225251 - L2 LINE L2 -2 3311 2668 2237 97 0 3 chr20 32928631 32928940 -39224942 + AluSc SINE Alu 1 308 -1 1291 251 26 59 chr20 32928940 32929046 -39224836 - L2 LINE L2 -645 2668 2560 626 273 101 18 chr20 32929119 32929346 -39224536 + MIR SINE MIR 12 257 -5 234 315 34 0 chr20 32930177 32930266 -39223616 + L2 LINE L2 2996 3087 -226 833 249 35 10 chr20 32930679 32930880 -39223002 + MIR SINE MIR 57 262 0 477 294 98 0 chr20 32930873 32931016 -39222866 - MIR SINE MIR -105 157 1 * 2368 78 0 0 chr20 32931097 32931403 -39222479 - AluSx SINE Alu -6 306 1 184 237 0 0 chr20 32931927 32931965 -39221917 + MIR SINE MIR 218 255 -7 244 241 37 0 chr20 32931994 32932048 -39221834 + MIR SINE MIR 89 144 -64 538 246 96 18 chr20 32932138 32932305 -39221577 + MIR SINE MIR 72 251 -11 536 293 135 19 chr20 32932423 32932689 -39221193 + L3 LINE CR1 1281 1577 0 1931 138 7 13 chr20 32932817 32933122 -39220760 - AluJb SINE Alu -3 309 7 370 188 89 20 chr20 32933160 32933261 -39220621 - L1MC5 LINE L1 -47 7914 7807 763 186 77 66 chr20 32933264 32933447 -39220435 + MER3 DNA MER1_type 1 185 -24 329 196 168 63 chr20 32933483 32933572 -39220310 - L1MC5 LINE L1 -157 7804 7726 2378 81 0 0 chr20 32933572 32933868 -39220014 + AluSx SINE Alu 2 297 -15 329 196 168 63 chr20 32933868 32933921 -39219961 - L1MC5 LINE L1 -235 7726 7647 889 234 0 0 chr20 32933921 32934105 -39219777 - FRAM SINE Alu 0 176 1 480 283 152 0 chr20 32934176 32934367 -39219515 + MER102b DNA MER1_type 119 338 -3 303 310 0 10 chr20 32934600 32934700 -39219182 - MIR SINE MIR -63 145 47 180 0 0 0 chr20 32934850 32934870 -39219012 + (A)n Simple_repeat Simple_repeat 1 20 0 235 338 0 0 chr20 32935217 32935288 -39218594 + MIR SINE MIR 35 105 -157 468 318 105 56 chr20 32935312 32935498 -39218384 + L2 LINE L2 2578 2754 -559 1920 148 0 10 chr20 32935498 32935801 -39218081 + AluJo SINE Alu 1 300 -12 1664 171 3 34 chr20 32935802 32936124 -39217758 + AluSx SINE Alu 1 312 0 2097 110 0 0 chr20 32936128 32936449 -39217433 + AluSx SINE Alu 1 321 0 468 318 105 56 chr20 32936449 32936957 -39216925 + L2 LINE L2 2756 3299 -14 2153 107 7 3 chr20 32936957 32937256 -39216626 + AluSx SINE Alu 1 300 -12 468 318 105 56 chr20 32937256 32937272 -39216610 + L2 LINE L2 3299 3313 0 262 250 70 30 chr20 32937283 32937383 -39216499 + MIR SINE MIR 103 206 -56 362 350 153 10 chr20 32937610 32937813 -39216069 - MIR SINE MIR -23 239 8 713 276 154 29 chr20 32937877 32938383 -39215499 - L2 LINE L2 0 3313 2872 2090 106 0 3 chr20 32938383 32938698 -39215184 + AluSx SINE Alu 1 314 0 1853 125 35 3 chr20 32938707 32938994 -39214888 + AluSx SINE Alu 1 296 -16 713 276 154 29 chr20 32938994 32939174 -39214708 - L2 LINE L2 -447 2866 2534 620 296 28 7 chr20 32939561 32939786 -39214096 + MIR SINE MIR 35 261 -1 208 363 0 0 chr20 32940340 32940486 -39213396 + (CAGA)n Simple_repeat Simple_repeat 4 149 0 270 0 0 0 chr20 32940500 32940530 -39213352 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 234 0 0 0 chr20 32940591 32940617 -39213265 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 254 95 40 40 chr20 32940678 32940752 -39213130 + (CAGA)n Simple_repeat Simple_repeat 4 77 0 198 0 0 0 chr20 32940854 32940876 -39213006 + (CAGA)n Simple_repeat Simple_repeat 4 25 0 337 241 17 40 chr20 32940986 32941215 -39212667 + (CAGA)n Simple_repeat Simple_repeat 1 223 0 353 282 11 11 chr20 32941230 32941404 -39212478 + (CAGA)n Simple_repeat Simple_repeat 4 177 0 213 132 0 0 chr20 32941502 32941540 -39212342 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 198 0 0 0 chr20 32941594 32941616 -39212266 + (CAGA)n Simple_repeat Simple_repeat 4 25 0 226 270 0 47 chr20 32941642 32941790 -39212092 + (CAGA)n Simple_repeat Simple_repeat 4 144 0 228 308 0 27 chr20 32941958 32942104 -39211778 + (CAGA)n Simple_repeat Simple_repeat 4 145 0 222 200 0 0 chr20 32943335 32943375 -39210507 + MIR SINE MIR 117 156 -106 1168 250 127 29 chr20 32943633 32944335 -39209547 - L2 LINE L2 0 3313 2540 1872 155 3 0 chr20 32944335 32944631 -39209251 - AluJo SINE Alu -15 297 1 1168 250 127 29 chr20 32944631 32944648 -39209234 - L2 LINE L2 -773 2540 2526 321 26 0 0 chr20 32944895 32944933 -39208949 + (TG)n Simple_repeat Simple_repeat 1 38 0 757 164 0 0 chr20 32944933 32945049 -39208833 - FLAM_C SINE Alu -17 116 1 339 222 12 0 chr20 32945079 32945160 -39208722 - MIR SINE MIR -77 131 50 218 241 19 0 chr20 32945233 32945287 -39208595 - MIR SINE MIR -115 147 93 308 344 119 19 chr20 32946221 32946554 -39207328 + L2 LINE L2 2658 3022 -250 2160 89 4 0 chr20 32946554 32946876 -39207006 + AluSp SINE Alu 1 323 0 211 273 0 0 chr20 32946973 32947028 -39206854 + L2 LINE L2 3218 3272 0 220 370 19 9 chr20 32947072 32947180 -39206702 + L3 LINE CR1 1328 1436 -141 301 319 22 0 chr20 32947479 32947570 -39206312 - MIR3 SINE MIR -7 201 109 381 43 0 0 chr20 32947807 32947854 -39206028 + (CA)n Simple_repeat Simple_repeat 1 47 0 351 298 84 0 chr20 32948119 32948250 -39205632 - MIR3 SINE MIR -46 162 21 523 329 80 78 chr20 32948331 32948781 -39205101 - L2 LINE L2 -1 3271 2821 637 250 14 0 chr20 32949003 32949147 -39204735 + MIR SINE MIR 2 147 -115 1617 163 42 17 chr20 32949149 32949438 -39204444 + AluJo SINE Alu 1 296 -16 318 259 82 15 chr20 32949565 32949700 -39204182 - MIR SINE MIR -26 236 93 334 289 35 9 chr20 32953864 32953978 -39199904 - MIR3 SINE MIR -7 201 85 355 246 45 20 chr20 32954376 32954520 -39199362 - MIR SINE MIR -14 248 101 263 253 33 22 chr20 32955186 32955277 -39198605 - MIR SINE MIR -59 149 58 455 211 53 53 chr20 32957581 32957714 -39196168 - MIR3 SINE MIR -36 172 40 180 0 0 0 chr20 32957979 32957999 -39195883 + (AGGGGG)n Simple_repeat Simple_repeat 5 24 0 265 310 89 51 chr20 32958278 32958436 -39195446 - MIR3 SINE MIR -9 199 36 468 194 37 9 chr20 32958440 32958548 -39195334 - L2 LINE L2 -11 3302 3192 324 217 116 65 chr20 32958604 32958742 -39195140 - MER5A DNA MER1_type 0 189 45 1829 163 3 10 chr20 32958811 32959124 -39194758 - AluJo SINE Alu -1 311 1 279 338 0 0 chr20 32959150 32959230 -39194652 + L2 LINE L2 2706 2785 -529 377 298 72 34 chr20 32959344 32959490 -39194392 + MLT1L LTR MaLR 7 165 -450 852 209 99 0 chr20 32959490 32959662 -39194220 + MER5A DNA MER1_type 1 189 0 377 298 72 34 chr20 32959662 32959723 -39194159 + MLT1L LTR MaLR 165 222 -393 978 240 208 5 chr20 32959723 32960102 -39193780 + MLT1J LTR MaLR 1 456 -55 2168 113 8 80 chr20 32960307 32960427 -39193455 - MLT1B LTR MaLR -6 384 257 4352 82 5 0 chr20 32960427 32960978 -39192904 - MER41A LTR ERV1 0 554 1 2168 113 8 80 chr20 32960978 32961092 -39192790 - MLT1B LTR MaLR -133 257 136 1979 124 7 0 chr20 32961092 32961382 -39192500 - AluSx SINE Alu -1 311 20 2168 113 8 80 chr20 32961382 32961546 -39192336 - MLT1B LTR MaLR -254 136 14 466 242 70 0 chr20 32961577 32961705 -39192177 + MLT1L LTR MaLR 462 598 -17 536 258 49 18 chr20 32961911 32962074 -39191808 - MER117 DNA MER1_type -23 174 7 424 313 0 9 chr20 32962173 32962285 -39191597 - MIR SINE MIR -70 192 82 275 303 98 0 chr20 32962475 32962597 -39191285 - MIR3 SINE MIR -51 157 24 545 0 0 0 chr20 32963094 32963156 -39190726 + 5S rRNA rRNA 29 90 -31 278 221 0 96 chr20 32963156 32963260 -39190622 - MIR SINE MIR -76 132 39 401 274 129 35 chr20 32963318 32963519 -39190363 + MIR SINE MIR 4 223 -39 2345 128 19 72 chr20 32963577 32964047 -39189835 + MER65A LTR ERV1 1 445 0 2232 110 0 0 chr20 32964099 32964407 -39189475 - AluSx SINE Alu -4 308 1 801 249 93 0 chr20 32964407 32964612 -39189270 - MIR SINE MIR -15 247 24 298 269 48 84 chr20 32964683 32964850 -39189032 - MIR SINE MIR -50 212 52 224 260 0 0 chr20 32965945 32965995 -39187887 - L2 LINE L2 -1 3312 3263 2001 96 41 0 chr20 32966041 32966339 -39187543 + AluSx SINE Alu 1 309 0 279 269 117 23 chr20 32966376 32966596 -39187286 - L2 LINE L2 -233 3039 2801 240 133 22 0 chr20 32966770 32966815 -39187067 + L2 LINE L2 2936 2981 -332 574 216 24 24 chr20 32966869 32966994 -39186888 - MER5A DNA MER1_type -4 185 61 1133 160 15 15 chr20 32966994 32967194 -39186688 + AluJo SINE Alu 1 200 -112 320 132 103 0 chr20 32967203 32967271 -39186611 - MER5A DNA MER1_type -114 75 1 525 214 6 89 chr20 32967281 32967449 -39186433 + MER5A DNA MER1_type 4 157 -32 296 250 135 0 chr20 32967437 32967533 -39186349 + L2 LINE L2 3164 3272 0 * 186 329 0 0 chr20 32967543 32967613 -39186269 + L2 LINE L2 3158 3227 -86 458 222 5 162 chr20 32967664 32967747 -39186135 - MER5B DNA MER1_type 0 178 138 1790 164 3 3 chr20 32967747 32968039 -39185843 + AluJo SINE Alu 13 304 -8 458 222 5 162 chr20 32968039 32968140 -39185742 - MER5B DNA MER1_type -40 138 23 1725 163 7 33 chr20 32968161 32968468 -39185414 - AluJb SINE Alu -13 299 1 907 178 46 0 chr20 32968524 32968698 -39185184 - MER5A DNA MER1_type -7 182 1 280 117 17 17 chr20 32968920 32968980 -39184902 + (TA)n Simple_repeat Simple_repeat 1 60 0 2095 105 0 20 chr20 32968980 32969284 -39184598 - AluSx SINE Alu -14 298 1 564 296 103 0 chr20 32969367 32969580 -39184302 + MIR SINE MIR 14 248 -14 197 206 185 43 chr20 32969906 32969998 -39183884 + MIR SINE MIR 42 146 -62 2539 128 82 5 chr20 32970064 32970477 -39183405 - MER65A LTR ERV1 0 445 1 2135 116 0 7 chr20 32970575 32970876 -39183006 - AluSx SINE Alu -12 300 2 687 140 27 176 chr20 32970939 32971083 -39182799 + MER53 DNA DNA 1 102 -87 1972 94 3 42 chr20 32971083 32971369 -39182513 + AluSg SINE Alu 1 275 -35 687 140 27 176 chr20 32971369 32971446 -39182436 + MER53 DNA DNA 102 189 0 294 136 0 102 chr20 32971560 32971584 -39182298 + AluSg/x SINE Alu 116 133 -167 2161 108 14 0 chr20 32971584 32971870 -39182012 + AluSx SINE Alu 1 290 -22 410 269 274 24 chr20 32972186 32972394 -39181488 + MIR SINE MIR 2 261 -1 507 71 35 0 chr20 32972888 32972973 -39180909 + (CGGGGG)n Simple_repeat Simple_repeat 4 91 0 28 48 0 0 chr20 32973819 32973861 -39180021 + GC_rich Low_complexity Low_complexity 1 42 0 221 57 29 0 chr20 32973938 32973973 -39179909 + (CGG)n Simple_repeat Simple_repeat 3 38 0 626 297 95 22 chr20 32974426 32974658 -39179224 - MIR SINE MIR -2 260 12 205 238 0 0 chr20 32974696 32974738 -39179144 + C-rich Low_complexity Low_complexity 5 46 0 425 303 25 0 chr20 32974751 32974873 -39179009 - L2 LINE L2 -1 3271 3147 198 250 0 0 chr20 32974942 32974982 -39178900 - L2 LINE L2 -69 3244 3205 1540 218 266 31 chr20 32975014 32975439 -39178443 + L2 LINE L2 1973 2297 -1017 1811 107 76 0 chr20 32975439 32975701 -39178181 + AluSx SINE Alu 18 299 -13 1540 218 266 31 chr20 32975701 32975949 -39177933 + L2 LINE L2 2297 2804 -510 194 310 17 0 chr20 32976054 32976112 -39177770 + L2 LINE L2 3214 3272 0 1661 135 50 8 chr20 32976115 32976374 -39177508 + AluJb SINE Alu 24 293 -19 399 280 28 19 chr20 32976442 32976549 -39177333 + MIR SINE MIR 30 137 -71 210 304 32 0 chr20 32977020 32977134 -39176748 + MIR SINE MIR 76 193 -69 2357 102 0 16 chr20 32977674 32977988 -39175894 - AluSg1 SINE Alu 0 309 1 224 262 0 0 chr20 32978238 32978280 -39175602 - L2 LINE L2 -15 3257 3216 367 289 21 10 chr20 32978297 32978394 -39175488 + L2 LINE L2 3174 3271 -1 2302 90 3 16 chr20 32978439 32978751 -39175131 - AluSc SINE Alu -1 308 1 609 214 8 8 chr20 32978754 32978871 -39175011 - MIR SINE MIR -115 147 31 477 228 57 70 chr20 32979094 32979252 -39174630 - L2 LINE L2 0 3313 3158 2332 107 0 0 chr20 32979263 32979561 -39174321 + AluSq SINE Alu 1 298 -15 728 175 9 22 chr20 32979756 32979979 -39173903 + CT-rich Low_complexity Low_complexity 1 220 0 1766 171 20 0 chr20 32979981 32980274 -39173608 - AluJb SINE Alu -2 310 12 240 329 57 32 chr20 32980330 32980488 -39173394 - MIR SINE MIR -55 207 46 622 249 176 54 chr20 32980939 32981292 -39172590 - MLT1J LTR MaLR -11 500 105 2137 142 0 0 chr20 32981312 32981615 -39172267 + AluSx SINE Alu 1 303 -9 838 136 0 0 chr20 32981619 32981737 -39172145 + FLAM_C SINE Alu 1 118 -15 258 32 0 0 chr20 32981740 32981771 -39172111 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 576 159 0 0 chr20 32981813 32981901 -39171981 + MER81 DNA DNA 1 88 -26 796 244 98 9 chr20 32982181 32982406 -39171476 - MIR SINE MIR -14 248 4 876 241 89 121 chr20 32982483 32982876 -39171006 - L2 LINE L2 -5 3308 2933 2102 126 17 3 chr20 32982876 32983170 -39170712 + AluSx SINE Alu 3 300 -12 876 241 89 121 chr20 32983170 32983309 -39170573 - L2 LINE L2 -380 2933 2791 474 282 60 60 chr20 32983300 32983601 -39170281 - L2 LINE L2 -165 3107 2807 * 200 348 109 22 chr20 32983856 32984040 -39169842 - L2 LINE L2 -354 2960 2761 * 937 265 22 9 chr20 32984027 32984257 -39169625 - MIR SINE MIR -12 250 18 517 200 35 9 chr20 32984783 32984898 -39168984 - MIR SINE MIR -72 190 73 508 236 157 39 chr20 32984934 32985233 -39168649 - MIR SINE MIR 0 262 25 211 200 0 0 chr20 32985244 32985274 -39168608 + (TAA)n Simple_repeat Simple_repeat 3 35 -12 1779 89 13 0 chr20 32985274 32985499 -39168383 + AluSx SINE Alu 1 228 -84 211 200 0 0 chr20 32985499 32985513 -39168369 + (TAA)n Simple_repeat Simple_repeat 34 47 0 294 188 43 0 chr20 32985572 32985641 -39168241 - MIR SINE MIR -143 119 48 354 281 93 22 chr20 32986743 32986882 -39167000 + MIR SINE MIR 105 253 -9 821 196 27 0 chr20 32987676 32987824 -39166058 - FRAM SINE Alu -24 152 1 628 324 75 16 chr20 32987888 32988458 -39165424 - L1P4 LINE L1 -351 5810 5197 843 173 62 34 chr20 32988477 32988587 -39165295 - MER5A DNA MER1_type -5 184 66 1879 108 90 11 chr20 32988587 32988864 -39165018 - AluSx SINE Alu -13 299 1 843 173 62 34 chr20 32988864 32988932 -39164950 - MER5A DNA MER1_type -123 66 1 461 266 104 26 chr20 32988987 32989141 -39164741 - MIR SINE MIR -96 166 1 611 322 106 14 chr20 32989887 32990235 -39163647 - L2 LINE L2 -2 3270 2891 520 261 90 63 chr20 32990252 32990474 -39163408 + MIR SINE MIR 23 250 -12 1538 149 38 8 chr20 32990627 32990923 -39162959 - AluJo SINE Alu 0 318 15 231 36 0 0 chr20 32991204 32991232 -39162650 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 184 107 0 0 chr20 32991257 32991285 -39162597 - L2 LINE L2 -95 3218 3191 2007 245 55 28 chr20 32991717 32992427 -39161455 + L1MC4a LINE L1 5210 5403 -743 450 53 0 0 chr20 32992705 32992762 -39161120 + (CA)n Simple_repeat Simple_repeat 2 58 0 1002 170 34 24 chr20 32992814 32993020 -39160862 + MLT1F1 LTR MaLR 299 506 -61 773 162 0 0 chr20 32993021 32993138 -39160744 + FLAM_C SINE Alu 2 118 -25 323 143 18 0 chr20 32993198 32993254 -39160628 + MLT1F1 LTR MaLR 511 567 0 202 0 0 83 chr20 32993265 32993301 -39160581 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1698 181 6 35 chr20 32993307 32993621 -39160261 - AluJo SINE Alu -5 307 3 257 247 43 75 chr20 32993742 32993835 -39160047 - L2 LINE L2 0 3313 3224 704 149 0 0 chr20 32993842 32993949 -39159933 + FLAM_A SINE Alu 20 126 -16 340 235 73 15 chr20 32993980 32994116 -39159766 + L1ME2 LINE L1 6011 6154 -10 1648 83 0 0 chr20 32994453 32994669 -39159213 + L1PA8 LINE L1 5957 6172 0 285 231 111 26 chr20 32994936 32995053 -39158829 - MIR3 SINE MIR -80 128 2 511 324 80 77 chr20 32995559 32995703 -39158179 + L2 LINE L2 2870 3012 -260 2066 122 31 0 chr20 32995703 32995990 -39157892 - AluSx SINE Alu -16 296 1 511 324 80 77 chr20 32995990 32996246 -39157636 + L2 LINE L2 3012 3271 -1 309 240 150 20 chr20 32996254 32996354 -39157528 + MIR SINE MIR 50 162 -100 * 352 248 62 56 chr20 32996353 32996514 -39157368 - L2 LINE L2 -104 3209 3048 409 234 36 36 chr20 32996965 32997076 -39156806 + MIR SINE MIR 8 118 -144 266 234 181 0 chr20 32997134 32997228 -39156654 - MIR SINE MIR -85 177 67 313 358 8 22 chr20 32997536 32997670 -39156212 - L1MC4a LINE L1 -1866 5942 5811 4493 164 36 14 chr20 32997679 32997888 -39155994 - L1MB8 LINE L1 -12 6166 5963 800 170 0 30 chr20 32997888 32998023 -39155859 - FLAM_A SINE Alu -2 131 1 4493 164 36 14 chr20 32998023 32998928 -39154954 - L1MB8 LINE L1 -215 5963 5030 1179 161 16 5 chr20 32998928 32999120 -39154762 + AluSg/x SINE Alu 86 279 -33 360 0 0 0 chr20 32999120 32999160 -39154722 + (CA)n Simple_repeat Simple_repeat 1 40 0 2896 163 73 51 chr20 32999160 32999856 -39154026 - L1MB8 LINE L1 -1107 5039 4325 1606 98 0 0 chr20 32999856 33000061 -39153821 - AluSq SINE Alu -20 293 89 2896 163 73 51 chr20 33000061 33000087 -39153795 - L1MB8 LINE L1 -1821 4325 4301 336 259 58 13 chr20 33000069 33000251 -39153631 - L1ME LINE L1 -275 5846 5656 * 1510 265 32 38 chr20 33000277 33000454 -39153428 + L2 LINE L2 2569 2746 -567 2152 118 10 3 chr20 33000454 33000751 -39153131 + AluSx SINE Alu 1 299 -13 1510 265 32 38 chr20 33000751 33001323 -39152559 + L2 LINE L2 2746 3313 0 507 299 142 0 chr20 33001324 33001521 -39152361 + L2 LINE L2 2716 2940 -374 308 200 44 67 chr20 33001526 33001596 -39152286 - MLT1F LTR MaLR 0 542 436 2423 101 0 0 chr20 33001596 33001904 -39151978 + AluSx SINE Alu 1 308 -4 308 200 44 67 chr20 33001904 33001923 -39151959 - MLT1F LTR MaLR -106 436 418 294 324 59 22 chr20 33002029 33002165 -39151717 + L2 LINE L2 3171 3311 -2 270 295 126 11 chr20 33002158 33002253 -39151629 - MIR SINE MIR -72 136 31 * 599 239 99 50 chr20 33002512 33002713 -39151169 - MIR SINE MIR -17 245 35 2313 104 13 0 chr20 33002746 33003055 -39150827 - AluSq SINE Alu 0 313 1 3112 187 41 21 chr20 33003228 33003337 -39150545 + L1ME1 LINE L1 5469 5574 -592 1874 164 10 0 chr20 33003337 33003641 -39150241 + AluJo SINE Alu 1 307 -5 3112 187 41 21 chr20 33003641 33004210 -39149672 + L1ME1 LINE L1 5574 6161 -5 1463 209 62 3 chr20 33004454 33004779 -39149103 + LTR16C LTR ERVL 147 490 -1 310 328 33 0 chr20 33004915 33005037 -39148845 + L1ME LINE L1 5682 5807 -355 782 186 0 0 chr20 33005174 33005292 -39148590 + FLAM_C SINE Alu 1 118 -15 729 186 8 0 chr20 33005306 33005424 -39148458 + 5S rRNA rRNA 1 119 -2 1121 136 21 5 chr20 33005513 33005704 -39148178 + MER20 DNA MER1_type 26 219 0 206 312 52 13 chr20 33005758 33005835 -39148047 - L2 LINE L2 -711 2603 2524 22 0 0 0 chr20 33007515 33007537 -39146345 + AT_rich Low_complexity Low_complexity 1 22 0 201 236 91 0 chr20 33007794 33007849 -39146033 + MIR SINE MIR 89 148 -114 473 265 22 65 chr20 33007948 33008074 -39145808 + MIR SINE MIR 76 193 -69 2464 88 0 0 chr20 33008074 33008380 -39145502 + AluSx SINE Alu 1 306 -6 473 265 22 65 chr20 33008380 33008438 -39145444 + MIR SINE MIR 193 252 -10 831 166 89 0 chr20 33008469 33008638 -39145244 - MER5A DNA MER1_type -5 184 1 1282 83 0 6 chr20 33009057 33009225 -39144657 + AluSp SINE Alu 147 313 0 2407 43 0 0 chr20 33009245 33009543 -39144339 + AluY SINE Alu 3 300 0 317 383 43 14 chr20 33009657 33009866 -39144016 - L1MC/D LINE L1 -1972 5836 5622 380 253 55 25 chr20 33010128 33010330 -39143552 - L1ME4a LINE L1 -153 5968 5761 3284 163 35 58 chr20 33010372 33010950 -39142932 - L1MB5 LINE L1 -1 6173 5614 2468 54 0 10 chr20 33010950 33011248 -39142634 + AluY SINE Alu 1 295 -16 3284 163 35 58 chr20 33011248 33011406 -39142476 - L1MB5 LINE L1 -560 5614 5454 336 291 58 10 chr20 33011524 33011627 -39142255 + L2 LINE L2 3186 3293 -20 508 250 66 55 chr20 33011729 33011985 -39141897 + MER102b DNA MER1_type 81 339 -2 2061 148 3 0 chr20 33012037 33012335 -39141547 + AluJb SINE Alu 1 299 -13 344 180 0 0 chr20 33012335 33012396 -39141486 - MIR SINE MIR -79 129 69 320 311 12 9 chr20 33012819 33012955 -39140927 + MIR SINE MIR 7 141 -67 2237 95 10 3 chr20 33012968 33013263 -39140619 + AluSq SINE Alu 1 297 -16 375 23 0 0 chr20 33013324 33013368 -39140514 + (CA)n Simple_repeat Simple_repeat 2 45 0 1936 211 68 23 chr20 33013387 33013857 -39140025 - LTR16C LTR ERVL 0 491 1 523 178 22 35 chr20 33013998 33014230 -39139652 + CT-rich Low_complexity Low_complexity 1 229 0 1916 141 30 30 chr20 33014230 33014534 -39139348 - AluJo SINE Alu -8 304 1 225 200 50 17 chr20 33014787 33014847 -39139035 - Charlie8 DNA MER1_type -2162 255 194 2155 117 0 66 chr20 33014928 33015261 -39138621 - AluSx SINE Alu -1 311 1 960 229 76 113 chr20 33015456 33015691 -39138191 - LTR16B LTR ERVL -5 459 250 2516 84 0 0 chr20 33015691 33016000 -39137882 - AluSg SINE Alu -1 309 1 960 229 76 113 chr20 33016000 33016240 -39137642 - LTR16B LTR ERVL -214 250 2 707 247 93 48 chr20 33016248 33016655 -39137227 - L2 LINE L2 -173 3140 2714 2419 90 0 0 chr20 33016655 33016956 -39136926 - AluSx SINE Alu -9 303 3 707 247 93 48 chr20 33016956 33016983 -39136899 - L2 LINE L2 -599 2714 2690 223 286 24 37 chr20 33016973 33017065 -39136817 - MIR SINE MIR -130 78 3 * 280 260 167 10 chr20 33017772 33017868 -39136014 + MIR SINE MIR 34 144 -64 1690 182 25 3 chr20 33017981 33018267 -39135615 - AluJo SINE Alu -20 292 1 324 242 113 24 chr20 33018464 33018588 -39135294 - MLT1K LTR MaLR 0 588 454 705 295 22 37 chr20 33018645 33018711 -39135171 - MLT1K LTR MaLR -317 271 206 2317 81 37 3 chr20 33018711 33019008 -39134874 - AluSx SINE Alu -1 311 5 705 295 22 37 chr20 33019008 33019209 -39134673 - MLT1K LTR MaLR -382 206 8 594 288 6 6 chr20 33019216 33019376 -39134506 - MIR3 SINE MIR -39 169 10 565 259 7 22 chr20 33019789 33019924 -39133958 - MIR SINE MIR -60 148 16 451 275 25 8 chr20 33019930 33020050 -39133832 - MER5A DNA MER1_type -2 187 66 1858 255 39 26 chr20 33020053 33020622 -39133260 - MLT1K LTR MaLR -3 585 10 383 215 239 31 chr20 33020657 33020787 -39133095 - MER5A DNA MER1_type -29 160 4 2298 113 7 3 chr20 33021022 33021331 -39132551 - AluSx SINE Alu -2 310 1 1094 121 65 23 chr20 33021937 33022152 -39131730 - L1MB3 LINE L1 -7 6176 5953 189 0 0 0 chr20 33022250 33022271 -39131611 + (T)n Simple_repeat Simple_repeat 1 21 0 224 302 0 47 chr20 33022333 33022419 -39131463 - L2 LINE L2 0 3313 3232 882 194 79 2 chr20 33022434 33022692 -39131190 + MER33 DNA MER1_type 1 253 -71 259 99 42 70 chr20 33022718 33022733 -39131149 + A-rich Low_complexity Low_complexity 1 15 -54 2227 106 0 22 chr20 33022733 33023053 -39130829 + AluSp SINE Alu 1 313 0 259 99 42 70 chr20 33023053 33023108 -39130774 + A-rich Low_complexity Low_complexity 15 69 0 180 0 0 0 chr20 33023127 33023147 -39130735 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1600 148 29 81 chr20 33023362 33023672 -39130210 + AluJb SINE Alu 1 294 -18 300 300 118 0 chr20 33023845 33023955 -39129927 - MIR SINE MIR -10 252 130 194 184 0 0 chr20 33024112 33024150 -39129732 - MIR SINE MIR -89 119 82 1168 275 108 26 chr20 33024798 33025542 -39128340 + L2 LINE L2 2493 3313 0 494 155 0 47 chr20 33025576 33025724 -39128158 + GA-rich Low_complexity Low_complexity 2 142 0 325 238 24 0 chr20 33027008 33027092 -39126790 - MIR SINE MIR -11 251 166 1141 138 11 16 chr20 33027120 33027309 -39126573 + AluJo SINE Alu 122 309 -3 2002 104 82 0 chr20 33027561 33027840 -39126042 + AluSg SINE Alu 1 302 -8 184 378 63 0 chr20 33027858 33027985 -39125897 + MIR3 SINE MIR 62 196 -12 474 286 169 48 chr20 33029484 33029840 -39124042 + L2 LINE L2 2910 3308 -5 2022 137 0 32 chr20 33029908 33030221 -39123661 - AluJb SINE Alu -9 303 1 249 277 119 0 chr20 33030231 33030332 -39123550 - L2 LINE L2 -1 3271 3159 524 15 15 0 chr20 33030401 33030466 -39123416 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 2097 107 7 20 chr20 33030759 33031057 -39122825 + AluSx SINE Alu 1 294 -18 431 203 209 38 chr20 33031346 33031504 -39122378 - MER5A DNA MER1_type -4 185 1 2187 121 7 0 chr20 33031522 33031827 -39122055 + AluSx SINE Alu 1 307 -5 279 0 0 0 chr20 33032230 33032261 -39121621 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2236 79 11 0 chr20 33032263 33032540 -39121342 - AluSp SINE Alu -31 282 3 329 294 123 16 chr20 33032543 33032730 -39121152 - L1MC/D LINE L1 -1983 5825 5619 2359 54 0 37 chr20 33032742 33033063 -39120819 - AluY SINE Alu 0 310 1 891 232 0 37 chr20 33033151 33033293 -39120589 + MIR SINE MIR 2 137 -125 2342 115 0 0 chr20 33033293 33033598 -39120284 + AluSx SINE Alu 1 305 -7 891 232 0 37 chr20 33033598 33033645 -39120237 + MIR SINE MIR 137 184 -78 355 292 9 24 chr20 33033649 33033772 -39120110 - MIR SINE MIR -59 149 45 589 299 140 0 chr20 33033976 33034183 -39119699 + MER69 DNA AcHobo 1 236 -2290 295 202 21 75 chr20 33034191 33034285 -39119597 + MER69 DNA AcHobo 2436 2524 -2 2259 99 0 10 chr20 33034888 33035215 -39118667 - AluSc SINE Alu 0 309 1 1545 172 3 65 chr20 33035217 33035507 -39118375 - AluJb SINE Alu -17 295 24 1530 184 0 4 chr20 33035564 33035825 -39118057 + AluJo SINE Alu 41 300 -12 900 190 41 36 chr20 33036760 33036955 -39116927 + MIR SINE MIR 10 205 -57 414 182 129 77 chr20 33037018 33037078 -39116804 - MIR SINE MIR -20 242 187 2174 123 0 0 chr20 33037078 33037378 -39116504 + AluSx SINE Alu 1 300 -12 414 182 129 77 chr20 33037378 33037487 -39116395 - MIR SINE MIR -75 187 64 538 114 0 0 chr20 33037536 33037615 -39116267 + MADE1 DNA Mariner 2 80 0 2458 176 86 2 chr20 33037619 33038085 -39115797 - MLT1D LTR MaLR 0 505 1 686 222 51 40 chr20 33038253 33038503 -39115379 - MIR SINE MIR -1 261 3 194 121 61 0 chr20 33039650 33039683 -39114199 - L2 LINE L2 -24 3248 3214 2052 133 0 10 chr20 33039949 33040258 -39113624 + AluSg SINE Alu 1 306 -4 433 319 56 19 chr20 33040381 33040714 -39113168 - L2 LINE L2 -228 3044 2699 2294 67 0 0 chr20 33040720 33041026 -39112856 - AluY SINE Alu 0 317 12 474 269 23 63 chr20 33041038 33041213 -39112669 - MIR SINE MIR -74 188 21 1523 168 60 47 chr20 33042020 33042173 -39111709 - AluJo SINE Alu 0 302 153 189 74 0 0 chr20 33042173 33042200 -39111682 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1429 172 49 49 chr20 33042200 33042364 -39111518 - AluJo SINE Alu -27 285 119 2333 91 0 3 chr20 33042364 33042660 -39111222 - AluY SINE Alu -16 295 1 1429 172 49 49 chr20 33042660 33042780 -39111102 - AluJo SINE Alu -192 120 1 1523 168 60 47 chr20 33042780 33042923 -39110959 - AluJo SINE Alu -148 154 1 296 44 0 22 chr20 33043206 33043251 -39110631 - MADE1 DNA Mariner -1 79 36 464 209 104 0 chr20 33043576 33043691 -39110191 - MLT1H1 LTR MaLR -7 548 422 262 129 48 48 chr20 33044019 33044081 -39109801 - MIR SINE MIR -100 162 101 386 317 41 0 chr20 33044109 33044232 -39109650 - L2 LINE L2 -24 3289 3162 621 263 88 29 chr20 33044481 33044686 -39109196 - L2 LINE L2 -194 3078 2862 204 224 52 17 chr20 33045307 33045365 -39108517 + MIR3 SINE MIR 147 206 -2 304 296 102 10 chr20 33045532 33045630 -39108252 + MIR SINE MIR 30 136 -72 504 280 171 19 chr20 33045655 33045866 -39108016 - MIR SINE MIR -19 243 1 501 300 12 25 chr20 33046013 33046173 -39107709 + MIR SINE MIR 12 169 -93 1411 188 70 44 chr20 33046426 33046724 -39107158 + AluJo SINE Alu 5 310 -2 191 306 0 0 chr20 33047030 33047079 -39106803 + MIR SINE MIR 125 173 -89 947 281 78 11 chr20 33047235 33047656 -39106226 + L2 LINE L2 2656 3112 -201 2305 117 0 0 chr20 33047656 33047963 -39105919 - AluSx SINE Alu -5 307 1 947 281 78 11 chr20 33047963 33047995 -39105887 + L2 LINE L2 3112 3140 -173 414 100 0 0 chr20 33048209 33048269 -39105613 + (TG)n Simple_repeat Simple_repeat 2 61 0 653 234 35 74 chr20 33048998 33049116 -39104766 + L1ME3 LINE L1 5703 5824 -340 1609 181 3 28 chr20 33049116 33049403 -39104479 + AluJo SINE Alu 1 280 -32 1301 67 0 6 chr20 33049404 33049582 -39104300 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 653 234 35 74 chr20 33049582 33049717 -39104165 + L1ME3 LINE L1 5823 5948 -216 * 2029 158 62 62 chr20 33049712 33049980 -39103902 + L1MB8 LINE L1 5680 5950 -228 2297 102 7 3 chr20 33049980 33050275 -39103607 - AluSx SINE Alu -16 296 1 2029 158 62 62 chr20 33050275 33050505 -39103377 + L1MB8 LINE L1 5949 6178 0 250 245 0 0 chr20 33050508 33050561 -39103321 + L1ME3 LINE L1 5937 5989 -173 2079 126 0 0 chr20 33050576 33050903 -39102979 - AluSx SINE Alu 0 332 6 2493 79 0 10 chr20 33050935 33051240 -39102642 + AluSg SINE Alu 1 302 -8 1742 182 0 0 chr20 33051240 33051514 -39102368 - AluJo SINE Alu -31 281 7 594 269 5 16 chr20 33051524 33051710 -39102172 + L1ME3 LINE L1 5979 6162 0 2037 158 0 0 chr20 33051716 33052013 -39101869 + AluJo SINE Alu 1 297 -15 2388 89 0 6 chr20 33052016 33052329 -39101553 + AluY SINE Alu 1 311 0 246 116 0 0 chr20 33052433 33052476 -39101406 + (CA)n Simple_repeat Simple_repeat 2 44 0 306 316 0 0 chr20 33052476 33052590 -39101292 + L1M4 LINE L1 2703 2816 -3330 1597 162 46 46 chr20 33052614 33052739 -39101143 + AluJo SINE Alu 2 126 -186 1816 132 64 0 chr20 33052739 33053049 -39100833 - AluSx SINE Alu 0 327 1 1597 162 46 46 chr20 33053049 33053225 -39100657 + AluJo SINE Alu 125 304 -8 978 267 53 53 chr20 33053902 33054069 -39099813 + L2 LINE L2 2322 2488 -826 2613 68 0 0 chr20 33054069 33054376 -39099506 - AluSx SINE Alu -5 307 1 978 267 53 53 chr20 33054376 33054620 -39099262 + L2 LINE L2 2487 2733 -581 1797 174 0 26 chr20 33054621 33054926 -39098956 - AluJo SINE Alu -15 297 1 454 278 224 31 chr20 33054976 33055400 -39098482 - L2 LINE L2 -600 2714 2209 295 250 54 35 chr20 33055704 33055888 -39097994 - MLT1L LTR MaLR -249 366 113 262 217 0 84 chr20 33056354 33056437 -39097445 + MIR3 SINE MIR 118 193 -15 943 190 0 6 chr20 33056695 33056858 -39097024 + FRAM SINE Alu 2 163 -3 925 218 98 37 chr20 33056941 33057021 -39096861 - MLT1D LTR MaLR 0 626 552 2148 117 3 0 chr20 33057021 33057303 -39096579 + AluSx SINE Alu 1 283 -29 237 65 0 0 chr20 33057303 33057334 -39096548 + (CATA)n Simple_repeat Simple_repeat 2 32 0 925 218 98 37 chr20 33057334 33057366 -39096516 - MLT1D LTR MaLR -74 552 523 240 35 0 0 chr20 33057366 33057395 -39096487 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 925 218 98 37 chr20 33057395 33057773 -39096109 - MLT1D LTR MaLR -103 523 7 305 272 48 48 chr20 33058497 33058642 -39095240 + MLT1I LTR MaLR 58 240 -265 2051 160 30 52 chr20 33058969 33059079 -39094803 + L1MC2 LINE L1 5093 5204 -1140 2453 103 0 0 chr20 33059079 33059390 -39094492 + AluSq SINE Alu 1 311 -2 2051 160 30 52 chr20 33059390 33059886 -39093996 + L1MC2 LINE L1 5204 5828 -516 1805 165 3 32 chr20 33059895 33060204 -39093678 + AluJo SINE Alu 4 303 -9 2047 128 21 0 chr20 33060208 33060496 -39093386 + AluJb SINE Alu 1 294 -18 2044 142 0 16 chr20 33060497 33060807 -39093075 + AluSx SINE Alu 1 305 -7 2274 110 0 3 chr20 33060809 33061119 -39092763 + AluSq SINE Alu 1 309 -4 233 125 54 0 chr20 33061132 33061188 -39092694 + (TA)n Simple_repeat Simple_repeat 2 60 0 2462 144 62 13 chr20 33061217 33061993 -39091889 - L1M2 LINE L1 -574 5738 4922 678 168 14 7 chr20 33061993 33062134 -39091748 + L1MB4 LINE L1 6037 6180 0 2152 124 0 29 chr20 33062140 33062455 -39091427 + AluSx SINE Alu 1 306 -6 287 310 14 0 chr20 33062455 33062526 -39091356 - MIR SINE MIR -163 99 28 580 264 120 30 chr20 33062897 33063339 -39090543 - MLT1H LTR MaLR -104 451 1 318 271 33 53 chr20 33063541 33063694 -39090188 - MIR SINE MIR -45 217 69 225 247 86 0 chr20 33063848 33063929 -39089953 - MIR SINE MIR -71 191 104 224 231 39 51 chr20 33063938 33064016 -39089866 - L2 LINE L2 -78 3235 3159 501 246 10 80 chr20 33065131 33065330 -39088552 - MER5A DNA MER1_type -3 186 2 989 304 98 35 chr20 33066161 33066618 -39087264 - L2 LINE L2 0 3313 2828 1552 156 67 32 chr20 33066847 33067130 -39086752 + AluJb SINE Alu 2 294 -18 2249 123 7 0 chr20 33067132 33067440 -39086442 + AluSx SINE Alu 1 310 -2 2374 158 65 38 chr20 33068358 33068885 -39084997 - L1MB7 LINE L1 0 6184 5644 2039 140 10 16 chr20 33069042 33069350 -39084532 - AluJo SINE Alu -5 307 2 472 265 42 54 chr20 33069499 33069665 -39084217 + MIR3 SINE MIR 10 173 -35 196 288 0 34 chr20 33070361 33070420 -39083462 + MIR SINE MIR 39 95 -113 * 318 307 52 26 chr20 33070412 33070487 -39083395 + MIR SINE MIR 63 135 -127 627 149 35 28 chr20 33070487 33070526 -39083356 - L1MB4 LINE L1 0 6180 6143 2330 105 0 25 chr20 33070526 33070840 -39083042 - AluSx SINE Alu -6 306 1 627 149 35 28 chr20 33070840 33070941 -39082941 - L1MB4 LINE L1 -37 6143 6039 318 307 52 26 chr20 33070941 33071018 -39082864 + MIR SINE MIR 135 219 -43 230 0 33 0 chr20 33071360 33071390 -39082492 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 408 125 0 0 chr20 33071543 33071607 -39082275 + (T)n Simple_repeat Simple_repeat 1 64 0 2141 107 7 19 chr20 33071657 33071965 -39081917 + AluSx SINE Alu 2 305 -7 699 126 0 59 chr20 33073149 33073268 -39080614 - FRAM SINE Alu -14 162 51 1769 154 29 4 chr20 33073306 33073644 -39080238 - AluJb SINE Alu 0 348 4 258 154 0 62 chr20 33073703 33073768 -39080114 + L1MA8 LINE L1 6220 6280 -11 332 195 0 0 chr20 33073771 33073837 -39080045 + Alu SINE Alu 1 49 -251 * 440 17 0 17 chr20 33073835 33073895 -39079987 - MSTB1 LTR MaLR -15 417 359 1186 182 0 10 chr20 33073895 33074093 -39079789 + AluJb SINE Alu 1 196 -116 5869 196 70 30 chr20 33074094 33075838 -39078044 - L1MB7 LINE L1 -716 5462 3659 6658 77 15 32 chr20 33075922 33077931 -39075951 - SVA Other Other -518 1384 1 213 39 0 0 chr20 33077933 33077959 -39075923 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 235 308 149 0 chr20 33078092 33078287 -39075595 - L1MC/D LINE L1 -2331 5477 5254 198 0 0 0 chr20 33078564 33078586 -39075296 + (TA)n Simple_repeat Simple_repeat 2 23 0 1587 176 35 28 chr20 33078586 33078876 -39075006 - AluJo SINE Alu -20 292 1 205 286 36 24 chr20 33079191 33079275 -39074607 + MIR SINE MIR 38 122 -86 2302 118 0 0 chr20 33079309 33079605 -39074277 - AluSx SINE Alu -16 296 1 202 204 0 23 chr20 33079651 33079695 -39074187 + (CTTTG)n Simple_repeat Simple_repeat 3 45 0 691 242 102 42 chr20 33079948 33080163 -39073719 - MIR SINE MIR -15 247 20 606 167 313 0 chr20 33080173 33080317 -39073565 + MER5A DNA MER1_type 1 189 0 1988 122 58 7 chr20 33080393 33080688 -39073194 - AluJb SINE Alu -2 310 1 351 0 0 0 chr20 33080787 33080826 -39073056 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 330 53 11 chr20 33080826 33080920 -39072962 + L2 LINE L2 2682 2779 -535 668 213 131 0 chr20 33080924 33081084 -39072798 + MER5A DNA MER1_type 4 187 -2 328 210 16 0 chr20 33081383 33081445 -39072437 + L2 LINE L2 3242 3304 -9 2363 89 7 0 chr20 33081449 33081752 -39072130 - AluSq SINE Alu -8 305 1 700 243 128 31 chr20 33081772 33081998 -39071884 + MIR SINE MIR 15 262 0 389 226 107 79 chr20 33082060 33082237 -39071645 + MIR SINE MIR 58 239 -23 189 258 48 32 chr20 33082789 33082851 -39071031 - MIR SINE MIR -65 143 81 198 304 122 35 chr20 33083036 33083151 -39070731 - MER5A DNA MER1_type 0 189 65 2216 115 36 17 chr20 33083151 33083507 -39070375 - L1PB4 LINE L1 0 6156 5794 333 0 0 0 chr20 33083509 33083546 -39070336 + (TG)n Simple_repeat Simple_repeat 2 38 0 1888 163 7 3 chr20 33083930 33084224 -39069658 + AluJo SINE Alu 1 295 -17 311 295 85 44 chr20 33084229 33084316 -39069566 - L1ME LINE L1 -297 5824 5742 2056 111 48 7 chr20 33084316 33084605 -39069277 - AluSx SINE Alu -11 301 1 311 295 85 44 chr20 33084605 33084812 -39069070 - L1ME LINE L1 -379 5742 5518 723 161 0 0 chr20 33085615 33085739 -39068143 + L1MD3 LINE L1 7872 7995 0 252 0 0 0 chr20 33086200 33086228 -39067654 + (TG)n Simple_repeat Simple_repeat 2 29 0 192 97 0 0 chr20 33086228 33086259 -39067623 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 1097 224 142 73 chr20 33086569 33086844 -39067038 - L2 LINE L2 -14 3299 2979 1922 141 39 0 chr20 33086844 33087127 -39066755 + AluSq SINE Alu 5 298 -15 1097 224 142 73 chr20 33087127 33087303 -39066579 - L2 LINE L2 -334 2979 2817 366 242 5 59 chr20 33087968 33088154 -39065728 + (TCTCTG)n Simple_repeat Simple_repeat 4 179 0 487 288 74 70 chr20 33088324 33088543 -39065339 - MIR SINE MIR -6 256 34 1835 155 0 28 chr20 33088543 33088833 -39065049 - AluJo SINE Alu -30 282 1 487 288 74 70 chr20 33088833 33088856 -39065026 - MIR SINE MIR -228 34 13 660 234 179 21 chr20 33089143 33089379 -39064503 + MER46C DNA MER2_type 2 294 -44 2296 107 0 0 chr20 33089379 33089670 -39064212 - AluSx SINE Alu 0 312 22 660 234 179 21 chr20 33089670 33089724 -39064158 + MER46C DNA MER2_type 294 338 0 330 282 106 49 chr20 33089890 33090032 -39063850 - L1ME4a LINE L1 -247 5874 5725 713 269 129 47 chr20 33090038 33090440 -39063442 - L2 LINE L2 -1 3312 2878 382 273 29 29 chr20 33090440 33090579 -39063303 - L1ME4a LINE L1 -402 5719 5581 393 290 43 22 chr20 33090954 33091092 -39062790 - MIR SINE MIR 0 262 122 229 185 222 62 chr20 33091488 33091569 -39062313 - L2 LINE L2 -21 3292 3199 197 205 154 39 chr20 33092115 33092193 -39061689 + MIR SINE MIR 83 169 -93 387 314 59 7 chr20 33092219 33092372 -39061510 + L2 LINE L2 3099 3259 -13 183 42 0 0 chr20 33092434 33092458 -39061424 + (CAT)n Simple_repeat Simple_repeat 1 24 0 648 215 132 83 chr20 33092467 33092695 -39061187 - MIR SINE MIR -20 242 4 282 406 0 8 chr20 33092736 33092859 -39061023 - MIR SINE MIR -121 141 20 1934 126 0 86 chr20 33093079 33093404 -39060478 + AluSx SINE Alu 15 311 -1 182 311 189 0 chr20 33093576 33093666 -39060216 + MIR SINE MIR 37 143 -65 357 276 232 59 chr20 33093926 33094825 -39059057 + L2 LINE L2 2211 3272 0 183 325 65 0 chr20 33095130 33095207 -39058675 - L2 LINE L2 -54 3218 3137 571 231 137 16 chr20 33095275 33095457 -39058425 - MIR SINE MIR -10 252 49 2509 79 3 0 chr20 33095655 33095960 -39057922 + AluY SINE Alu 1 306 -5 314 206 284 0 chr20 33096896 33096998 -39056884 + MIR SINE MIR 12 142 -120 259 261 77 39 chr20 33097472 33097602 -39056280 - L2 LINE L2 -486 2828 2694 258 295 107 8 chr20 33098031 33098155 -39055727 - MIR SINE MIR -69 139 58 373 223 69 62 chr20 33098608 33098660 -39055222 + L2 LINE L2 3142 3192 -80 2296 113 0 0 chr20 33098660 33098962 -39054920 - AluSg SINE Alu -8 302 1 373 223 69 62 chr20 33098962 33099039 -39054843 + L2 LINE L2 3192 3272 0 1676 181 25 35 chr20 33099346 33099661 -39054221 + AluJo SINE Alu 1 312 0 773 272 92 34 chr20 33100381 33100675 -39053207 - L2 LINE L2 -1 3312 3002 206 281 115 21 chr20 33100798 33100894 -39052988 - MIR SINE MIR 0 262 158 191 279 207 14 chr20 33101040 33101180 -39052702 - L2 LINE L2 -255 3017 2851 2166 108 10 7 chr20 33101701 33101996 -39051886 - AluSc SINE Alu -13 296 1 302 296 124 44 chr20 33102008 33102258 -39051624 + L1ME4a LINE L1 5017 5286 -860 2272 131 0 0 chr20 33102289 33102594 -39051288 + AluSx SINE Alu 1 305 -7 1688 133 8 0 chr20 33102607 33102855 -39051027 + AluSx SINE Alu 59 308 -4 263 276 67 80 chr20 33102927 33103152 -39050730 + L1ME4a LINE L1 5383 5604 -517 857 165 0 0 chr20 33103154 33103287 -39050595 + FLAM_C SINE Alu 1 133 0 2659 59 0 0 chr20 33103382 33103688 -39050194 - AluY SINE Alu -5 306 1 230 260 244 4 chr20 33103689 33103939 -39049943 + L1ME4a LINE L1 5796 6105 -16 643 296 44 15 chr20 33104871 33105077 -39048805 + MIR SINE MIR 31 242 -20 192 40 0 0 chr20 33105254 33105279 -39048603 + (CTGGGG)n Simple_repeat Simple_repeat 5 29 0 291 218 167 0 chr20 33105782 33105860 -39048022 + MIR3 SINE MIR 108 198 -10 1342 111 0 0 chr20 33106387 33106568 -39047314 - AluSp SINE Alu 0 313 133 2496 75 0 28 chr20 33106568 33106888 -39046994 - AluY SINE Alu 0 311 1 241 274 167 20 chr20 33107799 33107901 -39045981 + MIR SINE MIR 30 146 -62 1940 159 17 0 chr20 33108186 33108482 -39045400 + AluJo SINE Alu 2 302 -10 497 260 39 64 chr20 33108562 33108766 -39045116 + MIR SINE MIR 3 201 -61 1519 147 37 16 chr20 33108858 33109103 -39044779 - AluJb SINE Alu -6 306 57 2367 93 3 0 chr20 33109171 33109471 -39044411 - AluSx SINE Alu -11 301 1 436 278 32 117 chr20 33109484 33109732 -39044150 - L2 LINE L2 -50 3222 2996 271 274 68 27 chr20 33110715 33110861 -39043021 - L1ME4a LINE L1 -23 6098 5947 199 244 39 13 chr20 33110889 33110967 -39042915 - MIR SINE MIR 0 262 183 1202 126 55 0 chr20 33111106 33111305 -39042577 + MER2 DNA MER2_type 1 210 -135 1724 146 40 40 chr20 33111324 33111625 -39042257 - AluJb SINE Alu -11 301 1 2142 111 0 60 chr20 33111638 33111971 -39041911 - AluSq SINE Alu 0 313 1 317 225 62 0 chr20 33112041 33112121 -39041761 - L1ME4a LINE L1 -177 5944 5860 382 167 15 0 chr20 33112935 33113001 -39040881 + MIR SINE MIR 87 153 -109 233 358 67 0 chr20 33113299 33113419 -39040463 + MIR SINE MIR 64 191 -71 2432 81 0 3 chr20 33113419 33113716 -39040166 + AluSg SINE Alu 1 296 -14 191 250 36 18 chr20 33114275 33114331 -39039551 + MIR SINE MIR 82 138 -70 656 255 26 81 chr20 33115170 33115387 -39038495 + MIR SINE MIR 7 208 -54 2492 78 0 7 chr20 33115387 33115696 -39038186 + AluSc SINE Alu 1 307 -2 656 255 26 81 chr20 33115696 33115749 -39038133 + MIR SINE MIR 208 262 0 538 167 87 16 chr20 33115761 33115887 -39037995 - L1ME1 LINE L1 0 6166 6032 429 264 114 50 chr20 33116304 33116524 -39037358 + L1M4 LINE L1 2940 3173 -2973 574 299 62 68 chr20 33117002 33117124 -39036758 - L3 LINE CR1 -7 1570 1449 1262 136 61 9 chr20 33117124 33117337 -39036545 + MER58A DNA MER1_type 1 224 0 574 299 62 68 chr20 33117337 33117522 -39036360 - L3 LINE CR1 -128 1449 1265 240 178 14 55 chr20 33117523 33117596 -39036286 - MLT1K LTR MaLR -2 586 517 262 245 38 57 chr20 33117598 33117704 -39036178 - MLT1K LTR MaLR -47 541 438 2168 83 4 7 chr20 33117710 33117988 -39035894 + AluSc SINE Alu 27 303 -6 321 224 0 30 chr20 33117989 33118056 -39035826 + L1MC4 LINE L1 6652 6716 -1326 341 318 15 15 chr20 33118064 33118196 -39035686 - MLT1K LTR MaLR -175 413 282 2395 86 3 0 chr20 33118325 33118629 -39035253 - AluSx SINE Alu -7 305 1 1499 195 43 14 chr20 33118959 33119241 -39034641 + AluJo SINE Alu 1 290 -22 26 50 0 0 chr20 33121883 33121923 -39031959 + AT_rich Low_complexity Low_complexity 1 40 0 477 249 106 110 chr20 33122289 33122763 -39031119 - MLT1K LTR MaLR -3 473 2 536 281 63 104 chr20 33122763 33122809 -39031073 - MLT1K LTR MaLR -24 564 67 488 226 24 101 chr20 33122905 33123073 -39030809 - MIR SINE MIR -13 249 95 189 0 0 0 chr20 33123183 33123204 -39030678 + (TG)n Simple_repeat Simple_repeat 2 22 0 276 264 124 66 chr20 33123204 33123325 -39030557 - L1MA10 LINE L1 -40 6294 6167 1835 107 67 130 chr20 33123354 33123685 -39030197 + MSTB1 LTR MaLR 14 364 -68 580 182 33 8 chr20 33123685 33123806 -39030076 + FLAM_A SINE Alu 2 125 -8 1835 107 67 130 chr20 33123806 33123836 -39030046 + MSTB1 LTR MaLR 364 394 -38 2031 107 79 0 chr20 33123836 33124116 -39029766 + AluSx SINE Alu 1 302 -10 1835 107 67 130 chr20 33124116 33124200 -39029682 + MSTB1 LTR MaLR 394 432 0 268 274 32 11 chr20 33124200 33124295 -39029587 - L1ME2 LINE L1 -169 6064 5968 1240 166 63 107 chr20 33125561 33126065 -39027817 - L1ME2 LINE L1 -557 5678 5193 729 161 0 36 chr20 33126065 33126202 -39027680 - FLAM_A SINE Alu -1 132 1 1240 166 63 107 chr20 33126202 33126272 -39027610 - L1ME2 LINE L1 -1042 5193 5121 1543 191 17 20 chr20 33126275 33126568 -39027314 - AluJo SINE Alu -8 304 13 1727 175 19 19 chr20 33126594 33126902 -39026980 - AluJo SINE Alu -4 308 1 1795 177 43 47 chr20 33126904 33127083 -39026799 - L1ME2 LINE L1 -1582 4633 4455 2270 73 49 0 chr20 33127083 33127369 -39026513 - AluSp SINE Alu -11 302 3 1795 177 43 47 chr20 33127369 33127382 -39026500 - L1ME2 LINE L1 -1760 4455 4443 2013 152 0 13 chr20 33127382 33127691 -39026191 - AluSx SINE Alu -7 305 1 1795 177 43 47 chr20 33127691 33127982 -39025900 - L1ME2 LINE L1 -1772 4443 4151 2047 113 17 17 chr20 33127982 33128314 -39025568 - AluSx SINE Alu 0 312 1 2885 215 99 8 chr20 33128324 33129195 -39024687 - L1ME2 LINE L1 -3044 3171 2222 2393 91 7 0 chr20 33129196 33129493 -39024389 - AluSx SINE Alu -13 299 1 362 193 0 68 chr20 33129493 33129581 -39024301 - L1ME2 LINE L1 -5321 1075 994 774 143 20 0 chr20 33129582 33129729 -39024153 - L1MB4 LINE L1 -2 6178 6029 2294 96 7 10 chr20 33129730 33130031 -39023851 + AluSx SINE Alu 1 300 -12 459 52 0 0 chr20 33130032 33130090 -39023792 + (CCCCCT)n Simple_repeat Simple_repeat 3 60 0 5619 66 29 48 chr20 33130090 33131130 -39022752 + SVA Other Other 58 868 -520 1937 91 13 74 chr20 33131197 33131659 -39022223 + SVA Other Other 433 866 -520 3468 76 25 67 chr20 33131676 33132317 -39021565 + SVA Other Other 433 1046 -340 182 62 31 0 chr20 33132318 33132350 -39021532 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3566 168 64 24 chr20 33132352 33132569 -39021313 - L1MB3 LINE L1 -143 6040 5833 2059 118 3 35 chr20 33132569 33132882 -39021000 + AluSx SINE Alu 1 303 -9 3566 168 64 24 chr20 33132882 33133514 -39020368 - L1MB3 LINE L1 -350 5833 5145 919 205 0 0 chr20 33133514 33133675 -39020207 - FAM SINE Alu -14 161 1 3566 168 64 24 chr20 33133675 33134008 -39019874 - L1MB3 LINE L1 -1038 5145 4826 2712 250 62 24 chr20 33134005 33134908 -39018974 - L1ME2 LINE L1 -5425 971 35 * 2325 98 3 13 chr20 33134917 33135223 -39018659 - AluSq SINE Alu -10 303 1 1859 132 3 51 chr20 33135284 33135451 -39018431 - AluJb SINE Alu 0 301 153 2579 51 0 35 chr20 33135451 33135763 -39018119 - AluY SINE Alu -10 301 1 1859 132 3 51 chr20 33135763 33135910 -39017972 - AluJb SINE Alu -148 153 1 555 298 148 23 chr20 33136266 33136571 -39017311 + MLT1L LTR MaLR 173 515 -100 200 304 14 29 chr20 33137337 33137406 -39016476 + L3 LINE CR1 1387 1454 -123 881 231 159 50 chr20 33137508 33137591 -39016291 - L2 LINE L2 0 3313 3240 2218 115 14 0 chr20 33137591 33137886 -39015996 + AluSx SINE Alu 3 301 -11 881 231 159 50 chr20 33137886 33138172 -39015710 - L2 LINE L2 -73 3240 2987 2131 143 0 3 chr20 33138172 33138466 -39015416 + AluJb SINE Alu 1 293 -19 881 231 159 50 chr20 33138466 33138665 -39015217 - L2 LINE L2 -326 2987 2680 211 195 0 0 chr20 33138679 33138720 -39015162 + MIR SINE MIR 222 262 0 277 305 60 20 chr20 33139608 33139759 -39014123 + L2 LINE L2 2892 3048 -224 345 258 22 0 chr20 33139853 33139942 -39013940 - MER94 DNA DNA -42 92 2 2326 107 0 0 chr20 33140176 33140476 -39013406 + AluSx SINE Alu 1 300 -12 633 272 50 39 chr20 33140483 33140832 -39013050 - L2 LINE L2 -190 3123 2768 2090 102 0 46 chr20 33140832 33141136 -39012746 - AluSg SINE Alu -20 290 1 633 272 50 39 chr20 33141136 33141204 -39012678 - L2 LINE L2 -545 2768 2702 1948 111 52 17 chr20 33141791 33142079 -39011803 + AluJo SINE Alu 1 298 -14 827 123 0 0 chr20 33142085 33142199 -39011683 + FLAM_C SINE Alu 5 118 -15 201 159 0 0 chr20 33144606 33144650 -39009232 + CT-rich Low_complexity Low_complexity 1 44 0 29 84 0 0 chr20 33144887 33144958 -39008924 + GC_rich Low_complexity Low_complexity 1 71 0 389 286 66 98 chr20 33146609 33147018 -39006864 + MLT1K LTR MaLR 191 586 -2 238 227 27 13 chr20 33152460 33152535 -39001347 + L1ME LINE L1 5729 5804 -360 700 281 89 31 chr20 33152544 33152904 -39000978 + L1MC4a LINE L1 5644 6024 -1784 1772 185 14 0 chr20 33153079 33153371 -39000511 + AluJo SINE Alu 3 298 -14 475 266 101 6 chr20 33154066 33154235 -38999647 - MIR3 SINE MIR -17 191 7 1887 162 10 19 chr20 33154271 33154579 -38999303 + AluJo SINE Alu 1 305 -7 459 303 31 37 chr20 33154760 33154922 -38998960 + L2 LINE L2 3153 3313 0 2343 42 46 7 chr20 33154961 33155244 -38998638 - AluY SINE Alu -17 294 1 2160 121 7 10 chr20 33155314 33155612 -38998270 - AluSx SINE Alu -15 297 1 233 303 118 0 chr20 33155841 33155917 -38997965 + MIR3 SINE MIR 81 165 -43 1582 191 15 4 chr20 33156021 33156294 -38997588 + AluJo SINE Alu 1 276 -36 210 37 0 0 chr20 33156303 33156330 -38997552 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 280 146 0 21 chr20 33156383 33156431 -38997451 + Alu SINE Alu 1 47 -252 825 278 43 0 chr20 33157052 33157286 -38996596 + MIR SINE MIR 19 262 0 524 224 81 23 chr20 33159717 33159891 -38993991 + MIR SINE MIR 67 250 -12 425 254 90 8 chr20 33160372 33160506 -38993376 + MIR SINE MIR 117 261 -1 216 0 0 0 chr20 33160852 33160876 -38993006 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 35 0 0 chr20 33162544 33162573 -38991309 + GC_rich Low_complexity Low_complexity 1 29 0 360 263 11 0 chr20 33162930 33163025 -38990857 - MIR3 SINE MIR -25 183 88 226 234 78 0 chr20 33163043 33163107 -38990775 - L3 LINE CR1 -1202 375 307 * 665 228 21 99 chr20 33163105 33163253 -38990629 - L2 LINE L2 -1 3312 3187 1615 143 9 78 chr20 33163253 33163574 -38990308 + AluJo SINE Alu 1 299 -13 665 228 21 99 chr20 33163574 33163658 -38990224 - L2 LINE L2 -126 3187 3098 1068 268 99 15 chr20 33163746 33164235 -38989647 + L2 LINE L2 2776 3312 -1 528 270 0 22 chr20 33165117 33165254 -38988628 - MIR SINE MIR -113 149 16 193 195 134 61 chr20 33165315 33165397 -38988485 - MIR SINE MIR -99 163 76 195 191 214 24 chr20 33165490 33165574 -38988308 + L2 LINE L2 3214 3313 0 489 291 64 18 chr20 33165678 33165898 -38987984 + MIR SINE MIR 2 231 -31 2356 90 7 0 chr20 33165998 33166288 -38987594 - AluSc SINE Alu -17 292 1 358 293 149 5 chr20 33166369 33166584 -38987298 + L2 LINE L2 1787 2032 -1282 534 278 98 0 chr20 33166694 33166867 -38987015 + MIR SINE MIR 73 262 0 1828 164 27 0 chr20 33166988 33167280 -38986602 - AluJo SINE Alu -8 304 5 1867 183 3 3 chr20 33167288 33167600 -38986282 - AluSx SINE Alu 0 312 1 2199 130 0 3 chr20 33167604 33167904 -38985978 - AluSq SINE Alu -14 299 1 1954 97 23 0 chr20 33167946 33168204 -38985678 + AluSx SINE Alu 49 312 0 2372 82 3 3 chr20 33168209 33168503 -38985379 + AluSg SINE Alu 1 294 -16 561 302 77 60 chr20 33168792 33168851 -38985031 - L1ME LINE L1 -451 5670 5613 1990 164 0 0 chr20 33168851 33169143 -38984739 - AluJo SINE Alu -20 292 1 561 302 77 60 chr20 33169143 33169478 -38984404 - L1ME LINE L1 -508 5613 5271 2208 100 3 20 chr20 33169607 33169907 -38983975 - AluSx SINE Alu -17 295 1 305 321 61 66 chr20 33170238 33170474 -38983408 + MIR SINE MIR 2 236 -26 * 1049 232 8 24 chr20 33170472 33170722 -38983160 - MIR SINE MIR 0 262 17 531 299 40 0 chr20 33170850 33171027 -38982855 + MIR3 SINE MIR 2 185 -23 718 228 0 0 chr20 33172200 33172345 -38981537 + FRAM SINE Alu 17 161 -15 472 252 22 15 chr20 33172455 33172590 -38981292 - MIR SINE MIR -57 205 70 776 290 36 0 chr20 33172624 33172848 -38981034 - MIR SINE MIR 0 262 31 1759 175 7 7 chr20 33172866 33173157 -38980725 - AluJo SINE Alu -21 291 1 506 301 43 60 chr20 33173208 33173510 -38980372 + MARNA DNA Mariner 135 431 -155 466 251 222 97 chr20 33173752 33174166 -38979716 - L2 LINE L2 -5 3308 2843 348 197 74 66 chr20 33174174 33174227 -38979655 - MLT1H LTR MaLR -8 541 490 2392 45 45 3 chr20 33174227 33174515 -38979367 - AluY SINE Alu -11 300 1 348 197 74 66 chr20 33174515 33174583 -38979299 - MLT1H LTR MaLR -59 490 419 1035 142 23 73 chr20 33174688 33174948 -38978934 - L1MB4 LINE L1 -194 5986 5740 239 232 43 0 chr20 33174948 33175017 -38978865 - MLT1G3 LTR MaLR -109 433 362 662 176 8 40 chr20 33175019 33175144 -38978738 - FLAM_C SINE Alu -18 125 5 2144 129 7 3 chr20 33175178 33175473 -38978409 + AluSx SINE Alu 1 296 -16 525 278 74 14 chr20 33175508 33175792 -38978090 - MLT1G3 LTR MaLR -236 326 52 339 231 176 0 chr20 33176000 33176108 -38977774 + MIR3 SINE MIR 36 162 -46 1621 172 10 20 chr20 33176148 33176444 -38977438 + AluJo SINE Alu 2 294 -18 1202 229 70 38 chr20 33176593 33176734 -38977148 - MLT1J LTR MaLR -7 504 369 2177 121 0 16 chr20 33176734 33177039 -38976843 + AluSx SINE Alu 1 300 -12 1202 229 70 38 chr20 33177039 33177294 -38976588 - MLT1J LTR MaLR -142 369 95 262 246 202 35 chr20 33178432 33178546 -38975336 - L2 LINE L2 -2 3270 3138 1228 224 21 0 chr20 33178547 33178788 -38975094 + MIR SINE MIR 3 248 -14 2428 93 0 0 chr20 33178828 33179130 -38974752 + AluSx SINE Alu 1 302 -10 276 302 39 28 chr20 33179461 33179640 -38974242 + L1ME LINE L1 5695 5875 -295 353 242 21 11 chr20 33179704 33179799 -38974083 - MIR SINE MIR -1 261 166 416 207 43 78 chr20 33179800 33179896 -38973986 + L1MA9 LINE L1 6179 6277 -14 2371 100 7 0 chr20 33179896 33180205 -38973677 - AluY SINE Alu 0 311 1 1758 167 7 17 chr20 33180208 33180507 -38973375 - AluJb SINE Alu -16 296 1 416 207 43 78 chr20 33180507 33180522 -38973360 + L1MA9 LINE L1 6279 6290 -1 465 272 116 0 chr20 33180540 33180687 -38973195 - MIR SINE MIR -86 176 13 212 0 36 0 chr20 33180821 33180849 -38973033 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr20 33180897 33180920 -38972962 + AT_rich Low_complexity Low_complexity 1 23 0 3289 179 79 14 chr20 33180955 33181154 -38972728 - L1MD2 LINE L1 -3 6356 6171 267 114 0 0 chr20 33181154 33181198 -38972684 + (TG)n Simple_repeat Simple_repeat 2 45 0 3289 179 79 14 chr20 33181198 33181760 -38972122 - L1MD2 LINE L1 -188 6171 5546 188 260 14 96 chr20 33181933 33181955 -38971927 - L2 LINE L2 0 3272 3250 1847 139 9 47 chr20 33181955 33182272 -38971610 + AluJb SINE Alu 1 305 -7 188 260 14 96 chr20 33182272 33182322 -38971560 - L2 LINE L2 -22 3250 3206 313 195 230 35 chr20 33182442 33182529 -38971353 + L2 LINE L2 3169 3272 0 273 213 88 110 chr20 33183380 33183516 -38970366 - MIR SINE MIR -107 155 23 870 318 97 8 chr20 33183930 33184417 -38969465 + L1 LINE L1 3634 4163 -1983 1813 167 0 23 chr20 33184497 33184796 -38969086 - AluJb SINE Alu -20 292 1 2516 70 0 0 chr20 33184824 33185123 -38968759 + AluY SINE Alu 1 299 -12 2365 101 0 0 chr20 33185131 33185429 -38968453 + AluSx SINE Alu 1 298 -14 316 158 105 0 chr20 33186196 33186253 -38967629 + L2 LINE L2 3245 3307 -6 852 231 156 0 chr20 33186284 33186509 -38967373 + MIR SINE MIR 2 261 -1 667 111 102 19 chr20 33186914 33187022 -38966860 + FLAM_C SINE Alu 2 118 -25 222 37 0 0 chr20 33187026 33187053 -38966829 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 442 246 39 46 chr20 33187065 33187195 -38966687 - MIR3 SINE MIR -5 203 75 412 344 58 51 chr20 33187763 33188504 -38965378 - L2 LINE L2 -1 3271 2463 1257 204 5 5 chr20 33188619 33188839 -38965043 + AluJb SINE Alu 1 220 -92 228 250 88 15 chr20 33188918 33188986 -38964896 - L2 LINE L2 -301 2971 2899 907 170 0 0 chr20 33191060 33191201 -38962681 - AluJb SINE Alu -16 296 156 249 273 154 9 chr20 33191287 33191397 -38962485 + MIR SINE MIR 79 204 -58 423 309 92 46 chr20 33191486 33191703 -38962179 - MIR SINE MIR -34 228 2 1092 235 121 72 chr20 33191901 33192624 -38961258 - L2 LINE L2 -2 3311 2533 481 249 130 132 chr20 33192627 33192829 -38961053 - L1ME4a LINE L1 -136 5985 5783 2131 101 10 34 chr20 33192829 33193126 -38960756 + AluSx SINE Alu 1 290 -22 481 249 130 132 chr20 33193126 33193293 -38960589 - L1ME4a LINE L1 -338 5783 5617 477 256 80 0 chr20 33193449 33193574 -38960308 - L2 LINE L2 -772 2542 2408 186 186 153 17 chr20 33193563 33193622 -38960260 + MIR SINE MIR 69 135 -73 * 480 213 90 19 chr20 33193649 33193804 -38960078 + MER5A DNA MER1_type 1 166 -23 684 203 123 12 chr20 33193819 33193982 -38959900 + MER5A DNA MER1_type 9 189 0 1947 152 3 13 chr20 33194236 33194539 -38959343 + AluJo SINE Alu 3 302 -10 204 338 15 0 chr20 33194681 33194749 -38959133 + GA-rich Low_complexity Low_complexity 1 69 0 593 241 111 41 chr20 33195366 33195555 -38958327 - MER113 DNA MER1_type? -108 413 191 1776 149 22 0 chr20 33195555 33195860 -38958022 - AluJb SINE Alu 0 311 1 593 241 111 41 chr20 33195860 33195984 -38957898 - MER113 DNA MER1_type? -330 191 77 1773 136 27 37 chr20 33196225 33196519 -38957363 + AluJo SINE Alu 1 291 -21 781 300 29 4 chr20 33196532 33196772 -38957110 - MIR SINE MIR -3 259 14 268 347 66 16 chr20 33196815 33196936 -38956946 + L2 LINE L2 3127 3253 -19 2333 83 10 13 chr20 33196940 33197076 -38956806 + AluSx SINE Alu 1 136 -176 2487 84 3 3 chr20 33197076 33197387 -38956495 + AluSp SINE Alu 1 311 -2 2333 83 10 13 chr20 33197387 33197551 -38956331 + AluSx SINE Alu 136 300 -12 216 0 0 0 chr20 33197553 33197577 -38956305 + (TA)n Simple_repeat Simple_repeat 2 25 0 973 129 0 0 chr20 33198214 33198346 -38955536 + AluSq/x SINE Alu 1 132 -180 407 297 62 55 chr20 33198383 33198520 -38955362 + MIR SINE MIR 5 146 -116 1672 186 0 17 chr20 33198520 33198816 -38955066 + AluJb SINE Alu 1 291 -21 407 297 62 55 chr20 33198816 33198934 -38954948 + MIR SINE MIR 146 262 0 209 151 0 0 chr20 33199523 33199563 -38954319 + MIR SINE MIR 115 153 -109 200 268 31 82 chr20 33199550 33199647 -38954235 - L2 LINE L2 -62 3251 3160 * 810 153 12 112 chr20 33199667 33199837 -38954045 + AluJb SINE Alu 14 166 -146 1036 185 0 6 chr20 33199845 33200023 -38953859 + AluJb SINE Alu 128 304 -8 2366 122 0 0 chr20 33200062 33200374 -38953508 - AluSx SINE Alu 0 312 1 2284 123 3 0 chr20 33200410 33200720 -38953162 + AluSx SINE Alu 1 311 -1 2312 97 3 7 chr20 33200722 33201022 -38952860 + AluSc SINE Alu 1 299 -10 956 172 32 0 chr20 33201022 33201179 -38952703 + AluJb SINE Alu 134 295 -17 736 230 143 0 chr20 33201179 33201375 -38952507 - L2 LINE L2 -162 3151 2928 748 122 0 46 chr20 33201491 33201622 -38952260 - AluSg/x SINE Alu 0 310 186 1644 202 4 0 chr20 33201626 33201898 -38951984 - AluJb SINE Alu -39 273 1 261 75 0 0 chr20 33201903 33201943 -38951939 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2269 70 4 4 chr20 33201944 33202217 -38951665 - AluSp SINE Alu -32 281 9 392 96 41 27 chr20 33202217 33202290 -38951592 - L2 LINE L2 -533 2781 2708 2352 84 0 3 chr20 33202292 33202591 -38951291 - AluY SINE Alu -13 298 1 2120 189 114 18 chr20 33202605 33202972 -38950910 - MLT1F LTR MaLR 0 542 211 1535 146 12 103 chr20 33202972 33203131 -38950751 - AluJb SINE Alu -20 292 120 2150 116 0 3 chr20 33203131 33203424 -38950458 - AluSc SINE Alu -17 292 1 1535 146 12 103 chr20 33203424 33203460 -38950422 - AluJb SINE Alu -192 120 82 2414 95 0 3 chr20 33203460 33203764 -38950118 + AluSx SINE Alu 1 303 -9 1535 146 12 103 chr20 33203764 33203888 -38949994 - AluJb SINE Alu -230 82 1 2120 189 114 18 chr20 33203888 33204013 -38949869 - MLT1F LTR MaLR -331 211 3 1501 206 45 64 chr20 33204017 33204252 -38949630 - L1ME1 LINE L1 -2 6164 5941 2267 113 3 0 chr20 33204252 33204553 -38949329 - AluSq SINE Alu -11 302 1 1501 206 45 64 chr20 33204553 33204789 -38949093 - L1ME1 LINE L1 -225 5941 5702 431 213 0 0 chr20 33204789 33204869 -38949013 - MLT1A1 LTR MaLR 0 365 286 2408 52 31 0 chr20 33204870 33205156 -38948726 - AluY SINE Alu -12 299 5 1931 123 39 3 chr20 33205185 33205470 -38948412 - AluSq SINE Alu -18 295 1 2326 112 0 31 chr20 33205483 33205804 -38948078 - AluSx SINE Alu 0 312 2 791 104 18 67 chr20 33205804 33205962 -38947920 - L1MB3 LINE L1 -40 6143 5994 1474 183 20 4 chr20 33205966 33206262 -38947620 - AluJo SINE Alu 0 330 31 259 298 21 0 chr20 33206287 33206381 -38947501 - L1ME LINE L1 -5927 143 48 258 318 12 0 chr20 33206389 33206474 -38947408 - L2 LINE L2 -608 2706 2621 211 343 46 19 chr20 33206465 33206573 -38947309 - L2 LINE L2 -213 3059 2949 * 2251 101 0 44 chr20 33206590 33206908 -38946974 - AluSx SINE Alu -8 304 1 1915 169 0 16 chr20 33207503 33207816 -38946066 - AluJb SINE Alu -4 308 1 2627 188 27 40 chr20 33207890 33208438 -38945444 - MLT1F LTR MaLR -1 541 1 2086 122 48 0 chr20 33208638 33208933 -38944949 + AluSq SINE Alu 1 309 -4 2280 109 0 0 chr20 33209002 33209306 -38944576 + AluY SINE Alu 1 304 -7 1934 166 14 0 chr20 33209317 33209612 -38944270 - AluJb SINE Alu -13 299 1 2244 101 7 0 chr20 33209621 33209908 -38943974 - AluSx SINE Alu -19 293 5 2192 210 107 20 chr20 33209986 33210529 -38943353 - MLT1G LTR MaLR 0 590 1 868 140 0 56 chr20 33210540 33210683 -38943199 - AluJo SINE Alu -177 135 1 2236 117 0 0 chr20 33210706 33210996 -38942886 + AluSx SINE Alu 1 290 -22 456 307 43 12 chr20 33211444 33211607 -38942275 - L3 LINE CR1 -14 1563 1396 2489 95 0 13 chr20 33211644 33211960 -38941922 + AluSx SINE Alu 1 312 0 762 249 30 63 chr20 33211962 33212180 -38941702 - MER102b DNA MER1_type -1100 328 104 1819 161 39 0 chr20 33212180 33212460 -38941422 - AluJb SINE Alu -20 292 2 762 249 30 63 chr20 33212460 33212489 -38941393 - MER102b DNA MER1_type -1324 104 76 2199 129 0 0 chr20 33212489 33212791 -38941091 - AluSg SINE Alu -8 302 1 762 249 30 63 chr20 33212791 33212875 -38941007 - MER102b DNA MER1_type -1352 76 7 381 252 205 16 chr20 33212882 33213009 -38940873 + MIR SINE MIR 14 164 -98 1123 161 101 35 chr20 33213052 33213251 -38940631 - AluJo SINE Alu -83 229 18 1412 160 0 0 chr20 33213251 33213463 -38940419 + AluSg/x SINE Alu 86 297 -13 1842 154 7 17 chr20 33213501 33213785 -38940097 + AluJo SINE Alu 1 283 -29 261 0 0 0 chr20 33213785 33213814 -38940068 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 1842 154 7 17 chr20 33213814 33213828 -38940054 + AluJo SINE Alu 283 296 -16 2306 106 7 0 chr20 33213889 33214181 -38939701 - AluSx SINE Alu -17 295 2 2232 83 17 3 chr20 33214188 33214478 -38939404 - AluSg SINE Alu -16 294 1 2165 88 42 32 chr20 33214535 33214719 -38939163 - AluSx SINE Alu -1 311 121 2313 102 0 19 chr20 33214719 33215032 -38938850 - AluSg SINE Alu -3 307 1 2165 88 42 32 chr20 33215032 33215155 -38938727 - AluSx SINE Alu -191 121 1 486 204 215 29 chr20 33215809 33215918 -38937964 + MIR SINE MIR 48 135 -127 2358 77 3 0 chr20 33215918 33216264 -38937618 + AluSq SINE Alu 1 347 0 486 204 215 29 chr20 33216264 33216325 -38937557 + MIR SINE MIR 135 251 -11 1895 168 0 3 chr20 33216656 33216954 -38936928 + AluJb SINE Alu 5 301 -11 292 234 2 0 chr20 33217195 33217260 -38936622 - MIR SINE MIR -68 140 84 2278 129 0 0 chr20 33217616 33217926 -38935956 + AluSx SINE Alu 1 310 -2 318 298 49 24 chr20 33217944 33218149 -38935733 - L1ME4a LINE L1 -2 6119 5910 828 236 112 83 chr20 33218170 33218237 -38935645 + MLT1L LTR MaLR 1 65 -550 1885 162 7 0 chr20 33218237 33218527 -38935355 - AluJo SINE Alu -19 293 2 828 236 112 83 chr20 33218527 33218660 -38935222 + MLT1L LTR MaLR 65 193 -422 1029 175 0 87 chr20 33218660 33218794 -38935088 - MER3 DNA MER1_type 0 209 102 2293 117 7 0 chr20 33218794 33219103 -38934779 + AluSq SINE Alu 1 311 -2 1029 175 0 87 chr20 33219103 33219197 -38934685 - MER3 DNA MER1_type -107 102 1 828 236 112 83 chr20 33219197 33219431 -38934451 + MLT1L LTR MaLR 193 449 -166 2274 119 6 3 chr20 33219442 33219753 -38934129 - AluSq SINE Alu -1 312 1 1781 134 72 14 chr20 33219779 33220069 -38933813 + AluJb SINE Alu 1 307 -5 4183 150 49 46 chr20 33220069 33220344 -38933538 - L1MB3 LINE L1 -9 6174 5901 381 43 0 0 chr20 33220354 33220401 -38933481 + (TA)n Simple_repeat Simple_repeat 2 48 0 2331 110 0 0 chr20 33220401 33220698 -38933184 - AluSg SINE Alu -10 300 1 2291 109 0 0 chr20 33220698 33220990 -38932892 - AluSx SINE Alu -19 293 1 4183 150 49 46 chr20 33220990 33221485 -38932397 - L1MB3 LINE L1 -282 5901 5409 2259 107 3 0 chr20 33221485 33221785 -38932097 - AluSq SINE Alu -12 301 1 4183 150 49 46 chr20 33221785 33221844 -38932038 - L1MB3 LINE L1 -774 5409 5352 1234 199 123 25 chr20 33221844 33222120 -38931762 - AluJb SINE Alu -9 303 1 4183 150 49 46 chr20 33222120 33222172 -38931710 - L1MB3 LINE L1 -831 5352 5302 1859 112 79 4 chr20 33222172 33222449 -38931433 - AluSq SINE Alu -15 298 1 4183 150 49 46 chr20 33222449 33222546 -38931336 - L1MB3 LINE L1 -881 5302 5182 417 39 0 0 chr20 33222679 33222730 -38931152 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 189 107 0 0 chr20 33222728 33222756 -38931126 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 2303 120 0 0 chr20 33222756 33223065 -38930817 - AluSc SINE Alu 0 309 1 451 292 92 5 chr20 33223067 33223262 -38930620 - L1ME4a LINE L1 -293 5828 5617 2496 72 0 3 chr20 33223281 33223588 -38930294 - AluY SINE Alu -5 306 1 1944 162 3 7 chr20 33223676 33223984 -38929898 - AluJo SINE Alu -5 307 1 1549 190 3 13 chr20 33224041 33224202 -38929680 - AluJo SINE Alu -12 300 142 2195 106 0 3 chr20 33224202 33224503 -38929379 - AluY SINE Alu -11 300 1 1549 190 3 13 chr20 33224503 33224641 -38929241 - AluJo SINE Alu -170 142 4 197 303 30 15 chr20 33224670 33224736 -38929146 - L2 LINE L2 -30 3242 3176 2048 105 0 38 chr20 33224819 33225132 -38928750 + AluSx SINE Alu 1 301 -11 317 218 99 35 chr20 33225185 33225338 -38928544 - MIR SINE MIR -50 212 38 607 289 47 30 chr20 33225727 33225775 -38928107 - MIR SINE MIR -4 258 212 1823 162 30 0 chr20 33225775 33226078 -38927804 - AluJb SINE Alu 0 312 1 607 289 47 30 chr20 33226078 33226261 -38927621 - MIR SINE MIR -50 212 23 1256 161 15 0 chr20 33226283 33226488 -38927394 - MER3 DNA MER1_type -1 208 1 369 269 19 113 chr20 33226990 33227150 -38926732 + LTR67 LTR ERVL 26 170 -387 187 185 0 185 chr20 33227177 33227296 -38926586 - L2 LINE L2 -2786 528 432 311 207 49 12 chr20 33227340 33227422 -38926460 + LTR67 LTR ERVL 448 532 -25 636 212 9 0 chr20 33227871 33227984 -38925898 + MER81 DNA DNA 1 114 0 2022 120 0 17 chr20 33228099 33228399 -38925483 + AluSx SINE Alu 1 295 -17 362 189 8 71 chr20 33228399 33228526 -38925356 - L1MC/D LINE L1 -2376 5432 5314 1133 94 33 0 chr20 33228536 33228717 -38925165 - L1MA4A LINE L1 -16 6287 6101 400 256 55 75 chr20 33228726 33228925 -38924957 + HAL1 LINE L1 2 196 -2311 2101 227 75 81 chr20 33228996 33229183 -38924699 + HAL1 LINE L1 1100 1287 -1220 1545 166 55 0 chr20 33229183 33229454 -38924428 + AluJo SINE Alu 11 296 -16 2101 227 75 81 chr20 33229454 33229763 -38924119 + HAL1 LINE L1 1287 1596 -911 2097 113 0 19 chr20 33229763 33230073 -38923809 - AluSx SINE Alu -8 304 1 2101 227 75 81 chr20 33230073 33230397 -38923485 + HAL1 LINE L1 1596 1917 -590 1960 139 0 13 chr20 33230397 33230714 -38923168 - AluSq SINE Alu 0 313 1 2101 227 75 81 chr20 33230714 33230865 -38923017 + HAL1 LINE L1 1917 2067 -440 24 0 0 0 chr20 33230895 33230919 -38922963 + AT_rich Low_complexity Low_complexity 1 24 0 653 223 130 16 chr20 33230931 33231115 -38922767 - MLT1J2 LTR MaLR -245 205 1 394 239 54 54 chr20 33231161 33231291 -38922591 - L2 LINE L2 0 3313 3184 368 241 78 129 chr20 33231380 33231457 -38922425 - L2 LINE L2 -527 2787 2708 279 0 0 0 chr20 33231457 33231488 -38922394 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 368 241 78 129 chr20 33231488 33231501 -38922381 - L2 LINE L2 -606 2708 2696 2077 71 7 7 chr20 33231501 33231784 -38922098 - AluSx SINE Alu -29 283 1 368 241 78 129 chr20 33231784 33231924 -38921958 - L2 LINE L2 -618 2696 2568 183 0 71 0 chr20 33232109 33232137 -38921745 - MIR SINE MIR -123 139 110 381 22 0 0 chr20 33232417 33232463 -38921419 + (CCG)n Simple_repeat Simple_repeat 2 47 0 383 281 85 12 chr20 33232765 33232929 -38920953 + MIR SINE MIR 35 210 -52 472 239 223 0 chr20 33232977 33233161 -38920721 + MIR SINE MIR 20 244 -18 376 251 0 45 chr20 33233505 33233635 -38920247 - MIR SINE MIR -50 212 91 2114 113 3 0 chr20 33233640 33233941 -38919941 - AluSx SINE Alu -10 302 1 2249 81 7 0 chr20 33234186 33234482 -38919400 - AluSp SINE Alu -15 298 1 295 263 25 0 chr20 33234508 33234588 -38919294 + MIR3 SINE MIR 109 190 -18 387 235 69 64 chr20 33234594 33234730 -38919152 + MIR SINE MIR 14 156 -52 392 167 0 160 chr20 33234766 33234910 -38918972 + MIR SINE MIR 98 218 -44 2403 68 0 3 chr20 33235153 33235463 -38918419 + AluY SINE Alu 3 311 0 272 311 95 37 chr20 33235877 33236067 -38917815 - MIR SINE MIR -54 208 8 444 272 75 23 chr20 33236078 33236251 -38917631 - L2 LINE L2 -4 3309 3128 1401 130 0 14 chr20 33236253 33236468 -38917414 + AluSg/x SINE Alu 99 310 0 1404 263 79 46 chr20 33236469 33237140 -38916742 - L2 LINE L2 -261 3052 2345 29 0 0 0 chr20 33237736 33237765 -38916117 + AT_rich Low_complexity Low_complexity 1 29 0 1168 172 39 77 chr20 33237767 33237942 -38915940 - AluJo SINE Alu -25 287 107 2331 78 0 0 chr20 33237942 33238236 -38915646 + AluSg SINE Alu 1 294 -16 2075 133 0 0 chr20 33238246 33238540 -38915342 + AluSx SINE Alu 1 294 -18 1168 172 39 77 chr20 33238540 33238638 -38915244 - AluJo SINE Alu -214 98 14 1669 140 6 80 chr20 33238643 33238957 -38914925 - AluJo SINE Alu -21 291 1 227 299 37 47 chr20 33238992 33239099 -38914783 - MIR SINE MIR -52 210 105 254 246 152 105 chr20 33239154 33239225 -38914657 + MER5A DNA MER1_type 4 70 -119 771 166 0 43 chr20 33239225 33239364 -38914518 + FLAM_C SINE Alu 1 133 0 254 246 152 105 chr20 33239364 33239463 -38914419 + MER5A DNA MER1_type 70 182 -7 405 200 150 58 chr20 33239549 33239669 -38914213 - MIR SINE MIR -35 227 97 409 235 72 78 chr20 33240270 33240436 -38913446 + MIR3 SINE MIR 22 186 -22 339 230 71 8 chr20 33241293 33241419 -38912463 - L1ME4a LINE L1 -2 6119 5986 286 276 8 90 chr20 33241479 33241613 -38912269 - L1ME4a LINE L1 -359 5762 5640 891 140 0 0 chr20 33241894 33242030 -38911852 - FLAM_C SINE Alu -3 140 5 1634 195 3 0 chr20 33242036 33242334 -38911548 - AluJo SINE Alu -8 304 6 2305 97 0 0 chr20 33242591 33242899 -38910983 - AluSg SINE Alu -2 308 1 1661 163 24 17 chr20 33242925 33243220 -38910662 + AluJo SINE Alu 1 297 -15 328 69 414 0 chr20 33243440 33243498 -38910384 - AluSc SINE Alu -25 274 193 1510 218 63 32 chr20 33243765 33243916 -38909966 - MER113 DNA MER1_type? -27 494 349 2117 105 14 0 chr20 33243916 33244210 -38909672 - AluSg1 SINE Alu -11 298 1 1510 218 63 32 chr20 33244210 33244499 -38909383 - MER113 DNA MER1_type? -172 349 40 315 235 92 42 chr20 33244547 33244666 -38909216 + MIR SINE MIR 20 144 -118 421 267 24 79 chr20 33244712 33244831 -38909051 - MIR SINE MIR -71 191 82 1857 105 52 3 chr20 33244831 33245117 -38908765 + AluSx SINE Alu 1 300 -12 421 267 24 79 chr20 33245117 33245162 -38908720 - MIR SINE MIR -180 82 36 2617 119 36 43 chr20 33245227 33245307 -38908575 + L1MB2 LINE L1 5706 5785 -386 1892 140 7 26 chr20 33245307 33245614 -38908268 + AluJo SINE Alu 1 301 -11 2617 119 36 43 chr20 33245614 33246002 -38907880 + L1MB2 LINE L1 5785 6171 0 586 221 118 79 chr20 33246034 33246336 -38907546 - L1MC5 LINE L1 -32 7929 7640 2198 104 0 3 chr20 33246336 33246635 -38907247 - AluSx SINE Alu -14 298 1 1574 152 0 81 chr20 33246638 33246948 -38906934 - AluJo SINE Alu -17 295 11 586 221 118 79 chr20 33246948 33247007 -38906875 - L1MC5 LINE L1 -322 7639 7550 587 164 0 49 chr20 33247053 33247175 -38906707 + AluJo SINE Alu 22 137 -175 1545 145 3 71 chr20 33247176 33247486 -38906396 + AluJb SINE Alu 3 291 -21 385 305 26 13 chr20 33247530 33247681 -38906201 + L1MC/D LINE L1 5621 5773 -2035 1742 162 16 7 chr20 33247691 33247970 -38905912 + AluSx SINE Alu 1 285 -27 228 67 0 0 chr20 33247970 33248000 -38905882 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1742 162 16 7 chr20 33248000 33248029 -38905853 + AluSx SINE Alu 285 312 0 1360 182 19 56 chr20 33248034 33248358 -38905524 + AluJb SINE Alu 1 312 0 513 322 49 5 chr20 33248596 33248801 -38905081 + MIR SINE MIR 8 221 -41 588 305 64 26 chr20 33249258 33249491 -38904391 - MIR SINE MIR -4 258 17 673 279 71 20 chr20 33249557 33249908 -38903974 - L1MC4a LINE L1 -1893 5915 5547 2324 71 0 3 chr20 33250014 33250311 -38903571 - AluY SINE Alu -15 296 1 2169 101 0 13 chr20 33250573 33250881 -38903001 - AluSc SINE Alu -5 304 1 300 258 23 91 chr20 33250988 33251073 -38902809 - L1MC4a LINE L1 -1619 6189 6115 1644 129 19 0 chr20 33251073 33251329 -38902553 + AluSx SINE Alu 35 295 -17 300 258 23 91 chr20 33251329 33251375 -38902507 - L1MC4a LINE L1 -1693 6115 6067 337 271 132 14 chr20 33252057 33252201 -38901681 - L1ME4a LINE L1 -2 6119 5959 238 329 0 0 chr20 33252354 33252424 -38901458 - Charlie8 DNA MER1_type -4 2413 2344 2063 101 14 10 chr20 33252544 33252841 -38901041 + AluSp SINE Alu 1 298 -15 1597 163 30 3 chr20 33252874 33253169 -38900713 + AluSx SINE Alu 1 303 -9 261 83 0 0 chr20 33253374 33253410 -38900472 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 1163 210 90 22 chr20 33253410 33253677 -38900205 - AluJo SINE Alu -13 289 5 930 229 22 18 chr20 33253829 33254052 -38899830 - MER58A DNA MER1_type 0 224 1 225 0 0 0 chr20 33254098 33254123 -38899759 + (TA)n Simple_repeat Simple_repeat 1 25 0 1913 137 3 7 chr20 33254123 33254430 -38899452 - AluSx SINE Alu -6 306 1 367 228 10 134 chr20 33254436 33254506 -38899376 - L1ME4a LINE L1 -364 5798 5721 1505 177 46 0 chr20 33254506 33254788 -38899094 - AluJo SINE Alu -11 301 7 405 0 0 0 chr20 33254793 33254838 -38899044 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 1429 152 7 79 chr20 33254840 33255004 -38898878 - AluJo SINE Alu -31 281 147 2003 90 7 14 chr20 33255004 33255294 -38898588 - AluY SINE Alu -20 291 4 1429 152 7 79 chr20 33255294 33255432 -38898450 - AluJo SINE Alu -165 147 1 367 228 10 134 chr20 33255432 33255554 -38898328 - L1ME4a LINE L1 -446 5716 5622 288 0 0 0 chr20 33255558 33255590 -38898292 + (TTG)n Simple_repeat Simple_repeat 2 33 0 911 175 18 6 chr20 33255625 33255796 -38898086 - AluJo SINE Alu -53 259 87 1944 97 90 0 chr20 33255804 33256083 -38897799 - AluSx SINE Alu -8 304 1 2000 123 3 0 chr20 33256088 33256395 -38897487 - AluSq SINE Alu 0 308 1 1264 73 141 29 chr20 33257626 33257832 -38896050 - MER30 DNA MER1_type -1 229 1 2049 107 7 0 chr20 33258005 33258294 -38895588 + AluSx SINE Alu 5 295 -17 2024 117 43 0 chr20 33258304 33258603 -38895279 + AluSq SINE Alu 1 312 -1 440 230 96 41 chr20 33259112 33259318 -38894564 + L1MC/D LINE L1 5583 5814 -307 261 0 0 0 chr20 33259514 33259543 -38894339 + (GA)n Simple_repeat Simple_repeat 2 30 0 2117 96 0 34 chr20 33259577 33259899 -38893983 + AluSx SINE Alu 1 311 -1 981 161 0 12 chr20 33259931 33260092 -38893790 + AluJb SINE Alu 134 292 -20 1928 103 32 32 chr20 33260289 33260600 -38893282 - AluSx SINE Alu -1 311 1 1151 117 0 0 chr20 33260664 33260826 -38893056 + AluSq SINE Alu 143 304 -9 2143 95 0 10 chr20 33260832 33261127 -38892755 + AluSc SINE Alu 2 293 -16 2302 87 0 16 chr20 33261300 33261611 -38892271 - AluSc SINE Alu -3 306 1 1422 143 22 0 chr20 33261767 33261997 -38891885 - L1MC1 LINE L1 0 6333 6099 952 258 120 9 chr20 33262016 33262342 -38891540 - L1MC1 LINE L1 -1898 5910 5549 1841 103 46 0 chr20 33262405 33262667 -38891215 + AluY SINE Alu 38 311 0 1923 123 0 7 chr20 33262681 33262966 -38890916 + AluY SINE Alu 11 293 -18 1356 148 8 66 chr20 33262966 33263111 -38890771 - AluJo SINE Alu -36 276 124 1842 154 0 19 chr20 33263111 33263429 -38890453 - AluSx SINE Alu 0 312 1 2267 73 33 0 chr20 33263433 33263733 -38890149 - AluY SINE Alu -1 310 1 1478 198 0 51 chr20 33263738 33264051 -38889831 - AluJb SINE Alu -15 297 1 1356 148 8 66 chr20 33264051 33264151 -38889731 - AluJo SINE Alu -195 117 35 225 178 0 0 chr20 33265674 33265719 -38888163 + GA-rich Low_complexity Low_complexity 1 45 0 2589 7 0 7 chr20 33266154 33266449 -38887433 + AluYa5 SINE Alu 19 311 0 2246 98 0 0 chr20 33266515 33266821 -38887061 - AluSq SINE Alu -7 306 1 1799 139 40 7 chr20 33266821 33267123 -38886759 - AluJb SINE Alu 0 312 1 818 277 203 5 chr20 33267275 33267719 -38886163 - L1ME3A LINE L1 -232 5938 5407 298 195 13 39 chr20 33267720 33267797 -38886085 - L1ME1 LINE L1 -107 6059 5985 1725 155 7 7 chr20 33268420 33268722 -38885160 - AluJb SINE Alu 0 306 5 2241 101 0 0 chr20 33268976 33269274 -38884608 + AluSx SINE Alu 1 298 -14 273 149 43 0 chr20 33269320 33269367 -38884515 - MIR3 SINE MIR -48 160 112 318 303 181 39 chr20 33269461 33269970 -38883912 + L2 LINE L2 2193 2773 -541 1510 177 7 39 chr20 33270143 33270448 -38883434 + AluJo SINE Alu 1 295 -17 190 321 222 0 chr20 33270543 33270624 -38883258 + L2 LINE L2 3124 3222 -50 1973 119 31 3 chr20 33271672 33271966 -38881916 + AluSx SINE Alu 1 302 -10 252 261 120 0 chr20 33272025 33272117 -38881765 + MIR3 SINE MIR 91 193 -15 226 191 48 48 chr20 33272205 33272268 -38881614 - L1MC4 LINE L1 -42 8000 7938 1777 177 0 10 chr20 33272360 33272659 -38881223 - AluJo SINE Alu -16 296 1 4188 158 18 72 chr20 33272669 33272741 -38881141 - L1MB8 LINE L1 -1 6177 6103 2179 100 3 3 chr20 33272741 33273042 -38880840 + AluSx SINE Alu 3 303 -9 4188 158 18 72 chr20 33273042 33273678 -38880204 - L1MB8 LINE L1 -75 6103 5527 1818 163 7 0 chr20 33273678 33273979 -38879903 - AluJb SINE Alu -9 303 1 4188 158 18 72 chr20 33273979 33274192 -38879690 - L1MB8 LINE L1 -651 5527 5304 276 174 0 35 chr20 33274193 33274279 -38879603 + (TA)n Simple_repeat Simple_repeat 1 83 0 2283 120 0 0 chr20 33274292 33274604 -38879278 - AluSx SINE Alu -3 309 1 2269 107 0 0 chr20 33274623 33274913 -38878969 - AluSx SINE Alu -22 290 1 431 289 10 30 chr20 33274913 33275114 -38878768 - L1MB8 LINE L1 -857 5289 5093 285 122 22 133 chr20 33275106 33275196 -38878686 - L1MB5 LINE L1 -215 5959 5880 * 237 65 0 0 chr20 33275200 33275231 -38878651 + (TG)n Simple_repeat Simple_repeat 2 32 0 987 206 23 19 chr20 33275239 33275453 -38878429 - AluJo SINE Alu -14 298 84 1226 144 14 9 chr20 33275453 33275675 -38878207 - L1MB5 LINE L1 -314 5870 5648 * 1850 183 27 29 chr20 33275664 33275866 -38878016 - L1MB8 LINE L1 -1088 5058 4857 2352 100 3 0 chr20 33275866 33276165 -38877717 + AluSx SINE Alu 1 300 -12 1850 183 27 29 chr20 33276165 33276371 -38877511 - L1MB8 LINE L1 -1289 4857 4651 933 185 0 6 chr20 33276372 33276529 -38877353 + Tigger1 DNA MER2_type 1 156 -2262 * 1275 121 48 5 chr20 33276519 33276726 -38877156 + Tigger1 DNA MER2_type 2202 2417 -1 1423 196 28 3 chr20 33276727 33277044 -38876838 - L1MB8 LINE L1 -1495 4651 4327 2338 86 3 0 chr20 33277045 33277336 -38876546 + AluSx SINE Alu 1 292 -20 972 123 0 0 chr20 33277339 33277711 -38876171 + (TA)n Simple_repeat Simple_repeat 1 372 0 669 216 22 27 chr20 33277713 33277898 -38875984 - L1M4 LINE L1 -1025 5121 4938 873 147 3 3 chr20 33278004 33278303 -38875579 + (TA)n Simple_repeat Simple_repeat 1 300 0 1227 124 0 21 chr20 33278490 33278683 -38875199 - AluSc SINE Alu -3 306 118 2251 94 7 3 chr20 33278695 33278982 -38874900 + AluSq SINE Alu 1 288 -25 1129 157 0 0 chr20 33279059 33279231 -38874651 + FRAM SINE Alu 1 170 -6 483 144 122 0 chr20 33279335 33279425 -38874457 - MER5B DNA MER1_type -4 174 74 852 192 40 0 chr20 33279425 33279602 -38874280 - MER5A DNA MER1_type 0 189 6 265 286 13 0 chr20 33279604 33279681 -38874201 - MER5B DNA MER1_type -94 84 7 299 123 0 53 chr20 33279699 33279756 -38874126 - L1MC5 LINE L1 -737 7224 7171 1966 151 0 7 chr20 33279845 33280137 -38873745 + AluSx SINE Alu 1 290 -22 366 209 35 61 chr20 33280182 33280279 -38873603 + L1ME4a LINE L1 5954 6049 -72 2087 146 0 3 chr20 33280279 33280588 -38873294 - AluSx SINE Alu -4 308 1 366 209 35 61 chr20 33280588 33280605 -38873277 + L1ME4a LINE L1 6049 6065 -56 2278 119 7 0 chr20 33280754 33281064 -38872818 - AluSq SINE Alu -1 312 1 1871 176 0 3 chr20 33282915 33283227 -38870655 + AluJb SINE Alu 1 311 -1 2303 105 0 6 chr20 33283239 33283553 -38870329 + AluSx SINE Alu 1 312 0 1297 70 0 41 chr20 33283553 33283724 -38870158 + AluSg/x SINE Alu 131 294 -16 29 0 0 0 chr20 33283986 33284015 -38869867 + AT_rich Low_complexity Low_complexity 1 29 0 2049 138 0 0 chr20 33284015 33284305 -38869577 - AluSx SINE Alu -22 290 1 1146 52 8 0 chr20 33284305 33284439 -38869443 - AluSq/x SINE Alu -178 135 1 868 179 0 0 chr20 33284439 33284584 -38869298 - FRAM SINE Alu -4 172 28 181 282 0 0 chr20 33284597 33284636 -38869246 - L2 LINE L2 -24 3248 3210 243 273 78 7 chr20 33284769 33284923 -38868959 + L1ME4a LINE L1 5954 6118 -3 504 327 13 26 chr20 33285689 33285915 -38867967 - MIR SINE MIR -33 229 7 222 286 0 16 chr20 33286701 33286764 -38867118 + CT-rich Low_complexity Low_complexity 2 63 0 2330 117 0 0 chr20 33288448 33288756 -38865126 + AluSx SINE Alu 1 308 -4 1960 116 29 0 chr20 33290254 33290562 -38863320 + AluSx SINE Alu 1 316 0 1191 161 75 0 chr20 33290751 33290950 -38862932 - AluJb SINE Alu -17 295 82 531 306 68 15 chr20 33291094 33291337 -38862545 + MIR SINE MIR 8 259 -3 431 284 52 84 chr20 33291458 33291646 -38862236 - L2 LINE L2 -16 3297 3126 1738 165 10 20 chr20 33291646 33291943 -38861939 - AluJb SINE Alu -8 304 11 431 284 52 84 chr20 33291943 33292135 -38861747 - L2 LINE L2 -187 3126 2929 2347 87 3 26 chr20 33292509 33292821 -38861061 + AluSp SINE Alu 2 306 -7 193 291 36 0 chr20 33293319 33293374 -38860508 - L2 LINE L2 -13 3259 3203 462 269 18 58 chr20 33293469 33293692 -38860190 + L2 LINE L2 2837 3050 -222 1517 101 43 5 chr20 33293718 33293927 -38859955 - AluY SINE Alu -94 217 1 835 197 0 0 chr20 33293943 33294080 -38859802 + FRAM SINE Alu 1 132 -44 611 269 131 56 chr20 33294892 33295243 -38858639 - L2 LINE L2 0 3313 2923 2341 111 0 0 chr20 33295243 33295541 -38858341 + AluSx SINE Alu 1 298 -14 611 269 131 56 chr20 33295541 33295616 -38858266 - L2 LINE L2 -390 2923 2855 376 221 113 155 chr20 33295653 33295988 -38857894 - L2 LINE L2 -562 2752 2432 2199 91 0 0 chr20 33296012 33296275 -38857607 - AluSg SINE Alu -47 263 1 692 146 42 130 chr20 33296318 33296337 -38857545 - L1MB8 LINE L1 -7 6171 6152 2235 148 9 0 chr20 33296337 33296682 -38857200 - MER7A DNA MER2_type 0 346 1 692 146 42 130 chr20 33296682 33296782 -38857100 - L1MB8 LINE L1 -26 6152 6045 2289 103 3 0 chr20 33296782 33297082 -38856800 - AluSx SINE Alu -11 301 1 692 146 42 130 chr20 33297082 33297109 -38856773 - L1MB8 LINE L1 -133 6045 6017 2101 139 0 3 chr20 33297109 33297410 -38856472 + AluSx SINE Alu 1 300 -12 692 146 42 130 chr20 33297410 33297500 -38856382 - L1MB8 LINE L1 -161 6017 5954 280 313 15 37 chr20 33297718 33297852 -38856030 + MIR SINE MIR 14 144 -118 649 156 9 9 chr20 33297865 33297974 -38855908 - Tigger3(Golem) DNA MER2_type 0 3037 2929 274 50 0 0 chr20 33298003 33298043 -38855839 - AluJo SINE Alu -1 301 262 974 146 0 13 chr20 33298044 33298202 -38855680 - AluJo SINE Alu -102 210 55 1741 164 49 23 chr20 33298324 33298628 -38855254 - AluJo SINE Alu 0 312 1 479 171 40 0 chr20 33298644 33298720 -38855162 - Tigger3(Golem) DNA MER2_type -2949 80 2 198 284 30 15 chr20 33298738 33298805 -38855077 + MIR SINE MIR 189 256 -6 352 280 34 0 chr20 33298918 33299041 -38854841 + MIR SINE MIR 43 166 -54 1525 150 6 73 chr20 33299041 33299138 -38854744 + AluJo SINE Alu 1 103 -209 2470 45 25 0 chr20 33299138 33299449 -38854433 + AluY SINE Alu 1 318 0 1525 150 6 73 chr20 33299449 33299663 -38854219 + AluJo SINE Alu 103 292 -20 239 224 206 47 chr20 33299704 33299811 -38854071 - L2 LINE L2 -22 3291 3168 212 267 17 0 chr20 33300107 33300167 -38853715 - L2 LINE L2 -9 3263 3203 316 217 66 47 chr20 33300834 33300940 -38852942 + MIR SINE MIR 93 200 -62 1090 170 0 75 chr20 33301014 33301225 -38852657 - AluJb SINE Alu -6 306 114 2270 100 7 0 chr20 33301225 33301516 -38852366 + AluSg SINE Alu 5 297 -13 1090 170 0 75 chr20 33301516 33301545 -38852337 - AluJb SINE Alu -198 114 84 274 252 76 23 chr20 33301553 33301684 -38852198 - L1ME4a LINE L1 -6 6115 5978 354 312 60 38 chr20 33301709 33302026 -38851856 - L1MC4a LINE L1 -1897 5911 5588 2277 82 38 0 chr20 33302027 33302318 -38851564 - AluSp SINE Alu -11 302 1 906 107 0 16 chr20 33302335 33302456 -38851426 - FLAM_C SINE Alu -16 127 9 672 269 74 37 chr20 33302516 33302784 -38851098 - L1MC4a LINE L1 -736 5561 5329 2432 96 0 0 chr20 33302784 33303096 -38850786 - AluSx SINE Alu 0 312 1 672 269 74 37 chr20 33303096 33303114 -38850768 - L1MC4a LINE L1 -968 5329 5313 416 359 51 8 chr20 33303199 33303553 -38850329 - L1MC4a LINE L1 -1099 5047 4679 937 282 0 8 chr20 33303553 33303808 -38850074 + MIR SINE MIR 2 254 -8 332 340 75 4 chr20 33303840 33304093 -38849789 - L1MC4a LINE L1 -1487 4659 4389 2214 110 3 0 chr20 33304109 33304399 -38849483 - AluSx SINE Alu -21 291 1 1630 206 3 3 chr20 33304504 33304791 -38849091 - AluJo SINE Alu -25 287 1 839 165 0 0 chr20 33304814 33305036 -38848846 - FLAM_C SINE Alu 0 222 1 205 158 92 79 chr20 33305273 33305349 -38848533 + L2 LINE L2 3173 3249 -23 369 178 0 0 chr20 33306313 33306386 -38847496 + LTR30 LTR ERV1 552 624 -98 216 289 0 0 chr20 33306548 33306600 -38847282 + MIR SINE MIR 49 100 -162 1387 182 244 100 chr20 33306759 33306826 -38847056 - MLT1F LTR MaLR -2 540 484 2168 114 0 22 chr20 33306826 33307143 -38846739 + AluSg SINE Alu 1 310 0 1387 182 244 100 chr20 33307143 33307547 -38846335 - MLT1F LTR MaLR -58 484 1 208 287 41 16 chr20 33307891 33308013 -38845869 + L3b LINE CR1 1292 1416 -167 27 0 0 0 chr20 33308153 33308180 -38845702 + AT_rich Low_complexity Low_complexity 1 27 0 235 206 152 0 chr20 33308222 33308314 -38845568 - L1ME4a LINE L1 0 6121 6016 1855 151 32 3 chr20 33308384 33308668 -38845214 + AluSx SINE Alu 1 292 -20 1818 132 0 51 chr20 33308681 33308976 -38844906 + AluJo SINE Alu 13 292 -20 845 219 12 0 chr20 33309038 33309198 -38844684 + FRAM SINE Alu 1 162 -4 1085 132 0 0 chr20 33309355 33309499 -38844383 - FRAM SINE Alu -33 143 1 353 197 99 0 chr20 33309670 33309741 -38844141 - L2 LINE L2 -2 3270 3193 213 250 62 0 chr20 33309887 33309951 -38843931 + MIR SINE MIR 87 154 -108 434 272 112 19 chr20 33310075 33310281 -38843601 - MIR SINE MIR -13 249 25 2010 210 64 67 chr20 33310836 33311380 -38842502 - MLT1E2 LTR MaLR 0 626 82 2066 96 0 0 chr20 33311380 33311664 -38842218 + AluSx SINE Alu 25 308 0 2010 210 64 67 chr20 33311664 33311746 -38842136 - MLT1E2 LTR MaLR -544 82 1 239 296 56 0 chr20 33312293 33312401 -38841481 - MIR SINE MIR -82 180 67 198 273 0 0 chr20 33312393 33312437 -38841445 - MIR SINE MIR 0 262 219 * 269 262 146 10 chr20 33312547 33312650 -38841232 - MIR SINE MIR -125 137 21 212 273 11 11 chr20 33313667 33313755 -38840127 + C-rich Low_complexity Low_complexity 6 93 0 195 133 33 17 chr20 33313756 33313816 -38840066 + (CCG)n Simple_repeat Simple_repeat 2 62 0 21 0 0 0 chr20 33314137 33314158 -38839724 + GC_rich Low_complexity Low_complexity 1 21 0 415 286 28 22 chr20 33314477 33314659 -38839223 - MER5A DNA MER1_type 0 189 7 182 37 37 0 chr20 33315968 33315995 -38837887 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1203 81 7 0 chr20 33315995 33316144 -38837738 - AluSp SINE Alu -163 150 1 1248 172 44 24 chr20 33316199 33316449 -38837433 + AluJo SINE Alu 36 290 -22 2241 108 13 0 chr20 33316455 33316761 -38837121 + AluSg SINE Alu 1 310 0 2309 83 17 10 chr20 33316881 33317183 -38836699 + AluSx SINE Alu 1 304 -8 2514 53 0 25 chr20 33317452 33317771 -38836111 + AluY SINE Alu 1 311 0 244 195 169 0 chr20 33318647 33318724 -38835158 - MER94 DNA DNA -35 99 10 400 218 0 45 chr20 33318738 33318848 -38835034 - L2 LINE L2 -181 3091 2987 223 267 105 0 chr20 33319051 33319137 -38834745 - MIR SINE MIR -19 243 149 1868 159 0 7 chr20 33319325 33319615 -38834267 - AluJb SINE Alu -24 288 1 906 174 35 35 chr20 33319622 33319794 -38834088 - FAM SINE Alu -3 172 1 344 226 132 0 chr20 33319861 33319967 -38833915 + L2 LINE L2 3192 3311 -2 328 323 69 39 chr20 33320054 33320416 -38833466 - L2 LINE L2 -814 2500 2128 354 70 0 0 chr20 33320510 33320553 -38833329 - 5S rRNA rRNA -78 43 1 766 103 162 0 chr20 33320959 33321076 -38832806 + AluSq/x SINE Alu 2 137 -175 2006 121 16 22 chr20 33322193 33322507 -38831375 + AluSx SINE Alu 1 312 0 28 61 0 0 chr20 33323755 33323804 -38830078 + AT_rich Low_complexity Low_complexity 1 49 0 281 248 8 57 chr20 33324248 33324349 -38829533 - MER5A DNA MER1_type 0 189 40 2200 107 0 17 chr20 33324349 33324649 -38829233 - AluSx SINE Alu -17 295 1 281 248 8 57 chr20 33324649 33324680 -38829202 - MER5A DNA MER1_type -149 40 9 2288 103 27 0 chr20 33324816 33325116 -38828766 - AluSg SINE Alu -2 308 1 1026 169 33 107 chr20 33325364 33325606 -38828276 - MER58A DNA MER1_type 0 224 1 1373 151 111 33 chr20 33325966 33326237 -38827645 + AluJo SINE Alu 1 292 -20 1806 176 0 3 chr20 33326395 33326684 -38827198 - AluJb SINE Alu -24 288 1 30 0 0 0 chr20 33326684 33326714 -38827168 + AT_rich Low_complexity Low_complexity 1 30 0 1401 196 50 21 chr20 33326714 33326994 -38826888 - AluJo SINE Alu -24 288 1 23 68 0 0 chr20 33327033 33327077 -38826805 + AT_rich Low_complexity Low_complexity 1 44 0 350 231 192 8 chr20 33327522 33327652 -38826230 + L2 LINE L2 3160 3313 0 2234 120 0 0 chr20 33327690 33327990 -38825892 - AluSg SINE Alu -10 300 1 847 118 15 15 chr20 33328032 33328167 -38825715 - FLAM_C SINE Alu -1 142 8 2280 97 0 0 chr20 33328192 33328480 -38825402 + AluSq SINE Alu 1 288 -25 2067 116 27 3 chr20 33328682 33328975 -38824907 + AluSx SINE Alu 1 300 -12 1698 161 70 0 chr20 33329114 33329387 -38824495 - AluJb SINE Alu -16 296 5 1514 164 30 43 chr20 33329393 33329692 -38824190 - AluJo SINE Alu -17 295 1 614 146 127 0 chr20 33330022 33330132 -38823750 - MSTC LTR MaLR -1 427 304 765 114 57 0 chr20 33330132 33330237 -38823645 - AluSq/x SINE Alu -200 112 2 413 267 70 37 chr20 33330238 33330281 -38823601 - L1MC4 LINE L1 -190 7852 7812 2002 106 62 3 chr20 33330281 33330573 -38823309 + AluSx SINE Alu 1 309 -3 413 267 70 37 chr20 33330573 33330716 -38823166 - L1MC4 LINE L1 -230 7812 7660 1814 158 3 7 chr20 33330764 33331080 -38822802 - AluJb SINE Alu 0 316 2 343 0 0 41 chr20 33331320 33331369 -38822513 + (TTTTA)n Simple_repeat Simple_repeat 2 48 0 2150 112 0 3 chr20 33331387 33331673 -38822209 - AluSx SINE Alu -27 285 1 209 84 76 34 chr20 33331869 33331988 -38821894 + (TA)n Simple_repeat Simple_repeat 1 124 0 565 96 14 0 chr20 33332053 33332126 -38821756 + AluS SINE Alu 2 75 -238 385 105 86 0 chr20 33332144 33332306 -38821576 + (TA)n Simple_repeat Simple_repeat 2 177 0 528 110 14 0 chr20 33332308 33332381 -38821501 - AluS SINE Alu -237 75 2 1583 167 104 27 chr20 33332571 33332749 -38821133 - MER46B DNA MER2_type -2495 236 73 2274 113 0 0 chr20 33332749 33333050 -38820832 - AluSx SINE Alu -11 301 1 1583 167 104 27 chr20 33333050 33333070 -38820812 - MER46B DNA MER2_type -2658 73 56 279 0 0 0 chr20 33333070 33333101 -38820781 + (TG)n Simple_repeat Simple_repeat 2 32 0 1598 189 29 7 chr20 33333101 33333256 -38820626 - AluJb SINE Alu -26 286 121 333 0 0 0 chr20 33333256 33333293 -38820589 + (TG)n Simple_repeat Simple_repeat 2 38 0 1598 189 29 7 chr20 33333293 33333417 -38820465 - AluJb SINE Alu -191 121 1 1583 167 104 27 chr20 33333417 33333551 -38820331 - MER46B DNA MER2_type -2674 57 1 1586 99 5 18 chr20 33333943 33334164 -38819718 + AluSq SINE Alu 1 218 -95 2109 153 0 3 chr20 33334270 33334458 -38819424 - AluSx SINE Alu 0 312 124 207 0 0 0 chr20 33334458 33334481 -38819401 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2109 153 0 3 chr20 33334481 33334605 -38819277 - AluSx SINE Alu -188 124 1 2280 105 0 0 chr20 33334641 33334945 -38818937 + AluSx SINE Alu 1 304 -8 21 57 0 0 chr20 33335053 33335088 -38818794 + AT_rich Low_complexity Low_complexity 1 35 0 2123 100 7 20 chr20 33335097 33335396 -38818486 + AluSq SINE Alu 1 295 -18 1588 185 27 7 chr20 33335568 33335866 -38818016 + AluJo SINE Alu 2 305 -7 298 161 0 36 chr20 33335989 33336045 -38817837 + L2 LINE L2 2681 2734 -580 345 346 0 44 chr20 33336071 33336207 -38817675 + L2 LINE L2 2842 2971 -343 200 158 26 0 chr20 33336217 33336255 -38817627 + L2 LINE L2 3268 3306 -7 1739 179 18 0 chr20 33336313 33336598 -38817284 - AluJb SINE Alu -22 290 1 2595 53 0 0 chr20 33336611 33336911 -38816971 - AluY SINE Alu -11 300 1 2026 114 3 60 chr20 33337040 33337372 -38816510 - AluSp SINE Alu 0 313 1 1769 144 3 52 chr20 33337586 33337891 -38815991 + AluJb SINE Alu 1 290 -22 324 301 52 39 chr20 33337992 33338145 -38815737 - MIR3 SINE MIR -6 202 48 2473 56 0 7 chr20 33338400 33338705 -38815177 - AluY SINE Alu -8 303 1 2130 111 37 0 chr20 33339296 33339593 -38814289 - AluSx SINE Alu -4 308 1 539 307 141 49 chr20 33340733 33341307 -38812575 + L2 LINE L2 2557 3267 -5 2035 144 0 0 chr20 33341523 33341815 -38812067 - AluSx SINE Alu -20 292 1 381 213 147 93 chr20 33341815 33342040 -38811842 - HAL1 LINE L1 -985 1522 1286 1263 152 145 29 chr20 33342128 33342404 -38811478 + AluSx SINE Alu 1 308 -4 286 250 40 30 chr20 33342437 33342537 -38811345 - HAL1 LINE L1 -1599 908 808 1391 249 109 15 chr20 33342846 33343248 -38810634 + L2 LINE L2 2225 2664 -650 2055 127 0 3 chr20 33343266 33343573 -38810309 - AluSx SINE Alu 0 306 1 469 251 45 56 chr20 33343604 33343783 -38810099 - L1MEc LINE L1 -2258 3957 3781 25 0 0 0 chr20 33343975 33344000 -38809882 + AT_rich Low_complexity Low_complexity 1 25 0 419 305 66 47 chr20 33344266 33344584 -38809298 - L1ME3 LINE L1 -212 5950 5627 1946 119 65 0 chr20 33344688 33344965 -38808917 - AluSx SINE Alu -17 295 1 1739 158 56 6 chr20 33345110 33345433 -38808449 - MER47A DNA MER2_type 0 366 28 279 234 26 26 chr20 33345480 33345557 -38808325 - L1ME1 LINE L1 -25 6141 6065 22 0 0 0 chr20 33345565 33345587 -38808295 + AT_rich Low_complexity Low_complexity 1 22 0 829 177 27 0 chr20 33345587 33345734 -38808148 - FRAM SINE Alu -25 151 1 2242 231 28 54 chr20 33345734 33345981 -38807901 - L1ME1 LINE L1 -95 6140 5888 1836 157 27 7 chr20 33345981 33346275 -38807607 - AluJo SINE Alu 0 312 13 2242 231 28 54 chr20 33346275 33346580 -38807302 - L1ME1 LINE L1 -347 5888 5577 1788 173 3 16 chr20 33346580 33346886 -38806996 - AluJo SINE Alu -10 302 1 2242 231 28 54 chr20 33346886 33347208 -38806674 - L1ME1 LINE L1 -658 5577 2212 873 201 0 6 chr20 33347208 33347377 -38806505 - AluJo/FRAM SINE Alu -9 303 136 1998 107 11 0 chr20 33347379 33347649 -38806233 - AluSq SINE Alu -12 301 29 3175 227 110 55 chr20 33347743 33348578 -38805304 - L1MEc LINE L1 -3161 3054 2266 2188 108 0 0 chr20 33348578 33348865 -38805017 - AluSg SINE Alu -21 289 3 3175 227 110 55 chr20 33348865 33348924 -38804958 - L1MEc LINE L1 -3949 2266 2212 1964 140 7 19 chr20 33348924 33349094 -38804788 - AluSx SINE Alu -8 304 138 2395 88 0 3 chr20 33349094 33349399 -38804483 - AluSg SINE Alu -6 304 1 1964 140 7 19 chr20 33349399 33349536 -38804346 - AluSx SINE Alu -174 138 1 3175 227 110 55 chr20 33349536 33349816 -38804066 - L1MEc LINE L1 -4003 2212 1949 2073 136 0 0 chr20 33349816 33350111 -38803771 - AluSx SINE Alu -17 295 1 3175 227 110 55 chr20 33350111 33350898 -38802984 - L1MEc LINE L1 -4266 1949 973 2161 135 0 0 chr20 33350898 33351194 -38802688 - AluSx SINE Alu -14 298 3 3175 227 110 55 chr20 33351194 33351533 -38802349 - L1MEc LINE L1 -5242 973 654 223 350 44 22 chr20 33351664 33351801 -38802081 + L2 LINE L2 2595 2734 -580 743 56 64 30 chr20 33351980 33352119 -38801763 + MER30B DNA MER1_type 1 105 -85 1080 144 10 36 chr20 33352126 33352320 -38801562 - AluSg SINE Alu -3 309 121 868 153 0 0 chr20 33352366 33352497 -38801385 - AluSg SINE Alu -179 131 1 2054 114 13 10 chr20 33352497 33352796 -38801086 - AluSx SINE Alu -12 300 1 551 141 0 12 chr20 33352841 33352926 -38800956 + MER30B DNA MER1_type 147 230 0 464 167 44 0 chr20 33352985 33353075 -38800807 - L1MD3 LINE L1 -189 7806 7713 373 235 73 19 chr20 33353076 33353288 -38800594 - L1ME1 LINE L1 -263 5903 5796 243 73 49 0 chr20 33353265 33353306 -38800576 - L1MB5 LINE L1 0 6174 6132 * 856 120 0 15 chr20 33353306 33353439 -38800443 - AluSg/x SINE Alu -1 308 178 1246 202 24 12 chr20 33353439 33353686 -38800196 - L1MB5 LINE L1 -42 6132 5883 2741 256 111 45 chr20 33353686 33353697 -38800185 - L1MEc LINE L1 -4746 1650 1641 2766 23 0 0 chr20 33353697 33354006 -38799876 - AluYa5 SINE Alu -2 309 1 2741 256 111 45 chr20 33354006 33354053 -38799829 - L1MEc LINE L1 -4755 1641 1599 1767 125 107 4 chr20 33354053 33354325 -38799557 + AluSq SINE Alu 1 300 -13 2741 256 111 45 chr20 33354325 33354847 -38799035 - L1MEc LINE L1 -4797 1599 1113 2287 119 0 0 chr20 33354847 33355159 -38798723 - AluSx SINE Alu 0 312 1 2741 256 111 45 chr20 33355159 33356066 -38797816 - L1MEc LINE L1 -5283 1113 63 889 253 31 83 chr20 33356078 33356536 -38797346 - L1MD2 LINE L1 -2 6357 5924 1321 124 148 42 chr20 33356539 33356620 -38797262 - MER44D DNA MER2_type -1882 609 538 207 0 0 0 chr20 33356620 33356643 -38797239 + (TG)n Simple_repeat Simple_repeat 2 24 0 1321 124 148 42 chr20 33356643 33356659 -38797223 - MER44D DNA MER2_type -1953 538 525 2118 116 3 7 chr20 33356659 33356953 -38796929 - AluSx SINE Alu -19 293 1 1321 124 148 42 chr20 33356953 33357137 -38796745 - MER44D DNA MER2_type -1966 525 27 4268 224 57 48 chr20 33357145 33357341 -38796541 - L1MD2 LINE L1 -434 5925 5732 709 153 54 0 chr20 33357341 33357452 -38796430 - FLAM_C SINE Alu -16 117 1 4268 224 57 48 chr20 33357452 33358505 -38795377 - L1MD2 LINE L1 -627 5732 4690 1698 181 7 0 chr20 33358505 33358804 -38795078 - AluJo SINE Alu -3 309 9 4268 224 57 48 chr20 33358804 33358975 -38794907 - L1MD2 LINE L1 -1669 4690 4522 2660 134 26 0 chr20 33358975 33359394 -38794488 - L1MA4 LINE L1 -1 6299 5870 4268 224 57 48 chr20 33359394 33360004 -38793878 - L1MD2 LINE L1 -1837 4522 3879 355 166 165 9 chr20 33360006 33360131 -38793751 - L1ME LINE L1 -721 5443 5299 1807 219 77 44 chr20 33360182 33360223 -38793659 - L1MC4 LINE L1 -142 7900 7862 1399 147 191 8 chr20 33360223 33360475 -38793407 - AluJo SINE Alu -4 298 1 1807 219 77 44 chr20 33360475 33361003 -38792879 - L1MC4 LINE L1 -180 7862 7312 322 96 0 19 chr20 33361009 33361061 -38792821 - AluSp/q SINE Alu -11 292 242 846 277 112 10 chr20 33361096 33361363 -38792519 - L1MC4 LINE L1 -1249 6793 6490 1843 146 3 14 chr20 33361363 33361651 -38792231 + AluJb SINE Alu 1 285 -27 846 277 112 10 chr20 33361651 33361686 -38792196 - L1MC4 LINE L1 -1552 6490 6460 2020 125 0 27 chr20 33362161 33362458 -38791424 + AluSx SINE Alu 5 293 -19 1080 246 122 52 chr20 33362484 33362556 -38791326 - L1ME LINE L1 -874 5272 5206 1660 165 39 7 chr20 33362556 33362841 -38791041 - AluJb SINE Alu -8 304 11 180 0 0 0 chr20 33362843 33362863 -38791019 + (GCCTG)n Simple_repeat Simple_repeat 1 20 0 1080 246 122 52 chr20 33362863 33363042 -38790840 - L1ME LINE L1 -940 5206 5041 2042 125 17 3 chr20 33363042 33363331 -38790551 - AluSx SINE Alu -19 293 1 1080 246 122 52 chr20 33363331 33363648 -38790234 - L1ME LINE L1 -1105 5041 4660 861 194 17 6 chr20 33363648 33363828 -38790054 - AluJo SINE Alu -9 303 122 884 183 110 38 chr20 33363828 33364049 -38789833 - L1ME LINE L1 -1491 4655 4403 2161 103 6 31 chr20 33364049 33364370 -38789512 - AluSq SINE Alu 0 313 1 884 183 110 38 chr20 33364370 33364465 -38789417 - L1ME LINE L1 -1743 4403 4316 1619 216 104 43 chr20 33364505 33364690 -38789192 - L1MC4 LINE L1 -106 7936 7764 1106 171 6 6 chr20 33364690 33364860 -38789022 + FAM SINE Alu 1 170 -5 1619 216 104 43 chr20 33364860 33365249 -38788633 - L1MC4 LINE L1 -278 7764 7327 1581 139 67 84 chr20 33365269 33365403 -38788479 - MER44D DNA MER2_type -1882 609 474 685 215 0 30 chr20 33365403 33365538 -38788344 - AluJo SINE Alu -171 131 1 1581 139 67 84 chr20 33365538 33365748 -38788134 - MER44D DNA MER2_type -2017 474 1 2029 237 115 62 chr20 33365748 33365844 -38788038 - L1MC4a LINE L1 -607 7201 7112 2300 114 0 9 chr20 33365844 33366159 -38787723 + AluSx SINE Alu 1 312 0 2029 237 115 62 chr20 33366159 33366310 -38787572 - L1MC4a LINE L1 -696 7112 6970 2190 108 6 19 chr20 33366310 33366625 -38787257 - AluSx SINE Alu -1 311 1 2141 126 13 7 chr20 33366634 33366935 -38786947 - AluSx SINE Alu -9 303 1 2029 237 115 62 chr20 33366935 33367596 -38786286 - L1MC4a LINE L1 -845 6963 6233 1397 160 153 8 chr20 33367692 33367954 -38785928 - AluJo SINE Alu 0 302 3 253 299 26 0 chr20 33367959 33368036 -38785846 + L1MC4a LINE L1 5542 5620 -2188 1242 229 61 57 chr20 33368050 33368575 -38785307 + L1MC4a LINE L1 5691 6217 -1591 899 232 171 70 chr20 33368653 33368701 -38785181 - HAL1 LINE L1 -608 1899 1857 645 205 9 0 chr20 33368701 33368813 -38785069 + MER81 DNA DNA 1 113 -1 899 232 171 70 chr20 33368813 33369418 -38784464 - HAL1 LINE L1 -650 1857 1180 22 0 0 0 chr20 33369502 33369524 -38784358 + AT_rich Low_complexity Low_complexity 1 22 0 647 205 0 33 chr20 33369532 33369654 -38784228 + FLAM_A SINE Alu 8 125 -17 809 292 96 84 chr20 33369676 33370069 -38783813 - HAL1 LINE L1 -1520 987 600 2148 107 0 7 chr20 33370069 33370406 -38783476 - AluSq SINE Alu 0 313 1 809 292 96 84 chr20 33370406 33370980 -38782902 - HAL1 LINE L1 -1907 600 8 432 222 8 34 chr20 33371042 33371159 -38782723 + L1ME2 LINE L1 4479 4592 -1554 404 125 0 0 chr20 33371177 33371241 -38782641 - L1MA4 LINE L1 -11 6289 6226 863 159 0 0 chr20 33371252 33371409 -38782473 - L1MA4 LINE L1 -129 6171 6015 230 240 70 10 chr20 33371618 33371718 -38782164 - L1M4 LINE L1 -348 5830 5725 864 190 118 97 chr20 33372052 33372383 -38781499 + MER46C DNA MER2_type 1 338 0 23 0 0 0 chr20 33372818 33372841 -38781041 + AT_rich Low_complexity Low_complexity 1 23 0 1629 167 10 42 chr20 33372861 33372994 -38780888 + AluJb SINE Alu 1 137 -175 2173 104 0 3 chr20 33372994 33373282 -38780600 + AluSg SINE Alu 1 287 -23 239 0 0 31 chr20 33373289 33373321 -38780561 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1629 167 10 42 chr20 33373321 33373490 -38780392 + AluJb SINE Alu 143 301 -11 1014 182 50 5 chr20 33373537 33373735 -38780147 - L1MB7 LINE L1 -15 6169 5963 443 227 100 105 chr20 33373767 33373918 -38779964 - L1M4 LINE L1 -1430 4716 4566 2337 116 0 0 chr20 33373918 33374228 -38779654 - AluSg SINE Alu 0 310 1 443 227 100 105 chr20 33374228 33374297 -38779585 - L1M4 LINE L1 -1580 4566 4498 1942 152 3 3 chr20 33374297 33374600 -38779282 - AluJo SINE Alu -9 303 1 443 227 100 105 chr20 33374600 33374739 -38779143 - L1M4 LINE L1 -1648 4498 4358 2219 106 7 0 chr20 33374776 33375077 -38778805 - AluSq SINE Alu -10 303 1 2499 172 113 81 chr20 33375855 33375946 -38777936 + L1ME2 LINE L1 5270 5357 -807 3049 65 2 12 chr20 33375946 33376348 -38777534 + L1PA8 LINE L1 5775 6172 0 2499 172 113 81 chr20 33376348 33376955 -38776927 + L1ME2 LINE L1 5357 6004 -160 2518 40 0 34 chr20 33376955 33377276 -38776606 - AluY SINE Alu -1 310 1 2499 172 113 81 chr20 33377276 33377443 -38776439 + L1ME2 LINE L1 6004 6164 0 391 238 0 10 chr20 33377476 33377577 -38776305 - L1MC4 LINE L1 -224 7818 7719 2377 89 0 0 chr20 33377678 33377982 -38775900 - AluSg SINE Alu -6 304 1 570 91 53 174 chr20 33378260 33378321 -38775561 + AluJo SINE Alu 21 88 -224 1874 127 16 38 chr20 33378321 33378635 -38775247 - AluSx SINE Alu -4 308 2 1809 157 7 0 chr20 33378639 33378946 -38774936 - AluSx SINE Alu 0 309 1 570 91 53 174 chr20 33378946 33379010 -38774872 + AluJo SINE Alu 91 136 -176 635 292 102 39 chr20 33379255 33379350 -38774532 - L1ME4a LINE L1 0 6121 6033 2189 106 0 3 chr20 33379350 33379651 -38774231 + AluSx SINE Alu 1 300 -12 635 292 102 39 chr20 33379651 33379887 -38773995 - L1ME4a LINE L1 -88 6033 5769 1196 251 77 101 chr20 33379889 33380804 -38773078 - L1ME3A LINE L1 0 6170 5274 2021 118 7 0 chr20 33380823 33381102 -38772780 - AluSx SINE Alu -31 281 1 536 359 104 20 chr20 33381112 33381388 -38772494 - L1ME3A LINE L1 -875 5271 4969 2259 93 3 16 chr20 33381646 33381959 -38771923 - AluSc SINE Alu 0 309 1 310 288 45 128 chr20 33382561 33383030 -38770852 + L2 LINE L2 2843 3272 0 2242 119 3 0 chr20 33383747 33384058 -38769824 - AluSx SINE Alu 0 312 1 219 249 263 3 chr20 33384115 33384227 -38769655 + MIR3 SINE MIR 12 154 -97 184 325 92 33 chr20 33385320 33385440 -38768442 + L2 LINE L2 3145 3271 -1 3087 181 32 18 chr20 33387182 33387735 -38766147 - MER68 LTR ERV1 -1 561 1 303 250 71 57 chr20 33395337 33395477 -38758405 + MIR SINE MIR 35 176 -86 1255 144 79 18 chr20 33396241 33396470 -38757412 - AluJo SINE Alu -17 295 53 393 266 88 6 chr20 33397246 33397416 -38756466 + L1MC4 LINE L1 1943 6983 -1339 371 397 42 35 chr20 33397310 33397622 -38756260 - L1MC4 LINE L1 -1339 6703 6390 * 234 0 0 0 chr20 33402501 33402527 -38751355 + (A)n Simple_repeat Simple_repeat 1 26 0 222 204 0 0 chr20 33402830 33402884 -38750998 + (TGG)n Simple_repeat Simple_repeat 1 54 0 323 246 152 11 chr20 33403913 33404022 -38749860 + MIR SINE MIR 29 151 -57 214 307 144 25 chr20 33406343 33406545 -38747337 + L2 LINE L2 2643 2868 -446 276 317 49 0 chr20 33408227 33408309 -38745573 + MIR SINE MIR 98 183 -79 221 231 0 19 chr20 33408722 33408774 -38745108 + (TCG)n Simple_repeat Simple_repeat 1 51 0 311 287 62 54 chr20 33408981 33409110 -38744772 + MIR SINE MIR 78 207 -55 181 320 0 0 chr20 33409823 33409873 -38744009 - L2 LINE L2 -87 3185 3136 182 268 62 62 chr20 33410098 33410195 -38743687 + MIR SINE MIR 28 124 -84 196 239 104 15 chr20 33410506 33410573 -38743309 - MIR3 SINE MIR -47 161 89 204 40 0 0 chr20 33412333 33412358 -38741524 + (CCCCAG)n Simple_repeat Simple_repeat 2 26 0 185 284 193 11 chr20 33412991 33413079 -38740803 - L2 LINE L2 -7 3306 3203 185 250 39 0 chr20 33413757 33413809 -38740073 + MIR SINE MIR 95 148 -60 233 330 57 0 chr20 33414240 33414328 -38739554 - Charlie8 DNA MER1_type -2244 173 81 1275 156 111 59 chr20 33414339 33414478 -38739404 - AluJo SINE Alu -8 304 174 2289 95 0 3 chr20 33414478 33414782 -38739100 - AluSq SINE Alu -10 303 1 1275 156 111 59 chr20 33414782 33414931 -38738951 - AluJo SINE Alu -138 174 1 980 237 95 0 chr20 33414954 33415306 -38738576 + L1MB4 LINE L1 5752 6161 -10 201 341 11 0 chr20 33415999 33416087 -38737795 + L2 LINE L2 2976 3064 -208 331 299 75 0 chr20 33416363 33416510 -38737372 + L2 LINE L2 2933 3090 -223 2441 81 0 0 chr20 33416510 33416819 -38737063 - AluY SINE Alu -2 309 1 238 291 156 22 chr20 33417043 33417222 -38736660 + MLT1K LTR MaLR 112 314 -274 2367 80 0 0 chr20 33417722 33418021 -38735861 + AluSc SINE Alu 1 299 -10 984 229 62 14 chr20 33419783 33420071 -38733811 - MER33 DNA MER1_type 0 324 23 2019 115 49 0 chr20 33421075 33421363 -38732519 - AluSx SINE Alu -8 304 3 2352 93 0 6 chr20 33423716 33424028 -38729854 + AluSg SINE Alu 1 310 0 213 326 35 0 chr20 33424103 33424189 -38729693 + MIR SINE MIR 84 172 -90 2285 100 3 3 chr20 33424459 33424768 -38729114 - AluSp SINE Alu -4 309 1 326 224 0 0 chr20 33425486 33425553 -38728329 - L2 LINE L2 0 3272 3206 2720 122 44 2 chr20 33426718 33427127 -38726755 + MSTB LTR MaLR 1 426 0 342 0 0 0 chr20 33431296 33431334 -38722548 + (CA)n Simple_repeat Simple_repeat 2 39 0 560 302 166 29 chr20 33431715 33432125 -38721757 - L2 LINE L2 0 3313 2848 545 258 8 0 chr20 33432314 33432442 -38721440 - MIR SINE MIR -73 189 61 196 299 60 0 chr20 33433141 33433208 -38720674 - MIR SINE MIR -165 97 27 288 0 0 0 chr20 33433340 33433372 -38720510 + (CA)n Simple_repeat Simple_repeat 2 33 0 259 122 24 0 chr20 33433422 33433463 -38720419 - L2 LINE L2 -17 3296 3255 1462 165 86 8 chr20 33433712 33433979 -38719903 - AluJb SINE Alu -24 288 1 760 189 0 23 chr20 33434547 33434679 -38719203 + FLAM_C SINE Alu 1 129 -4 21 0 0 0 chr20 33437052 33437073 -38716809 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 33437972 33437994 -38715888 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr20 33438396 33438420 -38715462 + GC_rich Low_complexity Low_complexity 1 24 0 213 94 0 0 chr20 33438541 33438573 -38715309 + (CTG)n Simple_repeat Simple_repeat 3 34 0 25 31 0 0 chr20 33438657 33438689 -38715193 + GC_rich Low_complexity Low_complexity 1 32 0 191 152 22 0 chr20 33438717 33438763 -38715119 + G-rich Low_complexity Low_complexity 2 48 0 482 295 6 22 chr20 33438790 33438973 -38714909 + G-rich Low_complexity Low_complexity 1 180 0 201 356 0 10 chr20 33439499 33439600 -38714282 + C-rich Low_complexity Low_complexity 2 101 0 33 25 0 0 chr20 33439662 33439702 -38714180 + GC_rich Low_complexity Low_complexity 1 40 0 288 70 0 0 chr20 33440156 33440199 -38713683 + (A)n Simple_repeat Simple_repeat 1 43 0 639 268 29 29 chr20 33441752 33442032 -38711850 + L1MC4 LINE L1 7284 7563 -479 2226 106 3 3 chr20 33442084 33442395 -38711487 + AluSx SINE Alu 1 311 -1 332 297 209 12 chr20 33442433 33442893 -38710989 - L2 LINE L2 -159 3154 2618 297 241 48 12 chr20 33442918 33443001 -38710881 + MIR SINE MIR 52 137 -125 1721 148 0 7 chr20 33443013 33443291 -38710591 - AluSx SINE Alu 0 312 37 566 246 80 0 chr20 33443359 33443521 -38710361 + MLT1F LTR MaLR 1 184 -380 412 321 37 52 chr20 33443591 33443831 -38710051 - L1MC/D LINE L1 -763 5383 5349 1136 66 17 22 chr20 33443831 33444012 -38709870 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 412 321 37 52 chr20 33444012 33444444 -38709438 - L1MC/D LINE L1 -797 5349 4912 967 209 0 0 chr20 33444444 33444616 -38709266 - FRAM SINE Alu -4 172 1 976 130 0 0 chr20 33444761 33444937 -38708945 + AluYa5 SINE Alu 136 311 0 2225 110 0 0 chr20 33444944 33445243 -38708639 + AluSx SINE Alu 1 299 -13 245 146 21 0 chr20 33445243 33445291 -38708591 + (TA)n Simple_repeat Simple_repeat 1 49 0 225 338 110 48 chr20 33445875 33446103 -38707779 + L2 LINE L2 2699 2940 -374 353 375 29 45 chr20 33446127 33446436 -38707446 - L2 LINE L2 -5 3308 3005 1468 246 75 39 chr20 33446855 33446931 -38706951 + L1ME3A LINE L1 5616 5688 -482 1817 174 17 0 chr20 33446931 33447230 -38706652 + AluJo SINE Alu 1 304 -8 1468 246 75 39 chr20 33447230 33447689 -38706193 + L1ME3A LINE L1 5688 6170 0 331 307 81 42 chr20 33447762 33448004 -38705878 - MIR SINE MIR -28 234 43 529 294 29 24 chr20 33448569 33448739 -38705143 + MIR SINE MIR 65 235 -27 322 264 41 58 chr20 33448791 33448912 -38704970 - L2 LINE L2 0 3272 3154 2238 119 7 0 chr20 33449068 33449378 -38704504 + AluSx SINE Alu 1 312 0 242 268 12 24 chr20 33449514 33449596 -38704286 + CT-rich Low_complexity Low_complexity 3 83 0 217 371 51 34 chr20 33450693 33450783 -38703099 - MIR3 SINE MIR -15 193 106 1579 132 33 4 chr20 33450783 33451025 -38702857 + AluJo SINE Alu 5 253 -59 217 371 51 34 chr20 33451025 33451109 -38702773 - MIR3 SINE MIR -102 106 16 804 333 123 0 chr20 33451284 33451635 -38702247 + L2 LINE L2 2919 3312 -1 2194 98 16 10 chr20 33451643 33451948 -38701934 - AluSq SINE Alu -6 307 1 189 0 0 0 chr20 33452154 33452175 -38701707 + (A)n Simple_repeat Simple_repeat 1 21 0 2081 130 3 7 chr20 33453582 33453889 -38699993 + AluJb SINE Alu 5 310 -2 282 157 0 43 chr20 33453909 33453968 -38699914 + AluJb SINE Alu 69 126 -176 2088 111 3 20 chr20 33453968 33454274 -38699608 - AluSg SINE Alu -9 301 1 2161 138 0 0 chr20 33454554 33454865 -38699017 + AluSx SINE Alu 1 311 -1 242 308 71 33 chr20 33454895 33455135 -38698747 + L1M4 LINE L1 4677 4925 -1221 412 239 9 9 chr20 33455200 33455309 -38698573 + L1MC3 LINE L1 6617 6725 -1060 689 174 65 43 chr20 33455309 33455447 -38698435 - FLAM_C SINE Alu -2 141 1 1595 68 0 89 chr20 33455450 33455698 -38698184 - AluY SINE Alu -11 300 75 4387 178 32 50 chr20 33455702 33456787 -38697095 + L1MC3 LINE L1 6720 7785 0 317 275 170 23 chr20 33456791 33456962 -38696920 + L1M4 LINE L1 5023 5218 -928 888 261 31 39 chr20 33456962 33457376 -38696506 + HAL1 LINE L1 2028 2438 -69 2090 104 21 0 chr20 33457408 33457695 -38696187 + AluSx SINE Alu 1 293 -19 2338 87 3 0 chr20 33457726 33458036 -38695846 + AluSq SINE Alu 1 311 -2 359 344 85 54 chr20 33458931 33459372 -38694510 - L1MEc LINE L1 -4082 2228 814 2372 93 0 0 chr20 33459376 33459687 -38694195 + AluY SINE Alu 1 311 0 2023 99 25 0 chr20 33459711 33459995 -38693887 - AluSc SINE Alu -18 291 1 1837 129 54 75 chr20 33460401 33460538 -38693344 + L1MB4 LINE L1 5720 5858 -322 1683 161 40 17 chr20 33460538 33460837 -38693045 + AluJb SINE Alu 1 306 -6 1837 129 54 75 chr20 33460837 33461164 -38692718 + L1MB4 LINE L1 5858 6174 -6 2311 83 3 0 chr20 33461477 33461778 -38692104 + AluSp SINE Alu 1 302 -11 1829 131 3 14 chr20 33462825 33463142 -38690740 + AluSg SINE Alu 1 314 0 494 309 70 66 chr20 33463994 33464359 -38689523 + L2 LINE L2 2856 3225 -88 1961 119 3 3 chr20 33464359 33464645 -38689237 + AluSx SINE Alu 27 312 0 494 309 70 66 chr20 33464645 33464735 -38689147 + L2 LINE L2 3225 3313 0 24 0 0 0 chr20 33466733 33466757 -38687125 + AT_rich Low_complexity Low_complexity 1 24 0 1754 131 0 85 chr20 33466800 33467129 -38686753 + AluJo SINE Alu 1 301 -11 444 230 44 7 chr20 33467172 33467307 -38686575 + Charlie8 DNA MER1_type 126 265 -2152 305 191 67 29 chr20 33467590 33467695 -38686187 - L1ME4a LINE L1 0 6121 6013 528 255 102 59 chr20 33467794 33468116 -38685766 - L1ME4a LINE L1 -237 5884 5549 1445 196 34 19 chr20 33468409 33468678 -38685204 + L1MB4 LINE L1 5853 6129 -51 1555 148 79 7 chr20 33468678 33468969 -38684913 + AluJo SINE Alu 1 312 0 1445 196 34 19 chr20 33468969 33469021 -38684861 + L1MB4 LINE L1 6129 6179 -1 1981 133 7 3 chr20 33469307 33469608 -38684274 + AluSx SINE Alu 1 302 -10 504 291 29 17 chr20 33471665 33471840 -38682042 - MIR SINE MIR -40 222 46 283 212 73 53 chr20 33472979 33473098 -38680784 + MIR SINE MIR 60 180 -82 241 277 134 8 chr20 33473105 33473224 -38680658 - MIR3 SINE MIR -74 134 1 437 233 18 2 chr20 33474100 33474229 -38679653 - MIR SINE MIR -62 146 45 1074 170 0 0 chr20 33474905 33475070 -38678812 - FRAM SINE Alu -1 165 1 2277 74 7 10 chr20 33475101 33475400 -38678482 + AluY SINE Alu 1 298 -13 264 299 72 0 chr20 33476563 33476660 -38677222 - MIR SINE MIR -61 147 44 408 350 49 0 chr20 33479404 33479547 -38674335 - L3 LINE CR1 -54 1523 1374 460 254 73 55 chr20 33480456 33480620 -38673262 + MIR SINE MIR 2 167 -61 1582 161 68 7 chr20 33480692 33480842 -38673040 - AluJo SINE Alu -12 300 161 2092 144 0 6 chr20 33480842 33481155 -38672727 - AluSx SINE Alu -1 311 1 1582 161 68 7 chr20 33481155 33481283 -38672599 - AluJo SINE Alu -151 161 5 429 288 94 12 chr20 33481759 33481929 -38671953 + MIR SINE MIR 31 214 -48 214 269 19 0 chr20 33482408 33482460 -38671422 + MIR SINE MIR 188 240 -22 446 281 23 16 chr20 33484064 33484192 -38669690 + L2 LINE L2 3185 3313 0 405 318 126 9 chr20 33484209 33484423 -38669459 + MIR SINE MIR 22 260 -2 182 321 0 0 chr20 33484944 33484997 -38668885 + MIR SINE MIR 73 125 -137 2471 54 0 0 chr20 33485357 33485651 -38668231 + AluY SINE Alu 1 294 -17 407 197 28 148 chr20 33485666 33485737 -38668145 + L1ME3A LINE L1 6046 6093 -77 2247 105 3 0 chr20 33485737 33486041 -38667841 + AluSp SINE Alu 1 305 -8 407 197 28 148 chr20 33486041 33486111 -38667771 + L1ME3A LINE L1 6093 6170 0 242 188 47 0 chr20 33486138 33486202 -38667680 - L1MB2 LINE L1 -1 6170 6104 218 255 87 137 chr20 33486411 33486465 -38667417 + MIR SINE MIR 66 121 -141 1911 119 63 0 chr20 33486465 33486750 -38667132 - AluSx SINE Alu -9 303 1 218 255 87 137 chr20 33486750 33486856 -38667026 + MIR SINE MIR 121 218 -44 848 168 8 0 chr20 33488102 33488233 -38665649 + FLAM_A SINE Alu 1 132 -1 739 201 123 7 chr20 33488394 33488548 -38665334 + MER5A DNA MER1_type 18 189 0 1724 134 0 88 chr20 33489668 33489997 -38663885 + AluJb SINE Alu 1 300 -12 212 313 9 80 chr20 33491113 33491225 -38662657 + MIR SINE MIR 88 191 -71 23 54 0 0 chr20 33491573 33491610 -38662272 + GC_rich Low_complexity Low_complexity 1 37 0 22 70 0 0 chr20 33491632 33491675 -38662207 + GC_rich Low_complexity Low_complexity 1 43 0 226 262 21 41 chr20 33492022 33492167 -38661715 + (CCCG)n Simple_repeat Simple_repeat 1 142 0 217 321 207 7 chr20 33492225 33492365 -38661517 - MIR SINE MIR -14 248 81 466 260 198 6 chr20 33492508 33492685 -38661197 - MIR SINE MIR -22 240 30 2143 123 0 0 chr20 33492874 33493176 -38660706 - AluSx SINE Alu -10 302 1 204 329 14 14 chr20 33493216 33493289 -38660593 - MIR3 SINE MIR -19 189 117 480 18 0 0 chr20 33493543 33493600 -38660282 + (TCCC)n Simple_repeat Simple_repeat 2 58 0 310 270 14 0 chr20 33494297 33494371 -38659511 + MIR SINE MIR 14 88 -174 203 225 352 14 chr20 33494454 33494596 -38659286 + MIR3 SINE MIR 3 192 -16 226 342 26 8 chr20 33494736 33494853 -38659029 + MIR SINE MIR 31 149 -113 223 232 18 0 chr20 33495649 33495705 -38658177 - L2 LINE L2 0 3313 3257 323 295 78 16 chr20 33495739 33495868 -38658014 + MIR SINE MIR 98 234 -28 235 364 42 17 chr20 33495910 33496028 -38657854 - MIR SINE MIR -34 228 108 360 0 0 0 chr20 33496105 33496145 -38657737 + (CA)n Simple_repeat Simple_repeat 2 41 0 187 261 0 0 chr20 33496318 33496364 -38657518 + L2 LINE L2 3268 3313 0 340 240 144 144 chr20 33497368 33497460 -38656422 + MIR SINE MIR 2 93 -169 1891 152 3 3 chr20 33497460 33497750 -38656132 - AluJb SINE Alu -22 290 1 340 240 144 144 chr20 33497750 33497907 -38655975 + MIR SINE MIR 92 251 -11 489 285 52 0 chr20 33497908 33498080 -38655802 + MIR SINE MIR 43 223 -39 275 280 34 25 chr20 33498237 33498355 -38655527 - L2 LINE L2 -162 3110 2992 1459 122 0 39 chr20 33498377 33498434 -38655448 + AluSg/x SINE Alu 85 143 -169 2195 112 3 0 chr20 33498434 33498737 -38655145 + AluSx SINE Alu 1 304 -8 1459 122 0 39 chr20 33498737 33498909 -38654973 + AluSg/x SINE Alu 143 305 -7 450 314 47 26 chr20 33499170 33499361 -38654521 - L2 LINE L2 -551 2763 2569 275 354 62 42 chr20 33499437 33499725 -38654157 - L2 LINE L2 -397 2917 2624 268 255 69 20 chr20 33499802 33499904 -38653978 - MIR SINE MIR -150 112 6 598 236 88 0 chr20 33499957 33500105 -38653777 - MIR SINE MIR -70 192 32 1113 128 0 39 chr20 33500213 33500393 -38653489 + FRAM SINE Alu 1 165 -11 184 255 21 0 chr20 33500435 33500482 -38653400 + L2 LINE L2 2107 2154 -1160 660 204 136 6 chr20 33500671 33500847 -38653035 + L2 LINE L2 2360 2558 -756 180 373 0 0 chr20 33500888 33500947 -38652935 + MIR3 SINE MIR 100 158 -50 2328 91 3 0 chr20 33501033 33501342 -38652540 - AluSg SINE Alu 0 310 1 1118 123 69 30 chr20 33501342 33501536 -38652346 - AluSp SINE Alu -11 302 98 1993 119 31 0 chr20 33501536 33501829 -38652053 - AluSp SINE Alu -10 303 2 378 244 23 0 chr20 33501959 33502045 -38651837 + L2 LINE L2 3185 3272 0 812 268 38 42 chr20 33502166 33502396 -38651486 - MIR SINE MIR -2 260 30 1816 151 3 3 chr20 33502396 33502687 -38651195 - AluJb SINE Alu -21 291 1 812 268 38 42 chr20 33502687 33502717 -38651165 - MIR SINE MIR -232 30 1 202 280 53 53 chr20 33502942 33503092 -38650790 + L2 LINE L2 2910 3059 -213 425 204 97 1 chr20 33503194 33503310 -38650572 - MIR SINE MIR -65 143 39 789 266 83 34 chr20 33503729 33504079 -38649803 + L1MC4a LINE L1 5529 5895 -1913 * 2738 159 24 14 chr20 33504077 33504567 -38649315 + L1MB8 LINE L1 5011 5515 -663 2071 106 3 0 chr20 33504567 33504872 -38649010 + AluSx SINE Alu 1 306 0 2738 159 24 14 chr20 33504872 33505191 -38648691 + L1MB8 LINE L1 5515 5829 -349 612 148 31 4 chr20 33505191 33505342 -38648540 - MER7A DNA MER2_type 0 336 120 1092 110 86 0 chr20 33505347 33505510 -38648372 - AluSg/x SINE Alu -16 294 118 488 109 0 174 chr20 33505510 33505560 -38648322 - MER7A DNA MER2_type -2925 113 56 1965 139 0 3 chr20 33505560 33505696 -38648186 + AluSx SINE Alu 1 136 -176 2345 87 0 10 chr20 33505696 33506006 -38647876 + AluSg SINE Alu 1 307 -3 1965 139 0 3 chr20 33506006 33506170 -38647712 + AluSx SINE Alu 136 300 -12 488 109 0 174 chr20 33506170 33506190 -38647692 - MER7A DNA MER2_type -2982 56 34 2074 123 0 0 chr20 33506190 33506475 -38647407 + AluSx SINE Alu 1 285 -27 366 74 0 0 chr20 33506475 33506529 -38647353 + (CAT)n Simple_repeat Simple_repeat 2 55 0 488 109 0 174 chr20 33506529 33506594 -38647288 - MER7A DNA MER2_type -3002 36 2 1692 132 38 74 chr20 33506594 33506885 -38646997 + L1MB8 LINE L1 5827 6104 -74 1861 167 3 3 chr20 33506885 33507185 -38646697 - AluJo SINE Alu -12 300 1 1692 132 38 74 chr20 33507185 33507258 -38646624 + L1MB8 LINE L1 6104 6178 0 24 0 0 0 chr20 33507469 33507493 -38646389 + AT_rich Low_complexity Low_complexity 1 24 0 2136 103 0 0 chr20 33507501 33507806 -38646076 + AluSq SINE Alu 1 305 0 1768 118 8 4 chr20 33507817 33508072 -38645810 + AluSx SINE Alu 1 256 -56 571 194 70 60 chr20 33508194 33508395 -38645487 + L2 LINE L2 2480 2682 -632 891 268 140 17 chr20 33508396 33508818 -38645064 + L2 LINE L2 2831 3304 -9 945 211 104 11 chr20 33508835 33509114 -38644768 + L1MD3 LINE L1 7689 7993 -2 2544 49 0 3 chr20 33509135 33509443 -38644439 + AluY SINE Alu 1 307 -4 276 344 51 32 chr20 33509922 33510079 -38643803 - MIR SINE MIR -4 258 99 708 330 62 71 chr20 33510106 33510315 -38643567 + L2 LINE L2 2823 3032 -240 1982 157 54 57 chr20 33510315 33510409 -38643473 + MLT1B LTR MaLR 1 94 -296 1360 194 56 18 chr20 33510409 33510693 -38643189 - AluJo SINE Alu -17 295 1 1982 157 54 57 chr20 33510693 33510986 -38642896 + MLT1B LTR MaLR 94 387 -3 708 330 62 71 chr20 33510986 33511228 -38642654 + L2 LINE L2 3032 3270 -2 199 348 61 17 chr20 33511374 33511489 -38642393 + L3 LINE CR1 586 705 -872 188 313 31 52 chr20 33511643 33511739 -38642143 - MIR SINE MIR -135 127 34 217 333 0 0 chr20 33511878 33511941 -38641941 - MIR SINE MIR -91 117 55 222 301 165 10 chr20 33512066 33512169 -38641713 + MIR SINE MIR 33 151 -57 1811 129 48 4 chr20 33512879 33513151 -38640731 + AluJb SINE Alu 1 284 -28 228 348 0 36 chr20 33513560 33513672 -38640210 - MIR3 SINE MIR -27 181 74 423 324 24 12 chr20 33513786 33513956 -38639926 - L2 LINE L2 -471 2843 2672 223 276 105 0 chr20 33514080 33514156 -38639726 + L3 LINE CR1 1419 1502 -75 337 247 282 11 chr20 33514190 33514364 -38639518 + L2 LINE L2 3027 3247 -25 321 250 26 0 chr20 33514418 33514494 -38639388 + L2 LINE L2 3187 3264 -8 481 280 15 0 chr20 33514634 33514766 -38639116 - MIR SINE MIR -96 166 33 355 270 21 5 chr20 33515431 33515557 -38638325 - MIR SINE MIR -58 150 34 997 238 44 4 chr20 33515619 33515867 -38638015 - MIR SINE MIR -3 259 2 512 266 178 6 chr20 33516766 33516935 -38636947 + MIR SINE MIR 20 217 -45 1084 127 0 0 chr20 33516935 33517112 -38636770 + AluJb SINE Alu 133 309 0 355 277 169 54 chr20 33517467 33517651 -38636231 + L1M4 LINE L1 3072 3276 -2870 272 173 8 45 chr20 33517699 33517832 -38636050 + GA-rich Low_complexity Low_complexity 2 129 0 202 267 0 0 chr20 33517836 33517881 -38636001 - L2 LINE L2 -17 3255 3211 352 294 0 10 chr20 33518174 33518276 -38635606 - MIR SINE MIR -57 151 51 596 273 74 9 chr20 33518792 33519008 -38634874 - MIR SINE MIR -31 231 2 228 290 16 0 chr20 33519008 33519039 -38634843 - MIR3 SINE MIR -43 165 134 428 232 65 36 chr20 33519039 33519177 -38634705 + MIR3 SINE MIR 4 145 -63 345 270 56 87 chr20 33520021 33520217 -38633665 + MIR SINE MIR 31 220 -42 1379 126 106 78 chr20 33520267 33520560 -38633322 + AluJo SINE Alu 6 306 -6 520 306 36 73 chr20 33520560 33520779 -38633103 - MIR SINE MIR -12 250 40 1240 258 83 48 chr20 33521038 33521457 -38632425 + L2 LINE L2 2880 3313 0 221 327 79 10 chr20 33521447 33521548 -38632334 - MIR SINE MIR -71 137 30 * 183 296 144 38 chr20 33521916 33522048 -38631834 - MIR SINE MIR -109 153 8 291 333 31 13 chr20 33522098 33522292 -38631590 + MIR SINE MIR 15 256 -6 325 218 11 46 chr20 33522296 33522383 -38631499 + (CACCAT)n Simple_repeat Simple_repeat 4 87 0 935 152 6 0 chr20 33522383 33522561 -38631321 + (CAT)n Simple_repeat Simple_repeat 1 179 0 438 208 19 19 chr20 33522526 33522685 -38631197 + (CACCAT)n Simple_repeat Simple_repeat 4 162 0 * 198 315 9 12 chr20 33523406 33523488 -38630394 - MIR SINE MIR -52 156 72 587 301 184 10 chr20 33523493 33524002 -38629880 - L2 LINE L2 -54 3259 2560 400 272 30 6 chr20 33524225 33524394 -38629488 + L2 LINE L2 3150 3313 0 679 242 101 0 chr20 33524494 33524672 -38629210 - MIR SINE MIR -20 242 47 508 300 12 19 chr20 33525382 33525542 -38628340 - MIR SINE MIR -75 187 29 2046 99 0 74 chr20 33525645 33525992 -38627890 - AluSx SINE Alu 0 312 1 465 306 64 17 chr20 33526659 33526832 -38627050 + MIR SINE MIR 66 246 -16 376 272 194 27 chr20 33526858 33527044 -38626838 - MIR SINE MIR -25 237 30 617 228 15 66 chr20 33527447 33527520 -38626362 - MIR SINE MIR -48 214 139 1587 142 92 21 chr20 33527520 33527802 -38626080 - AluJb SINE Alu -10 302 1 617 228 15 66 chr20 33527802 33527925 -38625957 - MIR SINE MIR -123 139 28 608 142 79 16 chr20 33528095 33528222 -38625660 - MIR SINE MIR -107 155 21 360 301 73 7 chr20 33528512 33528648 -38625234 - MIR SINE MIR -71 191 47 401 302 9 9 chr20 33528766 33528882 -38625000 - MIR SINE MIR -49 213 98 219 227 106 0 chr20 33528898 33528964 -38624918 + MIR SINE MIR 113 185 -77 183 374 28 68 chr20 33529880 33530129 -38623753 + L2 LINE L2 2949 3187 -85 * 1556 271 53 23 chr20 33530115 33530951 -38622931 - L2 LINE L2 -43 3270 2413 219 272 196 0 chr20 33530990 33531082 -38622800 + MIR SINE MIR 28 137 -125 184 260 94 42 chr20 33531482 33531578 -38622304 + MIR SINE MIR 35 135 -73 782 165 8 8 chr20 33532048 33532181 -38621701 + FLAM_A SINE Alu 1 133 0 364 349 89 7 chr20 33532268 33532414 -38621468 - MIR SINE MIR -6 256 99 296 308 83 0 chr20 33532409 33532552 -38621330 - MIR SINE MIR -1 261 104 * 537 144 0 0 chr20 33532580 33532670 -38621212 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 231 256 70 35 chr20 33532674 33532760 -38621122 - MIR SINE MIR -170 92 4 1281 146 19 9 chr20 33532871 33533083 -38620799 - AluJo SINE Alu -15 297 84 342 300 14 64 chr20 33533194 33533334 -38620548 - MIR3 SINE MIR -63 145 13 270 275 9 18 chr20 33533726 33533835 -38620047 + (CA)n Simple_repeat Simple_repeat 1 108 0 494 281 33 7 chr20 33534630 33534783 -38619099 + MIR SINE MIR 83 239 -23 311 284 39 29 chr20 33535210 33535312 -38618570 + MIR3 SINE MIR 103 205 -3 180 0 0 0 chr20 33536368 33536388 -38617494 + (TG)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr20 33537778 33537807 -38616075 + GC_rich Low_complexity Low_complexity 1 29 0 210 255 10 41 chr20 33537877 33537975 -38615907 + G-rich Low_complexity Low_complexity 4 98 0 23 54 0 0 chr20 33538016 33538053 -38615829 + GC_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr20 33538100 33538128 -38615754 + GC_rich Low_complexity Low_complexity 1 28 0 23 68 0 0 chr20 33538199 33538243 -38615639 + GC_rich Low_complexity Low_complexity 1 44 0 296 266 16 0 chr20 33538496 33538560 -38615322 - MIR SINE MIR -62 146 82 335 287 56 0 chr20 33538676 33538784 -38615098 + L2 LINE L2 3143 3256 -16 185 297 232 0 chr20 33539474 33539602 -38614280 + MIR SINE MIR 79 240 -22 804 320 147 4 chr20 33539670 33540176 -38613706 - L2 LINE L2 -1 3312 2725 1599 141 54 22 chr20 33540615 33540892 -38612990 - AluJb SINE Alu -26 286 1 619 77 0 0 chr20 33541014 33541092 -38612790 - AluJo SINE Alu -234 78 1 296 307 52 33 chr20 33541231 33541384 -38612498 - MIR3 SINE MIR -30 178 23 208 236 55 0 chr20 33541677 33541732 -38612150 + L2 LINE L2 3028 3085 -187 216 0 0 0 chr20 33541880 33541904 -38611978 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 341 252 19 37 chr20 33542039 33542146 -38611736 + MIR SINE MIR 98 202 -60 327 286 107 9 chr20 33542170 33542282 -38611600 - L2 LINE L2 0 3272 3150 1922 133 7 10 chr20 33542305 33542605 -38611277 + AluJo SINE Alu 1 299 -13 2001 125 3 14 chr20 33542649 33542945 -38610937 + AluSx SINE Alu 1 293 -19 861 274 60 18 chr20 33543249 33543530 -38610352 + L2 LINE L2 3021 3313 0 225 0 0 0 chr20 33543544 33543569 -38610313 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 432 0 0 0 chr20 33543568 33543616 -38610266 + (TG)n Simple_repeat Simple_repeat 2 49 0 508 281 68 7 chr20 33543702 33543848 -38610034 + MIR SINE MIR 90 244 -18 233 343 38 19 chr20 33544310 33544415 -38609467 - MIR SINE MIR -145 117 11 189 0 0 0 chr20 33544451 33544472 -38609410 + (A)n Simple_repeat Simple_repeat 1 21 0 2070 103 69 0 chr20 33544474 33544764 -38609118 + AluSx SINE Alu 1 310 -2 1528 142 0 153 chr20 33544782 33545164 -38608718 + AluJo SINE Alu 1 312 0 269 309 63 26 chr20 33545614 33545805 -38608077 + L2 LINE L2 2902 3099 -173 244 331 58 8 chr20 33545865 33545986 -38607896 + MLT1K LTR MaLR 9 135 -453 2342 78 0 0 chr20 33546065 33546358 -38607524 + AluSx SINE Alu 1 293 -19 220 235 20 61 chr20 33546549 33546647 -38607235 + L2 LINE L2 2741 2834 -480 448 124 0 79 chr20 33546708 33546797 -38607085 - Tigger5 DNA MER2_type 0 2323 2242 2105 137 0 0 chr20 33546823 33547129 -38606753 - AluJb SINE Alu -5 307 2 281 226 12 71 chr20 33547131 33547215 -38606667 + Tigger5 DNA MER2_type 2242 2320 -3 * 431 175 0 12 chr20 33547215 33547294 -38606588 - Tigger5 DNA MER2_type -2245 78 1 310 310 30 103 chr20 33547295 33547595 -38606287 + L2 LINE L2 2940 3217 -55 255 119 0 0 chr20 33547726 33547768 -38606114 + MER103 DNA DNA 55 96 -70 434 241 127 32 chr20 33547798 33547956 -38605926 - MIR3 SINE MIR -15 193 21 983 243 4 61 chr20 33547982 33548185 -38605697 + MIR SINE MIR 17 205 -57 2133 103 14 0 chr20 33548185 33548477 -38605405 + AluSx SINE Alu 1 296 -16 983 243 4 61 chr20 33548477 33548520 -38605362 + MIR SINE MIR 205 249 -13 243 240 205 63 chr20 33549295 33549422 -38604460 + MIR SINE MIR 10 153 -62 443 250 30 30 chr20 33549682 33549814 -38604068 + MIR3 SINE MIR 23 154 -54 597 307 57 59 chr20 33549870 33550010 -38603872 + L2 LINE L2 2831 2970 -302 2058 110 3 10 chr20 33550010 33550302 -38603580 - AluSx SINE Alu -22 290 1 597 307 57 59 chr20 33550302 33550601 -38603281 + L2 LINE L2 2970 3269 -3 191 333 60 12 chr20 33551030 33551114 -38602768 - MIR SINE MIR -116 146 59 2449 74 0 0 chr20 33551159 33551470 -38602412 + AluY SINE Alu 1 311 0 1522 162 42 11 chr20 33551484 33551749 -38602133 - AluJo SINE Alu -39 273 1 630 179 0 11 chr20 33551921 33552054 -38601828 + MIR SINE MIR 34 164 -44 302 279 67 78 chr20 33552287 33552331 -38601551 - MIR SINE MIR -68 194 151 2147 118 10 0 chr20 33552331 33552636 -38601246 + AluSx SINE Alu 1 308 -4 302 279 67 78 chr20 33552636 33552770 -38601112 - MIR SINE MIR -111 151 18 427 196 65 9 chr20 33552984 33553091 -38600791 + L2 LINE L2 3160 3272 0 211 243 14 27 chr20 33553132 33553206 -38600676 - MIR SINE MIR -65 143 81 2058 137 0 0 chr20 33553217 33553517 -38600365 - AluSq SINE Alu -13 300 1 246 310 95 35 chr20 33553741 33553857 -38600025 - MIR3 SINE MIR -37 171 49 * 331 337 69 29 chr20 33553830 33554106 -38599776 - L2 LINE L2 -404 2910 2624 1091 242 149 30 chr20 33554107 33554896 -38598986 + L2 LINE L2 2438 3310 -3 380 309 49 10 chr20 33554875 33555049 -38598833 - MIR SINE MIR -59 203 24 * 433 311 25 0 chr20 33555466 33555588 -38598294 + MIR SINE MIR 47 171 -91 259 299 84 79 chr20 33555667 33555745 -38598137 + L2 LINE L2 3030 3106 -166 1844 162 0 23 chr20 33555745 33556054 -38597828 - AluJb SINE Alu 0 312 11 259 299 84 79 chr20 33556054 33556189 -38597693 + L2 LINE L2 3106 3244 -28 211 254 28 42 chr20 33556323 33556394 -38597488 + MIR SINE MIR 93 162 -100 419 246 25 25 chr20 33556682 33556804 -38597078 - MIR3 SINE MIR -82 126 5 193 368 0 0 chr20 33557241 33557309 -38596573 - MIR SINE MIR -81 181 114 472 312 0 0 chr20 33557547 33557672 -38596210 + MIR SINE MIR 67 191 -71 950 295 153 33 chr20 33557719 33558440 -38595442 + L2 LINE L2 1666 2472 -842 351 364 66 63 chr20 33558456 33558882 -38595000 - HAL1 LINE L1 -1203 1304 878 619 109 43 57 chr20 33558882 33559233 -38594649 + (TCTCTG)n Simple_repeat Simple_repeat 1 346 0 544 323 111 13 chr20 33559244 33559924 -38593958 + L2 LINE L2 2471 3272 -41 257 331 33 46 chr20 33560044 33560349 -38593533 + L2 LINE L2 2569 2869 -445 204 265 92 41 chr20 33560507 33560605 -38593277 - L2 LINE L2 -33 3239 3137 409 273 298 11 chr20 33560607 33560889 -38592993 + L2 LINE L2 2951 3313 0 * 523 259 214 14 chr20 33560860 33561149 -38592733 - L2 LINE L2 -123 3190 2844 334 277 51 29 chr20 33561183 33561320 -38592562 - MIR3 SINE MIR -67 141 2 846 295 85 36 chr20 33561622 33562093 -38591789 + L2 LINE L2 2814 3307 -6 465 282 1 43 chr20 33562103 33562257 -38591625 - MIR3 SINE MIR -53 155 5 319 338 78 20 chr20 33563642 33563846 -38590036 - MIR SINE MIR -34 228 13 186 283 94 0 chr20 33563946 33563999 -38589883 - L2 LINE L2 -3 3269 3212 342 322 0 8 chr20 33564151 33564269 -38589613 - MIR SINE MIR -58 150 34 254 398 66 22 chr20 33564937 33565118 -38588764 + MIR3 SINE MIR 19 207 -1 1143 140 0 24 chr20 33565230 33565726 -38588156 + (TGGA)n Simple_repeat Simple_repeat 3 311 0 464 235 0 7 chr20 33565748 33565901 -38587981 + (TGGA)n Simple_repeat Simple_repeat 1 152 0 855 169 0 0 chr20 33565914 33566086 -38587796 + (TGGA)n Simple_repeat Simple_repeat 3 174 0 219 224 0 0 chr20 33566089 33566138 -38587744 + (GCTG)n Simple_repeat Simple_repeat 1 49 0 696 206 0 0 chr20 33566172 33566448 -38587434 + (TGGA)n Simple_repeat Simple_repeat 1 276 0 473 324 120 45 chr20 33566541 33567261 -38586621 + L2 LINE L2 2461 3260 -12 1426 133 0 129 chr20 33567300 33567528 -38586354 - AluJo SINE Alu -54 258 73 2179 120 0 3 chr20 33567528 33567828 -38586054 + AluSx SINE Alu 1 299 -13 1426 133 0 129 chr20 33567828 33567885 -38585997 - AluJo SINE Alu -239 73 10 239 284 15 0 chr20 33567892 33567959 -38585923 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 1797 174 3 0 chr20 33568072 33568376 -38585506 + AluJo SINE Alu 1 305 -7 206 293 28 57 chr20 33568612 33568718 -38585164 + L2 LINE L2 3171 3273 -40 529 279 57 13 chr20 33568751 33568909 -38584973 + L2 LINE L2 2644 2808 -506 891 157 63 0 chr20 33568911 33569102 -38584780 - MER20 DNA MER1_type 0 219 17 422 232 89 36 chr20 33569127 33569295 -38584587 + L2 LINE L2 3041 3217 -96 240 388 0 31 chr20 33569436 33569451 -38584431 - MIR3 SINE MIR -73 135 121 2136 106 0 0 chr20 33569451 33569759 -38584123 + AluSx SINE Alu 1 308 0 240 388 0 31 chr20 33569759 33569871 -38584011 - MIR3 SINE MIR -87 121 11 1813 157 0 28 chr20 33570219 33570538 -38583344 + AluJo SINE Alu 1 310 -2 248 252 58 58 chr20 33570924 33571027 -38582855 - MIR SINE MIR -74 134 32 286 226 0 16 chr20 33571037 33571099 -38582783 + MIR SINE MIR 86 146 -116 995 261 87 27 chr20 33571118 33571142 -38582740 - L2 LINE L2 -12 3301 3280 2261 84 3 3 chr20 33571142 33571441 -38582441 - AluSx SINE Alu -13 299 1 995 261 87 27 chr20 33571441 33571974 -38581908 - L2 LINE L2 -33 3280 2701 1483 219 3 16 chr20 33572019 33572158 -38581724 + AluJo SINE Alu 2 141 -171 2084 102 0 38 chr20 33572158 33572471 -38581411 + AluSx SINE Alu 1 301 -11 1483 219 3 16 chr20 33572471 33572641 -38581241 + AluJo SINE Alu 141 307 -5 307 390 21 7 chr20 33572653 33572794 -38581088 + L1MC4a LINE L1 5854 5996 -1812 229 240 83 0 chr20 33572824 33572920 -38580962 + L1MC4a LINE L1 6070 6173 -1635 208 154 0 26 chr20 33572934 33572973 -38580909 + A-rich Low_complexity Low_complexity 4 41 0 192 165 17 70 chr20 33573051 33573166 -38580716 + G-rich Low_complexity Low_complexity 5 113 0 264 246 0 70 chr20 33573170 33573312 -38580570 + (GGGTG)n Simple_repeat Simple_repeat 4 135 0 268 345 0 33 chr20 33573312 33573475 -38580407 - MIR SINE MIR -65 143 10 212 290 58 0 chr20 33573514 33573583 -38580299 + L2 LINE L2 3200 3272 0 948 237 173 36 chr20 33573597 33573871 -38580011 - L2 LINE L2 0 3313 3078 1577 151 44 7 chr20 33573871 33574143 -38579739 + AluJo SINE Alu 21 302 -10 948 237 173 36 chr20 33574143 33574399 -38579483 - L2 LINE L2 -235 3078 2694 294 301 72 12 chr20 33575122 33575238 -38578644 - MIR SINE MIR -45 163 47 913 114 0 29 chr20 33575238 33575378 -38578504 + AluJb SINE Alu 169 304 -8 386 248 101 8 chr20 33575385 33575514 -38578368 - L2 LINE L2 -315 2998 2858 927 142 12 12 chr20 33576248 33576410 -38577472 - AluSg/x SINE Alu -16 294 133 353 324 122 12 chr20 33576650 33576897 -38576985 + L2 LINE L2 2596 2869 -445 438 268 105 53 chr20 33576906 33577096 -38576786 + MIR SINE MIR 63 262 0 255 321 200 23 chr20 33577148 33577363 -38576519 + L2 LINE L2 2930 3182 -90 207 139 0 0 chr20 33577482 33577518 -38576364 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1701 148 8 0 chr20 33577611 33577867 -38576015 + AluJb SINE Alu 33 290 -22 181 339 0 0 chr20 33578262 33578321 -38575561 - MIR3 SINE MIR -15 193 135 303 283 67 0 chr20 33578367 33578492 -38575390 - MIR SINE MIR -21 241 109 316 258 21 21 chr20 33578590 33578687 -38575195 + MIR SINE MIR 70 166 -96 1820 112 33 4 chr20 33580370 33580646 -38573236 + AluSx SINE Alu 1 284 -28 495 0 0 0 chr20 33580646 33580701 -38573181 + (CA)n Simple_repeat Simple_repeat 2 56 0 225 172 0 86 chr20 33581251 33581309 -38572573 - MIR SINE MIR -65 143 91 257 127 16 111 chr20 33581581 33581644 -38572238 - MIR3 SINE MIR -36 172 116 214 307 11 34 chr20 33582135 33582223 -38571659 - MIR SINE MIR -79 183 98 302 283 62 21 chr20 33582536 33582681 -38571201 + L1MC4a LINE L1 5731 5881 -1927 1870 142 3 28 chr20 33582690 33583007 -38570875 + AluJb SINE Alu 1 309 -3 231 114 0 0 chr20 33583007 33583042 -38570840 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 2258 110 0 0 chr20 33583056 33583366 -38570516 + AluSx SINE Alu 3 312 0 274 267 57 29 chr20 33584577 33584682 -38569200 - L1MC4a LINE L1 -1915 5893 5786 213 340 106 0 chr20 33584727 33584821 -38569061 - MIR SINE MIR -41 221 118 2183 111 68 14 chr20 33584828 33585181 -38568701 - THE1C LTR MaLR -3 372 1 277 173 358 0 chr20 33585181 33585262 -38568620 + MER81 DNA DNA 5 114 0 314 192 313 0 chr20 33585614 33585713 -38568169 - MIR SINE MIR -108 154 25 183 312 150 40 chr20 33586219 33586392 -38567490 - L2 LINE L2 -183 3089 2898 252 270 27 27 chr20 33586810 33586921 -38566961 + L1ME4a LINE L1 5941 6051 -70 1913 144 20 0 chr20 33586933 33587231 -38566651 + AluSx SINE Alu 1 304 -8 2053 128 10 3 chr20 33587233 33587539 -38566343 + AluSg SINE Alu 1 308 -2 1325 122 25 0 chr20 33587549 33587746 -38566136 + AluJb SINE Alu 1 202 -110 619 182 27 0 chr20 33588828 33588938 -38564944 - MER81 DNA DNA 0 114 2 2010 127 6 19 chr20 33589143 33589459 -38564423 + AluSx SINE Alu 1 312 0 770 262 129 28 chr20 33589488 33589774 -38564108 + L2 LINE L2 2999 3313 0 517 229 6 6 chr20 33589870 33590049 -38563833 + (TG)n Simple_repeat Simple_repeat 2 180 0 615 234 129 0 chr20 33590225 33590396 -38563486 - MIR SINE MIR 0 262 70 283 177 32 0 chr20 33590444 33590506 -38563376 - MIR SINE MIR -63 145 82 224 319 236 5 chr20 33590913 33591104 -38562778 - MIR SINE MIR -16 246 12 394 251 194 26 chr20 33591389 33591513 -38562369 + MIR SINE MIR 21 123 -139 726 146 0 97 chr20 33591513 33591657 -38562225 + FLAM_A SINE Alu 4 133 0 394 251 194 26 chr20 33591657 33591723 -38562159 + MIR SINE MIR 123 243 -19 250 336 21 35 chr20 33591921 33592064 -38561818 - MIR SINE MIR -15 247 107 289 248 28 18 chr20 33592187 33592296 -38561586 + L1ME4a LINE L1 5975 6084 -37 * 3996 164 23 61 chr20 33592289 33592425 -38561457 - L1MB8 LINE L1 0 6178 6038 2040 118 6 16 chr20 33592425 33592738 -38561144 + AluSx SINE Alu 1 310 -2 3996 164 23 61 chr20 33592738 33593052 -38560830 - L1MB8 LINE L1 -140 6038 5714 1715 137 28 59 chr20 33593052 33593373 -38560509 + AluJo SINE Alu 1 311 -1 3996 164 23 61 chr20 33593373 33593841 -38560041 - L1MB8 LINE L1 -464 5714 5294 1961 137 13 22 chr20 33593841 33594156 -38559726 - AluJb SINE Alu 0 312 1 3996 164 23 61 chr20 33594156 33594185 -38559697 - L1MB8 LINE L1 -884 5294 5265 559 209 0 60 chr20 33594798 33594932 -38558950 + MIR SINE MIR 31 156 -106 725 259 21 16 chr20 33595201 33595390 -38558492 + MIR SINE MIR 27 216 -46 441 0 0 0 chr20 33595641 33595690 -38558192 + (CA)n Simple_repeat Simple_repeat 1 49 0 235 267 93 0 chr20 33595691 33595766 -38558116 - MER103 DNA DNA -81 85 4 2012 112 3 10 chr20 33596181 33596507 -38557375 + AluSx SINE Alu 1 312 0 182 243 0 0 chr20 33596820 33596857 -38557025 - L2 LINE L2 -17 3255 3219 237 257 128 46 chr20 33596884 33596993 -38556889 - MIR SINE MIR -109 153 36 209 247 99 12 chr20 33597777 33597858 -38556024 - MIR SINE MIR -145 117 30 283 349 0 72 chr20 33597873 33598025 -38555857 + MIR SINE MIR 2 142 -120 310 278 151 0 chr20 33598032 33598158 -38555724 + MIR SINE MIR 41 185 -77 1921 124 9 64 chr20 33598191 33598521 -38555361 - AluSx SINE Alu 0 312 1 2283 98 0 0 chr20 33599128 33599433 -38554449 + AluSq SINE Alu 1 305 -8 1758 168 0 3 chr20 33599442 33599733 -38554149 + AluJo SINE Alu 6 295 -17 226 244 81 23 chr20 33600096 33600182 -38553700 - MIR3 SINE MIR -107 101 11 257 297 196 0 chr20 33600218 33600437 -38553445 + L2 LINE L2 2885 3146 -167 2258 90 0 37 chr20 33600444 33600767 -38553115 - AluY SINE Alu 0 311 1 670 205 32 53 chr20 33600767 33600957 -38552925 - L1MD3 LINE L1 -6 7989 7804 1305 175 5 0 chr20 33601182 33601405 -38552477 + AluJb SINE Alu 85 308 -4 325 288 129 14 chr20 33601414 33601553 -38552329 - MIR SINE MIR -59 203 49 1359 180 12 50 chr20 33603069 33603392 -38550490 + AluJo SINE Alu 1 311 -1 406 321 6 30 chr20 33603496 33603664 -38550218 + MIR SINE MIR 63 226 -36 207 275 38 12 chr20 33603779 33603859 -38550023 - MIR SINE MIR -131 131 50 220 368 38 8 chr20 33603897 33604030 -38549852 - L2 LINE L2 -17 3296 3160 1899 124 25 45 chr20 33604050 33604364 -38549518 + AluSx SINE Alu 1 308 -4 357 301 113 0 chr20 33605179 33605312 -38548570 - MIR3 SINE MIR -12 196 49 4773 148 58 80 chr20 33605606 33605826 -38548056 + L1MB8 LINE L1 4018 4241 -1937 1871 145 38 0 chr20 33605826 33606116 -38547766 + AluSx SINE Alu 1 301 -11 4773 148 58 80 chr20 33606116 33606576 -38547306 + L1MB8 LINE L1 4241 4710 -1468 1908 165 0 3 chr20 33606576 33606879 -38547003 + AluJb SINE Alu 1 302 -10 4773 148 58 80 chr20 33606879 33607308 -38546574 + L1MB8 LINE L1 4710 5147 -1031 475 121 0 0 chr20 33607308 33607374 -38546508 + AluJ/FLAM SINE Alu 4 69 -243 4773 148 58 80 chr20 33607374 33607527 -38546355 + L1MB8 LINE L1 5147 5302 -876 2126 108 3 10 chr20 33607527 33607833 -38546049 + AluSx SINE Alu 1 304 -8 2464 145 68 2 chr20 33607839 33608238 -38545644 + MSTB LTR MaLR 2 426 0 4773 148 58 80 chr20 33608238 33608595 -38545287 + L1MB8 LINE L1 5307 5679 -499 1908 136 0 7 chr20 33608595 33608889 -38544993 + AluSx SINE Alu 1 292 -20 4773 148 58 80 chr20 33608889 33609080 -38544802 + L1MB8 LINE L1 5679 5873 -305 917 157 0 0 chr20 33609082 33609222 -38544660 + AluJo SINE Alu 1 140 -172 2014 119 0 0 chr20 33609223 33609534 -38544348 + AluSx SINE Alu 1 311 0 416 96 0 55 chr20 33609534 33609607 -38544275 + FLAM_C SINE Alu 73 141 -2 1974 141 0 25 chr20 33609693 33610013 -38543869 + AluSx SINE Alu 1 312 0 1072 79 7 0 chr20 33610071 33610211 -38543671 + AluSq/x SINE Alu 1 141 -172 1583 143 57 14 chr20 33610324 33610604 -38543278 - AluJo SINE Alu -16 296 5 2266 100 0 3 chr20 33610891 33611192 -38542690 - AluSp SINE Alu -13 300 1 395 373 0 6 chr20 33611411 33611572 -38542310 - MIR SINE MIR -15 247 88 266 277 76 3 chr20 33611682 33611803 -38542079 - MIR SINE MIR -61 147 7 203 169 0 51 chr20 33611862 33611921 -38541961 + (TAA)n Simple_repeat Simple_repeat 1 56 0 198 0 0 0 chr20 33611939 33611961 -38541921 + (CAT)n Simple_repeat Simple_repeat 1 22 0 352 286 163 0 chr20 33612510 33612657 -38541225 - MIR SINE MIR -19 243 73 2781 104 3 3 chr20 33612699 33613074 -38540808 - THE1C LTR MaLR 0 375 1 318 265 61 75 chr20 33613214 33613361 -38540521 - L2 LINE L2 -1 3271 3127 216 330 47 28 chr20 33613378 33613484 -38540398 - L2 LINE L2 -18 3295 3188 341 82 41 0 chr20 33614259 33614308 -38539574 + MER66A LTR ERV1 284 334 -144 1961 117 17 10 chr20 33614332 33614632 -38539250 + AluSq SINE Alu 1 302 -11 965 189 6 0 chr20 33614752 33614927 -38538955 + FRAM SINE Alu 1 176 0 2122 108 0 3 chr20 33614968 33615263 -38538619 - AluSg SINE Alu -16 294 1 735 230 120 27 chr20 33615373 33615673 -38538209 + L1ME4a LINE L1 5793 6120 -1 294 291 97 0 chr20 33616520 33616623 -38537259 - L3 LINE CR1 -604 973 861 228 191 0 143 chr20 33617605 33617689 -38536193 - Charlie5 DNA MER1_type 0 2624 2553 1638 114 103 0 chr20 33617699 33617972 -38535910 + AluSg SINE Alu 1 301 -9 1130 122 0 71 chr20 33617996 33618192 -38535690 + AluJb SINE Alu 131 312 0 1957 153 7 0 chr20 33618202 33618497 -38535385 + AluJb SINE Alu 1 297 -15 2240 106 0 0 chr20 33618499 33618801 -38535081 + AluY SINE Alu 3 304 -7 252 0 0 0 chr20 33618813 33618841 -38535041 + (TA)n Simple_repeat Simple_repeat 1 28 0 772 104 96 0 chr20 33618842 33618957 -38534925 - FLAM_C SINE Alu -10 133 8 817 192 127 5 chr20 33618964 33619169 -38534713 - MER33 DNA MER1_type -259 65 1 267 268 226 24 chr20 33619170 33619334 -38534548 - L2 LINE L2 -445 2869 2673 2044 116 3 0 chr20 33619691 33619984 -38533898 - AluY SINE Alu -17 294 1 577 316 58 5 chr20 33620003 33620209 -38533673 + MIR SINE MIR 2 218 -44 254 372 28 0 chr20 33620235 33620360 -38533522 - MIR SINE MIR -75 133 31 2341 91 0 0 chr20 33620363 33620671 -38533211 + AluSx SINE Alu 5 312 0 905 102 38 57 chr20 33620675 33620857 -38533025 + AluSg/x SINE Alu 127 305 0 312 280 61 23 chr20 33621100 33621232 -38532650 + MIR3 SINE MIR 1 137 -71 4159 143 39 61 chr20 33621592 33621935 -38531947 + L1MB1 LINE L1 4905 5254 -914 1962 96 7 33 chr20 33621935 33622236 -38531646 + AluSq SINE Alu 1 293 -20 2304 89 0 6 chr20 33622238 33622551 -38531331 + AluSx SINE Alu 1 311 -1 4159 143 39 61 chr20 33622551 33622567 -38531315 + L1MB1 LINE L1 5255 5270 -898 2073 123 27 0 chr20 33622567 33622868 -38531014 + AluSg SINE Alu 1 309 -1 4159 143 39 61 chr20 33622868 33623576 -38530306 + L1MB1 LINE L1 5270 5958 -210 2323 79 13 0 chr20 33623576 33623880 -38530002 + AluSp SINE Alu 1 308 -5 4159 143 39 61 chr20 33623880 33624051 -38529831 + L1MB1 LINE L1 5958 6131 -37 1835 98 3 78 chr20 33624051 33624380 -38529502 + AluSg SINE Alu 1 306 0 224 57 0 29 chr20 33624400 33624435 -38529447 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1035 177 0 0 chr20 33624438 33624602 -38529280 + FRAM SINE Alu 1 160 -16 226 287 33 74 chr20 33625724 33625846 -38528036 + L2 LINE L2 3155 3271 -1 879 108 0 43 chr20 33626091 33626230 -38527652 - FLAM_C SINE Alu 0 133 1 245 309 32 41 chr20 33626318 33626441 -38527441 + L1ME LINE L1 5541 5662 -459 1731 140 13 42 chr20 33626656 33626963 -38526919 - AluJb SINE Alu -14 298 1 333 0 0 0 chr20 33628140 33628177 -38525705 + (CA)n Simple_repeat Simple_repeat 2 38 0 250 146 0 21 chr20 33628473 33628521 -38525361 - L2 LINE L2 0 3313 3267 250 269 45 0 chr20 33628622 33628689 -38525193 - L2 LINE L2 -218 3054 2985 198 279 49 0 chr20 33628793 33628854 -38525028 - MIR SINE MIR -71 137 74 2376 93 0 7 chr20 33628955 33629257 -38524625 - AluSq SINE Alu -13 300 1 823 86 29 72 chr20 33630244 33630407 -38523475 + FLAM_C SINE Alu 1 157 0 2343 103 0 0 chr20 33630409 33630709 -38523173 + AluSq SINE Alu 1 300 -13 2353 100 0 3 chr20 33630711 33631011 -38522871 + AluSx SINE Alu 1 299 -13 314 275 148 22 chr20 33631202 33631384 -38522498 - MIR SINE MIR -45 217 13 211 333 0 0 chr20 33631878 33631947 -38521935 - MIR SINE MIR -103 105 37 186 282 141 86 chr20 33632115 33632165 -38521717 - MIR3 SINE MIR -7 201 155 1869 134 55 21 chr20 33632165 33632455 -38521427 + AluSg SINE Alu 1 300 -10 186 282 141 86 chr20 33632455 33632567 -38521315 - MIR3 SINE MIR -53 155 30 537 265 65 24 chr20 33632650 33632820 -38521062 + MIR SINE MIR 20 196 -66 226 258 90 11 chr20 33633027 33633116 -38520766 - L2 LINE L2 -260 3053 2958 2496 74 0 7 chr20 33634101 33634410 -38519472 + AluSg SINE Alu 1 307 -3 1136 152 0 0 chr20 33634450 33634615 -38519267 - AluJb SINE Alu -11 301 137 564 276 148 23 chr20 33634696 33634967 -38518915 + L2 LINE L2 2775 3011 -302 2030 125 46 0 chr20 33634967 33635248 -38518634 + AluSg SINE Alu 1 294 -16 564 276 148 23 chr20 33635248 33635261 -38518621 + L2 LINE L2 3011 3021 -292 423 0 0 0 chr20 33635261 33635308 -38518574 + (CA)n Simple_repeat Simple_repeat 2 48 0 564 276 148 23 chr20 33635308 33635497 -38518385 + L2 LINE L2 3021 3311 -2 2267 92 3 26 chr20 33635801 33636104 -38517778 - AluSx SINE Alu -16 296 1 307 236 92 92 chr20 33636292 33636351 -38517531 - MER5B DNA MER1_type -4 174 116 2401 80 0 7 chr20 33636351 33636650 -38517232 + AluSc SINE Alu 5 301 -8 307 236 92 92 chr20 33636650 33636764 -38517118 - MER5B DNA MER1_type -61 117 1 * 338 331 26 32 chr20 33636764 33636913 -38516969 - MER5B DNA MER1_type -18 160 13 1750 149 0 0 chr20 33636921 33637176 -38516706 + AluSx SINE Alu 54 308 -4 2355 75 4 0 chr20 33637232 33637548 -38516334 + AluSx SINE Alu 2 318 0 1098 118 7 13 chr20 33637548 33637753 -38516129 + AluSg/x SINE Alu 129 332 0 507 136 8 59 chr20 33637765 33637863 -38516019 + AluJb SINE Alu 189 290 -22 180 0 0 0 chr20 33637863 33637883 -38515999 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1892 174 3 0 chr20 33637893 33638204 -38515678 + AluJb SINE Alu 1 312 0 1917 173 3 6 chr20 33638217 33638529 -38515353 + AluJb SINE Alu 1 311 -1 281 245 165 42 chr20 33638809 33639021 -38514861 + L1MC5 LINE L1 7546 7783 -178 2690 43 0 0 chr20 33639025 33639325 -38514557 + AluY SINE Alu 1 300 -11 609 190 8 25 chr20 33639341 33639462 -38514420 + FLAM_A SINE Alu 2 120 -13 1671 144 100 0 chr20 33639551 33639822 -38514060 - AluY SINE Alu -13 298 1 1705 193 3 13 chr20 33639844 33640013 -38513869 - AluJo SINE Alu -9 303 137 2353 122 0 0 chr20 33640013 33640317 -38513565 - AluSx SINE Alu -8 304 1 1705 193 3 13 chr20 33640317 33640453 -38513429 - AluJo SINE Alu -175 137 1 1709 143 94 14 chr20 33640523 33640810 -38513072 + AluSg SINE Alu 1 310 0 2515 55 0 0 chr20 33640814 33641104 -38512778 + AluY SINE Alu 1 290 -21 2174 128 3 3 chr20 33641108 33641420 -38512462 + AluSx SINE Alu 1 312 0 363 260 115 0 chr20 33641495 33641599 -38512283 + MER103 DNA DNA 1 116 -50 2315 96 0 6 chr20 33642057 33642369 -38511513 + AluSq SINE Alu 1 310 -3 594 217 17 0 chr20 33642508 33642628 -38511254 + FLAM_A SINE Alu 1 122 -11 403 340 89 15 chr20 33642657 33642860 -38511022 - MIR SINE MIR -37 225 8 2444 92 0 0 chr20 33642906 33643211 -38510671 + AluSq SINE Alu 2 306 -7 1596 147 17 0 chr20 33643220 33643451 -38510431 + AluJo SINE Alu 1 235 -77 652 175 0 17 chr20 33643882 33644002 -38509880 + FLAM_C SINE Alu 1 118 -15 1898 121 0 62 chr20 33644020 33644156 -38509726 + AluSx SINE Alu 1 144 -158 2218 125 0 10 chr20 33644156 33644290 -38509592 + AluSx SINE Alu 2 136 -176 2120 108 0 54 chr20 33644290 33644604 -38509278 + AluSx SINE Alu 1 297 -15 2218 125 0 10 chr20 33644604 33644773 -38509109 + AluSx SINE Alu 136 302 -10 1898 121 0 62 chr20 33644773 33644958 -38508924 + AluSx SINE Alu 144 302 0 2201 103 17 0 chr20 33645136 33645428 -38508454 + AluSx SINE Alu 1 297 -15 2361 64 11 4 chr20 33645433 33645744 -38508138 + AluY SINE Alu 1 313 0 644 52 21 0 chr20 33645773 33645869 -38508013 + (TCTCCC)n Simple_repeat Simple_repeat 1 98 0 6802 59 18 42 chr20 33645869 33647661 -38506221 + SVA Other Other 57 1386 0 228 163 0 23 chr20 33647694 33647737 -38506145 - Alu SINE Alu -198 102 61 438 281 91 23 chr20 33647752 33648059 -38505823 + L1MC4a LINE L1 5689 6017 -104 2564 70 0 0 chr20 33648123 33648424 -38505458 - AluY SINE Alu -10 301 1 1919 151 0 39 chr20 33648477 33648782 -38505100 + AluSx SINE Alu 13 305 -7 2158 102 7 30 chr20 33648805 33649108 -38504774 + AluSg SINE Alu 1 296 -14 2245 128 0 3 chr20 33649118 33649423 -38504459 + AluSq SINE Alu 3 306 -7 1863 150 24 3 chr20 33649647 33649934 -38503948 + AluJo SINE Alu 3 295 -17 2103 118 38 0 chr20 33649963 33650250 -38503632 + AluSc SINE Alu 1 298 -11 406 105 132 0 chr20 33650251 33650327 -38503555 - MER5C DNA MER1_type -171 153 68 333 109 0 0 chr20 33651120 33651175 -38502707 + (CA)n Simple_repeat Simple_repeat 2 56 0 2006 146 19 7 chr20 33651253 33651561 -38502321 - AluJb SINE Alu 0 312 1 815 201 176 80 chr20 33651704 33651855 -38502027 + MLT1A2 LTR MaLR 1 136 -238 2315 117 3 0 chr20 33651855 33652164 -38501718 - AluSx SINE Alu -2 310 1 815 201 176 80 chr20 33652164 33652195 -38501687 + MLT1A2 LTR MaLR 136 163 -211 843 159 0 0 chr20 33652195 33652327 -38501555 + AluJo SINE Alu 1 132 -170 815 201 176 80 chr20 33652327 33652421 -38501461 + MLT1A2 LTR MaLR 163 247 -127 2125 133 0 26 chr20 33652421 33652729 -38501153 + AluSg SINE Alu 1 300 -10 815 201 176 80 chr20 33652729 33652774 -38501108 + MLT1A2 LTR MaLR 247 355 -19 248 133 133 0 chr20 33652781 33652826 -38501056 + MLT1A2 LTR MaLR 315 365 0 2326 98 0 0 chr20 33652969 33653281 -38500601 + AluSx SINE Alu 1 312 0 273 354 139 0 chr20 33653293 33653516 -38500366 + MIR SINE MIR 4 257 -5 965 188 0 0 chr20 33653735 33653748 -38500134 + AluJo SINE Alu 120 132 -180 1831 153 58 10 chr20 33653748 33654043 -38499839 + AluJo SINE Alu 3 311 -1 965 188 0 0 chr20 33654043 33654183 -38499699 + AluJo SINE Alu 131 273 -39 543 299 25 73 chr20 33654563 33654790 -38499092 + L1MC/D LINE L1 5373 5582 -2226 1713 172 0 27 chr20 33654790 33655087 -38498795 - AluJb SINE Alu -23 289 1 543 299 25 73 chr20 33655087 33655173 -38498709 + L1MC/D LINE L1 5582 5671 -2137 624 164 9 17 chr20 33655188 33655304 -38498578 + FLAM_C SINE Alu 8 122 -21 2333 77 0 32 chr20 33655341 33655651 -38498231 + AluY SINE Alu 1 300 -11 2018 103 81 0 chr20 33655651 33655923 -38497959 + AluSx SINE Alu 1 294 -18 2131 107 10 20 chr20 33655995 33656133 -38497749 + AluSx SINE Alu 1 139 -173 2381 87 10 3 chr20 33656133 33656432 -38497450 + AluSx SINE Alu 1 301 -11 2131 107 10 20 chr20 33656432 33656593 -38497289 + AluSx SINE Alu 139 297 -15 2161 99 10 20 chr20 33656593 33656895 -38496987 + AluY SINE Alu 1 299 -12 2386 82 0 0 chr20 33656895 33657187 -38496695 + AluSg1 SINE Alu 7 298 -11 407 222 0 11 chr20 33657252 33657342 -38496540 + AluJo/FLAM SINE Alu 44 132 -180 2104 140 13 0 chr20 33657342 33657649 -38496233 + AluSx SINE Alu 1 311 -1 2035 118 24 3 chr20 33657654 33657941 -38495941 + AluSx SINE Alu 3 295 -17 2123 131 3 0 chr20 33658015 33658313 -38495569 - AluSx SINE Alu -13 299 1 599 162 104 52 chr20 33658358 33658512 -38495370 - FRAM SINE Alu -20 156 1 2187 115 0 3 chr20 33659085 33659403 -38494479 + AluY SINE Alu 1 311 0 1327 173 24 109 chr20 33659457 33659595 -38494287 + AluYb8 SINE Alu 3 151 -167 2287 101 0 7 chr20 33659595 33659891 -38493991 + AluY SINE Alu 1 294 -17 1327 173 24 109 chr20 33659891 33660081 -38493801 + AluYb8 SINE Alu 151 303 -15 851 149 156 19 chr20 33660081 33660235 -38493647 + AluJb SINE Alu 137 311 -1 1745 182 0 29 chr20 33660245 33660552 -38493330 + AluJo SINE Alu 3 300 -12 1731 176 3 26 chr20 33660822 33661003 -38492879 - AluJo SINE Alu -12 300 127 2058 138 14 0 chr20 33661003 33661292 -38492590 + AluSg SINE Alu 1 293 -17 1731 176 3 26 chr20 33661292 33661417 -38492465 - AluJo SINE Alu -185 127 1 1298 179 13 4 chr20 33661427 33661656 -38492226 - AluJo SINE Alu -10 302 72 431 257 181 7 chr20 33661657 33661801 -38492081 + MIR SINE MIR 81 249 -13 279 200 0 0 chr20 33661823 33661878 -38492004 + MIR SINE MIR 100 154 -108 619 205 33 0 chr20 33661882 33662004 -38491878 + AluSq/x SINE Alu 2 127 -186 2398 97 0 0 chr20 33662060 33662370 -38491512 + AluY SINE Alu 1 310 -1 378 159 154 93 chr20 33662390 33662432 -38491450 + MER33 DNA MER1_type 16 54 -2531 1873 156 7 14 chr20 33662432 33662727 -38491155 + AluSx SINE Alu 1 293 -19 2414 88 0 0 chr20 33662732 33663028 -38490854 + AluY SINE Alu 1 296 -15 378 159 154 93 chr20 33663028 33663161 -38490721 + MER33 DNA MER1_type 57 208 -116 464 240 0 10 chr20 33663167 33663263 -38490619 + Tigger3(Golem) DNA MER2_type 18 112 -2917 1311 137 113 14 chr20 33663313 33663525 -38490357 + AluJo SINE Alu 67 299 -13 2247 121 3 0 chr20 33663557 33663862 -38490020 + AluSx SINE Alu 1 306 -6 939 169 0 29 chr20 33663908 33664080 -38489802 - FAM SINE Alu -8 167 1 2165 122 10 3 chr20 33664087 33664381 -38489501 - AluSc SINE Alu -13 296 1 1207 129 83 0 chr20 33664382 33664599 -38489283 + Tigger3(Golem) DNA MER2_type 2740 2974 -55 2321 99 3 0 chr20 33664601 33664894 -38488988 + AluSx SINE Alu 1 294 -18 304 180 56 0 chr20 33664894 33664983 -38488899 + MER33 DNA MER1_type 227 320 -4 26 30 0 0 chr20 33665968 33666001 -38487881 + GC_rich Low_complexity Low_complexity 1 33 0 256 276 38 0 chr20 33666112 33666217 -38487665 + (CCG)n Simple_repeat Simple_repeat 3 111 0 23 68 0 0 chr20 33666280 33666324 -38487558 + GC_rich Low_complexity Low_complexity 1 44 0 347 296 136 23 chr20 33666344 33666520 -38487362 + MIR SINE MIR 67 262 0 226 275 147 9 chr20 33666538 33666647 -38487235 - L2 LINE L2 -4 3309 3186 458 242 76 15 chr20 33666649 33666781 -38487101 - MER5A DNA MER1_type -3 186 47 2439 71 14 0 chr20 33667243 33667539 -38486343 + AluSp SINE Alu 1 300 -13 953 152 7 0 chr20 33667612 33667763 -38486119 + AluJb SINE Alu 147 298 -14 2036 140 0 16 chr20 33668039 33668209 -38485673 - AluSx SINE Alu -10 302 138 2412 76 10 0 chr20 33668209 33668513 -38485369 - AluSp SINE Alu -6 307 1 2036 140 0 16 chr20 33668513 33668649 -38485233 - AluSx SINE Alu -174 138 1 25 0 0 0 chr20 33668652 33668677 -38485205 + AT_rich Low_complexity Low_complexity 1 25 0 2156 125 3 31 chr20 33668699 33669020 -38484862 + AluSx SINE Alu 1 312 0 2604 44 0 0 chr20 33669314 33669610 -38484272 - AluY SINE Alu -15 296 1 388 319 6 60 chr20 33669719 33669789 -38484093 + MER5A DNA MER1_type 9 81 -108 2402 93 0 3 chr20 33669789 33670099 -38483783 + AluSc SINE Alu 1 309 0 388 319 6 60 chr20 33670099 33670120 -38483762 + MER5A DNA MER1_type 81 102 -87 1970 142 0 0 chr20 33670120 33670401 -38483481 + AluSx SINE Alu 28 308 -4 388 319 6 60 chr20 33670401 33670490 -38483392 + MER5A DNA MER1_type 102 180 -9 188 286 36 0 chr20 33670496 33670552 -38483330 - MIR SINE MIR 0 262 205 555 290 67 21 chr20 33670708 33670901 -38482981 + MIR SINE MIR 61 262 0 317 232 30 20 chr20 33670905 33671004 -38482878 - L1ME LINE L1 -386 5735 5636 2534 81 0 3 chr20 33671113 33671422 -38482460 + AluSp SINE Alu 1 308 -5 2447 109 0 0 chr20 33671453 33671766 -38482116 + AluSq SINE Alu 1 313 0 2263 126 0 0 chr20 33671772 33672081 -38481801 + AluSg SINE Alu 1 309 -1 746 96 0 8 chr20 33672081 33672200 -38481682 + L1MA4A LINE L1 6176 6293 -10 1022 157 66 0 chr20 33672982 33673180 -38480702 - L1MD1 LINE L1 0 6242 6032 2396 98 0 0 chr20 33673274 33673579 -38480303 + AluSq SINE Alu 1 305 -8 323 242 115 51 chr20 33673597 33673754 -38480128 + L1MC4 LINE L1 7537 7703 -339 341 140 0 0 chr20 33673757 33673814 -38480068 + L1MB2 LINE L1 6076 6132 -39 487 229 37 0 chr20 33673822 33673931 -38479951 + FLAM_A SINE Alu 21 133 -9 617 187 134 11 chr20 33673978 33674165 -38479717 + L1MC4 LINE L1 7694 7903 -139 510 307 0 29 chr20 33674809 33674946 -38478936 - L2 LINE L2 -1 3312 3180 185 271 0 34 chr20 33675365 33675424 -38478458 - L2 LINE L2 -818 2496 2440 359 306 9 0 chr20 33675445 33675553 -38478329 - MIR SINE MIR -62 146 38 2364 112 0 0 chr20 33675775 33676087 -38477795 + AluSx SINE Alu 1 312 0 760 163 23 0 chr20 33676483 33676612 -38477270 - FLAM_C SINE Alu 0 133 2 244 320 20 27 chr20 33676731 33676881 -38477001 + L2 LINE L2 2829 2977 -336 1198 123 12 0 chr20 33676941 33677112 -38476770 - AluSg/x SINE Alu -4 308 136 1949 98 16 0 chr20 33677114 33677368 -38476514 - AluSx SINE Alu -17 295 38 2345 103 3 0 chr20 33677473 33677775 -38476107 + AluSg SINE Alu 1 303 -7 296 250 125 39 chr20 33677819 33677947 -38475935 + L2 LINE L2 3134 3272 0 2246 117 3 0 chr20 33677958 33678257 -38475625 + AluSp SINE Alu 1 300 -13 440 284 21 21 chr20 33678362 33678503 -38475379 + MIR SINE MIR 112 252 -10 1826 101 89 4 chr20 33678536 33678794 -38475088 + AluSg SINE Alu 1 315 0 295 29 0 0 chr20 33678794 33678829 -38475053 + (TAA)n Simple_repeat Simple_repeat 2 180 0 185 338 0 42 chr20 33679039 33679110 -38474772 - MIR SINE MIR -56 206 139 402 232 52 97 chr20 33679149 33679304 -38474578 + MIR3 SINE MIR 13 160 -48 2210 92 0 17 chr20 33679467 33679762 -38474120 + AluSc SINE Alu 1 290 -19 512 231 45 26 chr20 33679785 33679907 -38473975 - MIR SINE MIR -5 257 130 1871 138 0 14 chr20 33679907 33680190 -38473692 + AluSx SINE Alu 34 312 0 512 231 45 26 chr20 33680190 33680223 -38473659 - MIR SINE MIR -132 130 99 259 275 0 0 chr20 33680233 33680302 -38473580 - MIR SINE MIR 0 262 194 732 177 0 8 chr20 33680461 33680591 -38473291 - FLAM_C SINE Alu -4 129 1 596 262 20 36 chr20 33680612 33680802 -38473080 - L1MC4 LINE L1 0 8042 7855 1790 157 23 17 chr20 33680802 33681102 -38472780 - AluJb SINE Alu -10 302 1 596 262 20 36 chr20 33681102 33681159 -38472723 - L1MC4 LINE L1 -187 7855 7799 2385 66 0 30 chr20 33681273 33681575 -38472307 - AluY SINE Alu -18 293 1 212 278 53 60 chr20 33681639 33681772 -38472110 + MIR SINE MIR 74 205 -57 1941 118 27 0 chr20 33681815 33681916 -38471966 + AluSg SINE Alu 21 118 -192 207 0 0 0 chr20 33681916 33681939 -38471943 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1941 118 27 0 chr20 33681939 33682100 -38471782 + AluSg SINE Alu 118 290 -20 2465 74 0 3 chr20 33682120 33682418 -38471464 + AluY SINE Alu 1 297 -14 2401 91 0 3 chr20 33682713 33683022 -38470860 - AluSg SINE Alu -2 308 1 2103 94 22 4 chr20 33683071 33683387 -38470495 + AluSx SINE Alu 1 321 0 606 330 156 13 chr20 33683748 33683846 -38470036 - L2 LINE L2 -3 3310 3227 450 0 0 0 chr20 33683846 33683896 -38469986 + (TG)n Simple_repeat Simple_repeat 2 51 0 606 330 156 13 chr20 33683896 33684253 -38469629 - L2 LINE L2 -86 3227 2785 235 81 0 0 chr20 33684256 33684293 -38469589 - L2 LINE L2 0 3313 3277 189 74 0 0 chr20 33684517 33684544 -38469338 + (TCCCC)n Simple_repeat Simple_repeat 4 30 0 21 57 0 0 chr20 33684954 33684989 -38468893 + GC_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr20 33685001 33685033 -38468849 + GC_rich Low_complexity Low_complexity 1 32 0 199 231 0 0 chr20 33686751 33686790 -38467092 + MIR SINE MIR 224 262 0 266 227 113 10 chr20 33686880 33686977 -38466905 + MIR SINE MIR 96 202 -60 2267 118 10 0 chr20 33688110 33688415 -38465467 - AluSx SINE Alu -4 308 1 2541 67 0 6 chr20 33688419 33688752 -38465130 - AluY SINE Alu 0 331 1 1707 157 15 0 chr20 33688764 33689038 -38464844 + AluSx SINE Alu 5 282 -30 654 225 8 0 chr20 33689075 33689204 -38464678 - FLAM_C SINE Alu -3 130 1 1583 162 64 0 chr20 33689275 33689569 -38464313 - AluJb SINE Alu 0 315 5 2131 108 13 29 chr20 33689577 33689891 -38463991 - AluSp SINE Alu -4 309 1 1766 153 16 26 chr20 33690121 33690429 -38463453 - AluJo SINE Alu -7 305 1 1575 141 65 30 chr20 33690741 33690882 -38463000 - AluJo SINE Alu -40 272 137 2308 98 13 0 chr20 33690882 33691187 -38462695 - AluSp SINE Alu -4 309 1 1575 141 65 30 chr20 33691187 33691308 -38462574 - AluJo SINE Alu -175 137 1 2496 54 0 10 chr20 33691784 33692082 -38461800 - AluY SINE Alu -16 295 1 399 145 0 0 chr20 33692385 33692447 -38461435 - L1ME1 LINE L1 -200 5966 5905 577 163 10 0 chr20 33692447 33692545 -38461337 - AluSg/x SINE Alu -16 293 195 352 287 10 0 chr20 33692546 33692647 -38461235 - L1ME1 LINE L1 -251 5915 5814 459 201 121 60 chr20 33692660 33692809 -38461073 - FRAM SINE Alu -24 152 1 1744 156 14 34 chr20 33692818 33692975 -38460907 - AluJo SINE Alu -22 290 131 2167 104 0 61 chr20 33692975 33693302 -38460580 - AluSp SINE Alu -6 307 1 2397 93 10 0 chr20 33693306 33693607 -38460275 - AluSp SINE Alu -9 304 1 1744 156 14 34 chr20 33693607 33693739 -38460143 - AluJo SINE Alu -184 128 2 2245 102 24 7 chr20 33694054 33694349 -38459533 + AluSx SINE Alu 1 300 -12 501 45 0 0 chr20 33695570 33695636 -38458246 - AluSp SINE Alu -12 301 236 1413 67 11 6 chr20 33695636 33695814 -38458068 - AluSp SINE Alu -134 179 1 1007 114 66 36 chr20 33695814 33695979 -38457903 - AluSg/x SINE Alu -18 294 125 1276 196 19 79 chr20 33696308 33696625 -38457257 - AluJo SINE Alu -13 299 2 234 0 0 0 chr20 33696630 33696656 -38457226 + (T)n Simple_repeat Simple_repeat 1 26 0 2467 80 0 0 chr20 33696904 33697204 -38456678 - AluY SINE Alu -11 300 1 663 256 6 6 chr20 33697211 33697387 -38456495 - L1PB4 LINE L1 0 6156 5981 234 0 0 0 chr20 33697389 33697415 -38456467 + (TCTTG)n Simple_repeat Simple_repeat 2 27 0 2163 99 7 17 chr20 33697415 33697717 -38456165 - AluSq SINE Alu -14 299 1 1092 96 0 0 chr20 33697717 33697853 -38456029 - AluSq/x SINE Alu -176 136 1 2255 86 52 0 chr20 33698653 33698943 -38454939 + AluSx SINE Alu 1 305 -7 463 194 134 15 chr20 33699299 33699433 -38454449 + MIR SINE MIR 110 259 -3 2200 76 3 92 chr20 33700752 33701080 -38452802 + AluSc SINE Alu 1 299 -10 1191 170 117 5 chr20 33701411 33701634 -38452248 + AluJo SINE Alu 38 285 -27 366 80 0 0 chr20 33701634 33701684 -38452198 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 198 265 84 36 chr20 33702005 33702088 -38451794 + MIR SINE MIR 54 140 -122 345 308 75 0 chr20 33703618 33703738 -38450144 + MER3 DNA MER1_type 3 131 -78 5543 143 50 19 chr20 33704303 33705280 -38448602 + Tigger7 DNA MER2_type 3 1009 -1478 1359 115 74 4 chr20 33705278 33705522 -38448360 + Tigger7 DNA MER2_type 2227 2487 0 * 2018 135 20 13 chr20 33705619 33705922 -38447960 - AluSx SINE Alu -7 305 1 2017 113 19 56 chr20 33706411 33706596 -38447286 - AluSx SINE Alu -3 309 139 2101 117 0 20 chr20 33706596 33706895 -38446987 - AluSq SINE Alu -3 310 18 2017 113 19 56 chr20 33706895 33707029 -38446853 - AluSx SINE Alu -173 139 2 193 185 93 0 chr20 33707062 33707116 -38446766 - MIR SINE MIR -93 169 111 2198 129 0 10 chr20 33707725 33708035 -38445847 - AluSx SINE Alu -5 307 1 2094 149 0 13 chr20 33708567 33708883 -38444999 - AluSx SINE Alu 0 312 1 3129 66 2 49 chr20 33710434 33710904 -38442978 - LTR7 LTR ERV1 -2 448 1 231 157 0 59 chr20 33711160 33711211 -38442671 - Alu SINE Alu -168 134 87 1412 161 0 9 chr20 33711211 33711434 -38442448 - AluJo SINE Alu -91 221 1 2126 99 7 3 chr20 33712305 33712587 -38441295 - AluSx SINE Alu -29 283 1 1511 196 35 0 chr20 33713372 33713657 -38440225 - AluJo SINE Alu -17 295 1 1533 150 105 8 chr20 33715907 33716174 -38437708 + AluSx SINE Alu 1 293 -19 301 152 0 0 chr20 33716734 33716780 -38437102 + AluJb SINE Alu 2 47 -261 1522 165 64 4 chr20 33716800 33717067 -38436815 + AluJb SINE Alu 29 311 -1 410 209 65 78 chr20 33717074 33717095 -38436787 - MER33 DNA MER1_type -2329 295 275 1704 128 70 4 chr20 33717095 33717353 -38436529 + AluSq SINE Alu 1 275 -38 410 209 65 78 chr20 33717353 33717561 -38436321 - MER33 DNA MER1_type -2349 275 69 1275 221 35 18 chr20 33720202 33720355 -38433527 - AluJo SINE Alu -22 290 128 2044 127 0 51 chr20 33720355 33720671 -38433211 - AluSx SINE Alu -12 300 1 1275 221 35 18 chr20 33720671 33720802 -38433080 - AluJo SINE Alu -184 128 1 1977 158 7 0 chr20 33722213 33722511 -38431371 - AluSx SINE Alu -10 302 3 1734 120 28 12 chr20 33723200 33723450 -38430432 - AluSq SINE Alu -59 254 1 1749 162 21 21 chr20 33724290 33724580 -38429302 - AluJo SINE Alu -22 290 1 454 169 0 0 chr20 33724736 33724807 -38429075 + AluJ/FLAM SINE Alu 3 73 -239 977 83 0 0 chr20 33725413 33725546 -38428336 + FLAM_C SINE Alu 1 133 0 217 270 101 22 chr20 33726778 33726867 -38427015 - L2 LINE L2 -752 2562 2467 806 143 41 41 chr20 33727380 33727527 -38426355 - FRAM SINE Alu -5 171 25 355 275 80 14 chr20 33727649 33727787 -38426095 - MIR3 SINE MIR -48 160 14 347 318 132 5 chr20 33729461 33729681 -38424201 - L1M4 LINE L1 -3009 3137 2890 191 306 0 32 chr20 33730193 33730255 -38423627 - L2 LINE L2 0 3272 3213 553 158 119 0 chr20 33732233 33732334 -38421548 + AluJb SINE Alu 13 125 -187 1919 94 59 7 chr20 33732349 33732636 -38421246 + AluY SINE Alu 1 302 -9 244 257 14 0 chr20 33732640 33732710 -38421172 - MER5A DNA MER1_type -21 168 98 607 193 9 0 chr20 33732739 33732848 -38421034 - AluJb SINE Alu -66 246 137 1321 127 0 23 chr20 33734167 33734388 -38419494 + AluSg/x SINE Alu 81 296 -16 316 200 160 30 chr20 33734392 33734492 -38419390 + MIR SINE MIR 136 248 -14 1422 156 17 35 chr20 33734619 33734907 -38418975 + AluJb SINE Alu 1 283 -29 412 296 174 6 chr20 33735069 33735241 -38418641 + MIR SINE MIR 50 250 -12 247 302 102 20 chr20 33735293 33735444 -38418438 - MIR SINE MIR -69 139 11 254 246 0 15 chr20 33735517 33735582 -38418300 + CT-rich Low_complexity Low_complexity 3 66 0 2256 62 3 7 chr20 33735600 33735892 -38417990 - AluY SINE Alu -20 291 1 2442 50 3 0 chr20 33735949 33736247 -38417635 + AluY SINE Alu 2 300 -11 944 169 30 0 chr20 33736264 33736430 -38417452 + AluJo SINE Alu 120 290 -22 618 187 8 15 chr20 33736444 33736578 -38417304 - L1MC4 LINE L1 -14 8028 7896 1732 101 0 0 chr20 33736578 33736815 -38417067 - AluSq SINE Alu -76 237 1 1054 67 0 8 chr20 33736819 33736953 -38416929 - AluSp SINE Alu -180 133 1 321 239 223 23 chr20 33737131 33737261 -38416621 + L2 LINE L2 2927 3082 -190 2099 125 3 0 chr20 33737302 33737606 -38416276 + AluSq SINE Alu 1 305 -8 1957 134 10 7 chr20 33737608 33737915 -38415967 + AluSx SINE Alu 1 308 -4 1305 157 139 8 chr20 33737957 33738224 -38415658 - AluJb SINE Alu 0 302 1 205 303 144 15 chr20 33738687 33738739 -38415143 + L2 LINE L2 2742 2786 -528 2116 88 0 33 chr20 33738739 33739044 -38414838 - AluSx SINE Alu -17 295 1 205 303 144 15 chr20 33739044 33739123 -38414759 + L2 LINE L2 2786 2890 -424 285 222 56 0 chr20 33739193 33739265 -38414617 - MIR SINE MIR -11 251 176 2037 93 0 0 chr20 33739348 33739616 -38414266 + AluSg SINE Alu 1 268 -42 24 32 0 0 chr20 33739630 33739661 -38414221 + AT_rich Low_complexity Low_complexity 1 31 0 2108 123 0 0 chr20 33739810 33740120 -38413762 - AluSg SINE Alu 0 310 1 2198 105 0 0 chr20 33740148 33740444 -38413438 - AluSg SINE Alu -14 296 1 929 156 0 6 chr20 33740865 33741025 -38412857 - FRAM SINE Alu -11 165 7 244 258 0 17 chr20 33741140 33741206 -38412676 + MIR SINE MIR 86 151 -57 1712 100 0 0 chr20 33741233 33741462 -38412420 - AluSq SINE Alu -84 229 1 909 106 8 0 chr20 33741501 33741633 -38412249 + FLAM_C SINE Alu 1 133 0 2283 87 0 0 chr20 33741831 33742130 -38411752 - AluSx SINE Alu -13 299 1 896 87 0 51 chr20 33742220 33742358 -38411524 + FLAM_C SINE Alu 3 133 0 21 0 0 0 chr20 33742629 33742650 -38411232 + GC_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr20 33742736 33742772 -38411110 + GC_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 33742875 33742910 -38410972 + GC_rich Low_complexity Low_complexity 1 35 0 442 271 132 0 chr20 33743103 33743247 -38410635 + MIR SINE MIR 4 166 -96 268 344 78 23 chr20 33743296 33743424 -38410458 - L2 LINE L2 -2 3311 3177 422 303 142 32 chr20 33743624 33743708 -38410174 - MIR SINE MIR -18 244 171 2072 93 26 3 chr20 33743708 33744010 -38409872 - AluSx SINE Alu -2 310 2 422 303 142 32 chr20 33744010 33744143 -38409739 - MIR SINE MIR -91 171 3 471 231 77 21 chr20 33744244 33744387 -38409495 - MIR SINE MIR -31 231 81 306 312 156 14 chr20 33745041 33745182 -38408700 - L2 LINE L2 -565 2749 2589 192 315 74 0 chr20 33745193 33745247 -38408635 - L2 LINE L2 -46 3267 3210 427 310 86 11 chr20 33745287 33745461 -38408421 - MIR SINE MIR -48 214 28 222 320 30 30 chr20 33745757 33745857 -38408025 - L2 LINE L2 -15 3257 3158 * 286 280 131 0 chr20 33745824 33745931 -38407951 + MIR3 SINE MIR 88 208 0 253 214 57 132 chr20 33746208 33746324 -38407558 + L2 LINE L2 2640 2742 -572 1428 170 74 0 chr20 33746324 33746594 -38407288 + AluJb SINE Alu 3 292 -20 253 214 57 132 chr20 33746594 33746636 -38407246 + L2 LINE L2 2742 2786 -528 558 286 228 19 chr20 33746638 33746963 -38406919 + L2 LINE L2 2919 3311 -2 194 147 35 48 chr20 33747103 33747161 -38406721 + MIR SINE MIR 92 191 -61 582 195 127 0 chr20 33747377 33747495 -38406387 - FLAM_C SINE Alu 0 133 1 2250 104 7 0 chr20 33747565 33747873 -38406009 + AluSx SINE Alu 1 310 -2 2046 94 22 4 chr20 33748208 33748515 -38405367 + AluSx SINE Alu 1 312 0 2290 66 7 13 chr20 33748910 33749215 -38404667 - AluY SINE Alu -8 303 1 1951 115 41 7 chr20 33749215 33749510 -38404372 - AluSx SINE Alu -5 307 3 2178 88 0 7 chr20 33749824 33750118 -38403764 + AluSq SINE Alu 6 297 -16 2232 82 3 3 chr20 33750310 33750604 -38403278 + AluSg SINE Alu 1 294 -16 228 228 222 4 chr20 33751170 33751282 -38402600 + MIR SINE MIR 3 146 -62 198 98 0 146 chr20 33751398 33751439 -38402443 - MIR SINE MIR -115 147 113 1887 81 88 0 chr20 33751632 33751905 -38401977 - AluSg SINE Alu -11 299 3 2162 49 46 3 chr20 33753435 33753719 -38400163 - AluY SINE Alu -15 296 1 874 167 8 0 chr20 33753858 33753990 -38399892 + FLAM_C SINE Alu 1 133 0 2053 114 0 19 chr20 33754222 33754530 -38399352 - AluSx SINE Alu -10 302 1 1863 136 20 3 chr20 33755162 33755457 -38398425 - AluJb SINE Alu -12 300 1 216 0 0 0 chr20 33755503 33755527 -38398355 + (T)n Simple_repeat Simple_repeat 1 24 0 818 114 0 0 chr20 33755547 33755661 -38398221 + AluSc SINE Alu 189 302 -7 1047 139 21 16 chr20 33755727 33755914 -38397968 + AluJb SINE Alu 114 301 -11 401 113 16 16 chr20 33756934 33756996 -38396886 + AluJ/FLAM SINE Alu 1 62 -240 370 240 113 98 chr20 33757455 33757659 -38396223 - L1MC5 LINE L1 -32 7929 7723 919 184 0 0 chr20 33757773 33757936 -38395946 + FRAM SINE Alu 1 162 -14 436 211 117 16 chr20 33758048 33758176 -38395706 - FLAM_A SINE Alu -1 141 1 2397 90 0 0 chr20 33758291 33758601 -38395281 - AluSx SINE Alu -2 310 1 1492 170 57 7 chr20 33758658 33758941 -38394941 - AluSg SINE Alu -13 297 1 386 263 143 23 chr20 33759655 33759830 -38394052 + MIR SINE MIR 9 204 -58 2827 173 37 74 chr20 33760337 33760497 -38393385 - L1MB8 LINE L1 0 6178 6014 2047 119 3 3 chr20 33760497 33760799 -38393083 + AluSx SINE Alu 2 303 -9 2827 173 37 74 chr20 33760799 33761368 -38392514 - L1MB8 LINE L1 -164 6014 5476 30 45 0 0 chr20 33763158 33763202 -38390680 + AT_rich Low_complexity Low_complexity 1 44 0 789 154 0 0 chr20 33763202 33763319 -38390563 - FLAM_C SINE Alu -15 118 2 2275 88 7 0 chr20 33763503 33763809 -38390073 - AluSx SINE Alu -4 308 1 1875 56 4 4 chr20 33764166 33764400 -38389482 - L1PA3 LINE L1 -5 6150 5917 273 319 157 6 chr20 33764448 33764614 -38389268 + MIR SINE MIR 65 255 -7 2109 92 0 0 chr20 33764760 33765080 -38388802 - AluY SINE Alu 0 320 1 341 230 435 6 chr20 33765080 33765241 -38388641 - MIR SINE MIR -4 258 29 234 0 0 0 chr20 33765829 33765855 -38388027 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1021 213 53 38 chr20 33766134 33766453 -38387429 - MER33 DNA MER1_type 0 324 1 2105 128 0 0 chr20 33766545 33766849 -38387033 - AluSx SINE Alu -8 304 1 279 0 0 0 chr20 33767135 33767166 -38386716 + (T)n Simple_repeat Simple_repeat 1 31 0 1861 83 4 0 chr20 33767166 33767407 -38386475 - AluSc SINE Alu -67 242 1 426 65 0 0 chr20 33767685 33767747 -38386135 + (TATG)n Simple_repeat Simple_repeat 1 62 0 1469 205 3 3 chr20 33767753 33768036 -38385846 - AluJo SINE Alu -29 283 1 575 231 39 15 chr20 33768342 33768472 -38385410 - FLAM_A SINE Alu 0 133 1 260 288 0 0 chr20 33768474 33768540 -38385342 + MIR3 SINE MIR 118 183 -25 1386 157 63 24 chr20 33770741 33771028 -38382854 - AluJo SINE Alu -14 298 1 455 200 160 0 chr20 33771044 33771169 -38382713 - L1MA10 LINE L1 -7 6327 6183 24 0 0 0 chr20 33772639 33772663 -38381219 + AT_rich Low_complexity Low_complexity 1 24 0 2294 93 0 7 chr20 33773236 33773546 -38380336 - AluSg1 SINE Alu -1 308 1 1934 148 0 0 chr20 33773779 33774082 -38379800 - AluJo SINE Alu -9 303 1 242 259 152 45 chr20 33774652 33774764 -38379118 - MER5A DNA MER1_type -3 186 63 203 259 103 86 chr20 33774854 33774970 -38378912 + MIR SINE MIR 80 197 -65 1964 141 7 0 chr20 33775651 33775956 -38377926 - AluSx SINE Alu -5 307 1 1427 166 40 30 chr20 33776193 33776364 -38377518 - AluJo SINE Alu -8 304 127 2371 82 0 0 chr20 33776364 33776669 -38377213 - AluSq SINE Alu -8 305 1 1427 166 40 30 chr20 33776669 33776798 -38377084 - AluJo SINE Alu -185 127 1 822 139 0 31 chr20 33777251 33777380 -38376502 + FLAM_C SINE Alu 2 126 -17 310 267 47 12 chr20 33777382 33777468 -38376414 + L1MC4 LINE L1 6621 6709 -1333 302 191 59 29 chr20 33777407 33777475 -38376407 - L1MCa LINE L1 -4362 2064 1995 * 788 156 0 15 chr20 33778793 33778928 -38374954 - FLAM_C SINE Alu 0 133 1 1300 145 94 0 chr20 33779048 33779282 -38374600 - AluJb SINE Alu -2 310 55 189 0 0 0 chr20 33779305 33779326 -38374556 + (T)n Simple_repeat Simple_repeat 1 21 0 2156 109 0 3 chr20 33779374 33779677 -38374205 - AluSg SINE Alu -8 302 1 933 119 0 15 chr20 33780265 33780399 -38373483 - FLAM_C SINE Alu 0 133 2 1898 211 107 26 chr20 33782274 33782718 -38371164 - L1MC4 LINE L1 -2 8040 7531 2014 130 20 10 chr20 33782718 33783018 -38370864 + AluSx SINE Alu 1 303 -9 1898 211 107 26 chr20 33783018 33783190 -38370692 - L1MC4 LINE L1 -511 7531 7374 1229 130 5 5 chr20 33783190 33783375 -38370507 - AluSq SINE Alu 0 313 129 1788 184 10 10 chr20 33783427 33783732 -38370150 - AluJo SINE Alu -7 305 1 2292 120 0 0 chr20 33783984 33784284 -38369598 - AluSp SINE Alu -13 300 1 747 165 0 0 chr20 33784313 33784434 -38369448 + FLAM_A SINE Alu 1 121 -12 21 0 0 0 chr20 33784447 33784468 -38369414 + AT_rich Low_complexity Low_complexity 1 21 0 357 255 89 19 chr20 33784491 33784648 -38369234 - L1ME4a LINE L1 -79 6042 5875 1754 147 11 0 chr20 33784814 33785080 -38368802 - AluJo SINE Alu 0 312 44 2174 124 0 16 chr20 33785321 33785628 -38368254 - AluSq SINE Alu -11 302 1 2421 92 0 0 chr20 33786678 33786970 -38366912 - AluSg SINE Alu -18 292 1 249 162 0 0 chr20 33787381 33787418 -38366464 - AluJo SINE Alu -266 37 1 797 210 116 68 chr20 33787565 33788046 -38365836 - MLT1H LTR MaLR -4 545 1 269 227 171 11 chr20 33789002 33789090 -38364792 + MIR SINE MIR 13 114 -148 229 183 97 11 chr20 33789275 33789368 -38364514 - Charlie7 DNA MER1_type -69 2543 2443 1316 160 14 0 chr20 33790053 33790265 -38363617 + AluJb SINE Alu 88 302 -10 544 268 79 51 chr20 33790524 33790778 -38363104 - MIR SINE MIR 0 262 2 234 292 0 14 chr20 33790876 33790948 -38362934 - L2 LINE L2 -214 3058 2988 2183 112 14 3 chr20 33791180 33791476 -38362406 + AluSx SINE Alu 1 299 -13 277 297 45 18 chr20 33791763 33791874 -38362008 + L2 LINE L2 3158 3271 -1 966 126 6 11 chr20 33792386 33792560 -38361322 + (TTCC)n Simple_repeat Simple_repeat 4 176 0 2120 132 16 13 chr20 33792573 33792884 -38360998 - AluSx SINE Alu 0 312 1 203 239 0 0 chr20 33792991 33793037 -38360845 + MIR SINE MIR 105 150 -112 1146 145 21 31 chr20 33793507 33793700 -38360182 - AluJb SINE Alu -14 298 108 518 81 14 0 chr20 33793708 33793782 -38360100 - MADE1 DNA Mariner 0 80 6 1381 161 0 18 chr20 33793803 33794027 -38359855 - AluJo SINE Alu -92 220 1 322 160 11 85 chr20 33794116 33794210 -38359672 - L1ME4a LINE L1 -74 6047 5961 2198 206 52 66 chr20 33794215 33794372 -38359510 - MLT1E LTR MaLR -8 585 427 2212 121 0 0 chr20 33794372 33794661 -38359221 + AluSx SINE Alu 6 294 -18 2198 206 52 66 chr20 33794661 33794904 -38358978 - MLT1E LTR MaLR -166 427 193 2365 88 7 0 chr20 33794904 33795200 -38358682 - AluSp SINE Alu -15 298 1 2198 206 52 66 chr20 33795200 33795391 -38358491 - MLT1E LTR MaLR -400 193 1 367 308 42 8 chr20 33795421 33795541 -38358341 - L1ME4a LINE L1 -206 5915 5792 1985 158 0 10 chr20 33796162 33796466 -38357416 - AluJo SINE Alu -11 301 1 2258 110 23 0 chr20 33796515 33796816 -38357066 - AluSx SINE Alu -4 308 1 1243 148 0 48 chr20 33796921 33797150 -38356732 - AluJo SINE Alu 0 312 95 22 0 0 0 chr20 33797160 33797182 -38356700 + AT_rich Low_complexity Low_complexity 1 22 0 604 209 15 8 chr20 33797832 33797966 -38355916 + MIR SINE MIR 3 137 -125 2172 118 0 26 chr20 33798170 33798474 -38355408 + AluSg SINE Alu 1 296 -14 2440 97 0 3 chr20 33798474 33798784 -38355098 + AluSq SINE Alu 1 309 -4 831 71 0 0 chr20 33798945 33799043 -38354839 - AluSc SINE Alu -211 98 1 1525 102 208 12 chr20 33799244 33799489 -38354393 + AluSg1 SINE Alu 1 293 -16 1875 171 0 0 chr20 33799578 33799871 -38354011 - AluJb SINE Alu -5 307 15 1569 191 16 20 chr20 33799885 33800188 -38353694 - AluJb SINE Alu -10 302 1 1291 129 11 0 chr20 33800198 33800384 -38353498 - AluSg/x SINE Alu -2 310 123 2169 123 0 7 chr20 33800405 33800713 -38353169 - AluSx SINE Alu -6 306 1 2341 101 0 16 chr20 33801167 33801473 -38352409 - AluSq SINE Alu -12 301 1 708 250 87 63 chr20 33802240 33802349 -38351533 - MIR SINE MIR 0 262 157 2141 148 0 3 chr20 33802349 33802659 -38351223 + AluJb SINE Alu 1 309 -3 708 250 87 63 chr20 33802659 33802801 -38351081 - MIR SINE MIR -105 157 5 2492 100 0 0 chr20 33802861 33803172 -38350710 - AluSx SINE Alu 0 312 2 196 342 61 0 chr20 33803430 33803544 -38350338 + MIR3 SINE MIR 66 186 -22 1979 138 50 0 chr20 33803664 33803946 -38349936 + AluJb SINE Alu 3 298 -14 337 137 0 0 chr20 33803946 33803997 -38349885 + Alu SINE Alu 1 51 -250 315 208 0 52 chr20 33803971 33804048 -38349834 + AluJo/FRAM SINE Alu 201 273 -29 * 1157 16 0 0 chr20 33804170 33804297 -38349585 - AluYb8 SINE Alu -7 311 185 418 222 30 67 chr20 33804611 33804746 -38349136 - MIR SINE MIR -66 196 67 815 227 58 36 chr20 33805098 33805406 -38348476 - MER39 LTR ERV1 0 707 393 356 324 83 0 chr20 33805410 33805555 -38348327 - MER34 LTR ERV1 -382 160 4 1988 158 0 7 chr20 33805937 33806234 -38347648 - AluSx SINE Alu -16 296 2 821 153 227 11 chr20 33806324 33806500 -38347382 - MER21B LTR ERV1 -371 492 279 246 109 164 0 chr20 33806531 33806586 -38347296 - MER21A LTR ERV1 -867 64 1 2959 153 28 46 chr20 33806685 33806859 -38347023 - MER21A-int LTR ERV1 -56 4135 3959 2383 116 0 0 chr20 33806859 33807161 -38346721 - AluSq SINE Alu -11 302 1 2959 153 28 46 chr20 33807161 33807592 -38346290 - MER21A-int LTR ERV1 -232 3959 3541 2276 90 35 3 chr20 33807592 33807881 -38346001 + AluSq SINE Alu 3 300 -13 4168 177 34 19 chr20 33807891 33808169 -38345713 - MER21A-int LTR ERV1 -1719 2472 2200 2093 141 0 25 chr20 33808169 33808352 -38345530 - AluSx SINE Alu 0 312 139 2367 83 0 0 chr20 33808352 33808659 -38345223 - AluY SINE Alu 0 311 1 2093 141 0 25 chr20 33808659 33808795 -38345087 - AluSx SINE Alu -173 139 1 4168 177 34 19 chr20 33808795 33809312 -38344570 - MER21A-int LTR ERV1 -1991 2200 1665 2100 84 0 131 chr20 33809357 33809700 -38344182 - AluSx SINE Alu -14 298 1 220 212 152 30 chr20 33809939 33810005 -38343877 - MIR SINE MIR -70 192 119 244 328 165 1 chr20 33810301 33810426 -38343456 + MIR SINE MIR 20 162 -83 838 277 8 4 chr20 33811715 33811950 -38341932 + MIR SINE MIR 2 237 -25 232 253 48 48 chr20 33812553 33812636 -38341246 + MIR SINE MIR 71 153 -55 2313 94 3 0 chr20 33812959 33813257 -38340625 + AluSx SINE Alu 2 300 -12 191 324 0 14 chr20 33813456 33813527 -38340355 - MIR SINE MIR -19 243 174 2153 127 0 7 chr20 33813726 33813895 -38339987 - AluJb SINE Alu -10 302 134 2305 96 7 0 chr20 33813895 33814186 -38339696 - AluSg SINE Alu -17 293 1 2153 127 0 7 chr20 33814186 33814316 -38339566 - AluJb SINE Alu -178 134 5 370 117 33 0 chr20 33814640 33814700 -38339182 - AluJ/FRAM SINE Alu -22 280 219 365 269 26 58 chr20 33814709 33814865 -38339017 - MIR3 SINE MIR -13 195 45 2411 83 3 0 chr20 33815384 33815684 -38338198 + AluSx SINE Alu 1 301 -11 374 275 98 95 chr20 33815941 33816246 -38337636 + L2 LINE L2 2967 3272 0 474 324 50 12 chr20 33816348 33816598 -38337284 + MIR SINE MIR 6 261 -1 1067 68 15 0 chr20 33816776 33816908 -38336974 - AluSx SINE Alu -12 300 167 1312 112 0 0 chr20 33817013 33817182 -38336700 - AluSx SINE Alu -143 169 1 1000 176 6 6 chr20 33817492 33817657 -38336225 - FRAM SINE Alu -11 165 1 2271 117 0 0 chr20 33818496 33818805 -38335077 - AluSx SINE Alu -3 309 1 246 337 114 10 chr20 33819475 33819668 -38334214 - MIR SINE MIR -48 214 2 386 238 80 3 chr20 33820261 33820408 -38333474 + MIR SINE MIR 23 183 -62 216 261 108 0 chr20 33820460 33820525 -38333357 - L2 LINE L2 -94 3178 3107 1813 129 3 97 chr20 33820978 33821224 -38332658 - AluJo SINE Alu -4 308 101 2296 122 3 0 chr20 33821224 33821535 -38332347 - AluSx SINE Alu 0 312 1 1813 129 3 97 chr20 33821535 33821628 -38332254 - AluJo SINE Alu -211 101 1 690 367 106 10 chr20 33822341 33823051 -38330831 + L2 LINE L2 2510 3313 0 1559 148 115 4 chr20 33823104 33823374 -38330508 - AluJb SINE Alu -9 303 4 205 340 0 43 chr20 33824447 33824541 -38329341 + L2 LINE L2 3183 3272 0 265 187 33 66 chr20 33824545 33824636 -38329246 + MIR SINE MIR 95 182 -80 2441 68 20 0 chr20 33824770 33824894 -38328988 + AluY SINE Alu 3 123 -188 243 0 0 0 chr20 33824894 33824921 -38328961 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2441 68 20 0 chr20 33824921 33825092 -38328790 + AluY SINE Alu 123 304 -7 2437 86 3 0 chr20 33825234 33825538 -38328344 - AluSp SINE Alu -8 305 1 332 262 24 0 chr20 33825892 33825976 -38327906 - MIR3 SINE MIR -40 168 83 2002 81 24 110 chr20 33826021 33826221 -38327661 - AluSq SINE Alu -7 306 145 2278 109 0 10 chr20 33826221 33826532 -38327350 - AluSc SINE Alu -1 308 1 2002 81 24 110 chr20 33826532 33826666 -38327216 - AluSq SINE Alu -168 145 1 1551 99 32 0 chr20 33826889 33827110 -38326772 + MER30 DNA MER1_type 3 230 0 202 220 267 0 chr20 33827182 33827336 -38326546 + L2 LINE L2 2783 2971 -342 276 30 0 0 chr20 33827339 33827372 -38326510 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 2206 90 0 4 chr20 33827372 33827650 -38326232 - AluSc SINE Alu -32 277 1 38 22 0 0 chr20 33827653 33827698 -38326184 + AT_rich Low_complexity Low_complexity 1 45 0 243 309 202 0 chr20 33827835 33828023 -38325859 - L2 LINE L2 -569 2745 2520 319 140 0 0 chr20 33828070 33828120 -38325762 + Alu SINE Alu 249 298 -4 952 190 0 0 chr20 33828129 33828287 -38325595 + AluJo SINE Alu 1 158 -154 233 267 17 26 chr20 33828871 33828987 -38324895 + L2 LINE L2 2932 3046 -267 1780 138 75 11 chr20 33829675 33829957 -38323925 - AluJo SINE Alu -12 300 1 1880 151 10 0 chr20 33829968 33830260 -38323622 - AluJo SINE Alu -14 298 4 2084 121 0 46 chr20 33830268 33830591 -38323291 - AluSx SINE Alu -4 308 1 922 200 91 17 chr20 33830863 33831093 -38322789 - MER39 LTR ERV1 -13 694 448 2318 96 10 0 chr20 33831145 33831438 -38322444 + AluSx SINE Alu 1 296 -16 262 284 10 49 chr20 33831508 33831610 -38322272 - LTR48B LTR ERV1 -543 101 4 252 179 66 113 chr20 33832828 33832934 -38320948 + MIR SINE MIR 45 145 -63 21 0 0 0 chr20 33836324 33836345 -38317537 + AT_rich Low_complexity Low_complexity 1 21 0 2233 104 17 0 chr20 33836403 33836702 -38317180 - AluSx SINE Alu -8 304 1 208 250 0 18 chr20 33837505 33837561 -38316321 + MIR SINE MIR 106 160 -102 2040 99 43 13 chr20 33837821 33838123 -38315759 + AluSq SINE Alu 1 311 -2 210 307 87 55 chr20 33838135 33838262 -38315620 + MIR SINE MIR 37 167 -95 223 341 56 24 chr20 33838673 33838799 -38315083 - L2 LINE L2 0 3272 3143 2097 167 19 6 chr20 33838800 33839160 -38314722 - MLT1A1 LTR MaLR 0 365 1 6129 198 121 36 chr20 33839160 33840132 -38313750 - MLT1A1-int LTR MaLR 0 1735 847 1960 133 69 30 chr20 33840132 33840493 -38313389 - THE1C LTR MaLR 0 375 1 6129 198 121 36 chr20 33840493 33840565 -38313317 - MLT1A1-int LTR MaLR -888 847 783 1693 154 23 40 chr20 33840565 33840864 -38313018 - AluJo SINE Alu -16 296 3 6129 198 121 36 chr20 33840864 33841337 -38312545 - MLT1A1-int LTR MaLR -952 783 72 2100 134 3 3 chr20 33841337 33841636 -38312246 - AluSx SINE Alu -13 299 1 6129 198 121 36 chr20 33841636 33841715 -38312167 - MLT1A1-int LTR MaLR -1663 72 1 1774 174 54 37 chr20 33841715 33841919 -38311963 - MLT1A1 LTR MaLR 0 365 151 1914 155 10 20 chr20 33841919 33842223 -38311659 - AluJo SINE Alu -11 301 1 1774 174 54 37 chr20 33842223 33842368 -38311514 - MLT1A1 LTR MaLR -214 151 10 210 278 38 60 chr20 33842505 33842638 -38311244 - L2 LINE L2 -254 3059 2930 229 182 0 121 chr20 33842745 33842811 -38311071 + MIR SINE MIR 193 250 -12 556 223 54 0 chr20 33843319 33843449 -38310433 - MIR SINE MIR -99 163 27 200 274 27 68 chr20 33843737 33843883 -38309999 - MIR3 SINE MIR -24 184 45 2101 136 0 7 chr20 33845161 33845463 -38308419 - AluSx SINE Alu -12 300 1 2665 84 6 6 chr20 33846072 33846427 -38307455 - THE1A LTR MaLR 0 355 1 1759 166 35 0 chr20 33846866 33847026 -38306856 - AluJo SINE Alu -18 294 118 279 0 0 0 chr20 33847026 33847057 -38306825 + (TG)n Simple_repeat Simple_repeat 2 32 0 1759 166 35 0 chr20 33847057 33847180 -38306702 - AluJo SINE Alu -194 118 1 2120 123 7 0 chr20 33847493 33847793 -38306089 - AluSx SINE Alu -10 302 1 386 379 0 0 chr20 33847798 33847996 -38305886 - L1ME LINE L1 -298 5823 5626 743 287 22 38 chr20 33848101 33848470 -38305412 - L2 LINE L2 -52 3261 2899 204 209 0 0 chr20 33848478 33848521 -38305361 + CT-rich Low_complexity Low_complexity 2 44 0 1715 177 7 13 chr20 33848566 33848865 -38305017 + AluJb SINE Alu 1 297 -15 1954 126 7 3 chr20 33848868 33849154 -38304728 + AluSx SINE Alu 1 287 -25 293 210 58 94 chr20 33849658 33849722 -38304160 - MIR SINE MIR -5 257 192 1723 160 10 46 chr20 33849722 33850028 -38303854 - AluJo SINE Alu -17 295 1 293 210 58 94 chr20 33850028 33850101 -38303781 - MIR SINE MIR -70 192 125 513 275 14 14 chr20 33850173 33850311 -38303571 - MIR SINE MIR -105 157 20 2094 139 3 7 chr20 33850873 33851183 -38302699 - AluSx SINE Alu -3 309 1 974 106 0 0 chr20 33851185 33851317 -38302565 - AluJb SINE Alu -180 132 1 241 260 62 21 chr20 33851872 33851968 -38301914 + L1ME4a LINE L1 5776 5875 -246 4593 12 0 0 chr20 33852174 33852685 -38301197 - L1PA3 LINE L1 0 6155 5645 552 162 182 0 chr20 33852714 33852868 -38301014 - MER69 DNA AcHobo -1 2525 2344 235 105 0 26 chr20 33852919 33852957 -38300925 - MER69 DNA AcHobo -2489 37 1 204 40 0 0 chr20 33852987 33853012 -38300870 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2227 111 0 0 chr20 33853020 33853309 -38300573 - AluSx SINE Alu -23 289 1 358 234 65 19 chr20 33853310 33853417 -38300465 + L1ME4a LINE L1 5982 6093 -28 1628 139 88 0 chr20 33853492 33853787 -38300095 - L1MB3 LINE L1 -3 6180 5860 4030 179 44 26 chr20 33853791 33853898 -38299984 - L1 LINE L1 -1721 4425 4321 2355 100 0 3 chr20 33853898 33854199 -38299683 - AluSg SINE Alu -10 300 1 4030 179 44 26 chr20 33854199 33854983 -38298899 - L1 LINE L1 -1825 4321 3518 215 61 30 0 chr20 33855082 33855115 -38298767 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 279 114 0 0 chr20 33855119 33855163 -38298719 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 902 93 8 23 chr20 33855167 33855296 -38298586 - FLAM_C SINE Alu -6 137 11 467 281 0 16 chr20 33855769 33855890 -38297992 - L2 LINE L2 -5 3267 3149 465 232 116 64 chr20 33857077 33857141 -38296741 + L1ME3A LINE L1 5646 5705 -465 2370 92 0 3 chr20 33857141 33857434 -38296448 + AluSg SINE Alu 1 292 -18 465 232 116 64 chr20 33857434 33857619 -38296263 + L1ME3A LINE L1 5705 5908 -262 357 260 52 88 chr20 33857636 33857761 -38296121 + L1ME3A LINE L1 5986 6103 -67 2225 103 7 0 chr20 33857761 33858052 -38295830 + AluSx SINE Alu 1 293 -19 357 260 52 88 chr20 33858052 33858118 -38295764 + L1ME3A LINE L1 6103 6170 0 257 252 76 76 chr20 33858111 33858242 -38295640 - HAL1 LINE L1 -33 2474 2344 * 405 222 74 9 chr20 33858404 33858512 -38295370 - L1MC/D LINE L1 -2107 5701 5587 405 326 94 4 chr20 33858669 33858902 -38294980 - MIR SINE MIR -1 261 8 1596 127 40 63 chr20 33858996 33859343 -38294539 - L1MA7 LINE L1 0 6291 5953 2265 91 7 0 chr20 33859361 33859647 -38294235 + AluSx SINE Alu 1 288 -24 954 93 31 0 chr20 33859679 33859808 -38294074 - FLAM_C SINE Alu 0 133 1 4793 150 15 56 chr20 33859808 33860219 -38293663 - L1MA7 LINE L1 -327 5964 5538 2708 86 14 0 chr20 33860219 33860578 -38293304 + THE1B LTR MaLR 1 364 0 4793 150 15 56 chr20 33860578 33860853 -38293029 - L1MA7 LINE L1 -753 5538 5253 2300 109 3 0 chr20 33860853 33861164 -38292718 - AluSq SINE Alu -1 312 1 2175 107 21 0 chr20 33861174 33861465 -38292417 - AluSp SINE Alu -16 297 1 4793 150 15 56 chr20 33861465 33861685 -38292197 - L1MA7 LINE L1 -1047 5244 5017 2213 134 0 3 chr20 33861685 33861998 -38291884 - AluSx SINE Alu 0 312 1 4793 150 15 56 chr20 33861998 33862715 -38291167 - L1MA7 LINE L1 -1274 5017 4398 208 138 0 77 chr20 33862733 33862798 -38291084 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 1071 75 8 0 chr20 33862803 33862936 -38290946 - AluSp SINE Alu -171 142 9 4424 209 73 16 chr20 33863100 33863283 -38290599 + L1MB8 LINE L1 3392 3563 -2583 2350 107 0 0 chr20 33863283 33863581 -38290301 - AluSg SINE Alu -12 298 1 4424 209 73 16 chr20 33863581 33864560 -38289322 + L1MB8 LINE L1 3563 4620 -1526 1049 92 5 32 chr20 33864588 33864710 -38289172 + (TTTC)n Simple_repeat Simple_repeat 1 298 0 1049 92 5 32 chr20 33864710 33864895 -38288987 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2204 115 7 7 chr20 33864942 33865246 -38288636 - AluSg SINE Alu -5 305 2 734 174 0 22 chr20 33865267 33865360 -38288522 + CT-rich Low_complexity Low_complexity 1 90 -90 2256 105 7 0 chr20 33865360 33865656 -38288226 - AluSx SINE Alu -11 301 4 734 174 0 22 chr20 33865656 33865746 -38288136 + CT-rich Low_complexity Low_complexity 90 180 0 4529 174 46 20 chr20 33865754 33866636 -38287246 + L1MB8 LINE L1 4654 5591 -587 2288 91 7 23 chr20 33866636 33866945 -38286937 + AluSq SINE Alu 1 304 -9 4529 174 46 20 chr20 33866945 33867542 -38286340 + L1MB8 LINE L1 5591 6171 -7 227 260 0 0 chr20 33867674 33867724 -38286158 - L1ME LINE L1 -518 5603 5554 359 192 75 9 chr20 33867871 33868059 -38285823 - L1P5 LINE L1 -671 5480 5279 879 148 0 0 chr20 33868069 33868197 -38285685 + FLAM_C SINE Alu 1 128 -5 450 290 66 16 chr20 33868825 33869008 -38284874 + MIR SINE MIR 30 221 -41 197 239 46 46 chr20 33869089 33869198 -38284684 - MIR SINE MIR -67 141 33 209 269 0 0 chr20 33869612 33869664 -38284218 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 326 289 2 21 chr20 33869740 33869852 -38284030 - L1ME3A LINE L1 -4 6158 6048 294 100 0 0 chr20 33869857 33869897 -38283985 + Alu SINE Alu 1 40 -262 1505 116 0 0 chr20 33869955 33870154 -38283728 + AluSg/x SINE Alu 107 305 -5 1072 253 21 3 chr20 33870159 33870444 -38283438 - L1M1 LINE L1 -4444 1526 1237 2088 232 87 39 chr20 33870485 33870811 -38283071 - L1M1 LINE L1 -4516 1375 1066 1818 156 14 3 chr20 33870811 33871120 -38282762 - AluJb SINE Alu 0 312 1 2088 232 87 39 chr20 33871120 33871460 -38282422 - L1M1 LINE L1 -4825 1066 676 777 304 67 40 chr20 33871605 33872219 -38281663 - L1M1 LINE L1 -5390 501 1 321 268 65 26 chr20 33872291 33872312 -38281570 - L1MA10 LINE L1 0 6334 6314 2380 216 104 8 chr20 33872312 33872965 -38280917 - L1ME1 LINE L1 -10 6156 5420 * 8814 212 104 35 chr20 33872920 33873464 -38280418 + L1ME1 LINE L1 2522 3027 -3139 699 109 134 25 chr20 33873464 33873583 -38280299 + FLAM_C SINE Alu 1 132 -1 8814 212 104 35 chr20 33873583 33874178 -38279704 + L1ME1 LINE L1 3027 3580 -2586 577 35 0 35 chr20 33874178 33874264 -38279618 + (GAAA)n Simple_repeat Simple_repeat 3 85 0 8814 212 104 35 chr20 33874264 33875381 -38278501 + L1ME1 LINE L1 3580 4619 -1547 2008 135 0 3 chr20 33875381 33875704 -38278178 + AluSx SINE Alu 1 322 0 8814 212 104 35 chr20 33875704 33876069 -38277813 + L1ME1 LINE L1 4619 4958 -1208 4041 93 57 0 chr20 33876069 33876618 -38277264 - LTR19B LTR ERV1 0 580 1 8814 212 104 35 chr20 33876618 33877285 -38276597 + L1ME1 LINE L1 4958 6048 -118 278 206 0 0 chr20 33877282 33877345 -38276537 + L1MA10 LINE L1 6269 6331 -3 * 1581 206 127 10 chr20 33877345 33877642 -38276240 - L1ME LINE L1 -699 5467 5206 2018 144 0 16 chr20 33877642 33877947 -38275935 + AluJb SINE Alu 1 300 -12 1581 206 127 10 chr20 33877947 33878207 -38275675 - L1ME LINE L1 -960 5206 4850 841 257 16 12 chr20 33878209 33878458 -38275424 - L1ME1 LINE L1 -768 5378 5129 5151 159 29 29 chr20 33878481 33879470 -38274412 - L1MB2 LINE L1 -7 6164 5176 2002 141 17 0 chr20 33879470 33879769 -38274113 - AluSq SINE Alu -8 305 2 5151 159 29 29 chr20 33879769 33880219 -38273663 - L1MB2 LINE L1 -995 5176 4727 1066 189 21 29 chr20 33880360 33880603 -38273279 - L1MB2 LINE L1 -2156 3990 3750 1769 177 0 0 chr20 33880923 33881206 -38272676 + AluJo SINE Alu 2 313 0 192 35 0 35 chr20 33881206 33881235 -38272647 + (TAAAA)n Simple_repeat Simple_repeat 2 165 0 1879 268 123 49 chr20 33881511 33882953 -38270929 - L1MEc LINE L1 -4012 2384 836 24 32 0 0 chr20 33882964 33882995 -38270887 + AT_rich Low_complexity Low_complexity 1 31 0 546 304 38 59 chr20 33884742 33885031 -38268851 - L2 LINE L2 -5 3267 2985 2201 105 0 0 chr20 33888207 33888501 -38265381 - AluSx SINE Alu -18 294 1 460 164 92 29 chr20 33888682 33888806 -38265076 - MLT1C LTR MaLR 0 467 353 863 188 47 60 chr20 33889188 33889422 -38264460 - MLT1C LTR MaLR -23 444 214 298 111 0 48 chr20 33889453 33889516 -38264366 + (TTTTC)n Simple_repeat Simple_repeat 5 64 0 694 101 0 64 chr20 33889517 33889705 -38264177 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 1630 167 0 50 chr20 33889717 33889910 -38263972 - AluJo SINE Alu -10 302 130 2175 129 0 0 chr20 33889910 33890219 -38263663 + AluSx SINE Alu 1 309 -3 1630 167 0 50 chr20 33890219 33890343 -38263539 - AluJo SINE Alu -182 130 1 1036 156 17 0 chr20 33890350 33890523 -38263359 - MLT1C LTR MaLR -291 176 1 2139 109 13 0 chr20 33890578 33890882 -38263000 - AluSx SINE Alu -4 308 1 548 296 87 0 chr20 33891207 33891403 -38262479 - MIR SINE MIR -9 253 41 444 246 131 24 chr20 33891887 33892095 -38261787 - MIR SINE MIR -36 226 4 398 243 132 7 chr20 33893485 33893621 -38260261 - L1ME4a LINE L1 -2 6119 5967 2167 96 0 3 chr20 33894032 33894323 -38259559 - AluSx SINE Alu -22 290 1 358 265 0 0 chr20 33894467 33894565 -38259317 + (CA)n Simple_repeat Simple_repeat 1 98 0 197 218 150 120 chr20 33895258 33895391 -38258491 + L2 LINE L2 2928 3064 -249 224 81 27 0 chr20 33895930 33895967 -38257915 - MIR SINE MIR -118 144 107 224 320 19 19 chr20 33896157 33896260 -38257622 - MIR SINE MIR -70 138 36 305 262 213 0 chr20 33896454 33896576 -38257306 + MIR SINE MIR 20 167 -95 2542 114 50 0 chr20 33896922 33897280 -38256602 + MER51B LTR ERV1 1 376 -1 247 258 25 50 chr20 33897286 33897445 -38256437 + (TCTCTG)n Simple_repeat Simple_repeat 2 156 0 409 245 63 25 chr20 33897845 33898004 -38255878 - LTR43 LTR ERV1 -306 296 132 543 229 9 0 chr20 33898182 33898287 -38255595 - MER81 DNA DNA -3 111 6 483 258 184 0 chr20 33899072 33899235 -38254647 + MIR SINE MIR 5 197 -65 210 296 0 0 chr20 33899320 33899374 -38254508 - MIR SINE MIR -140 122 69 944 229 12 41 chr20 33899411 33899655 -38254227 - MIR SINE MIR 0 262 26 292 311 47 9 chr20 33900135 33900241 -38253641 - MIR SINE MIR -70 192 83 2640 88 133 5 chr20 33900305 33900702 -38253180 + LTR7 LTR ERV1 1 448 -2 4720 38 2 5 chr20 33900774 33901332 -38252550 + LTR6B LTR ERV1 1 556 -2 251 309 12 0 chr20 33901442 33901526 -38252356 + MIR SINE MIR 43 127 -81 479 297 0 36 chr20 33901649 33901787 -38252095 + MIR SINE MIR 21 153 -109 2665 118 31 14 chr20 33902319 33902741 -38251141 - LTR3 LTR ERVK -3 429 1 243 227 23 45 chr20 33903081 33903169 -38250713 - MIR SINE MIR -134 128 43 2011 129 3 3 chr20 33904102 33904404 -38249478 + AluSx SINE Alu 1 302 -10 1822 166 0 3 chr20 33904587 33904877 -38249005 - AluSx SINE Alu -17 295 7 228 135 0 0 chr20 33905028 33905065 -38248817 - MIR SINE MIR -63 145 109 241 299 0 0 chr20 33905377 33905444 -38248438 - L2 LINE L2 -1 3312 3246 284 197 16 0 chr20 33906680 33906741 -38247141 + MIR SINE MIR 76 137 -125 329 333 135 19 chr20 33906936 33907515 -38246367 + L1M4 LINE L1 4357 5002 -1144 1571 106 0 5 chr20 33907620 33907838 -38246044 + AluSg/x SINE Alu 83 299 -13 199 267 0 0 chr20 33908739 33908784 -38245098 - L2 LINE L2 -18 3254 3210 247 242 0 30 chr20 33908934 33909000 -38244882 - MIR SINE MIR -69 139 76 235 297 24 36 chr20 33909072 33909189 -38244693 - MIR3 SINE MIR -51 157 41 331 280 28 9 chr20 33909202 33909309 -38244573 + MIR SINE MIR 37 145 -117 302 246 0 0 chr20 33909697 33909766 -38244116 - MIR SINE MIR -63 145 77 318 217 50 71 chr20 33909833 33909971 -38243911 + MIR SINE MIR 65 192 -70 239 272 56 46 chr20 33910184 33910303 -38243579 - MIR SINE MIR -71 137 16 218 273 23 8 chr20 33910589 33910689 -38243193 + MIR SINE MIR 87 187 -75 205 312 52 0 chr20 33910927 33910981 -38242901 - L3 LINE CR1 -117 1460 1403 302 232 56 40 chr20 33910981 33911106 -38242776 + MIR3 SINE MIR 2 128 -80 269 260 27 0 chr20 33911661 33911734 -38242148 + L2 LINE L2 2989 3063 -209 354 98 0 0 chr20 33911820 33911871 -38242011 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 409 309 103 12 chr20 33911895 33912060 -38241822 - MIR SINE MIR -81 181 2 264 180 33 0 chr20 33912762 33912823 -38241059 + MIR SINE MIR 77 139 -69 407 248 8 72 chr20 33912827 33912952 -38240930 + MIR SINE MIR 28 144 -118 378 315 9 41 chr20 33913062 33913327 -38240555 + C-rich Low_complexity Low_complexity 1 256 0 755 148 0 0 chr20 33913613 33913735 -38240147 - AluSc SINE Alu -2 307 186 268 313 40 0 chr20 33913756 33913855 -38240027 + MIR SINE MIR 140 242 -20 243 252 97 39 chr20 33913887 33913990 -38239892 - MIR SINE MIR -63 145 37 2112 103 0 0 chr20 33914241 33914553 -38239329 - AluSx SINE Alu 0 312 1 2377 74 0 0 chr20 33914580 33914889 -38238993 - AluY SINE Alu -2 309 1 199 47 0 93 chr20 33915077 33915120 -38238762 + (CACCC)n Simple_repeat Simple_repeat 4 42 0 415 214 34 0 chr20 33915648 33915737 -38238145 + MIR SINE MIR 74 165 -97 746 250 112 5 chr20 33915746 33915970 -38237912 - MIR SINE MIR -13 249 2 2021 191 162 12 chr20 33916051 33916594 -38237288 + MLT1G LTR MaLR 2 590 0 295 276 61 10 chr20 33916607 33916705 -38237177 - MIR SINE MIR -94 168 66 775 261 149 0 chr20 33916990 33917212 -38236670 - MIR SINE MIR -6 256 2 457 271 32 52 chr20 33917458 33917593 -38236289 + HAL1 LINE L1 2 135 -2372 392 303 56 67 chr20 33917593 33917788 -38236094 + MER91A DNA MER1_type 4 196 0 457 271 32 52 chr20 33917788 33917807 -38236075 + HAL1 LINE L1 135 153 -2354 958 171 25 0 chr20 33917807 33917965 -38235917 - MER20 DNA MER1_type -57 162 1 521 204 163 41 chr20 33918003 33918199 -38235683 + HAL1 LINE L1 265 484 -2023 1122 251 107 7 chr20 33918199 33918760 -38235122 + L1ME LINE L1 5072 5696 -474 333 297 34 34 chr20 33918752 33918927 -38234955 + HAL1 LINE L1 1189 1363 -1144 * 729 258 26 37 chr20 33919363 33919553 -38234329 - MER5A DNA MER1_type 0 189 2 1110 284 44 54 chr20 33919974 33920281 -38233601 + L1MCc LINE L1 1284 1593 -1709 1469 158 124 0 chr20 33920281 33920546 -38233336 + AluSx SINE Alu 1 298 -14 1110 284 44 54 chr20 33920546 33921249 -38232633 + L1MCc LINE L1 1593 2581 -721 635 343 46 8 chr20 33921684 33921923 -38231959 - MIR SINE MIR -6 256 9 314 365 6 11 chr20 33922115 33922293 -38231589 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 245 274 0 9 chr20 33922342 33922455 -38231427 + (TCCA)n Simple_repeat Simple_repeat 4 115 0 227 221 15 15 chr20 33922493 33922561 -38231321 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 325 341 230 0 chr20 33922565 33922782 -38231100 - L2 LINE L2 -3 3269 3003 674 268 33 11 chr20 33923394 33923577 -38230305 + MIR SINE MIR 16 202 -60 1660 120 30 63 chr20 33923721 33924022 -38229860 + AluJb SINE Alu 1 291 -21 819 95 32 32 chr20 33924031 33924157 -38229725 + AluSg/x SINE Alu 182 307 -5 1750 238 27 31 chr20 33924158 33924401 -38229481 + L1 LINE L1 3918 4160 -1986 1582 166 12 63 chr20 33924401 33924720 -38229162 + AluJo SINE Alu 1 303 -9 1750 238 27 31 chr20 33924720 33924955 -38228927 + L1 LINE L1 4160 4394 -1752 2186 93 3 0 chr20 33924977 33925267 -38228615 + AluSg1 SINE Alu 1 291 -18 239 271 47 24 chr20 33925616 33925701 -38228181 - MIR SINE MIR -118 144 58 240 182 117 13 chr20 33925899 33925976 -38227906 + L2 LINE L2 2965 3049 -223 196 182 23 0 chr20 33926189 33926233 -38227649 - L2 LINE L2 -290 2982 2938 2012 127 27 0 chr20 33926235 33926527 -38227355 + AluJb SINE Alu 1 300 -12 813 45 30 15 chr20 33927172 33927305 -38226577 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 234 0 0 0 chr20 33927306 33927332 -38226550 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 1932 116 60 0 chr20 33927332 33927616 -38226266 - AluSg SINE Alu -9 301 1 269 364 0 7 chr20 33927838 33927981 -38225901 + (TGGA)n Simple_repeat Simple_repeat 3 144 0 196 227 186 10 chr20 33928654 33928751 -38225131 - MIR SINE MIR -65 143 30 583 300 128 36 chr20 33928877 33929267 -38224615 + MLT1L LTR MaLR 138 563 -52 21 0 0 0 chr20 33929316 33929337 -38224545 + AT_rich Low_complexity Low_complexity 1 21 0 430 350 0 0 chr20 33929611 33929748 -38224134 + L2 LINE L2 3133 3269 -3 234 358 9 28 chr20 33929751 33929860 -38224022 + MIR SINE MIR 64 170 -92 188 333 17 42 chr20 33930217 33930337 -38223545 - MIR3 SINE MIR -42 166 50 1708 145 7 14 chr20 33930514 33930804 -38223078 + AluSx SINE Alu 5 292 -20 2039 205 48 36 chr20 33930975 33931472 -38222410 + MLT1D LTR MaLR 3 505 0 259 239 250 0 chr20 33931559 33931647 -38222235 - L2 LINE L2 0 3272 3163 181 418 0 0 chr20 33931646 33931713 -38222169 + MIR SINE MIR 196 262 0 * 220 320 20 26 chr20 33932277 33932430 -38221452 + (CA)n Simple_repeat Simple_repeat 1 152 0 318 307 99 0 chr20 33934433 33934534 -38219348 + L2 LINE L2 3200 3310 -3 293 315 93 25 chr20 33935638 33935800 -38218082 - MIR3 SINE MIR -15 193 21 203 188 16 62 chr20 33935981 33936045 -38217837 + MIR SINE MIR 202 262 0 358 248 137 72 chr20 33936086 33936239 -38217643 - MIR SINE MIR -72 190 28 263 286 116 0 chr20 33937249 33937361 -38216521 - Charlie8 DNA MER1_type -2230 187 63 2138 110 0 0 chr20 33937363 33937684 -38216198 + AluSq SINE Alu 3 323 0 367 349 101 18 chr20 33938206 33938375 -38215507 - L3 LINE CR1 -28 1549 1367 280 222 152 20 chr20 33938752 33938851 -38215031 + MIR SINE MIR 64 175 -33 639 281 14 29 chr20 33939056 33939266 -38214616 - MIR SINE MIR -7 255 49 364 253 0 20 chr20 33939736 33939835 -38214047 - MIR SINE MIR -107 155 59 764 282 25 5 chr20 33940061 33940263 -38213619 - MIR SINE MIR -20 242 37 295 308 84 28 chr20 33941553 33941696 -38212186 + MIR SINE MIR 112 262 0 225 208 21 0 chr20 33941890 33941938 -38211944 - MIR SINE MIR -56 152 104 365 121 0 0 chr20 33943120 33943178 -38210704 - AluJ/FLAM SINE Alu -244 58 1 227 325 115 40 chr20 33943343 33943543 -38210339 + MIR SINE MIR 1 215 -47 260 305 144 0 chr20 33944942 33945060 -38208822 + L2 LINE L2 2907 3041 -231 868 335 84 20 chr20 33945459 33945910 -38207972 + L2 LINE L2 2834 3313 0 207 262 16 0 chr20 33946835 33946896 -38206986 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 451 298 13 26 chr20 33947194 33947345 -38206537 + MIR SINE MIR 71 219 -43 692 147 57 62 chr20 33948254 33948431 -38205451 + MER3 DNA MER1_type 1 129 -80 557 276 0 0 chr20 33948488 33948611 -38205271 + L2 LINE L2 3150 3272 0 462 315 31 6 chr20 33948777 33948939 -38204943 - MIR SINE MIR -51 211 46 324 281 11 11 chr20 33949205 33949294 -38204588 + C-rich Low_complexity Low_complexity 3 91 0 285 320 108 54 chr20 33949758 33950055 -38203827 - L3 LINE CR1 -4 1573 1261 742 185 13 9 chr20 33950682 33950997 -38202885 + (TCCA)n Simple_repeat Simple_repeat 1 316 0 701 171 23 0 chr20 33951025 33951200 -38202682 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 744 172 17 0 chr20 33951245 33951419 -38202463 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 371 270 42 20 chr20 33951668 33951889 -38201993 - LTR41 LTR ERVL -6 767 510 495 223 86 29 chr20 33952304 33952479 -38201403 - LTR41 LTR ERVL -588 185 1 940 300 4 12 chr20 33953222 33953472 -38200410 + MIR SINE MIR 3 250 -12 389 280 0 53 chr20 33953495 33953627 -38200255 - MIR3 SINE MIR -47 161 37 455 289 149 38 chr20 33954399 33954742 -38199140 + L2 LINE L2 2933 3313 0 703 245 19 0 chr20 33955123 33955278 -38198604 - MIR3 SINE MIR -37 171 14 230 257 14 40 chr20 33955901 33955975 -38197907 + MIR3 SINE MIR 115 186 -22 265 313 64 18 chr20 33956181 33956383 -38197499 + L2 LINE L2 2994 3296 -17 255 61 0 0 chr20 33956388 33956421 -38197461 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 345 302 8 31 chr20 33957511 33957640 -38196242 - MIR SINE MIR -81 181 56 403 228 65 0 chr20 33957707 33957799 -38196083 + MIR SINE MIR 42 139 -123 344 314 122 45 chr20 33958240 33958527 -38195355 + L2 LINE L2 2862 3170 -102 296 354 7 7 chr20 33958853 33958997 -38194885 + MIR SINE MIR 49 192 -70 459 331 0 0 chr20 33959149 33959297 -38194585 + MER117 DNA MER1_type 40 187 -10 1216 182 9 23 chr20 33959318 33959538 -38194344 + MER20 DNA MER1_type 3 219 0 318 214 48 12 chr20 33959538 33959622 -38194260 - MIR3 SINE MIR -48 160 74 233 374 197 4 chr20 33960004 33960258 -38193624 - L2 LINE L2 -2 3270 2968 576 263 113 0 chr20 33960860 33961020 -38192862 + MER117 DNA MER1_type 1 178 -19 282 208 130 0 chr20 33961094 33961171 -38192711 + MIR SINE MIR 39 125 -83 265 292 0 0 chr20 33961766 33961831 -38192051 + MIR SINE MIR 78 142 -66 255 342 0 0 chr20 33961942 33962029 -38191853 - MIR SINE MIR -61 147 68 264 317 25 8 chr20 33962463 33962583 -38191299 - MIR SINE MIR -92 170 49 235 300 83 42 chr20 33962668 33962788 -38191094 - MIR SINE MIR -114 148 24 182 302 115 0 chr20 33963022 33963118 -38190764 + MIR3 SINE MIR 101 207 -1 213 360 29 0 chr20 33963558 33963730 -38190152 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 334 274 12 0 chr20 33963900 33964068 -38189814 + (TCCA)n Simple_repeat Simple_repeat 3 172 0 228 278 13 7 chr20 33964120 33964271 -38189611 + (TCCA)n Simple_repeat Simple_repeat 3 154 0 432 234 12 136 chr20 33965447 33965672 -38188210 - L2 LINE L2 -174 3098 2900 268 136 0 0 chr20 33966310 33966354 -38187528 + L2 LINE L2 3008 3051 -221 281 303 46 37 chr20 33966360 33966469 -38187413 - MIR SINE MIR 0 262 153 774 224 4 80 chr20 33966542 33966647 -38187235 - MLT1K LTR MaLR -3 585 506 2510 65 0 0 chr20 33966647 33966953 -38186929 - AluY SINE Alu -5 306 1 774 224 4 80 chr20 33966953 33967084 -38186798 - MLT1K LTR MaLR -82 506 367 311 345 43 0 chr20 33967404 33967543 -38186339 + L3 LINE CR1 1382 1526 -51 281 256 0 26 chr20 33967813 33967891 -38185991 + MIR SINE MIR 73 148 -114 184 339 16 0 chr20 33967961 33968023 -38185859 + L2 LINE L2 3182 3244 -28 350 299 49 35 chr20 33968065 33968209 -38185673 - MIR SINE MIR -68 194 49 258 220 33 33 chr20 33968788 33968879 -38185003 - MER117 DNA MER1_type -2 195 105 471 284 102 23 chr20 33969215 33969391 -38184491 + MIR SINE MIR 63 252 -10 348 287 25 11 chr20 33969398 33969554 -38184328 - MIR SINE MIR -27 235 76 754 260 39 6 chr20 33970038 33970219 -38183663 - MIR SINE MIR -12 250 64 454 298 58 23 chr20 33970282 33970453 -38183429 - MIR SINE MIR -43 219 43 * 986 216 4 76 chr20 33970424 33970583 -38183299 + MIR SINE MIR 11 140 -122 5921 146 35 36 chr20 33970583 33971656 -38182226 + MER11C LTR ERVK 1 1071 0 986 216 4 76 chr20 33971656 33971767 -38182115 + MIR SINE MIR 140 257 -5 431 241 0 9 chr20 33972205 33972317 -38181565 - LTR37A LTR ERV1 -77 349 239 354 268 15 52 chr20 33972615 33972784 -38181098 - L1MC4 LINE L1 -1320 7002 1914 302 341 61 37 chr20 33972728 33972892 -38180990 + L1MCa LINE L1 1896 2063 -4363 * 329 307 51 44 chr20 33972810 33972947 -38180935 - L1MC4 LINE L1 -1334 6708 6571 2119 89 31 3 chr20 33974006 33974299 -38179583 + AluSc SINE Alu 1 301 -8 360 0 0 0 chr20 33974407 33974447 -38179435 + (TG)n Simple_repeat Simple_repeat 2 41 0 409 278 56 35 chr20 33974942 33975086 -38178796 + MIR3 SINE MIR 23 169 -39 395 254 56 16 chr20 33975249 33975375 -38178507 - MIR3 SINE MIR -72 136 6 424 224 103 58 chr20 33975696 33975852 -38178030 - MIR SINE MIR -79 183 21 207 327 109 10 chr20 33975949 33976050 -38177832 + MER5B DNA MER1_type 18 128 -50 499 287 79 12 chr20 33976285 33976449 -38177433 + MIR SINE MIR 81 255 -7 658 241 81 66 chr20 33976588 33976681 -38177201 + L1ME2 LINE L1 5598 5688 -482 2128 112 0 0 chr20 33976681 33976968 -38176914 + AluSx SINE Alu 9 295 -17 658 241 81 66 chr20 33976968 33977273 -38176609 + L1ME2 LINE L1 5688 6028 -142 318 215 0 25 chr20 33977285 33977364 -38176518 + L1ME3A LINE L1 6089 6165 -5 284 277 160 27 chr20 33977528 33977716 -38176166 - L2 LINE L2 -82 3190 2978 614 250 118 26 chr20 33977749 33978021 -38175861 + L2 LINE L2 2834 3130 -183 1158 145 0 0 chr20 33978036 33978202 -38175680 - AluSg/x SINE Alu -22 290 125 342 0 0 0 chr20 33978213 33978251 -38175631 + (TA)n Simple_repeat Simple_repeat 1 38 0 2045 103 31 0 chr20 33978252 33978543 -38175339 - AluY SINE Alu -11 300 1 1063 188 74 11 chr20 33978583 33978854 -38175028 + MER33 DNA MER1_type 1 288 -36 333 244 139 35 chr20 33978860 33978975 -38174907 + L2 LINE L2 3187 3313 0 640 303 127 21 chr20 33979992 33980332 -38173550 - L2 LINE L2 -86 3227 2852 296 330 29 10 chr20 33980744 33980847 -38173035 + MIR SINE MIR 39 143 -65 447 279 18 14 chr20 33981824 33981965 -38171917 + MIR SINE MIR 25 167 -56 238 213 0 0 chr20 33981961 33982008 -38171874 - L2 LINE L2 -2 3270 3224 * 252 185 0 141 chr20 33982534 33982626 -38171256 + MIR SINE MIR 40 119 -89 210 274 0 0 chr20 33982630 33982681 -38171201 + L2 LINE L2 2975 3025 -288 376 306 75 8 chr20 33982715 33982849 -38171033 + L2 LINE L2 3150 3292 -21 2131 94 3 0 chr20 33982851 33983139 -38170743 - AluSq SINE Alu -10 303 15 696 126 5 0 chr20 33983140 33983472 -38170410 + CER Satellite Satellite 1 333 -33 473 252 91 0 chr20 33983554 33983728 -38170154 - MIR SINE MIR -6 256 60 493 263 18 0 chr20 33984001 33984115 -38169767 - MIR SINE MIR -96 166 51 366 279 36 0 chr20 33984135 33984246 -38169636 + MIR SINE MIR 148 262 0 329 282 49 58 chr20 33984412 33984723 -38169159 - L2 LINE L2 -165 3107 2803 561 217 115 0 chr20 33984777 33984934 -38168948 - MIR SINE MIR -11 251 77 343 233 17 67 chr20 33986034 33986154 -38167728 + MIR3 SINE MIR 58 171 -37 2164 108 16 0 chr20 33986222 33986529 -38167353 - AluSx SINE Alu 0 312 1 324 0 0 0 chr20 33987002 33987038 -38166844 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 392 309 89 28 chr20 33988275 33988566 -38165316 + MER102b DNA MER1_type 31 339 -2 311 214 111 51 chr20 33988609 33988726 -38165156 + MIR3 SINE MIR 85 208 0 227 316 0 25 chr20 33989574 33989653 -38164229 - L2 LINE L2 -13 3259 3183 191 313 60 0 chr20 33989623 33989706 -38164176 - MIR SINE MIR -97 165 78 * 443 254 106 7 chr20 33989858 33990000 -38163882 + MIR SINE MIR 2 157 -105 200 289 0 0 chr20 33990008 33990053 -38163829 + L2 LINE L2 3210 3254 -18 606 362 0 0 chr20 33990637 33990825 -38163057 - MER117 DNA MER1_type -9 188 1 1576 166 97 0 chr20 33990925 33991203 -38162679 + AluJb SINE Alu 6 310 -2 419 178 22 0 chr20 33991203 33991293 -38162589 + GA-rich Low_complexity Low_complexity 1 92 0 599 284 108 20 chr20 33991868 33992118 -38161764 - Charlie8 DNA MER1_type -2145 272 1 772 302 79 0 chr20 33992129 33992344 -38161538 + MIR SINE MIR 29 260 -2 280 250 60 12 chr20 33992567 33992651 -38161231 - MER117 DNA MER1_type -72 125 38 842 228 73 69 chr20 33993708 33994265 -38159617 - L2 LINE L2 0 3313 2749 365 338 7 7 chr20 33994280 33994419 -38159463 + L2 LINE L2 3132 3270 -2 214 338 0 0 chr20 33995412 33995480 -38158402 + L2 LINE L2 3246 3313 0 209 306 144 59 chr20 33997980 33998251 -38155631 - L2 LINE L2 0 3272 2979 547 248 0 0 chr20 33998612 33998717 -38155165 - MER117 DNA MER1_type -1 196 92 298 313 87 26 chr20 33998784 33998899 -38154983 - MER117 DNA MER1_type -9 188 67 310 321 24 41 chr20 33998916 33999061 -38154821 - MIR SINE MIR -63 145 36 230 246 49 0 chr20 33999101 33999162 -38154720 - L2 LINE L2 -2 3270 3207 285 261 7 43 chr20 33999669 33999807 -38154075 + (TCTCTG)n Simple_repeat Simple_repeat 1 133 0 229 224 0 0 chr20 33999819 33999868 -38154014 - L2 LINE L2 -239 3033 2985 262 270 87 17 chr20 34000002 34000117 -38153765 - MIR SINE MIR -70 138 16 183 80 0 0 chr20 34000287 34000312 -38153570 + (CAGC)n Simple_repeat Simple_repeat 1 25 0 978 157 0 0 chr20 34000314 34000623 -38153259 + (TCCA)n Simple_repeat Simple_repeat 1 309 0 213 224 0 0 chr20 34000625 34000683 -38153199 + CT-rich Low_complexity Low_complexity 1 58 0 210 182 23 0 chr20 34000701 34000745 -38153137 - L2 LINE L2 -1 3271 3227 435 306 30 0 chr20 34000814 34000948 -38152934 + MIR SINE MIR 10 147 -115 477 269 30 0 chr20 34001320 34001454 -38152428 + MIR SINE MIR 110 247 -15 229 195 23 69 chr20 34001461 34001548 -38152334 + L2 LINE L2 2928 3010 -262 212 247 165 0 chr20 34001598 34001683 -38152199 + L2 LINE L2 3105 3203 -69 587 293 95 35 chr20 34001721 34001953 -38151929 - MIR SINE MIR -10 252 7 808 262 4 26 chr20 34001967 34002197 -38151685 - MIR SINE MIR -12 250 27 258 274 46 97 chr20 34002733 34002969 -38150913 - MIR SINE MIR -4 258 22 200 330 101 0 chr20 34003012 34003121 -38150761 - MIR SINE MIR -45 217 98 199 214 114 0 chr20 34003398 34003468 -38150414 - MIR SINE MIR -168 94 17 221 228 35 0 chr20 34004042 34004099 -38149783 - L2 LINE L2 -333 2980 2922 641 212 28 1 chr20 34004227 34004393 -38149489 + L1ME2 LINE L1 5990 6165 -1 336 260 108 64 chr20 34004403 34004607 -38149275 + L1MC4 LINE L1 7829 8041 -1 492 275 44 12 chr20 34004788 34004948 -38148934 - MIR SINE MIR -70 192 28 426 210 0 0 chr20 34006360 34006479 -38147403 + (TGGA)n Simple_repeat Simple_repeat 1 119 0 348 212 23 0 chr20 34006517 34006649 -38147233 + (TGGA)n Simple_repeat Simple_repeat 3 137 0 327 352 21 7 chr20 34006673 34006815 -38147067 + (TGGA)n Simple_repeat Simple_repeat 3 146 0 251 245 0 0 chr20 34007446 34007499 -38146383 - L2 LINE L2 -5 3267 3215 688 267 114 8 chr20 34007524 34007760 -38146122 + MIR SINE MIR 2 262 0 2163 75 7 0 chr20 34007988 34008296 -38145586 - AluSq SINE Alu 0 310 1 264 352 0 0 chr20 34008433 34008521 -38145361 - MIR3 SINE MIR -15 193 106 312 231 16 48 chr20 34008711 34008972 -38144910 + (TGG)n Simple_repeat Simple_repeat 1 252 0 362 259 19 19 chr20 34009723 34009831 -38144051 + MIR SINE MIR 47 154 -108 624 307 9 89 chr20 34009918 34010234 -38143648 - L2 LINE L2 -5 3267 2977 286 279 99 0 chr20 34010302 34010413 -38143469 + L1ME4a LINE L1 5960 6081 -40 511 297 31 73 chr20 34010802 34010837 -38143045 + MIR SINE MIR 1 36 -226 2329 86 0 0 chr20 34010837 34011140 -38142742 + AluSq SINE Alu 1 303 -10 511 297 31 73 chr20 34011140 34011363 -38142519 + MIR SINE MIR 36 248 -14 367 295 148 16 chr20 34012140 34012323 -38141559 + MIR SINE MIR 45 251 -11 879 311 59 14 chr20 34012906 34013327 -38140555 - L1MC4a LINE L1 -1737 6071 5632 372 119 0 0 chr20 34013382 34013441 -38140441 + (CA)n Simple_repeat Simple_repeat 2 60 0 1052 175 0 0 chr20 34013858 34014035 -38139847 + AluJb SINE Alu 136 312 0 208 211 0 0 chr20 34014050 34014088 -38139794 + MIR SINE MIR 106 143 -65 250 306 0 0 chr20 34014175 34014237 -38139645 - L2 LINE L2 -1 3271 3210 540 267 199 14 chr20 34014866 34015087 -38138795 + MIR SINE MIR 1 262 0 276 215 183 0 chr20 34015504 34015597 -38138285 + MIR SINE MIR 33 142 -66 501 258 38 0 chr20 34015722 34015854 -38138028 - MER91C DNA MER1_type 0 140 4 525 254 25 0 chr20 34016142 34016264 -38137618 - MIR SINE MIR -63 145 21 900 218 97 0 chr20 34016625 34016831 -38137051 - MIR SINE MIR 0 262 37 921 239 5 15 chr20 34016890 34017095 -38136787 + MER63A DNA MER1_type 1 203 -7 675 275 73 97 chr20 34017299 34017818 -38136064 - L2 LINE L2 0 3272 2770 392 188 54 9 chr20 34018741 34018853 -38135029 - L1MC4 LINE L1 0 8042 7926 785 207 2 0 chr20 34018866 34019360 -38134522 + (TCCA)n Simple_repeat Simple_repeat 1 495 0 223 225 0 0 chr20 34019360 34019400 -38134482 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 776 176 6 0 chr20 34019409 34019574 -38134308 + (TCCA)n Simple_repeat Simple_repeat 4 169 0 248 51 0 26 chr20 34019580 34019619 -38134263 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 294 237 52 44 chr20 34019619 34019754 -38134128 - L1MC4 LINE L1 -120 7922 7787 1053 241 100 38 chr20 34019768 34020109 -38133773 - MER113 DNA MER1_type? -138 383 22 2210 109 0 3 chr20 34020159 34020463 -38133419 - AluSx SINE Alu 0 312 10 609 278 28 33 chr20 34021021 34021233 -38132649 + MIR SINE MIR 20 230 -32 364 231 77 29 chr20 34021295 34021399 -38132483 + MIR SINE MIR 71 179 -83 2036 134 3 0 chr20 34021941 34022239 -38131643 - AluSx SINE Alu -13 299 1 223 179 299 0 chr20 34022308 34022375 -38131507 - MIR SINE MIR -68 140 54 369 239 34 68 chr20 34022787 34022961 -38130921 + MIR SINE MIR 36 199 -62 186 314 70 12 chr20 34023012 34023098 -38130784 - MIR SINE MIR -7 255 165 188 302 19 0 chr20 34023606 34023659 -38130223 + MIR SINE MIR 66 119 -89 * 397 241 146 36 chr20 34023653 34023790 -38130092 + MIR SINE MIR 48 199 -63 201 344 0 0 chr20 34023832 34023893 -38129989 + MIR SINE MIR 202 262 0 436 252 72 7 chr20 34023940 34024079 -38129803 - L2 LINE L2 -2 3311 3164 576 213 293 16 chr20 34024099 34024127 -38129755 + L2 LINE L2 2688 2707 -606 2138 123 0 0 chr20 34024127 34024428 -38129454 + AluSx SINE Alu 1 301 -11 576 213 293 16 chr20 34024428 34024649 -38129233 + L2 LINE L2 2707 3006 -307 238 149 0 0 chr20 34024650 34024697 -38129185 - Alu SINE Alu -1 298 252 244 298 0 0 chr20 34024708 34024765 -38129117 + L2 LINE L2 3254 3310 -3 355 318 9 28 chr20 34025174 34025385 -38128497 + L2 LINE L2 2828 3034 -238 1374 129 35 129 chr20 34026402 34026712 -38127170 + AluJo SINE Alu 5 285 -27 228 35 0 0 chr20 34026729 34026758 -38127124 + (GGA)n Simple_repeat Simple_repeat 2 30 0 394 355 27 32 chr20 34026772 34026958 -38126924 - MIR SINE MIR -31 231 47 592 277 42 0 chr20 34026981 34027147 -38126735 + MIR SINE MIR 15 187 -75 322 299 0 75 chr20 34027139 34027214 -38126668 - MIR SINE MIR 0 262 202 * 1978 128 27 0 chr20 34027214 34027510 -38126372 - AluJb SINE Alu -8 304 1 322 299 0 75 chr20 34027510 34027581 -38126301 - MIR SINE MIR -60 202 127 182 333 79 9 chr20 34027713 34027827 -38126055 - L2 LINE L2 -237 3035 2914 536 189 5 5 chr20 34028314 34028431 -38125451 - MIR SINE MIR -49 159 43 189 75 38 151 chr20 34028818 34028871 -38125011 - MIR SINE MIR -61 147 101 380 262 56 16 chr20 34029039 34029165 -38124717 + MIR3 SINE MIR 71 201 -7 303 243 17 6 chr20 34029471 34029548 -38124334 - MIR SINE MIR -110 98 32 496 246 72 7 chr20 34029649 34029787 -38124095 - MIR SINE MIR -70 192 46 349 312 28 18 chr20 34029813 34029922 -38123960 - MIR SINE MIR -50 212 103 397 308 101 0 chr20 34029949 34030118 -38123764 - MIR SINE MIR -48 214 29 191 200 100 17 chr20 34030231 34030291 -38123591 + MIR SINE MIR 88 152 -56 314 250 112 72 chr20 34030752 34030904 -38122978 - L1ME4a LINE L1 0 6121 5964 237 331 28 42 chr20 34031493 34031635 -38122247 + MIR3 SINE MIR 33 172 -36 310 235 134 42 chr20 34031676 34031795 -38122087 - MER103 DNA DNA -1 165 36 551 339 56 50 chr20 34031956 34032030 -38121852 - L2 LINE L2 0 3272 3200 1959 112 0 0 chr20 34032030 34032299 -38121583 - AluSx SINE Alu -5 307 39 551 339 56 50 chr20 34032299 34032584 -38121298 - L2 LINE L2 -72 3200 2911 2048 134 7 0 chr20 34032588 34032893 -38120989 + AluSg SINE Alu 1 307 -3 367 104 15 15 chr20 34032899 34032966 -38120916 + (GAAAA)n Simple_repeat Simple_repeat 4 70 0 1958 117 28 7 chr20 34032977 34033096 -38120786 + AluSx SINE Alu 5 120 -192 297 19 19 39 chr20 34033096 34033148 -38120734 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1958 117 28 7 chr20 34033148 34033318 -38120564 + AluSx SINE Alu 120 300 -12 300 239 193 0 chr20 34033689 34033777 -38120105 - MIR SINE MIR -70 192 88 519 246 46 15 chr20 34033791 34033921 -38119961 - L2 LINE L2 -5 3267 3134 259 295 115 0 chr20 34033991 34034075 -38119807 - L1ME4a LINE L1 0 6121 6048 225 108 0 0 chr20 34034075 34034112 -38119770 + (TA)n Simple_repeat Simple_repeat 2 38 0 259 295 115 0 chr20 34034112 34034166 -38119716 - L1ME4a LINE L1 -73 6048 5967 731 259 100 9 chr20 34034203 34034423 -38119459 + MIR SINE MIR 2 241 -21 199 200 22 22 chr20 34034389 34034434 -38119448 + L2 LINE L2 3211 3255 -17 * 305 248 30 30 chr20 34034455 34034556 -38119326 - L1ME4a LINE L1 -399 5722 5622 388 174 147 11 chr20 34034773 34034878 -38119004 + MIR SINE MIR 82 200 -62 210 37 0 0 chr20 34034952 34034979 -38118903 + (CAT)n Simple_repeat Simple_repeat 2 28 0 310 311 77 0 chr20 34035066 34035183 -38118699 - MIR SINE MIR -61 147 53 746 214 19 42 chr20 34035298 34035513 -38118369 + MER20B DNA MER1_type 570 779 -4 584 216 7 13 chr20 34035595 34035748 -38118134 - L1MD2 LINE L1 -13 6346 6195 2367 226 93 15 chr20 34035758 34036363 -38117519 - L1MC4a LINE L1 -159 7649 6982 213 94 0 0 chr20 34036363 34036395 -38117487 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2367 226 93 15 chr20 34036395 34036475 -38117407 - L1MC4a LINE L1 -826 6982 6910 2253 103 0 0 chr20 34036478 34036780 -38117102 - AluSq SINE Alu -11 302 1 668 300 35 35 chr20 34037670 34037897 -38115985 + MIR SINE MIR 20 246 -16 337 276 39 100 chr20 34038318 34038597 -38115285 - L2 LINE L2 -40 3273 3012 264 277 35 7 chr20 34038850 34038991 -38114891 + L2 LINE L2 2514 2658 -656 1690 183 79 40 chr20 34038995 34039449 -38114433 - MER66A LTR ERV1 0 478 94 224 276 119 48 chr20 34039523 34039733 -38114149 + L2 LINE L2 2650 2874 -440 1076 80 0 0 chr20 34039922 34040059 -38113823 + AluSx SINE Alu 1 137 -175 340 222 33 22 chr20 34040059 34040149 -38113733 + LTR30 LTR ERV1 552 642 -80 2468 78 0 18 chr20 34040149 34040480 -38113402 + pTR5 LTR ERV1 66 390 -2048 443 147 0 0 chr20 34040480 34040548 -38113334 + AluS SINE Alu 229 296 -14 6361 105 14 37 chr20 34040548 34040593 -38113289 - LOR1-int LTR ERV1 -5013 3107 3062 10448 27 1 108 chr20 34040593 34042151 -38111731 + SVA Other Other 1 1394 0 6361 105 14 37 chr20 34042151 34043256 -38110626 - LOR1-int LTR ERV1 -5058 3062 1879 2373 69 0 0 chr20 34043256 34043561 -38110321 - AluY SINE Alu -6 305 1 6361 105 14 37 chr20 34043561 34043710 -38110172 - LOR1-int LTR ERV1 -6241 1879 1728 1180 145 0 0 chr20 34043713 34043899 -38109983 + AluSx SINE Alu 119 304 -6 1091 218 242 16 chr20 34044544 34044934 -38108948 - MLT1G3 LTR MaLR 0 530 43 3409 115 21 2 chr20 34044981 34045461 -38108421 - MER41E LTR ERV1 0 512 24 271 258 0 30 chr20 34045662 34045728 -38108154 - MIR3 SINE MIR -41 167 104 1042 269 122 76 chr20 34045788 34046256 -38107626 - MLT1H1 LTR MaLR -18 531 1 267 299 86 37 chr20 34046418 34046686 -38107196 + L1ME4a LINE L1 5841 6121 0 478 323 57 40 chr20 34047056 34047112 -38106770 - MIR SINE MIR -6 256 202 2720 96 3 0 chr20 34047112 34047466 -38106416 + THE1A LTR MaLR 1 355 0 12127 88 4 1 chr20 34047466 34049041 -38104841 + THE1A-int LTR MaLR 1 1580 0 2713 96 3 0 chr20 34049041 34049395 -38104487 + THE1A LTR MaLR 1 355 0 478 323 57 40 chr20 34049395 34049584 -38104298 - MIR SINE MIR -59 203 5 442 278 50 33 chr20 34050366 34050546 -38103336 - MER5A DNA MER1_type -6 183 1 224 262 110 76 chr20 34050546 34050659 -38103223 - MIR3 SINE MIR -57 151 34 228 244 0 0 chr20 34051267 34051312 -38102570 - L2 LINE L2 -2 3311 3267 214 292 143 20 chr20 34051592 34051738 -38102144 - MIR SINE MIR -24 184 14 438 303 37 62 chr20 34051744 34051988 -38101894 - MIR SINE MIR -9 253 16 408 298 10 0 chr20 34052478 34052582 -38101300 - MIR SINE MIR -110 152 48 1705 138 0 4 chr20 34052810 34053078 -38100804 + AluJb SINE Alu 33 299 -13 1266 191 62 4 chr20 34053093 34053349 -38100533 - AluJo SINE Alu -33 279 9 277 235 37 12 chr20 34053368 34053449 -38100433 + Charlie2 DNA MER1_type 223 305 -2477 1363 215 81 53 chr20 34053473 34054004 -38099878 + Charlie2 DNA MER1_type 1900 2445 -417 2153 101 14 40 chr20 34054026 34054211 -38099671 - L1PB1 LINE L1 0 6151 5978 1947 99 0 7 chr20 34054211 34054483 -38099399 - AluSc SINE Alu -39 270 1 2153 101 14 40 chr20 34054483 34054644 -38099238 - L1PB1 LINE L1 -173 5978 5814 2367 72 3 16 chr20 34054695 34055013 -38098869 - L1PB1 LINE L1 -341 5810 5497 1096 299 79 17 chr20 34055046 34055514 -38098368 + L2 LINE L2 2817 3313 0 1060 190 22 105 chr20 34055543 34055701 -38098181 + Charlie2 DNA MER1_type 2468 2581 -281 2231 102 0 13 chr20 34055701 34056016 -38097866 - AluSx SINE Alu -1 311 1 1060 190 22 105 chr20 34056016 34056220 -38097662 + Charlie2 DNA MER1_type 2581 2800 -62 2116 249 58 33 chr20 34056230 34056830 -38097052 + L1ME3A LINE L1 5456 6077 -93 2141 143 13 40 chr20 34056830 34057228 -38096654 - MLT1B LTR MaLR -2 388 2 2116 249 58 33 chr20 34057228 34057317 -38096565 + L1ME3A LINE L1 6077 6162 -8 194 231 0 28 chr20 34058848 34058956 -38094926 + (CA)n Simple_repeat Simple_repeat 1 105 0 262 235 284 0 chr20 34059323 34059425 -38094457 + MIR SINE MIR 14 145 -63 1703 165 7 0 chr20 34059630 34059915 -38093967 + AluSx SINE Alu 1 287 -25 470 265 73 20 chr20 34060359 34060510 -38093372 - MER104 DNA Tc2 -21 159 1 2055 116 0 13 chr20 34060598 34060936 -38092946 - AluSx SINE Alu 0 312 1 1067 284 41 3 chr20 34060947 34061267 -38092615 - L1ME3 LINE L1 -1 6161 5830 820 205 6 0 chr20 34061317 34061478 -38092404 + L1PB4 LINE L1 5940 6101 -55 630 96 0 0 chr20 34061480 34061563 -38092319 - AluS SINE Alu -227 85 3 271 301 0 24 chr20 34062202 34062285 -38091597 - L2 LINE L2 -10 3303 3223 1461 29 0 0 chr20 34063463 34063633 -38090249 - L1PA2 LINE L1 0 6155 5986 14358 158 16 7 chr20 34067339 34071066 -38082816 - L1MA2 LINE L1 -1 7722 3961 3964 152 11 2 chr20 34071313 34071925 -38081957 - L1MA2 LINE L1 -6234 1331 714 2131 104 0 3 chr20 34072151 34072450 -38081432 + AluSx SINE Alu 5 302 -10 572 255 169 9 chr20 34072518 34072749 -38081133 - L1ME3 LINE L1 -295 5826 5559 480 283 12 30 chr20 34072766 34072932 -38080950 - MIR SINE MIR -4 258 96 527 132 11 0 chr20 34073029 34073120 -38080762 + GA-rich Low_complexity Low_complexity 1 92 0 253 260 62 10 chr20 34073167 34073263 -38080619 + L1MC4a LINE L1 6074 6174 -1634 1864 160 7 0 chr20 34073311 34073605 -38080277 + AluJb SINE Alu 5 300 -12 514 203 13 0 chr20 34074517 34074675 -38079207 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 227 254 34 0 chr20 34075061 34075120 -38078762 + L3 LINE CR1 1516 1576 -1 263 312 0 0 chr20 34075129 34075206 -38078676 - Charlie8 DNA MER1_type 0 2417 2341 663 249 156 13 chr20 34075252 34075477 -38078405 - Charlie8 DNA MER1_type -2152 265 9 488 200 310 0 chr20 34075635 34075780 -38078102 - MIR SINE MIR -66 196 7 2253 58 3 14 chr20 34075807 34076125 -38077757 + AluSc SINE Alu 1 309 0 1801 220 58 5 chr20 34076869 34077247 -38076635 - LTR16C LTR ERVL -7 484 87 2028 142 0 0 chr20 34077639 34077949 -38075933 + AluSx SINE Alu 1 310 -2 365 216 72 10 chr20 34078003 34078100 -38075782 - MIR SINE MIR -93 169 67 1205 178 28 0 chr20 34078153 34078366 -38075516 + MER20 DNA MER1_type 1 219 0 274 230 132 69 chr20 34078416 34078590 -38075292 - MIR3 SINE MIR -12 196 12 213 299 73 73 chr20 34079098 34079262 -38074620 + L2 LINE L2 3139 3302 -11 353 302 23 0 chr20 34079293 34079422 -38074460 + (TGGA)n Simple_repeat Simple_repeat 1 132 0 666 148 0 0 chr20 34079428 34079543 -38074339 + (GGGA)n Simple_repeat Simple_repeat 4 118 0 206 272 22 33 chr20 34079571 34079663 -38074219 + GA-rich Low_complexity Low_complexity 1 91 0 * 387 318 24 0 chr20 34079625 34079795 -38074087 + (TGGA)n Simple_repeat Simple_repeat 3 176 0 376 290 5 10 chr20 34080440 34080542 -38073340 + MIR SINE MIR 63 153 -55 503 210 57 32 chr20 34080548 34080705 -38073177 + MER104 DNA Tc2 4 164 -16 2203 90 17 0 chr20 34080818 34081117 -38072765 - AluSx SINE Alu -8 304 1 290 250 216 0 chr20 34081356 34081444 -38072438 + MIR SINE MIR 152 258 -4 449 291 0 14 chr20 34082617 34082758 -38071124 + MIR3 SINE MIR 5 143 -65 2136 144 0 3 chr20 34083371 34083676 -38070206 + AluJb SINE Alu 1 304 -8 183 271 0 100 chr20 34083784 34083854 -38070028 - L3 LINE CR1 -1282 295 233 184 314 57 14 chr20 34084070 34084140 -38069742 + MIR3 SINE MIR 9 81 -127 * 282 329 0 0 chr20 34084136 34084209 -38069673 + MIR SINE MIR 111 183 -79 258 180 0 0 chr20 34084235 34084285 -38069597 + Alu SINE Alu 253 302 0 401 271 0 9 chr20 34084543 34084650 -38069232 + MIR SINE MIR 39 144 -64 198 0 0 0 chr20 34085017 34085039 -38068843 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 446 331 0 0 chr20 34085039 34085172 -38068710 - MIR SINE MIR -32 230 98 258 252 206 0 chr20 34085194 34085301 -38068581 + MIR SINE MIR 29 157 -105 475 307 12 18 chr20 34085355 34085521 -38068361 - MIR SINE MIR -60 202 38 182 322 17 0 chr20 34086431 34086490 -38067392 - MER5A DNA MER1_type -2 187 128 181 254 73 0 chr20 34086442 34086497 -38067385 + MER5A DNA MER1_type 22 80 -109 * 181 268 134 59 chr20 34086565 34086804 -38067078 + L2 LINE L2 1834 2090 -1224 1127 272 81 18 chr20 34086820 34087217 -38066665 + MLT1K LTR MaLR 167 588 0 2331 112 0 0 chr20 34087642 34087945 -38065937 - AluSx SINE Alu -9 303 1 243 286 66 35 chr20 34088021 34088202 -38065680 - MIR SINE MIR -66 142 5 618 315 56 14 chr20 34088209 34088425 -38065457 - MIR SINE MIR -14 248 24 198 342 81 19 chr20 34088666 34088827 -38065055 + L2 LINE L2 3102 3272 0 237 358 73 0 chr20 34088943 34089066 -38064816 - L2 LINE L2 -19 3253 3122 1869 94 4 0 chr20 34089206 34089440 -38064442 + AluSx SINE Alu 2 236 -76 24 0 0 0 chr20 34089448 34089472 -38064410 + AT_rich Low_complexity Low_complexity 1 24 0 948 202 22 6 chr20 34089499 34089682 -38064200 + MIR SINE MIR 13 198 -64 483 246 11 11 chr20 34090155 34090330 -38063552 + CT-rich Low_complexity Low_complexity 4 178 0 276 259 24 12 chr20 34090367 34090452 -38063430 - L2 LINE L2 -1 3271 3186 203 171 0 24 chr20 34091490 34091531 -38062351 + GA-rich Low_complexity Low_complexity 1 40 0 26 0 0 0 chr20 34091626 34091652 -38062230 + AT_rich Low_complexity Low_complexity 1 26 0 2327 110 3 0 chr20 34091672 34091981 -38061901 - AluSq SINE Alu -3 310 1 274 186 43 14 chr20 34091981 34092051 -38061831 - Tigger5 DNA MER2_type -1 2322 2251 264 151 38 0 chr20 34092021 34092074 -38061808 - Tigger5 DNA MER2_type -2268 55 1 * 595 271 17 58 chr20 34092136 34092358 -38061524 - MIR SINE MIR -43 219 7 224 125 0 0 chr20 34092427 34092459 -38061423 - MIR SINE MIR -63 145 114 337 307 44 0 chr20 34093146 34093260 -38060622 + MIR SINE MIR 92 210 -52 452 291 47 0 chr20 34093382 34093530 -38060352 + MIR3 SINE MIR 54 208 0 385 331 96 68 chr20 34094226 34094549 -38059333 - L2 LINE L2 -8 3264 2933 492 285 49 7 chr20 34094557 34094701 -38059181 + MIR SINE MIR 17 166 -96 411 316 130 17 chr20 34095124 34095538 -38058344 - L1MC/D LINE L1 -2093 5715 5255 301 267 13 0 chr20 34095760 34095835 -38058047 - MIR SINE MIR -58 150 75 380 240 20 82 chr20 34095847 34096043 -38057839 - HAL1 LINE L1 -321 2186 2003 1759 148 69 4 chr20 34096081 34096358 -38057524 - AluJb SINE Alu -17 295 1 3733 102 32 7 chr20 34096443 34097038 -38056844 - L1PA8 LINE L1 -1021 5125 4516 7159 67 4 0 chr20 34097038 34098078 -38055804 + L1PA8 LINE L1 5128 6171 -1 337 308 38 45 chr20 34098087 34098220 -38055662 - HAL1 LINE L1 -647 1860 1729 521 352 11 6 chr20 34098389 34098565 -38055317 + MIR SINE MIR 77 253 -9 2280 88 7 0 chr20 34099154 34099468 -38054414 - AluSp SINE Alu 0 316 1 289 335 49 24 chr20 34099473 34099637 -38054245 + MIR SINE MIR 25 192 -70 2171 138 0 0 chr20 34100293 34100590 -38053292 + AluJb SINE Alu 1 297 -15 399 190 245 49 chr20 34100663 34100826 -38053056 + MIR SINE MIR 68 262 0 517 278 98 10 chr20 34101310 34101515 -38052367 + MIR SINE MIR 9 231 -31 771 254 10 0 chr20 34101523 34101720 -38052162 - L1M4 LINE L1 -3559 2587 2389 192 77 0 0 chr20 34101720 34101746 -38052136 + (TAA)n Simple_repeat Simple_repeat 2 27 0 415 313 87 48 chr20 34102305 34102606 -38051276 + L2 LINE L2 2705 3014 -258 408 173 58 122 chr20 34102708 34102736 -38051146 - L2 LINE L2 -1 3271 3243 2249 114 0 3 chr20 34102736 34103035 -38050847 + AluSx SINE Alu 1 298 -14 408 173 58 122 chr20 34103035 34103145 -38050737 - L2 LINE L2 -29 3243 3142 222 312 39 0 chr20 34103337 34103414 -38050468 - L2 LINE L2 -244 3069 2990 336 314 10 0 chr20 34103476 34103578 -38050304 + L2 LINE L2 3169 3271 -1 21 36 0 0 chr20 34104197 34104225 -38049657 + AT_rich Low_complexity Low_complexity 1 28 0 232 310 9 69 chr20 34104334 34104450 -38049432 + MER5A DNA MER1_type 66 174 -15 421 264 36 0 chr20 34104459 34104569 -38049313 + MER5A DNA MER1_type 2 115 -74 2071 141 0 0 chr20 34104812 34105132 -38048750 + AluSx SINE Alu 1 320 0 1951 158 3 6 chr20 34105600 34105911 -38047971 + AluSx SINE Alu 1 310 -2 603 273 0 0 chr20 34105954 34106086 -38047796 - MIR SINE MIR -52 210 79 182 239 39 115 chr20 34106756 34106886 -38046996 + MIR SINE MIR 9 128 -134 322 265 98 23 chr20 34107178 34107310 -38046572 - MIR3 SINE MIR -22 186 45 291 184 0 0 chr20 34107314 34107363 -38046519 - L2 LINE L2 0 3313 3265 472 286 19 19 chr20 34107887 34108048 -38045834 - MIR SINE MIR -72 190 30 202 185 309 25 chr20 34108046 34108127 -38045755 - MIR SINE MIR -121 141 38 * 809 200 98 36 chr20 34108686 34108911 -38044971 + MIR SINE MIR 16 254 -8 821 227 132 40 chr20 34109042 34109346 -38044536 + MLT1J LTR MaLR 10 341 -170 226 270 14 14 chr20 34109470 34109544 -38044338 + MIR SINE MIR 67 140 -68 230 261 0 0 chr20 34109608 34109654 -38044228 - L2 LINE L2 -12 3301 3256 235 244 0 0 chr20 34109654 34109699 -38044183 + MER20 DNA MER1_type 13 57 -162 1552 157 14 27 chr20 34109699 34110049 -38043833 - MER4A LTR ERV1 0 664 261 474 135 34 11 chr20 34110049 34110138 -38043744 - MER4A LTR ERV1 -566 98 8 416 35 17 0 chr20 34110138 34110196 -38043686 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 9880 29 1 204 chr20 34110196 34111911 -38041971 - SVA Other Other -19 1367 1 653 217 50 25 chr20 34111968 34112129 -38041753 + MER20 DNA MER1_type 54 218 -1 2449 63 7 10 chr20 34112130 34112430 -38041452 + AluY SINE Alu 1 299 -12 227 159 0 0 chr20 34112692 34112736 -38041146 + Alu SINE Alu 255 298 -1 2331 88 112 0 chr20 34113507 34113846 -38040036 + MER51B LTR ERV1 1 377 0 2079 109 11 7 chr20 34113964 34114283 -38039599 - AluSx SINE Alu 0 320 1 2470 95 0 0 chr20 34114864 34115170 -38038712 - AluSc SINE Alu -3 306 1 2323 114 7 0 chr20 34115452 34115758 -38038124 + AluSx SINE Alu 1 308 -4 283 307 0 0 chr20 34116034 34116109 -38037773 - MIR SINE MIR -71 137 63 277 283 9 38 chr20 34116287 34116393 -38037489 + L2 LINE L2 2932 3034 -238 237 108 0 0 chr20 34116636 34116673 -38037209 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 892 222 29 64 chr20 34117939 34118349 -38035533 - MLT1A1 LTR MaLR -6 379 5 498 254 29 29 chr20 34118563 34118701 -38035181 + MIR SINE MIR 48 185 -77 200 312 128 9 chr20 34118714 34118823 -38035059 - MIR SINE MIR -102 160 39 200 306 42 0 chr20 34118895 34118967 -38034915 - MIR3 SINE MIR -37 171 97 317 333 89 60 chr20 34119477 34119792 -38034090 - MLT1J LTR MaLR -159 352 29 233 260 39 65 chr20 34119802 34119879 -38034003 + MIR SINE MIR 109 183 -79 267 232 172 20 chr20 34120121 34120220 -38033662 + MIR SINE MIR 32 145 -63 2267 97 7 0 chr20 34120225 34120515 -38033367 + AluSg SINE Alu 1 292 -18 462 350 108 34 chr20 34121128 34121574 -38032308 - L1ME LINE L1 -5591 479 1 615 112 0 22 chr20 34121685 34121935 -38031947 + AluSx SINE Alu 1 300 -10 340 114 0 25 chr20 34121939 34122018 -38031864 + (CAAA)n Simple_repeat Simple_repeat 4 80 0 304 178 122 84 chr20 34122305 34122412 -38031470 + L1ME4a LINE L1 5975 6085 -36 2116 107 7 13 chr20 34122452 34122772 -38031110 + AluSq SINE Alu 1 313 0 435 226 284 26 chr20 34123219 34123409 -38030473 - MIR SINE MIR -12 250 12 272 262 0 0 chr20 34123632 34123707 -38030175 + MIR SINE MIR 75 146 -62 257 226 12 71 chr20 34123714 34123798 -38030084 + MIR3 SINE MIR 109 187 -21 583 221 44 19 chr20 34124196 34124354 -38029528 + L2 LINE L2 2919 3080 -233 183 271 130 79 chr20 34124646 34124823 -38029059 + L2 LINE L2 3122 3307 -6 406 248 30 10 chr20 34125394 34125495 -38028387 + MIR SINE MIR 110 212 -50 1696 258 55 51 chr20 34125632 34126271 -38027611 + L2 LINE L2 2317 2958 -355 1492 145 6 130 chr20 34126271 34126468 -38027414 - AluJo SINE Alu 0 302 165 195 42 0 0 chr20 34126468 34126492 -38027390 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1492 145 6 130 chr20 34126492 34126639 -38027243 - AluJo SINE Alu -137 165 1 1696 258 55 51 chr20 34126639 34126875 -38027007 + L2 LINE L2 2958 3191 -122 215 297 154 11 chr20 34126989 34127080 -38026802 + L2 LINE L2 3210 3313 0 323 256 16 66 chr20 34127345 34127466 -38026416 + MIR SINE MIR 34 148 -60 298 338 58 26 chr20 34127935 34128108 -38025774 + MIR SINE MIR 15 185 -23 1963 130 11 0 chr20 34128627 34128903 -38024979 + AluJb SINE Alu 11 289 -23 301 252 61 17 chr20 34129388 34129503 -38024379 - L1M LINE L1 -971 5388 5269 1656 208 0 10 chr20 34129522 34129815 -38024067 - AluJb SINE Alu -22 290 1 25 0 0 0 chr20 34129816 34129841 -38024041 + AT_rich Low_complexity Low_complexity 1 25 0 233 163 175 25 chr20 34129849 34129929 -38023953 - HAL1b LINE L1 -625 723 632 205 328 152 24 chr20 34130037 34130162 -38023720 - L3 LINE CR1 -1398 179 39 261 297 0 14 chr20 34131077 34131151 -38022731 + MIR SINE MIR 81 153 -109 * 551 324 62 9 chr20 34131145 34131370 -38022512 - MIR SINE MIR 0 262 26 180 0 0 0 chr20 34132105 34132125 -38021757 + (A)n Simple_repeat Simple_repeat 1 20 0 2316 110 0 19 chr20 34132275 34132583 -38021299 - AluSx SINE Alu -10 302 1 233 347 56 0 chr20 34132833 34132905 -38020977 - MIR SINE MIR -113 149 74 714 298 48 20 chr20 34132916 34133164 -38020718 - MIR SINE MIR 0 262 8 1065 316 20 49 chr20 34133515 34134002 -38019880 - L2 LINE L2 0 3313 2841 446 205 235 25 chr20 34134117 34134317 -38019565 + L2 LINE L2 3015 3256 -57 378 381 70 31 chr20 34134304 34134687 -38019195 - L2 LINE L2 -50 3222 2825 * 1482 173 45 6 chr20 34134883 34135195 -38018687 - MER33 DNA MER1_type 0 324 1 274 274 41 0 chr20 34135330 34135403 -38018479 + Charlie8 DNA MER1_type 33 108 -2309 195 280 80 0 chr20 34136154 34136229 -38017653 + MIR3 SINE MIR 76 156 -52 2031 132 0 0 chr20 34136395 34136683 -38017199 - AluSx SINE Alu -24 288 1 339 85 0 0 chr20 34136687 34136734 -38017148 + (T)n Simple_repeat Simple_repeat 1 47 0 470 285 63 8 chr20 34136757 34136937 -38016945 - MIR SINE MIR -63 199 18 314 323 84 6 chr20 34136902 34137069 -38016813 + L2 LINE L2 2756 2935 -379 * 307 206 48 16 chr20 34137907 34137970 -38015912 + MIR SINE MIR 36 100 -162 745 259 64 18 chr20 34138138 34138358 -38015524 + MIR SINE MIR 32 261 -1 331 283 150 0 chr20 34138378 34138498 -38015384 - MER5A DNA MER1_type -1 188 51 332 189 50 47 chr20 34138740 34138846 -38015036 + L1MC4 LINE L1 1996 6982 -1340 232 345 146 6 chr20 34138882 34139047 -38014835 + MER5A DNA MER1_type 2 189 0 755 287 129 32 chr20 34139256 34139667 -38014215 + L2 LINE L2 2863 3313 0 205 283 30 40 chr20 34140017 34140116 -38013766 + MIR3 SINE MIR 62 159 -49 255 252 94 142 chr20 34140159 34140583 -38013299 + L2 LINE L2 2908 3311 -2 201 242 129 0 chr20 34140898 34140960 -38012922 - MIR SINE MIR -74 188 119 925 274 110 43 chr20 34141658 34141839 -38012043 - L2 LINE L2 -423 2891 2724 2182 90 3 10 chr20 34141839 34142140 -38011742 - AluSg SINE Alu -11 299 1 925 274 110 43 chr20 34142140 34142421 -38011461 - L2 LINE L2 -590 2724 2398 337 281 67 59 chr20 34142541 34142676 -38011206 - L2 LINE L2 0 3272 3137 199 304 76 13 chr20 34143363 34143442 -38010440 + MIR SINE MIR 30 113 -95 509 325 57 25 chr20 34143799 34144082 -38009800 - L1ME LINE L1 -339 5782 5491 1584 202 21 9 chr20 34144095 34144422 -38009460 - MLT1B LTR MaLR 0 390 60 513 263 110 59 chr20 34144543 34144577 -38009305 - L1ME LINE L1 -748 5398 5367 2012 127 3 0 chr20 34144577 34144869 -38009013 - AluSx SINE Alu -19 293 1 513 263 110 59 chr20 34144869 34145306 -38008576 - L1ME LINE L1 -779 5367 4903 282 306 110 57 chr20 34145442 34145490 -38008392 - L1ME LINE L1 -1488 4658 4614 1718 139 56 14 chr20 34145490 34145778 -38008104 + AluJo SINE Alu 1 300 -12 2251 82 0 0 chr20 34145781 34146073 -38007809 + AluY SINE Alu 1 292 -19 282 306 110 57 chr20 34146073 34146547 -38007335 - L1ME LINE L1 -1533 4613 4104 305 287 112 39 chr20 34146557 34146814 -38007068 - L1ME LINE L1 -2099 4047 3810 2102 101 0 23 chr20 34146814 34147121 -38006761 - AluSx SINE Alu -12 300 1 305 287 112 39 chr20 34147121 34147505 -38006377 - L1ME LINE L1 -2336 3810 3359 771 264 55 8 chr20 34147716 34147951 -38005931 - MLT1L LTR MaLR -2 613 368 1284 89 0 0 chr20 34148201 34148381 -38005501 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 410 215 0 25 chr20 34148541 34148620 -38005262 + L2 LINE L2 3237 3313 0 283 243 143 0 chr20 34148632 34148702 -38005180 - MIR SINE MIR -76 186 107 188 227 100 73 chr20 34149312 34149422 -38004460 - MIR SINE MIR -66 142 30 512 187 37 37 chr20 34150209 34150316 -38003566 + MIR SINE MIR 47 153 -109 218 255 0 0 chr20 34150703 34150750 -38003132 + CT-rich Low_complexity Low_complexity 2 48 0 253 279 127 57 chr20 34151001 34151511 -38002371 + L2 LINE L2 2345 2980 -292 362 247 43 32 chr20 34151529 34151622 -38002260 - L2 LINE L2 0 3272 3179 206 380 133 0 chr20 34151651 34151764 -38002118 + L2 LINE L2 3133 3260 -12 * 235 240 0 0 chr20 34151762 34151812 -38002070 - L2 LINE L2 -1 3312 3263 263 272 197 27 chr20 34151834 34151981 -38001901 + MIR SINE MIR 20 191 -71 392 360 50 37 chr20 34152223 34152465 -38001417 + MIR SINE MIR 2 246 -16 246 217 14 29 chr20 34152991 34153060 -38000822 - L2 LINE L2 -82 3231 3164 229 271 0 0 chr20 34153586 34153645 -38000237 - L2 LINE L2 -1 3312 3254 260 252 49 49 chr20 34153728 34153851 -38000031 + L2 LINE L2 3150 3272 0 2128 240 67 27 chr20 34153943 34154573 -37999309 + L1ME3A LINE L1 5505 6159 -11 1730 170 0 3 chr20 34154592 34154875 -37999007 + AluJo SINE Alu 1 282 -30 2061 128 3 0 chr20 34155003 34155299 -37998583 + AluSx SINE Alu 1 297 -15 571 291 49 32 chr20 34155426 34155673 -37998209 - MIR SINE MIR -2 260 10 354 294 44 22 chr20 34156294 34156430 -37997452 - MIR SINE MIR -16 246 108 660 142 0 9 chr20 34156446 34156518 -37997364 + L1MB1 LINE L1 6056 6128 -40 1897 132 6 26 chr20 34156518 34156979 -37996903 + AluSx SINE Alu 1 312 0 660 142 0 9 chr20 34156979 34157019 -37996863 + L1MB1 LINE L1 6128 6167 -1 1702 176 10 0 chr20 34157028 34157324 -37996558 + AluJb SINE Alu 1 299 -13 193 326 22 11 chr20 34157434 34157523 -37996359 + MIR SINE MIR 43 132 -76 2160 119 0 3 chr20 34157887 34158190 -37995692 - AluSx SINE Alu -10 302 1 530 277 76 11 chr20 34158505 34158689 -37995193 + L1ME1 LINE L1 5948 6143 -23 374 235 189 30 chr20 34159447 34159579 -37994303 - MIR SINE MIR -81 181 29 360 256 183 55 chr20 34159907 34160126 -37993756 + MIR SINE MIR 2 248 -14 2118 106 7 3 chr20 34160402 34160705 -37993177 + AluSx SINE Alu 1 304 -8 202 294 203 7 chr20 34160870 34161013 -37992869 + MIR SINE MIR 89 259 -3 274 325 83 0 chr20 34161047 34161167 -37992715 + MIR SINE MIR 54 183 -79 418 275 28 0 chr20 34162427 34162536 -37991346 + MIR SINE MIR 35 146 -62 225 290 0 16 chr20 34162944 34163006 -37990876 + MIR3 SINE MIR 96 156 -52 346 302 81 40 chr20 34163095 34163244 -37990638 + MIR SINE MIR 108 262 0 531 45 0 0 chr20 34163550 34163616 -37990266 + (TG)n Simple_repeat Simple_repeat 2 67 0 388 296 128 25 chr20 34164076 34164279 -37989603 - MIR SINE MIR -33 229 6 414 301 80 16 chr20 34164561 34164748 -37989134 + MIR SINE MIR 31 230 -32 332 304 18 0 chr20 34165016 34165128 -37988754 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 284 257 9 92 chr20 34165634 34165781 -37988101 + MIR SINE MIR 15 145 -63 797 158 6 0 chr20 34166195 34166353 -37987529 + (TGGA)n Simple_repeat Simple_repeat 3 161 0 188 301 68 0 chr20 34166467 34166540 -37987342 + MIR3 SINE MIR 82 159 -49 203 244 0 0 chr20 34167242 34167283 -37986599 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 439 292 11 6 chr20 34168467 34168645 -37985237 + (CA)n Simple_repeat Simple_repeat 2 180 0 1688 186 7 0 chr20 34169283 34169573 -37984309 + AluSx SINE Alu 1 292 -20 4342 133 53 1 chr20 34169591 34170293 -37983589 + L1PA15 LINE L1 5428 6165 0 1679 153 0 80 chr20 34170813 34171152 -37982730 + AluJo SINE Alu 1 312 0 393 188 80 36 chr20 34171241 34171353 -37982529 - MIR3 SINE MIR -7 201 85 2602 235 31 20 chr20 34172238 34172873 -37981009 + L1M4 LINE L1 5 646 -5896 913 171 92 22 chr20 34172907 34173285 -37980597 + LTR54B LTR ERV1 1 456 -42 4302 206 55 21 chr20 34173603 34174535 -37979347 - MER70-int LTR ERVL -1114 4540 2715 2007 164 88 35 chr20 34174672 34175105 -37978777 - MSTB2 LTR MaLR 0 457 2 10984 206 45 7 chr20 34175206 34177425 -37976457 - MER70-int LTR ERVL -2299 2724 421 2202 181 45 24 chr20 34178272 34178809 -37975073 + L1M4 LINE L1 851 1398 -5144 2331 59 0 20 chr20 34178817 34179123 -37974759 - AluY SINE Alu -11 300 1 24 0 0 0 chr20 34179134 34179158 -37974724 + AT_rich Low_complexity Low_complexity 1 24 0 195 194 0 42 chr20 34179177 34179249 -37974633 + (TA)n Simple_repeat Simple_repeat 2 70 0 3846 118 16 26 chr20 34179250 34179280 -37974602 - L1MA2 LINE L1 -27 6277 6248 1982 142 0 3 chr20 34179280 34179590 -37974292 - AluSx SINE Alu -3 309 1 3846 118 16 26 chr20 34179590 34180178 -37973704 - L1MA2 LINE L1 -56 6248 5665 3296 224 76 24 chr20 34180177 34180379 -37973503 + L1M4 LINE L1 1392 1582 -5062 * 1718 170 27 0 chr20 34180379 34180679 -37973203 + AluSx SINE Alu 1 308 -4 3296 224 76 24 chr20 34180679 34182335 -37971547 + L1M4 LINE L1 1582 3365 -3279 414 244 56 0 chr20 34182453 34182543 -37971339 + AluS SINE Alu 1 95 -208 655 258 0 40 chr20 34182852 34183046 -37970836 + L1P4 LINE L1 5435 5616 -558 2259 103 0 22 chr20 34183337 34183656 -37970226 + AluSq SINE Alu 1 312 -1 357 259 27 76 chr20 34183747 34183884 -37969998 - L1ME2 LINE L1 -16 6148 6029 1938 147 0 0 chr20 34183884 34184184 -37969698 + AluSx SINE Alu 1 300 -12 357 259 27 76 chr20 34184184 34184309 -37969573 - L1ME2 LINE L1 -135 6029 5899 434 211 32 2 chr20 34184313 34184420 -37969462 + L1MD2 LINE L1 5590 5685 -481 24 0 0 0 chr20 34184434 34184458 -37969424 + GC_rich Low_complexity Low_complexity 1 24 0 2069 132 0 7 chr20 34184480 34184760 -37969122 - AluSx SINE Alu -34 278 1 812 191 32 0 chr20 34184769 34184926 -37968956 + L1MD2 LINE L1 5694 5855 -504 325 326 84 37 chr20 34185064 34185279 -37968603 - L1MDa LINE L1 -6309 231 7 424 314 45 19 chr20 34185345 34185501 -37968381 + HERV16 LTR ERVL 2473 2632 -2364 2058 103 6 32 chr20 34185513 34185534 -37968348 - HSMAR2 DNA Mariner -965 337 317 2133 115 54 3 chr20 34185534 34185830 -37968052 + AluSx SINE Alu 1 311 -1 2058 103 6 32 chr20 34185830 34186149 -37967733 - HSMAR2 DNA Mariner -985 317 6 842 240 15 2 chr20 34186152 34186348 -37967534 - MLT2F LTR ERVL -47 616 183 194 222 79 0 chr20 34186431 34186494 -37967388 + MIR SINE MIR 27 94 -114 2285 71 0 0 chr20 34186535 34186803 -37967079 - AluY SINE Alu -12 299 32 2030 180 118 52 chr20 34187007 34187530 -37966352 - MLT1F1 LTR MaLR 0 567 10 608 266 38 117 chr20 34187829 34188360 -37965522 - MER113 DNA MER1_type? -28 493 5 291 312 0 0 chr20 34188596 34188673 -37965209 - MIR SINE MIR -166 96 20 862 184 11 0 chr20 34188851 34189036 -37964846 + MER53 DNA DNA 2 188 -1 2031 122 64 9 chr20 34189040 34189385 -37964497 + THE1C LTR MaLR 1 364 -11 1491 326 66 34 chr20 34189478 34190228 -37963654 + HERV16 LTR ERVL 3053 3834 -1820 1836 164 17 0 chr20 34190228 34190515 -37963367 + AluJb SINE Alu 1 292 -20 1491 326 66 34 chr20 34190515 34190597 -37963285 + HERV16 LTR ERVL 3834 3912 -1742 1102 343 21 0 chr20 34190595 34191024 -37962858 + HERV16 LTR ERVL 4178 4615 -870 * 2053 209 48 29 chr20 34191065 34191586 -37962296 - MLT1F LTR MaLR -9 533 3 261 336 43 43 chr20 34191955 34192232 -37961650 + HERV16 LTR ERVL 5048 5324 -161 2081 149 10 56 chr20 34192278 34192442 -37961440 - MLT1B LTR MaLR 0 390 220 1321 184 5 119 chr20 34192442 34192854 -37961028 + MLT1A1 LTR MaLR 1 365 0 2081 149 10 56 chr20 34192854 34192963 -37960919 - MLT1B LTR MaLR -170 220 140 2131 142 0 3 chr20 34192963 34193265 -37960617 + AluJb SINE Alu 1 301 -11 2081 149 10 56 chr20 34193265 34193399 -37960483 - MLT1B LTR MaLR -250 140 1 948 269 98 12 chr20 34193466 34193883 -37959999 + LTR16A1 LTR ERVL 5 457 0 2367 107 0 3 chr20 34193974 34194282 -37959600 + AluSx SINE Alu 1 307 -5 2053 135 10 10 chr20 34194292 34194603 -37959279 + AluJo SINE Alu 1 311 -1 326 250 26 142 chr20 34195243 34195475 -37958407 - L1MC5 LINE L1 -35 7926 7722 2121 117 0 0 chr20 34195477 34195751 -37958131 + AluSq SINE Alu 1 274 -39 225 0 0 0 chr20 34195752 34195777 -37958105 + (GA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr20 34195777 34195798 -37958084 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr20 34195921 34195949 -37957933 + (GTTTG)n Simple_repeat Simple_repeat 5 32 0 1488 187 60 8 chr20 34195950 34196218 -37957664 - AluJo SINE Alu -25 287 6 238 286 63 107 chr20 34196261 34196513 -37957369 - L2 LINE L2 -1 3312 3072 367 310 88 12 chr20 34196581 34196752 -37957130 + MIR SINE MIR 71 254 -8 354 357 83 47 chr20 34196841 34197180 -37956702 - L2 LINE L2 -101 3171 2821 2784 216 39 24 chr20 34197250 34197913 -37955969 + L1ME2 LINE L1 5466 6138 -26 292 271 124 6 chr20 34198439 34198616 -37955266 + L1MC4 LINE L1 7836 8033 -9 201 322 27 20 chr20 34198637 34198783 -37955099 - L2 LINE L2 -615 2699 2553 247 198 27 155 chr20 34199865 34199940 -37953942 - MER113 DNA MER1_type? -328 193 155 2462 93 3 0 chr20 34199940 34200252 -37953630 + AluSp SINE Alu 1 313 0 247 198 27 155 chr20 34200252 34200363 -37953519 - MER113 DNA MER1_type? -366 155 31 513 264 20 27 chr20 34200422 34200570 -37953312 + MIR SINE MIR 16 162 -100 2286 115 23 0 chr20 34200624 34200929 -37952953 + AluSx SINE Alu 1 312 0 363 44 0 0 chr20 34201045 34201090 -37952792 + (TG)n Simple_repeat Simple_repeat 1 45 0 321 262 42 77 chr20 34201240 34201408 -37952474 + L2 LINE L2 3150 3311 -2 203 191 0 21 chr20 34202212 34202259 -37951623 - MIR SINE MIR -136 126 81 301 280 9 9 chr20 34202351 34202458 -37951424 + GA-rich Low_complexity Low_complexity 2 108 0 393 250 0 20 chr20 34202681 34203089 -37950793 + C-rich Low_complexity Low_complexity 1 399 0 209 136 0 45 chr20 34203770 34203814 -37950068 + L2 LINE L2 3149 3190 -82 262 273 94 23 chr20 34204139 34204267 -37949615 - L1ME4a LINE L1 -22 6099 5963 24 32 0 0 chr20 34204268 34204299 -37949583 + AT_rich Low_complexity Low_complexity 1 31 0 259 318 23 0 chr20 34204371 34204459 -37949423 - L1ME4a LINE L1 -340 5781 5692 337 258 54 11 chr20 34204641 34204734 -37949148 - MIR3 SINE MIR -45 163 67 303 218 0 0 chr20 34204850 34204905 -37948977 - MER117 DNA MER1_type -47 150 96 374 311 36 9 chr20 34205185 34205345 -37948537 + MIR SINE MIR 3 164 -58 214 186 0 0 chr20 34205348 34205391 -37948491 + MIR SINE MIR 108 150 -112 330 87 0 0 chr20 34205531 34205577 -37948305 + (TC)n Simple_repeat Simple_repeat 1 46 0 249 316 44 0 chr20 34206473 34206587 -37947295 - L2 LINE L2 -277 3036 2918 1739 149 0 44 chr20 34206711 34207007 -37946875 - AluSx SINE Alu -13 299 17 290 308 40 1 chr20 34207051 34207186 -37946696 - MIR SINE MIR -35 173 31 338 279 79 8 chr20 34207929 34208118 -37945764 + MIR3 SINE MIR 3 202 -60 658 242 12 6 chr20 34208297 34208462 -37945420 - MIR SINE MIR -48 214 49 243 346 55 0 chr20 34209318 34209445 -37944437 - L2 LINE L2 -213 3059 2926 702 237 95 14 chr20 34209751 34209962 -37943920 - MIR SINE MIR -6 256 29 488 286 23 0 chr20 34210057 34210190 -37943692 - L2 LINE L2 0 3272 3137 264 59 0 0 chr20 34210533 34210567 -37943315 + (TC)n Simple_repeat Simple_repeat 2 35 0 415 289 65 35 chr20 34210760 34210992 -37942890 - L2 LINE L2 -220 3052 2814 2568 65 0 16 chr20 34211096 34211406 -37942476 + AluY SINE Alu 1 305 -6 707 253 46 6 chr20 34211406 34211580 -37942302 - MIR SINE MIR -5 257 77 207 253 130 55 chr20 34212210 34212356 -37941526 + MIR3 SINE MIR 15 149 -59 492 209 21 2 chr20 34212392 34212566 -37941316 - MER20 DNA MER1_type -7 212 2 666 252 13 0 chr20 34212878 34213036 -37940846 - LTR16C LTR ERVL -37 454 295 287 159 128 141 chr20 34213036 34213236 -37940646 - LTR41 LTR ERVL 0 795 577 646 235 56 0 chr20 34213526 34213688 -37940194 - LTR41 LTR ERVL -586 187 17 798 271 21 5 chr20 34213692 34213880 -37940002 - LTR16C LTR ERVL -192 299 109 186 159 0 188 chr20 34213880 34213949 -37939933 - MIR3 SINE MIR -141 67 12 2438 109 0 0 chr20 34214763 34215076 -37938806 + AluSq SINE Alu 1 313 0 1964 233 184 22 chr20 34215742 34216553 -37937329 - L2 LINE L2 -338 2976 2035 252 293 85 12 chr20 34216809 34216891 -37936991 - MIR3 SINE MIR -27 181 94 314 298 111 18 chr20 34217110 34217281 -37936601 + MIR SINE MIR 65 251 -11 360 233 78 9 chr20 34217425 34217541 -37936341 + MIR3 SINE MIR 56 179 -29 1820 198 35 21 chr20 34217876 34218306 -37935576 + MER63B DNA MER1_type 1 436 0 2282 118 0 3 chr20 34218580 34218886 -37934996 - AluSx SINE Alu -6 306 2 1680 176 10 20 chr20 34219220 34219526 -37934356 + AluJb SINE Alu 1 303 -9 726 280 12 32 chr20 34270380 34270630 -37883252 + MIR SINE MIR 5 249 -13 1736 166 4 0 chr20 34271475 34271752 -37882130 + AluJb SINE Alu 13 290 -22 613 256 156 0 chr20 34271799 34271979 -37881903 - MIR SINE MIR -7 255 48 242 259 105 31 chr20 34271971 34272133 -37881749 - L2 LINE L2 -315 2998 2825 * 200 355 8 16 chr20 34272461 34272582 -37881300 + L2 LINE L2 2715 2834 -480 296 321 48 36 chr20 34272615 34272780 -37881102 + L2 LINE L2 2933 3099 -173 930 286 100 30 chr20 34272888 34273328 -37880554 + L2 LINE L2 2843 3313 0 318 278 9 26 chr20 34273823 34273938 -37879944 + Charlie8 DNA MER1_type 29 141 -2276 325 203 0 76 chr20 34273943 34274022 -37879860 - MLT1C LTR MaLR 0 467 395 1522 192 7 3 chr20 34274023 34274310 -37879572 + AluJb SINE Alu 4 291 -21 1885 144 0 0 chr20 34274329 34274614 -37879268 + AluSx SINE Alu 14 298 -14 900 160 90 0 chr20 34274632 34274788 -37879094 + FAM SINE Alu 5 174 -1 307 239 78 0 chr20 34275082 34275184 -37878698 - MIR SINE MIR -59 149 49 344 287 69 0 chr20 34275605 34275706 -37878176 - MIR SINE MIR -67 141 34 315 281 8 70 chr20 34275798 34275883 -37877999 + MIR SINE MIR 66 142 -120 2153 114 3 0 chr20 34275883 34276182 -37877700 + AluSx SINE Alu 1 300 -12 315 281 8 70 chr20 34276182 34276224 -37877658 + MIR SINE MIR 142 185 -77 496 303 78 78 chr20 34276309 34276408 -37877474 - Charlie8 DNA MER1_type -1926 491 393 2117 127 0 3 chr20 34276408 34276716 -37877166 - AluSx SINE Alu -5 307 1 496 303 78 78 chr20 34276716 34277015 -37876867 - Charlie8 DNA MER1_type -2023 394 93 2163 117 3 0 chr20 34277305 34277614 -37876268 - AluSx SINE Alu -2 310 1 617 293 15 15 chr20 34277783 34277981 -37875901 + MIR SINE MIR 46 243 -19 366 314 11 29 chr20 34278087 34278117 -37875765 + GA-rich Low_complexity Low_complexity 2 31 -142 1981 109 7 0 chr20 34278117 34278391 -37875491 + AluSx SINE Alu 5 280 -32 366 314 11 29 chr20 34278391 34278535 -37875347 + GA-rich Low_complexity Low_complexity 31 173 0 770 299 18 5 chr20 34278838 34279059 -37874823 + MIR SINE MIR 35 258 -4 362 293 34 0 chr20 34279335 34279461 -37874421 - MIR SINE MIR -62 146 22 1005 136 6 19 chr20 34279580 34279742 -37874140 + AluSg/x SINE Alu 121 280 -32 267 309 25 0 chr20 34280178 34280259 -37873623 + MIR SINE MIR 148 230 -32 516 228 107 7 chr20 34280382 34280531 -37873351 - MIR SINE MIR -77 185 22 894 234 73 5 chr20 34280618 34280836 -37873046 - MIR SINE MIR -27 235 3 378 209 23 0 chr20 34280868 34280954 -37872928 - MIR SINE MIR -87 121 34 2197 130 51 23 chr20 34281203 34281557 -37872325 - THE1B LTR MaLR 0 364 1 825 127 0 8 chr20 34282688 34282806 -37871076 + AluY SINE Alu 3 119 -192 533 208 145 44 chr20 34282947 34283106 -37870776 - MER5B DNA MER1_type -3 175 1 1246 159 53 0 chr20 34283445 34283653 -37870229 - MER20 DNA MER1_type 0 219 1 1898 159 10 0 chr20 34283839 34284134 -37869748 - AluSx SINE Alu -14 298 1 601 224 46 57 chr20 34284721 34284939 -37868943 + MIR SINE MIR 39 250 -12 294 29 0 0 chr20 34284947 34284982 -37868900 + (TGGA)n Simple_repeat Simple_repeat 4 38 0 516 290 161 0 chr20 34285850 34286043 -37867839 + MIR SINE MIR 28 251 -11 263 270 54 0 chr20 34286460 34286571 -37867311 - AluSg/x SINE Alu 0 300 184 506 279 173 0 chr20 34286626 34286805 -37867077 + MIR SINE MIR 47 256 -6 2287 118 0 3 chr20 34286893 34287197 -37866685 - AluJb SINE Alu -9 303 1 226 269 111 19 chr20 34287882 34287990 -37865892 - L3 LINE CR1 -216 1361 1244 448 250 0 66 chr20 34288057 34288193 -37865689 - MER117 DNA MER1_type -29 168 42 252 263 54 36 chr20 34289008 34289195 -37864687 - L2 LINE L2 -296 2976 2776 1493 249 74 3 chr20 34289567 34289945 -37863937 - MLT1K LTR MaLR -4 584 180 342 220 91 55 chr20 34290089 34290216 -37863666 - MIR SINE MIR -58 150 30 252 292 44 18 chr20 34290800 34290913 -37862969 + Charlie8 DNA MER1_type 156 271 -2146 460 183 148 9 chr20 34290988 34291103 -37862779 + L2 LINE L2 3183 3313 0 1201 103 13 0 chr20 34291470 34291626 -37862256 - AluSq SINE Alu -155 158 1 2224 112 0 0 chr20 34291650 34291937 -37861945 - AluSg SINE Alu -23 287 1 311 257 20 50 chr20 34291940 34292041 -37861841 + L1MEd LINE L1 562 659 -5460 256 26 53 0 chr20 34292101 34292139 -37861743 + MER41A LTR ERV1 401 440 -114 835 136 0 0 chr20 34292146 34292264 -37861618 + FLAM_C SINE Alu 1 118 -25 2145 94 0 4 chr20 34292285 34292562 -37861320 - AluSc SINE Alu -13 296 21 189 175 0 0 chr20 34292676 34292716 -37861166 + (CA)n Simple_repeat Simple_repeat 2 41 0 2527 82 0 0 chr20 34292898 34293204 -37860678 - AluY SINE Alu -3 308 3 442 288 47 6 chr20 34293207 34293377 -37860505 + Charlie8 DNA MER1_type 86 262 -2155 408 257 19 34 chr20 34293888 34294063 -37859819 + MIR SINE MIR 3 166 -51 332 235 148 0 chr20 34294627 34294742 -37859140 + MIR SINE MIR 22 153 -55 249 57 0 0 chr20 34294800 34294835 -37859047 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 943 282 41 12 chr20 34294837 34295181 -37858701 - L2 LINE L2 -15 3298 2945 304 75 0 0 chr20 34295181 34295221 -37858661 - MSTA LTR MaLR -1 427 388 1567 107 0 0 chr20 34295221 34295417 -37858465 + AluSq SINE Alu 1 196 -117 2443 116 58 0 chr20 34295552 34295930 -37857952 - MSTA LTR MaLR -28 400 1 569 209 3 23 chr20 34296053 34296404 -37857478 + (CA)n Simple_repeat Simple_repeat 1 344 0 936 108 0 32 chr20 34296416 34296602 -37857280 + (CA)n Simple_repeat Simple_repeat 1 180 0 416 300 20 0 chr20 34296627 34296727 -37857155 + L2 LINE L2 3169 3270 -2 275 252 130 65 chr20 34296839 34296962 -37856920 + L2 LINE L2 3141 3271 -1 374 325 0 9 chr20 34297025 34297139 -37856743 + MIR SINE MIR 48 160 -102 524 268 56 51 chr20 34297765 34298006 -37855876 + MIR SINE MIR 2 253 -9 309 138 69 0 chr20 34298774 34298832 -37855050 + Alu SINE Alu 237 298 -4 907 137 0 0 chr20 34299126 34299250 -37854632 + FLAM_C SINE Alu 1 124 -19 258 262 167 13 chr20 34299498 34299735 -37854147 - MER102a DNA MER1_type 0 330 58 304 215 63 0 chr20 34299738 34299817 -37854065 - LTR16C LTR ERVL 0 491 408 300 268 71 18 chr20 34299940 34300052 -37853830 + L2 LINE L2 3136 3253 -19 366 211 40 0 chr20 34300115 34300191 -37853691 - MIR SINE MIR -87 121 43 202 150 25 0 chr20 34301342 34301382 -37852500 - MIR SINE MIR -116 146 106 410 268 121 32 chr20 34301445 34301602 -37852280 - MIR SINE MIR -76 186 16 327 234 13 0 chr20 34302006 34302083 -37851799 + MIR SINE MIR 72 149 -113 2127 90 0 60 chr20 34302093 34302414 -37851468 + AluSg SINE Alu 1 303 0 416 301 30 0 chr20 34302946 34303079 -37850803 - MER91C DNA MER1_type -3 137 1 269 310 94 29 chr20 34303104 34303275 -37850607 - L2 LINE L2 0 3272 3091 888 129 18 0 chr20 34305321 34305491 -37848391 + (TGGA)n Simple_repeat Simple_repeat 3 175 0 712 111 17 44 chr20 34305512 34305693 -37848189 + (TGGA)n Simple_repeat Simple_repeat 2 177 0 476 271 75 45 chr20 34306048 34306140 -37847742 + L1ME4a LINE L1 5585 5673 -448 2473 84 13 10 chr20 34306140 34306451 -37847431 + AluSx SINE Alu 1 312 0 476 271 75 45 chr20 34306451 34306624 -37847258 + L1ME4a LINE L1 5673 5858 -263 1739 191 0 10 chr20 34306692 34306991 -37846891 + AluJb SINE Alu 1 296 -16 247 270 87 48 chr20 34306993 34307119 -37846763 + L1ME4a LINE L1 5990 6120 -1 775 318 59 27 chr20 34307172 34307326 -37846556 - L2 LINE L2 -76 3237 3089 2087 130 7 0 chr20 34307326 34307619 -37846263 + AluSx SINE Alu 1 295 -17 775 318 59 27 chr20 34307619 34307979 -37845903 - L2 LINE L2 -224 3089 2705 618 128 0 0 chr20 34307984 34308078 -37845804 - FLAM_A SINE Alu -11 131 38 189 268 54 0 chr20 34308377 34308433 -37845449 - MIR SINE MIR -98 164 106 253 265 186 10 chr20 34308591 34308693 -37845189 + MIR SINE MIR 39 158 -104 253 65 0 43 chr20 34308697 34308743 -37845139 + (GGA)n Simple_repeat Simple_repeat 2 45 0 1963 149 21 0 chr20 34309362 34309651 -37844231 + AluSx SINE Alu 1 295 -17 778 251 24 10 chr20 34309900 34310107 -37843775 - MIR SINE MIR -44 218 3 1358 167 53 18 chr20 34310188 34310416 -37843466 + AluJo SINE Alu 65 300 -12 2061 148 3 0 chr20 34311741 34312039 -37841843 - AluJb SINE Alu -13 299 1 186 253 48 24 chr20 34312128 34312211 -37841671 + L2 LINE L2 2708 2792 -522 428 326 142 35 chr20 34312326 34312611 -37841271 + L2 LINE L2 2839 3187 -126 2011 145 20 0 chr20 34312611 34312907 -37840975 + AluSx SINE Alu 1 302 -10 428 326 142 35 chr20 34312907 34313050 -37840832 + L2 LINE L2 3187 3313 0 236 297 42 42 chr20 34313138 34313256 -37840626 + MIR3 SINE MIR 42 159 -49 190 319 134 17 chr20 34313616 34313735 -37840147 + L2 LINE L2 3181 3313 0 2223 133 0 0 chr20 34313804 34314113 -37839769 + AluSx SINE Alu 1 309 -3 2268 128 0 0 chr20 34314391 34314687 -37839195 - AluY SINE Alu -15 296 1 226 318 18 71 chr20 34314767 34314937 -37838945 + L2 LINE L2 2899 3059 -213 2145 107 35 0 chr20 34315214 34315503 -37838379 + AluSq SINE Alu 1 299 -14 2231 119 7 0 chr20 34315805 34316099 -37837783 + AluSx SINE Alu 1 296 -16 769 252 8 57 chr20 34316132 34316394 -37837488 - LTR43 LTR ERV1 -178 424 176 1269 163 0 33 chr20 34317360 34317575 -37836307 - AluJb SINE Alu -20 292 85 849 117 0 0 chr20 34317663 34317774 -37836108 + AluSq/x SINE Alu 1 111 -201 2056 98 0 4 chr20 34318393 34318658 -37835224 + AluSg SINE Alu 41 304 -6 291 263 31 106 chr20 34318659 34318819 -37835063 - MER91B DNA MER1_type -39 151 4 387 325 30 6 chr20 34319213 34319382 -37834500 - MER5A DNA MER1_type -2 187 15 348 164 0 0 chr20 34320119 34320186 -37833696 - Alu SINE Alu 0 302 236 2566 63 0 0 chr20 34321639 34321942 -37831940 + AluY SINE Alu 1 303 -8 1961 151 0 35 chr20 34322227 34322544 -37831338 - AluJo SINE Alu -6 306 1 2054 145 0 10 chr20 34322552 34322856 -37831026 - AluSx SINE Alu -11 301 1 1852 172 3 3 chr20 34323085 34323381 -37830501 + AluJb SINE Alu 1 296 -16 234 62 0 0 chr20 34323384 34323416 -37830466 + (CA)n Simple_repeat Simple_repeat 2 33 0 1791 167 28 3 chr20 34324159 34324446 -37829436 + AluJb SINE Alu 1 294 -18 390 242 40 24 chr20 34324464 34324588 -37829294 - MIR SINE MIR -19 243 118 180 233 122 56 chr20 34324928 34325018 -37828864 + L2 LINE L2 3218 3313 0 2220 103 27 3 chr20 34325670 34325962 -37827920 + AluSg SINE Alu 1 299 -11 2214 114 7 13 chr20 34326322 34326630 -37827252 + AluSq SINE Alu 1 306 -7 2223 136 0 0 chr20 34326989 34327299 -37826583 - AluSx SINE Alu -2 310 1 318 278 54 108 chr20 34327590 34327717 -37826165 - MIR SINE MIR -12 250 141 2395 88 0 31 chr20 34327717 34328037 -37825845 + AluSx SINE Alu 1 310 -2 318 278 54 108 chr20 34328037 34328150 -37825732 - MIR SINE MIR -121 141 23 2195 107 7 13 chr20 34328297 34328597 -37825285 - AluSq SINE Alu -11 302 5 1842 171 0 13 chr20 34329003 34329312 -37824570 - AluJo SINE Alu -7 305 1 2214 115 3 13 chr20 34329330 34329642 -37824240 - AluSx SINE Alu -1 311 3 226 278 0 111 chr20 34330833 34330959 -37822923 - L2 LINE L2 -2 3311 3200 209 274 0 0 chr20 34331068 34331119 -37822763 + GA-rich Low_complexity Low_complexity 1 51 0 204 179 0 0 chr20 34331131 34331170 -37822712 + GA-rich Low_complexity Low_complexity 1 39 0 928 293 38 54 chr20 34332261 34332763 -37821119 + L1MEc LINE L1 38 531 -5865 2386 106 0 0 chr20 34332927 34333228 -37820654 + AluSx SINE Alu 1 301 -11 1328 290 102 26 chr20 34333258 34333995 -37819887 + L1MEc LINE L1 1202 1994 -4402 2626 195 55 10 chr20 34334198 34334798 -37819084 + L1MC4 LINE L1 7284 7910 -132 1731 171 3 13 chr20 34334876 34335180 -37818702 + AluJo SINE Alu 9 309 -3 311 261 61 35 chr20 34335181 34335296 -37818586 + L1MC5 LINE L1 7533 7650 -311 320 183 78 123 chr20 34335325 34335441 -37818441 + L1MC5 LINE L1 7640 7760 -201 2339 97 0 3 chr20 34335441 34335739 -37818143 - AluSg1 SINE Alu -12 297 1 320 183 78 123 chr20 34335739 34335822 -37818060 + L1MC5 LINE L1 7760 7845 -116 2410 92 3 0 chr20 34335822 34336126 -37817756 - AluSp SINE Alu -8 305 1 1550 169 41 69 chr20 34336128 34336447 -37817435 - AluJb SINE Alu -1 311 2 320 183 78 123 chr20 34336447 34336512 -37817370 + L1MC5 LINE L1 7846 7893 -68 2323 115 0 10 chr20 34336512 34336824 -37817058 - AluSx SINE Alu -3 309 1 320 183 78 123 chr20 34336824 34336862 -37817020 + L1MC5 LINE L1 7893 7931 -30 592 314 66 4 chr20 34336884 34337110 -37816772 + MIR SINE MIR 22 261 -1 2287 122 0 0 chr20 34337287 34337590 -37816292 + AluSx SINE Alu 1 303 -9 2110 104 38 10 chr20 34337590 34337878 -37816004 + AluSg SINE Alu 1 296 -14 286 182 0 15 chr20 34337878 34337944 -37815938 + L1MC4a LINE L1 4411 4475 -1671 628 128 0 0 chr20 34337955 34338041 -37815841 + FLAM_A SINE Alu 20 105 -37 815 254 61 11 chr20 34338513 34338792 -37815090 + L1MC4a LINE L1 5641 5933 -1875 545 276 201 0 chr20 34339230 34339404 -37814478 - MIR SINE MIR 0 262 54 1440 162 8 64 chr20 34339546 34339811 -37814071 - AluJb SINE Alu -14 298 49 2387 90 7 0 chr20 34339842 34340142 -37813740 + AluSp SINE Alu 1 302 -11 1991 106 0 4 chr20 34340148 34340404 -37813478 + AluSc SINE Alu 39 293 -16 2496 70 0 19 chr20 34340453 34340766 -37813116 + AluY SINE Alu 1 307 -4 674 250 14 0 chr20 34340890 34341034 -37812848 + AluJo SINE Alu 6 151 -161 21 0 0 0 chr20 34341514 34341535 -37812347 + AT_rich Low_complexity Low_complexity 1 21 0 1776 168 3 3 chr20 34342271 34342557 -37811325 + AluJb SINE Alu 9 294 -18 384 280 26 16 chr20 34342563 34342686 -37811196 - MIR SINE MIR -62 146 52 2071 122 21 3 chr20 34342757 34343043 -37810839 + AluSx SINE Alu 1 291 -21 1145 140 4 123 chr20 34344167 34344402 -37809480 - AluJb SINE Alu -14 298 92 336 24 0 0 chr20 34344402 34344443 -37809439 + (TG)n Simple_repeat Simple_repeat 1 41 0 230 65 0 0 chr20 34344443 34344474 -37809408 - Alu SINE Alu -182 120 90 264 59 0 0 chr20 34344474 34344508 -37809374 + (TG)n Simple_repeat Simple_repeat 2 35 0 236 62 0 0 chr20 34344551 34344583 -37809299 - Alu SINE Alu -182 120 89 638 194 0 40 chr20 34344593 34344717 -37809165 - AluJb SINE Alu -192 120 2 182 212 0 0 chr20 34345121 34345154 -37808728 + L2 LINE L2 3268 3300 -13 321 234 0 0 chr20 34345242 34345306 -37808576 - L2 LINE L2 -2 3270 3207 2074 123 34 0 chr20 34345825 34346117 -37807765 - AluSx SINE Alu -10 302 1 811 153 0 89 chr20 34346146 34346303 -37807579 + FLAM_C SINE Alu 1 143 0 257 163 225 0 chr20 34346303 34346383 -37807499 + L1M4 LINE L1 5179 5276 -870 2482 106 0 0 chr20 34346383 34346695 -37807187 + AluSx SINE Alu 1 312 0 185 300 0 20 chr20 34346897 34346947 -37806935 - L2 LINE L2 -25 3247 3199 1003 136 105 5 chr20 34346949 34347140 -37806742 - Tigger1 DNA MER2_type -1 2417 2208 1281 211 21 39 chr20 34347143 34347310 -37806572 - AluJo SINE Alu -30 282 120 2135 118 26 16 chr20 34347310 34347615 -37806267 + AluSg SINE Alu 1 308 -2 1281 211 21 39 chr20 34347615 34347726 -37806156 - AluJo SINE Alu -192 120 9 2873 97 0 83 chr20 34347726 34348210 -37805672 + Tigger1 DNA MER2_type 1255 1698 -720 748 80 0 0 chr20 34348216 34348316 -37805566 - Tigger1 DNA MER2_type -1238 1180 1081 743 186 0 0 chr20 34348318 34348436 -37805446 + FLAM_C SINE Alu 2 119 -24 6314 121 20 55 chr20 34348450 34348904 -37804978 - Tigger1 DNA MER2_type -1326 1092 624 2260 129 0 10 chr20 34348904 34349215 -37804667 - AluSx SINE Alu -4 308 1 6314 121 20 55 chr20 34349215 34349868 -37804014 - Tigger1 DNA MER2_type -1794 624 24 357 215 133 82 chr20 34349886 34350044 -37803838 - MIR SINE MIR -82 180 15 1239 169 24 127 chr20 34350222 34350553 -37803329 - AluYb8 SINE Alu -21 297 1 344 328 116 15 chr20 34351072 34351270 -37802612 + L1ME LINE L1 5585 5802 -319 259 230 118 22 chr20 34351270 34351405 -37802477 + L1MC5 LINE L1 7265 7412 -549 1539 142 106 4 chr20 34351490 34351736 -37802146 - AluJb SINE Alu -11 301 31 438 256 64 8 chr20 34351737 34351927 -37801955 + L1MC4 LINE L1 7643 7953 -89 2100 107 10 3 chr20 34351985 34352275 -37801607 + AluSg SINE Alu 1 292 -18 1121 181 68 106 chr20 34352319 34352676 -37801206 - L1MD3 LINE L1 -5 8037 7708 1991 132 3 7 chr20 34352676 34352992 -37800890 - AluSx SINE Alu 0 315 1 1121 181 68 106 chr20 34352992 34353082 -37800800 - L1MD3 LINE L1 -334 7708 7616 668 163 21 7 chr20 34353124 34353265 -37800617 + L1MD3 LINE L1 7713 7855 -140 644 185 0 0 chr20 34353265 34353384 -37800498 - FLAM_C SINE Alu -2 141 23 344 131 0 0 chr20 34353426 34353487 -37800395 + L1MD3 LINE L1 7934 7994 -1 2243 132 0 0 chr20 34353663 34353974 -37799908 + AluSq SINE Alu 1 311 -2 1017 167 0 0 chr20 34353980 34354163 -37799719 + AluSg/x SINE Alu 134 316 0 2188 104 3 41 chr20 34354163 34354448 -37799434 + AluSq SINE Alu 1 274 -39 198 0 0 0 chr20 34354448 34354470 -37799412 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2188 104 3 41 chr20 34354470 34354502 -37799380 + AluSq SINE Alu 274 306 -7 514 232 62 108 chr20 34354504 34354589 -37799293 + L1MC5 LINE L1 7703 7790 -171 1843 94 15 49 chr20 34354589 34354722 -37799160 + AluSq SINE Alu 1 122 -191 2436 78 3 7 chr20 34354722 34355028 -37798854 + AluSp SINE Alu 1 305 -8 1843 94 15 49 chr20 34355028 34355159 -37798723 + AluSq SINE Alu 122 256 -57 514 232 62 108 chr20 34355159 34355314 -37798568 + L1MC5 LINE L1 7790 7932 -29 1923 167 3 3 chr20 34355893 34356198 -37797684 + AluJo SINE Alu 1 305 -7 372 297 165 24 chr20 34356525 34356737 -37797145 - MIR SINE MIR -13 249 8 2394 87 7 0 chr20 34357337 34357635 -37796247 - AluSc SINE Alu -9 300 1 766 209 35 55 chr20 34358026 34358227 -37795655 - MER58A DNA MER1_type 0 224 28 1823 155 38 14 chr20 34358256 34358547 -37795335 + AluJb SINE Alu 1 298 -14 2259 103 3 7 chr20 34359059 34359359 -37794523 + AluSp SINE Alu 1 299 -14 553 159 0 0 chr20 34359651 34359739 -37794143 + L1MB3 LINE L1 5682 5769 -414 521 77 26 0 chr20 34359780 34359858 -37794024 + (TCTCCC)n Simple_repeat Simple_repeat 4 83 0 6082 69 20 23 chr20 34359858 34361157 -37792725 + SVA Other Other 1 1047 -339 2095 128 28 33 chr20 34361228 34361270 -37792612 + L1MB3 LINE L1 5790 5831 -352 2055 133 13 3 chr20 34361270 34361572 -37792310 + AluJb SINE Alu 1 305 -7 2095 128 28 33 chr20 34361572 34361918 -37791964 + L1MB3 LINE L1 5831 6176 -7 1898 174 16 7 chr20 34362246 34362551 -37791331 + AluJo SINE Alu 1 308 -4 730 148 59 47 chr20 34362569 34362738 -37791144 + MER3 DNA MER1_type 30 200 -9 2168 87 56 0 chr20 34362818 34363105 -37790777 + AluSp SINE Alu 1 303 -10 188 261 76 33 chr20 34363186 34363278 -37790604 - MIR SINE MIR -12 250 155 1654 83 4 50 chr20 34363613 34363854 -37790028 - MER30 DNA MER1_type 0 230 1 2273 114 3 0 chr20 34364143 34364441 -37789441 - AluSg SINE Alu -11 299 1 647 206 80 17 chr20 34364446 34364621 -37789261 - AluJo SINE Alu -7 305 120 329 248 157 33 chr20 34365018 34365139 -37788743 + MIR SINE MIR 119 254 -8 2218 109 36 10 chr20 34365411 34365715 -37788167 - AluSx SINE Alu 0 312 1 844 192 0 6 chr20 34365734 34365890 -37787992 - FRAM SINE Alu -2 174 20 590 162 95 20 chr20 34365909 34366057 -37787825 - L1MB3 LINE L1 -41 6142 5984 1810 167 31 0 chr20 34366589 34366877 -37787005 + AluJo SINE Alu 1 297 -15 2304 92 20 3 chr20 34366994 34367297 -37786585 + AluSx SINE Alu 1 308 -4 1398 158 5 0 chr20 34367661 34367863 -37786019 - AluJb SINE Alu -109 203 1 693 228 114 35 chr20 34368367 34368569 -37785313 - MIR SINE MIR -4 258 41 663 310 80 5 chr20 34368632 34368845 -37785037 - MIR SINE MIR -32 230 2 2030 155 3 0 chr20 34368973 34369270 -37784612 + AluSq SINE Alu 1 298 -15 752 267 22 50 chr20 34369328 34369479 -37784403 + L1MC/D LINE L1 5549 5690 -2118 2022 137 7 3 chr20 34369479 34369772 -37784110 + AluSx SINE Alu 6 299 -13 752 267 22 50 chr20 34369772 34369897 -37783985 + L1MC/D LINE L1 5690 5817 -1991 2003 168 3 0 chr20 34369908 34370212 -37783670 + AluJo SINE Alu 1 305 -7 246 311 139 87 chr20 34370502 34370868 -37783014 + L2 LINE L2 2861 3245 -27 1624 163 55 76 chr20 34370874 34371013 -37782869 - MER1B DNA MER1_type -2373 337 197 1676 151 3 74 chr20 34371013 34371324 -37782558 + AluJb SINE Alu 7 295 -17 1624 163 55 76 chr20 34371324 34371528 -37782354 - MER1B DNA MER1_type -2513 197 1 389 269 105 24 chr20 34371633 34371846 -37782036 + MIR SINE MIR 18 250 -12 1349 110 0 6 chr20 34371909 34372091 -37781791 + AluSg/x SINE Alu 114 294 -18 361 275 198 6 chr20 34372091 34372258 -37781624 + MIR SINE MIR 24 222 -40 699 315 16 20 chr20 34372338 34372589 -37781293 - MIR SINE MIR -10 252 3 509 165 32 205 chr20 34372887 34373201 -37780681 + MER33 DNA MER1_type 14 254 -2331 1451 144 4 32 chr20 34373201 34373451 -37780431 - AluJb SINE Alu -69 243 1 509 165 32 205 chr20 34373451 34373512 -37780370 + MER33 DNA MER1_type 254 324 0 929 271 115 34 chr20 34373514 34374009 -37779873 + L2 LINE L2 2217 2751 -563 2003 158 0 3 chr20 34374010 34374313 -37779569 + AluJb SINE Alu 1 302 -10 2436 89 0 16 chr20 34374314 34374627 -37779255 + AluSg SINE Alu 1 308 -2 214 314 29 0 chr20 34374655 34374725 -37779157 + L2 LINE L2 2750 2821 -493 2141 108 7 14 chr20 34374728 34375023 -37778859 - AluSx SINE Alu -19 293 1 923 136 15 0 chr20 34375024 34375156 -37778726 - AluSq/x SINE Alu -178 134 1 1249 126 0 0 chr20 34375304 34375471 -37778411 - AluSg/x SINE Alu -6 304 138 1015 262 128 9 chr20 34375472 34375816 -37778066 + L2 LINE L2 2929 3313 0 986 173 26 58 chr20 34375826 34375868 -37778014 - LTR16C LTR ERVL 0 491 449 2256 112 0 0 chr20 34375868 34376162 -37777720 - AluSx SINE Alu -18 294 1 986 173 26 58 chr20 34376162 34376345 -37777537 - LTR16C LTR ERVL -42 449 273 1846 187 124 21 chr20 34376345 34376779 -37777103 + MLT2B1 LTR ERVL 1 479 -41 1873 157 0 17 chr20 34376787 34376924 -37776958 + AluJb SINE Alu 1 139 -173 1750 142 30 17 chr20 34376924 34377226 -37776656 + AluSx SINE Alu 1 306 -6 1873 157 0 17 chr20 34377226 34377387 -37776495 + AluJb SINE Alu 139 294 -18 1180 145 0 0 chr20 34377586 34377752 -37776130 - AluSg/x SINE Alu -16 296 131 2365 106 0 3 chr20 34377756 34378067 -37775815 - AluSx SINE Alu -1 311 2 1795 103 60 4 chr20 34378157 34378409 -37775473 + AluSx SINE Alu 29 294 -18 3033 157 71 15 chr20 34378560 34379094 -37774788 + MLT1F1 LTR MaLR 4 567 0 461 173 244 31 chr20 34380476 34380603 -37773279 + MER53 DNA DNA 36 189 0 1700 147 0 15 chr20 34380734 34380895 -37772987 - AluSx SINE Alu -19 293 136 2226 103 20 0 chr20 34380895 34381197 -37772685 - AluSx SINE Alu -4 308 1 1700 147 0 15 chr20 34381197 34381294 -37772588 - AluSx SINE Alu -176 136 39 1409 244 109 9 chr20 34381754 34382176 -37771706 + L2 LINE L2 2839 3302 -11 234 170 38 132 chr20 34382257 34382363 -37771519 + MIR SINE MIR 23 118 -90 702 314 122 29 chr20 34382547 34383296 -37770586 + L2 LINE L2 2352 3182 -90 431 175 91 71 chr20 34383344 34383498 -37770384 - MIR3 SINE MIR -11 197 41 2002 117 57 0 chr20 34384278 34384559 -37769323 - AluSg SINE Alu -13 297 1 1038 104 0 0 chr20 34384561 34384695 -37769187 - AluSq/x SINE Alu -179 134 1 1743 162 3 42 chr20 34384912 34385221 -37768661 + AluJo SINE Alu 1 297 -15 2489 84 3 7 chr20 34385227 34385537 -37768345 + AluSp SINE Alu 5 313 0 1940 153 0 10 chr20 34385577 34385878 -37768004 + AluSx SINE Alu 1 298 -14 493 297 41 41 chr20 34385964 34386230 -37767652 + MLT1J LTR MaLR 239 504 -7 363 356 6 6 chr20 34386378 34386538 -37767344 + (CA)n Simple_repeat Simple_repeat 2 161 0 1085 164 24 53 chr20 34386639 34386765 -37767117 + AluSg SINE Alu 1 120 -190 2057 112 10 41 chr20 34386765 34387079 -37766803 + AluSx SINE Alu 1 304 -8 1085 164 24 53 chr20 34387079 34387159 -37766723 + AluSg SINE Alu 120 201 -109 2124 115 7 0 chr20 34387099 34387387 -37766495 + AluSq SINE Alu 9 298 -15 620 247 53 68 chr20 34387714 34387787 -37766095 + MIR SINE MIR 68 141 -121 2038 113 0 28 chr20 34387787 34387923 -37765959 + AluSx SINE Alu 1 139 -170 2214 112 10 3 chr20 34387923 34388227 -37765655 + AluSx SINE Alu 1 306 -6 2038 113 0 28 chr20 34388227 34388407 -37765475 + AluSx SINE Alu 139 309 0 620 247 53 68 chr20 34388407 34388522 -37765360 + MIR SINE MIR 141 254 -8 243 284 32 11 chr20 34388626 34388721 -37765161 - MIR3 SINE MIR -22 186 90 201 226 75 0 chr20 34388851 34388904 -37764978 - L2 LINE L2 -18 3295 3239 445 183 0 0 chr20 34389451 34389522 -37764360 + MLT1J LTR MaLR 78 148 -363 1242 174 64 0 chr20 34389522 34389741 -37764141 - AluJb SINE Alu -11 301 69 2390 106 0 0 chr20 34389776 34390077 -37763805 + AluSx SINE Alu 1 301 -11 1939 142 28 3 chr20 34390085 34390373 -37763509 + AluSx SINE Alu 1 295 -17 794 252 112 28 chr20 34390906 34391174 -37762708 + MLT1L LTR MaLR 27 271 -344 2382 109 0 0 chr20 34391174 34391478 -37762404 - AluSx SINE Alu -8 304 1 794 252 112 28 chr20 34391478 34391698 -37762184 + MLT1L LTR MaLR 271 615 0 2285 115 0 13 chr20 34391952 34392266 -37761616 + AluSx SINE Alu 1 310 -2 1162 180 0 0 chr20 34392273 34392456 -37761426 + AluJb SINE Alu 129 311 -1 463 244 8 38 chr20 34392465 34392585 -37761297 + MIR SINE MIR 31 148 -114 2360 106 3 3 chr20 34392585 34392897 -37760985 + AluSp SINE Alu 1 312 -1 2214 130 0 3 chr20 34392929 34393237 -37760645 + AluJo SINE Alu 1 307 -5 2476 82 3 3 chr20 34393416 34393722 -37760160 + AluSc SINE Alu 2 307 -2 1408 160 102 51 chr20 34393753 34394028 -37759854 + AluJb SINE Alu 1 289 -23 380 315 84 29 chr20 34394129 34394367 -37759515 + L2 LINE L2 3012 3262 -10 352 264 18 98 chr20 34395137 34395288 -37758594 + L2 LINE L2 3131 3270 -43 2412 103 3 0 chr20 34395288 34395600 -37758282 + AluSp SINE Alu 1 313 0 352 264 18 98 chr20 34395600 34395611 -37758271 + L2 LINE L2 3270 3280 -33 1393 138 21 129 chr20 34395647 34395785 -37758097 + AluJo SINE Alu 1 152 -150 1683 182 11 4 chr20 34395785 34396060 -37757822 - AluJb SINE Alu -26 286 10 1393 138 21 129 chr20 34396060 34396095 -37757787 + AluJo SINE Alu 152 189 -113 2276 92 0 7 chr20 34396095 34396388 -37757494 + AluSc SINE Alu 1 291 -18 1393 138 21 129 chr20 34396388 34396539 -37757343 + AluJo SINE Alu 189 291 -11 1897 170 0 7 chr20 34396638 34396944 -37756938 + AluJb SINE Alu 1 304 -8 347 198 19 66 chr20 34396975 34397050 -37756832 + MIR SINE MIR 72 142 -120 2088 121 0 55 chr20 34397050 34397380 -37756502 + AluSx SINE Alu 1 312 0 347 198 19 66 chr20 34397380 34397410 -37756472 + MIR SINE MIR 142 172 -90 2403 86 0 7 chr20 34397427 34397728 -37756154 + AluSx SINE Alu 1 299 -13 2295 103 30 0 chr20 34397740 34398040 -37755842 + AluSx SINE Alu 1 309 -3 2026 143 17 3 chr20 34398047 34398341 -37755541 + AluJb SINE Alu 3 300 -12 21 0 0 0 chr20 34398344 34398365 -37755517 + AT_rich Low_complexity Low_complexity 1 21 0 260 272 160 8 chr20 34398469 34398594 -37755288 + MIR SINE MIR 1 144 -118 229 327 118 13 chr20 34398873 34399026 -37754856 + L1MC/D LINE L1 5591 5759 -2049 418 208 17 50 chr20 34399041 34399161 -37754721 + L2 LINE L2 3156 3271 -1 921 189 6 0 chr20 34399174 34399333 -37754549 - FAM SINE Alu -9 40 1 2104 130 0 31 chr20 34399385 34399707 -37754175 + AluJb SINE Alu 1 312 0 921 188 7 7 chr20 34399841 34399995 -37753887 - FRAM SINE Alu -18 158 5 24 0 0 0 chr20 34400054 34400078 -37753804 + AT_rich Low_complexity Low_complexity 1 24 0 1745 163 3 37 chr20 34400233 34400413 -37753469 - AluJo SINE Alu -16 296 111 2013 156 10 0 chr20 34400413 34400721 -37753161 + AluSx SINE Alu 1 311 -1 2066 111 76 0 chr20 34400724 34401012 -37752870 + AluSp SINE Alu 1 310 -3 1745 163 3 37 chr20 34401012 34401122 -37752760 - AluJo SINE Alu -203 109 12 1363 155 0 19 chr20 34401122 34401335 -37752547 - AluJb SINE Alu -17 295 87 2330 88 44 0 chr20 34401635 34401930 -37751952 - AluSx SINE Alu -4 308 1 2351 95 0 3 chr20 34402020 34402315 -37751567 + AluSx SINE Alu 2 295 -17 1922 147 3 14 chr20 34402329 34402614 -37751268 + AluJb SINE Alu 1 282 -30 555 230 120 11 chr20 34402663 34402819 -37751063 + MIR SINE MIR 32 214 -48 2490 71 0 3 chr20 34402819 34403116 -37750766 + AluSx SINE Alu 1 296 -16 555 230 120 11 chr20 34403116 34403150 -37750732 + MIR SINE MIR 214 243 -19 263 349 56 8 chr20 34403818 34403944 -37749938 - L2 LINE L2 -6 3307 3176 1405 190 77 0 chr20 34403950 34404224 -37749658 + AluJo SINE Alu 4 298 -14 2281 116 0 0 chr20 34404289 34404583 -37749299 - AluSx SINE Alu -18 294 1 2354 100 0 10 chr20 34404611 34404920 -37748962 - AluSq SINE Alu -7 306 1 366 263 53 9 chr20 34405920 34406034 -37747848 - MER117 DNA MER1_type -29 168 50 842 144 0 15 chr20 34406055 34406187 -37747695 - FLAM_C SINE Alu 0 133 4 251 282 82 18 chr20 34406218 34406328 -37747554 - MIR3 SINE MIR -44 164 48 2434 81 7 7 chr20 34406335 34406643 -37747239 - AluSx SINE Alu -4 308 1 2051 115 21 3 chr20 34406667 34406954 -37746928 + AluSx SINE Alu 1 292 -20 189 321 99 8 chr20 34406977 34407108 -37746774 + L2 LINE L2 3169 3311 -2 2543 65 3 0 chr20 34407264 34407572 -37746310 + AluY SINE Alu 1 309 -2 1853 153 43 13 chr20 34407911 34408032 -37745850 + AluJb SINE Alu 1 117 -195 2435 76 7 16 chr20 34408032 34408335 -37745547 + AluSg SINE Alu 1 300 -10 2328 105 0 0 chr20 34408335 34408629 -37745253 + AluSg SINE Alu 1 295 -15 1853 153 43 13 chr20 34408629 34408807 -37745075 + AluJb SINE Alu 116 310 -2 190 54 27 27 chr20 34408859 34408896 -37744986 + (TTTTA)n Simple_repeat Simple_repeat 5 41 0 192 319 0 0 chr20 34409211 34409283 -37744599 - MIR SINE MIR -71 137 66 2185 148 3 0 chr20 34409372 34409676 -37744206 + AluSx SINE Alu 3 307 -5 500 304 24 1 chr20 34409863 34410038 -37743844 - MIR SINE MIR -58 150 3 1801 146 45 0 chr20 34410582 34410849 -37743033 + AluJb SINE Alu 10 288 -24 348 74 0 0 chr20 34410993 34411047 -37742835 + L1MA3 LINE L1 6252 6305 0 1996 129 0 71 chr20 34411056 34411189 -37742693 + AluSx SINE Alu 3 144 -168 2308 107 3 16 chr20 34411189 34411506 -37742376 + AluSq SINE Alu 1 313 0 1996 129 0 71 chr20 34411506 34411525 -37742357 + AluSx SINE Alu 144 163 -149 2231 110 3 7 chr20 34411525 34411848 -37742034 + AluSq SINE Alu 1 313 0 1996 129 0 71 chr20 34411848 34412020 -37741862 + AluSx SINE Alu 163 305 -7 1077 152 12 0 chr20 34412020 34412184 -37741698 + AluSg/x SINE Alu 132 297 -13 662 304 74 0 chr20 34412441 34412671 -37741211 - MIR SINE MIR 0 262 16 391 229 50 43 chr20 34412691 34412831 -37741051 - MIR3 SINE MIR -34 174 34 333 229 127 0 chr20 34413094 34413212 -37740670 + MIR3 SINE MIR 75 207 -1 542 288 45 6 chr20 34413392 34413569 -37740313 + MIR SINE MIR 51 234 -28 231 260 180 0 chr20 34413920 34414020 -37739862 - MIR SINE MIR -111 151 34 25 31 0 0 chr20 34414746 34414778 -37739104 + GC_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr20 34414896 34414928 -37738954 + GC_rich Low_complexity Low_complexity 1 32 0 912 144 72 0 chr20 34415548 34415701 -37738181 + AluJb SINE Alu 138 301 -11 540 229 18 29 chr20 34416079 34416256 -37737626 + MIR SINE MIR 30 203 -59 642 191 95 0 chr20 34416390 34416516 -37737366 + AluJb SINE Alu 136 273 -39 385 256 73 22 chr20 34416525 34416662 -37737220 - MIR SINE MIR -115 147 4 2367 94 0 25 chr20 34416877 34417195 -37736687 + AluSg SINE Alu 1 310 0 1369 186 57 0 chr20 34417285 34417532 -37736350 + AluJo SINE Alu 40 300 -12 200 118 0 29 chr20 34417537 34417571 -37736311 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 247 245 0 0 chr20 34418009 34418062 -37735820 + (TG)n Simple_repeat Simple_repeat 1 53 0 1290 146 5 5 chr20 34418338 34418537 -37735345 + AluSx SINE Alu 1 199 -113 480 59 15 0 chr20 34418537 34418605 -37735277 + AluSc SINE Alu 65 133 -176 2414 71 3 10 chr20 34418606 34418902 -37734980 + AluY SINE Alu 1 294 -17 1565 114 0 0 chr20 34419091 34419301 -37734581 - AluSq SINE Alu 0 313 104 1431 115 0 10 chr20 34419305 34419505 -37734377 + AluSg/x SINE Alu 100 297 -13 910 90 0 0 chr20 34419506 34419617 -37734265 - AluSq SINE Alu -201 111 1 2245 123 3 0 chr20 34419638 34419938 -37733944 - AluSx SINE Alu -11 301 1 506 259 39 15 chr20 34420010 34420215 -37733667 - L1MEd LINE L1 -5003 1116 907 2375 92 0 48 chr20 34420216 34420395 -37733487 - AluSg SINE Alu -9 301 115 219 36 0 0 chr20 34420395 34420423 -37733459 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2161 107 0 4 chr20 34420423 34420703 -37733179 - AluSg SINE Alu -31 279 1 2375 92 0 48 chr20 34420703 34420838 -37733044 - AluSg SINE Alu -193 117 1 2247 80 0 10 chr20 34420880 34421168 -37732714 - AluSx SINE Alu -17 295 11 2295 119 0 3 chr20 34421281 34421592 -37732290 - AluSx SINE Alu -2 310 1 501 154 9 45 chr20 34421592 34421691 -37732191 - AluJo/FRAM SINE Alu -17 295 199 1553 175 90 65 chr20 34421691 34421908 -37731974 - MER66A LTR ERV1 -9 469 333 2020 128 31 7 chr20 34421908 34422196 -37731686 - AluSx SINE Alu -17 295 1 1553 175 90 65 chr20 34422196 34422436 -37731446 - MER66A LTR ERV1 -145 333 100 466 121 0 0 chr20 34422521 34422587 -37731295 - AluJ/FLAM SINE Alu -233 79 14 2525 67 0 0 chr20 34422658 34422956 -37730926 + AluY SINE Alu 1 298 -13 835 136 0 0 chr20 34422977 34423095 -37730787 - FLAM_C SINE Alu -25 118 1 256 26 53 0 chr20 34423102 34423140 -37730742 - MER41A LTR ERV1 -114 440 401 496 282 69 111 chr20 34423200 34423304 -37730578 - L1MEd LINE L1 -5460 659 552 2224 112 0 0 chr20 34423304 34423591 -37730291 + AluSg SINE Alu 1 287 -23 496 282 69 111 chr20 34423591 34423615 -37730267 - L1MEd LINE L1 -5567 552 529 2161 116 3 0 chr20 34423615 34423920 -37729962 + AluSq SINE Alu 1 306 0 496 282 69 111 chr20 34423920 34424082 -37729800 - L1MEd LINE L1 -5590 529 388 2295 124 3 0 chr20 34424082 34424388 -37729494 - AluSx SINE Alu -5 307 1 496 282 69 111 chr20 34424388 34424526 -37729356 - L1MEd LINE L1 -5731 388 246 2170 117 0 26 chr20 34424531 34424839 -37729043 + AluSg SINE Alu 1 300 -10 2443 74 0 3 chr20 34424839 34425135 -37728747 + AluY SINE Alu 1 295 -16 1995 155 3 10 chr20 34425147 34425451 -37728431 + AluSx SINE Alu 1 302 -10 839 200 0 32 chr20 34425488 34425673 -37728209 + AluJo SINE Alu 120 298 -14 2521 68 0 0 chr20 34425677 34425973 -37727909 + AluY SINE Alu 1 296 -15 2218 97 14 3 chr20 34425976 34426266 -37727616 + AluSx SINE Alu 1 293 -19 239 303 62 22 chr20 34426399 34426577 -37727305 - L2 LINE L2 -1065 2249 2065 2157 108 13 16 chr20 34426777 34427084 -37726798 + AluSq SINE Alu 3 308 -5 1451 123 9 0 chr20 34427243 34427454 -37726428 - AluSg SINE Alu -95 215 3 249 26 0 0 chr20 34427463 34427502 -37726380 - Alu SINE Alu 0 302 264 1659 179 47 3 chr20 34427502 34427799 -37726083 - AluJb SINE Alu -1 311 2 1005 215 13 18 chr20 34428160 34428324 -37725558 - AluJo SINE Alu 0 312 148 2414 92 7 0 chr20 34428324 34428628 -37725254 - AluSx SINE Alu -6 306 1 1005 215 13 18 chr20 34428628 34428691 -37725191 - AluJo SINE Alu -164 148 86 825 135 0 0 chr20 34428886 34428997 -37724885 + AluSq/x SINE Alu 5 115 -198 2129 90 0 14 chr20 34428998 34429132 -37724750 + AluSc SINE Alu 1 135 -174 2581 46 0 13 chr20 34429132 34429436 -37724446 + AluY SINE Alu 1 300 -11 2129 90 0 14 chr20 34429436 34429578 -37724304 + AluSc SINE Alu 135 273 -36 258 210 16 0 chr20 34429579 34429641 -37724241 - AluSp/q SINE Alu -8 295 233 1818 85 0 8 chr20 34429741 34429976 -37723906 - AluSg1 SINE Alu -76 233 1 2224 101 17 3 chr20 34429978 34430265 -37723617 - AluSx SINE Alu -21 291 1 356 302 17 34 chr20 34430291 34430428 -37723454 + MIR SINE MIR 19 152 -62 202 288 91 0 chr20 34430615 34430681 -37723201 - L2 LINE L2 -6 3307 3236 1558 208 20 3 chr20 34431049 34431180 -37722702 + AluJb SINE Alu 5 132 -180 2369 88 3 13 chr20 34431180 34431486 -37722396 + AluSx SINE Alu 1 303 -9 1558 208 20 3 chr20 34431486 34431652 -37722230 + AluJb SINE Alu 132 307 -5 1125 149 11 21 chr20 34432070 34432258 -37721624 + AluJb SINE Alu 110 295 -17 351 269 58 0 chr20 34432260 34432364 -37721518 + MIR SINE MIR 81 190 -72 1064 82 15 0 chr20 34432372 34432507 -37721375 + AluSx SINE Alu 1 137 -175 2498 72 0 13 chr20 34432507 34432814 -37721068 + AluY SINE Alu 1 303 -8 2267 121 0 0 chr20 34432817 34433124 -37720758 + AluSg SINE Alu 1 307 -3 181 340 38 0 chr20 34433142 34433195 -37720687 + L2 LINE L2 3210 3264 -8 674 225 49 2 chr20 34433294 34433477 -37720405 + MIR SINE MIR 4 192 -50 210 231 0 0 chr20 34433509 34433548 -37720334 + (CTA)n Simple_repeat Simple_repeat 2 40 0 1076 116 0 0 chr20 34433702 34433848 -37720034 + AluSx SINE Alu 141 286 -26 584 244 23 0 chr20 34433857 34433988 -37719894 - MER5A DNA MER1_type -55 134 1 216 67 0 0 chr20 34434241 34434271 -37719611 + (CA)n Simple_repeat Simple_repeat 2 31 0 1821 170 0 0 chr20 34434771 34435053 -37718829 + AluJb SINE Alu 1 282 -30 2172 143 0 0 chr20 34435053 34435353 -37718529 - AluSx SINE Alu -12 300 1 1907 140 16 29 chr20 34435384 34435691 -37718191 + AluSq SINE Alu 1 303 -10 2046 111 4 0 chr20 34435691 34435961 -37717921 + AluY SINE Alu 1 272 -39 452 133 12 0 chr20 34435961 34436044 -37717838 + GA-rich Low_complexity Low_complexity 1 84 0 474 18 0 0 chr20 34436044 34436099 -37717783 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 339 306 148 14 chr20 34436132 34436348 -37717534 - MIR SINE MIR -16 246 2 281 321 121 0 chr20 34437151 34437316 -37716566 + L1MC/D LINE L1 5587 5771 -2037 237 327 0 67 chr20 34437366 34437470 -37716412 + MER110A LTR ERV1 74 170 -298 2301 95 14 0 chr20 34437595 34437891 -37715991 - AluSx SINE Alu -12 300 1 1320 157 0 14 chr20 34437893 34438103 -37715779 - AluJo SINE Alu -19 293 87 1847 140 53 0 chr20 34438112 34438397 -37715485 - AluSp SINE Alu -13 300 1 2328 103 0 10 chr20 34438414 34438725 -37715157 - AluSx SINE Alu -4 308 1 1391 119 10 5 chr20 34438838 34439040 -37714842 + AluSq SINE Alu 33 235 -78 2207 121 3 0 chr20 34439081 34439370 -37714512 + AluSx SINE Alu 7 296 -16 1506 149 4 4 chr20 34439384 34439612 -37714270 + AluSx SINE Alu 14 241 -71 2256 119 7 0 chr20 34439636 34439938 -37713944 + AluSx SINE Alu 5 308 -4 2116 102 10 3 chr20 34439938 34440231 -37713651 + AluSq SINE Alu 1 295 -18 279 79 0 0 chr20 34440231 34440269 -37713613 + (TA)n Simple_repeat Simple_repeat 2 39 0 327 259 163 30 chr20 34440470 34440553 -37713329 - MIR SINE MIR 0 262 191 1464 153 127 8 chr20 34440553 34440821 -37713061 - AluSg SINE Alu -10 300 1 327 259 163 30 chr20 34440821 34440903 -37712979 - MIR SINE MIR -71 191 75 581 210 59 0 chr20 34441343 34441462 -37712420 + AluJo SINE Alu 117 242 -70 429 241 134 43 chr20 34441663 34441850 -37712032 - MIR SINE MIR 0 262 59 1666 199 22 22 chr20 34442042 34442353 -37711529 + AluJo SINE Alu 1 311 -1 2297 120 3 0 chr20 34442609 34442918 -37710964 - AluSg SINE Alu 0 310 1 1706 97 0 44 chr20 34442923 34443171 -37710711 - AluSc SINE Alu 0 309 73 1355 146 0 10 chr20 34443353 34443558 -37710324 + AluSg/x SINE Alu 80 282 -30 842 161 40 81 chr20 34443605 34443631 -37710251 - FAM SINE Alu -141 170 144 2175 141 0 0 chr20 34443631 34443929 -37709953 + AluSx SINE Alu 1 298 -14 842 161 40 81 chr20 34443929 34444076 -37709806 - FAM SINE Alu -167 144 4 488 265 230 20 chr20 34444335 34444539 -37709343 + L2 LINE L2 2973 3219 -94 1112 115 0 19 chr20 34444539 34444696 -37709186 - FRAM SINE Alu -7 169 16 23 0 0 0 chr20 34444702 34444725 -37709157 + AT_rich Low_complexity Low_complexity 1 23 0 1979 138 0 3 chr20 34444728 34445043 -37708839 + AluSx SINE Alu 1 314 0 260 272 98 132 chr20 34445252 34445403 -37708479 + L2 LINE L2 2996 3134 -138 1669 201 0 0 chr20 34445403 34445686 -37708196 - AluJb SINE Alu -23 289 7 260 272 98 132 chr20 34445686 34445821 -37708061 + L2 LINE L2 3134 3272 0 2015 156 3 3 chr20 34445998 34446306 -37707576 + AluSx SINE Alu 1 308 -4 311 182 23 45 chr20 34446390 34446478 -37707404 - MER58 DNA MER1_type -2194 226 141 350 304 17 9 chr20 34446578 34446693 -37707189 + MIR SINE MIR 84 199 -63 260 305 247 0 chr20 34447392 34447546 -37706336 + MIR SINE MIR 71 262 0 2012 123 26 32 chr20 34447586 34447720 -37706162 + AluSg SINE Alu 1 134 -176 2472 80 6 10 chr20 34447720 34448033 -37705849 + AluSq SINE Alu 1 312 -1 2012 123 26 32 chr20 34448033 34448208 -37705674 + AluSg SINE Alu 134 308 -2 813 184 162 0 chr20 34448210 34448389 -37705493 - MER3 DNA MER1_type -1 208 1 340 203 0 13 chr20 34448513 34448592 -37705290 - Tigger7 DNA MER2_type -7 2480 2403 1105 295 127 34 chr20 34449134 34449548 -37704334 + L2 LINE L2 2325 2699 -614 1702 170 35 14 chr20 34449548 34449677 -37704205 + AluJo SINE Alu 1 126 -186 2402 92 0 0 chr20 34449677 34449972 -37703910 + AluSg SINE Alu 1 295 -15 1702 170 35 14 chr20 34449972 34450125 -37703757 + AluJo SINE Alu 126 289 -23 1105 295 127 34 chr20 34450125 34450390 -37703492 + L2 LINE L2 2699 2938 -375 2507 76 3 0 chr20 34450390 34450693 -37703189 + AluSx SINE Alu 1 304 -8 1105 295 127 34 chr20 34450693 34450893 -37702989 + L2 LINE L2 2938 3286 -27 194 325 171 0 chr20 34450919 34451042 -37702840 - MIR SINE MIR -29 233 90 183 311 83 30 chr20 34451498 34451529 -37702353 - L2 LINE L2 -435 2879 2851 2271 116 0 7 chr20 34451529 34451831 -37702051 + AluSq SINE Alu 1 300 -13 183 311 83 30 chr20 34451831 34451931 -37701951 - L2 LINE L2 -463 2851 2741 1915 143 7 0 chr20 34451947 34452258 -37701624 - AluSx SINE Alu 0 313 1 2337 105 7 0 chr20 34452258 34452564 -37701318 - AluSx SINE Alu -4 308 1 1873 133 25 11 chr20 34452593 34452924 -37700958 + AluSx SINE Alu 1 335 0 566 165 0 0 chr20 34453024 34453115 -37700767 - AluJ/FRAM SINE Alu -3 309 219 703 144 10 0 chr20 34453121 34453225 -37700657 - FLAM_C SINE Alu -30 113 9 2056 108 56 0 chr20 34453505 34453793 -37700089 + AluSp SINE Alu 2 305 -8 1829 118 38 38 chr20 34454535 34454824 -37699058 + AluSx SINE Alu 1 289 -23 2010 135 3 23 chr20 34454826 34455129 -37698753 + AluSx SINE Alu 1 297 -15 286 294 0 0 chr20 34455133 34455225 -37698657 - L1M4 LINE L1 -2313 3833 3742 2089 100 0 17 chr20 34455226 34455405 -37698477 - AluSc SINE Alu -1 308 134 2313 100 3 10 chr20 34455405 34455706 -37698176 - AluSq SINE Alu -14 299 1 2089 100 0 17 chr20 34455706 34455817 -37698065 - AluSc SINE Alu -175 134 23 914 173 0 0 chr20 34455835 34455974 -37697908 - AluJo SINE Alu -173 139 1 1764 189 3 17 chr20 34455989 34456285 -37697597 - AluJb SINE Alu -20 292 1 303 219 27 96 chr20 34456285 34456353 -37697529 - L1M4 LINE L1 -2662 3484 3430 2579 61 0 7 chr20 34456353 34456663 -37697219 - AluY SINE Alu -3 308 1 303 219 27 96 chr20 34456663 34456740 -37697142 - L1M4 LINE L1 -2716 3430 3349 747 72 62 0 chr20 34456741 34456838 -37697044 - AluSg SINE Alu -14 298 196 2448 92 3 0 chr20 34456838 34457143 -37696739 - AluSp SINE Alu -6 307 2 1535 107 0 0 chr20 34457144 34457340 -37696542 - AluSg SINE Alu -114 196 1 681 209 47 64 chr20 34457370 34457485 -37696397 + AluJo SINE Alu 2 115 -197 189 0 0 0 chr20 34457485 34457506 -37696376 + (CTA)n Simple_repeat Simple_repeat 1 21 0 681 209 47 64 chr20 34457506 34457562 -37696320 + AluJo SINE Alu 115 170 -142 2451 69 0 20 chr20 34457564 34457889 -37695993 - AluY SINE Alu 0 311 1 2129 118 11 0 chr20 34457897 34458184 -37695698 - AluSx SINE Alu -22 290 1 1411 128 0 5 chr20 34458199 34458403 -37695479 - AluJo SINE Alu -23 289 87 2168 110 31 0 chr20 34458638 34458928 -37694954 - AluSp SINE Alu -14 299 1 2230 134 0 0 chr20 34458952 34459258 -37694624 - AluSx SINE Alu -6 306 1 1554 177 0 71 chr20 34459288 34459610 -37694272 - AluJb SINE Alu -13 299 1 2071 128 3 32 chr20 34459718 34459891 -37693991 - AluSq SINE Alu -9 304 128 216 0 0 0 chr20 34459891 34459915 -37693967 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1915 128 4 0 chr20 34459915 34460196 -37693686 - AluSg SINE Alu -28 282 1 2009 96 6 57 chr20 34460196 34460510 -37693372 - AluSq SINE Alu -15 298 1 2071 128 3 32 chr20 34460510 34460647 -37693235 - AluSq SINE Alu -182 131 1 604 134 210 17 chr20 34460652 34460771 -37693111 - FLAM_C SINE Alu 0 143 2 191 100 0 25 chr20 34461197 34461237 -37692645 + (CGGGG)n Simple_repeat Simple_repeat 5 43 0 252 143 0 0 chr20 34461241 34461283 -37692599 + (CGG)n Simple_repeat Simple_repeat 1 42 0 25 0 0 0 chr20 34461389 34461414 -37692468 + GC_rich Low_complexity Low_complexity 1 25 0 393 263 137 26 chr20 34461864 34462054 -37691828 + MIR SINE MIR 22 232 -30 223 327 47 33 chr20 34462367 34462517 -37691365 - L2 LINE L2 -3 3310 3159 * 256 220 46 64 chr20 34462513 34462622 -37691260 - MIR SINE MIR -49 213 107 2216 116 0 23 chr20 34462860 34463021 -37690861 - AluSx SINE Alu -18 294 131 180 0 0 0 chr20 34463021 34463041 -37690841 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2128 106 7 10 chr20 34463042 34463334 -37690548 - AluSq SINE Alu -22 291 1 2216 116 0 23 chr20 34463334 34463471 -37690411 - AluSx SINE Alu -180 132 1 373 147 15 0 chr20 34463500 34463568 -37690314 + MER41A LTR ERV1 398 466 -88 1831 162 20 0 chr20 34463661 34463963 -37689919 - AluJo SINE Alu -4 308 1 1139 122 50 22 chr20 34464024 34464205 -37689677 - AluSq SINE Alu -127 186 1 2379 112 0 0 chr20 34464215 34464528 -37689354 - AluSq SINE Alu 0 313 1 1247 205 26 33 chr20 34464650 34464953 -37688929 - AluJo SINE Alu -11 301 1 1996 142 10 6 chr20 34465022 34465333 -37688549 - AluSq SINE Alu -1 312 1 336 48 0 0 chr20 34465385 34465427 -37688455 + (TA)n Simple_repeat Simple_repeat 2 43 0 2685 46 0 0 chr20 34465427 34465733 -37688149 - AluY SINE Alu -5 306 1 2247 90 11 0 chr20 34465744 34466050 -37687832 - AluSp SINE Alu 0 309 1 272 250 12 25 chr20 34466097 34466177 -37687705 - Charlie7 DNA MER1_type -2507 105 27 1958 121 45 3 chr20 34466268 34466558 -37687324 + AluSq SINE Alu 1 302 -11 2128 97 10 27 chr20 34466558 34466858 -37687024 + AluSg SINE Alu 1 295 -15 674 241 44 49 chr20 34466898 34467101 -37686781 + MIR SINE MIR 30 231 -31 205 322 40 84 chr20 34467150 34467352 -37686530 - L2 LINE L2 -112 3160 2968 515 233 0 35 chr20 34467926 34468042 -37685840 + LTR33 LTR ERVL 6 117 -404 2464 93 3 0 chr20 34468144 34468454 -37685428 + AluSp SINE Alu 1 311 -2 419 243 28 28 chr20 34468538 34468682 -37685200 + LTR33 LTR ERVL 373 516 -5 2363 97 0 0 chr20 34468700 34469000 -37684882 - AluSc SINE Alu -9 300 1 690 233 0 0 chr20 34469001 34469134 -37684748 - AluJb SINE Alu -178 134 2 954 136 0 7 chr20 34469244 34469384 -37684498 - AluJb SINE Alu -173 139 1 2220 105 0 19 chr20 34469391 34469705 -37684177 - AluSq SINE Alu -5 308 1 968 120 60 0 chr20 34469762 34469912 -37683970 + FRAM SINE Alu 8 166 -10 2319 105 3 3 chr20 34469913 34470218 -37683664 + AluSq SINE Alu 1 305 -8 307 104 0 0 chr20 34470941 34470989 -37682893 + Alu SINE Alu 254 301 0 234 159 114 0 chr20 34470995 34471039 -37682843 - MIR SINE MIR -148 114 66 2082 114 27 0 chr20 34471109 34471407 -37682475 - AluSg1 SINE Alu -3 306 1 2106 123 3 22 chr20 34471769 34472085 -37681797 + AluSx SINE Alu 1 310 -2 2155 107 3 26 chr20 34472973 34473282 -37680600 - AluSx SINE Alu -10 302 1 804 154 24 0 chr20 34473299 34473422 -37680460 - AluJo SINE Alu -176 136 11 784 227 148 11 chr20 34473476 34473740 -37680142 - L1MC4 LINE L1 -886 7156 6857 2406 63 13 0 chr20 34473741 34474044 -37679838 - AluY SINE Alu -4 307 1 704 181 39 0 chr20 34474183 34474310 -37679572 - FLAM_C SINE Alu -10 133 2 1632 224 67 67 chr20 34474371 34474895 -37678987 - L1ME1 LINE L1 -32 6134 5608 2197 107 23 3 chr20 34474895 34475194 -37678688 - AluSx SINE Alu -7 305 1 1632 224 67 67 chr20 34475194 34475293 -37678589 - L1ME1 LINE L1 -557 5609 5511 204 349 71 24 chr20 34475523 34475649 -37678233 - MIR SINE MIR -66 196 65 2314 83 13 7 chr20 34475993 34476293 -37677589 + AluSp SINE Alu 1 302 -11 2071 155 10 0 chr20 34476300 34476609 -37677273 + AluSx SINE Alu 1 312 0 702 177 32 16 chr20 34476618 34476742 -37677140 + FLAM_C SINE Alu 2 127 -16 190 309 0 0 chr20 34477894 34477936 -37675946 - L2 LINE L2 -219 3053 3012 972 220 121 22 chr20 34478111 34478425 -37675457 - L1MC4 LINE L1 -1939 5869 5525 1931 144 14 0 chr20 34478595 34478886 -37674996 - AluSx SINE Alu -17 295 1 2434 71 37 11 chr20 34478920 34479271 -37674611 - L1PA13 LINE L1 0 6163 5804 2174 141 0 0 chr20 34479576 34479880 -37674002 + AluSx SINE Alu 1 304 -8 1929 144 0 4 chr20 34480037 34480314 -37673568 + AluSx SINE Alu 1 276 -36 7272 42 2 0 chr20 34480316 34480690 -37673192 - L1PA6 LINE L1 0 6154 5782 2505 64 3 6 chr20 34480690 34481002 -37672880 - AluY SINE Alu 0 311 1 7272 42 2 0 chr20 34481002 34482018 -37671864 - L1PA6 LINE L1 -372 5782 4763 1977 211 63 75 chr20 34482120 34482232 -37671650 - L1ME3A LINE L1 -5 6165 6053 1260 162 15 129 chr20 34482232 34482387 -37671495 + AluSx SINE Alu 5 102 -210 2116 112 7 3 chr20 34482387 34482681 -37671201 + AluSx SINE Alu 1 295 -17 1260 162 15 129 chr20 34482681 34482865 -37671017 + AluSx SINE Alu 102 305 -7 1977 211 63 75 chr20 34482865 34483242 -37670640 - L1ME3A LINE L1 -117 6053 5684 2382 80 0 7 chr20 34483242 34483543 -37670339 - AluY SINE Alu -12 299 1 1977 211 63 75 chr20 34483543 34483748 -37670134 - L1ME3A LINE L1 -486 5684 5478 2323 92 0 19 chr20 34483837 34484152 -37669730 - AluSg SINE Alu -1 309 1 453 95 0 16 chr20 34484152 34484215 -37669667 + AluSq SINE Alu 131 192 -121 973 27 0 9 chr20 34484315 34484427 -37669455 - AluY SINE Alu -200 111 1 331 286 53 70 chr20 34484530 34484701 -37669181 - L1ME LINE L1 -5901 169 2 2146 72 69 4 chr20 34485251 34485527 -37668355 - AluY SINE Alu -17 294 1 476 344 92 13 chr20 34485830 34486057 -37667825 - MIR SINE MIR 0 262 18 195 269 139 56 chr20 34486298 34486373 -37667509 - L2 LINE L2 -7 3265 3177 2560 48 0 3 chr20 34486373 34486666 -37667216 + AluY SINE Alu 2 293 -18 195 269 139 56 chr20 34486666 34486698 -37667184 - L2 LINE L2 -95 3177 3149 182 291 38 150 chr20 34486758 34486879 -37667003 - L2 LINE L2 -69 3203 3115 2196 118 7 0 chr20 34486879 34487176 -37666706 + AluJb SINE Alu 1 299 -13 182 291 38 150 chr20 34487176 34487267 -37666615 - L2 LINE L2 -157 3115 3015 270 176 0 0 chr20 34487493 34487544 -37666338 + T-rich Low_complexity Low_complexity 1 51 0 2599 65 0 0 chr20 34487661 34487969 -37665913 + AluY SINE Alu 1 308 -3 2099 136 0 7 chr20 34488392 34488706 -37665176 + AluJb SINE Alu 1 312 0 277 293 75 28 chr20 34489076 34489182 -37664700 - MER5A DNA MER1_type -44 145 35 336 24 0 0 chr20 34489190 34489231 -37664651 + (TCTCCC)n Simple_repeat Simple_repeat 1 41 0 7403 62 11 16 chr20 34489231 34490802 -37663080 + SVA Other Other 57 1386 0 2155 107 4 0 chr20 34491601 34491904 -37661978 - AluSg SINE Alu 0 304 1 448 266 114 44 chr20 34491905 34492424 -37661458 - L1M4 LINE L1 -1275 4871 4317 2266 105 3 13 chr20 34492458 34492762 -37661120 - AluSx SINE Alu -11 301 1 5299 200 78 26 chr20 34492817 34492913 -37660969 + L1ME LINE L1 3851 3941 -2225 2214 121 0 13 chr20 34492913 34493219 -37660663 - AluSx SINE Alu -10 302 1 5299 200 78 26 chr20 34493219 34493321 -37660561 + L1ME LINE L1 3941 4036 -2130 861 142 0 8 chr20 34493321 34493455 -37660427 - FLAM_C SINE Alu 0 133 1 5299 200 78 26 chr20 34493455 34493916 -37659966 + L1ME LINE L1 4036 4472 -1694 2445 88 0 0 chr20 34493916 34494212 -37659670 + AluSc SINE Alu 1 296 -13 5299 200 78 26 chr20 34494212 34495158 -37658724 + L1ME LINE L1 4472 5531 -635 2017 217 42 13 chr20 34495158 34495610 -37658272 - LTR40c LTR ERVL 0 465 1 1292 210 89 11 chr20 34495612 34495893 -37657989 - HERVL40 LTR ERVL -2 5528 5226 2040 250 25 14 chr20 34495900 34496412 -37657470 - HERVL40 LTR ERVL -570 4960 4443 2495 82 0 0 chr20 34496412 34496715 -37657167 - AluY SINE Alu -8 303 1 577 93 98 0 chr20 34496716 34496875 -37657007 + L1MB7 LINE L1 5845 6181 -3 3003 241 77 33 chr20 34496877 34497705 -37656177 - HERVL40 LTR ERVL -1570 3960 3096 377 195 0 11 chr20 34497729 34497816 -37656066 + CT-rich Low_complexity Low_complexity 4 89 0 236 156 0 0 chr20 34497837 34497869 -37656013 + Tigger3(Golem) DNA MER2_type 33 64 -2965 1522 93 17 51 chr20 34497869 34498105 -37655777 + AluSg/x SINE Alu 82 309 -3 3273 120 40 24 chr20 34498106 34498428 -37655454 + Tigger3(Golem) DNA MER2_type 338 672 -2357 2336 99 0 0 chr20 34498428 34498730 -37655152 + AluSg SINE Alu 1 302 -8 3273 120 40 24 chr20 34498730 34498906 -37654976 + Tigger3(Golem) DNA MER2_type 672 844 -2185 794 203 25 6 chr20 34498906 34499085 -37654797 + FRAM SINE Alu 1 231 -242 1049 94 6 22 chr20 34499085 34499266 -37654616 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 794 203 25 6 chr20 34499266 34499376 -37654506 + FRAM SINE Alu 231 337 0 332 203 16 0 chr20 34499376 34499440 -37654442 + GA-rich Low_complexity Low_complexity 5 69 0 1033 122 52 103 chr20 34499440 34499522 -37654360 + Tigger3(Golem) DNA MER2_type 831 916 -2113 2381 86 0 17 chr20 34499522 34499824 -37654058 + AluSq SINE Alu 1 297 -16 759 152 8 8 chr20 34499834 34499959 -37653923 + FLAM_C SINE Alu 2 126 -7 1033 122 52 103 chr20 34499959 34500078 -37653804 + Tigger3(Golem) DNA MER2_type 925 1032 -1997 4563 185 80 40 chr20 34500081 34501192 -37652690 - L1 LINE L1 -1110 5036 3882 * 5060 129 32 36 chr20 34501177 34502144 -37651738 - L1M4c LINE L1 -4759 1625 663 989 167 42 0 chr20 34502144 34502312 -37651570 - L1M4c LINE L1 -6206 178 4 1883 78 62 0 chr20 34502500 34502743 -37651139 - AluSq SINE Alu -17 296 39 318 250 62 10 chr20 34502887 34502983 -37650899 - MIR SINE MIR -73 135 35 2136 156 46 85 chr20 34503202 34503682 -37650200 - MER65C LTR ERV1 0 461 1 305 24 24 0 chr20 34505457 34505499 -37648383 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 2203 114 7 0 chr20 34505508 34505797 -37648085 - AluSx SINE Alu -21 291 1 24 32 0 0 chr20 34507010 34507041 -37646841 + AT_rich Low_complexity Low_complexity 1 31 0 2525 35 0 3 chr20 34507048 34507354 -37646528 + AluY SINE Alu 2 306 0 537 281 72 53 chr20 34507767 34508087 -37645795 - L1ME4a LINE L1 -281 5840 5515 1228 114 0 0 chr20 34508318 34508484 -37645398 + AluSg SINE Alu 1 166 -144 2312 102 0 7 chr20 34508622 34508927 -37644955 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr20 34509069 34509092 -37644790 + AT_rich Low_complexity Low_complexity 1 23 0 1755 134 47 0 chr20 34509102 34509377 -37644505 + AluSp SINE Alu 16 303 -10 1162 173 92 26 chr20 34509444 34509715 -37644167 + AluJo SINE Alu 14 302 -10 2259 121 0 0 chr20 34509746 34510044 -37643838 + AluSx SINE Alu 4 301 -11 806 118 9 0 chr20 34510048 34510158 -37643724 + AluSg SINE Alu 1 111 -199 254 143 0 0 chr20 34510158 34510193 -37643689 - Alu SINE Alu -267 35 1 1104 171 9 28 chr20 34510988 34511199 -37642683 - AluSg/x SINE Alu -1 309 103 1570 122 5 5 chr20 34511277 34511499 -37642383 - AluSg SINE Alu -88 222 1 2127 127 3 0 chr20 34511503 34511802 -37642080 - AluY SINE Alu -11 300 1 2093 110 7 36 chr20 34512036 34512344 -37641538 + AluSp SINE Alu 1 299 -14 1412 128 0 0 chr20 34512365 34512569 -37641313 - AluSg/x SINE Alu 0 312 109 492 184 0 0 chr20 34512656 34512732 -37641150 - MER2 DNA MER2_type -3 342 267 2034 152 0 0 chr20 34512743 34513039 -37640843 + AluSx SINE Alu 1 296 -16 678 231 8 0 chr20 34513048 34513182 -37640700 - MER2 DNA MER2_type -209 136 2 367 329 71 35 chr20 34513197 34513367 -37640515 - MER5A DNA MER1_type -13 176 1 2307 71 14 3 chr20 34513420 34513716 -37640166 + AluSp SINE Alu 1 299 -14 2083 141 3 0 chr20 34514044 34514343 -37639539 + AluSx SINE Alu 1 300 -12 320 165 19 19 chr20 34514453 34514556 -37639326 + (CA)n Simple_repeat Simple_repeat 2 104 0 222 37 0 0 chr20 34515376 34515403 -37638479 + (TG)n Simple_repeat Simple_repeat 2 28 0 1676 162 0 50 chr20 34516001 34516304 -37637578 + AluJo SINE Alu 1 288 -24 425 186 266 8 chr20 34516674 34516798 -37637084 + MER5A DNA MER1_type 27 182 -7 906 111 15 0 chr20 34516825 34516960 -37636922 - AluSg/x SINE Alu 0 310 174 203 281 112 0 chr20 34517090 34517179 -37636703 - L2 LINE L2 -101 3212 3114 2290 98 16 0 chr20 34517234 34517539 -37636343 - AluSp SINE Alu -3 310 1 26 0 0 0 chr20 34517687 34517713 -37636169 + AT_rich Low_complexity Low_complexity 1 26 0 2129 124 0 7 chr20 34518393 34518691 -37635191 - AluSx SINE Alu -16 296 1 949 209 8 56 chr20 34518694 34518743 -37635139 - L1MB8 LINE L1 0 6178 6128 2389 84 3 3 chr20 34518743 34519041 -37634841 - AluSp SINE Alu -15 298 1 949 209 8 56 chr20 34519041 34519208 -37634674 - L1MB8 LINE L1 -50 6128 5973 1719 203 0 7 chr20 34519208 34519509 -37634373 - AluJo SINE Alu -13 299 1 949 209 8 56 chr20 34519509 34519540 -37634342 - L1MB8 LINE L1 -205 5973 5942 534 187 154 8 chr20 34519540 34519663 -37634219 - MER82 DNA MER2_type -261 392 252 494 33 0 0 chr20 34519681 34519741 -37634141 - AluJ/FLAM SINE Alu -251 61 2 366 123 18 0 chr20 34519769 34519826 -37634056 + L1PB3 LINE L1 6090 6147 -7 669 212 20 20 chr20 34519840 34519991 -37633891 - MER82 DNA MER2_type -458 195 45 761 145 15 0 chr20 34520008 34520139 -37633743 - L1MB8 LINE L1 -399 5785 5653 1757 160 0 50 chr20 34520755 34520924 -37632958 - AluSx SINE Alu -10 302 126 2160 141 0 0 chr20 34520924 34521228 -37632654 - AluSx SINE Alu -8 304 1 1757 160 0 50 chr20 34521228 34521243 -37632639 - AluSx SINE Alu -186 126 112 195 42 0 0 chr20 34521243 34521267 -37632615 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1757 160 0 50 chr20 34521267 34521399 -37632483 - AluSx SINE Alu -200 112 1 924 219 0 48 chr20 34521495 34521705 -37632177 - AluJo SINE Alu -92 220 21 222 37 0 0 chr20 34522247 34522274 -37631608 + (TG)n Simple_repeat Simple_repeat 1 27 0 844 134 8 0 chr20 34522275 34522394 -37631488 - FLAM_C SINE Alu -23 120 1 2429 58 0 0 chr20 34522566 34522878 -37631004 - AluY SINE Alu 0 314 3 823 149 182 39 chr20 34523038 34523219 -37630663 + AluJo SINE Alu 1 207 -105 351 0 0 0 chr20 34523299 34523338 -37630544 + (TA)n Simple_repeat Simple_repeat 2 40 0 1990 135 0 13 chr20 34523338 34523642 -37630240 - AluSq SINE Alu -13 300 1 779 178 0 15 chr20 34523645 34523780 -37630102 - AluJo/FLAM SINE Alu -169 133 1 2023 123 18 0 chr20 34523979 34524263 -37629619 - AluSx SINE Alu -18 294 6 2041 113 3 11 chr20 34524355 34524665 -37629217 + AluSx SINE Alu 2 309 0 270 226 0 88 chr20 34525503 34525605 -37628277 - L1MC5 LINE L1 -30 7931 7839 1729 193 47 94 chr20 34526684 34527217 -37626665 - L1ME1 LINE L1 -10 6156 5649 1963 107 0 57 chr20 34527249 34527572 -37626310 + AluSx SINE Alu 3 308 0 613 140 61 44 chr20 34527573 34527687 -37626195 - AluJb SINE Alu -194 118 3 670 233 87 10 chr20 34527691 34527878 -37626004 - L1ME1 LINE L1 -510 5656 5485 2061 121 31 0 chr20 34527878 34528168 -37625714 - AluSx SINE Alu -13 299 1 670 233 87 10 chr20 34528168 34528278 -37625604 - L1ME1 LINE L1 -681 5485 5165 189 0 0 0 chr20 34528307 34528328 -37625554 + (T)n Simple_repeat Simple_repeat 1 21 0 2103 146 6 3 chr20 34528328 34528650 -37625232 - Tigger1 DNA MER2_type -2092 326 4 569 228 134 33 chr20 34528789 34529039 -37624843 + MER102b DNA MER1_type 29 330 -11 213 108 0 0 chr20 34529153 34529190 -37624692 + (T)n Simple_repeat Simple_repeat 1 37 0 26 0 0 0 chr20 34529194 34529220 -37624662 + AT_rich Low_complexity Low_complexity 1 26 0 9068 26 3 260 chr20 34529226 34531089 -37622793 - SVA Other Other -2 1384 1 2592 210 108 36 chr20 34531089 34531916 -37621966 - L1ME1 LINE L1 -1018 5128 4228 2082 134 20 0 chr20 34531916 34532221 -37621661 - AluSx SINE Alu -1 311 1 2592 210 108 36 chr20 34532221 34532278 -37621604 - L1ME1 LINE L1 -1918 4228 4177 318 311 81 11 chr20 34532640 34532851 -37621031 + MIR SINE MIR 10 234 -28 1353 164 97 53 chr20 34533227 34533526 -37620356 - AluJo SINE Alu 0 312 1 1218 136 179 8 chr20 34533804 34534055 -37619827 - MER7A DNA MER2_type -1 345 54 219 169 85 17 chr20 34534447 34534506 -37619376 + MER91C DNA MER1_type 43 105 -35 1037 163 0 12 chr20 34535426 34535598 -37618284 - FRAM SINE Alu -6 170 1 440 259 76 8 chr20 34535602 34535733 -37618149 - MER5A DNA MER1_type -6 183 44 30 0 0 0 chr20 34535988 34536018 -37617864 + AT_rich Low_complexity Low_complexity 1 30 0 1476 194 26 4 chr20 34536248 34536521 -37617361 - AluJb SINE Alu -33 279 1 2196 111 7 0 chr20 34536566 34536864 -37617018 - AluSg SINE Alu -9 301 2 181 317 146 0 chr20 34537080 34537203 -37616679 - L2 LINE L2 -203 3069 2929 * 198 200 0 22 chr20 34537200 34537245 -37616637 - MIR SINE MIR -64 144 101 26 0 0 0 chr20 34537369 34537395 -37616487 + AT_rich Low_complexity Low_complexity 1 26 0 307 200 0 0 chr20 34537395 34537455 -37616427 - Alu SINE Alu 0 300 241 1198 245 74 44 chr20 34537455 34537890 -37615992 + L2 LINE L2 2512 2955 -317 480 210 35 125 chr20 34537981 34538093 -37615789 + L2 LINE L2 3132 3220 -93 2292 108 3 0 chr20 34538093 34538400 -37615482 - AluSg SINE Alu -2 308 1 480 210 35 125 chr20 34538400 34538487 -37615395 + L2 LINE L2 3220 3313 0 783 32 0 0 chr20 34538487 34538581 -37615301 + (AATAG)n Simple_repeat Simple_repeat 3 96 0 210 234 21 43 chr20 34538582 34538629 -37615253 - L2 LINE L2 -80 3192 3147 1669 122 41 24 chr20 34538997 34539291 -37614591 - AluSq SINE Alu -2 311 13 1265 133 5 182 chr20 34539982 34540350 -37613532 - AluJb SINE Alu -9 303 1 2234 117 3 0 chr20 34540475 34540775 -37613107 + AluSx SINE Alu 2 302 -10 718 178 75 34 chr20 34540820 34540966 -37612916 + FRAM SINE Alu 20 171 -5 1563 147 94 8 chr20 34540977 34541243 -37612639 + AluJo SINE Alu 1 289 -23 387 0 0 0 chr20 34541243 34541286 -37612596 + (TG)n Simple_repeat Simple_repeat 2 44 0 706 143 45 45 chr20 34541498 34541631 -37612251 - FLAM_C SINE Alu 0 133 1 2298 100 10 0 chr20 34541790 34542099 -37611783 - AluSx SINE Alu 0 312 1 1307 178 50 60 chr20 34542233 34542514 -37611368 + AluJo SINE Alu 1 278 -34 360 64 0 0 chr20 34542514 34542561 -37611321 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 241 339 9 17 chr20 34542760 34542875 -37611007 + L1M4b LINE L1 11 124 -6735 * 1883 161 119 22 chr20 34542857 34543309 -37610573 + L1MB8 LINE L1 5682 6177 -1 180 0 0 0 chr20 34543417 34543437 -37610445 + (T)n Simple_repeat Simple_repeat 1 20 0 252 0 0 0 chr20 34544164 34544192 -37609690 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1959 113 3 7 chr20 34544195 34544478 -37609404 - AluSx SINE Alu -30 282 1 2442 90 3 0 chr20 34544761 34545071 -37608811 - AluSp SINE Alu -2 311 1 1989 126 0 4 chr20 34545110 34545387 -37608495 - AluSx SINE Alu -36 276 1 186 300 0 33 chr20 34545890 34545950 -37607932 - MIR3 SINE MIR -22 186 129 379 280 136 74 chr20 34546289 34546707 -37607175 + L2 LINE L2 2816 3259 -54 2080 120 0 23 chr20 34546788 34547087 -37606795 - AluSx SINE Alu -20 292 1 748 199 51 26 chr20 34547096 34547252 -37606630 - MER58A DNA MER1_type -16 208 49 26 0 0 0 chr20 34547448 34547474 -37606408 + AT_rich Low_complexity Low_complexity 1 26 0 2095 117 20 0 chr20 34547804 34548104 -37605778 - AluSx SINE Alu -6 306 1 273 119 0 0 chr20 34548106 34548148 -37605734 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 544 96 0 0 chr20 34548151 34548234 -37605648 - AluSp/q SINE Alu -2 311 229 310 136 9 0 chr20 34548234 34548293 -37605589 - Alu SINE Alu -254 45 2 1109 176 137 31 chr20 34548499 34548825 -37605057 - MER93b LTR ERV1 0 403 14 2130 198 85 170 chr20 34549060 34549410 -37604472 - L1MC4 LINE L1 -89 7953 7575 1629 213 0 3 chr20 34549410 34549715 -37604167 - AluJb SINE Alu -1 311 8 2130 198 85 170 chr20 34549715 34550151 -37603731 - L1MC4 LINE L1 -467 7575 7104 766 215 0 15 chr20 34550151 34550286 -37603596 - AluJo SINE Alu -175 137 5 2130 198 85 170 chr20 34550286 34550560 -37603322 - L1MC4 LINE L1 -938 7104 6789 2433 88 0 0 chr20 34550560 34550868 -37603014 - AluSg SINE Alu -2 308 1 2130 198 85 170 chr20 34550868 34551035 -37602847 - L1MC4 LINE L1 -1253 6789 6609 1890 155 3 3 chr20 34551072 34551362 -37602520 - AluJo SINE Alu -22 290 1 2109 123 23 3 chr20 34551378 34551680 -37602202 - AluSg SINE Alu 0 310 3 1836 159 7 3 chr20 34551692 34551988 -37601894 - AluSx SINE Alu -15 297 1 1118 199 107 100 chr20 34551994 34552392 -37601490 - L1MC5 LINE L1 -447 7514 7109 571 223 25 0 chr20 34552392 34552513 -37601369 - L1PA16 LINE L1 -7 6159 6036 1118 199 107 100 chr20 34552513 34552713 -37601169 - L1MC5 LINE L1 -852 7109 6912 2063 141 13 0 chr20 34552724 34553029 -37600853 - AluSx SINE Alu -3 309 1 1996 125 0 4 chr20 34553041 34553341 -37600541 - AluSc SINE Alu 0 299 1 769 216 61 86 chr20 34553341 34553586 -37600296 - L1MC5 LINE L1 -1040 6921 6683 822 232 58 11 chr20 34553609 34553853 -37600029 - MLT1F LTR MaLR -50 517 175 263 283 136 54 chr20 34553895 34554079 -37599803 + MIR SINE MIR 45 243 -19 2370 100 0 0 chr20 34554422 34554731 -37599151 - AluSc SINE Alu 0 309 1 674 175 0 0 chr20 34554731 34554834 -37599048 - FLAM_C SINE Alu -5 138 36 647 175 0 0 chr20 34554833 34554930 -37598952 - AluJ/FLAM SINE Alu -215 97 1 * 601 177 40 24 chr20 34554950 34555074 -37598808 - L1MD2 LINE L1 -13 6346 6221 215 228 0 29 chr20 34555879 34555941 -37597941 + GA-rich Low_complexity Low_complexity 1 60 0 800 160 8 17 chr20 34556944 34557063 -37596819 - FLAM_C SINE Alu -15 118 1 2229 89 23 0 chr20 34557807 34558110 -37595772 - AluSg SINE Alu 0 310 1 1636 198 0 10 chr20 34558121 34558429 -37595453 - AluJb SINE Alu -1 311 7 2342 67 0 0 chr20 34558468 34558774 -37595108 - AluY SINE Alu 0 306 1 252 242 13 134 chr20 34559593 34559750 -37594132 - MIR3 SINE MIR -17 191 54 2242 112 0 3 chr20 34559878 34560174 -37593708 + AluSx SINE Alu 1 295 -17 230 241 89 0 chr20 34560202 34560281 -37593601 - L2 LINE L2 -197 3075 2990 1872 101 110 44 chr20 34560952 34561133 -37592749 + MER44D DNA MER2_type 1 169 -2322 2440 78 0 10 chr20 34561133 34561439 -37592443 - AluSq SINE Alu -10 303 1 1872 101 110 44 chr20 34561439 34561575 -37592307 + MER44D DNA MER2_type 169 609 0 356 184 72 43 chr20 34561637 34561737 -37592145 + MIR SINE MIR 63 171 -37 27 0 0 0 chr20 34563290 34563317 -37590565 + AT_rich Low_complexity Low_complexity 1 27 0 533 235 0 0 chr20 34563468 34563566 -37590316 + FLAM_A SINE Alu 1 98 -44 1992 110 7 10 chr20 34563566 34563858 -37590024 + AluSx SINE Alu 13 303 -9 268 244 133 44 chr20 34565272 34565407 -37588475 - L1MEc LINE L1 -4682 1714 1568 1783 119 0 15 chr20 34565432 34565701 -37588181 - AluSx SINE Alu 0 312 48 677 240 76 33 chr20 34565723 34565998 -37587884 + L1MC4 LINE L1 7720 8006 -36 818 326 116 23 chr20 34566081 34566603 -37587279 - L2 LINE L2 -266 3047 2467 595 225 57 105 chr20 34566636 34566970 -37586912 - L2 LINE L2 0 3313 2996 2313 120 0 0 chr20 34567027 34567335 -37586547 - AluSg SINE Alu -2 308 1 1568 176 3 31 chr20 34567350 34567639 -37586243 - AluJb SINE Alu -26 286 6 2362 80 10 0 chr20 34567899 34568200 -37585682 + AluSp SINE Alu 1 304 -9 2459 61 0 32 chr20 34569329 34569642 -37584240 - AluY SINE Alu -8 303 1 241 274 44 22 chr20 34571281 34571376 -37582506 + MIR SINE MIR 63 163 -45 21 0 0 0 chr20 34572584 34572605 -37581277 + AT_rich Low_complexity Low_complexity 1 21 0 335 113 0 16 chr20 34572666 34572728 -37581154 - Alu SINE Alu 0 302 242 228 237 0 0 chr20 34572719 34572757 -37581125 - AluJ/monomer SINE Alu -261 38 1 * 823 153 0 67 chr20 34572772 34572922 -37580960 - FLAM_C SINE Alu -2 141 2 831 248 93 22 chr20 34572922 34573244 -37580638 - L1M4 LINE L1 -945 5201 4857 2257 97 3 10 chr20 34573373 34573672 -37580210 - AluSp SINE Alu -16 297 1 311 372 0 0 chr20 34573906 34574000 -37579882 - L2 LINE L2 -33 3239 3146 1530 198 3 11 chr20 34574125 34574408 -37579474 + AluJb SINE Alu 1 281 -31 26 0 0 0 chr20 34574408 34574434 -37579448 + AT_rich Low_complexity Low_complexity 1 26 0 222 91 0 0 chr20 34574552 34574585 -37579297 + (TCCCC)n Simple_repeat Simple_repeat 1 33 0 2027 146 17 0 chr20 34574611 34574912 -37578970 - AluSg SINE Alu -4 306 1 231 61 0 0 chr20 34575036 34575069 -37578813 + (TG)n Simple_repeat Simple_repeat 2 34 0 242 362 69 9 chr20 34575646 34575762 -37578120 + L2 LINE L2 3146 3268 -4 2241 87 18 0 chr20 34575766 34576052 -37577830 + AluSq SINE Alu 1 291 -22 883 124 0 0 chr20 34576094 34576215 -37577667 + AluSq/x SINE Alu 1 121 -191 2157 124 7 0 chr20 34576216 34576514 -37577368 + AluSx SINE Alu 2 301 -11 31 26 0 0 chr20 34577082 34577120 -37576762 + AT_rich Low_complexity Low_complexity 1 38 0 1950 135 7 3 chr20 34577466 34577803 -37576079 - AluSq SINE Alu 0 338 1 2254 74 40 14 chr20 34577815 34578112 -37575770 - AluY SINE Alu -6 305 1 239 288 0 0 chr20 34579136 34579195 -37574687 - L1ME LINE L1 -462 5659 5601 1642 110 163 4 chr20 34579725 34579989 -37573893 - AluSg1 SINE Alu -3 306 1 251 254 67 75 chr20 34580075 34580209 -37573673 + L3 LINE CR1 1436 1568 -9 1681 173 0 7 chr20 34580481 34580797 -37573085 - AluJb SINE Alu 0 316 3 297 68 0 0 chr20 34580798 34580842 -37573040 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 2110 93 0 4 chr20 34580842 34581121 -37572761 - AluSc SINE Alu -31 278 1 1115 83 0 0 chr20 34581121 34581254 -37572628 - AluSc SINE Alu -176 133 1 507 247 24 16 chr20 34581617 34581776 -37572106 - L1MA10 LINE L1 0 6334 6150 259 225 22 11 chr20 34581915 34582004 -37571878 + (TA)n Simple_repeat Simple_repeat 2 91 0 2096 134 16 0 chr20 34582220 34582526 -37571356 + AluSx SINE Alu 1 311 -1 583 141 131 91 chr20 34583314 34583513 -37570369 - Charlie5 DNA MER1_type 0 2624 2418 1451 167 68 44 chr20 34583526 34583820 -37570062 + AluJb SINE Alu 1 301 -11 2177 108 0 14 chr20 34584448 34584745 -37569137 + AluSq SINE Alu 1 293 -20 1741 158 55 0 chr20 34584757 34585049 -37568833 + AluSx SINE Alu 1 308 -4 2145 120 0 0 chr20 34585636 34585927 -37567955 + AluSq SINE Alu 1 291 -22 232 171 24 0 chr20 34585930 34586012 -37567870 + (TA)n Simple_repeat Simple_repeat 1 84 0 651 202 54 23 chr20 34586134 34586263 -37567619 + FLAM_A SINE Alu 1 133 0 2090 129 7 3 chr20 34586604 34586906 -37566976 + AluSx SINE Alu 1 303 -9 812 179 115 111 chr20 34586926 34586947 -37566935 - Charlie1b DNA MER1_type -2508 253 234 2169 116 10 0 chr20 34586947 34587248 -37566634 - AluSx SINE Alu -8 304 1 812 179 115 111 chr20 34587248 34587478 -37566404 - Charlie1b DNA MER1_type -2527 234 1 675 293 98 11 chr20 34587481 34587768 -37566114 - L2 LINE L2 -499 2815 2504 2260 103 0 3 chr20 34587773 34588075 -37565807 - AluSc SINE Alu -8 301 1 227 254 0 34 chr20 34588139 34588198 -37565684 + MIR SINE MIR 33 89 -119 2242 97 0 3 chr20 34588775 34589065 -37564817 - AluSc SINE Alu -20 289 1 1708 167 43 10 chr20 34589095 34589395 -37564487 - AluSx SINE Alu -2 310 1 241 252 87 68 chr20 34589445 34589548 -37564334 - MIR SINE MIR -117 145 41 622 298 133 38 chr20 34590075 34590474 -37563408 + L2 LINE L2 2036 2472 -842 1629 170 26 26 chr20 34590475 34590787 -37563095 - AluJo SINE Alu 0 312 1 21 0 0 0 chr20 34590804 34590825 -37563057 + AT_rich Low_complexity Low_complexity 1 21 0 1695 136 33 15 chr20 34590970 34591243 -37562639 + MER1B DNA MER1_type 1 278 -61 671 208 64 69 chr20 34591246 34591391 -37562491 - AluJo SINE Alu -59 253 108 8813 54 8 2 chr20 34591391 34592455 -37561427 - MER11C LTR ERVK 0 1071 1 671 208 64 69 chr20 34592455 34592482 -37561400 - AluJo SINE Alu -204 108 82 482 260 81 16 chr20 34592505 34592534 -37561348 + MER58A DNA MER1_type 1 27 -314 2064 125 7 3 chr20 34592534 34592830 -37561052 + AluSx SINE Alu 1 297 -15 482 260 81 16 chr20 34592830 34592923 -37560959 + MER58A DNA MER1_type 27 131 -93 269 189 75 0 chr20 34592924 34592977 -37560905 + MER58A DNA MER1_type 168 224 0 2183 105 0 30 chr20 34593144 34593449 -37560433 - AluSx SINE Alu -16 296 1 2212 112 23 0 chr20 34593738 34594043 -37559839 - AluSq SINE Alu -1 312 1 282 314 0 0 chr20 34594428 34594530 -37559352 + L1ME LINE L1 5723 5824 -297 295 214 0 0 chr20 34594625 34594681 -37559201 - MLT1G LTR MaLR -6 584 529 371 174 27 48 chr20 34594706 34594813 -37559069 - AluS SINE Alu -236 63 1 2244 116 0 0 chr20 34594819 34595120 -37558762 - AluSx SINE Alu -11 301 1 1532 166 30 50 chr20 34595365 34595666 -37558216 - AluJo SINE Alu -17 295 1 548 202 0 0 chr20 34596113 34596202 -37557680 - Tigger7 DNA MER2_type 0 2587 2499 2776 147 118 10 chr20 34596226 34596716 -37557166 - Tigger7 DNA MER2_type -1944 543 1 246 246 16 0 chr20 34597021 34597082 -37556800 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 225 286 0 24 chr20 34597726 34597811 -37556071 - MIR SINE MIR -105 103 31 292 318 87 7 chr20 34597821 34598044 -37555838 - MIR3 SINE MIR -14 248 8 2338 99 7 0 chr20 34599381 34599674 -37554208 - AluSx SINE Alu -17 295 1 1541 219 20 82 chr20 34599918 34600407 -37553475 - MLT1C LTR MaLR -4 463 5 947 242 73 51 chr20 34601018 34601044 -37552838 + L1M4 LINE L1 5341 5365 -809 1539 175 63 45 chr20 34601044 34601426 -37552456 - MLT1B LTR MaLR 0 390 2 947 242 73 51 chr20 34601426 34601749 -37552133 + L1M4 LINE L1 5365 5698 -476 2224 112 0 3 chr20 34602774 34603068 -37550814 + AluSx SINE Alu 1 293 -19 1730 138 6 83 chr20 34603557 34603883 -37549999 + AluJb SINE Alu 2 302 -10 1446 220 17 0 chr20 34605063 34605354 -37548528 - AluJo SINE Alu 0 312 17 368 296 0 11 chr20 34605954 34606042 -37547840 + Charlie1 DNA MER1_type 3 89 -2672 * 520 161 157 124 chr20 34606039 34606306 -37547576 + Charlie1 DNA MER1_type 2410 2685 -76 1316 176 97 29 chr20 34606368 34606647 -37547235 + AluJo SINE Alu 1 298 -14 362 229 107 15 chr20 34606715 34606846 -37547036 - L1ME3A LINE L1 -306 5864 5722 1350 267 69 24 chr20 34606852 34607271 -37546611 - MER68 LTR ERV1 -7 555 118 673 51 0 4 chr20 34607508 34607686 -37546196 + AluY SINE Alu 51 297 -14 488 143 41 10 chr20 34607781 34607879 -37546003 - L1MB3 LINE L1 0 6183 6083 2474 149 31 2 chr20 34607973 34608390 -37545492 - L1MB3 LINE L1 -30 6153 5725 666 133 0 10 chr20 34608432 34608530 -37545352 - MER68 LTR ERV1 -465 97 1 715 164 0 9 chr20 34608616 34608732 -37545150 + FLAM_A SINE Alu 11 125 -17 727 205 42 70 chr20 34609094 34609201 -37544681 + L1MDa LINE L1 21 121 -6419 301 193 211 61 chr20 34609201 34609315 -37544567 + FLAM_A SINE Alu 2 132 -1 727 205 42 70 chr20 34609315 34609422 -37544460 + L1MDa LINE L1 121 229 -6311 924 174 7 0 chr20 34609483 34609627 -37544255 + FRAM SINE Alu 1 142 -34 512 0 32 0 chr20 34609627 34609690 -37544192 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 228 167 0 0 chr20 34609710 34609758 -37544124 + (TA)n Simple_repeat Simple_repeat 2 49 0 548 199 152 18 chr20 34609758 34609929 -37543953 + L1MDa LINE L1 2085 2278 -4262 297 175 48 16 chr20 34609926 34609989 -37543893 + L1MD2 LINE L1 6069 6133 -226 * 266 184 161 58 chr20 34609991 34610036 -37543846 + L1MD3 LINE L1 7829 7868 -127 1742 158 0 0 chr20 34610036 34610296 -37543586 + AluSx SINE Alu 37 296 -16 266 184 161 58 chr20 34610296 34610337 -37543545 + L1MD3 LINE L1 7868 7924 -71 1229 174 39 53 chr20 34610521 34610802 -37543080 + AluJo SINE Alu 19 295 -17 288 0 0 0 chr20 34612197 34612229 -37541653 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1314 169 3 113 chr20 34612648 34613006 -37540876 + AluSx SINE Alu 1 312 0 1631 146 45 32 chr20 34613781 34614089 -37539793 + AluSx SINE Alu 1 312 0 1938 135 43 0 chr20 34614113 34614394 -37539488 + AluSx SINE Alu 1 293 -19 1106 215 63 36 chr20 34614427 34614729 -37539153 - L1MC4 LINE L1 -249 7793 7484 542 149 91 84 chr20 34614737 34614843 -37539039 + MER58 DNA MER1_type 2238 2347 -73 2157 99 6 29 chr20 34614843 34615155 -37538727 - AluSg SINE Alu -4 306 2 542 149 91 84 chr20 34615155 34615202 -37538680 + MER58 DNA MER1_type 2347 2392 -28 1707 161 39 7 chr20 34616959 34617115 -37536767 - AluJb SINE Alu -23 289 119 369 0 0 0 chr20 34617115 34617156 -37536726 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1707 161 39 7 chr20 34617156 34617279 -37536603 - AluJb SINE Alu -193 119 1 202 274 0 32 chr20 34617336 34617398 -37536484 + MER5B DNA MER1_type 86 145 -33 288 111 0 0 chr20 34617510 34617555 -37536327 + (A)n Simple_repeat Simple_repeat 1 45 0 195 42 0 0 chr20 34617792 34617816 -37536066 + (A)n Simple_repeat Simple_repeat 1 24 0 233 274 0 0 chr20 34618218 34618269 -37535613 + L2 LINE L2 3208 3258 -14 1509 179 57 4 chr20 34618773 34619052 -37534830 + AluJb SINE Alu 1 294 -18 647 197 143 0 chr20 34619061 34619208 -37534674 + L1MC4 LINE L1 7874 8041 -1 1207 171 104 46 chr20 34619221 34619376 -37534506 + AluJb SINE Alu 1 146 -156 2388 97 0 0 chr20 34619376 34619686 -37534196 + AluY SINE Alu 1 310 -1 1207 171 104 46 chr20 34619686 34619810 -37534072 + AluJb SINE Alu 146 296 -6 337 270 0 43 chr20 34619852 34619967 -37533915 + MIR3 SINE MIR 15 124 -84 313 299 239 0 chr20 34620387 34620554 -37533328 - MIR SINE MIR -6 256 50 2091 112 4 0 chr20 34620671 34620949 -37532933 + AluY SINE Alu 1 279 -32 582 198 54 0 chr20 34621080 34621191 -37532691 - FLAM_A SINE Alu -16 117 1 634 274 134 5 chr20 34621238 34621461 -37532421 - MER20B DNA MER1_type -235 548 297 354 299 51 19 chr20 34621481 34621638 -37532244 - L1ME LINE L1 -566 5600 5439 305 319 0 0 chr20 34621642 34621755 -37532127 - L1ME LINE L1 -797 5349 5237 2088 138 0 3 chr20 34622033 34622324 -37531558 - AluSx SINE Alu -22 290 1 667 142 0 62 chr20 34622540 34622653 -37531229 + FLAM_A SINE Alu 1 106 -36 762 168 0 15 chr20 34623672 34623803 -37530079 - FLAM_C SINE Alu -4 129 1 2466 74 0 0 chr20 34624588 34624887 -37528995 + AluY SINE Alu 1 299 -12 453 254 23 15 chr20 34625210 34625340 -37528542 - MER94 DNA DNA -3 131 1 1906 127 25 7 chr20 34625586 34625899 -37527983 - AluSg SINE Alu 0 318 1 1828 116 84 4 chr20 34626027 34626302 -37527580 - AluSg SINE Alu -13 297 1 1932 135 36 0 chr20 34626333 34626614 -37527268 - AluSx SINE Alu -21 291 1 1788 161 3 3 chr20 34626644 34626960 -37526922 + AluSx SINE Alu 1 316 0 27 62 0 0 chr20 34627430 34627478 -37526404 + AT_rich Low_complexity Low_complexity 1 48 0 2125 125 0 0 chr20 34627513 34627822 -37526060 - AluSg SINE Alu 0 309 1 1896 159 7 0 chr20 34627953 34628255 -37525627 + AluJb SINE Alu 9 312 0 395 263 156 45 chr20 34628308 34628532 -37525350 + HAL1 LINE L1 748 996 -1511 1011 243 144 28 chr20 34628558 34629087 -37524795 + HAL1 LINE L1 1221 1930 -577 1379 183 13 59 chr20 34629141 34629447 -37524435 + AluJo SINE Alu 1 292 -20 1739 70 0 22 chr20 34629607 34629835 -37524047 + AluSg/x SINE Alu 79 301 -9 2402 89 3 0 chr20 34631220 34631522 -37522360 - AluSp SINE Alu -10 303 1 2249 110 0 28 chr20 34631522 34631839 -37522043 - AluSx SINE Alu -4 308 1 235 293 37 12 chr20 34631897 34631979 -37521903 + MIR SINE MIR 15 98 -164 230 317 59 0 chr20 34632479 34632580 -37521302 + L2 LINE L2 2233 2339 -975 2528 70 0 0 chr20 34632848 34633147 -37520735 + AluY SINE Alu 1 299 -12 1707 163 7 29 chr20 34633155 34633462 -37520420 + AluJb SINE Alu 1 300 -12 217 275 239 14 chr20 34634397 34634535 -37519347 - MIR SINE MIR -1 261 93 1984 49 0 0 chr20 34634595 34634821 -37519061 - AluY SINE Alu -19 292 67 1725 140 4 4 chr20 34635167 34635417 -37518465 - AluSx SINE Alu -40 272 23 757 146 0 36 chr20 34635656 34635672 -37518210 - FLAM_C SINE Alu -169 133 118 432 0 0 0 chr20 34635672 34635720 -37518162 + (TG)n Simple_repeat Simple_repeat 1 48 0 757 146 0 36 chr20 34635720 34635840 -37518042 - FLAM_C SINE Alu -184 118 2 1634 171 23 29 chr20 34635875 34636184 -37517698 + AluJb SINE Alu 1 307 -5 294 239 28 0 chr20 34636366 34636437 -37517445 + MIR SINE MIR 3 75 -187 228 314 19 19 chr20 34636695 34636800 -37517082 + MIR3 SINE MIR 9 113 -95 1357 176 114 29 chr20 34636852 34637125 -37516757 + AluJo SINE Alu 4 299 -13 755 174 0 74 chr20 34637209 34637309 -37516573 + AluSx SINE Alu 20 126 -186 590 0 0 14 chr20 34637309 34637380 -37516502 + (TA)n Simple_repeat Simple_repeat 1 70 0 315 0 0 0 chr20 34637381 34637416 -37516466 + (TG)n Simple_repeat Simple_repeat 2 36 0 755 174 0 74 chr20 34637416 34637462 -37516420 + AluSx SINE Alu 125 157 -155 184 325 78 0 chr20 34637697 34637774 -37516108 - MIR SINE MIR -63 145 63 2308 94 13 16 chr20 34639547 34639855 -37514027 - AluSx SINE Alu -5 307 1 2126 119 0 22 chr20 34640129 34640448 -37513434 + AluSx SINE Alu 1 312 0 2120 118 3 3 chr20 34640826 34641139 -37512743 - AluSp SINE Alu 0 313 1 244 346 12 0 chr20 34641191 34641272 -37512610 + L3 LINE CR1 757 838 -739 368 270 0 0 chr20 34641272 34641372 -37512510 - L1MDb LINE L1 -5539 870 771 209 325 88 18 chr20 34642800 34642914 -37510968 + L3 LINE CR1 1453 1574 -3 1764 152 13 23 chr20 34643921 34644223 -37509659 - AluJb SINE Alu -13 299 1 543 328 133 30 chr20 34644308 34644705 -37509177 - L1ME4a LINE L1 -152 5969 5532 806 126 89 7 chr20 34645467 34645602 -37508280 + AluJo SINE Alu 1 146 -166 492 288 126 58 chr20 34645686 34645814 -37508068 + L1MEd LINE L1 675 793 -5326 2250 92 13 0 chr20 34645814 34646120 -37507762 + AluSg SINE Alu 1 310 0 492 288 126 58 chr20 34646120 34646300 -37507582 + L1MEd LINE L1 793 1004 -5115 2144 114 0 25 chr20 34646332 34646649 -37507233 + AluY SINE Alu 1 309 -2 447 276 55 28 chr20 34647382 34647527 -37506355 + MIR SINE MIR 81 229 -33 308 319 107 32 chr20 34648154 34648370 -37505512 - L2 LINE L2 -511 2803 2572 2005 127 10 10 chr20 34648949 34649256 -37504626 + AluSx SINE Alu 1 307 -5 503 81 122 14 chr20 34649391 34649465 -37504417 + AluJb SINE Alu 85 166 -146 * 703 115 0 0 chr20 34649464 34649560 -37504322 - AluSg/x SINE Alu -78 234 139 287 186 35 47 chr20 34651056 34651142 -37502740 - MIR SINE MIR -84 124 40 455 337 99 5 chr20 34651792 34651994 -37501888 - MIR SINE MIR -13 249 29 914 182 12 24 chr20 34652474 34652644 -37501238 - AluJb SINE Alu -8 304 137 192 77 0 0 chr20 34654378 34654404 -37499478 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 300 344 57 0 chr20 34654626 34654748 -37499134 + MIR SINE MIR 117 245 -17 541 279 107 0 chr20 34655163 34655200 -37498682 - MIR SINE MIR -21 241 209 2031 147 0 0 chr20 34655200 34655506 -37498376 - AluSx SINE Alu -6 306 1 541 279 107 0 chr20 34655506 34655656 -37498226 - MIR SINE MIR -53 209 35 201 265 326 0 chr20 34655669 34655767 -37498115 - MIR SINE MIR -48 214 85 1378 171 28 35 chr20 34656223 34656509 -37497373 + AluJb SINE Alu 11 294 -18 2137 93 14 0 chr20 34658749 34659039 -37494843 + AluY SINE Alu 1 294 -17 242 320 87 10 chr20 34659250 34659353 -37494529 - MIR SINE MIR -92 170 60 2098 122 13 3 chr20 34659357 34659661 -37494221 + AluSx SINE Alu 2 308 -4 200 212 76 30 chr20 34662213 34662279 -37491603 + MIR SINE MIR 77 145 -117 401 231 104 113 chr20 34662624 34662845 -37491037 - MIR SINE MIR -16 246 28 322 289 237 6 chr20 34664763 34664936 -37488946 + L3 LINE CR1 1337 1549 -28 404 359 62 10 chr20 34665515 34665707 -37488175 + MIR SINE MIR 25 226 -36 195 353 229 0 chr20 34667020 34667142 -37486740 + MIR3 SINE MIR 33 182 -26 229 192 0 0 chr20 34667815 34667867 -37486015 + (CTGGGG)n Simple_repeat Simple_repeat 6 57 0 33 66 0 0 chr20 34667994 34668055 -37485827 + GC_rich Low_complexity Low_complexity 1 61 0 311 309 127 0 chr20 34668256 34668382 -37485500 + MIR SINE MIR 102 243 -19 351 302 218 8 chr20 34668450 34668825 -37485057 + L2 LINE L2 2637 3089 -183 216 0 0 0 chr20 34670931 34670955 -37482927 + (CAGCC)n Simple_repeat Simple_repeat 5 28 0 920 199 18 0 chr20 34671357 34671528 -37482354 - AluJo SINE Alu -19 293 120 398 210 68 25 chr20 34671552 34671696 -37482186 - MIR SINE MIR -63 145 8 198 323 16 63 chr20 34671959 34672086 -37481796 + MIR3 SINE MIR 39 159 -49 1513 158 62 15 chr20 34672227 34672499 -37481383 + AluJo SINE Alu 1 285 -27 563 254 5 74 chr20 34672651 34672818 -37481064 + L1ME3 LINE L1 5939 6089 -73 2091 131 0 0 chr20 34672818 34673116 -37480766 + AluSx SINE Alu 2 299 -13 563 254 5 74 chr20 34673116 34673165 -37480717 + L1ME3 LINE L1 6089 6140 -22 254 241 35 0 chr20 34673166 34673224 -37480658 + MIR SINE MIR 88 147 -115 932 210 136 29 chr20 34674180 34674452 -37479430 + MLT1F1 LTR MaLR 2 302 -265 417 180 79 0 chr20 34674508 34674597 -37479285 + MLT1F1 LTR MaLR 429 524 -43 1579 182 17 17 chr20 34674597 34674894 -37478988 - AluJo SINE Alu -15 297 1 298 273 236 6 chr20 34674983 34675148 -37478734 - MIR SINE MIR -50 212 10 202 275 138 0 chr20 34675180 34675260 -37478622 + L2 LINE L2 2311 2401 -913 188 300 171 0 chr20 34675711 34675781 -37478101 + L2 LINE L2 3186 3267 -5 198 325 65 0 chr20 34675948 34676025 -37477857 - MIR SINE MIR -171 91 10 2350 102 0 0 chr20 34676724 34677028 -37476854 + AluSx SINE Alu 1 304 -8 2001 154 3 0 chr20 34677046 34677357 -37476525 + AluSx SINE Alu 1 312 0 484 253 155 11 chr20 34678082 34678256 -37475626 + MIR SINE MIR 64 262 0 704 266 73 18 chr20 34679078 34679296 -37474586 + MIR SINE MIR 33 262 0 24 32 0 0 chr20 34679558 34679589 -37474293 + GC_rich Low_complexity Low_complexity 1 31 0 33 43 0 0 chr20 34679646 34679693 -37474189 + GC_rich Low_complexity Low_complexity 1 47 0 25 65 0 0 chr20 34679828 34679874 -37474008 + GC_rich Low_complexity Low_complexity 1 46 0 257 194 32 0 chr20 34680072 34680134 -37473748 + (CGGGG)n Simple_repeat Simple_repeat 4 67 0 218 241 28 32 chr20 34680608 34680723 -37473159 - L2 LINE L2 -2 3270 3116 1862 134 24 3 chr20 34680739 34681031 -37472851 + AluJb SINE Alu 3 300 -12 383 243 108 68 chr20 34681268 34681416 -37472466 + MER5A DNA MER1_type 5 158 -31 735 158 0 30 chr20 34681482 34681615 -37472267 - FLAM_A SINE Alu 0 133 5 337 315 105 33 chr20 34681893 34682074 -37471808 - MIR3 SINE MIR -9 199 6 306 278 173 8 chr20 34682256 34682389 -37471493 - MIR SINE MIR -6 256 102 255 318 150 6 chr20 34682728 34682901 -37470981 - MIR SINE MIR -37 225 28 615 190 107 0 chr20 34683224 34683345 -37470537 - L2 LINE L2 -1 3271 3138 292 364 136 16 chr20 34683725 34683909 -37469973 + MIR SINE MIR 2 207 -55 2368 84 3 0 chr20 34684029 34684339 -37469543 - AluSp SINE Alu -2 311 1 2222 97 7 3 chr20 34684339 34684638 -37469244 - AluSx SINE Alu -12 300 1 244 234 0 0 chr20 34684817 34684864 -37469018 + MIR SINE MIR 216 262 0 2230 119 0 0 chr20 34684944 34685255 -37468627 + AluSq SINE Alu 1 311 -2 2300 94 0 0 chr20 34685297 34685596 -37468286 + AluSx SINE Alu 1 299 -13 225 235 174 9 chr20 34685616 34685731 -37468151 + MIR3 SINE MIR 41 174 -34 390 183 183 48 chr20 34685982 34686108 -37467774 + MIR SINE MIR 119 261 -1 2329 91 0 3 chr20 34686184 34686491 -37467391 + AluSx SINE Alu 2 307 -5 1225 136 0 0 chr20 34686491 34686667 -37467215 + AluSg/x SINE Alu 134 309 -3 497 266 83 18 chr20 34686806 34686975 -37466907 + MER104 DNA MER2_type 1 180 0 790 330 99 4 chr20 34687658 34688434 -37465448 + L2 LINE L2 2447 3301 -12 2038 137 0 9 chr20 34688484 34688799 -37465083 + AluSx SINE Alu 1 312 0 2315 77 7 0 chr20 34688842 34689139 -37464743 - AluSp SINE Alu -14 299 1 1026 257 35 16 chr20 34689158 34689438 -37464444 + Charlie4a DNA MER1_type 1 289 -1672 2193 113 3 3 chr20 34689438 34689749 -37464133 - AluSx SINE Alu -1 311 1 1026 257 35 16 chr20 34689749 34689783 -37464099 + Charlie4a DNA MER1_type 289 321 -187 2230 99 3 0 chr20 34689784 34690087 -37463795 + AluSc SINE Alu 1 304 -5 28 29 0 0 chr20 34690379 34690414 -37463468 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr20 34690590 34690612 -37463270 + AT_rich Low_complexity Low_complexity 1 22 0 2125 112 3 0 chr20 34691392 34691687 -37462195 - AluSx SINE Alu -16 296 1 1301 171 72 0 chr20 34691708 34691959 -37461923 - AluJb SINE Alu -32 280 12 6830 61 17 40 chr20 34692033 34694270 -37459612 + SVA Other Other 13 1383 -3 22 0 0 0 chr20 34694270 34694292 -37459590 + AT_rich Low_complexity Low_complexity 1 22 0 8921 65 5 137 chr20 34694293 34695890 -37457992 + SVA Other Other 1 1386 0 308 256 13 0 chr20 34695904 34695982 -37457900 + L1MC5 LINE L1 7812 7890 -71 27 0 0 0 chr20 34695982 34696009 -37457873 + AT_rich Low_complexity Low_complexity 1 27 0 2144 83 0 10 chr20 34696009 34696297 -37457585 + AluY SINE Alu 1 285 -26 228 35 0 0 chr20 34696307 34696336 -37457546 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 685 303 67 0 chr20 34696856 34697051 -37456831 - MIR SINE MIR -53 209 2 1366 229 158 37 chr20 34697077 34697514 -37456368 - LTR16C LTR ERVL -1 490 1 3685 118 25 6 chr20 34697564 34698080 -37455802 - MER1A DNA MER1_type 0 527 2 407 220 11 0 chr20 34698276 34698367 -37455515 + MER5A DNA MER1_type 18 109 -80 2143 114 20 0 chr20 34698546 34698845 -37455037 - AluSx SINE Alu -7 305 1 2354 78 0 13 chr20 34698875 34699183 -37454699 + AluY SINE Alu 1 304 -7 527 256 42 73 chr20 34699363 34699469 -37454413 + MIR SINE MIR 20 119 -143 2270 103 0 0 chr20 34699469 34699781 -37454101 - AluSx SINE Alu 0 312 1 527 256 42 73 chr20 34699781 34699865 -37454017 + MIR SINE MIR 119 204 -58 738 199 0 21 chr20 34699866 34700007 -37453875 + FLAM_C SINE Alu 2 139 -4 462 246 120 0 chr20 34700101 34700243 -37453639 - MIR SINE MIR -103 159 1 962 188 211 4 chr20 34700264 34700455 -37453427 + MER33 DNA MER1_type 1 151 -2434 1653 133 72 4 chr20 34700455 34700733 -37453149 - AluJb SINE Alu -13 299 3 962 188 211 4 chr20 34700733 34700807 -37453075 + MER33 DNA MER1_type 151 321 -3 232 266 51 0 chr20 34700984 34701063 -37452819 - MIR SINE MIR -84 124 42 589 191 4 93 chr20 34701556 34701738 -37452144 - L1M4 LINE L1 -2827 3319 3163 1894 112 10 24 chr20 34701738 34702034 -37451848 - AluSx SINE Alu -12 300 9 589 191 4 93 chr20 34702034 34702097 -37451785 - L1M4 LINE L1 -2983 3163 3096 592 155 48 0 chr20 34702113 34702216 -37451666 - FLAM_C SINE Alu -23 120 13 1309 134 10 0 chr20 34702245 34702439 -37451443 - AluSg/x SINE Alu -11 301 106 26 30 0 0 chr20 34702465 34702498 -37451384 + AT_rich Low_complexity Low_complexity 1 33 0 1710 138 44 17 chr20 34702577 34702874 -37451008 + AluSx SINE Alu 2 306 -6 247 200 120 40 chr20 34703110 34703185 -37450697 - MIR SINE MIR -69 139 59 469 328 6 26 chr20 34703317 34704023 -37449859 + C-rich Low_complexity Low_complexity 1 691 0 637 288 173 11 chr20 34704444 34704715 -37449167 + L2 LINE L2 2994 3308 -5 228 314 25 42 chr20 34704730 34704848 -37449034 - L2 LINE L2 -39 3274 3159 457 219 149 0 chr20 34705142 34705256 -37448626 + FLAM_C SINE Alu 1 131 -2 1680 152 62 3 chr20 34705265 34705555 -37448327 + AluJo SINE Alu 1 307 -5 382 255 231 19 chr20 34705612 34705820 -37448062 - MER102a DNA MER1_type 0 330 79 1249 247 80 63 chr20 34705820 34706004 -37447878 + L2 LINE L2 2520 2699 -614 1929 118 16 30 chr20 34706004 34706174 -37447708 - AluSx SINE Alu -11 301 130 180 111 0 0 chr20 34706174 34706201 -37447681 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2121 88 0 11 chr20 34706201 34706484 -37447398 - AluSc SINE Alu -29 280 1 1929 118 16 30 chr20 34706484 34706617 -37447265 - AluSx SINE Alu -180 132 1 1249 247 80 63 chr20 34706617 34707226 -37446656 + L2 LINE L2 2699 3308 -5 1760 132 62 0 chr20 34707807 34708115 -37445767 + AluSx SINE Alu 1 312 0 365 290 26 0 chr20 34708406 34708519 -37445363 + MIR SINE MIR 30 147 -61 908 189 0 0 chr20 34708520 34708684 -37445198 - FRAM SINE Alu -12 164 1 1865 100 0 0 chr20 34708697 34708948 -37444934 - AluSx SINE Alu -13 299 49 2105 111 0 7 chr20 34708984 34709282 -37444600 - AluSx SINE Alu -16 296 1 593 302 77 70 chr20 34709321 34709393 -37444489 + L2 LINE L2 2590 2660 -612 2363 78 3 0 chr20 34709393 34709699 -37444183 - AluSp SINE Alu -6 307 1 593 302 77 70 chr20 34709699 34710290 -37443592 + L2 LINE L2 2660 3270 -2 368 271 138 44 chr20 34710425 34710481 -37443401 + L1ME4a LINE L1 5896 5945 -176 1876 129 0 11 chr20 34710481 34710761 -37443121 + AluSx SINE Alu 34 310 -2 368 271 138 44 chr20 34710761 34710907 -37442975 + L1ME4a LINE L1 5945 6117 -4 2702 7 0 0 chr20 34710914 34711214 -37442668 + AluYa5 SINE Alu 1 300 -11 301 263 13 0 chr20 34711405 34711481 -37442401 + MIR SINE MIR 64 140 -122 256 203 29 14 chr20 34711714 34711783 -37442099 + L1MC/D LINE L1 5680 5749 -2059 2466 64 0 3 chr20 34711784 34712096 -37441786 + AluY SINE Alu 1 311 0 407 333 24 12 chr20 34712193 34712358 -37441524 + MIR SINE MIR 10 176 -86 274 229 167 0 chr20 34712355 34712451 -37441431 - L2 LINE L2 0 3313 3202 * 2183 120 0 0 chr20 34712451 34712751 -37441131 - AluSx SINE Alu -12 300 1 531 231 184 0 chr20 34712751 34712898 -37440984 - MIR SINE MIR -44 218 45 248 255 157 29 chr20 34712926 34713028 -37440854 + L2 LINE L2 3188 3302 -11 181 162 54 0 chr20 34712995 34713032 -37440850 + MIR SINE MIR 223 261 -1 * 199 186 35 139 chr20 34713281 34713367 -37440515 - MIR3 SINE MIR -40 168 92 1958 78 22 11 chr20 34714288 34714558 -37439324 - AluSx SINE Alu -26 286 14 1143 278 71 27 chr20 34714579 34714906 -37438976 + L2 LINE L2 2770 3126 -187 2110 119 3 3 chr20 34714906 34715209 -37438673 - AluSg SINE Alu -7 303 1 1143 278 71 27 chr20 34715209 34715397 -37438485 + L2 LINE L2 3126 3304 -9 923 91 15 8 chr20 34715767 34715899 -37437983 + AluSq/x SINE Alu 1 133 -179 1625 126 49 4 chr20 34715944 34716207 -37437675 + AluJb SINE Alu 11 285 -27 1704 132 7 4 chr20 34716235 34716507 -37437375 + AluJb SINE Alu 1 273 -39 2499 53 0 0 chr20 34716512 34716813 -37437069 - AluY SINE Alu -10 301 1 2350 91 3 0 chr20 34717380 34717689 -37436193 + AluSx SINE Alu 1 310 -2 1149 124 0 0 chr20 34717690 34717859 -37436023 + AluSg/x SINE Alu 126 294 -16 1918 115 0 7 chr20 34718316 34718594 -37435288 - AluSx SINE Alu -1 311 36 1910 104 0 52 chr20 34718614 34718923 -37434959 - AluSg SINE Alu -17 293 1 1870 102 71 0 chr20 34718949 34719242 -37434640 - AluSx SINE Alu 0 312 1 589 122 56 28 chr20 34719243 34719350 -37434532 - MLT1B LTR MaLR -280 110 1 233 179 0 0 chr20 34719888 34719927 -37433955 - Alu SINE Alu -11 297 259 1489 140 4 4 chr20 34719979 34720215 -37433667 - AluSx SINE Alu -76 236 1 936 95 24 0 chr20 34720340 34720466 -37433416 + AluY SINE Alu 1 129 -182 703 252 161 24 chr20 34720529 34720870 -37433012 + L2 LINE L2 2925 3312 -1 1948 140 7 0 chr20 34720918 34721226 -37432656 + AluSx SINE Alu 1 310 -2 794 158 0 8 chr20 34721495 34721628 -37432254 - FLAM_C SINE Alu 0 133 2 1534 202 31 57 chr20 34721807 34722262 -37431620 - LTR47B LTR ERVL 0 443 1 498 186 0 0 chr20 34722350 34722436 -37431446 - AluJ/FLAM SINE Alu -226 86 1 2801 133 18 70 chr20 34722632 34723117 -37430765 + MER31A LTR ERV1 1 510 25 1550 177 9 38 chr20 34723117 34723434 -37430448 - AluJb SINE Alu -2 310 3 2206 84 3 40 chr20 34723442 34723764 -37430118 - AluSp SINE Alu -3 310 1 2801 133 18 70 chr20 34723764 34723781 -37430101 + MER31A LTR ERV1 469 485 0 1685 166 7 0 chr20 34723875 34724159 -37429723 - AluJo SINE Alu -25 287 2 2219 85 7 0 chr20 34724200 34724495 -37429387 - AluSg SINE Alu -13 297 1 224 308 13 39 chr20 34724537 34724615 -37429267 + L2 LINE L2 3196 3271 -1 1017 147 5 32 chr20 34724815 34725005 -37428877 + AluJo SINE Alu 7 191 -121 212 254 5 79 chr20 34725702 34725891 -37427991 + (CGGGG)n Simple_repeat Simple_repeat 2 176 0 2148 94 0 14 chr20 34726607 34726769 -37427113 - AluSx SINE Alu -17 295 137 2177 65 0 59 chr20 34726769 34727092 -37426790 - AluY SINE Alu -7 304 1 2148 94 0 14 chr20 34727092 34727226 -37426656 - AluSx SINE Alu -175 137 3 453 337 84 7 chr20 34727842 34728127 -37425755 - L2 LINE L2 -541 2773 2467 2050 128 0 3 chr20 34728264 34728561 -37425321 - AluSx SINE Alu -16 296 1 186 43 0 0 chr20 34728572 34728595 -37425287 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1957 110 14 3 chr20 34728595 34728885 -37424997 - AluSx SINE Alu -19 293 1 1518 179 61 0 chr20 34728889 34729169 -37424713 - AluJo SINE Alu -11 301 5 2159 166 104 17 chr20 34729181 34729662 -37424220 - L1MD1 LINE L1 -2 6240 5718 1569 103 0 0 chr20 34729814 34730037 -37423845 + LTR8A LTR ERV1 1 223 -504 1283 94 6 6 chr20 34730079 34730259 -37423623 - AluSg/x SINE Alu -46 264 85 1669 162 67 80 chr20 34730683 34730850 -37423032 - LTR8A LTR ERV1 0 727 559 2228 103 0 0 chr20 34730850 34731176 -37422706 - AluY SINE Alu 0 311 1 1669 162 67 80 chr20 34731176 34731409 -37422473 - LTR8A LTR ERV1 -168 559 332 2250 97 3 0 chr20 34731411 34731709 -37422173 + AluSp SINE Alu 1 299 -14 787 180 0 0 chr20 34731713 34731841 -37422041 + FLAM_C SINE Alu 2 129 -14 2255 106 9 0 chr20 34731843 34732182 -37421700 - LTR8A LTR ERV1 -385 342 1 2134 89 0 0 chr20 34732519 34732823 -37421059 - AluSg1 SINE Alu 0 304 1 1474 270 52 44 chr20 34733260 34733427 -37420455 - MLT1J LTR MaLR -2 509 345 2217 89 3 0 chr20 34733427 34733719 -37420163 - AluSq SINE Alu -20 293 1 1474 270 52 44 chr20 34733719 34734054 -37419828 - MLT1J LTR MaLR -166 345 3 1493 184 3 33 chr20 34734059 34734363 -37419519 - AluJb SINE Alu -17 295 1 2166 116 3 3 chr20 34734949 34735260 -37418622 - AluSx SINE Alu -1 311 1 496 283 35 0 chr20 34735356 34735501 -37418381 + MIR SINE MIR 35 184 -78 426 261 158 30 chr20 34735532 34735735 -37418147 - MLT1J LTR MaLR -50 461 233 2259 77 3 3 chr20 34735750 34736050 -37417832 - AluSg SINE Alu -10 300 1 229 143 0 0 chr20 34736051 34736086 -37417796 - Alu SINE Alu -183 120 86 936 200 4 65 chr20 34736086 34736316 -37417566 - AluJo SINE Alu -92 220 5 386 284 80 34 chr20 34736320 34736496 -37417386 - MLT1J LTR MaLR -286 225 42 545 153 8 93 chr20 34736500 34736579 -37417303 + FAM SINE Alu 74 158 -163 2241 100 0 3 chr20 34736579 34736888 -37416994 - AluSq SINE Alu -5 308 1 2162 101 7 13 chr20 34736891 34737197 -37416685 - AluSx SINE Alu -7 305 2 545 153 8 93 chr20 34737197 34737231 -37416651 + FAM SINE Alu 160 181 -4 435 333 129 29 chr20 34737365 34737560 -37416322 - L2 LINE L2 -1 3271 3032 2198 107 0 3 chr20 34737560 34737868 -37416014 + AluSq SINE Alu 6 312 -1 435 333 129 29 chr20 34737868 34737981 -37415901 - L2 LINE L2 -240 3032 2932 2266 94 0 0 chr20 34738148 34738447 -37415435 - AluSx SINE Alu -13 299 1 536 236 9 0 chr20 34738865 34738975 -37414907 - L2 LINE L2 0 3272 3162 24 0 0 0 chr20 34739176 34739200 -37414682 + AT_rich Low_complexity Low_complexity 1 24 0 1824 253 87 32 chr20 34739306 34739485 -37414397 - L2 LINE L2 -337 2977 2809 2487 43 3 0 chr20 34739485 34739784 -37414098 - AluY SINE Alu -11 300 1 2205 96 0 7 chr20 34739784 34740087 -37413795 - AluSc SINE Alu -8 301 1 1824 253 87 32 chr20 34740087 34740656 -37413226 - L2 LINE L2 -504 2810 2187 2934 7 0 0 chr20 34740889 34741198 -37412684 + AluYa5 SINE Alu 1 309 -2 1984 109 69 0 chr20 34741269 34741544 -37412338 - AluSx SINE Alu -13 299 6 2475 78 0 0 chr20 34741632 34741925 -37411957 - AluSc SINE Alu -16 293 1 1123 120 6 13 chr20 34742065 34742223 -37411659 - AluJb SINE Alu -155 157 1 475 265 15 8 chr20 34742223 34742355 -37411527 - MIR SINE MIR -110 152 20 216 189 0 0 chr20 34742396 34742433 -37411449 + (CA)n Simple_repeat Simple_repeat 1 37 0 2170 125 0 14 chr20 34742856 34743152 -37410730 - AluSx SINE Alu -20 292 1 1087 70 0 56 chr20 34743152 34743295 -37410587 - AluSq/x SINE Alu -178 135 1 2337 111 10 0 chr20 34743299 34743605 -37410277 - AluSx SINE Alu -3 309 1 699 177 0 8 chr20 34743687 34743811 -37410071 - FLAM_C SINE Alu -19 124 2 1781 152 0 55 chr20 34744025 34744200 -37409682 - AluJo SINE Alu -19 293 141 2376 98 0 0 chr20 34744200 34744496 -37409386 - AluSq SINE Alu -17 296 1 1781 152 0 55 chr20 34744496 34744629 -37409253 - AluJo SINE Alu -171 141 2 444 312 21 11 chr20 34744634 34744823 -37409059 - L1ME LINE L1 -297 5824 5634 1254 228 61 109 chr20 34744837 34745115 -37408767 - MER68 LTR ERV1 -15 547 303 1783 145 28 14 chr20 34745115 34745424 -37408458 - AluJb SINE Alu 0 313 1 1254 228 61 109 chr20 34745424 34745666 -37408216 - MER68 LTR ERV1 -259 303 51 280 173 19 0 chr20 34746124 34746176 -37407706 - MER68 LTR ERV1 -507 55 3 2408 82 13 0 chr20 34746198 34746503 -37407379 - AluY SINE Alu -2 309 1 198 206 0 0 chr20 34746772 34746840 -37407042 + (CCA)n Simple_repeat Simple_repeat 2 69 0 303 209 109 36 chr20 34747046 34747156 -37406726 - L2 LINE L2 -25 3288 3171 1289 227 183 29 chr20 34747349 34747825 -37406057 - MLT1H LTR MaLR 0 549 1 2239 107 3 10 chr20 34748501 34748800 -37405082 - AluSx SINE Alu -15 297 1 276 200 17 0 chr20 34748821 34748881 -37405001 - LTR33A LTR ERVL 0 523 463 726 142 15 30 chr20 34748883 34749017 -37404865 - FLAM_C SINE Alu -1 132 1 2068 157 0 3 chr20 34749144 34749449 -37404433 - AluJb SINE Alu -8 304 1 1782 172 0 0 chr20 34749496 34749769 -37404113 + AluJb SINE Alu 1 273 -39 2430 109 0 3 chr20 34749911 34750223 -37403659 - AluSx SINE Alu -1 311 1 1064 226 26 0 chr20 34750278 34750512 -37403370 - MIR SINE MIR 0 262 23 1306 267 70 53 chr20 34750986 34751473 -37402409 - MLT1J LTR MaLR -14 497 3 521 242 46 50 chr20 34751814 34752064 -37401818 - L2 LINE L2 -307 3006 2738 2351 86 3 0 chr20 34752849 34753139 -37400743 - AluSp SINE Alu -22 291 1 591 266 78 0 chr20 34753142 34753313 -37400569 - MER113 DNA MER1_type? -43 478 285 372 43 0 0 chr20 34753313 34753359 -37400523 + (GA)n Simple_repeat Simple_repeat 1 46 0 591 266 78 0 chr20 34753359 34753405 -37400477 - MER113 DNA MER1_type? -236 285 244 916 199 73 34 chr20 34753406 34753612 -37400270 - MER20 DNA MER1_type 0 219 6 953 150 4 97 chr20 34753631 34753676 -37400206 + MER3 DNA MER1_type 4 52 -157 2378 109 0 0 chr20 34753676 34753978 -37399904 + AluSx SINE Alu 1 302 -10 953 150 4 97 chr20 34753978 34754101 -37399781 + MER3 DNA MER1_type 52 148 -61 2217 134 0 0 chr20 34754101 34754399 -37399483 - AluJb SINE Alu -14 298 1 953 150 4 97 chr20 34754399 34754456 -37399426 + MER3 DNA MER1_type 148 209 0 869 218 0 0 chr20 34754539 34754704 -37399178 - FRAM SINE Alu -1 175 11 252 180 99 54 chr20 34754705 34754776 -37399106 - MER113 DNA MER1_type? -392 129 54 553 263 32 55 chr20 34754776 34754821 -37399061 - MLT1L LTR MaLR 0 615 570 2282 114 3 0 chr20 34754821 34755119 -37398763 - AluSx SINE Alu -13 299 1 553 263 32 55 chr20 34755119 34755290 -37398592 - MLT1L LTR MaLR -45 570 404 368 190 0 38 chr20 34755673 34755752 -37398130 + MIR SINE MIR 74 149 -113 428 277 25 8 chr20 34755761 34755880 -37398002 - MER117 DNA MER1_type -1 196 76 632 168 37 0 chr20 34755888 34755995 -37397887 - Tigger7 DNA MER2_type -621 112 2 359 228 101 47 chr20 34755995 34756027 -37397855 + L1MC4 LINE L1 7037 7066 -976 183 80 0 0 chr20 34756027 34756052 -37397830 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 359 228 101 47 chr20 34756052 34756072 -37397810 + L1MC4 LINE L1 7066 7083 -959 3059 58 0 2 chr20 34756072 34756472 -37397410 - L1PA8 LINE L1 0 6172 5774 359 228 101 47 chr20 34756472 34756567 -37397315 + L1MC4 LINE L1 7083 7193 -849 673 245 0 50 chr20 34756567 34756726 -37397156 + Tigger3(Golem) DNA MER2_type 1 2577 -452 595 195 6 69 chr20 34756743 34756861 -37397021 - L1PB4 LINE L1 -11 6145 6038 2057 150 7 0 chr20 34756861 34757154 -37396728 - AluSx SINE Alu -17 295 1 595 195 6 69 chr20 34757154 34757194 -37396688 - L1PB4 LINE L1 -118 6038 5997 304 167 0 0 chr20 34757403 34757457 -37396425 - MER33 DNA MER1_type 0 324 271 889 112 9 0 chr20 34757457 34757573 -37396309 + AluJb SINE Alu 1 117 -195 2570 52 0 10 chr20 34757576 34757882 -37396000 - AluY SINE Alu -8 303 1 272 86 99 49 chr20 34757951 34758032 -37395850 - MER33 DNA MER1_type -46 317 233 377 256 49 0 chr20 34758035 34758117 -37395765 + L1MC4 LINE L1 6615 6700 -1342 836 66 0 0 chr20 34758117 34758223 -37395659 - AluSg/x SINE Alu -1 311 206 713 189 80 40 chr20 34758223 34758362 -37395520 - MER33 DNA MER1_type -2375 210 59 1778 172 10 17 chr20 34758362 34758681 -37395201 - AluJo SINE Alu 0 312 3 713 189 80 40 chr20 34758681 34758742 -37395140 - MER33 DNA MER1_type -2526 59 2 1879 160 6 29 chr20 34758921 34759233 -37394649 - AluJb SINE Alu -7 305 1 264 167 19 19 chr20 34759294 34759348 -37394534 - L2 LINE L2 -1 3271 3218 2374 96 0 7 chr20 34759435 34759738 -37394144 - AluSq SINE Alu -10 303 3 2143 130 0 0 chr20 34759750 34760050 -37393832 - AluSx SINE Alu -12 300 1 580 102 23 0 chr20 34760937 34761025 -37392857 - AluSg/x SINE Alu -14 296 207 * 729 99 10 0 chr20 34761023 34761124 -37392758 - AluS SINE Alu -211 102 1 526 251 97 100 chr20 34761298 34761668 -37392214 - MLT1J LTR MaLR -23 488 120 2219 112 7 0 chr20 34761682 34761978 -37391904 - AluSx SINE Alu -14 298 1 2034 145 3 0 chr20 34761982 34762278 -37391604 - AluSx SINE Alu -15 297 1 891 252 11 18 chr20 34762390 34762664 -37391218 - LTR37B LTR ERV1 0 468 197 317 203 76 38 chr20 34762804 34762883 -37390999 + MER5A DNA MER1_type 1 82 -107 234 232 0 0 chr20 34762907 34762963 -37390919 + G-rich Low_complexity Low_complexity 1 56 0 374 189 0 27 chr20 34763015 34763089 -37390793 - LTR37B LTR ERV1 -390 78 7 2321 98 0 0 chr20 34763184 34763471 -37390411 + AluSx SINE Alu 1 287 -25 654 139 74 25 chr20 34764255 34764377 -37389505 + FLAM_C SINE Alu 2 129 -14 2500 72 0 7 chr20 34764394 34764700 -37389182 + AluY SINE Alu 1 304 -7 2148 120 20 3 chr20 34764802 34765101 -37388781 - AluJb SINE Alu -8 304 1 2047 129 20 3 chr20 34765289 34765591 -37388291 + AluJo SINE Alu 1 307 -5 286 355 108 0 chr20 34766125 34766356 -37387526 - L2 LINE L2 -213 3059 2804 421 247 198 12 chr20 34766643 34766805 -37387077 - MIR SINE MIR -21 241 50 815 269 33 25 chr20 34767003 34767248 -37386634 + MIR SINE MIR 6 252 -10 265 284 23 0 chr20 34767269 34767357 -37386525 - MLT1J LTR MaLR 0 511 422 2081 114 0 56 chr20 34767553 34767877 -37386005 + AluSx SINE Alu 1 306 -6 317 280 120 51 chr20 34767888 34768063 -37385819 - L1ME4a LINE L1 0 6121 5935 365 247 100 66 chr20 34768182 34768241 -37385641 - L1MC4a LINE L1 -202 5919 5863 1827 148 72 0 chr20 34768241 34768518 -37385364 + AluJb SINE Alu 1 297 -15 365 247 100 66 chr20 34768518 34768754 -37385128 - L1MC4a LINE L1 -258 5863 5613 2318 96 3 3 chr20 34768763 34769064 -37384818 - AluY SINE Alu -10 301 1 22 35 0 0 chr20 34769064 34769093 -37384789 + AT_rich Low_complexity Low_complexity 1 29 0 1919 167 0 0 chr20 34769268 34769555 -37384327 - AluJo SINE Alu -25 287 1 31 0 0 0 chr20 34769610 34769641 -37384241 + AT_rich Low_complexity Low_complexity 1 31 0 1865 156 0 46 chr20 34769641 34769948 -37383934 - AluJb SINE Alu -19 293 1 1951 151 10 0 chr20 34769948 34770240 -37383642 - AluJb SINE Alu -17 295 1 1213 182 170 0 chr20 34770242 34770377 -37383505 - AluJo SINE Alu -16 296 185 189 0 0 0 chr20 34770377 34770398 -37383484 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1213 182 170 0 chr20 34770398 34770515 -37383367 - AluJo SINE Alu -127 185 1 1999 195 15 73 chr20 34770515 34770593 -37383289 - L1MC4 LINE L1 -209 7833 7752 1882 167 0 29 chr20 34770593 34770905 -37382977 + AluJb SINE Alu 7 309 -3 2385 97 3 3 chr20 34770908 34771218 -37382664 + AluSx SINE Alu 1 310 -2 1999 195 15 73 chr20 34771218 34771657 -37382225 - L1MC4 LINE L1 -292 7750 7342 2379 109 0 3 chr20 34771853 34772166 -37381716 - AluSx SINE Alu 0 312 1 2748 117 5 7 chr20 34772556 34772985 -37380897 - MSTA LTR MaLR 0 428 1 2385 106 0 0 chr20 34773004 34773306 -37380576 - AluSx SINE Alu -10 302 1 1119 249 82 18 chr20 34773508 34773959 -37379923 - L2 LINE L2 -114 3199 2778 2428 92 0 7 chr20 34773959 34774265 -37379617 - AluSx SINE Alu -8 304 1 1661 176 36 30 chr20 34774265 34774567 -37379315 - AluJo SINE Alu -8 304 1 1119 249 82 18 chr20 34774567 34774742 -37379140 - L2 LINE L2 -534 2779 2532 1913 146 66 0 chr20 34775247 34775535 -37378347 - AluJb SINE Alu -5 307 1 878 152 8 0 chr20 34775538 34775663 -37378219 - AluJo/FLAM SINE Alu -186 126 1 614 223 73 90 chr20 34775707 34776008 -37377874 - L1MC5 LINE L1 -312 7649 7354 295 343 169 12 chr20 34776117 34776289 -37377593 - MIR SINE MIR 0 262 64 2151 107 7 0 chr20 34776429 34776743 -37377139 + AluSp SINE Alu 1 316 0 325 326 61 0 chr20 34776962 34777094 -37376788 - L2 LINE L2 -211 3061 2922 424 233 27 34 chr20 34777454 34777600 -37376282 + CT-rich Low_complexity Low_complexity 3 147 0 634 228 7 28 chr20 34777611 34778070 -37375812 + C-rich Low_complexity Low_complexity 1 448 0 2381 97 3 3 chr20 34778162 34778471 -37375411 - AluSq SINE Alu -4 309 1 21 36 0 0 chr20 34778612 34778640 -37375242 + AT_rich Low_complexity Low_complexity 1 28 0 381 214 41 20 chr20 34778768 34778866 -37375016 + MER112 DNA MER1_type 17 116 -144 2155 126 20 0 chr20 34778891 34779192 -37374690 - AluSx SINE Alu -5 307 1 342 251 112 65 chr20 34779508 34779583 -37374299 - L1MC/D LINE L1 -1988 5820 5750 1954 101 109 7 chr20 34779583 34779859 -37374023 - AluSg SINE Alu -6 304 1 342 251 112 65 chr20 34779859 34779998 -37373884 - L1MC/D LINE L1 -2058 5750 5596 838 153 6 6 chr20 34779998 34780155 -37373727 + L1MB3 LINE L1 6025 6181 -2 2341 114 3 0 chr20 34780243 34780549 -37373333 + AluSx SINE Alu 2 308 -4 324 299 8 26 chr20 34780860 34780977 -37372905 - L1MC4a LINE L1 -1910 5898 5784 407 300 29 24 chr20 34781226 34781396 -37372486 + MIR SINE MIR 26 196 -66 274 287 54 23 chr20 34781473 34781602 -37372280 + L2 LINE L2 2458 2590 -724 537 239 143 18 chr20 34781605 34781690 -37372192 + L2 LINE L2 2700 2773 -540 2330 100 0 19 chr20 34781690 34781999 -37371883 + AluSx SINE Alu 1 303 -9 537 239 143 18 chr20 34781999 34782249 -37371633 + L2 LINE L2 2773 3073 -240 1623 133 125 0 chr20 34782634 34782898 -37370984 - AluSx SINE Alu -5 297 1 201 235 224 31 chr20 34783290 34783388 -37370494 - L2 LINE L2 -34 3238 3122 1045 153 27 68 chr20 34783583 34783628 -37370254 - MER20 DNA MER1_type 0 219 174 2317 93 3 7 chr20 34783628 34783929 -37369953 - AluSx SINE Alu -12 300 1 1045 153 27 68 chr20 34783929 34784105 -37369777 - MER20 DNA MER1_type -45 174 7 370 250 97 18 chr20 34784243 34784482 -37369400 - L2 LINE L2 -294 3019 2761 852 258 19 0 chr20 34785598 34785811 -37368071 + MIR SINE MIR 36 252 -10 2323 117 0 0 chr20 34785963 34786263 -37367619 + AluSx SINE Alu 1 300 -12 1114 158 0 27 chr20 34786263 34786447 -37367435 + AluJb SINE Alu 134 312 0 570 260 32 7 chr20 34787230 34787384 -37366498 - MIR SINE MIR -92 170 13 2247 109 0 13 chr20 34787548 34787852 -37366030 + AluSq SINE Alu 1 300 -13 368 186 59 49 chr20 34788003 34788105 -37365777 - MIR SINE MIR -100 162 60 1870 90 23 30 chr20 34788161 34788465 -37365417 + AluSc SINE Alu 27 309 0 1910 118 15 90 chr20 34788599 34788931 -37364951 + AluSx SINE Alu 3 309 -3 669 255 22 5 chr20 34788931 34789115 -37364767 + MIR SINE MIR 22 208 -54 322 314 51 0 chr20 34789230 34789348 -37364534 + L1M4 LINE L1 4072 4195 -1951 2056 127 0 7 chr20 34789448 34789766 -37364116 + AluSg SINE Alu 1 316 0 653 250 121 8 chr20 34789767 34790023 -37363859 + L2 LINE L2 3028 3312 -1 598 257 96 54 chr20 34790620 34791043 -37362839 - L2 LINE L2 0 3313 2705 309 183 0 0 chr20 34791064 34791124 -37362758 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 2081 129 28 0 chr20 34791152 34791439 -37362443 - AluSx SINE Alu -17 295 1 294 310 23 0 chr20 34791443 34791530 -37362352 - L2 LINE L2 -602 2712 2624 2011 169 164 2 chr20 34791531 34791963 -37361919 - MLT1D LTR MaLR -1 504 3 794 186 0 0 chr20 34791963 34792103 -37361779 - L2 LINE L2 -686 2628 2489 719 218 166 26 chr20 34792526 34792755 -37361127 + MIR SINE MIR 2 262 0 504 266 72 48 chr20 34792762 34792900 -37360982 + MIR SINE MIR 51 197 -65 2009 138 0 0 chr20 34792900 34793204 -37360678 + AluJb SINE Alu 1 304 -8 504 266 72 48 chr20 34793204 34793272 -37360610 + MIR SINE MIR 197 262 0 213 286 286 0 chr20 34793376 34793460 -37360422 - MIR SINE MIR -108 154 47 2313 65 10 19 chr20 34793530 34793837 -37360045 + AluSq SINE Alu 1 304 -9 1355 135 166 15 chr20 34793846 34794105 -37359777 + AluSg SINE Alu 1 298 -2 1248 153 4 69 chr20 34794105 34794143 -37359739 - L1MB5 LINE L1 -9 6165 6126 2095 106 3 10 chr20 34794143 34794446 -37359436 + AluSx SINE Alu 1 301 -11 1248 153 4 69 chr20 34794446 34794668 -37359214 - L1MB5 LINE L1 -48 6126 5922 1725 138 0 38 chr20 34794682 34794973 -37358909 - AluJo SINE Alu -32 280 1 4528 195 41 11 chr20 34794973 34795942 -37357940 - L1M4 LINE L1 -1195 4951 3950 197 33 33 0 chr20 34795942 34795972 -37357910 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4528 195 41 11 chr20 34795972 34795993 -37357889 - L1M4 LINE L1 -2196 3950 3931 2215 82 14 0 chr20 34796091 34796385 -37357497 - AluSp SINE Alu -15 298 1 437 223 32 11 chr20 34796440 34796534 -37357348 + MIR SINE MIR 78 173 -89 1707 180 3 3 chr20 34796639 34796950 -37356932 - AluJo SINE Alu -1 311 1 1964 122 0 7 chr20 34796957 34797285 -37356597 - AluSx SINE Alu 0 326 1 1087 217 89 51 chr20 34797296 34797632 -37356250 - L1ME3 LINE L1 -1 6161 5813 483 261 6 83 chr20 34797792 34797871 -37356011 - MER117 DNA MER1_type -3 194 135 1796 162 3 0 chr20 34797871 34798168 -37355714 - AluJo SINE Alu -14 298 1 483 261 6 83 chr20 34798168 34798268 -37355614 - MER117 DNA MER1_type -62 135 29 2081 147 11 40 chr20 34798269 34798644 -37355238 + THE1B LTR MaLR 1 364 0 2399 56 0 3 chr20 34799414 34799720 -37354162 - AluY SINE Alu -1 310 6 436 269 145 51 chr20 34800052 34800286 -37353596 - MIR SINE MIR 0 262 7 232 218 0 18 chr20 34800305 34800360 -37353522 - L2 LINE L2 -287 2985 2932 353 264 39 62 chr20 34800374 34800464 -37353418 + MIR SINE MIR 98 186 -76 2269 93 0 0 chr20 34800464 34800764 -37353118 - AluSg SINE Alu -10 300 1 353 264 39 62 chr20 34800764 34800802 -37353080 + MIR SINE MIR 186 223 -39 5118 134 31 32 chr20 34800868 34801390 -37352492 - Tigger7 DNA MER2_type 0 2487 1966 1821 164 0 3 chr20 34801390 34801688 -37352194 - AluJb SINE Alu -15 297 1 5118 134 31 32 chr20 34801688 34801704 -37352178 - Tigger7 DNA MER2_type -521 1966 1951 2109 120 13 0 chr20 34801704 34802005 -37351877 - AluSx SINE Alu -7 305 1 5118 134 31 32 chr20 34802005 34802339 -37351543 - Tigger7 DNA MER2_type -536 1951 1615 1829 159 3 0 chr20 34802354 34802650 -37351232 - AluJo SINE Alu -15 297 1 2337 60 0 3 chr20 34802659 34802957 -37350925 - AluY SINE Alu -14 297 1 2484 36 0 10 chr20 34802957 34803261 -37350621 - AluY SINE Alu -10 301 1 2055 112 0 42 chr20 34803268 34803580 -37350302 - AluSq SINE Alu -14 299 1 3966 154 47 87 chr20 34803582 34804418 -37349464 - Tigger7 DNA MER2_type -1685 802 1 313 253 7 34 chr20 34804831 34804951 -37348931 + G-rich Low_complexity Low_complexity 6 123 -24 291 28 0 0 chr20 34804951 34804987 -37348895 + (CCGAG)n Simple_repeat Simple_repeat 3 38 0 313 253 7 34 chr20 34804987 34805012 -37348870 + G-rich Low_complexity Low_complexity 123 147 0 392 292 89 12 chr20 34805714 34805882 -37348000 + MIR3 SINE MIR 12 192 -16 207 196 87 0 chr20 34806260 34806306 -37347576 + MIR SINE MIR 67 116 -92 208 211 0 0 chr20 34806325 34806363 -37347519 + L2 LINE L2 3261 3298 -15 627 304 137 21 chr20 34806421 34807103 -37346779 - L2 LINE L2 -10 3303 2540 2156 99 0 0 chr20 34807268 34807586 -37346296 - AluSg SINE Alu 0 318 1 1396 174 60 30 chr20 34808200 34808499 -37345383 - AluJo SINE Alu -4 308 1 608 268 132 0 chr20 34808648 34808838 -37345044 + MIR SINE MIR 47 261 -1 337 275 54 62 chr20 34808848 34809106 -37344776 - L2 LINE L2 -685 2629 2374 450 269 59 8 chr20 34809147 34809266 -37344616 + L2 LINE L2 3147 3271 -1 255 203 68 0 chr20 34809265 34809324 -37344558 - MIR SINE MIR -86 176 114 * 205 305 42 32 chr20 34809426 34809521 -37344361 - L2 LINE L2 -5 3267 3172 288 333 44 9 chr20 34809729 34809843 -37344039 - L2 LINE L2 0 3313 3196 216 276 46 23 chr20 34809857 34809944 -37343938 + MIR SINE MIR 151 239 -23 562 286 42 21 chr20 34811505 34811694 -37342188 + MIR SINE MIR 41 233 -29 493 281 38 71 chr20 34811918 34812128 -37341754 - L3 LINE CR1 -42 1535 1333 566 281 82 63 chr20 34812267 34812463 -37341419 - L3 LINE CR1 -257 1320 1116 2239 95 0 7 chr20 34812463 34812767 -37341115 - AluSx SINE Alu -10 302 1 566 281 82 63 chr20 34812767 34812840 -37341042 - L3 LINE CR1 -461 1116 1046 415 357 7 0 chr20 34813220 34813363 -37340519 + MIR SINE MIR 5 148 -114 330 226 267 75 chr20 34813388 34813441 -37340441 + MER5A DNA MER1_type 9 51 -138 2265 81 0 34 chr20 34813441 34813761 -37340121 + AluY SINE Alu 1 309 -2 330 226 267 75 chr20 34813761 34813853 -37340029 + MER5A DNA MER1_type 51 182 -7 274 310 70 49 chr20 34814006 34814148 -37339734 - L2 LINE L2 -4 3309 3165 2275 96 0 0 chr20 34814660 34814962 -37338920 + AluSx SINE Alu 1 302 -10 663 205 8 0 chr20 34815197 34815314 -37338568 + FLAM_C SINE Alu 1 118 -15 1576 172 19 25 chr20 34815366 34815680 -37338202 - AluJb SINE Alu 0 312 1 207 0 0 0 chr20 34815689 34815712 -37338170 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2089 96 0 4 chr20 34815720 34816000 -37337882 - AluSx SINE Alu -33 279 1 2220 95 20 3 chr20 34816337 34816643 -37337239 - AluY SINE Alu 0 311 1 258 330 53 0 chr20 34816761 34816855 -37337027 - MIR SINE MIR -52 210 112 1629 161 0 25 chr20 34816947 34817096 -37336786 - AluJo SINE Alu -33 279 139 1695 134 30 37 chr20 34817096 34817395 -37336487 - AluSx SINE Alu -15 297 1 1629 161 0 25 chr20 34817395 34817531 -37336351 - AluJo SINE Alu -173 139 1 224 262 159 90 chr20 34817745 34817890 -37335992 - MIR3 SINE MIR -49 159 5 1067 147 27 71 chr20 34818210 34818435 -37335447 - MER20 DNA MER1_type -1 218 4 217 311 107 19 chr20 34818507 34818610 -37335272 - MIR3 SINE MIR -11 197 86 370 292 80 29 chr20 34820751 34820888 -37332994 + MIR3 SINE MIR 57 200 -8 412 273 91 28 chr20 34821736 34821879 -37332003 - MIR3 SINE MIR -27 181 30 228 222 105 117 chr20 34822128 34822290 -37331592 + MIR SINE MIR 73 232 -30 483 177 81 24 chr20 34822330 34822454 -37331428 - L1ME3 LINE L1 -1 6161 6031 291 297 93 25 chr20 34822553 34822671 -37331211 - L2 LINE L2 -2 3270 3145 342 188 197 51 chr20 34823520 34823637 -37330245 - MIR3 SINE MIR -31 177 44 1386 193 32 98 chr20 34823930 34824330 -37329552 - MLT1A2 LTR MaLR 0 374 1 1520 192 7 7 chr20 34824489 34824651 -37329231 - AluJb SINE Alu -5 307 143 2044 79 55 17 chr20 34824651 34824941 -37328941 - AluSx SINE Alu -11 301 1 1520 192 7 7 chr20 34824941 34825085 -37328797 - AluJb SINE Alu -168 144 1 883 153 0 7 chr20 34825085 34825229 -37328653 - AluJo SINE Alu -169 143 1 1936 125 0 42 chr20 34826331 34826644 -37327238 - AluJo SINE Alu -12 300 1 388 353 106 28 chr20 34826802 34827264 -37326618 + L2 LINE L2 2378 2875 -439 201 239 107 122 chr20 34827336 34827533 -37326349 + L2 LINE L2 3067 3260 -12 698 232 98 21 chr20 34827573 34827858 -37326024 - L1MEc LINE L1 -2749 3466 3160 1058 157 25 60 chr20 34827858 34828093 -37325789 - AluJo SINE Alu -4 308 82 1062 204 72 0 chr20 34828093 34828348 -37325534 - L1MEc LINE L1 -3060 3155 2879 1983 112 23 10 chr20 34828348 34828651 -37325231 - AluSx SINE Alu -5 307 1 936 265 141 28 chr20 34828702 34829217 -37324665 - L1MEc LINE L1 -4826 1570 984 2325 126 86 20 chr20 34829217 34829622 -37324260 - MSTB1 LTR MaLR 0 432 1 936 265 141 28 chr20 34829622 34829675 -37324207 - L1MEc LINE L1 -5412 984 938 2015 242 60 24 chr20 34829809 34830388 -37323494 - L1MEc LINE L1 -5604 792 193 254 244 0 0 chr20 34830457 34830502 -37323380 - L1MEc LINE L1 -6314 82 38 345 308 135 19 chr20 34830507 34830663 -37323219 + MIR SINE MIR 46 219 -43 834 155 0 7 chr20 34830693 34830929 -37322953 + AluJb SINE Alu 2 305 -7 502 291 24 24 chr20 34831478 34831643 -37322239 - MIR3 SINE MIR -19 189 25 211 275 44 33 chr20 34831680 34831771 -37322111 + MIR SINE MIR 47 138 -124 766 263 37 71 chr20 34831861 34832158 -37321724 - MER102b DNA MER1_type -23 318 32 608 250 61 17 chr20 34833323 34833503 -37320379 + MIR SINE MIR 20 207 -55 1132 98 0 0 chr20 34833660 34833813 -37320069 + AluSg/x SINE Alu 142 294 -18 233 282 149 3 chr20 34833975 34834101 -37319781 - MIR SINE MIR -61 147 21 203 156 0 0 chr20 34834237 34834269 -37319613 + T-rich Low_complexity Low_complexity 4 35 0 401 230 11 11 chr20 34834355 34834442 -37319440 - MIR SINE MIR -30 232 146 366 288 34 51 chr20 34835504 34835681 -37318201 + MIR3 SINE MIR 33 206 -2 389 83 0 0 chr20 34835819 34835867 -37318015 - 5S rRNA rRNA -73 48 1 203 328 16 16 chr20 34837921 34837982 -37315900 - L2 LINE L2 -22 3250 3190 2230 84 0 3 chr20 34838317 34838614 -37315268 - AluY SINE Alu -15 296 1 221 304 116 18 chr20 34838663 34838775 -37315107 + MIR3 SINE MIR 11 133 -75 2126 90 0 20 chr20 34838877 34839176 -37314706 - AluSx SINE Alu -17 295 3 377 221 163 64 chr20 34839701 34839873 -37314009 + MIR SINE MIR 4 192 -70 1173 203 160 58 chr20 34840462 34840993 -37312889 - MER34C LTR ERV1 0 585 1 264 225 75 92 chr20 34841031 34841151 -37312731 + MIR3 SINE MIR 6 123 -85 379 305 8 0 chr20 34841329 34841447 -37312435 - L1ME LINE L1 -459 5662 5544 394 247 58 26 chr20 34842429 34842583 -37311299 - MIR3 SINE MIR -12 196 38 2382 103 6 3 chr20 34842872 34843183 -37310699 + AluSx SINE Alu 1 312 0 930 181 11 43 chr20 34843303 34843331 -37310551 + MER58A DNA MER1_type 37 64 -2356 1718 186 0 17 chr20 34843331 34843632 -37310250 - AluJo SINE Alu -16 296 1 930 181 11 43 chr20 34843632 34843791 -37310091 + MER58A DNA MER1_type 64 218 -6 275 224 136 56 chr20 34845296 34845421 -37308461 - L2 LINE L2 -1 3271 3137 840 161 52 104 chr20 34845971 34846201 -37307681 - MER20 DNA MER1_type 0 219 2 325 340 16 21 chr20 34848540 34848685 -37305197 + MIR3 SINE MIR 32 178 -30 2463 74 3 0 chr20 34848938 34849235 -37304647 - AluY SINE Alu -13 298 1 498 198 113 0 chr20 34849584 34849690 -37304192 - L2 LINE L2 -4 3309 3192 377 276 123 83 chr20 34849701 34849822 -37304060 - MLT1L LTR MaLR -89 526 411 1951 158 30 0 chr20 34849822 34850120 -37303762 - AluJo SINE Alu -5 307 1 377 276 123 83 chr20 34850120 34850502 -37303380 - MLT1L LTR MaLR -204 411 3 251 285 146 36 chr20 34850624 34850722 -37303160 - MER5A DNA MER1_type -5 184 98 2265 105 0 0 chr20 34850722 34851007 -37302875 + AluSx SINE Alu 7 291 -21 251 285 146 36 chr20 34851007 34851073 -37302809 - MER5A DNA MER1_type -91 98 2 196 206 0 29 chr20 34851685 34851753 -37302129 + GA-rich Low_complexity Low_complexity 3 68 0 1124 214 138 24 chr20 34851963 34852333 -37301549 - MLT1C LTR MaLR -50 417 6 193 196 125 0 chr20 34852522 34852578 -37301304 - L2 LINE L2 0 3272 3210 294 244 109 25 chr20 34852901 34853020 -37300862 - MIR3 SINE MIR -69 139 11 372 275 9 9 chr20 34853302 34853411 -37300471 - MIR SINE MIR -70 192 84 2424 73 3 17 chr20 34853851 34854153 -37299729 - AluSx SINE Alu -14 298 1 1176 169 11 0 chr20 34854168 34854352 -37299530 + AluJo SINE Alu 1 186 -126 180 0 0 0 chr20 34854748 34854768 -37299114 + (TG)n Simple_repeat Simple_repeat 1 20 0 238 309 9 18 chr20 34855253 34855363 -37298519 + GA-rich Low_complexity Low_complexity 4 112 0 219 321 88 15 chr20 34855477 34855614 -37298268 + L2 LINE L2 2933 3079 -193 30 0 0 0 chr20 34855912 34855942 -37297940 + AT_rich Low_complexity Low_complexity 1 30 0 306 291 29 29 chr20 34856968 34857071 -37296811 - L2 LINE L2 -202 3070 2968 439 189 0 0 chr20 34857099 34857173 -37296709 - MER47A DNA MER2_type 0 366 293 1063 170 17 100 chr20 34857177 34857418 -37296464 - AluJb SINE Alu -7 305 85 1678 146 14 7 chr20 34857418 34857712 -37296170 - MER47A DNA MER2_type -70 296 1 2407 116 0 0 chr20 34858519 34858830 -37295052 - AluSx SINE Alu -1 311 1 235 229 62 0 chr20 34858872 34858920 -37294962 + MIR3 SINE MIR 109 159 -49 404 252 40 46 chr20 34859164 34859315 -37294567 + Charlie8 DNA MER1_type 37 186 -2231 387 255 206 0 chr20 34859590 34859692 -37294190 - L2 LINE L2 0 3272 3150 222 277 170 53 chr20 34859783 34859877 -37294005 + MIR3 SINE MIR 90 194 -14 1562 162 4 32 chr20 34860077 34860355 -37293527 + AluJo SINE Alu 1 270 -42 2117 109 7 0 chr20 34861082 34861412 -37292470 + AluSg SINE Alu 5 336 0 1614 197 10 14 chr20 34861657 34861951 -37291931 + AluJo SINE Alu 1 293 -19 286 247 0 27 chr20 34861957 34862030 -37291852 - Charlie8 DNA MER1_type -2346 71 1 2462 82 3 3 chr20 34862772 34863076 -37290806 - AluSq SINE Alu -9 304 1 2293 71 0 7 chr20 34863076 34863357 -37290525 - AluSc SINE Alu -12 297 18 219 304 0 18 chr20 34863364 34863398 -37290484 - MIR SINE MIR -88 120 88 407 301 166 18 chr20 34863398 34863561 -37290321 + MIR SINE MIR 1 187 -75 1507 228 68 24 chr20 34863574 34863717 -37290165 + L1MC5 LINE L1 7339 7474 -487 1882 177 35 23 chr20 34863717 34864061 -37289821 - MER7A DNA MER2_type 0 346 1 1507 228 68 24 chr20 34864061 34864504 -37289378 + L1MC5 LINE L1 7474 7951 -10 1677 109 36 4 chr20 34864562 34864837 -37289045 + L1MC1 LINE L1 5696 5979 -354 449 253 97 0 chr20 34864840 34864994 -37288888 + MIR SINE MIR 94 262 0 2111 126 3 3 chr20 34865092 34865385 -37288497 - AluSc SINE Alu -16 293 1 297 272 53 59 chr20 34866556 34866675 -37287207 + L1ME LINE L1 5458 5577 -585 2844 13 0 0 chr20 34866675 34866979 -37286903 + AluYa5 SINE Alu 1 304 -7 297 272 53 59 chr20 34866979 34867028 -37286854 + L1ME LINE L1 5577 5625 -537 280 301 27 62 chr20 34867262 34867408 -37286474 - MIR SINE MIR -42 220 80 2379 80 0 3 chr20 34868547 34868846 -37285036 + AluY SINE Alu 1 298 -13 261 250 0 18 chr20 34869685 34869741 -37284141 - MIR3 SINE MIR -43 165 111 307 200 133 0 chr20 34870676 34870751 -37283131 - MIR3 SINE MIR -6 202 118 185 310 169 0 chr20 34870907 34870978 -37282904 + L2 LINE L2 3141 3223 -49 255 288 141 58 chr20 34871299 34871460 -37282422 + L2 LINE L2 2355 2501 -813 2276 110 23 10 chr20 34871460 34871768 -37282114 - AluSq SINE Alu 0 313 2 255 288 141 58 chr20 34871768 34871953 -37281929 + L2 LINE L2 2501 2730 -584 255 267 40 13 chr20 34872086 34872161 -37281721 + MIR SINE MIR 88 164 -98 290 273 28 142 chr20 34872191 34872444 -37281438 + L2 LINE L2 2935 3158 -114 209 208 62 0 chr20 34872578 34872626 -37281256 + L3 LINE CR1 1518 1568 -9 2098 117 3 3 chr20 34873198 34873489 -37280393 + AluSx SINE Alu 1 291 -21 1627 116 86 0 chr20 34873717 34873984 -37279898 + L1MB3 LINE L1 5887 6176 -7 741 275 42 29 chr20 34873995 34874235 -37279647 + MIR SINE MIR 20 262 0 295 153 255 20 chr20 34874247 34874345 -37279537 - MIR SINE MIR -50 212 93 185 340 50 64 chr20 34874385 34874526 -37279356 + MIR SINE MIR 59 197 -65 378 301 35 85 chr20 34874737 34874936 -37278946 + MIR3 SINE MIR 2 190 -18 429 217 210 13 chr20 34875620 34875777 -37278105 + MIR SINE MIR 65 252 -10 201 222 0 0 chr20 34876606 34876642 -37277240 + (CCG)n Simple_repeat Simple_repeat 2 37 0 207 235 0 20 chr20 34878052 34878103 -37275779 + L2 LINE L2 3019 3068 -245 1755 114 0 4 chr20 34878151 34878396 -37275486 - AluSx SINE Alu -13 299 56 413 204 23 53 chr20 34878477 34878609 -37275273 - LTR67 LTR ERVL -2 555 428 251 323 20 10 chr20 34878818 34878917 -37274965 - MLT1K LTR MaLR -340 248 149 2240 118 0 3 chr20 34879144 34879450 -37274432 + AluSx SINE Alu 1 305 -7 1830 151 13 13 chr20 34879507 34879805 -37274077 + AluJo SINE Alu 2 299 -13 552 214 60 0 chr20 34879937 34880054 -37273828 - Charlie8 DNA MER1_type -2257 160 37 476 214 159 8 chr20 34880140 34880266 -37273616 - MLT1H1 LTR MaLR -7 548 404 286 270 6 129 chr20 34880550 34880728 -37273154 - MIR3 SINE MIR -24 184 29 502 262 121 0 chr20 34880921 34881062 -37272820 + MIR SINE MIR 92 249 -13 188 33 0 33 chr20 34881241 34881271 -37272611 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 2029 153 3 13 chr20 34882357 34882670 -37271212 - AluJo SINE Alu -2 310 1 1820 163 3 10 chr20 34882831 34883125 -37270757 - AluJb SINE Alu -20 292 1 951 243 75 0 chr20 34883176 34883402 -37270480 + MIR SINE MIR 20 262 0 393 204 11 32 chr20 34883416 34883509 -37270373 + MLT1K LTR MaLR 108 198 -390 351 175 16 0 chr20 34883779 34883842 -37270040 + MLT1H1 LTR MaLR 20 83 -459 2819 168 8 31 chr20 34883860 34883965 -37269917 - MER66A LTR ERV1 0 478 372 2161 117 14 0 chr20 34883965 34884256 -37269626 - AluSc SINE Alu -14 295 1 2819 168 8 31 chr20 34884256 34884639 -37269243 - MER66A LTR ERV1 -106 372 1 566 218 231 46 chr20 34884721 34885024 -37268858 + MLT1H1 LTR MaLR 186 544 -11 361 206 113 0 chr20 34885085 34885182 -37268700 - MIR SINE MIR -93 169 62 274 248 88 58 chr20 34885274 34885411 -37268471 + MIR3 SINE MIR 6 146 -62 827 229 29 45 chr20 34885411 34885656 -37268226 - MER102b DNA MER1_type -2 339 99 380 262 8 66 chr20 34886514 34886636 -37267246 - L2 LINE L2 0 3313 3199 936 142 7 0 chr20 34886692 34886833 -37267049 - FRAM SINE Alu -2 174 33 1041 271 68 18 chr20 34887219 34887602 -37266280 + LTR16C LTR ERVL 90 491 0 2364 91 10 0 chr20 34887615 34887913 -37265969 - AluSq SINE Alu -12 301 1 924 230 50 74 chr20 34888160 34888564 -37265318 + MLT1K LTR MaLR 195 588 0 225 0 0 0 chr20 34888762 34888787 -37265095 + (CA)n Simple_repeat Simple_repeat 2 26 0 404 262 65 70 chr20 34889481 34889710 -37264172 + MLT1H LTR MaLR 80 307 -242 1662 199 98 7 chr20 34890131 34890538 -37263344 + LTR40c LTR ERVL 17 460 -5 2292 218 46 0 chr20 34891033 34891488 -37262394 - MLT1G LTR MaLR 0 590 115 207 0 0 0 chr20 34891491 34891514 -37262368 + (TTG)n Simple_repeat Simple_repeat 2 24 0 710 251 39 29 chr20 34891523 34891730 -37262152 - MIR SINE MIR -10 252 44 456 240 60 0 chr20 34891735 34891835 -37262047 - MLT1G LTR MaLR -460 130 25 1197 85 146 0 chr20 34891900 34892065 -37261817 - AluSx SINE Alu -123 189 1 723 240 60 10 chr20 34892328 34892528 -37261354 - L1MC5 LINE L1 -34 7927 7718 1616 169 135 22 chr20 34892627 34892983 -37260899 + MSTD LTR MaLR 1 396 0 1678 186 3 10 chr20 34893016 34893322 -37260560 - AluJo SINE Alu -8 304 1 61 73 0 0 chr20 34893406 34893530 -37260352 + AT_rich Low_complexity Low_complexity 1 124 0 247 299 38 83 chr20 34894056 34894451 -37259431 + L1M4 LINE L1 4167 4543 -1603 34 24 0 0 chr20 34894451 34894492 -37259390 + AT_rich Low_complexity Low_complexity 1 41 0 372 241 26 26 chr20 34894511 34894668 -37259214 - L1MC4 LINE L1 -1339 6983 1995 5193 113 17 66 chr20 34894672 34894938 -37258944 - Tigger3b DNA MER2_type -1798 1230 953 2090 100 4 0 chr20 34894938 34895219 -37258663 + AluSx SINE Alu 1 282 -30 5193 113 17 66 chr20 34895219 34895891 -37257991 - Tigger3b DNA MER2_type -2075 953 338 679 172 25 8 chr20 34895909 34896031 -37257851 + FLAM_C SINE Alu 2 125 -18 2464 68 3 0 chr20 34896043 34896353 -37257529 + AluSp SINE Alu 1 311 -2 424 345 49 20 chr20 34896378 34896624 -37257258 + L1M4 LINE L1 4695 4947 -1199 501 243 9 9 chr20 34896733 34896840 -37257042 - FLAM_A SINE Alu -28 114 8 2319 83 0 0 chr20 34896899 34897200 -37256682 + AluSx SINE Alu 1 301 -11 857 291 68 20 chr20 34897298 34897787 -37256095 + L1MDa LINE L1 3 6253 -1949 841 193 0 12 chr20 34897772 34897933 -37255949 + L1M4 LINE L1 3684 3842 -2304 * 2046 142 0 0 chr20 34897940 34898250 -37255632 - AluSx SINE Alu -2 310 1 959 162 17 12 chr20 34898250 34898423 -37255459 - MER3 DNA MER1_type -82 127 1 1184 197 22 4 chr20 34898496 34898724 -37255158 + MIR SINE MIR 31 262 0 618 266 13 16 chr20 34898719 34898902 -37254980 - MIR SINE MIR -63 145 18 * 2172 117 0 3 chr20 34899488 34899796 -37254086 - AluSp SINE Alu -6 307 1 469 265 72 72 chr20 34899890 34900343 -37253539 + MLT1L LTR MaLR 2 543 -72 700 248 97 13 chr20 34900672 34900898 -37252984 + Charlie8 DNA MER1_type 17 261 -2156 666 302 73 4 chr20 34901069 34901314 -37252568 - MIR SINE MIR 0 262 1 204 111 0 0 chr20 34901370 34901406 -37252476 + (GA)n Simple_repeat Simple_repeat 1 36 0 472 295 115 10 chr20 34901515 34901715 -37252167 - LTR67 LTR ERVL -6 551 331 180 0 0 0 chr20 34901917 34901937 -37251945 + (TTG)n Simple_repeat Simple_repeat 3 22 0 2120 110 0 16 chr20 34901975 34902307 -37251575 + AluSx SINE Alu 1 312 0 1901 133 0 11 chr20 34902309 34902587 -37251295 - AluSx SINE Alu -36 276 2 563 262 33 111 chr20 34902590 34902834 -37251048 - LTR67 LTR ERVL -332 225 1 938 174 0 0 chr20 34902937 34903098 -37250784 - AluJb SINE Alu -15 297 137 362 279 19 39 chr20 34903106 34903260 -37250622 - LTR33 LTR ERVL -76 445 295 849 280 10 10 chr20 34903296 34903503 -37250379 - LTR33 LTR ERVL -301 220 14 2138 113 6 6 chr20 34903896 34904207 -37249675 - AluSq SINE Alu -2 311 1 2306 114 0 0 chr20 34904643 34904960 -37248922 - LTR12 LTR ERV1 0 714 398 421 35 18 0 chr20 34904960 34905017 -37248865 - LTR12 LTR ERV1 -656 58 1 1438 249 43 12 chr20 34905921 34906288 -37247594 + LTR16A LTR ERVL 53 447 -3 * 2135 213 75 14 chr20 34906288 34906777 -37247105 + MLT1H LTR MaLR 31 549 0 1354 118 0 5 chr20 34907137 34907332 -37246550 + AluSx SINE Alu 1 194 -118 402 291 0 67 chr20 34908390 34908424 -37245458 + MIR SINE MIR 48 83 -179 1886 117 0 37 chr20 34908424 34908724 -37245158 - AluSx SINE Alu -23 289 1 402 291 0 67 chr20 34908724 34908854 -37245028 + MIR SINE MIR 83 201 -61 1870 133 0 7 chr20 34908939 34909252 -37244630 - AluSx SINE Alu 0 312 2 1779 139 0 20 chr20 34909256 34909604 -37244278 - AluSx SINE Alu 0 312 1 973 217 127 28 chr20 34910232 34910666 -37243216 - HAL1b LINE L1 -118 1230 754 455 172 32 0 chr20 34910699 34910792 -37243090 - L1MB7 LINE L1 -16 6168 6073 1953 120 20 3 chr20 34910792 34911091 -37242791 - AluSx SINE Alu -8 304 1 2514 46 0 3 chr20 34911102 34911406 -37242476 - AluY SINE Alu -7 304 2 1635 161 0 43 chr20 34911413 34911717 -37242165 - AluJb SINE Alu -20 292 2 2005 159 113 61 chr20 34911717 34912042 -37241840 - L1MB7 LINE L1 -395 5785 5478 2052 125 3 6 chr20 34912042 34912354 -37241528 - AluSx SINE Alu -1 311 1 2005 159 113 61 chr20 34912354 34912504 -37241378 - L1MB7 LINE L1 -702 5478 5337 1796 131 0 53 chr20 34912504 34912824 -37241058 + AluJo SINE Alu 1 303 -9 2005 159 113 61 chr20 34912824 34913003 -37240879 - L1MB7 LINE L1 -843 5337 5169 2329 93 0 0 chr20 34913003 34913313 -37240569 - AluSg SINE Alu 0 310 1 2005 159 113 61 chr20 34913313 34913500 -37240382 - L1MB7 LINE L1 -1011 5169 4868 2056 103 4 0 chr20 34913519 34913800 -37240082 - AluSx SINE Alu -22 290 9 586 148 30 0 chr20 34913917 34914018 -37239864 + MER33 DNA MER1_type 1 104 -220 804 138 0 16 chr20 34914018 34914141 -37239741 + FRAM SINE Alu 33 153 -23 238 122 49 0 chr20 34914141 34914182 -37239700 + MER33 DNA MER1_type 95 137 -187 674 104 74 74 chr20 34914335 34914415 -37239467 + MER33 DNA MER1_type 140 219 -2366 1586 171 38 0 chr20 34914415 34914581 -37239301 - AluJb SINE Alu -14 298 115 423 0 0 0 chr20 34914581 34914628 -37239254 + (TG)n Simple_repeat Simple_repeat 2 48 0 1586 171 38 0 chr20 34914628 34914748 -37239134 - AluJb SINE Alu -197 115 1 674 104 74 74 chr20 34914748 34914830 -37239052 + MER33 DNA MER1_type 218 302 -22 225 65 0 0 chr20 34916049 34916080 -37237802 + (TTTTA)n Simple_repeat Simple_repeat 3 33 0 2295 106 0 3 chr20 34916164 34916475 -37237407 + AluSx SINE Alu 1 310 -2 432 303 64 25 chr20 34917000 34917281 -37236601 - L1MEd LINE L1 -5738 381 90 1761 140 0 11 chr20 34917283 34917562 -37236320 + AluJo SINE Alu 1 276 -36 1787 154 11 0 chr20 34918111 34918396 -37235486 - AluJo SINE Alu -24 288 1 1994 103 146 70 chr20 34918465 34918694 -37235188 - MSTA LTR MaLR 0 428 218 2359 91 0 0 chr20 34918694 34919001 -37234881 - AluSc SINE Alu -1 308 2 1994 103 146 70 chr20 34919001 34919169 -37234713 - MSTA LTR MaLR -210 218 1 874 248 64 60 chr20 34919635 34919737 -37234145 - MIR SINE MIR 0 262 162 1443 170 0 93 chr20 34919737 34920061 -37233821 + AluJo SINE Alu 3 296 -16 874 248 64 60 chr20 34920061 34920208 -37233674 - MIR SINE MIR -100 162 12 897 147 0 0 chr20 34920238 34920367 -37233515 + FLAM_C SINE Alu 1 129 -4 1065 161 0 0 chr20 34920508 34920682 -37233200 - FRAM SINE Alu -3 173 1 255 341 40 52 chr20 34920825 34920998 -37232884 - MIR SINE MIR -70 192 22 883 244 122 36 chr20 34921659 34922144 -37231738 - MLT1G1 LTR MaLR 0 555 1 460 265 53 0 chr20 34922220 34922352 -37231530 + MER117 DNA MER1_type 57 195 -2 336 258 174 36 chr20 34922471 34922638 -37231244 - L2 LINE L2 0 3313 3124 1828 135 40 17 chr20 34923264 34923561 -37230321 + AluSx SINE Alu 1 304 -8 846 314 70 32 chr20 34923736 34924262 -37229620 - MLT1K LTR MaLR -18 570 25 2319 163 41 5 chr20 34924897 34925308 -37228574 + MSTB LTR MaLR 1 426 0 244 39 0 115 chr20 34925955 34926007 -37227875 + Alu SINE Alu 256 301 0 2063 136 3 0 chr20 34926059 34926367 -37227515 - AluSx SINE Alu -3 309 1 311 110 0 137 chr20 34926604 34926677 -37227205 - Zaphod DNA AcHobo -3968 63 1 232 170 0 64 chr20 34926703 34926750 -37227132 - L2 LINE L2 -8 3264 3221 1590 195 13 0 chr20 34927133 34927440 -37226442 + AluJo SINE Alu 1 311 -1 2227 113 0 0 chr20 34927542 34927852 -37226030 + AluSx SINE Alu 1 310 -2 813 112 0 0 chr20 34927852 34927968 -37225914 - AluJb SINE Alu -196 116 1 679 203 39 44 chr20 34927978 34928160 -37225722 - MLT1D LTR MaLR -323 182 2 1834 150 7 0 chr20 34928642 34928935 -37224947 + AluJb SINE Alu 1 295 -17 2015 110 4 0 chr20 34928941 34929245 -37224637 + AluSx SINE Alu 1 305 0 1121 121 5 45 chr20 34929249 34929448 -37224434 + AluSg/x SINE Alu 120 310 0 534 268 123 77 chr20 34929904 34930116 -37223766 - L2 LINE L2 -8 3305 3071 1502 171 31 11 chr20 34930116 34930403 -37223479 + AluJo SINE Alu 1 293 -19 534 268 123 77 chr20 34930403 34930515 -37223367 - L2 LINE L2 -242 3071 2966 1434 133 157 126 chr20 34930771 34931185 -37222697 - MSTA LTR MaLR -1 427 1 2259 104 0 0 chr20 34931439 34931747 -37222135 + AluSx SINE Alu 1 308 -4 490 226 44 0 chr20 34931796 34931931 -37221951 - L2 LINE L2 -345 2968 2828 383 167 271 10 chr20 34931931 34932027 -37221855 - MER5A DNA MER1_type -2 187 67 1018 130 49 0 chr20 34932027 34932189 -37221693 - FRAM SINE Alu -5 171 2 348 200 0 0 chr20 34932192 34932252 -37221630 - MER5A DNA MER1_type -119 70 11 568 262 9 61 chr20 34932263 34932371 -37221511 - L2 LINE L2 -515 2799 2706 2086 114 3 10 chr20 34932371 34932678 -37221204 + AluSq SINE Alu 1 305 -8 568 262 9 61 chr20 34932678 34932783 -37221099 - L2 LINE L2 -608 2706 2597 277 246 0 62 chr20 34932844 34932909 -37220973 - MER113 DNA MER1_type? -3 518 458 598 224 58 19 chr20 34932923 34933128 -37220754 - MER113 DNA MER1_type? -308 213 1 1940 117 3 55 chr20 34933149 34933474 -37220408 + AluSx SINE Alu 1 308 -4 21 36 0 0 chr20 34933493 34933521 -37220361 + AT_rich Low_complexity Low_complexity 1 28 0 459 219 75 41 chr20 34933799 34933945 -37219937 + MER5B DNA MER1_type 1 151 -27 351 246 55 120 chr20 34933984 34934167 -37219715 + MIR SINE MIR 21 191 -71 24 0 0 0 chr20 34934395 34934419 -37219463 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr20 34934586 34934616 -37219266 + AT_rich Low_complexity Low_complexity 1 30 0 417 345 39 4 chr20 34934620 34934849 -37219033 - L1ME3 LINE L1 -238 5924 5688 319 290 116 19 chr20 34935393 34935548 -37218334 + L2 LINE L2 3100 3269 -3 237 183 0 83 chr20 34935712 34935772 -37218110 - MLT1H LTR MaLR -1 548 494 3178 68 52 5 chr20 34935785 34935825 -37218057 - MLT2A1 LTR ERVL 0 444 407 240 35 0 0 chr20 34935825 34935854 -37218028 + (TA)n Simple_repeat Simple_repeat 2 30 0 3178 68 52 5 chr20 34935854 34936237 -37217645 - MLT2A1 LTR ERVL -37 407 1 207 100 0 0 chr20 34936243 34936273 -37217609 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 1874 110 35 0 chr20 34936273 34936555 -37217327 - AluSp SINE Alu -21 292 1 529 199 230 21 chr20 34936812 34937055 -37216827 - MLT1H LTR MaLR -228 321 18 1744 100 6 118 chr20 34937235 34937574 -37216308 + AluSx SINE Alu 1 301 -11 2172 103 3 3 chr20 34937928 34938228 -37215654 - AluSp SINE Alu -13 300 1 213 231 67 0 chr20 34938640 34938744 -37215138 + (CCCCAG)n Simple_repeat Simple_repeat 3 113 0 2197 101 7 0 chr20 34939134 34939442 -37214440 - AluSx SINE Alu 0 312 3 983 145 155 5 chr20 34939548 34939748 -37214134 + MER30 DNA MER1_type 1 230 0 1524 195 100 26 chr20 34940460 34940839 -37213043 - LTR16C LTR ERVL -7 484 78 486 133 8 172 chr20 34940949 34941077 -37212805 + MLT1C LTR MaLR 1 107 -283 1161 77 0 41 chr20 34941079 34941249 -37212633 + AluSq SINE Alu 133 295 -18 593 203 21 94 chr20 34941258 34941450 -37212432 + MLT1C LTR MaLR 96 273 -117 1164 156 145 50 chr20 34941450 34941590 -37212292 + AluJb SINE Alu 3 128 -184 2047 104 0 58 chr20 34941590 34941918 -37211964 + AluSx SINE Alu 2 310 -2 1164 156 145 50 chr20 34941918 34942059 -37211823 + AluJb SINE Alu 128 311 -1 699 205 8 0 chr20 34942066 34942193 -37211689 + MLT1C LTR MaLR 340 467 0 282 264 150 14 chr20 34942889 34943029 -37210853 + MIR3 SINE MIR 18 176 -32 2593 80 0 0 chr20 34943231 34943547 -37210335 - AluSx SINE Alu 0 316 1 1981 142 17 0 chr20 34943547 34943843 -37210039 - AluJo SINE Alu -11 301 1 733 299 140 35 chr20 34943843 34944328 -37209554 + MLT1K LTR MaLR 38 573 -15 227 268 0 0 chr20 34944363 34944419 -37209463 + GA-rich Low_complexity Low_complexity 3 58 0 260 218 0 26 chr20 34944909 34944987 -37208895 + CT-rich Low_complexity Low_complexity 4 79 0 1938 168 3 13 chr20 34944996 34945305 -37208577 - AluJo SINE Alu -6 306 1 578 258 137 63 chr20 34945395 34945822 -37208060 + MLT1J LTR MaLR 31 450 0 402 240 50 0 chr20 34946201 34946301 -37207581 - MER91C DNA MER1_type 0 140 36 1294 189 8 44 chr20 34946559 34946807 -37207075 + MER8 DNA MER2_type 1 239 0 3601 232 61 16 chr20 34946968 34947614 -37206268 + L2 LINE L2 1877 2579 -735 1081 154 0 18 chr20 34947614 34947783 -37206099 + FRAM SINE Alu 1 166 0 3601 232 61 16 chr20 34947783 34948067 -37205815 + L2 LINE L2 2579 2849 -465 270 136 0 0 chr20 34948151 34948195 -37205687 + (GGGGA)n Simple_repeat Simple_repeat 5 48 0 203 342 79 46 chr20 34948762 34948914 -37204968 - L2 LINE L2 -25 3247 3091 563 327 101 14 chr20 34948929 34949137 -37204745 + MIR SINE MIR 31 256 -6 195 42 0 0 chr20 34949143 34949167 -37204715 + (TGG)n Simple_repeat Simple_repeat 3 26 0 2231 97 7 0 chr20 34949181 34949470 -37204412 + AluSc SINE Alu 1 291 -18 1910 163 0 10 chr20 34949479 34949779 -37204103 + AluJb SINE Alu 1 297 -15 279 319 42 50 chr20 34949796 34950034 -37203848 - L2 LINE L2 -195 3077 2842 2195 104 0 43 chr20 34950154 34950480 -37203402 + AluSx SINE Alu 1 312 0 945 136 8 0 chr20 34950483 34950615 -37203267 + AluSq/x SINE Alu 1 133 -180 1579 141 119 69 chr20 34950634 34950955 -37202927 - L1MB2 LINE L1 -17 6154 5851 1825 161 3 7 chr20 34950955 34951241 -37202641 + AluJo SINE Alu 15 299 -13 1722 153 47 22 chr20 34951244 34951562 -37202320 + AluJb SINE Alu 1 325 0 1579 141 119 69 chr20 34951562 34951612 -37202270 - L1MB2 LINE L1 -321 5850 5759 239 316 119 12 chr20 34951664 34951832 -37202050 - L2 LINE L2 -627 2687 2502 568 70 0 70 chr20 34952003 34952089 -37201793 - MADE1 DNA Mariner 0 80 1 348 306 22 22 chr20 34952192 34952326 -37201556 + MIR SINE MIR 20 153 -55 195 129 0 0 chr20 34952347 34952378 -37201504 + (ATGGTG)n Simple_repeat Simple_repeat 1 31 0 853 200 100 38 chr20 34952379 34952589 -37201293 - MIR SINE MIR -8 254 32 307 239 28 0 chr20 34952597 34952668 -37201214 + MER5B DNA MER1_type 28 100 -78 1231 196 0 9 chr20 34953008 34953237 -37200645 - MSTC LTR MaLR 0 428 202 848 150 0 50 chr20 34953237 34953377 -37200505 - FLAM_C SINE Alu -6 137 5 1561 85 0 0 chr20 34953381 34953593 -37200289 - MSTC LTR MaLR -216 212 1 1233 229 61 13 chr20 34953874 34954210 -37199672 + L1ME3 LINE L1 5805 6154 -8 196 284 12 12 chr20 34954797 34954878 -37199004 - MIR SINE MIR -91 117 37 724 238 19 6 chr20 34955680 34955840 -37198042 - L2 LINE L2 -1 3312 3151 1549 205 46 116 chr20 34955844 34956379 -37197503 + L1ME3 LINE L1 5600 6096 -66 2042 135 7 10 chr20 34956379 34956675 -37197207 + AluSx SINE Alu 1 295 -17 1549 205 46 116 chr20 34956675 34956699 -37197183 + L1ME3 LINE L1 6096 6120 -42 533 301 158 30 chr20 34956703 34957197 -37196685 - L2 LINE L2 -101 3212 2635 2244 105 34 0 chr20 34957568 34957864 -37196018 + AluSx SINE Alu 1 306 -6 2482 78 0 13 chr20 34958956 34959263 -37194619 + AluSx SINE Alu 1 303 -9 2211 133 0 16 chr20 34959865 34960180 -37193702 + AluSx SINE Alu 1 310 -2 1149 252 43 0 chr20 34960239 34960564 -37193318 + L1ME1 LINE L1 5480 5818 -348 525 262 135 42 chr20 34960679 34961057 -37192825 - MER65A LTR ERV1 -32 413 1 1015 223 90 7 chr20 34961070 34961348 -37192534 + L1ME1 LINE L1 5829 6129 -37 1605 150 66 22 chr20 34961364 34961638 -37192244 + AluJo SINE Alu 12 297 -15 30 27 0 0 chr20 34961663 34961700 -37192182 + AT_rich Low_complexity Low_complexity 1 37 0 747 268 66 7 chr20 34961888 34962160 -37191722 - LTR16A1 LTR ERVL -17 440 153 2282 129 0 0 chr20 34963219 34963530 -37190352 + AluSx SINE Alu 1 311 -1 2032 160 0 25 chr20 34963836 34964154 -37189728 - AluJo SINE Alu 0 312 3 2266 114 3 0 chr20 34964355 34964661 -37189221 + AluSx SINE Alu 1 307 -5 518 264 57 7 chr20 34964840 34964980 -37188902 + MIR SINE MIR 37 183 -79 234 346 37 9 chr20 34965022 34965129 -37188753 + L3 LINE CR1 1067 1176 -401 713 268 101 66 chr20 34965176 34965319 -37188563 + L1ME4a LINE L1 4957 5094 -1027 1974 159 3 7 chr20 34965319 34965628 -37188254 + AluJb SINE Alu 1 308 -4 713 268 101 66 chr20 34965628 34965879 -37188003 + L1ME4a LINE L1 5094 5335 -786 2883 10 0 0 chr20 34965879 34966186 -37187696 - AluYb8 SINE Alu -11 307 1 713 268 101 66 chr20 34966186 34966338 -37187544 + L1ME4a LINE L1 5335 5524 -597 2441 86 0 3 chr20 34966338 34966639 -37187243 - AluY SINE Alu -11 300 1 713 268 101 66 chr20 34966639 34966673 -37187209 + L1ME4a LINE L1 5524 5555 -566 1379 204 91 4 chr20 34966690 34966955 -37186927 + AluJb SINE Alu 1 288 -24 41 21 0 0 chr20 34966955 34967003 -37186879 + AT_rich Low_complexity Low_complexity 1 48 0 573 294 42 42 chr20 34967311 34967641 -37186241 + L1ME4a LINE L1 5596 5925 -196 434 211 65 8 chr20 34967667 34967790 -37186092 + L1ME4a LINE L1 5992 6121 0 2312 120 7 0 chr20 34967839 34968147 -37185735 + AluSx SINE Alu 1 310 -2 201 74 0 0 chr20 34968155 34968182 -37185700 + (GGAA)n Simple_repeat Simple_repeat 2 28 0 381 350 31 23 chr20 34968243 34968503 -37185379 + L3 LINE CR1 1273 1534 -43 2400 106 0 0 chr20 34968635 34968938 -37184944 + AluSg SINE Alu 1 303 -7 1610 165 73 0 chr20 34968950 34969222 -37184660 + AluJb SINE Alu 1 292 -20 3314 198 66 25 chr20 34969245 34970013 -37183869 - MER21B LTR ERV1 -15 848 49 284 208 10 129 chr20 34970114 34970195 -37183687 - MER21B LTR ERV1 -774 89 21 1860 116 0 8 chr20 34970195 34970446 -37183436 - AluJb SINE Alu -46 266 18 284 208 10 129 chr20 34970446 34970465 -37183417 - MER21B LTR ERV1 -842 21 1 180 0 0 0 chr20 34970527 34970547 -37183335 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 2222 104 0 0 chr20 34970551 34970838 -37183044 - AluSx SINE Alu -25 287 1 269 215 195 14 chr20 34971029 34971174 -37182708 - MIR SINE MIR -48 214 35 1546 180 58 0 chr20 34971381 34971659 -37182223 + AluJo SINE Alu 1 294 -18 2405 87 3 0 chr20 34971659 34971957 -37181925 + AluSc SINE Alu 1 299 -10 311 173 53 27 chr20 34971961 34972036 -37181846 - MIR SINE MIR -93 169 93 756 209 17 6 chr20 34972170 34972347 -37181535 - MER104 DNA MER2_type 0 180 2 2311 110 0 7 chr20 34972347 34972655 -37181227 + AluSx SINE Alu 1 306 -6 405 346 23 0 chr20 34972671 34972801 -37181081 - MIR SINE MIR -114 148 16 297 240 0 13 chr20 34972838 34972913 -37180969 - MER91B DNA MER1_type -115 75 2 2158 103 0 40 chr20 34973125 34973427 -37180455 + AluSc SINE Alu 3 292 -17 1551 258 20 18 chr20 34973509 34973913 -37179969 - LTR16A LTR ERVL 0 450 43 1572 189 13 91 chr20 34973913 34974309 -37179573 - MLT1A1 LTR MaLR 0 365 1 1551 258 20 18 chr20 34974309 34974353 -37179529 - LTR16A LTR ERVL -407 43 1 401 329 7 28 chr20 34974371 34974514 -37179368 + MIR SINE MIR 14 153 -109 422 289 47 20 chr20 34974738 34974887 -37178995 - L2 LINE L2 -517 2797 2645 2218 87 0 4 chr20 34974887 34975164 -37178718 + AluSc SINE Alu 31 306 -3 384 291 154 4 chr20 34975536 34975763 -37178119 - MLT1L LTR MaLR -8 607 347 348 304 36 14 chr20 34975831 34975969 -37177913 - MLT1L LTR MaLR -355 260 120 331 274 97 0 chr20 34976108 34976221 -37177661 + LTR16A LTR ERVL 327 450 0 559 201 123 0 chr20 34976226 34976380 -37177502 - MER117 DNA MER1_type -9 188 16 535 275 109 0 chr20 34976986 34977124 -37176758 - MLT1G LTR MaLR -322 268 116 371 204 32 11 chr20 34977153 34977246 -37176636 + L1MCc LINE L1 7 101 -6322 1818 150 3 27 chr20 34977258 34977577 -37176305 - AluJb SINE Alu 0 312 1 1183 203 122 3 chr20 34977578 34977898 -37175984 - L1MCc LINE L1 -5029 1394 1037 667 183 0 0 chr20 34977938 34978042 -37175840 - FLAM_A SINE Alu -38 104 1 508 202 22 137 chr20 34978043 34978226 -37175656 - L1MCc LINE L1 -5427 996 835 555 325 21 4 chr20 34978331 34978565 -37175317 - L1MCc LINE L1 -5917 506 269 519 238 16 0 chr20 34978594 34978893 -37174989 + AluSp/q SINE Alu 188 313 0 589 134 18 9 chr20 34978893 34979005 -37174877 + GA-rich Low_complexity Low_complexity 1 113 0 892 227 0 12 chr20 34979005 34979247 -37174635 + L1MCc LINE L1 1370 1608 -5333 1373 190 40 25 chr20 34979281 34979555 -37174327 + AluJo SINE Alu 19 296 -16 2787 264 25 35 chr20 34979558 34979891 -37173991 + L1MCc LINE L1 1798 2133 -4989 195 42 0 0 chr20 34979891 34979915 -37173967 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2787 264 25 35 chr20 34979915 34980594 -37173288 + L1MCc LINE L1 2133 2800 -4322 218 250 208 83 chr20 34980605 34980725 -37173157 - L2 LINE L2 -2 3270 3136 1284 221 49 49 chr20 34982058 34982448 -37171434 + MLT1C LTR MaLR 59 448 -19 995 217 90 37 chr20 34982547 34982791 -37171091 - MIR SINE MIR 0 262 6 1933 112 0 4 chr20 34982855 34983113 -37170769 + AluSx SINE Alu 35 291 -21 486 33 0 0 chr20 34983157 34983217 -37170665 + (TA)n Simple_repeat Simple_repeat 1 60 0 387 0 0 0 chr20 34983216 34983259 -37170623 + (GA)n Simple_repeat Simple_repeat 2 44 0 * 605 227 8 0 chr20 34983259 34983378 -37170504 - AluJb SINE Alu -34 278 159 189 192 77 19 chr20 34983381 34983433 -37170449 + MIR SINE MIR 117 171 -91 522 197 110 8 chr20 34983921 34984048 -37169834 - L2 LINE L2 -2 3311 3172 1683 144 51 81 chr20 34984093 34984142 -37169740 - MLT1B LTR MaLR -6 384 335 3546 120 15 28 chr20 34984142 34984346 -37169536 - MER1A DNA MER1_type -2173 527 322 2417 87 0 0 chr20 34984346 34984644 -37169238 - AluSg SINE Alu -12 298 1 3546 120 15 28 chr20 34984644 34984973 -37168909 - MER1A DNA MER1_type -2378 322 1 1683 144 51 81 chr20 34984973 34985152 -37168730 - MLT1B LTR MaLR -55 335 167 2239 96 0 20 chr20 34985152 34985478 -37168404 + AluSg SINE Alu 1 320 0 1683 144 51 81 chr20 34985478 34985640 -37168242 - MLT1B LTR MaLR -223 167 2 677 135 63 0 chr20 34985659 34985770 -37168112 - FLAM_C SINE Alu -10 133 16 652 220 165 6 chr20 34985776 34986027 -37167855 - L2 LINE L2 -243 3070 2770 202 308 26 26 chr20 34986302 34986380 -37167502 - L2 LINE L2 -287 2985 2908 349 282 39 53 chr20 34986474 34986680 -37167202 + L1MC4a LINE L1 5806 6008 -1800 2019 138 20 3 chr20 34986758 34987054 -37166828 - AluSx SINE Alu -5 307 7 2161 168 128 2 chr20 34987174 34987597 -37166285 + LTR69 LTR ERVL 3 478 -110 680 191 9 0 chr20 34987598 34987713 -37166169 + FLAM_C SINE Alu 2 117 -26 681 154 77 0 chr20 34987728 34987845 -37166037 + LTR69 LTR ERVL 463 588 0 211 274 59 0 chr20 34988537 34988588 -37165294 + MIR SINE MIR 93 146 -62 1878 159 3 37 chr20 34988765 34988903 -37164979 + AluJo SINE Alu 1 142 -170 2336 95 10 0 chr20 34988903 34989197 -37164685 + AluSp SINE Alu 3 299 -14 1878 159 3 37 chr20 34989197 34989379 -37164503 + AluJo SINE Alu 142 310 -2 312 346 91 34 chr20 34989538 34989746 -37164136 + L1MEd LINE L1 243 462 -5657 1410 199 35 49 chr20 34989821 34990167 -37163715 - MLT1B LTR MaLR -2 388 48 412 262 77 73 chr20 34990191 34990379 -37163503 + L1MEd LINE L1 1032 1218 -1272 1716 109 80 4 chr20 34990379 34990658 -37163224 + AluSx SINE Alu 30 326 0 412 262 77 73 chr20 34990658 34990738 -37163144 + L1MEd LINE L1 1218 1296 -1194 1989 174 0 0 chr20 34990738 34991042 -37162840 + AluJo SINE Alu 1 304 -8 412 262 77 73 chr20 34991042 34991300 -37162582 + L1MEd LINE L1 1296 1552 -938 1961 138 57 0 chr20 34991300 34991582 -37162300 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr20 34991582 34991602 -37162280 + (TA)n Simple_repeat Simple_repeat 2 21 0 412 262 77 73 chr20 34991602 34991668 -37162214 + L1MEd LINE L1 1551 1693 -797 293 312 40 40 chr20 34991669 34991868 -37162014 + MLT1K LTR MaLR 389 587 -1 228 35 0 0 chr20 34992132 34992161 -37161721 + (CCA)n Simple_repeat Simple_repeat 1 29 0 369 0 0 0 chr20 34992162 34992203 -37161679 + (CA)n Simple_repeat Simple_repeat 1 41 0 1945 159 0 25 chr20 34992612 34992926 -37160956 - AluJb SINE Alu -6 306 1 926 162 7 19 chr20 34992945 34993099 -37160783 + FRAM SINE Alu 1 146 -30 2397 68 3 3 chr20 34993101 34993396 -37160486 - AluY SINE Alu -16 295 1 2304 67 0 42 chr20 34994080 34994393 -37159489 + AluY SINE Alu 1 300 -11 1834 161 52 25 chr20 34994548 34994914 -37158968 - MLT2C1 LTR ERVL 0 397 22 1814 155 7 24 chr20 34995415 34995592 -37158290 - AluJo SINE Alu -20 292 120 2076 145 0 7 chr20 34995592 34995895 -37157987 + AluJb SINE Alu 1 301 -11 1814 155 7 24 chr20 34995895 34996013 -37157869 - AluJo SINE Alu -192 120 2 312 173 202 39 chr20 34996116 34996220 -37157662 - MIR3 SINE MIR -51 157 37 188 230 0 6 chr20 34996971 34997039 -37156843 + MIR SINE MIR 29 143 -119 520 279 55 12 chr20 34997119 34997284 -37156598 + MIR SINE MIR 20 191 -71 2534 65 3 0 chr20 34997628 34997937 -37155945 - AluY SINE Alu -1 310 1 30 0 0 0 chr20 34997985 34998015 -37155867 + AT_rich Low_complexity Low_complexity 1 30 0 346 309 154 46 chr20 34998701 34998960 -37154922 - L2 LINE L2 -60 3212 2926 379 227 57 0 chr20 34999333 34999421 -37154461 - L2 LINE L2 -13 3300 3208 2316 109 0 0 chr20 34999739 35000041 -37153841 - AluSx SINE Alu -10 302 1 2066 113 19 45 chr20 35000561 35000872 -37153010 + AluSx SINE Alu 1 303 -9 267 319 32 0 chr20 35000962 35001056 -37152826 + L1ME LINE L1 5684 5780 -341 420 327 0 0 chr20 35001056 35001157 -37152725 + L2 LINE L2 3167 3267 -5 265 293 132 0 chr20 35001864 35001970 -37151912 - MIR SINE MIR -11 251 132 267 255 117 48 chr20 35001982 35002170 -37151712 - L2 LINE L2 -255 3017 2817 205 328 130 34 chr20 35002147 35002470 -37151412 - L2 LINE L2 -645 2669 2316 * 652 281 130 23 chr20 35002638 35003029 -37150853 + Charlie8 DNA MER1_type 39 471 -1946 202 268 0 0 chr20 35003311 35003352 -37150530 + (CACG)n Simple_repeat Simple_repeat 3 43 0 861 213 104 32 chr20 35004091 35004497 -37149385 + MLT1D LTR MaLR 22 467 0 206 214 14 43 chr20 35005020 35005090 -37148792 - MIR SINE MIR -172 90 23 620 241 29 17 chr20 35005262 35005436 -37148446 + MIR SINE MIR 80 255 -7 234 260 153 77 chr20 35006095 35006434 -37147448 - L2 LINE L2 -372 2942 2578 1050 182 11 0 chr20 35006435 35006611 -37147271 + MER45A DNA AcHobo 1 178 0 441 202 36 0 chr20 35006776 35006860 -37147022 - MER63 DNA MER1_type -306 756 44 2493 41 0 44 chr20 35008034 35008354 -37145528 + AluY SINE Alu 1 306 -5 336 188 107 40 chr20 35008393 35008542 -37145340 + Charlie7 DNA MER1_type 2425 2583 -29 1594 252 51 46 chr20 35008604 35009149 -37144733 + MLT1G LTR MaLR 3 532 -58 2134 128 0 0 chr20 35009149 35009468 -37144414 + AluSx SINE Alu 2 320 0 1594 252 51 46 chr20 35009468 35009528 -37144354 + MLT1G LTR MaLR 532 590 0 775 169 0 0 chr20 35009691 35009821 -37144061 - AluJb SINE Alu 0 312 183 280 311 22 11 chr20 35010049 35010139 -37143743 + MER5B DNA MER1_type 87 177 -1 234 287 111 19 chr20 35010190 35010298 -37143584 + MIR3 SINE MIR 89 206 -2 226 133 0 167 chr20 35010822 35010882 -37143000 - MIR SINE MIR -78 130 81 319 346 168 13 chr20 35011351 35011649 -37142233 - L2 LINE L2 -6 3266 2923 2201 109 0 13 chr20 35012596 35012898 -37140984 + AluSx SINE Alu 1 298 -14 321 195 49 138 chr20 35013126 35013249 -37140633 - L2 LINE L2 -19 3253 3142 2716 17 0 0 chr20 35013335 35013625 -37140257 + AluYa5 SINE Alu 1 290 -21 844 191 143 5 chr20 35014144 35014333 -37139549 + MER58A DNA MER1_type 6 220 -4 2352 100 0 22 chr20 35014499 35014818 -37139064 - AluSx SINE Alu 0 312 1 2145 171 36 13 chr20 35014828 35015214 -37138668 - MSTD LTR MaLR -1 395 1 273 192 39 0 chr20 35015247 35015299 -37138583 + MIR SINE MIR 55 108 -154 56 55 0 0 chr20 35015390 35015481 -37138401 + AT_rich Low_complexity Low_complexity 1 91 0 841 172 109 142 chr20 35015481 35015784 -37138098 - AluJo SINE Alu -9 293 1 303 352 0 9 chr20 35016236 35016344 -37137538 + MIR3 SINE MIR 15 121 -87 305 244 78 43 chr20 35016696 35016811 -37137071 - MIR SINE MIR -35 227 109 186 286 41 0 chr20 35016929 35016978 -37136904 - MIR SINE MIR -113 95 45 184 274 48 36 chr20 35017279 35017363 -37136519 - MIR3 SINE MIR -114 94 10 836 57 0 28 chr20 35017474 35017580 -37136302 + AluSq/x SINE Alu 1 103 -209 329 252 87 31 chr20 35017581 35017708 -37136174 + MIR3 SINE MIR 10 143 -65 1974 129 17 17 chr20 35018865 35019159 -37134723 - AluSx SINE Alu -18 294 1 25 0 0 0 chr20 35019236 35019261 -37134621 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr20 35019455 35019477 -37134405 + (T)n Simple_repeat Simple_repeat 1 22 0 1976 40 0 32 chr20 35019930 35020223 -37133659 - AluY SINE Alu 0 327 43 202 284 12 25 chr20 35020255 35020336 -37133546 + CT-rich Low_complexity Low_complexity 1 80 0 586 211 110 72 chr20 35020769 35020978 -37132904 + MIR SINE MIR 19 235 -27 219 194 0 0 chr20 35021456 35021492 -37132390 - MIR SINE MIR -115 147 112 2203 122 20 0 chr20 35021565 35021860 -37132022 + AluSx SINE Alu 1 301 -11 2353 47 0 7 chr20 35022015 35022290 -37131592 + AluY SINE Alu 38 310 -1 1757 149 4 4 chr20 35022747 35023015 -37130867 + AluSx SINE Alu 37 304 -8 407 19 0 19 chr20 35023015 35023068 -37130814 + (GGGA)n Simple_repeat Simple_repeat 2 53 0 955 229 70 9 chr20 35023731 35023945 -37129937 + MIR SINE MIR 5 231 -31 209 320 107 16 chr20 35023993 35024115 -37129767 - MIR3 SINE MIR -29 179 47 440 229 41 41 chr20 35024144 35024266 -37129616 + MIR SINE MIR 21 142 -66 708 292 64 15 chr20 35024299 35024566 -37129316 + L2 LINE L2 2846 3125 -188 346 280 77 42 chr20 35024575 35024611 -37129271 + L2 LINE L2 3077 3110 -203 2142 89 3 53 chr20 35024611 35024915 -37128967 - AluSq SINE Alu -23 290 2 346 280 77 42 chr20 35024915 35025021 -37128861 + L2 LINE L2 3110 3224 -89 2372 79 3 3 chr20 35025526 35025818 -37128064 - AluSp SINE Alu -21 292 1 760 143 7 71 chr20 35026074 35026214 -37127668 - FLAM_A SINE Alu 0 133 3 447 286 16 16 chr20 35026222 35026348 -37127534 - MIR SINE MIR -117 145 20 2066 168 62 29 chr20 35026899 35027317 -37126565 - MSTB1 LTR MaLR 0 432 1 2689 58 0 3 chr20 35028426 35028738 -37125144 + AluY SINE Alu 1 311 0 342 316 168 21 chr20 35028882 35029072 -37124810 - MIR SINE MIR -13 249 32 867 214 244 33 chr20 35029220 35029702 -37124180 - L2 LINE L2 0 3313 2695 486 263 0 34 chr20 35029708 35029826 -37124056 - L1M4 LINE L1 -1989 4157 4044 1799 203 135 19 chr20 35029829 35030577 -37123305 - L1M4 LINE L1 -2155 3991 3069 188 269 101 54 chr20 35031143 35031292 -37122590 + MIR SINE MIR 105 260 -2 372 274 154 0 chr20 35032264 35032381 -37121501 + MIR SINE MIR 45 179 -83 243 269 101 81 chr20 35032481 35032630 -37121252 + MIR3 SINE MIR 35 186 -22 336 275 110 71 chr20 35032877 35033059 -37120823 + MIR3 SINE MIR 7 195 -13 2339 86 0 3 chr20 35033386 35033678 -37120204 + AluSc SINE Alu 1 291 -18 241 182 23 0 chr20 35033730 35033774 -37120108 - MIR SINE MIR -77 131 87 557 307 104 0 chr20 35034194 35034396 -37119486 - MIR SINE MIR -6 256 34 254 180 0 66 chr20 35035269 35035330 -37118552 - MIR3 SINE MIR -1 207 151 1979 131 3 47 chr20 35035378 35035699 -37118183 + AluSx SINE Alu 1 307 -5 340 286 24 0 chr20 35035860 35035944 -37117938 - MIR SINE MIR -55 153 68 403 234 156 81 chr20 35036162 35036533 -37117349 - LTR37B LTR ERV1 -69 399 1 400 325 68 34 chr20 35037487 35037794 -37116088 - L2 LINE L2 -192 3080 2769 1919 111 29 62 chr20 35037883 35038190 -37115692 - AluSp SINE Alu -15 298 2 565 271 319 26 chr20 35038374 35038466 -37115416 - L2 LINE L2 -3 3310 3246 1883 145 20 26 chr20 35038466 35038769 -37115113 - AluJo SINE Alu -10 302 2 565 271 319 26 chr20 35038769 35039080 -37114802 - L2 LINE L2 -67 3246 2788 213 292 21 62 chr20 35039090 35039186 -37114696 - MIR SINE MIR -96 112 21 291 336 129 0 chr20 35039317 35039433 -37114449 - MIR3 SINE MIR -14 194 64 439 328 42 21 chr20 35039811 35040003 -37113879 + MIR SINE MIR 8 203 -59 244 193 0 0 chr20 35040167 35040224 -37113658 + L1MD2 LINE L1 6302 6358 -1 322 279 8 47 chr20 35040263 35040369 -37113513 + MIR3 SINE MIR 14 116 -92 2373 102 3 0 chr20 35040369 35040674 -37113208 - AluSp SINE Alu -7 306 1 322 279 8 47 chr20 35040674 35040696 -37113186 + MIR3 SINE MIR 116 137 -71 367 266 81 53 chr20 35041119 35041350 -37112532 + MIR SINE MIR 1 234 -28 418 285 103 56 chr20 35041935 35042130 -37111752 - MIR3 SINE MIR -30 178 17 2592 47 7 0 chr20 35042130 35042427 -37111455 + AluY SINE Alu 1 299 -12 199 247 99 49 chr20 35042468 35042549 -37111333 - L2 LINE L2 0 3313 3229 209 295 42 42 chr20 35042825 35042920 -37110962 + MIR SINE MIR 21 115 -93 * 246 347 99 16 chr20 35042894 35043015 -37110867 - L2 LINE L2 -6 3266 3136 187 231 138 46 chr20 35043073 35043138 -37110744 + MIR SINE MIR 79 149 -113 431 230 172 35 chr20 35043219 35043393 -37110489 - MIR SINE MIR -46 216 19 293 232 219 52 chr20 35043660 35043815 -37110067 - MIR SINE MIR -65 197 17 384 291 24 61 chr20 35044706 35044871 -37109011 - MIR SINE MIR -56 206 48 * 789 242 25 11 chr20 35044845 35045093 -37108789 + MIR SINE MIR 9 255 -7 2105 82 0 33 chr20 35045154 35045460 -37108422 - AluY SINE Alu -15 296 1 223 179 0 0 chr20 35045603 35045642 -37108240 - MIR3 SINE MIR -9 199 161 220 290 200 10 chr20 35045909 35046009 -37107873 - MIR3 SINE MIR -52 156 38 830 84 0 0 chr20 35046608 35046715 -37107167 - AluSq/x SINE Alu -205 107 1 260 315 17 19 chr20 35046774 35046890 -37106992 - MIR SINE MIR -72 136 63 184 243 14 114 chr20 35046893 35046941 -37106941 + L2 LINE L2 3246 3287 -26 1890 174 3 0 chr20 35046941 35047252 -37106630 - AluJo SINE Alu 0 312 1 184 243 14 114 chr20 35047252 35047273 -37106609 + L2 LINE L2 3286 3308 -5 293 330 43 77 chr20 35047804 35048013 -37105869 - L2 LINE L2 -40 3232 3031 1970 133 33 0 chr20 35048099 35048401 -37105481 + AluSx SINE Alu 1 312 0 932 203 11 22 chr20 35048554 35048736 -37105146 - MIR SINE MIR -65 197 18 315 316 39 52 chr20 35049050 35049205 -37104677 - L2 LINE L2 -8 3264 3112 286 324 70 87 chr20 35049666 35050138 -37103744 + L2 LINE L2 2809 3272 0 184 281 30 126 chr20 35050112 35050247 -37103635 + L2 LINE L2 2690 2811 -503 * 730 233 136 80 chr20 35050325 35050851 -37103031 + L1ME4a LINE L1 5481 6038 -83 2529 46 0 0 chr20 35050941 35051244 -37102638 + AluY SINE Alu 1 303 -8 365 250 37 9 chr20 35051427 35051535 -37102347 - MIR SINE MIR -132 130 20 314 218 51 0 chr20 35052228 35052306 -37101576 - MIR SINE MIR -132 130 49 311 300 33 0 chr20 35052384 35052474 -37101408 - L2 LINE L2 -502 2812 2720 528 223 101 7 chr20 35053031 35053179 -37100703 - MIR SINE MIR -60 202 41 1050 134 168 5 chr20 35053811 35054013 -37099869 + MER46A DNA MER2_type 2 236 0 387 237 102 8 chr20 35054023 35054141 -37099741 - MIR SINE MIR -6 256 128 325 130 14 43 chr20 35055052 35055121 -37098761 + MER5C DNA MER1_type 258 324 0 188 268 37 37 chr20 35055173 35055255 -37098627 + MIR SINE MIR 143 224 -38 * 209 275 154 0 chr20 35055219 35055310 -37098572 - MIR SINE MIR -1 261 157 247 261 45 11 chr20 35055477 35055565 -37098317 + MIR SINE MIR 45 135 -73 193 161 179 54 chr20 35055631 35055687 -37098195 + L2 LINE L2 3173 3235 -37 251 225 141 42 chr20 35055696 35055767 -37098115 + L2 LINE L2 3173 3250 -22 186 307 139 30 chr20 35056633 35056734 -37097148 + MIR SINE MIR 58 169 -93 514 296 76 31 chr20 35056911 35057134 -37096748 + MIR SINE MIR 2 234 -28 432 332 75 5 chr20 35058328 35058542 -37095340 - MIR SINE MIR -14 248 20 305 203 27 27 chr20 35058651 35058725 -37095157 + L2 LINE L2 3198 3271 -1 406 325 62 36 chr20 35058798 35058992 -37094890 - MIR SINE MIR -51 211 13 255 221 24 134 chr20 35059636 35059763 -37094119 + MIR SINE MIR 37 149 -59 1765 108 40 0 chr20 35059766 35060017 -37093865 + AluSq SINE Alu 5 265 -48 429 242 11 11 chr20 35060019 35060114 -37093768 - MLT1A1 LTR MaLR -125 240 146 734 158 0 0 chr20 35060115 35060235 -37093647 - FLAM_C SINE Alu -12 131 12 662 184 63 38 chr20 35060245 35060403 -37093479 - MLT1A1 LTR MaLR -200 165 4 311 239 217 29 chr20 35060594 35060732 -37093150 + MIR SINE MIR 51 214 -48 1618 114 121 15 chr20 35060748 35061021 -37092861 - AluSx SINE Alu -10 302 1 228 67 0 0 chr20 35061358 35061388 -37092494 + (T)n Simple_repeat Simple_repeat 1 30 0 268 319 78 17 chr20 35061460 35061576 -37092306 + MIR3 SINE MIR 15 137 -71 938 263 156 17 chr20 35062109 35062410 -37091472 - MER115 DNA AcHobo 0 693 351 184 304 59 20 chr20 35062652 35062754 -37091128 - L3 LINE CR1 -388 1189 1084 27 0 0 0 chr20 35064089 35064116 -37089766 + AT_rich Low_complexity Low_complexity 1 27 0 2312 118 100 10 chr20 35064367 35064756 -37089126 - MSTA LTR MaLR 0 428 5 2108 84 40 3 chr20 35064836 35065133 -37088749 - AluSx SINE Alu -4 308 1 248 278 216 14 chr20 35065284 35065431 -37088451 + MIR SINE MIR 37 214 -48 279 0 0 0 chr20 35066485 35066516 -37087366 + (TG)n Simple_repeat Simple_repeat 1 31 0 216 317 0 0 chr20 35066553 35066613 -37087269 - L2 LINE L2 0 3313 3254 364 301 123 24 chr20 35067448 35067630 -37086252 - MIR3 SINE MIR -12 196 1 585 270 124 11 chr20 35068137 35068322 -37085560 + MIR3 SINE MIR 3 208 0 227 217 0 0 chr20 35068948 35068994 -37084888 - MIR SINE MIR -115 147 102 354 205 0 0 chr20 35070606 35070684 -37083198 + (CGG)n Simple_repeat Simple_repeat 2 79 0 310 280 223 57 chr20 35071105 35071316 -37082566 + L3 LINE CR1 1298 1543 -34 412 280 65 34 chr20 35071352 35071585 -37082297 - MIR SINE MIR -13 249 8 249 297 99 22 chr20 35072381 35072472 -37081410 - L2 LINE L2 -93 3179 3082 304 299 28 83 chr20 35073264 35073408 -37080474 - MIR3 SINE MIR -72 136 1 200 213 21 0 chr20 35073416 35073463 -37080419 + CT-rich Low_complexity Low_complexity 1 48 0 209 348 152 21 chr20 35074099 35074389 -37079493 + L2 LINE L2 2526 2853 -461 190 254 51 17 chr20 35075781 35075840 -37078042 + MIR SINE MIR 89 149 -59 438 286 27 34 chr20 35076498 35076645 -37077237 + MIR3 SINE MIR 15 160 -48 858 241 161 57 chr20 35076669 35077055 -37076827 - MLT1H LTR MaLR -4 545 120 294 333 45 11 chr20 35077106 35077283 -37076599 + MER117 DNA MER1_type 15 197 0 190 368 23 23 chr20 35077369 35077456 -37076426 + MIR SINE MIR 17 103 -105 479 234 113 0 chr20 35077586 35077727 -37076155 - MLT1K LTR MaLR -5 583 427 840 231 6 0 chr20 35077728 35077888 -37075994 + AluJb SINE Alu 134 294 -18 659 217 213 21 chr20 35078072 35078480 -37075402 + MLT1G3 LTR MaLR 90 542 0 2280 53 0 4 chr20 35078548 35078829 -37075053 + AluY SINE Alu 2 281 -30 345 239 157 30 chr20 35079355 35079489 -37074393 + L2 LINE L2 2929 3079 -193 240 35 0 0 chr20 35079534 35079563 -37074319 + (CA)n Simple_repeat Simple_repeat 2 30 0 1218 159 35 22 chr20 35079572 35079799 -37074083 - AluJb SINE Alu -26 286 57 264 235 137 49 chr20 35080458 35080560 -37073322 - L2 LINE L2 -14 3299 3189 189 267 35 47 chr20 35080652 35080738 -37073144 - L2 LINE L2 -1576 1738 1654 2023 117 3 7 chr20 35080747 35081046 -37072836 + AluSx SINE Alu 1 298 -14 1667 109 8 23 chr20 35081107 35081364 -37072518 - AluSg SINE Alu -17 293 41 1677 157 3 17 chr20 35084307 35084606 -37069276 - AluJb SINE Alu -17 295 1 22 0 0 0 chr20 35084608 35084630 -37069252 + AT_rich Low_complexity Low_complexity 1 22 0 227 165 0 139 chr20 35084909 35084988 -37068894 + L1MB8 LINE L1 6044 6111 -67 2168 93 0 10 chr20 35084989 35085289 -37068593 + AluSx SINE Alu 1 297 -15 30 0 0 0 chr20 35085302 35085332 -37068550 + AT_rich Low_complexity Low_complexity 1 30 0 245 219 98 12 chr20 35085338 35085420 -37068462 - LTR9 LTR ERV1 -80 532 444 2311 73 10 0 chr20 35085945 35086247 -37067635 + AluY SINE Alu 2 306 -5 534 296 126 9 chr20 35086412 35086635 -37067247 + MIR SINE MIR 14 262 0 1626 167 11 7 chr20 35087451 35087733 -37066149 - AluJo SINE Alu -15 297 15 246 203 0 17 chr20 35088161 35088220 -37065662 + L1ME4a LINE L1 5719 5776 -345 236 269 130 34 chr20 35088420 35088866 -37065016 + L1ME4a LINE L1 5483 6016 -105 2061 90 10 13 chr20 35088866 35089166 -37064716 - AluSg SINE Alu -10 300 2 236 269 130 34 chr20 35089166 35089283 -37064599 + L1ME4a LINE L1 6016 6120 -1 337 228 140 9 chr20 35089309 35089423 -37064459 + L1ME4a LINE L1 5993 6121 0 1091 159 0 59 chr20 35089814 35090034 -37063848 + AluJo SINE Alu 89 295 -17 185 235 294 69 chr20 35090482 35090584 -37063298 + L2 LINE L2 3147 3271 -1 27 0 0 0 chr20 35091489 35091516 -37062366 + AT_rich Low_complexity Low_complexity 1 27 0 2270 77 3 3 chr20 35091519 35091818 -37062064 + AluSp SINE Alu 1 299 -14 831 151 0 27 chr20 35092236 35092382 -37061500 - FLAM_C SINE Alu 0 143 2 1956 117 45 0 chr20 35092643 35092934 -37060948 + AluSq SINE Alu 1 304 -9 1732 205 91 104 chr20 35093061 35093584 -37060298 - MER21B LTR ERV1 -69 794 281 2052 119 0 0 chr20 35093584 35093870 -37060012 - AluSx SINE Alu -26 286 1 1732 205 91 104 chr20 35093870 35094029 -37059853 - MER21B LTR ERV1 -582 281 121 475 203 80 58 chr20 35094072 35094210 -37059672 - MER21B LTR ERV1 -710 153 13 2013 99 33 0 chr20 35094718 35094991 -37058891 + AluSx SINE Alu 1 282 -30 1432 99 42 0 chr20 35094991 35095015 -37058867 + AluSq SINE Alu 1 306 0 2403 105 0 0 chr20 35095225 35095530 -37058352 - AluSx SINE Alu -7 305 1 2264 90 0 17 chr20 35097263 35097564 -37056318 - AluSc SINE Alu -13 296 1 195 42 0 0 chr20 35099053 35099077 -37054805 + (TTC)n Simple_repeat Simple_repeat 2 25 0 241 264 55 22 chr20 35099379 35099470 -37054412 - MIR3 SINE MIR -8 200 107 1715 179 17 3 chr20 35099474 35099775 -37054107 - AluJo SINE Alu -7 305 1 1703 181 10 10 chr20 35099980 35100284 -37053598 - AluJb SINE Alu -8 304 1 2344 85 10 0 chr20 35100455 35100749 -37053133 + AluY SINE Alu 1 297 -14 471 262 169 31 chr20 35100893 35101118 -37052764 + MIR SINE MIR 6 261 -1 834 184 114 6 chr20 35102492 35102650 -37051232 - FAM SINE Alu 0 175 1 1504 163 7 18 chr20 35102973 35103250 -37050632 + AluJo SINE Alu 39 312 0 1990 107 43 23 chr20 35103378 35103677 -37050205 + AluSg SINE Alu 1 305 -5 321 229 209 0 chr20 35103945 35104050 -37049832 + MIR3 SINE MIR 29 155 -53 373 250 81 16 chr20 35104492 35104616 -37049266 + MIR SINE MIR 61 192 -70 1006 187 129 4 chr20 35106477 35106702 -37047180 - MER90 LTR ERV1 -6 608 356 1212 96 34 17 chr20 35106702 35106880 -37047002 - AluSg/x SINE Alu -3 309 129 2212 121 3 0 chr20 35106901 35107208 -37046674 + AluSx SINE Alu 1 308 -4 231 114 0 0 chr20 35107210 35107245 -37046637 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr20 35107278 35107299 -37046583 + (A)n Simple_repeat Simple_repeat 1 21 0 594 150 0 30 chr20 35107299 35107399 -37046483 - AluSg/x SINE Alu -91 221 125 2262 85 0 0 chr20 35107416 35107699 -37046183 + AluSc SINE Alu 1 283 -26 2355 66 3 33 chr20 35107718 35108021 -37045861 + AluSg SINE Alu 1 294 -16 2335 74 7 0 chr20 35108049 35108362 -37045520 - AluSp SINE Alu 0 315 1 924 202 32 18 chr20 35108364 35108582 -37045300 - MER90 LTR ERV1 -349 226 6 293 263 75 81 chr20 35108726 35108886 -37044996 - MIR SINE MIR -90 172 14 1240 131 13 85 chr20 35108967 35109203 -37044679 - MER20 DNA MER1_type 0 219 1 830 136 40 0 chr20 35109422 35109547 -37044335 + FLAM_C SINE Alu 1 130 -3 21 0 0 0 chr20 35109547 35109568 -37044314 + AT_rich Low_complexity Low_complexity 1 21 0 2343 80 0 10 chr20 35109685 35109985 -37043897 - AluY SINE Alu -14 297 1 180 0 0 0 chr20 35110418 35110438 -37043444 + (CA)n Simple_repeat Simple_repeat 2 21 0 294 292 0 14 chr20 35110643 35110715 -37043167 - MIR3 SINE MIR -125 83 13 632 258 65 18 chr20 35110883 35111100 -37042782 + L2 LINE L2 2393 2619 -695 356 201 74 116 chr20 35111112 35111301 -37042581 + L2 LINE L2 3119 3299 -14 2377 90 0 0 chr20 35111303 35111603 -37042279 + AluSx SINE Alu 1 300 -12 339 244 84 17 chr20 35112126 35112245 -37041637 + L2 LINE L2 3187 3313 0 971 130 0 0 chr20 35112424 35112555 -37041327 + FLAM_C SINE Alu 1 131 -12 371 328 90 20 chr20 35112848 35113049 -37040833 + L2 LINE L2 2843 3057 -215 1719 141 34 41 chr20 35113408 35113699 -37040183 - AluJo SINE Alu -11 301 13 346 183 0 28 chr20 35113829 35113891 -37039991 + L2 LINE L2 3201 3262 -10 1830 145 6 44 chr20 35113891 35114208 -37039674 + AluJo SINE Alu 1 305 -7 3655 155 45 60 chr20 35114286 35114552 -37039330 + L1MB2 LINE L1 5428 5696 -475 2335 103 0 6 chr20 35114552 35114863 -37039019 + AluSq SINE Alu 1 309 -4 3655 155 45 60 chr20 35114863 35115351 -37038531 + L1MB2 LINE L1 5696 6171 0 694 291 53 8 chr20 35116926 35117173 -37036709 - MIR SINE MIR -3 259 2 252 307 84 39 chr20 35117248 35117427 -37036455 - MIR SINE MIR -56 206 20 2197 119 3 13 chr20 35117476 35117788 -37036094 - AluSg SINE Alu -1 309 1 3574 249 107 60 chr20 35117857 35118892 -37034990 + HAL1 LINE L1 2 1144 -1363 1504 191 0 56 chr20 35118892 35119039 -37034843 + AluJo SINE Alu 1 124 -188 2325 90 0 0 chr20 35119039 35119373 -37034509 + AluY SINE Alu 1 334 0 1504 191 0 56 chr20 35119373 35119547 -37034335 + AluJo SINE Alu 124 306 -6 3574 249 107 60 chr20 35119547 35120160 -37033722 + HAL1 LINE L1 1144 1727 -780 1814 143 96 3 chr20 35120156 35120499 -37033383 + L1 LINE L1 4623 4997 -1149 * 1165 167 9 5 chr20 35120499 35120715 -37033167 + LTR5 LTR ERVK 1 217 -752 2554 69 0 0 chr20 35120726 35121029 -37032853 + AluY SINE Alu 1 303 -8 2382 64 0 0 chr20 35121029 35121309 -37032573 + AluY SINE Alu 17 296 -15 2835 186 28 64 chr20 35121311 35122087 -37031795 + LTR5 LTR ERVK 222 969 0 4256 162 18 21 chr20 35122087 35122632 -37031250 + HERVK LTR ERVK 1 545 -6698 2455 75 0 7 chr20 35122632 35122937 -37030945 + AluY SINE Alu 1 303 -8 4256 162 18 21 chr20 35122937 35123151 -37030731 + HERVK LTR ERVK 545 758 -6485 3588 131 33 14 chr20 35123221 35123802 -37030080 + HERVK LTR ERVK 733 1324 -5919 * 11998 81 5 0 chr20 35123790 35125338 -37028544 + HERVK LTR ERVK 3635 5189 -2054 195 42 0 0 chr20 35125342 35125366 -37028516 + (TCTCCC)n Simple_repeat Simple_repeat 2 25 0 6330 68 22 13 chr20 35125366 35126224 -37027658 + SVA Other Other 1 866 -520 6317 79 25 45 chr20 35126258 35127263 -37026619 + SVA Other Other 430 1414 0 12618 123 2 1 chr20 35127278 35129148 -37024734 + HERVK LTR ERVK 5533 7242 -1 3935 184 34 50 chr20 35129149 35130134 -37023748 + LTR5 LTR ERVK 1 969 0 6195 121 16 54 chr20 35130134 35130559 -37023323 + L1MA4A LINE L1 4992 5431 -872 1993 106 31 31 chr20 35130559 35130851 -37023031 + AluSq SINE Alu 1 292 -21 6195 121 16 54 chr20 35130851 35131273 -37022609 + L1MA4A LINE L1 5431 5867 -436 1789 164 3 14 chr20 35131273 35131566 -37022316 + AluJo SINE Alu 1 290 -22 6195 121 16 54 chr20 35131566 35131578 -37022304 + L1MA4A LINE L1 5867 5878 -425 2567 40 3 7 chr20 35131578 35131875 -37022007 + AluY SINE Alu 5 300 -11 6195 121 16 54 chr20 35131875 35131898 -37021984 + L1MA4A LINE L1 5878 5900 -403 2106 113 7 3 chr20 35131898 35132205 -37021677 + AluJb SINE Alu 1 308 0 6195 121 16 54 chr20 35132205 35132680 -37021202 + L1MA4A LINE L1 5900 6302 -1 730 229 103 60 chr20 35132681 35132982 -37020900 + HAL1 LINE L1 1775 2088 -419 636 198 56 0 chr20 35132982 35133108 -37020774 + FLAM_A SINE Alu 1 133 0 276 149 0 0 chr20 35133112 35133159 -37020723 + (GA)n Simple_repeat Simple_repeat 1 47 0 314 253 7 67 chr20 35133159 35133309 -37020573 + HAL1 LINE L1 2075 2215 -292 899 181 141 40 chr20 35133335 35133505 -37020377 + MSTA LTR MaLR 1 201 -227 2390 96 3 0 chr20 35133505 35133807 -37020075 + AluSg SINE Alu 1 303 -7 899 181 141 40 chr20 35133807 35133863 -37020019 + MSTA LTR MaLR 201 250 -178 4538 235 100 23 chr20 35133870 35134290 -37019592 - L1PBb LINE L1 -3549 3300 2914 2305 105 7 0 chr20 35134290 35134596 -37019286 - AluSq SINE Alu -5 308 1 4538 235 100 23 chr20 35134596 35134887 -37018995 - L1PBb LINE L1 -3935 2914 2647 1503 153 0 32 chr20 35134887 35135135 -37018747 + AluJo SINE Alu 56 295 -17 4538 235 100 23 chr20 35135135 35135963 -37017919 - L1PBb LINE L1 -4202 2647 1590 2083 102 3 56 chr20 35135963 35136267 -37017615 - AluSq SINE Alu -23 290 3 4538 235 100 23 chr20 35136267 35136444 -37017438 - L1PBb LINE L1 -5259 1590 1428 3670 200 37 28 chr20 35136927 35137259 -37016623 - L1PBb LINE L1 -6116 733 406 2456 35 0 17 chr20 35137259 35137548 -37016334 + AluY SINE Alu 22 305 -6 3670 200 37 28 chr20 35137548 35137940 -37015942 - L1PBb LINE L1 -6443 406 2 2098 90 7 28 chr20 35138128 35138298 -37015584 + AluSx SINE Alu 1 164 -148 2084 121 82 62 chr20 35138298 35138737 -37015145 - LTR7 LTR ERV1 -2 448 1 2098 90 7 28 chr20 35138737 35138854 -37015028 + AluSx SINE Alu 164 282 -30 639 264 67 67 chr20 35139016 35139315 -37014567 - MER101B LTR ERV1 -271 299 1 304 274 133 35 chr20 35139392 35139505 -37014377 - LTR49-int LTR ERV1 -1115 7005 6882 851 167 8 0 chr20 35139566 35139698 -37014184 + FLAM_C SINE Alu 1 133 0 1753 150 64 108 chr20 35139802 35139829 -37014053 - LTR49-int LTR ERV1 -1830 4501 4474 1404 186 89 36 chr20 35139829 35140109 -37013773 + AluJb SINE Alu 2 296 -6 1753 150 64 108 chr20 35140109 35140494 -37013388 - LTR49-int LTR ERV1 -1857 4474 4146 2300 81 3 16 chr20 35140494 35140801 -37013081 + AluSg SINE Alu 1 303 -7 1753 150 64 108 chr20 35140801 35140919 -37012963 - LTR49-int LTR ERV1 -2185 4146 4024 295 181 60 84 chr20 35140918 35141001 -37012881 - LTR49-int LTR ERV1 -2680 3918 3838 * 195 42 0 0 chr20 35141001 35141025 -37012857 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2285 74 7 14 chr20 35141028 35141313 -37012569 - AluY SINE Alu -28 283 1 1809 221 53 40 chr20 35141314 35141671 -37012211 - LTR49-int LTR ERV1 -2557 2566 2215 2196 121 7 0 chr20 35141671 35141976 -37011906 - AluSx SINE Alu -5 307 1 1809 221 53 40 chr20 35141976 35142444 -37011438 - LTR49-int LTR ERV1 -2908 2215 1707 24 0 0 0 chr20 35142465 35142489 -37011393 + AT_rich Low_complexity Low_complexity 1 24 0 2468 83 0 13 chr20 35142543 35142857 -37011025 - AluSg SINE Alu 0 310 1 944 286 100 24 chr20 35142860 35143189 -37010693 - L1MEd LINE L1 -5408 711 358 2205 115 0 20 chr20 35143353 35143657 -37010225 - AluSx SINE Alu -14 298 1 243 125 0 0 chr20 35143684 35143724 -37010158 + (GA)n Simple_repeat Simple_repeat 1 40 0 449 260 16 0 chr20 35143735 35143862 -37010020 - L1MEd LINE L1 -5985 134 6 295 203 0 14 chr20 35144614 35144683 -37009199 - L2 LINE L2 -314 2958 2891 1898 159 0 0 chr20 35144831 35145121 -37008761 - AluSx SINE Alu -22 290 1 383 200 72 72 chr20 35145145 35145270 -37008612 - L1ME1 LINE L1 -2 6162 6038 742 72 9 9 chr20 35145335 35145446 -37008436 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 807 205 6 18 chr20 35145450 35145615 -37008267 - AluJo SINE Alu -25 287 124 5325 61 56 129 chr20 35145615 35146506 -37007376 + LTR12 LTR ERV1 1 826 0 14053 103 10 14 chr20 35146554 35149396 -37004486 + HERV9 LTR ERV1 58 2972 -5427 1041 133 7 0 chr20 35149395 35149546 -37004336 + HERV9 LTR ERV1 4756 4907 -3492 * 394 174 33 0 chr20 35149546 35149638 -37004244 + HERV9 LTR ERV1 4865 4959 -3440 2024 97 12 29 chr20 35149640 35150452 -37003430 + HERV17 LTR ERV1 704 1720 -5176 * 4919 88 2 0 chr20 35150447 35151085 -37002797 + HERV17 LTR ERV1 7757 8395 -4 4495 77 113 3 chr20 35151089 35151709 -37002173 + LTR12 LTR ERV1 1 688 0 1115 183 32 137 chr20 35151711 35151985 -37001897 - L1ME1 LINE L1 -126 6040 5739 1210 164 67 103 chr20 35151985 35152098 -37001784 + AluJo SINE Alu 3 118 -194 189 0 0 0 chr20 35152098 35152119 -37001763 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1210 164 67 103 chr20 35152119 35152163 -37001719 + AluJo SINE Alu 118 162 -150 3834 179 33 51 chr20 35152163 35153112 -37000770 + LTR5 LTR ERVK 1 932 -37 1210 164 67 103 chr20 35153112 35153265 -37000617 + AluJo SINE Alu 162 303 -9 1115 183 32 137 chr20 35153265 35153400 -37000482 - L1ME1 LINE L1 -427 5739 5674 409 261 108 62 chr20 35153503 35153679 -37000203 + MLT1K LTR MaLR 142 325 -263 1417 98 0 16 chr20 35153968 35153983 -36999899 + AluSg/x SINE Alu 121 135 -177 2424 99 0 3 chr20 35153983 35154297 -36999585 + AluSq SINE Alu 1 313 0 1417 98 0 16 chr20 35154297 35154474 -36999408 + AluSg/x SINE Alu 135 310 -2 2190 123 28 36 chr20 35154512 35154783 -36999099 - MLT1B LTR MaLR 0 390 121 1684 197 0 3 chr20 35154783 35155078 -36998804 - AluJo SINE Alu -18 294 1 2190 123 28 36 chr20 35155078 35155163 -36998719 - MLT1B LTR MaLR -269 121 37 1641 112 18 0 chr20 35155179 35155402 -36998480 - AluSx SINE Alu -13 297 71 2292 94 7 7 chr20 35155402 35155698 -36998184 - AluSq SINE Alu -16 297 1 528 179 0 0 chr20 35155699 35155783 -36998099 - AluSx SINE Alu -227 85 2 228 146 0 24 chr20 35155784 35155825 -36998057 - MLT1B LTR MaLR -348 42 3 2467 81 0 0 chr20 35156006 35156302 -36997580 - AluSg SINE Alu -14 296 1 874 144 0 0 chr20 35156326 35156444 -36997438 - FLAM_C SINE Alu -18 125 8 1988 150 7 7 chr20 35156463 35156769 -36997113 - AluSx SINE Alu -6 306 1 322 316 47 18 chr20 35156769 35156932 -36996950 - L2 LINE L2 -564 2750 2580 1110 122 28 28 chr20 35157085 35157265 -36996617 - LTR9 LTR ERV1 -432 180 1 364 285 89 0 chr20 35157275 35157433 -36996449 + MIR SINE MIR 21 192 -70 2395 97 0 0 chr20 35157439 35157747 -36996135 + AluSq SINE Alu 4 311 -2 1954 125 76 0 chr20 35157784 35158072 -36995810 - AluJb SINE Alu -2 310 1 213 311 33 0 chr20 35158076 35158166 -36995716 - MIR SINE MIR -70 192 100 213 256 0 44 chr20 35158561 35158651 -36995231 + A-rich Low_complexity Low_complexity 2 87 0 409 308 39 6 chr20 35158898 35159054 -36994828 - L2 LINE L2 -236 3036 2876 189 0 0 0 chr20 35159087 35159108 -36994774 + (A)n Simple_repeat Simple_repeat 1 21 0 1987 153 16 0 chr20 35159322 35159629 -36994253 - AluJb SINE Alu 0 312 1 2294 113 0 0 chr20 35159817 35160118 -36993764 - AluSg SINE Alu -9 301 1 834 211 0 0 chr20 35160427 35160593 -36993289 + FRAM SINE Alu 1 166 -10 1884 117 55 10 chr20 35160612 35160903 -36992979 - AluSx SINE Alu -8 304 1 713 221 13 25 chr20 35161038 35161196 -36992686 - L2 LINE L2 0 3313 3158 2532 53 0 10 chr20 35161460 35161761 -36992121 - AluY SINE Alu -13 298 1 1492 167 65 18 chr20 35161769 35162045 -36991837 - AluJo SINE Alu -23 289 1 2137 112 3 0 chr20 35162071 35162386 -36991496 + AluSp SINE Alu 1 316 0 1822 88 0 13 chr20 35162387 35162625 -36991257 + AluY SINE Alu 57 291 -20 2035 136 7 3 chr20 35162769 35163078 -36990804 - AluSg SINE Alu 0 310 1 2309 80 0 35 chr20 35163078 35163391 -36990491 - AluSc SINE Alu -6 303 1 2315 117 0 0 chr20 35163394 35163703 -36990179 - AluSx SINE Alu -3 309 1 2139 91 3 57 chr20 35164837 35165155 -36988727 - AluSg SINE Alu -9 301 1 1001 133 0 0 chr20 35165160 35165303 -36988579 - FLAM_C SINE Alu 0 143 1 953 183 101 82 chr20 35165879 35166108 -36987774 + MER4C LTR ERV1 1 224 -241 2576 39 0 10 chr20 35166108 35166420 -36987462 + AluY SINE Alu 1 309 -2 953 183 101 82 chr20 35166420 35166725 -36987157 + MER4C LTR ERV1 224 465 0 2368 65 7 3 chr20 35166971 35167261 -36986621 + AluY SINE Alu 1 291 -20 350 250 48 0 chr20 35167795 35167899 -36985983 + L1MEc LINE L1 404 512 -5884 1925 237 39 39 chr20 35167901 35168590 -36985292 + L1MEc LINE L1 766 1454 -4942 207 398 8 8 chr20 35168590 35168718 -36985164 + L2 LINE L2 2564 2691 -623 2307 85 0 26 chr20 35169173 35169480 -36984402 + AluSc SINE Alu 1 299 -10 222 242 8 153 chr20 35170390 35170514 -36983368 + MER5A DNA MER1_type 56 161 -28 690 128 103 17 chr20 35170915 35171032 -36982850 - FLAM_A SINE Alu -6 127 1 181 143 48 24 chr20 35171044 35171086 -36982796 - L2 LINE L2 -3 3310 3268 268 271 0 12 chr20 35171133 35171218 -36982664 - MLT1J LTR MaLR -33 478 395 572 242 114 0 chr20 35171291 35171440 -36982442 - MER69A DNA AcHobo -11 166 1 1350 163 67 8 chr20 35171497 35171737 -36982145 + AluJo SINE Alu 29 282 -30 1895 130 60 11 chr20 35171745 35172030 -36981852 - AluSx SINE Alu -13 299 1 2372 76 0 0 chr20 35172050 35172340 -36981542 - AluY SINE Alu -19 292 3 278 229 50 142 chr20 35172451 35172501 -36981381 - MER83B LTR ERV1 -29 349 296 2456 84 0 0 chr20 35172501 35172811 -36981071 + AluSg SINE Alu 1 310 0 278 229 50 142 chr20 35172811 35172921 -36980961 - MER83B LTR ERV1 -82 296 212 2357 85 0 13 chr20 35172921 35173227 -36980655 - AluSg SINE Alu -7 303 2 278 229 50 142 chr20 35173227 35173283 -36980599 - MER83B LTR ERV1 -166 212 152 764 212 53 18 chr20 35173871 35174041 -36979841 + MER58A DNA MER1_type 1 176 -48 2182 124 3 0 chr20 35174198 35174497 -36979385 + AluSg SINE Alu 1 300 -10 2552 91 51 6 chr20 35174997 35175347 -36978535 - MER51B LTR ERV1 -11 366 1 2133 112 40 16 chr20 35175446 35175749 -36978133 - AluSx SINE Alu -2 310 1 251 121 0 0 chr20 35175764 35175797 -36978085 + L1MC5 LINE L1 6731 6763 -1198 679 177 115 0 chr20 35175802 35175932 -36977950 - MER46A DNA MER2_type -91 145 1 1749 181 3 3 chr20 35176245 35176538 -36977344 - AluJb SINE Alu -15 297 5 221 230 93 108 chr20 35176875 35177014 -36976868 - MIR SINE MIR -30 232 96 298 256 120 0 chr20 35177222 35177339 -36976543 - L2 LINE L2 -6 3307 3177 2219 121 0 0 chr20 35177364 35177670 -36976212 + AluSq SINE Alu 1 306 -7 463 173 0 55 chr20 35178031 35178141 -36975741 + FLAM_A SINE Alu 38 141 -1 2803 13 0 0 chr20 35178396 35178696 -36975186 + AluY SINE Alu 1 300 -11 558 259 141 0 chr20 35179368 35179538 -36974344 - MIR SINE MIR -13 249 56 1677 80 27 27 chr20 35180357 35180611 -36973271 - AluSc SINE Alu 0 310 57 1239 218 78 74 chr20 35181854 35182369 -36971513 - MER113 DNA MER1_type? -3 518 2 265 242 267 8 chr20 35182647 35182767 -36971115 - MIR SINE MIR -74 188 38 2470 77 3 0 chr20 35182798 35183097 -36970785 - AluSp SINE Alu -13 300 1 463 352 48 15 chr20 35183950 35184223 -36969659 + L2 LINE L2 2127 2408 -906 260 109 0 22 chr20 35185229 35185275 -36968607 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 2296 107 7 3 chr20 35185286 35185586 -36968296 - AluSq SINE Alu -12 301 1 2094 111 37 0 chr20 35185589 35185886 -36967996 - AluSp SINE Alu -5 308 1 728 168 148 7 chr20 35185886 35186041 -36967841 - AluJo SINE Alu -18 294 118 231 204 0 0 chr20 35186041 35186090 -36967792 + T-rich Low_complexity Low_complexity 1 49 0 1609 124 36 7 chr20 35186377 35186651 -36967231 - L1MA4 LINE L1 -7 6293 6012 275 284 0 12 chr20 35188416 35188497 -36965385 + CT-rich Low_complexity Low_complexity 3 82 0 184 30 61 0 chr20 35189341 35189374 -36964508 + T-rich Low_complexity Low_complexity 126 160 0 2655 36 20 0 chr20 35189725 35190028 -36963854 - AluY SINE Alu -2 309 1 22 0 0 0 chr20 35190543 35190565 -36963317 + AT_rich Low_complexity Low_complexity 1 22 0 2065 119 42 0 chr20 35190648 35190934 -36962948 + AluSg SINE Alu 1 298 -12 1601 138 24 102 chr20 35191612 35191945 -36961937 - AluYb8 SINE Alu -11 307 1 1877 152 28 0 chr20 35192045 35192334 -36961548 - AluJo SINE Alu -15 297 1 2682 210 69 72 chr20 35192344 35193301 -36960581 - L1ME3A LINE L1 -1 6238 5285 1235 177 4 17 chr20 35193301 35193538 -36960344 - MER96B DNA MER1_type? -181 236 3 237 246 34 68 chr20 35193539 35193657 -36960225 - L1ME3A LINE L1 -927 5288 5175 798 109 0 0 chr20 35194504 35194623 -36959259 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 23 54 0 0 chr20 35195613 35195650 -36958232 + AT_rich Low_complexity Low_complexity 1 37 0 531 202 54 62 chr20 35195736 35195865 -36958017 + MER3 DNA MER1_type 2 129 -80 29 28 0 0 chr20 35195974 35196010 -36957872 + AT_rich Low_complexity Low_complexity 1 36 0 2152 251 68 50 chr20 35196049 35196354 -36957528 - L1ME3A LINE L1 -1147 5068 4770 2386 61 0 0 chr20 35196354 35196650 -36957232 - AluY SINE Alu -2 309 14 2152 251 68 50 chr20 35196650 35196939 -36956943 - L1ME3A LINE L1 -1445 4770 4487 182 37 37 0 chr20 35196939 35196966 -36956916 + (TA)n Simple_repeat Simple_repeat 2 29 0 1793 154 3 0 chr20 35196966 35197252 -36956630 - AluSx SINE Alu -25 287 1 2152 251 68 50 chr20 35197252 35197272 -36956610 - L1ME3A LINE L1 -1728 4487 4469 2125 91 10 13 chr20 35197272 35197579 -36956303 - AluSq SINE Alu -7 306 1 2152 251 68 50 chr20 35197579 35197769 -36956113 - L1ME3A LINE L1 -1746 4469 4284 2140 112 7 0 chr20 35197769 35198074 -36955808 - AluSp SINE Alu -6 307 1 2152 251 68 50 chr20 35198074 35198374 -36955508 - L1ME3A LINE L1 -1931 4284 3941 5720 149 49 45 chr20 35198385 35198616 -36955266 - L1MA4 LINE L1 0 6300 6071 4957 77 50 131 chr20 35198616 35199515 -36954367 - LTR12 LTR ERV1 0 826 1 5720 149 49 45 chr20 35199515 35199545 -36954337 - L1MA4 LINE L1 -229 6071 6043 1976 128 3 13 chr20 35199545 35199851 -36954031 - AluSx SINE Alu -9 303 1 5720 149 49 45 chr20 35199851 35200122 -36953760 - L1MA4 LINE L1 -257 6043 5774 1983 125 30 10 chr20 35200122 35200426 -36953456 - AluSg SINE Alu 0 310 1 5720 149 49 45 chr20 35200426 35201323 -36952559 - L1MA4 LINE L1 -526 5774 4882 2019 78 45 0 chr20 35201323 35201632 -36952250 - AluY SINE Alu 0 321 1 5720 149 49 45 chr20 35201632 35201901 -36951981 - L1MA4 LINE L1 -1418 4882 4615 1732 164 6 13 chr20 35201901 35202212 -36951670 - AluJb SINE Alu -3 309 1 5720 149 49 45 chr20 35202212 35202697 -36951185 - L1MA4 LINE L1 -1685 4615 4120 7262 184 150 34 chr20 35202697 35204270 -36949612 + MER52A LTR ERV1 1 1755 0 713 132 0 0 chr20 35204270 35204376 -36949506 - L1MA4 LINE L1 -2023 4123 4018 524 270 25 15 chr20 35204378 35204578 -36949304 - L1ME3A LINE L1 -2267 3948 3747 1369 144 3 129 chr20 35204578 35204918 -36948964 - AluJo SINE Alu -15 297 1 838 308 88 32 chr20 35204921 35205742 -36948140 - L1ME3A LINE L1 -4465 1931 1065 923 190 106 127 chr20 35205753 35206311 -36947571 - L1MC4 LINE L1 -1 8041 7496 431 196 87 87 chr20 35206334 35206553 -36947329 - L1MC4a LINE L1 -550 7258 7080 1367 206 107 50 chr20 35206562 35206926 -36946956 + MSTD LTR MaLR 12 396 0 581 192 17 17 chr20 35206928 35207048 -36946834 + MSTD-int LTR MaLR 2 121 -1614 1611 245 103 4 chr20 35209931 35210483 -36943399 - L1M4 LINE L1 -925 5221 4615 2050 124 0 0 chr20 35210711 35211018 -36942864 + AluSx SINE Alu 1 307 -5 2280 42 0 7 chr20 35211110 35211418 -36942464 - AluY SINE Alu 0 306 1 325 286 53 70 chr20 35211521 35211692 -36942190 - L1ME3A LINE L1 -5901 304 137 2016 72 69 4 chr20 35212242 35212518 -36941364 - AluY SINE Alu -17 294 1 482 344 92 13 chr20 35212821 35213048 -36940834 - MIR SINE MIR 0 262 18 200 269 139 56 chr20 35213289 35213364 -36940518 - L2 LINE L2 -7 3265 3177 2421 48 0 3 chr20 35213364 35213657 -36940225 + AluY SINE Alu 2 293 -18 200 269 139 56 chr20 35213657 35213689 -36940193 - L2 LINE L2 -95 3177 3149 2050 118 7 0 chr20 35213870 35214167 -36939715 + AluJb SINE Alu 1 299 -13 270 176 0 0 chr20 35214484 35214535 -36939347 + T-rich Low_complexity Low_complexity 1 51 0 2453 65 0 0 chr20 35214652 35214960 -36938922 + AluY SINE Alu 1 308 -3 1975 136 0 7 chr20 35215383 35215697 -36938185 + AluJb SINE Alu 1 312 0 313 293 75 28 chr20 35216067 35216173 -36937709 - MER5A DNA MER1_type -44 145 35 336 24 0 0 chr20 35216181 35216222 -36937660 + (TCTCCC)n Simple_repeat Simple_repeat 1 41 0 6998 62 11 16 chr20 35216222 35217793 -36936089 + SVA Other Other 57 1386 0 2029 107 4 0 chr20 35218591 35218894 -36934988 - AluSg SINE Alu 0 304 1 418 266 114 44 chr20 35218895 35219414 -36934468 - L1M4 LINE L1 -1275 4871 4317 2137 105 3 13 chr20 35219448 35219752 -36934130 - AluSx SINE Alu -11 301 1 4097 200 70 34 chr20 35219807 35219903 -36933979 + L1ME LINE L1 3851 3942 -2204 2085 121 0 13 chr20 35219903 35220209 -36933673 - AluSx SINE Alu -10 302 1 4097 200 70 34 chr20 35220209 35220311 -36933571 + L1ME LINE L1 3942 4039 -2107 866 142 0 8 chr20 35220311 35220445 -36933437 - FLAM_C SINE Alu 0 133 1 4097 200 70 34 chr20 35220445 35220906 -36932976 + L1ME LINE L1 4039 4482 -1664 2313 88 0 0 chr20 35220906 35221202 -36932680 + AluSc SINE Alu 1 296 -13 4097 200 70 34 chr20 35221202 35221687 -36932195 + L1ME LINE L1 4482 5038 -1108 343 277 75 36 chr20 35221688 35221832 -36932050 - L1M4 LINE L1 -4037 2607 1191 6596 53 10 48 chr20 35222136 35223128 -36930754 - SVA Other Other 0 1386 433 2631 86 21 98 chr20 35223235 35224885 -36928997 - SVA Other Other -518 868 393 21 36 0 0 chr20 35224936 35224964 -36928918 + GC_rich Low_complexity Low_complexity 1 28 0 1136 200 95 7 chr20 35224975 35225445 -36928437 + L1ME LINE L1 5030 5531 -635 2010 217 42 13 chr20 35225445 35225897 -36927985 - LTR40c LTR ERVL 0 465 1 1292 210 89 11 chr20 35225899 35226180 -36927702 - HERVL40 LTR ERVL -2 5528 5226 * 2052 258 25 13 chr20 35226175 35226699 -36927183 - HERVL40 LTR ERVL -558 4972 4443 2361 82 0 0 chr20 35226699 35227002 -36926880 - AluY SINE Alu -8 303 1 569 93 98 0 chr20 35227003 35227162 -36926720 + L1MB7 LINE L1 5845 6181 -3 3005 243 77 33 chr20 35227164 35227992 -36925890 - HERVL40 LTR ERVL -1570 3960 3096 377 195 0 11 chr20 35228016 35228103 -36925779 + CT-rich Low_complexity Low_complexity 4 89 0 236 156 0 0 chr20 35228124 35228156 -36925726 + Tigger3(Golem) DNA MER2_type 33 64 -2965 1438 93 17 51 chr20 35228156 35228392 -36925490 + AluSg/x SINE Alu 80 307 -3 3253 120 40 24 chr20 35228393 35228715 -36925167 + Tigger3(Golem) DNA MER2_type 338 672 -2357 2211 99 0 0 chr20 35228715 35229017 -36924865 + AluSg SINE Alu 1 302 -8 3253 120 40 24 chr20 35229017 35229193 -36924689 + Tigger3(Golem) DNA MER2_type 672 844 -2185 806 203 25 6 chr20 35229193 35229376 -36924506 + FRAM SINE Alu 1 235 -242 1145 72 6 22 chr20 35229376 35229557 -36924325 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 806 203 25 6 chr20 35229557 35229667 -36924215 + FRAM SINE Alu 235 341 0 332 203 16 0 chr20 35229667 35229731 -36924151 + GA-rich Low_complexity Low_complexity 5 69 0 1025 122 52 103 chr20 35229731 35229813 -36924069 + Tigger3(Golem) DNA MER2_type 831 916 -2113 2248 86 0 17 chr20 35229813 35230115 -36923767 + AluSq SINE Alu 1 297 -16 767 152 8 8 chr20 35230125 35230250 -36923632 + FLAM_C SINE Alu 2 126 -7 1025 122 52 103 chr20 35230250 35230369 -36923513 + Tigger3(Golem) DNA MER2_type 925 1032 -1997 4506 186 80 40 chr20 35230372 35231483 -36922399 - L1 LINE L1 -1110 5036 3882 * 5007 129 32 36 chr20 35231468 35232435 -36921447 - L1M4c LINE L1 -4759 1625 663 989 167 42 0 chr20 35232435 35232603 -36921279 - L1M4c LINE L1 -6206 178 4 1777 78 62 0 chr20 35232791 35233034 -36920848 - AluSq SINE Alu -17 296 39 353 262 148 8 chr20 35233099 35233274 -36920608 - MIR SINE MIR -11 251 35 2129 156 46 85 chr20 35233493 35233973 -36919909 - MER65C LTR ERV1 0 461 1 305 24 24 0 chr20 35235748 35235790 -36918092 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 2078 114 7 0 chr20 35235799 35236088 -36917794 - AluSx SINE Alu -21 291 1 24 32 0 0 chr20 35237301 35237332 -36916550 + AT_rich Low_complexity Low_complexity 1 31 0 2392 35 0 3 chr20 35237339 35237645 -36916237 + AluY SINE Alu 2 306 0 518 294 62 44 chr20 35238058 35238378 -36915504 - L1ME4a LINE L1 -281 5840 5515 2283 84 0 0 chr20 35238609 35238906 -36914976 + AluSg SINE Alu 1 297 -13 2142 91 3 10 chr20 35238946 35239243 -36914639 - AluSg SINE Alu -14 296 2 190 93 23 23 chr20 35239397 35239440 -36914442 + (TA)n Simple_repeat Simple_repeat 1 43 0 203 269 26 13 chr20 35239771 35239849 -36914033 + CT-rich Low_complexity Low_complexity 2 80 0 1433 127 40 4 chr20 35240085 35240313 -36913569 - AluSx SINE Alu -76 236 1 232 256 26 13 chr20 35240386 35240464 -36913418 + T-rich Low_complexity Low_complexity 3 81 0 993 164 0 0 chr20 35240536 35240701 -36913181 - AluJb SINE Alu 0 312 148 2221 91 7 0 chr20 35240856 35241152 -36912730 - AluSg SINE Alu -12 298 1 1588 159 47 4 chr20 35241172 35241448 -36912434 - AluJo SINE Alu -20 292 5 2088 102 3 0 chr20 35241479 35241772 -36912110 + AluSx SINE Alu 1 294 -18 270 292 80 15 chr20 35241776 35241913 -36911969 + MARNA DNA Mariner 398 543 -43 305 286 154 60 chr20 35241937 35242076 -36911806 + MARNA DNA Mariner 216 377 -209 1734 167 10 0 chr20 35242076 35242375 -36911507 + AluJo SINE Alu 1 302 -10 305 286 154 60 chr20 35242375 35242417 -36911465 + MARNA DNA Mariner 377 414 -172 1358 126 0 50 chr20 35242474 35242696 -36911186 + AluSg/x SINE Alu 84 294 -18 475 292 0 0 chr20 35242701 35242814 -36911068 - MIR3 SINE MIR -51 157 45 721 200 80 0 chr20 35243078 35243228 -36910654 + MER45A DNA AcHobo 5 166 -12 698 173 16 16 chr20 35243944 35244071 -36909811 + FLAM_A SINE Alu 1 127 -6 1677 87 5 0 chr20 35244071 35244290 -36909592 + AluSx SINE Alu 1 220 -92 2274 64 0 13 chr20 35244831 35245129 -36908753 - AluY SINE Alu -17 294 1 1975 176 37 3 chr20 35245199 35245552 -36908330 + MLT1A1 LTR MaLR 1 365 0 4156 178 28 64 chr20 35245667 35246665 -36907217 - LTR5 LTR ERVK 0 969 8 2405 74 7 3 chr20 35246665 35246961 -36906921 - AluY SINE Alu -14 297 1 2078 125 10 0 chr20 35246988 35247321 -36906561 - AluSx SINE Alu 0 312 5 2183 117 0 0 chr20 35247606 35247918 -36905964 - AluSx SINE Alu 0 312 1 698 225 36 110 chr20 35247990 35248355 -36905527 + MER46C DNA MER2_type 1 338 0 1234 185 4 66 chr20 35248904 35249011 -36904871 - AluJb SINE Alu -69 243 131 6719 102 20 13 chr20 35249011 35250007 -36903875 + LTR13 LTR ERVK 1 1003 -4 1234 185 4 66 chr20 35250007 35250158 -36903724 - AluJb SINE Alu -181 131 1 934 183 0 30 chr20 35250334 35250503 -36903379 - AluJb SINE Alu -15 297 134 290 47 47 0 chr20 35250582 35250625 -36903257 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 1972 116 39 29 chr20 35250629 35250939 -36902943 - AluSq SINE Alu 0 313 1 34 42 0 0 chr20 35251081 35251129 -36902753 + AT_rich Low_complexity Low_complexity 1 48 0 2372 123 0 0 chr20 35251417 35251727 -36902155 + AluSx SINE Alu 1 310 -2 699 168 87 0 chr20 35251818 35251967 -36901915 - MER58C DNA MER1_type -2 213 52 218 31 0 31 chr20 35252230 35252262 -36901620 + (TA)n Simple_repeat Simple_repeat 2 32 0 322 238 22 84 chr20 35252262 35252456 -36901426 + L1MCa LINE L1 1933 2091 -4335 1547 168 18 36 chr20 35252510 35252790 -36901092 + AluJb SINE Alu 35 309 -3 1931 111 0 11 chr20 35252830 35253100 -36900782 + AluSx SINE Alu 45 311 -1 1445 141 0 19 chr20 35253105 35253318 -36900564 + AluSq SINE Alu 87 295 -18 220 348 6 6 chr20 35253676 35253776 -36900106 + CT-rich Low_complexity Low_complexity 1 100 0 412 198 10 21 chr20 35254290 35254386 -36899496 - MER103 DNA DNA -71 95 1 533 321 12 0 chr20 35254572 35254737 -36899145 - MIR SINE MIR -93 169 3 1893 128 7 49 chr20 35254771 35254918 -36898964 + AluJo SINE Alu 1 130 -182 2025 148 0 0 chr20 35254918 35255208 -36898674 + AluJb SINE Alu 12 301 -11 1893 128 7 49 chr20 35255208 35255365 -36898517 + AluJo SINE Alu 130 292 -20 2393 119 0 0 chr20 35255386 35255696 -36898186 + AluSx SINE Alu 1 310 -2 598 280 70 5 chr20 35255739 35255953 -36897929 - MIR SINE MIR -7 255 28 319 191 101 0 chr20 35256738 35256827 -36897055 + MER113 DNA MER1_type? 3 100 -421 2382 80 19 16 chr20 35256838 35257150 -36896732 + AluSq SINE Alu 1 313 0 3541 168 40 15 chr20 35257152 35257217 -36896665 + Tigger2 DNA MER2_type 1 63 -2655 2244 110 0 10 chr20 35257217 35257526 -36896356 - AluSq SINE Alu -7 306 1 3541 168 40 15 chr20 35257526 35258186 -36895696 + Tigger2 DNA MER2_type 63 744 -1974 1209 112 24 80 chr20 35258306 35258345 -36895537 + Tigger2 DNA MER2_type 2483 2523 -195 1842 187 3 0 chr20 35258345 35258650 -36895232 - AluJb SINE Alu -6 306 1 1209 112 24 80 chr20 35258650 35258796 -36895086 + Tigger2 DNA MER2_type 2523 2653 -65 2071 153 0 3 chr20 35258796 35259090 -36894792 + AluJb SINE Alu 1 293 -19 1209 112 24 80 chr20 35259090 35259153 -36894729 + Tigger2 DNA MER2_type 2653 2718 0 1042 184 100 102 chr20 35259153 35259223 -36894659 + MER113 DNA MER1_type? 147 216 -305 2289 109 7 0 chr20 35259223 35259517 -36894365 + AluSx SINE Alu 1 296 -16 1042 184 100 102 chr20 35259517 35259627 -36894255 + MER113 DNA MER1_type? 216 325 -196 2414 74 10 10 chr20 35259627 35259937 -36893945 + AluY SINE Alu 1 310 -1 2217 113 0 0 chr20 35259946 35260253 -36893629 + AluSx SINE Alu 1 307 0 1042 184 100 102 chr20 35260253 35260436 -36893446 + MER113 DNA MER1_type? 333 521 0 218 320 51 0 chr20 35260554 35260632 -36893250 + MIR3 SINE MIR 82 163 -45 516 239 150 49 chr20 35260668 35260894 -36892988 - L2 LINE L2 -50 3263 3015 370 201 7 0 chr20 35260924 35261005 -36892877 + AluS SINE Alu 1 60 -243 180 0 0 0 chr20 35261015 35261035 -36892847 + (A)n Simple_repeat Simple_repeat 1 20 0 747 198 95 21 chr20 35261035 35261084 -36892798 - Charlie5 DNA MER1_type -11 2613 2569 2259 97 10 7 chr20 35261084 35261384 -36892498 - AluSp SINE Alu -10 303 3 747 198 95 21 chr20 35261384 35261576 -36892306 - Charlie5 DNA MER1_type -55 2569 2354 786 133 50 50 chr20 35261584 35261764 -36892118 - Charlie5 DNA MER1_type -2424 188 9 1861 131 9 58 chr20 35261991 35262319 -36891563 + AluJb SINE Alu 1 312 0 186 102 20 41 chr20 35263191 35263218 -36890664 + (GAAA)n Simple_repeat Simple_repeat 1 28 -20 2434 76 6 10 chr20 35263218 35263532 -36890350 + AluSp SINE Alu 1 313 0 186 102 20 41 chr20 35263532 35263553 -36890329 + (GAAA)n Simple_repeat Simple_repeat 28 48 0 1493 146 0 62 chr20 35263554 35263828 -36890054 + AluJo SINE Alu 47 303 -9 441 274 106 0 chr20 35264194 35264307 -36889575 - L2 LINE L2 0 3272 3148 881 144 0 0 chr20 35264381 35264513 -36889369 - FLAM_C SINE Alu -1 132 1 1424 146 130 0 chr20 35264523 35264793 -36889089 - AluSx SINE Alu 0 306 5 2252 113 3 3 chr20 35265121 35265421 -36888461 - AluSx SINE Alu -12 300 1 250 191 32 16 chr20 35265474 35265537 -36888345 - LTR67 LTR ERVL -3 554 491 3496 170 48 27 chr20 35265800 35266160 -36887722 - MER21B LTR ERV1 -1 862 511 1860 141 74 0 chr20 35266160 35266444 -36887438 + AluJo SINE Alu 1 305 -7 3496 170 48 27 chr20 35266444 35266777 -36887105 - MER21B LTR ERV1 -352 511 155 270 172 31 16 chr20 35266858 35266922 -36886960 + LTR67 LTR ERVL 490 554 -3 414 200 47 11 chr20 35266968 35267086 -36886796 - AluS SINE Alu -235 68 1 186 237 0 0 chr20 35267758 35267796 -36886086 - L2 LINE L2 -11 3302 3265 302 336 72 24 chr20 35267839 35267964 -36885918 - MIR SINE MIR -125 137 7 1945 127 7 25 chr20 35268224 35268507 -36885375 + AluJo SINE Alu 5 282 -30 271 262 206 0 chr20 35268514 35268621 -36885261 + MIR3 SINE MIR 37 165 -43 2523 72 3 0 chr20 35268682 35268987 -36884895 - AluSx SINE Alu -6 306 1 557 292 68 30 chr20 35269069 35269226 -36884656 - MLT1K LTR MaLR -31 557 385 1924 147 6 44 chr20 35269226 35269546 -36884336 - AluSx SINE Alu -4 308 1 557 292 68 30 chr20 35269546 35269652 -36884230 - MLT1K LTR MaLR -203 385 284 183 264 55 82 chr20 35269725 35269835 -36884047 - MER5A DNA MER1_type -6 183 77 * 465 189 220 8 chr20 35269742 35269874 -36884008 + MER5A DNA MER1_type 28 187 -2 315 267 145 17 chr20 35270776 35270948 -36882934 + MIR3 SINE MIR 14 207 -1 2486 54 41 0 chr20 35271041 35271335 -36882547 + AluY SINE Alu 1 306 -5 2490 95 0 3 chr20 35272382 35272688 -36881194 + AluSx SINE Alu 1 305 -7 2296 74 7 29 chr20 35272688 35272997 -36880885 + AluY SINE Alu 1 302 -9 1786 102 140 19 chr20 35273397 35273661 -36880221 + AluSx SINE Alu 1 296 -16 2060 103 3 67 chr20 35275231 35275543 -36878339 - AluSx SINE Alu -19 293 2 1337 163 41 13 chr20 35275593 35276090 -36877792 + MLT1F1 LTR MaLR 11 542 0 541 236 14 35 chr20 35276119 35276267 -36877615 - MIR3 SINE MIR -35 173 28 182 273 20 81 chr20 35276477 35276576 -36877306 - MIR SINE MIR -46 216 124 246 299 168 22 chr20 35276797 35276934 -36876948 + MIR SINE MIR 30 186 -76 2289 96 3 7 chr20 35277724 35278017 -36875865 - AluSx SINE Alu -20 292 1 1861 140 0 8 chr20 35278138 35278402 -36875480 + AluSx SINE Alu 45 306 -6 349 254 61 18 chr20 35278402 35278516 -36875366 + Charlie8 DNA MER1_type 84 202 -2215 518 238 94 19 chr20 35278614 35278774 -36875108 - MIR SINE MIR -77 185 14 2410 82 0 19 chr20 35279373 35279688 -36874194 + AluY SINE Alu 1 309 -2 629 293 60 5 chr20 35279806 35280021 -36873861 - MIR SINE MIR -31 231 5 316 235 0 92 chr20 35280062 35280106 -36873776 - MER5B DNA MER1_type -22 156 124 2481 71 3 7 chr20 35280106 35280415 -36873467 + AluSp SINE Alu 1 308 -5 316 235 0 92 chr20 35280415 35280468 -36873414 - MER5B DNA MER1_type -54 124 68 2412 98 0 3 chr20 35280942 35281247 -36872635 - AluSx SINE Alu -8 304 1 1716 160 59 14 chr20 35281955 35282242 -36871640 + AluJo SINE Alu 1 300 -12 266 306 52 0 chr20 35282250 35282384 -36871498 - L1ME LINE L1 -439 5682 5542 2364 89 0 37 chr20 35282547 35282726 -36871156 - AluSx SINE Alu 0 312 128 2328 109 0 3 chr20 35282726 35283028 -36870854 - AluSg SINE Alu -9 301 1 2399 95 0 7 chr20 35283028 35283333 -36870549 - AluSq SINE Alu -10 303 1 2364 89 0 37 chr20 35283333 35283476 -36870406 - AluSx SINE Alu -182 130 1 241 276 50 55 chr20 35283528 35283709 -36870173 + L2 LINE L2 2565 2744 -570 346 261 75 44 chr20 35285355 35285681 -36868201 + L2 LINE L2 2643 2984 -329 731 162 28 7 chr20 35286198 35286340 -36867542 + MIR SINE MIR 13 157 -105 298 350 32 0 chr20 35286613 35286736 -36867146 - MIR SINE MIR -6 256 130 551 136 0 0 chr20 35286953 35287041 -36866841 + AluSg/x SINE Alu 217 304 -5 1288 266 94 46 chr20 35287878 35288461 -36865421 - L2 LINE L2 -582 2732 2122 301 274 29 0 chr20 35288554 35288656 -36865226 + MLT1K LTR MaLR 151 255 -333 388 287 77 46 chr20 35289424 35289619 -36864263 + L2 LINE L2 547 747 -2567 338 311 133 37 chr20 35290502 35290837 -36863045 + L2 LINE L2 770 1072 -2242 207 0 0 0 chr20 35290837 35290860 -36863022 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2114 107 0 21 chr20 35290860 35291151 -36862731 - AluSg SINE Alu -25 285 1 338 311 133 37 chr20 35291151 35291413 -36862469 + L2 LINE L2 1071 1520 -1794 2440 88 0 0 chr20 35291416 35291711 -36862171 + AluSx SINE Alu 5 299 -13 7441 71 4 24 chr20 35291725 35292753 -36861129 + LTR13 LTR ERVK 1 1007 0 1437 246 166 51 chr20 35292811 35293457 -36860425 + L2 LINE L2 1867 2668 -646 2249 112 7 3 chr20 35293457 35293762 -36860120 + AluSx SINE Alu 1 306 -6 1437 246 166 51 chr20 35293762 35294110 -36859772 + L2 LINE L2 2668 2975 -339 234 186 0 0 chr20 35294111 35294154 -36859728 + L2 LINE L2 3251 3293 -20 220 261 257 22 chr20 35294231 35294453 -36859429 - L2 LINE L2 -527 2787 2514 221 280 93 37 chr20 35294642 35294749 -36859133 - MIR3 SINE MIR -48 160 48 226 229 0 0 chr20 35295041 35295089 -36858793 + MIR SINE MIR 106 153 -109 215 260 208 0 chr20 35295277 35295354 -36858528 + MIR SINE MIR 58 150 -112 2218 131 0 0 chr20 35295550 35295856 -36858026 - AluSx SINE Alu -6 306 1 384 262 205 19 chr20 35295950 35296160 -36857722 + MIR SINE MIR 10 258 -4 21 36 0 0 chr20 35296556 35296584 -36857298 + GC_rich Low_complexity Low_complexity 1 28 0 321 185 23 0 chr20 35297178 35297257 -36856625 + MIR SINE MIR 100 181 -63 1990 118 3 20 chr20 35297267 35297571 -36856311 + AluJo SINE Alu 1 299 -13 234 261 84 8 chr20 35297690 35297809 -36856073 - L1ME3A LINE L1 -209 5961 5834 966 167 29 29 chr20 35297832 35298042 -36855840 + MER2 DNA MER2_type 1 210 -135 1205 99 19 0 chr20 35298081 35298242 -36855640 - AluSg/x SINE Alu -15 297 134 2407 83 3 0 chr20 35298242 35298543 -36855339 - AluSp SINE Alu -11 302 1 942 244 99 78 chr20 35298553 35298590 -36855292 + Charlie7 DNA MER1_type 98 133 -2479 2322 67 3 32 chr20 35298590 35298905 -36854977 + AluY SINE Alu 1 306 -5 942 244 99 78 chr20 35298905 35299356 -36854526 + Charlie7 DNA MER1_type 133 602 -2010 2220 123 10 0 chr20 35299356 35299664 -36854218 + AluSx SINE Alu 1 311 -1 942 244 99 78 chr20 35299664 35299749 -36854133 + Charlie7 DNA MER1_type 602 684 -1928 2197 126 0 3 chr20 35299923 35300224 -36853658 - AluSx SINE Alu -12 300 1 2615 153 22 36 chr20 35300228 35300663 -36853219 + L1MD1 LINE L1 5748 6188 -54 1499 144 121 12 chr20 35300663 35300919 -36852963 - AluSx SINE Alu -2 310 27 * 2313 110 10 0 chr20 35300917 35301227 -36852655 - AluSp SINE Alu 0 313 1 2615 153 22 36 chr20 35301227 35301288 -36852594 + L1MD1 LINE L1 6496 6236 -6 2759 127 11 5 chr20 35301354 35301803 -36852079 - L1PA13 LINE L1 -5 6158 5707 2089 139 3 0 chr20 35301824 35302118 -36851764 + AluSx SINE Alu 1 295 -17 2356 97 0 0 chr20 35302211 35302509 -36851373 - AluSx SINE Alu -14 298 1 2382 115 0 0 chr20 35302511 35302815 -36851067 - AluSx SINE Alu -8 304 1 372 235 87 0 chr20 35302815 35302930 -36850952 - L1M4 LINE L1 -3620 2526 2402 547 205 55 47 chr20 35302943 35303070 -36850812 + FLAM_A SINE Alu 1 128 -5 1928 106 73 4 chr20 35303073 35303348 -36850534 + AluSq SINE Alu 1 294 -19 528 130 9 19 chr20 35303409 35303517 -36850365 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 317 145 0 16 chr20 35303533 35303595 -36850287 - L1MDa LINE L1 -5884 656 596 2306 88 0 24 chr20 35303617 35303914 -36849968 - AluSg SINE Alu -20 290 1 865 249 170 38 chr20 35303937 35304302 -36849580 + L1MC4a LINE L1 5453 5865 -1943 301 70 18 105 chr20 35304338 35304395 -36849487 + Alu SINE Alu 238 289 -13 2158 103 21 0 chr20 35304399 35304716 -36849166 + AluSx SINE Alu 1 323 0 320 293 61 18 chr20 35304717 35304881 -36849001 + L1MC4a LINE L1 5862 6032 -1776 369 260 91 32 chr20 35305653 35305807 -36848075 + L2 LINE L2 3151 3313 0 182 245 157 49 chr20 35306477 35306579 -36847303 - MIR SINE MIR -80 182 70 1632 177 10 30 chr20 35306632 35306932 -36846950 - AluJo SINE Alu -7 305 12 375 200 328 0 chr20 35307073 35307198 -36846684 - MIR SINE MIR -90 172 7 252 197 99 14 chr20 35307255 35307326 -36846556 - L2 LINE L2 -50 3263 3187 350 300 6 22 chr20 35307343 35307447 -36846435 + (CATA)n Simple_repeat Simple_repeat 2 103 -75 2027 108 7 14 chr20 35307447 35307734 -36846148 + AluSx SINE Alu 1 285 -27 350 300 6 22 chr20 35307734 35307809 -36846073 + (CATA)n Simple_repeat Simple_repeat 103 178 0 912 129 0 0 chr20 35307875 35307999 -36845883 - FLAM_C SINE Alu -19 124 1 228 308 165 59 chr20 35308109 35308430 -36845452 - L2 LINE L2 -1 3271 2917 2268 118 0 0 chr20 35308442 35308747 -36845135 + AluSx SINE Alu 1 305 -7 330 314 58 35 chr20 35308747 35308913 -36844969 + Charlie8 DNA MER1_type 102 271 -2146 1762 207 57 39 chr20 35309301 35309760 -36844122 + MLT1C LTR MaLR 1 467 0 195 187 121 88 chr20 35310530 35310621 -36843261 - MIR SINE MIR -65 143 50 1062 217 118 69 chr20 35310804 35310856 -36843026 - MLT1G1 LTR MaLR -5 590 542 2015 114 44 0 chr20 35310856 35311159 -36842723 - AluSg1 SINE Alu 0 315 1 1062 217 118 69 chr20 35311159 35311570 -36842312 - MLT1G1 LTR MaLR -53 542 102 2353 143 23 30 chr20 35311573 35311642 -36842240 - MSTB1 LTR MaLR 0 432 364 2071 210 38 73 chr20 35311642 35312276 -36841606 - LTR9 LTR ERV1 0 612 1 2353 143 23 30 chr20 35312276 35312641 -36841241 - MSTB1 LTR MaLR -68 364 1 1402 211 34 34 chr20 35312694 35312992 -36840890 + AluJb SINE Alu 1 298 -14 2158 107 0 43 chr20 35312996 35313132 -36840750 + AluSx SINE Alu 10 150 -162 2477 74 0 0 chr20 35313132 35313429 -36840453 + AluY SINE Alu 1 297 -14 2158 107 0 43 chr20 35313429 35313591 -36840291 + AluSx SINE Alu 150 295 -17 488 212 176 30 chr20 35313593 35313758 -36840124 - MER4C LTR ERV1 0 465 277 1912 84 69 158 chr20 35313778 35314240 -36839642 - MER4A LTR ERV1 -243 421 1 284 193 53 0 chr20 35314240 35314297 -36839585 - MLT1G1 LTR MaLR -535 60 1 468 294 200 0 chr20 35314302 35314462 -36839420 + MIR SINE MIR 19 210 -52 3849 93 16 40 chr20 35314757 35314858 -36839024 + MER41A LTR ERV1 1 103 -451 2264 102 3 10 chr20 35314858 35315163 -36838719 - AluSq SINE Alu -3 310 8 3849 93 16 40 chr20 35315163 35315629 -36838253 + MER41A LTR ERV1 103 554 0 1827 143 79 54 chr20 35316176 35316465 -36837417 + MER57A LTR ERV1 3 306 -97 3615 139 48 11 chr20 35316465 35316954 -36836928 + MER41B LTR ERV1 3 520 -115 2202 115 3 6 chr20 35316954 35317266 -36836616 - AluY SINE Alu 0 311 1 3615 139 48 11 chr20 35317266 35317387 -36836495 + MER41B LTR ERV1 520 635 0 1827 143 79 54 chr20 35317387 35317488 -36836394 + MER57A LTR ERV1 306 403 0 249 234 255 11 chr20 35317488 35317582 -36836300 - L2 LINE L2 -32 3281 3165 193 232 21 0 chr20 35317643 35317738 -36836144 + (TA)n Simple_repeat Simple_repeat 2 98 0 1899 156 7 3 chr20 35317747 35318036 -36835846 + AluJo SINE Alu 10 299 -13 602 306 142 4 chr20 35318047 35318374 -36835508 - L2 LINE L2 -150 3163 2794 245 214 27 143 chr20 35318414 35318526 -36835356 + L1M LINE L1 5274 5372 -792 1097 165 14 28 chr20 35318617 35318829 -36835053 + AluJb SINE Alu 104 312 0 2316 120 0 0 chr20 35318833 35319142 -36834740 - AluSx SINE Alu -3 309 1 235 302 0 0 chr20 35319320 35319383 -36834499 + L2 LINE L2 755 817 -2497 684 283 52 28 chr20 35319395 35319685 -36834197 - MLT1L LTR MaLR -6 609 313 2491 78 7 0 chr20 35319745 35320053 -36833829 + AluY SINE Alu 1 310 -1 2419 98 3 0 chr20 35320135 35320441 -36833441 + AluSx SINE Alu 1 307 -5 281 231 0 0 chr20 35320479 35320531 -36833351 - MLT1J LTR MaLR -103 408 357 873 148 7 14 chr20 35320540 35320682 -36833200 + AluJ SINE Alu 2 142 -170 1927 149 0 49 chr20 35320682 35320829 -36833053 + AluSx SINE Alu 1 127 -185 7265 47 8 3 chr20 35320829 35322299 -36831583 + L1PA6 LINE L1 4674 6148 -6 1927 149 0 49 chr20 35322299 35322459 -36831423 + AluSx SINE Alu 127 293 -19 810 166 22 7 chr20 35322920 35323059 -36830823 + AluJ SINE Alu 120 260 -52 267 291 163 0 chr20 35323259 35323400 -36830482 - MIR SINE MIR -2 260 97 1530 163 80 28 chr20 35323425 35323714 -36830168 + AluJo SINE Alu 1 304 -8 704 95 0 0 chr20 35323827 35323932 -36829950 - AluSg/x SINE Alu -1 311 207 688 185 58 29 chr20 35324023 35324188 -36829694 + MER21B LTR ERV1 127 299 -564 2499 85 0 0 chr20 35324188 35324493 -36829389 - AluSg SINE Alu -5 305 1 2235 119 0 0 chr20 35324563 35324857 -36829025 + AluSx SINE Alu 1 294 -18 669 212 0 36 chr20 35324897 35325034 -36828848 + FLAM_C SINE Alu 2 133 0 1724 167 3 36 chr20 35325041 35325347 -36828535 + AluJb SINE Alu 1 296 -16 21 0 0 0 chr20 35325347 35325368 -36828514 + AT_rich Low_complexity Low_complexity 1 21 0 2192 186 53 16 chr20 35325518 35326091 -36827791 + LTR27 LTR ERV1 2 661 -141 1606 192 21 39 chr20 35326072 35326410 -36827472 + LTR28 LTR ERV1 689 1020 0 * 1841 149 9 44 chr20 35326468 35326784 -36827098 + AluJb SINE Alu 1 305 -7 626 237 75 27 chr20 35326823 35327009 -36826873 + MIR SINE MIR 60 254 -8 2300 85 7 0 chr20 35327076 35327380 -36826502 + AluSp SINE Alu 2 307 0 516 206 100 0 chr20 35327781 35327825 -36826057 - MER104 DNA MER2_type -1721 177 139 2246 88 3 26 chr20 35327825 35328131 -36825751 - AluSg SINE Alu -11 299 1 516 206 100 0 chr20 35328131 35328246 -36825636 - MER104 DNA MER2_type -1759 139 2 501 281 38 19 chr20 35328741 35328901 -36824981 - MIR3 SINE MIR -4 204 42 2365 103 3 0 chr20 35328996 35329298 -36824584 + AluSx SINE Alu 1 303 -9 539 261 68 68 chr20 35329476 35329545 -36824337 + MIR SINE MIR 43 111 -151 1656 209 123 84 chr20 35329545 35329656 -36824226 + MLT1F LTR MaLR 2 107 -435 1523 166 59 45 chr20 35329656 35329946 -36823936 + AluJo SINE Alu 1 294 -18 2399 101 0 0 chr20 35329947 35330254 -36823628 + AluSg SINE Alu 1 307 -3 1656 209 123 84 chr20 35330254 35330661 -36823221 + MLT1F LTR MaLR 106 542 0 539 261 68 68 chr20 35330661 35330760 -36823122 + MIR SINE MIR 111 214 -48 2260 132 0 0 chr20 35330760 35331070 -36822812 + AluJb SINE Alu 1 310 -2 539 261 68 68 chr20 35331070 35331107 -36822775 + MIR SINE MIR 213 249 -13 370 303 40 53 chr20 35331527 35331549 -36822333 + MIR SINE MIR 51 72 -190 1692 167 30 20 chr20 35331549 35331848 -36822034 + AluSx SINE Alu 1 302 -10 370 303 40 53 chr20 35331848 35331977 -36821905 + MIR SINE MIR 72 200 -62 2261 120 0 0 chr20 35332149 35332448 -36821434 - AluSx SINE Alu -13 299 1 2141 131 0 13 chr20 35332461 35332775 -36821107 - AluSx SINE Alu -1 311 2 2516 73 3 0 chr20 35332799 35333100 -36820782 - AluSp SINE Alu -11 302 1 665 172 0 16 chr20 35333216 35333232 -36820650 - FRAM SINE Alu -136 40 25 2350 80 30 0 chr20 35333232 35333534 -36820348 - AluY SINE Alu 0 311 1 665 172 0 16 chr20 35333534 35333639 -36820243 - FRAM SINE Alu -151 25 1 464 117 0 13 chr20 35333639 35333711 -36820171 + Alu SINE Alu 237 307 -3 644 236 59 32 chr20 35333727 35333947 -36819935 + LTR67 LTR ERVL 332 557 0 27 49 0 0 chr20 35333982 35334023 -36819859 + AT_rich Low_complexity Low_complexity 1 41 0 589 232 38 108 chr20 35334190 35334309 -36819573 - L1ME3 LINE L1 -1 6161 6035 2160 134 0 3 chr20 35334309 35334614 -36819268 + AluSq SINE Alu 2 305 -8 589 232 38 108 chr20 35334614 35334721 -36819161 - L1ME3 LINE L1 -127 6035 5922 2155 120 6 25 chr20 35334721 35335037 -36818845 - AluSx SINE Alu -2 310 1 589 232 38 108 chr20 35335037 35335072 -36818810 - L1ME3 LINE L1 -240 5922 5886 1688 165 3 44 chr20 35335072 35335388 -36818494 + AluJo SINE Alu 1 303 -9 589 232 38 108 chr20 35335388 35335494 -36818388 - L1ME3 LINE L1 -276 5886 5818 2255 102 0 28 chr20 35335496 35335818 -36818064 - AluSq SINE Alu 0 313 1 2110 110 0 0 chr20 35335848 35336166 -36817716 - AluSx SINE Alu 0 328 11 1759 140 19 48 chr20 35336171 35336485 -36817397 - AluJo SINE Alu -7 305 1 2393 66 0 47 chr20 35336486 35336803 -36817079 - AluY SINE Alu -9 302 1 2077 144 0 0 chr20 35336856 35337155 -36816727 - AluSg SINE Alu -11 299 1 370 210 0 0 chr20 35337155 35337236 -36816646 - AluJo/FLAM SINE Alu -170 132 52 1607 159 17 23 chr20 35337261 35337562 -36816320 + MER61C LTR ERV1 136 434 0 247 245 0 0 chr20 35337562 35337611 -36816271 - Alu SINE Alu -116 187 139 445 279 76 5 chr20 35337620 35337817 -36816065 - L1MC4a LINE L1 -1979 5829 5619 300 53 0 0 chr20 35337831 35337869 -36816013 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 1972 160 0 3 chr20 35337909 35338209 -36815673 - AluJo SINE Alu -13 299 1 1984 90 21 14 chr20 35338232 35338543 -36815339 - AluSg SINE Alu 0 313 1 414 170 20 20 chr20 35338549 35338649 -36815233 - L1MB7 LINE L1 -11 6173 6074 2278 203 68 77 chr20 35338687 35339214 -36814668 - MER21B LTR ERV1 -52 811 290 2059 143 0 3 chr20 35339214 35339507 -36814375 + AluSx SINE Alu 1 292 -20 2278 203 68 77 chr20 35339507 35339670 -36814212 - MER21B LTR ERV1 -573 290 127 2017 114 0 60 chr20 35339702 35340019 -36813863 + AluSc SINE Alu 2 299 -10 2264 109 0 3 chr20 35340146 35340439 -36813443 - AluSg SINE Alu -18 292 1 965 134 8 0 chr20 35340508 35340642 -36813240 + AluSq/x SINE Alu 1 135 -178 2219 113 7 0 chr20 35340642 35340934 -36812948 + AluSg SINE Alu 2 295 -15 2249 84 14 0 chr20 35340936 35341222 -36812660 + AluSg SINE Alu 1 290 -20 559 192 16 8 chr20 35341421 35341546 -36812336 - L1M4 LINE L1 -960 5186 5061 1822 191 3 0 chr20 35341546 35341855 -36812027 - AluJo SINE Alu -2 310 1 275 228 98 82 chr20 35341862 35342046 -36811836 - L1MC4a LINE L1 -513 5608 5422 394 197 149 64 chr20 35342180 35342264 -36811618 + L1MC5 LINE L1 7724 7799 -162 2122 116 14 0 chr20 35342264 35342557 -36811325 - AluSx SINE Alu -15 297 1 702 208 0 8 chr20 35342557 35342682 -36811200 - AluJo/FLAM SINE Alu -178 124 1 394 197 149 64 chr20 35342682 35342784 -36811098 + L1MC5 LINE L1 7798 7927 -34 872 133 7 22 chr20 35342792 35342927 -36810955 + AluJo/FLAM SINE Alu 1 133 -169 2292 113 0 3 chr20 35342930 35343230 -36810652 - AluSq SINE Alu -13 300 2 369 333 57 0 chr20 35343319 35343442 -36810440 + MIR SINE MIR 12 141 -121 1911 239 63 31 chr20 35343455 35344040 -36809842 - LTR31 LTR ERV1 -15 604 1 2680 58 0 0 chr20 35344063 35344374 -36809508 - AluY SINE Alu 0 311 1 2259 114 3 0 chr20 35344724 35345014 -36808868 - AluSg SINE Alu -17 293 3 2302 117 16 0 chr20 35345019 35345326 -36808556 - AluSx SINE Alu 0 312 1 452 305 112 16 chr20 35345445 35345632 -36808250 + MIR SINE MIR 47 251 -11 2352 88 3 0 chr20 35345769 35346063 -36807819 + AluSp SINE Alu 3 297 -16 234 250 200 0 chr20 35346159 35346239 -36807643 - MIR SINE MIR -62 146 51 2257 118 0 0 chr20 35346391 35346687 -36807195 - AluSx SINE Alu -16 296 1 802 198 116 34 chr20 35346687 35346894 -36806988 - AluJo SINE Alu -2 310 87 416 257 7 19 chr20 35346935 35347085 -36806797 - L1MC4 LINE L1 -4 8038 7782 2060 140 0 0 chr20 35347101 35347393 -36806489 - AluSx SINE Alu -20 292 1 915 201 0 33 chr20 35347395 35347555 -36806327 - AluJb SINE Alu -16 296 141 2078 93 93 0 chr20 35347555 35347834 -36806048 - AluSg SINE Alu -5 305 1 915 201 0 33 chr20 35347834 35347857 -36806025 - AluJb SINE Alu -171 141 119 2206 116 0 7 chr20 35347953 35348255 -36805627 - AluSx SINE Alu -12 300 1 2031 126 0 33 chr20 35348263 35348591 -36805291 - AluSx SINE Alu 0 312 1 1034 145 11 0 chr20 35348685 35348871 -36805011 - MER53 DNA DNA 0 189 2 214 206 73 0 chr20 35349526 35349594 -36804288 - MIR SINE MIR -77 185 113 678 177 45 91 chr20 35349782 35349858 -36804024 + MER5A DNA MER1_type 1 79 -110 2421 77 0 3 chr20 35349858 35350156 -36803726 + AluSq SINE Alu 6 302 -11 678 177 45 91 chr20 35350156 35350277 -36803605 + MER5A DNA MER1_type 79 189 0 2655 61 0 3 chr20 35350301 35350613 -36803269 - AluY SINE Alu 0 311 1 667 202 0 0 chr20 35350668 35350787 -36803095 - FLAM_C SINE Alu -14 119 1 1508 97 0 10 chr20 35350813 35351008 -36802874 + AluSq SINE Alu 1 193 -120 476 108 0 0 chr20 35351008 35351073 -36802809 + AluJ/FRAM SINE Alu 230 294 -18 674 154 89 0 chr20 35351083 35351206 -36802676 + FRAM SINE Alu 42 175 -1 966 222 41 33 chr20 35351223 35351319 -36802563 - L1ME3A LINE L1 -4 6166 6072 3926 107 34 54 chr20 35351319 35351423 -36802459 + MER41B LTR ERV1 1 106 -529 2073 109 4 0 chr20 35351423 35351697 -36802185 - AluSg SINE Alu -20 290 16 3926 107 34 54 chr20 35351697 35352097 -36801785 + MER41B LTR ERV1 106 512 -123 2124 130 0 9 chr20 35352097 35352412 -36801470 - AluSx SINE Alu 0 312 1 2288 92 0 35 chr20 35352420 35352737 -36801145 - AluSg SINE Alu -4 306 1 3926 107 34 54 chr20 35352737 35352765 -36801117 + MER41B LTR ERV1 519 546 -89 2250 119 0 0 chr20 35352765 35353067 -36800815 + AluSq SINE Alu 1 302 -11 3926 107 34 54 chr20 35353067 35353171 -36800711 + MER41B LTR ERV1 546 635 0 966 222 41 33 chr20 35353171 35353317 -36800565 - L1ME3A LINE L1 -98 6072 5922 335 272 88 24 chr20 35353335 35353460 -36800422 + MIR SINE MIR 22 154 -108 2269 96 3 0 chr20 35353469 35353762 -36800120 + AluSg SINE Alu 1 294 -16 626 229 8 0 chr20 35353762 35353884 -36799998 + MER5A DNA MER1_type 67 189 0 223 196 0 39 chr20 35353890 35353941 -36799941 + MER5A DNA MER1_type 103 151 -38 1726 127 11 45 chr20 35354020 35354188 -36799694 - AluSx SINE Alu -16 296 139 2338 83 3 0 chr20 35354188 35354478 -36799404 - AluSg SINE Alu -19 291 1 1726 127 11 45 chr20 35354478 35354577 -36799305 - AluSx SINE Alu -173 139 38 1142 116 0 0 chr20 35354577 35354724 -36799158 - AluSq/x SINE Alu -166 147 1 1786 121 0 109 chr20 35354732 35354954 -36798928 - AluSx SINE Alu 0 302 128 1522 90 0 20 chr20 35354954 35355155 -36798727 + AluSg/x SINE Alu 109 305 -7 1786 121 0 109 chr20 35355155 35355271 -36798611 - AluSx SINE Alu -174 128 1 1427 145 13 4 chr20 35355272 35355506 -36798376 + AluJo SINE Alu 68 303 -9 271 220 35 11 chr20 35355670 35355821 -36798061 + MIR SINE MIR 16 218 -44 199 349 0 0 chr20 35355863 35355929 -36797953 - MIR SINE MIR -167 95 30 1575 135 6 132 chr20 35355997 35356353 -36797529 + AluJo SINE Alu 1 311 -1 803 196 42 53 chr20 35356399 35356588 -36797294 + MER5A DNA MER1_type 1 187 -2 34 0 0 0 chr20 35357269 35357303 -36796579 + GC_rich Low_complexity Low_complexity 1 34 0 2336 63 0 50 chr20 35358150 35358467 -36795415 + AluSg SINE Alu 1 301 -9 2080 125 0 3 chr20 35358477 35358774 -36795108 + AluJb SINE Alu 5 300 -12 2033 118 3 10 chr20 35358974 35359270 -36794612 - AluSg SINE Alu -16 294 1 336 281 144 13 chr20 35359313 35359466 -36794416 - MER5A DNA MER1_type 0 189 17 1308 186 84 14 chr20 35359806 35360081 -36793801 - AluJb SINE Alu -18 294 1 880 160 0 14 chr20 35360140 35360284 -36793598 + FLAM_C SINE Alu 1 142 -1 991 128 0 87 chr20 35360746 35360918 -36792964 - AluSg/x SINE Alu -25 287 131 182 319 0 0 chr20 35361010 35361057 -36792825 - L3 LINE CR1 -7 1570 1524 401 249 119 40 chr20 35361059 35361236 -36792646 + MER117 DNA MER1_type 6 196 -1 2309 90 3 10 chr20 35361544 35361845 -36792037 + AluSc SINE Alu 1 299 -10 202 339 0 0 chr20 35361987 35362049 -36791833 + L2 LINE L2 3201 3262 -10 2225 105 3 16 chr20 35362603 35362908 -36790974 + AluSg SINE Alu 1 301 -9 1890 159 7 7 chr20 35363377 35363678 -36790204 + AluJb SINE Alu 1 301 -11 540 292 14 25 chr20 35363678 35363902 -36789980 + MIR SINE MIR 3 219 -43 2154 139 0 13 chr20 35363933 35364242 -36789640 + AluSx SINE Alu 1 305 -7 2653 47 0 0 chr20 35364442 35364742 -36789140 + AluY SINE Alu 1 300 -11 450 91 0 0 chr20 35364762 35364828 -36789054 + L1M2 LINE L1 5602 5667 -645 2047 110 29 26 chr20 35364829 35365139 -36788743 - AluSx SINE Alu -1 311 1 36 53 0 0 chr20 35365207 35365264 -36788618 + AT_rich Low_complexity Low_complexity 1 57 0 365 285 48 30 chr20 35365331 35365496 -36788386 + MIR3 SINE MIR 40 207 -1 2457 56 3 26 chr20 35365580 35365884 -36787998 + AluY SINE Alu 1 297 -14 2389 88 0 0 chr20 35365940 35366235 -36787647 - AluY SINE Alu -16 295 1 2041 145 7 0 chr20 35366531 35366828 -36787054 - AluSq SINE Alu -14 299 1 2075 115 7 0 chr20 35366835 35367113 -36786769 - AluSx SINE Alu -14 298 19 1576 110 5 5 chr20 35367437 35367656 -36786226 - AluSc SINE Alu -8 301 83 22 0 0 0 chr20 35367658 35367680 -36786202 + AT_rich Low_complexity Low_complexity 1 22 0 460 307 54 0 chr20 35367848 35368014 -36785868 + MIR SINE MIR 5 179 -83 253 333 44 26 chr20 35368155 35368269 -36785613 - MER102a DNA MER1_type -6 324 209 2376 81 0 23 chr20 35368288 35368595 -36785287 - AluSq SINE Alu -12 301 2 2367 94 3 0 chr20 35368599 35368896 -36784986 - AluSp SINE Alu -15 298 1 21 0 0 0 chr20 35368896 35368917 -36784965 + AT_rich Low_complexity Low_complexity 1 21 0 465 152 0 38 chr20 35368928 35369008 -36784874 + L1MA8 LINE L1 6165 6242 -49 779 154 8 0 chr20 35369008 35369125 -36784757 + FLAM_C SINE Alu 1 118 -15 465 152 0 38 chr20 35369125 35369149 -36784733 + L1MA8 LINE L1 6242 6265 -26 21 0 0 0 chr20 35369184 35369205 -36784677 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr20 35369252 35369287 -36784595 + (T)n Simple_repeat Simple_repeat 1 35 0 742 161 0 0 chr20 35369288 35369400 -36784482 + FLAM_C SINE Alu 3 114 -29 508 262 45 50 chr20 35369484 35369705 -36784177 - MER102a DNA MER1_type -110 220 1 823 127 59 149 chr20 35369784 35370036 -36783846 + AluJb SINE Alu 84 315 0 2005 133 3 3 chr20 35370647 35370941 -36782941 + AluSx SINE Alu 1 294 -18 1957 145 0 23 chr20 35371137 35371441 -36782441 + AluJb SINE Alu 1 297 -15 2247 88 6 25 chr20 35371744 35372062 -36781820 + AluSx SINE Alu 1 312 0 437 204 58 19 chr20 35372421 35372524 -36781358 - U6 snRNA snRNA 0 107 1 272 254 93 25 chr20 35372671 35372789 -36781093 - HAL1 LINE L1 -2364 143 18 2003 139 17 65 chr20 35372867 35373150 -36780732 - L1MB4 LINE L1 -1 6179 5884 2421 76 0 10 chr20 35373150 35373452 -36780430 - AluY SINE Alu -12 299 1 1940 94 91 4 chr20 35373462 35373727 -36780155 - AluSc SINE Alu -21 288 1 2003 139 17 65 chr20 35373727 35373848 -36780034 - L1MB4 LINE L1 -305 5875 5784 688 167 51 5 chr20 35374001 35374165 -36779717 - L1MB4 LINE L1 -827 5319 5175 727 131 22 51 chr20 35374168 35374305 -36779577 - FLAM_C SINE Alu 0 133 1 2026 149 0 7 chr20 35374344 35374640 -36779242 - AluSx SINE Alu -15 297 4 817 127 76 70 chr20 35374676 35374834 -36779048 + AluJo SINE Alu 3 161 -151 * 914 136 117 7 chr20 35374833 35374987 -36778895 - AluSc SINE Alu -7 302 132 2292 89 0 3 chr20 35374987 35375280 -36778602 - AluSg SINE Alu -17 293 2 869 160 0 14 chr20 35375293 35375437 -36778445 + AluJo SINE Alu 159 300 -12 2211 117 3 7 chr20 35375963 35376263 -36777619 - AluSx SINE Alu -13 299 1 2119 128 0 0 chr20 35376268 35376597 -36777285 - AluSg SINE Alu 0 310 1 1620 176 0 36 chr20 35376598 35376900 -36776982 - AluJo SINE Alu -16 296 6 2400 85 3 0 chr20 35376918 35377212 -36776670 - AluSp SINE Alu -9 304 10 744 167 0 16 chr20 35377248 35377374 -36776508 - AluJb SINE Alu -178 134 11 2121 131 3 10 chr20 35377389 35377701 -36776181 - AluSp SINE Alu -3 310 1 180 0 0 0 chr20 35377703 35377723 -36776159 + (T)n Simple_repeat Simple_repeat 1 20 0 726 41 0 31 chr20 35377724 35377821 -36776061 - HY3 scRNA scRNA -7 94 1 2269 109 0 0 chr20 35377832 35378134 -36775748 - AluSg1 SINE Alu -7 302 1 2435 73 0 7 chr20 35378214 35378517 -36775365 - AluY SINE Alu -10 301 1 1850 145 0 55 chr20 35378576 35378745 -36775137 - AluSx SINE Alu -18 294 148 288 0 0 0 chr20 35378745 35378777 -36775105 + (TG)n Simple_repeat Simple_repeat 1 32 0 1850 145 0 55 chr20 35378777 35378918 -36774964 - AluSx SINE Alu -164 148 1 844 178 47 24 chr20 35379653 35379846 -36774036 - AluSg/x SINE Alu 0 309 113 2112 117 10 10 chr20 35380576 35380875 -36773007 + AluSx SINE Alu 1 299 -13 1594 145 59 35 chr20 35380900 35381190 -36772692 + AluJo SINE Alu 1 297 -15 2222 121 0 3 chr20 35381260 35381558 -36772324 - AluSc SINE Alu -12 297 1 1276 189 0 5 chr20 35381656 35381873 -36772009 - AluJb SINE Alu -15 297 82 195 42 0 0 chr20 35381887 35381911 -36771971 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1091 192 0 10 chr20 35381930 35382138 -36771744 - AluJb SINE Alu -2 310 105 728 245 55 0 chr20 35382549 35382712 -36771170 + MER8 DNA MER2_type 1 172 -67 683 174 0 84 chr20 35382717 35382872 -36771010 - FLAM_C SINE Alu 0 143 2 437 198 0 12 chr20 35382873 35382954 -36770928 + MER8 DNA MER2_type 160 239 0 412 240 110 0 chr20 35383121 35383221 -36770661 - LTR47A LTR ERVL -65 387 277 1961 124 4 0 chr20 35383427 35383694 -36770188 + AluSx SINE Alu 34 301 -11 373 310 63 7 chr20 35383819 35383961 -36769921 - MIR SINE MIR -112 150 1 2314 118 3 0 chr20 35383999 35384305 -36769577 - AluSx SINE Alu -5 307 1 2178 103 31 3 chr20 35384316 35384608 -36769274 - AluSq SINE Alu -13 300 1 21 57 0 0 chr20 35385446 35385481 -36768401 + AT_rich Low_complexity Low_complexity 1 35 0 603 168 0 0 chr20 35386255 35386362 -36767520 - AluJo/FRAM SINE Alu 0 312 206 460 239 0 58 chr20 35386365 35386503 -36767379 + FLAM_A SINE Alu 4 133 0 678 185 39 56 chr20 35386568 35386746 -36767136 + LTR48B LTR ERV1 467 641 -3 1079 169 11 6 chr20 35386784 35386962 -36766920 + AluJo SINE Alu 1 179 -133 823 298 49 3 chr20 35386962 35387247 -36766635 - L2 LINE L2 -1119 2195 1898 1780 145 78 0 chr20 35387505 35387788 -36766094 + AluSx SINE Alu 1 305 -7 250 196 0 0 chr20 35387808 35387859 -36766023 + L2 LINE L2 3263 3313 0 315 137 0 0 chr20 35387974 35388025 -36765857 - L1MB8 LINE L1 -4 6174 6124 711 186 28 14 chr20 35388056 35388201 -36765681 - AluJo SINE Alu -128 184 38 1936 187 78 58 chr20 35388201 35388505 -36765377 - LTR48B LTR ERV1 -64 580 258 2436 87 0 3 chr20 35388505 35388804 -36765078 + AluSx SINE Alu 1 298 -14 1936 187 78 58 chr20 35388804 35389066 -36764816 - LTR48B LTR ERV1 -386 258 3 3549 144 42 95 chr20 35389067 35389591 -36764291 - L1MB7 LINE L1 -82 6102 5551 2248 110 0 0 chr20 35389591 35389883 -36763999 - AluSx SINE Alu -14 298 7 3549 144 42 95 chr20 35389883 35390064 -36763818 - L1MB7 LINE L1 -633 5551 5445 900 165 6 37 chr20 35390064 35390228 -36763654 - FRAM SINE Alu -7 159 1 3549 144 42 95 chr20 35390228 35390341 -36763541 - L1MB7 LINE L1 -739 5445 5327 2308 99 13 0 chr20 35390573 35390876 -36763006 - AluSg1 SINE Alu -2 307 1 1918 163 0 0 chr20 35391623 35391918 -36761964 - AluJo SINE Alu -17 295 1 2347 90 10 0 chr20 35391953 35392253 -36761629 - AluSq SINE Alu -10 303 1 22 56 0 0 chr20 35392265 35392301 -36761581 + AT_rich Low_complexity Low_complexity 1 36 0 2306 103 10 0 chr20 35392666 35392976 -36760906 + AluSp SINE Alu 1 313 0 1934 110 4 4 chr20 35393114 35393368 -36760514 + AluSx SINE Alu 1 254 -58 1080 169 20 88 chr20 35393368 35393497 -36760385 - AluJb SINE Alu -69 243 138 2217 125 0 0 chr20 35393497 35393792 -36760090 - AluSc SINE Alu -14 295 1 1080 169 20 88 chr20 35393792 35393911 -36759971 - AluJb SINE Alu -174 138 12 663 92 20 0 chr20 35394196 35394294 -36759588 - AluSg/x SINE Alu -5 304 205 307 248 0 7 chr20 35394296 35394317 -36759565 - AluJo SINE Alu -167 135 115 2006 145 0 3 chr20 35394317 35394614 -36759268 - AluSx SINE Alu -16 296 1 307 248 0 7 chr20 35394614 35394672 -36759210 - AluJo SINE Alu -187 115 78 309 389 83 10 chr20 35397352 35397719 -36756163 - L2 LINE L2 -286 2986 2596 185 258 42 108 chr20 35397924 35397971 -36755911 + MIR SINE MIR 80 129 -133 2060 131 24 0 chr20 35397971 35398268 -36755614 - AluSq SINE Alu -9 304 1 185 258 42 108 chr20 35398268 35398340 -36755542 + MIR SINE MIR 129 191 -71 1854 160 0 26 chr20 35398407 35398720 -36755162 + AluJb SINE Alu 1 305 -7 2254 111 0 3 chr20 35398778 35399076 -36754806 + AluSq SINE Alu 1 297 -16 826 109 0 17 chr20 35399336 35399455 -36754427 - FLAM_C SINE Alu -2 141 25 1925 134 0 27 chr20 35399580 35399879 -36754003 - AluJb SINE Alu -15 297 7 2582 57 0 0 chr20 35400088 35400389 -36753493 - AluY SINE Alu -10 301 1 2185 100 0 7 chr20 35400835 35401124 -36752758 - AluSx SINE Alu -25 287 1 363 283 97 38 chr20 35401232 35401500 -36752382 + L2 LINE L2 2949 3303 -10 718 210 0 0 chr20 35401521 35401645 -36752237 - FLAM_A SINE Alu -9 124 1 1341 195 43 4 chr20 35401673 35401929 -36751953 - AluJo SINE Alu -46 266 1 233 306 0 6 chr20 35402419 35402523 -36751359 + T-rich Low_complexity Low_complexity 1 156 0 1126 164 0 11 chr20 35402746 35402929 -36750953 - AluJo SINE Alu -10 302 122 496 184 0 88 chr20 35402958 35403072 -36750810 - FLAM_A SINE Alu -15 127 24 307 310 126 16 chr20 35403072 35403327 -36750555 - L1ME4a LINE L1 -210 5911 5629 27 0 0 0 chr20 35403396 35403423 -36750459 + AT_rich Low_complexity Low_complexity 1 27 0 917 213 0 44 chr20 35403439 35403622 -36750260 + FAM SINE Alu 1 175 0 2179 115 6 22 chr20 35403641 35403955 -36749927 + AluSq SINE Alu 1 309 -4 518 238 0 57 chr20 35404117 35404239 -36749643 + FLAM_A SINE Alu 1 115 -18 2033 97 0 8 chr20 35404741 35405009 -36748873 - AluSx SINE Alu -46 266 1 506 272 44 0 chr20 35405578 35405714 -36748168 + MIR SINE MIR 53 194 -68 242 209 122 43 chr20 35406430 35406569 -36747313 - L1ME4a LINE L1 -11 6110 5961 829 253 0 6 chr20 35406582 35406740 -36747142 - FAM SINE Alu -18 157 1 920 178 6 18 chr20 35407556 35407719 -36746163 + AluJb SINE Alu 141 301 -11 2380 87 0 40 chr20 35408013 35408335 -36745547 - AluSp SINE Alu -4 309 1 1860 146 7 7 chr20 35408831 35409125 -36744757 + AluJo SINE Alu 1 294 -18 2135 94 0 0 chr20 35409398 35409673 -36744209 + AluSg SINE Alu 2 276 -34 2412 83 3 0 chr20 35409673 35409972 -36743910 + AluSp SINE Alu 1 301 -12 293 182 0 0 chr20 35409972 35410027 -36743855 - MER44D DNA MER2_type -184 425 371 381 150 83 0 chr20 35410081 35410141 -36743741 - MER44D DNA MER2_type -238 371 37 1342 95 0 0 chr20 35410467 35410636 -36743246 - AluSq SINE Alu -15 298 130 2209 94 3 7 chr20 35410656 35410953 -36742929 - AluSp SINE Alu -17 296 1 2266 100 0 0 chr20 35410956 35411255 -36742627 - AluSq SINE Alu -14 299 1 207 0 0 0 chr20 35411259 35411282 -36742600 + (T)n Simple_repeat Simple_repeat 1 23 0 1821 162 7 0 chr20 35411523 35411820 -36742062 - AluJo SINE Alu -13 299 1 2344 102 3 6 chr20 35412304 35412618 -36741264 - AluSp SINE Alu 0 313 1 1193 128 23 55 chr20 35413041 35413260 -36740622 - AluSg/x SINE Alu -16 296 85 683 105 0 0 chr20 35413260 35413355 -36740527 - AluY SINE Alu -62 249 155 563 312 71 4 chr20 35413356 35413609 -36740273 - L1ME4a LINE L1 -307 5863 5594 2370 192 66 25 chr20 35413646 35414173 -36739709 - L1MB5 LINE L1 -2 6172 5624 528 265 157 7 chr20 35414181 35414475 -36739407 - L1MEd LINE L1 -5221 898 561 988 204 17 0 chr20 35414662 35414834 -36739048 - FAM SINE Alu 0 175 1 234 0 0 0 chr20 35415150 35415176 -36738706 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1472 175 14 40 chr20 35415283 35415580 -36738302 + AluJb SINE Alu 3 291 -21 732 242 128 9 chr20 35415639 35415858 -36738024 - MIR SINE MIR 0 262 18 1432 228 29 39 chr20 35416144 35416355 -36737527 - L1MB7 LINE L1 -9 6175 5968 2258 112 0 0 chr20 35416355 35416650 -36737232 - AluSx SINE Alu -17 295 1 1432 228 29 39 chr20 35416650 35416850 -36737032 - L1MB7 LINE L1 -216 5968 5768 2156 115 3 3 chr20 35417162 35417458 -36736424 - AluSq SINE Alu -17 296 1 4048 183 28 53 chr20 35418554 35419548 -36734334 + LTR5 LTR ERVK 1 969 0 283 204 143 10 chr20 35419878 35419976 -36733906 + L1MC5 LINE L1 7787 7897 -64 2000 142 9 25 chr20 35419989 35420306 -36733576 - AluSx SINE Alu 0 312 1 2071 143 0 0 chr20 35420322 35420629 -36733253 - AluY SINE Alu -4 307 1 1272 154 38 110 chr20 35420859 35421178 -36732704 + AluJb SINE Alu 1 296 -16 753 189 0 40 chr20 35422124 35422272 -36731610 - FLAM_C SINE Alu 0 143 2 2293 110 0 7 chr20 35422487 35422795 -36731087 - AluSx SINE Alu -6 306 1 23 54 0 0 chr20 35422912 35422949 -36730933 + AT_rich Low_complexity Low_complexity 1 37 0 203 162 0 0 chr20 35422975 35423012 -36730870 + MER5B DNA MER1_type 4 40 -138 * 583 184 10 0 chr20 35423008 35423106 -36730776 - MER5A DNA MER1_type -85 104 6 493 273 108 26 chr20 35423636 35423867 -36730015 - MIR SINE MIR -11 251 2 1990 112 3 18 chr20 35424023 35424333 -36729549 - AluSx SINE Alu 0 306 1 232 352 149 25 chr20 35424340 35424686 -36729196 - L2 LINE L2 -576 2738 2436 1774 164 7 10 chr20 35424686 35424985 -36728897 + AluJo SINE Alu 1 298 -14 232 352 149 25 chr20 35424985 35425308 -36728574 - L2 LINE L2 -878 2436 1986 2346 87 0 29 chr20 35425313 35425624 -36728258 + AluSx SINE Alu 1 302 -10 1753 186 0 6 chr20 35426228 35426540 -36727342 + AluSx SINE Alu 1 310 -2 2384 84 0 0 chr20 35426563 35426861 -36727021 + AluSq SINE Alu 1 298 -15 1576 142 91 4 chr20 35426954 35427228 -36726654 + AluJb SINE Alu 1 298 -14 21 0 0 0 chr20 35427481 35427502 -36726380 + AT_rich Low_complexity Low_complexity 1 21 0 1574 179 15 97 chr20 35427549 35427878 -36726004 + AluJb SINE Alu 1 302 0 2132 136 0 16 chr20 35428707 35429024 -36724858 - AluSx SINE Alu 0 312 1 224 385 0 26 chr20 35429854 35429932 -36723950 - MIR SINE MIR -117 91 16 365 314 154 6 chr20 35430181 35430337 -36723545 - MER5A DNA MER1_type -1 188 10 1913 152 0 7 chr20 35430406 35430708 -36723174 + AluSx SINE Alu 8 307 -5 425 151 70 12 chr20 35430708 35430788 -36723094 + L1MA9 LINE L1 6172 6256 -56 1719 181 0 3 chr20 35430863 35431161 -36722721 - AluJb SINE Alu -15 297 1 1685 153 14 14 chr20 35432828 35433122 -36720760 - AluJb SINE Alu -10 302 9 2059 102 25 7 chr20 35434010 35434293 -36719589 - AluSx SINE Alu -10 302 15 2370 87 0 3 chr20 35434543 35434843 -36719039 + AluSq SINE Alu 1 299 -14 1064 179 0 0 chr20 35434967 35435146 -36718736 - AluSg/x SINE Alu 0 310 132 2181 133 0 0 chr20 35435146 35435440 -36718442 - AluSx SINE Alu -18 294 1 905 159 0 0 chr20 35436075 35436207 -36717675 - FLAM_C SINE Alu -1 132 1 2377 73 0 10 chr20 35436246 35436546 -36717336 + AluY SINE Alu 1 297 -14 2183 84 18 0 chr20 35436786 35437070 -36716812 + AluSc SINE Alu 3 291 -18 1530 191 14 4 chr20 35437257 35437534 -36716348 + AluJo SINE Alu 1 280 -32 309 230 79 50 chr20 35437573 35437712 -36716170 + L1MD2 LINE L1 5610 5752 -369 2288 84 3 14 chr20 35437856 35438153 -36715729 + AluSp SINE Alu 1 294 -19 1900 146 3 10 chr20 35438197 35438498 -36715384 - AluSx SINE Alu -13 299 1 612 285 88 18 chr20 35440324 35440552 -36713330 + MIR SINE MIR 13 256 -6 21 0 0 0 chr20 35440726 35440747 -36713135 + AT_rich Low_complexity Low_complexity 1 21 0 608 234 162 40 chr20 35441463 35441662 -36712220 + L1MC5 LINE L1 7477 7650 -311 2364 75 0 16 chr20 35441662 35441968 -36711914 + AluSg SINE Alu 1 301 -9 608 234 162 40 chr20 35441968 35442119 -36711763 + L1MC5 LINE L1 7650 7870 -91 22 35 0 0 chr20 35442646 35442675 -36711207 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr20 35442741 35442767 -36711115 + AT_rich Low_complexity Low_complexity 1 26 0 1283 219 66 101 chr20 35443291 35443866 -36710016 + L1MD2 LINE L1 5804 6358 -1 2214 121 0 7 chr20 35444560 35444865 -36709017 + AluSx SINE Alu 1 303 -9 1010 177 0 0 chr20 35444865 35445029 -36708853 + AluJb SINE Alu 134 297 -15 1767 179 3 10 chr20 35445340 35445647 -36708235 + AluJb SINE Alu 1 305 -7 808 220 38 6 chr20 35446232 35446391 -36707491 - FAM SINE Alu -11 164 1 1683 157 64 4 chr20 35446893 35447174 -36706708 + AluJb SINE Alu 10 307 -5 2080 139 0 16 chr20 35447266 35447582 -36706300 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr20 35447595 35447617 -36706265 + AT_rich Low_complexity Low_complexity 1 22 0 2739 20 0 0 chr20 35447690 35447991 -36705891 - AluY SINE Alu -10 301 1 2295 101 0 3 chr20 35448372 35448679 -36705203 - AluSq SINE Alu -1 312 7 1822 109 36 53 chr20 35449029 35449332 -36704550 - AluSx SINE Alu -14 298 1 296 200 13 0 chr20 35449694 35449769 -36704113 + (TA)n Simple_repeat Simple_repeat 1 76 0 928 135 0 0 chr20 35449769 35449902 -36703980 - AluJb SINE Alu -2 310 178 781 145 0 0 chr20 35450082 35450199 -36703683 + AluJb SINE Alu 178 294 -18 265 173 13 13 chr20 35450199 35450274 -36703608 + (TA)n Simple_repeat Simple_repeat 2 76 0 980 138 0 13 chr20 35450283 35450435 -36703447 - AluJb SINE Alu -161 151 2 344 282 130 23 chr20 35450500 35450631 -36703251 + MIR SINE MIR 47 191 -71 1505 175 46 23 chr20 35451231 35451534 -36702348 + AluJo SINE Alu 3 312 0 21 36 0 0 chr20 35451559 35451587 -36702295 + AT_rich Low_complexity Low_complexity 1 28 0 574 264 40 24 chr20 35451613 35451863 -36702019 + Charlie4 DNA MER1_type 1 254 -1707 566 138 0 0 chr20 35451912 35451999 -36701883 - FLAM_A SINE Alu -34 108 22 1787 191 103 19 chr20 35452065 35452494 -36701388 - MLT1C LTR MaLR -2 465 1 506 249 79 33 chr20 35452553 35452814 -36701068 - MER77 LTR ERV1 -4 601 408 481 221 152 125 chr20 35452859 35453148 -36700734 - MER77 LTR ERV1 -253 352 56 527 155 0 21 chr20 35453224 35453321 -36700561 + AluSg/x SINE Alu 217 311 -1 1262 132 10 29 chr20 35453734 35453964 -36699918 - AluJo SINE Alu 0 309 84 314 294 128 0 chr20 35454116 35454225 -36699657 - MIR SINE MIR -56 206 84 1605 192 3 14 chr20 35454292 35454584 -36699298 + AluJo SINE Alu 1 289 -23 2161 85 26 26 chr20 35454983 35455288 -36698594 + AluSg SINE Alu 1 305 -5 238 308 123 15 chr20 35455396 35455526 -36698356 - L2 LINE L2 -886 2428 2285 5038 186 55 67 chr20 35456170 35456635 -36697247 - L1MB3 LINE L1 -9 6174 5705 2257 100 0 0 chr20 35456635 35456924 -36696958 + AluSx SINE Alu 1 289 -23 5038 186 55 67 chr20 35456924 35456986 -36696896 - L1MB3 LINE L1 -478 5705 5644 216 0 0 0 chr20 35456986 35457010 -36696872 + (TTAGGG)n Simple_repeat Simple_repeat 2 25 0 5038 186 55 67 chr20 35457010 35457524 -36696358 - L1MB3 LINE L1 -539 5644 5125 2248 85 0 44 chr20 35457524 35457842 -36696040 - AluY SINE Alu -7 304 1 5038 186 55 67 chr20 35457842 35457859 -36696023 - L1MB3 LINE L1 -1058 5125 5109 2111 115 3 31 chr20 35457859 35458181 -36695701 - AluSp SINE Alu 0 313 1 5038 186 55 67 chr20 35458181 35458268 -36695614 - L1MB3 LINE L1 -1074 5109 5022 2104 118 0 7 chr20 35458268 35458564 -36695318 - AluSg SINE Alu -16 294 1 5038 186 55 67 chr20 35458564 35459937 -36693945 - L1MB3 LINE L1 -1161 5022 3689 288 229 10 31 chr20 35460121 35460217 -36693665 - MLT1J LTR MaLR -4 507 414 905 238 58 19 chr20 35460246 35460611 -36693271 + L1M4 LINE L1 2887 3265 -2881 1931 150 23 3 chr20 35460801 35461101 -36692781 + AluJb SINE Alu 1 306 -6 1613 86 5 0 chr20 35461227 35461436 -36692446 - AluSp SINE Alu 0 313 104 296 179 0 0 chr20 35461438 35461494 -36692388 + Alu SINE Alu 238 293 -7 1135 238 77 32 chr20 35461499 35461589 -36692293 + L1M4 LINE L1 3875 3959 -2187 2483 77 0 0 chr20 35461589 35461888 -36691994 - AluY SINE Alu -12 299 1 1135 238 77 32 chr20 35461888 35462063 -36691819 + L1M4 LINE L1 3959 4125 -2021 2290 113 0 0 chr20 35462063 35462374 -36691508 + AluSx SINE Alu 1 311 -1 1135 238 77 32 chr20 35462374 35462548 -36691334 + L1M4 LINE L1 4125 4335 -1811 438 270 110 105 chr20 35462596 35462777 -36691105 - MLT1J LTR MaLR -110 401 222 291 28 0 0 chr20 35462777 35462813 -36691069 + (CA)n Simple_repeat Simple_repeat 2 37 0 438 270 110 105 chr20 35462813 35462851 -36691031 - MLT1J LTR MaLR -289 222 186 2060 133 0 7 chr20 35462851 35463145 -36690737 - AluSx SINE Alu -20 292 1 438 270 110 105 chr20 35463145 35463316 -36690566 - MLT1J LTR MaLR -325 186 8 615 182 0 0 chr20 35463878 35463977 -36689905 + FLAM_C SINE Alu 24 122 -21 24 32 0 0 chr20 35463977 35464008 -36689874 + AT_rich Low_complexity Low_complexity 1 31 0 1784 179 27 0 chr20 35464140 35464437 -36689445 - AluJo SINE Alu -5 307 3 378 0 0 0 chr20 35465228 35465270 -36688612 + (TG)n Simple_repeat Simple_repeat 2 43 0 2141 102 43 23 chr20 35465649 35465952 -36687930 + AluSq SINE Alu 2 310 -3 192 347 53 0 chr20 35467443 35467518 -36686364 + MIR SINE MIR 38 116 -92 10695 36 3 103 chr20 35467718 35469256 -36684626 - SVA Other Other -1 1385 1 22 0 0 0 chr20 35469419 35469441 -36684441 + AT_rich Low_complexity Low_complexity 1 22 0 2112 117 13 0 chr20 35470803 35471103 -36682779 + AluSp SINE Alu 1 304 -9 26 50 0 0 chr20 35471117 35471157 -36682725 + AT_rich Low_complexity Low_complexity 1 40 0 334 249 236 18 chr20 35471572 35471737 -36682145 - MIR SINE MIR -10 252 52 301 267 253 7 chr20 35472058 35472204 -36681678 + MIR SINE MIR 7 188 -74 21 57 0 0 chr20 35472304 35472339 -36681543 + AT_rich Low_complexity Low_complexity 1 35 0 247 188 31 0 chr20 35472833 35472897 -36680985 + HsTC2 DNA Tc2 3 68 -1830 2249 138 0 0 chr20 35473442 35473753 -36680129 - AluSx SINE Alu -1 311 1 2243 102 0 14 chr20 35473762 35474056 -36679826 - AluSp SINE Alu -23 290 1 1842 127 22 115 chr20 35475069 35475285 -36678597 - THE1B LTR MaLR 0 364 200 2214 117 0 0 chr20 35475285 35475576 -36678306 + AluSc SINE Alu 1 291 -18 1842 127 22 115 chr20 35475576 35475760 -36678122 - THE1B LTR MaLR -164 200 1 11229 96 5 14 chr20 35475760 35477355 -36676527 - THE1B-int LTR MaLR 0 1580 1 2151 110 25 25 chr20 35477355 35477709 -36676173 - THE1B LTR MaLR -10 354 1 275 190 89 0 chr20 35478253 35478332 -36675550 - L1ME2 LINE L1 -2 6231 6146 1873 194 141 28 chr20 35478518 35479171 -36674711 - L1ME2 LINE L1 -177 6054 5328 1274 183 8 32 chr20 35479248 35479494 -36674388 - AluJo SINE Alu -21 291 52 316 182 0 118 chr20 35479495 35479566 -36674316 - L1ME2 LINE L1 -3108 3107 3029 1531 204 3 29 chr20 35479566 35479874 -36674008 - AluJo SINE Alu -12 300 1 2203 123 0 0 chr20 35479880 35480180 -36673702 - AluSx SINE Alu -12 300 1 316 182 0 118 chr20 35480180 35480211 -36673671 - L1ME2 LINE L1 -3191 3024 3011 230 0 0 32 chr20 35480211 35480242 -36673640 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1530 168 58 17 chr20 35480245 35480536 -36673346 - AluJb SINE Alu -9 303 1 2251 94 7 3 chr20 35480567 35480866 -36673016 - AluY SINE Alu -11 300 1 1171 236 85 62 chr20 35480867 35481211 -36672671 - L1ME2 LINE L1 -4072 2324 1990 2298 113 0 0 chr20 35481211 35481511 -36672371 + AluSq SINE Alu 1 300 -13 1171 236 85 62 chr20 35481511 35481881 -36672001 - L1ME2 LINE L1 -4406 1990 1593 410 261 87 79 chr20 35481893 35481987 -36671895 + L1MC5 LINE L1 7666 7758 -203 2026 148 10 3 chr20 35481987 35482297 -36671585 + AluSx SINE Alu 1 312 0 410 261 87 79 chr20 35482297 35482320 -36671562 + L1MC5 LINE L1 7758 7779 -182 1591 198 0 3 chr20 35482320 35482608 -36671274 + AluJo SINE Alu 11 297 -15 410 261 87 79 chr20 35482608 35482742 -36671140 + L1MC5 LINE L1 7779 7920 -41 1094 200 113 40 chr20 35483863 35483943 -36669939 + L1MB4 LINE L1 5360 5433 -735 1837 117 98 0 chr20 35483943 35484208 -36669674 + AluSg SINE Alu 1 291 -19 1094 200 113 40 chr20 35484208 35484473 -36669409 + L1MB4 LINE L1 5433 5733 -435 368 198 70 0 chr20 35484485 35484571 -36669311 - Tigger5 DNA MER2_type 0 2323 2232 301 149 0 0 chr20 35484617 35484661 -36669221 - Tigger5 DNA MER2_type -2268 55 12 281 200 14 29 chr20 35484661 35484731 -36669151 - Tigger5 DNA MER2_type -1 2322 2254 1774 148 34 31 chr20 35484746 35485132 -36668750 + L1MB4 LINE L1 5794 6180 0 832 193 0 29 chr20 35485798 35485969 -36667913 + FRAM SINE Alu 1 160 -16 272 294 79 48 chr20 35486529 35486655 -36667227 + L2 LINE L2 3141 3270 -2 1960 142 7 3 chr20 35487503 35487798 -36666084 + AluSx SINE Alu 1 296 -16 3384 142 34 57 chr20 35488054 35488233 -36665649 - L1MA5 LINE L1 -2 7000 6818 1774 186 0 0 chr20 35488233 35488518 -36665364 + AluJb SINE Alu 3 287 -25 2050 98 0 44 chr20 35488526 35488849 -36665033 + AluSq SINE Alu 3 312 0 207 0 0 0 chr20 35488849 35488872 -36665010 + (TA)n Simple_repeat Simple_repeat 1 23 0 3384 142 34 57 chr20 35488872 35489387 -36664495 - L1MA5 LINE L1 -189 6813 6311 1197 146 98 93 chr20 35489387 35489633 -36664249 + AluSx SINE Alu 41 287 -25 12307 165 63 49 chr20 35489645 35490078 -36663804 - L1MA5 LINE L1 -742 6257 5832 2407 87 10 0 chr20 35490078 35490388 -36663494 + AluSp SINE Alu 1 313 0 12307 165 63 49 chr20 35490388 35490557 -36663325 - L1MA5 LINE L1 -1167 5832 5667 2137 134 0 0 chr20 35490557 35490849 -36663033 - AluSg SINE Alu -18 292 1 12307 165 63 49 chr20 35490849 35491125 -36662757 - L1MA5 LINE L1 -1332 5667 5396 1986 150 3 7 chr20 35491125 35491432 -36662450 - AluSx SINE Alu -6 306 1 12307 165 63 49 chr20 35491432 35492531 -36661351 - L1MA5 LINE L1 -1603 5396 4314 2363 84 0 0 chr20 35492531 35492828 -36661054 - AluY SINE Alu -14 297 1 420 45 30 0 chr20 35492831 35492897 -36660985 - AluY SINE Alu 0 309 242 12307 165 63 49 chr20 35492897 35494676 -36659206 - L1MA5 LINE L1 -2686 4313 2402 432 253 89 42 chr20 35494752 35494989 -36658893 - MER20B DNA MER1_type -21 762 515 2462 76 3 0 chr20 35495048 35495349 -36658533 + AluSp SINE Alu 1 302 -11 925 214 6 6 chr20 35495791 35495964 -36657918 + FAM SINE Alu 1 173 -2 2161 101 42 0 chr20 35495983 35496270 -36657612 + AluSq SINE Alu 1 299 -14 1982 137 25 0 chr20 35496295 35496572 -36657310 + AluSx SINE Alu 5 288 -24 341 276 45 22 chr20 35496776 35496910 -36656972 - MER20B DNA MER1_type -591 192 56 432 231 19 7 chr20 35497291 35497384 -36656498 - MER5A DNA MER1_type -3 186 82 1980 181 3 0 chr20 35497425 35497735 -36656147 - AluSx SINE Alu -1 311 1 510 195 9 26 chr20 35497735 35497848 -36656034 - MER5A DNA MER1_type -77 112 2 259 274 0 0 chr20 35498037 35498110 -36655772 - L1MB7 LINE L1 -72 6112 6040 1519 165 25 87 chr20 35498502 35498582 -36655300 - L1MB7 LINE L1 -3 6181 6098 255 31 0 0 chr20 35498582 35498614 -36655268 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2142 123 0 0 chr20 35498614 35498898 -36654984 - AluSx SINE Alu -28 284 1 1519 165 25 87 chr20 35498898 35499114 -36654768 - L1MB7 LINE L1 -85 6099 5911 2239 85 7 10 chr20 35499114 35499408 -36654474 - AluSg SINE Alu -17 293 1 1519 165 25 87 chr20 35499408 35499502 -36654380 - L1MB7 LINE L1 -273 5911 5813 3544 133 75 105 chr20 35499505 35499624 -36654258 - L1MB3 LINE L1 -5 6178 6057 1574 190 7 0 chr20 35499624 35499898 -36653984 - AluJb SINE Alu -16 296 21 3544 133 75 105 chr20 35499898 35499957 -36653925 - L1MB3 LINE L1 -126 6057 5998 1924 132 97 13 chr20 35499957 35500268 -36653614 + MER1B DNA MER1_type 1 337 0 3544 133 75 105 chr20 35500268 35501147 -36652735 - L1MB3 LINE L1 -185 5998 5162 858 120 0 0 chr20 35502083 35502200 -36651682 + FLAM_C SINE Alu 1 117 -16 243 0 0 0 chr20 35503998 35504025 -36649857 + (T)n Simple_repeat Simple_repeat 1 27 0 584 111 89 0 chr20 35504298 35504388 -36649494 + FLAM_A SINE Alu 35 132 -10 4604 98 28 18 chr20 35505101 35505754 -36648128 - PABL_A LTR ERV1 0 660 2 229 300 221 0 chr20 35506783 35506923 -36646959 - MIR SINE MIR 0 262 92 291 309 122 42 chr20 35507055 35507093 -36646789 + L2 LINE L2 2492 2526 -788 2284 72 14 3 chr20 35507093 35507383 -36646499 - AluSx SINE Alu -19 293 1 291 309 122 42 chr20 35507383 35507606 -36646276 + L2 LINE L2 2526 2774 -540 2344 74 7 10 chr20 35507607 35507905 -36645977 - AluSg SINE Alu -13 297 1 1672 207 147 19 chr20 35508204 35508716 -36645166 - L1MD3 LINE L1 -1 7994 7418 2114 99 7 13 chr20 35509446 35509749 -36644133 - AluJo SINE Alu -11 301 1 367 307 98 44 chr20 35510342 35510547 -36643335 - MIR SINE MIR -9 253 38 612 105 0 112 chr20 35511047 35511175 -36642707 - L1MA4 LINE L1 -11 6289 6177 2300 92 0 29 chr20 35511175 35511491 -36642391 - AluY SINE Alu -4 307 1 612 105 0 112 chr20 35511491 35511505 -36642377 - L1MA4 LINE L1 -123 6177 6163 819 149 48 18 chr20 35511505 35511673 -36642209 - L1M1 LINE L1 -537 5766 5594 1349 143 29 0 chr20 35511691 35511935 -36641947 - L1M1 LINE L1 -1262 4884 4634 1467 138 0 30 chr20 35512077 35512308 -36641574 - AluJb SINE Alu -88 224 1 1992 107 0 91 chr20 35512447 35512766 -36641116 - AluSx SINE Alu -12 300 11 329 342 80 10 chr20 35512771 35512970 -36640912 - L1ME4a LINE L1 -35 6086 5874 554 176 0 0 chr20 35512972 35513057 -36640825 + AluJb SINE Alu 179 263 -49 369 320 41 8 chr20 35513089 35513211 -36640671 - L1MC4a LINE L1 -1890 5918 5793 253 244 110 16 chr20 35513212 35513339 -36640543 - L1MC4a LINE L1 -2050 5758 5620 2025 141 16 0 chr20 35513406 35513711 -36640171 + AluSx SINE Alu 1 310 -2 270 276 39 102 chr20 35513913 35513995 -36639887 - L1ME4a LINE L1 -305 5816 5730 2214 127 0 7 chr20 35513995 35514303 -36639579 - AluSx SINE Alu -6 306 1 270 276 39 102 chr20 35514303 35514474 -36639408 - L1ME4a LINE L1 -391 5730 5579 2127 127 27 0 chr20 35514566 35514865 -36639017 - AluSx SINE Alu -5 307 1 1780 153 46 0 chr20 35515319 35515600 -36638282 + AluJb SINE Alu 1 294 -18 374 242 33 0 chr20 35515687 35515778 -36638104 + L2 LINE L2 3164 3257 -56 326 337 135 0 chr20 35515770 35515933 -36637949 + MIR SINE MIR 62 246 -16 * 2024 148 10 10 chr20 35516018 35516328 -36637554 - AluJb SINE Alu -2 310 1 407 235 49 56 chr20 35516337 35516499 -36637383 - L3 LINE CR1 -607 970 810 920 285 106 17 chr20 35516830 35517418 -36636464 + L2 LINE L2 2657 3309 -4 280 314 74 48 chr20 35517430 35517659 -36636223 - L3 LINE CR1 -771 806 572 332 286 65 22 chr20 35517829 35518014 -36635868 - L1ME4a LINE L1 -224 5897 5705 182 240 53 93 chr20 35518094 35518169 -36635713 + L2 LINE L2 3236 3307 -6 2280 86 17 7 chr20 35518276 35518578 -36635304 - AluY SINE Alu -6 305 1 204 40 0 0 chr20 35520037 35520062 -36633820 + (T)n Simple_repeat Simple_repeat 1 25 0 684 74 53 0 chr20 35520066 35520161 -36633721 - HY3 scRNA scRNA -1 100 1 207 289 89 4 chr20 35520647 35520737 -36633145 - MIR SINE MIR -65 143 40 529 232 181 23 chr20 35520816 35520993 -36632889 + MIR SINE MIR 19 223 -39 392 355 7 13 chr20 35521103 35521258 -36632624 - MER5A DNA MER1_type 0 189 36 2955 3 0 0 chr20 35521585 35521896 -36631986 + AluYa5 SINE Alu 1 311 0 1519 151 28 85 chr20 35522238 35522557 -36631325 + AluJo SINE Alu 1 301 -11 2512 74 0 0 chr20 35523000 35523299 -36630583 + AluSq SINE Alu 1 299 -14 184 347 31 10 chr20 35523426 35523524 -36630358 + MIR SINE MIR 32 131 -77 534 278 49 25 chr20 35523822 35523984 -36629898 + MIR SINE MIR 6 171 -91 337 241 57 71 chr20 35524088 35524229 -36629653 - MIR SINE MIR -70 192 54 386 252 37 19 chr20 35524662 35524769 -36629113 + L2 LINE L2 3197 3305 -8 239 270 40 0 chr20 35525229 35525303 -36628579 - L2 LINE L2 -61 3252 3176 462 286 97 25 chr20 35525749 35525945 -36627937 - MIR SINE MIR -14 248 39 2405 104 0 0 chr20 35527092 35527400 -36626482 + AluSg SINE Alu 1 308 -2 2215 80 38 14 chr20 35527408 35527695 -36626187 + AluSx SINE Alu 1 294 -18 256 328 121 15 chr20 35527877 35528075 -36625807 + MIR SINE MIR 36 254 -8 222 341 0 44 chr20 35528636 35528771 -36625111 - L2 LINE L2 -182 3090 2962 206 290 116 65 chr20 35529738 35529876 -36624006 + MIR3 SINE MIR 22 166 -42 2464 77 0 0 chr20 35530022 35530319 -36623563 + AluSg SINE Alu 5 301 -9 244 171 0 0 chr20 35530912 35530953 -36622929 + L2 LINE L2 3182 3222 -91 1689 103 121 50 chr20 35531539 35531821 -36622061 - AluJo SINE Alu -10 302 1 1170 98 37 0 chr20 35531845 35532008 -36621874 + AluJb SINE Alu 134 302 -10 212 264 80 48 chr20 35532387 35532512 -36621370 + MIR3 SINE MIR 4 132 -76 1722 141 12 87 chr20 35532951 35533075 -36620807 + AluJb SINE Alu 1 133 -179 1913 124 76 0 chr20 35533075 35533350 -36620532 - AluSx SINE Alu -16 296 1 1722 141 12 87 chr20 35533350 35533559 -36620323 + AluJb SINE Alu 133 309 -3 207 267 0 0 chr20 35533590 35533635 -36620247 + MIR SINE MIR 56 100 -162 * 526 182 189 40 chr20 35533633 35533781 -36620101 + MER5A DNA MER1_type 17 186 -3 329 333 0 31 chr20 35533781 35533910 -36619972 + MIR SINE MIR 86 210 -52 1759 146 38 14 chr20 35536122 35536410 -36617472 + AluJo SINE Alu 1 295 -17 2292 105 0 7 chr20 35536462 35536768 -36617114 - AluSx SINE Alu -8 304 1 371 216 179 58 chr20 35536961 35537151 -36616731 - L1MC4 LINE L1 -1 8041 7829 300 174 326 28 chr20 35537185 35537329 -36616553 - L1ME2 LINE L1 -14 6150 5964 245 267 67 0 chr20 35537776 35537851 -36616031 + Tigger8 DNA MER2_type 406 485 -181 1666 148 11 25 chr20 35538744 35539022 -36614860 - AluSx SINE Alu -37 275 2 637 258 169 22 chr20 35539269 35539672 -36614210 - L2 LINE L2 -655 2659 2198 1903 146 39 0 chr20 35539673 35539954 -36613928 + AluJb SINE Alu 1 292 -20 2405 84 7 0 chr20 35539963 35540261 -36613621 + AluSp SINE Alu 1 300 -13 464 322 6 23 chr20 35540261 35540438 -36613444 - MLT1J LTR MaLR -219 292 119 200 247 91 0 chr20 35540521 35540598 -36613284 - L2 LINE L2 -1714 1600 1517 27 0 0 0 chr20 35540923 35540950 -36612932 + AT_rich Low_complexity Low_complexity 1 27 0 615 95 175 71 chr20 35540971 35541021 -36612861 - FLAM_C SINE Alu -172 140 97 1826 147 73 20 chr20 35541021 35541375 -36612507 + THE1C LTR MaLR 1 373 -2 615 95 175 71 chr20 35541375 35541450 -36612432 - FLAM_C SINE Alu -215 97 2 2402 100 0 0 chr20 35542259 35542559 -36611323 - AluSq SINE Alu -13 300 1 2060 131 27 0 chr20 35542582 35542879 -36611003 - AluSx SINE Alu -7 305 1 1352 229 73 5 chr20 35543032 35543416 -36610466 - MER66A LTR ERV1 -40 438 29 214 276 133 19 chr20 35543878 35543983 -36609899 - L2 LINE L2 -87 3185 3069 * 410 242 86 16 chr20 35543976 35544104 -36609778 - L2 LINE L2 -2 3311 3175 1696 234 70 66 chr20 35544117 35544523 -36609359 + L1ME2 LINE L1 5423 5826 -338 2004 128 21 21 chr20 35544523 35544812 -36609070 + AluSg SINE Alu 5 293 -17 1696 234 70 66 chr20 35544812 35545021 -36608861 + L1ME2 LINE L1 5826 6044 -120 1992 84 54 27 chr20 35545021 35545317 -36608565 - AluSx SINE Alu -8 304 1 1696 234 70 66 chr20 35545317 35545425 -36608457 + L1ME2 LINE L1 6044 6150 -14 302 255 98 10 chr20 35545459 35545561 -36608321 + L1MC4 LINE L1 7837 7947 -95 1939 132 3 17 chr20 35545562 35545851 -36608031 - AluSx SINE Alu -26 286 2 985 240 185 47 chr20 35545966 35546460 -36607422 - L2 LINE L2 -263 3050 2388 2050 146 7 3 chr20 35546460 35546769 -36607113 + AluSq SINE Alu 1 310 -3 985 240 185 47 chr20 35546769 35546937 -36606945 - L2 LINE L2 -925 2388 2245 752 215 149 5 chr20 35547178 35547373 -36606509 + MER58A DNA MER1_type 1 223 -1 460 271 123 30 chr20 35547425 35547661 -36606221 - L1ME LINE L1 -363 5758 5501 2622 71 0 0 chr20 35547916 35548225 -36605657 - AluSc SINE Alu 0 309 1 1672 123 6 126 chr20 35548227 35548561 -36605321 - AluJb SINE Alu -18 294 1 1105 151 76 23 chr20 35548634 35548693 -36605189 - AluJo SINE Alu -104 208 154 2275 121 3 3 chr20 35548693 35548998 -36604884 - AluSx SINE Alu -7 305 1 1105 151 76 23 chr20 35548998 35549110 -36604772 - AluJo SINE Alu -158 154 24 844 228 0 6 chr20 35549207 35549369 -36604513 - FRAM SINE Alu -15 161 1 2605 53 7 0 chr20 35549391 35549695 -36604187 - AluY SINE Alu -5 306 1 22 0 0 0 chr20 35549738 35549760 -36604122 + AT_rich Low_complexity Low_complexity 1 22 0 391 283 90 93 chr20 35549820 35550153 -36603729 - L1MDa LINE L1 -3346 3194 2861 2150 126 0 13 chr20 35550153 35550454 -36603428 - AluSx SINE Alu -15 297 1 266 255 104 24 chr20 35550547 35550769 -36603113 - L1MDa LINE L1 -3754 2786 2542 2233 78 0 14 chr20 35551198 35551479 -36602403 + AluSc SINE Alu 1 277 -32 205 162 0 0 chr20 35552652 35552689 -36601193 + G-rich Low_complexity Low_complexity 1 37 0 465 294 148 52 chr20 35554759 35555597 -36598285 + L2 LINE L2 2239 3235 -37 222 305 160 0 chr20 35555839 35555970 -36597912 - MIR3 SINE MIR -27 181 30 297 227 15 30 chr20 35556134 35556200 -36597682 - MIR SINE MIR -115 147 83 513 123 0 12 chr20 35556603 35556684 -36597198 - MER116 DNA Mariner 0 80 1 2196 76 62 3 chr20 35556839 35557128 -36596754 + AluSp SINE Alu 1 306 -7 2327 200 44 61 chr20 35557151 35557929 -36595953 + L1MD3 LINE L1 7019 7995 0 629 222 48 0 chr20 35557940 35558066 -36595816 + FLAM_A SINE Alu 1 132 -1 255 190 77 22 chr20 35558713 35558795 -36595087 + MIR SINE MIR 80 144 -64 2047 79 28 38 chr20 35558820 35559111 -36594771 - AluSc SINE Alu -21 288 1 396 235 0 18 chr20 35559262 35559428 -36594454 + (CA)n Simple_repeat Simple_repeat 2 164 0 285 293 0 20 chr20 35559444 35559543 -36594339 + (CA)n Simple_repeat Simple_repeat 2 98 0 277 217 0 19 chr20 35559559 35559665 -36594217 + (CA)n Simple_repeat Simple_repeat 2 105 0 194 135 54 0 chr20 35560351 35560388 -36593494 - L2 LINE L2 -17 3255 3217 258 32 0 0 chr20 35561356 35561387 -36592495 + (TC)n Simple_repeat Simple_repeat 1 31 0 398 284 234 21 chr20 35561425 35561664 -36592218 + L2 LINE L2 2983 3272 0 1878 145 26 19 chr20 35562481 35562791 -36591091 + AluJo SINE Alu 1 312 0 1900 144 3 10 chr20 35562792 35563084 -36590798 - AluSq SINE Alu -23 290 1 355 284 0 11 chr20 35563374 35563469 -36590413 - L2 LINE L2 -48 3265 3172 * 514 239 110 7 chr20 35563449 35563604 -36590278 + MIR SINE MIR 19 189 -73 2134 98 56 3 chr20 35563964 35564250 -36589632 - AluSc SINE Alu -8 301 1 320 233 70 23 chr20 35564583 35564669 -36589213 - MIR SINE MIR -77 185 96 202 156 0 0 chr20 35565270 35565302 -36588580 - L2 LINE L2 -259 3054 3023 365 315 27 13 chr20 35565546 35565695 -36588187 + L1ME LINE L1 5532 5682 -439 230 97 16 81 chr20 35565724 35565786 -36588096 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 717 121 0 0 chr20 35565788 35565887 -36587995 - AluS SINE Alu -213 99 1 2120 142 0 22 chr20 35565918 35566229 -36587653 + AluSx SINE Alu 1 304 -8 788 207 0 0 chr20 35566563 35566703 -36587179 - FLAM_C SINE Alu -2 141 2 269 318 40 56 chr20 35567781 35567907 -36585975 + MER5A DNA MER1_type 24 147 -42 201 111 0 0 chr20 35567958 35567985 -36585897 - MER5A DNA MER1_type -113 76 50 222 281 79 11 chr20 35568339 35568428 -36585454 + MIR SINE MIR 86 180 -82 287 226 243 18 chr20 35569498 35569629 -36584253 + MIR SINE MIR 12 164 -62 960 98 0 49 chr20 35569650 35569793 -36584089 + FLAM_C SINE Alu 5 140 -3 611 194 70 9 chr20 35569889 35570161 -36583721 - MLT1D LTR MaLR -3 502 180 892 177 0 0 chr20 35570185 35570326 -36583556 - FRAM SINE Alu -22 154 14 474 138 100 0 chr20 35570336 35570416 -36583466 - L1MC1 LINE L1 -6 6327 6240 780 161 115 35 chr20 35570418 35570592 -36583290 - MLT1D LTR MaLR -317 188 1 28 48 0 0 chr20 35570670 35570712 -36583170 + AT_rich Low_complexity Low_complexity 1 42 0 209 289 0 0 chr20 35570728 35570773 -36583109 + L2 LINE L2 3210 3254 -18 2171 125 0 0 chr20 35570987 35571308 -36582574 + AluSx SINE Alu 1 312 0 511 184 58 39 chr20 35571321 35571424 -36582458 + MER5B DNA MER1_type 74 178 0 186 238 25 75 chr20 35572473 35572553 -36581329 + MIR SINE MIR 49 124 -84 343 289 114 30 chr20 35573473 35573639 -36580243 - MIR SINE MIR -51 211 32 289 317 69 10 chr20 35574234 35574335 -36579547 - L2 LINE L2 -10 3262 3156 459 168 376 0 chr20 35574547 35574696 -36579186 - MER3 DNA MER1_type -4 205 1 887 228 44 35 chr20 35574698 35574926 -36578956 + MIR SINE MIR 34 262 0 2007 151 7 7 chr20 35575951 35576250 -36577632 + AluJb SINE Alu 1 299 -13 231 230 69 67 chr20 35576250 35576339 -36577543 - MIR SINE MIR -56 152 62 722 265 47 42 chr20 35577634 35577849 -36576033 + MIR SINE MIR 23 238 -24 1884 134 9 70 chr20 35578055 35578233 -36575649 - AluJo SINE Alu -3 309 122 210 37 0 0 chr20 35578233 35578260 -36575622 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2077 133 0 0 chr20 35578260 35578539 -36575343 - AluSx SINE Alu -31 281 3 1884 134 9 70 chr20 35578539 35578688 -36575194 - AluJo SINE Alu -188 124 1 315 274 179 8 chr20 35580142 35580259 -36573623 + L2 LINE L2 3136 3272 0 900 85 78 0 chr20 35580460 35580589 -36573293 + MER85 DNA T2_type 1 139 0 1041 147 16 42 chr20 35580627 35580817 -36573065 + MER5A DNA MER1_type 5 189 0 4024 147 19 42 chr20 35580911 35581557 -36572325 - L1MA7 LINE L1 -6 6285 5660 1929 109 49 0 chr20 35581557 35581823 -36572059 + AluSg SINE Alu 20 298 -12 4024 147 19 42 chr20 35581823 35581977 -36571905 - L1MA7 LINE L1 -631 5660 5504 323 283 161 12 chr20 35582325 35582574 -36571308 + L1ME LINE L1 5595 5873 -297 405 0 0 0 chr20 35582658 35582703 -36571179 + (CA)n Simple_repeat Simple_repeat 2 46 0 2266 103 3 0 chr20 35582914 35583204 -36570678 - AluSc SINE Alu -18 291 1 2437 92 7 0 chr20 35583204 35583509 -36570373 - AluSq SINE Alu -5 308 1 2040 136 0 11 chr20 35583828 35584115 -36569767 + AluSx SINE Alu 1 284 -28 647 80 0 10 chr20 35584115 35584215 -36569667 + (CATAA)n Simple_repeat Simple_repeat 2 100 0 770 250 80 83 chr20 35584230 35584294 -36569588 + L1ME2 LINE L1 2202 2265 -3881 2567 63 3 0 chr20 35584294 35584594 -36569288 + AluY SINE Alu 1 301 -10 770 250 80 83 chr20 35584594 35585165 -36568717 + L1ME2 LINE L1 2265 2835 -3311 643 113 48 8 chr20 35585195 35585319 -36568563 - L1MA8 LINE L1 -113 6178 6050 440 283 136 40 chr20 35585324 35585460 -36568422 + L1ME2 LINE L1 2860 2982 -3164 2330 90 3 6 chr20 35585460 35585771 -36568111 + AluY SINE Alu 1 310 -1 440 283 136 40 chr20 35585771 35586164 -36567718 + L1ME2 LINE L1 2982 3440 -2706 466 244 117 37 chr20 35586187 35586511 -36567371 + L1MC4 LINE L1 7616 7965 -77 1942 147 13 17 chr20 35586610 35586909 -36566973 + AluJb SINE Alu 3 300 -12 583 313 39 30 chr20 35586935 35587341 -36566541 + L1ME2 LINE L1 4644 5053 -1093 430 127 0 28 chr20 35587377 35587448 -36566434 + AluJ/FRAM SINE Alu 228 296 -16 2105 146 0 0 chr20 35587450 35587752 -36566130 + AluJb SINE Alu 3 304 -8 2060 180 48 98 chr20 35587766 35588093 -36565789 + L1MC4a LINE L1 5621 5963 -1845 1911 109 0 0 chr20 35588093 35588340 -36565542 + AluSq SINE Alu 49 295 -18 2060 180 48 98 chr20 35588340 35588364 -36565518 + L1MC4a LINE L1 5963 5987 -1821 2632 51 0 13 chr20 35588364 35588677 -36565205 + AluY SINE Alu 1 309 -2 2060 180 48 98 chr20 35588677 35588756 -36565126 + L1MC4a LINE L1 5987 6068 -1740 1938 149 65 0 chr20 35588756 35589078 -36564804 - MER2 DNA MER2_type -1 343 1 2060 180 48 98 chr20 35589078 35589371 -36564511 + L1MC4a LINE L1 6068 6310 -1498 258 125 95 2 chr20 35589371 35589605 -36564277 + AluSx SINE Alu 1 302 0 1906 217 78 8 chr20 35589609 35590144 -36563738 + L1MD3 LINE L1 7423 7995 0 447 333 71 5 chr20 35590258 35590456 -36563426 - L1M4 LINE L1 -3497 2649 2439 2027 227 119 20 chr20 35590469 35591153 -36562729 + L1ME2 LINE L1 5403 6164 0 472 294 44 44 chr20 35591186 35591366 -36562516 + L1MC4 LINE L1 7833 8012 -30 878 114 7 50 chr20 35591477 35591617 -36562265 + AluJb SINE Alu 1 134 -178 410 303 30 18 chr20 35591787 35591952 -36561930 - L2 LINE L2 -302 2970 2804 1137 161 10 36 chr20 35592415 35592608 -36561274 - AluJo SINE Alu -34 278 91 2041 146 10 0 chr20 35592724 35593018 -36560864 + AluJb SINE Alu 1 297 -15 814 198 33 0 chr20 35593437 35593619 -36560263 - MER3 DNA MER1_type -21 188 1 2135 117 47 0 chr20 35593678 35594008 -36559874 + AluSx SINE Alu 1 344 0 2449 89 3 0 chr20 35594306 35594608 -36559274 + AluSp SINE Alu 1 303 -10 1870 159 172 5 chr20 35595054 35595449 -36558433 + MER65C LTR ERV1 1 461 0 210 71 0 0 chr20 35595542 35595553 -36558329 + (TAAAA)n Simple_repeat Simple_repeat 1 11 -308 2124 121 0 0 chr20 35595553 35595833 -36558049 + AluSx SINE Alu 1 280 -32 210 71 0 0 chr20 35595833 35595861 -36558021 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 2340 112 0 0 chr20 35595868 35596173 -36557709 + AluSx SINE Alu 1 305 -7 325 307 59 40 chr20 35596232 35596434 -36557448 - L1ME3A LINE L1 0 6170 5965 2238 218 91 51 chr20 35596588 35597411 -36556471 - L1MC5 LINE L1 -469 7492 6637 260 27 27 0 chr20 35597411 35597448 -36556434 + (CA)n Simple_repeat Simple_repeat 2 39 0 376 215 69 47 chr20 35597449 35597685 -36556197 - MER102a DNA MER1_type -21 309 21 476 180 313 33 chr20 35599077 35599227 -36554655 - MIR SINE MIR 0 262 71 817 264 79 71 chr20 35599267 35599528 -36554354 - L1MC4 LINE L1 0 8042 7785 2549 66 3 0 chr20 35599528 35599830 -36554052 + AluY SINE Alu 6 303 -8 817 264 79 71 chr20 35599830 35600301 -36553581 - L1MC4 LINE L1 -257 7785 7268 2252 109 0 6 chr20 35600301 35600612 -36553270 - AluSg1 SINE Alu 0 309 1 817 264 79 71 chr20 35600612 35600746 -36553136 - L1MC4 LINE L1 -774 7268 7137 1482 221 192 22 chr20 35600747 35601325 -36552557 + LTR1B LTR ERV1 1 676 -150 668 135 0 0 chr20 35601373 35601469 -36552413 - AluJ/FLAM SINE Alu -216 96 1 2226 106 3 3 chr20 35601625 35601927 -36551955 - AluSx SINE Alu -10 302 1 426 249 61 50 chr20 35601929 35602110 -36551772 - L1MC4 LINE L1 -985 7057 6875 258 277 226 13 chr20 35602317 35602476 -36551406 - L3 LINE CR1 -81 1496 1304 1538 153 12 90 chr20 35602554 35602875 -36551007 + AluJo SINE Alu 1 296 -16 2265 123 0 13 chr20 35602902 35603218 -36550664 - AluSx SINE Alu 0 312 1 2506 92 0 12 chr20 35603306 35603644 -36550238 + THE1C LTR MaLR 1 334 -41 9957 82 21 20 chr20 35603644 35604918 -36548964 + L1PA8 LINE L1 4026 5305 -867 2348 99 0 10 chr20 35604918 35605230 -36548652 + AluSc SINE Alu 1 309 0 9957 82 21 20 chr20 35605230 35606095 -36547787 + L1PA8 LINE L1 5305 6168 -4 228 107 0 240 chr20 35606131 35606168 -36547714 + THE1C LTR MaLR 319 331 -44 2085 153 3 0 chr20 35606168 35606476 -36547406 - AluSx SINE Alu -3 309 1 228 107 0 240 chr20 35606476 35606513 -36547369 + THE1C LTR MaLR 331 375 0 21 36 0 0 chr20 35606525 35606553 -36547329 + AT_rich Low_complexity Low_complexity 1 28 0 206 358 0 0 chr20 35606862 35606929 -36546953 + L2 LINE L2 3237 3303 -10 240 241 53 87 chr20 35607276 35607483 -36546399 + L1ME LINE L1 5383 5582 -539 2013 153 0 10 chr20 35607567 35607881 -36546001 + AluJb SINE Alu 1 311 -1 1772 153 27 30 chr20 35607896 35608197 -36545685 + AluJb SINE Alu 1 300 -12 605 283 22 91 chr20 35608555 35608831 -36545051 + MIR SINE MIR 3 259 -3 271 310 90 10 chr20 35608841 35608941 -36544941 - MIR SINE MIR -6 256 149 1564 124 108 4 chr20 35609064 35609305 -36544577 + Tigger7 DNA MER2_type 2 267 -283 555 200 0 10 chr20 35609306 35609406 -36544476 + Tigger7 DNA MER2_type 2389 2487 0 25 31 0 0 chr20 35610324 35610356 -36543526 + AT_rich Low_complexity Low_complexity 1 32 0 1814 130 16 0 chr20 35610388 35610641 -36543241 + AluSq SINE Alu 4 260 -53 5329 77 6 1 chr20 35610641 35611314 -36542568 + THE1A-int LTR MaLR 905 1580 0 2327 77 6 37 chr20 35611314 35611641 -36542241 + THE1A LTR MaLR 1 317 -38 472 255 81 0 chr20 35611660 35611809 -36542073 + L1ME4a LINE L1 5959 6119 -2 1775 181 0 16 chr20 35612053 35612357 -36541525 + AluJo SINE Alu 1 299 -13 332 325 97 27 chr20 35613583 35613912 -36539970 + L2 LINE L2 2624 2975 -339 223 179 0 0 chr20 35614012 35614051 -36539831 - L2 LINE L2 -17 3255 3217 2409 66 33 0 chr20 35614083 35614384 -36539498 + AluY SINE Alu 1 311 0 283 288 0 54 chr20 35614461 35614572 -36539310 - MIR SINE MIR -79 183 79 272 301 71 9 chr20 35614627 35614740 -36539142 + L2 LINE L2 3116 3235 -37 189 147 0 0 chr20 35614743 35614777 -36539105 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 226 260 115 0 chr20 35615315 35615411 -36538471 - L2 LINE L2 -12 3260 3154 729 231 53 6 chr20 35615618 35615787 -36538095 + L1ME3A LINE L1 5993 6169 -1 2396 89 0 0 chr20 35615790 35616094 -36537788 + AluSg SINE Alu 1 304 -6 864 247 60 49 chr20 35616944 35617189 -36536693 - MIR SINE MIR -13 249 6 255 294 191 0 chr20 35617268 35617404 -36536478 - MIR SINE MIR -48 214 53 550 165 46 18 chr20 35617626 35617735 -36536147 - FRAM SINE Alu -7 169 58 574 291 6 22 chr20 35617814 35617993 -36535889 - MIR SINE MIR -72 190 15 2431 85 13 0 chr20 35618643 35618950 -36534932 + AluSp SINE Alu 1 311 -2 737 194 0 0 chr20 35619078 35619202 -36534680 + FLAM_C SINE Alu 2 125 -18 506 145 0 0 chr20 35619213 35619296 -36534586 + AluS SINE Alu 227 309 0 889 157 0 90 chr20 35619321 35619499 -36534383 + FRAM SINE Alu 5 166 -10 209 108 27 0 chr20 35619499 35619536 -36534346 + (TA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr20 35619578 35619599 -36534283 + AT_rich Low_complexity Low_complexity 1 21 0 534 240 82 25 chr20 35619603 35619799 -36534083 - L1ME LINE L1 -313 5808 5602 21 36 0 0 chr20 35619821 35619849 -36534033 + AT_rich Low_complexity Low_complexity 1 28 0 2500 67 0 3 chr20 35619857 35620157 -36533725 - AluSq SINE Alu -14 299 1 242 274 44 93 chr20 35620189 35620415 -36533467 - L1ME LINE L1 -560 5561 5347 32 0 0 0 chr20 35620460 35620492 -36533390 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr20 35620848 35620869 -36533013 + AT_rich Low_complexity Low_complexity 1 21 0 376 252 117 43 chr20 35621700 35621754 -36532128 + L1ME LINE L1 5521 5570 -551 759 187 0 8 chr20 35621754 35621888 -36531994 + FLAM_C SINE Alu 1 133 0 376 252 117 43 chr20 35621888 35622115 -36531767 + L1ME LINE L1 5570 5823 -298 2157 123 7 0 chr20 35622124 35622408 -36531474 + AluSx SINE Alu 3 288 -24 369 228 107 99 chr20 35622443 35622572 -36531310 + MLT1G1 LTR MaLR 1 127 -422 2161 116 0 26 chr20 35622572 35622875 -36531007 - AluSg1 SINE Alu -14 295 1 369 228 107 99 chr20 35622875 35623254 -36530628 + MLT1G1 LTR MaLR 127 549 0 3462 262 73 93 chr20 35623324 35624199 -36529683 + HAL1 LINE L1 2 893 -1614 1888 141 43 10 chr20 35624199 35624498 -36529384 - AluJo SINE Alu -3 309 1 3462 262 73 93 chr20 35624498 35625100 -36528782 + HAL1 LINE L1 893 1506 -1001 1518 82 0 82 chr20 35625100 35625276 -36528606 - AluY SINE Alu -5 306 152 576 0 0 0 chr20 35625276 35625340 -36528542 + (TA)n Simple_repeat Simple_repeat 2 65 0 1518 82 0 82 chr20 35625340 35625395 -36528487 - AluY SINE Alu -159 152 94 1938 163 0 3 chr20 35625395 35625694 -36528188 - AluJo SINE Alu -12 300 1 3462 262 73 93 chr20 35625694 35625926 -36527956 + HAL1 LINE L1 1505 1740 -767 2361 89 3 0 chr20 35625926 35626218 -36527664 - AluSg1 SINE Alu -16 293 1 3462 262 73 93 chr20 35626218 35626735 -36527147 + HAL1 LINE L1 1740 2266 -241 1707 184 7 10 chr20 35626735 35627056 -36526826 + AluJb SINE Alu 1 312 0 3462 262 73 93 chr20 35627056 35627124 -36526758 + HAL1 LINE L1 2266 2334 -173 2089 115 14 10 chr20 35627124 35627420 -36526462 - AluSx SINE Alu -15 297 1 3462 262 73 93 chr20 35627420 35627625 -36526257 + HAL1 LINE L1 2334 2457 -50 1949 160 0 13 chr20 35627625 35627925 -36525957 - AluJo SINE Alu -16 296 1 3462 262 73 93 chr20 35627925 35627949 -36525933 + HAL1 LINE L1 2457 2480 -27 183 292 31 0 chr20 35628499 35628564 -36525318 - MIR SINE MIR -73 189 123 2332 100 3 0 chr20 35629147 35629458 -36524424 + AluSp SINE Alu 1 312 -1 1851 155 6 43 chr20 35629460 35629782 -36524100 + AluJb SINE Alu 1 310 -2 2257 107 0 3 chr20 35629814 35630112 -36523770 + AluSx SINE Alu 1 297 -15 194 393 56 9 chr20 35630644 35630751 -36523131 + L3 LINE CR1 1455 1566 -11 496 278 134 73 chr20 35631586 35632080 -36521802 + L2 LINE L2 2751 3272 0 2544 64 0 0 chr20 35632673 35632969 -36520913 + AluY SINE Alu 1 296 -15 21 57 0 0 chr20 35633192 35633227 -36520655 + AT_rich Low_complexity Low_complexity 1 35 0 357 125 0 0 chr20 35634034 35634090 -36519792 + (CA)n Simple_repeat Simple_repeat 2 57 0 24 53 0 0 chr20 35634304 35634342 -36519540 + AT_rich Low_complexity Low_complexity 1 38 0 2085 85 3 79 chr20 35634454 35634770 -36519112 - AluSg SINE Alu -18 292 1 1358 149 0 19 chr20 35635772 35635986 -36517896 - AluJb SINE Alu -21 291 82 387 124 0 34 chr20 35636178 35636267 -36517615 + (TA)n Simple_repeat Simple_repeat 2 87 0 1211 144 0 50 chr20 35636298 35636500 -36517382 - AluSg/x SINE Alu -9 303 112 198 0 0 0 chr20 35637354 35637376 -36516506 + (A)n Simple_repeat Simple_repeat 1 22 0 232 214 14 71 chr20 35638072 35638142 -36515740 + L2 LINE L2 3236 3301 -12 743 203 0 0 chr20 35638626 35638759 -36515123 + FLAM_A SINE Alu 1 133 0 22 56 0 0 chr20 35638778 35638814 -36515068 + AT_rich Low_complexity Low_complexity 1 36 0 2298 67 0 7 chr20 35639167 35639483 -36514399 + AluY SINE Alu 1 314 0 685 267 40 30 chr20 35639610 35639913 -36513969 - L1MCc LINE L1 -2512 4429 4124 648 180 74 42 chr20 35639892 35639973 -36513909 - L1MCc LINE L1 -3106 3835 3758 * 2224 104 0 0 chr20 35639973 35640262 -36513620 - AluSx SINE Alu -23 289 1 648 180 74 42 chr20 35640262 35640369 -36513513 - L1MCc LINE L1 -3183 3758 3641 1302 134 4 77 chr20 35640369 35640545 -36513337 - AluSg SINE Alu 0 305 118 1660 122 115 14 chr20 35640545 35640824 -36513058 - AluSg1 SINE Alu -2 307 1 2298 83 21 0 chr20 35640825 35641113 -36512769 - AluSg SINE Alu -16 294 1 1302 134 4 77 chr20 35641113 35641219 -36512663 - AluSg SINE Alu -186 119 40 1324 278 77 15 chr20 35641231 35641521 -36512361 - L1MCc LINE L1 -3316 3625 3354 1944 167 0 7 chr20 35641521 35641827 -36512055 + AluJb SINE Alu 1 304 -8 1324 278 77 15 chr20 35641827 35642083 -36511799 - L1MCc LINE L1 -3587 3354 3045 2003 166 0 13 chr20 35642089 35642402 -36511480 - AluJb SINE Alu -3 309 1 198 103 0 0 chr20 35642409 35642438 -36511444 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2237 86 4 0 chr20 35642440 35642720 -36511162 - AluY SINE Alu -30 281 1 389 268 47 74 chr20 35642751 35643077 -36510805 - L1MCc LINE L1 -4900 1523 1190 2299 93 0 45 chr20 35643077 35643388 -36510494 - AluSx SINE Alu -15 297 1 389 268 47 74 chr20 35643388 35643399 -36510483 - L1MCc LINE L1 -5233 1190 1180 2604 56 0 0 chr20 35643399 35643701 -36510181 - AluY SINE Alu -9 302 1 389 268 47 74 chr20 35643701 35643823 -36510059 - L1MCc LINE L1 -5243 1180 1056 1911 154 7 23 chr20 35643823 35644122 -36509760 - AluSx SINE Alu -18 294 1 389 268 47 74 chr20 35644122 35644255 -36509627 - L1MCc LINE L1 -5367 1056 1336 2342 119 0 0 chr20 35644255 35644567 -36509315 - AluSx SINE Alu 0 312 1 389 268 47 74 chr20 35644567 35644651 -36509231 - L1MCc LINE L1 -5086 1337 1252 229 175 13 182 chr20 35645036 35645190 -36508692 - L1MCc LINE L1 -5939 992 865 203 281 70 0 chr20 35645317 35645374 -36508508 + MIR SINE MIR 7 67 -195 964 139 42 24 chr20 35645384 35645549 -36508333 + AluJo SINE Alu 10 177 -135 1731 184 13 29 chr20 35645549 35645858 -36508024 - AluJb SINE Alu -8 304 1 343 241 60 0 chr20 35645859 35645942 -36507940 - L1MA10 LINE L1 -64 6270 6183 * 3341 207 67 8 chr20 35645938 35646528 -36507354 - L1M4 LINE L1 -2911 3235 2580 2211 109 14 0 chr20 35646528 35646822 -36507060 - AluSx SINE Alu -14 298 1 3341 207 67 8 chr20 35646822 35647067 -36506815 - L1M4 LINE L1 -3566 2580 2351 427 275 63 14 chr20 35647069 35647211 -36506671 + L2 LINE L2 3163 3311 -2 2391 77 0 0 chr20 35647413 35647710 -36506172 - AluY SINE Alu -14 297 1 2069 100 3 63 chr20 35647734 35648053 -36505829 + AluSx SINE Alu 1 300 -12 2383 88 0 0 chr20 35648278 35648574 -36505308 + AluSg SINE Alu 1 296 -14 1929 168 0 10 chr20 35648578 35648876 -36505006 + AluJo SINE Alu 1 295 -17 2271 98 0 10 chr20 35648947 35649244 -36504638 + AluY SINE Alu 5 298 -13 493 300 101 8 chr20 35649254 35649491 -36504391 - L2 LINE L2 -461 2853 2595 2274 114 0 0 chr20 35649519 35649825 -36504057 - AluSg SINE Alu -4 306 1 2602 60 0 0 chr20 35649834 35650135 -36503747 - AluY SINE Alu -10 301 1 1125 150 30 0 chr20 35650166 35650333 -36503549 + AluJb SINE Alu 127 298 -14 357 327 98 0 chr20 35650897 35651050 -36502832 - L3 LINE CR1 -73 1504 1337 409 265 117 65 chr20 35651157 35651481 -36502401 + L1ME4a LINE L1 5506 5846 -275 189 0 0 0 chr20 35651481 35651502 -36502380 + (TCTCCC)n Simple_repeat Simple_repeat 5 25 0 6285 73 18 22 chr20 35651505 35652624 -36501258 + SVA Other Other 1 866 -520 6887 63 14 42 chr20 35652641 35653622 -36500260 + SVA Other Other 433 1386 0 185 0 40 0 chr20 35653635 35653660 -36500222 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 735 174 28 28 chr20 35653661 35653839 -36500043 + L1MC4a LINE L1 7011 7188 -620 2324 105 0 0 chr20 35653864 35654159 -36499723 + AluSx SINE Alu 9 303 -9 1305 188 49 92 chr20 35654160 35654606 -36499276 + L1MD3 LINE L1 7569 7995 0 5318 110 7 38 chr20 35654758 35655625 -36498257 - L1PA15 LINE L1 -2 6163 5324 1968 141 0 56 chr20 35655637 35655943 -36497939 - AluJb SINE Alu -23 289 1 1874 126 8 0 chr20 35655950 35656212 -36497670 - AluSx SINE Alu -13 299 36 1813 172 10 3 chr20 35656461 35656758 -36497124 - AluJo SINE Alu -13 299 1 1504 163 4 4 chr20 35656820 35657059 -36496823 + AluJo SINE Alu 73 311 -1 1343 163 28 9 chr20 35657708 35657923 -36495959 - AluJo SINE Alu -10 302 84 1783 123 109 18 chr20 35657970 35658254 -36495628 + AluSg SINE Alu 1 310 0 1918 138 38 3 chr20 35658261 35658550 -36495332 + AluJo SINE Alu 1 299 -13 2147 111 7 29 chr20 35658577 35658746 -36495136 - AluSg SINE Alu -10 300 140 2893 10 0 0 chr20 35658746 35659056 -36494826 - AluY SINE Alu -1 310 1 2147 111 7 29 chr20 35659056 35659193 -36494689 - AluSg SINE Alu -170 140 1 2019 138 0 0 chr20 35659480 35659749 -36494133 + AluSx SINE Alu 24 292 -20 1485 151 56 53 chr20 35660064 35660238 -36493644 - AluJo SINE Alu 0 320 143 2729 42 0 6 chr20 35660238 35660551 -36493331 - AluY SINE Alu 0 311 1 1485 151 56 53 chr20 35660551 35660695 -36493187 - AluJo SINE Alu -177 143 1 4062 204 55 37 chr20 35660843 35661734 -36492148 + L1MC4a LINE L1 6639 7513 -295 2388 92 3 0 chr20 35661734 35662037 -36491845 + AluSx SINE Alu 1 304 -8 2199 112 3 0 chr20 35662042 35662362 -36491520 + AluY SINE Alu 1 311 0 4062 204 55 37 chr20 35662362 35662423 -36491459 + L1MC4a LINE L1 7516 7574 -234 1741 168 9 22 chr20 35662423 35662738 -36491144 - AluJo SINE Alu 0 312 2 4062 204 55 37 chr20 35662738 35662928 -36490954 + L1MC4a LINE L1 7574 7808 0 2318 124 0 0 chr20 35662943 35663250 -36490632 + AluSx SINE Alu 6 312 0 549 216 95 26 chr20 35663258 35663448 -36490434 + L1MC5 LINE L1 7323 7525 -436 312 243 110 59 chr20 35663554 35663690 -36490192 + L1ME3A LINE L1 5962 6104 -66 2151 119 7 23 chr20 35663746 35664048 -36489834 - AluSx SINE Alu -15 297 1 2081 134 0 13 chr20 35664098 35664396 -36489486 - AluJb SINE Alu -17 295 2 641 234 76 29 chr20 35664632 35664803 -36489079 + MIR SINE MIR 74 252 -10 2357 93 10 3 chr20 35664805 35665115 -36488767 - AluSp SINE Alu -1 312 1 2134 117 7 13 chr20 35665192 35665490 -36488392 + AluSq SINE Alu 1 296 -17 2029 125 0 26 chr20 35665490 35665794 -36488088 - AluJb SINE Alu -16 296 1 519 310 198 9 chr20 35665890 35666122 -36487760 + MLT1K LTR MaLR 11 286 -302 1880 161 10 16 chr20 35666124 35666434 -36487448 + AluJo SINE Alu 1 308 -4 2666 50 0 0 chr20 35666526 35666827 -36487055 + AluY SINE Alu 1 301 -10 257 317 62 55 chr20 35667279 35667326 -36486556 - MIR SINE MIR -116 146 101 2393 99 0 0 chr20 35667326 35667628 -36486254 + AluSg SINE Alu 1 302 -8 2189 117 3 0 chr20 35667632 35667923 -36485959 + AluSq SINE Alu 6 297 -16 257 317 62 55 chr20 35667923 35668015 -36485867 - MIR SINE MIR -163 99 1 231 262 233 0 chr20 35668095 35668198 -36485684 - L2 LINE L2 -3 3310 3184 1806 128 19 75 chr20 35668198 35668518 -36485364 + AluJb SINE Alu 1 302 -10 2353 106 3 0 chr20 35668520 35668823 -36485059 + AluSp SINE Alu 1 304 -9 455 261 37 22 chr20 35669052 35669186 -36484696 + MIR SINE MIR 68 203 -59 826 124 31 0 chr20 35669285 35669414 -36484468 + FLAM_C SINE Alu 1 133 0 585 191 92 13 chr20 35669439 35669591 -36484291 + L1ME3A LINE L1 6007 6170 0 200 254 0 16 chr20 35670315 35670378 -36483504 + C-rich Low_complexity Low_complexity 5 66 0 21 0 0 0 chr20 35670646 35670667 -36483215 + GC_rich Low_complexity Low_complexity 1 21 0 1949 64 112 54 chr20 35671018 35671313 -36482569 - AluSx SINE Alu 0 312 1 1273 87 123 10 chr20 35671320 35671515 -36482367 - AluJb SINE Alu -12 300 84 239 309 0 15 chr20 35671560 35671628 -36482254 - L2 LINE L2 -4 3309 3243 2304 89 0 16 chr20 35671742 35672046 -36481836 - AluSp SINE Alu -14 299 1 1225 214 80 8 chr20 35672053 35672404 -36481478 - MER63B DNA MER1_type -55 381 6 2282 129 0 0 chr20 35672496 35672807 -36481075 + AluSx SINE Alu 1 311 -1 505 273 203 1 chr20 35672849 35673187 -36480695 - L2 LINE L2 -233 3080 2690 245 318 13 60 chr20 35673168 35673319 -36480563 - L2 LINE L2 -17 3296 3153 * 418 19 0 0 chr20 35673330 35673383 -36480499 + AluY SINE Alu 246 298 -12 2156 145 3 0 chr20 35673419 35673730 -36480152 + AluJb SINE Alu 1 312 0 2400 90 6 6 chr20 35673732 35674044 -36479838 + AluSx SINE Alu 1 312 0 315 297 31 39 chr20 35674163 35674291 -36479591 - MIR SINE MIR -12 250 124 261 314 89 16 chr20 35674327 35674451 -36479431 + MIR SINE MIR 130 262 0 982 193 5 5 chr20 35674616 35674813 -36479069 + L1MB8 LINE L1 5004 5200 -946 2158 119 7 0 chr20 35674815 35675110 -36478772 + AluSx SINE Alu 2 298 -14 2201 127 0 13 chr20 35675116 35675430 -36478452 + AluSg SINE Alu 1 310 0 883 115 0 8 chr20 35675432 35675554 -36478328 + AluJb SINE Alu 13 133 -179 1845 157 6 48 chr20 35675559 35675872 -36478010 + AluJb SINE Alu 1 300 -12 3630 156 25 43 chr20 35675873 35676160 -36477722 + L1MB8 LINE L1 5207 5498 -680 2276 115 0 3 chr20 35676160 35676465 -36477417 + AluSx SINE Alu 1 304 -8 3630 156 25 43 chr20 35676465 35676901 -36476981 + L1MB8 LINE L1 5498 5917 -261 1734 170 7 20 chr20 35676901 35677032 -36476850 + AluJb SINE Alu 5 136 -176 2303 115 3 3 chr20 35677032 35677344 -36476538 + AluSx SINE Alu 1 312 0 1734 170 7 20 chr20 35677344 35677518 -36476364 + AluJb SINE Alu 136 306 -6 3630 156 25 43 chr20 35677518 35677634 -36476248 + L1MB8 LINE L1 5917 6034 -144 2195 108 3 14 chr20 35677634 35677931 -36475951 + AluSp SINE Alu 1 294 -19 866 105 0 45 chr20 35677965 35678098 -36475784 - FLAM_C SINE Alu 0 143 17 258 266 170 32 chr20 35678110 35678204 -36475678 + MER5A DNA MER1_type 59 165 -24 * 387 295 19 38 chr20 35678131 35678236 -36475646 - MER5A DNA MER1_type -83 106 4 987 197 48 10 chr20 35678296 35678535 -36475347 - MIR SINE MIR 0 262 11 501 80 0 0 chr20 35678553 35678628 -36475254 + (GGTTG)n Simple_repeat Simple_repeat 4 78 0 775 199 7 0 chr20 35679030 35679176 -36474706 + MER7C DNA MER2_type 1 147 -455 * 1220 120 0 10 chr20 35679144 35679336 -36474546 + MER7A DNA MER2_type 68 255 -91 417 307 90 53 chr20 35679348 35679862 -36474020 - L2 LINE L2 -69 3244 2688 2422 97 6 0 chr20 35679862 35680173 -36473709 + AluSq SINE Alu 1 313 0 1860 136 0 65 chr20 35680191 35680501 -36473381 + AluJb SINE Alu 1 290 -22 352 280 20 10 chr20 35680691 35680791 -36473091 - MIR SINE MIR -64 144 44 2462 72 3 0 chr20 35681270 35681563 -36472319 + AluSc SINE Alu 1 294 -15 273 98 0 0 chr20 35681582 35681623 -36472259 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 199 295 16 0 chr20 35681630 35681691 -36472191 + L2 LINE L2 2724 2785 -529 700 89 0 0 chr20 35681694 35681784 -36472098 + AluSx SINE Alu 2 91 -222 287 304 45 9 chr20 35681882 35681994 -36471888 + L1MC4a LINE L1 5537 5652 -469 1545 117 10 0 chr20 35682033 35682239 -36471643 + AluSx SINE Alu 91 298 -12 1230 261 17 22 chr20 35682649 35683005 -36470877 - L1MEd LINE L1 -5491 628 275 295 208 170 19 chr20 35683033 35683139 -36470743 - L1MEd LINE L1 -5996 123 2 368 333 65 7 chr20 35683153 35683291 -36470591 + L2 LINE L2 3117 3262 -10 288 292 0 0 chr20 35683296 35683361 -36470521 - L3 LINE CR1 -109 1468 1404 527 295 148 17 chr20 35683574 35683811 -36470071 + L1MC/D LINE L1 5537 5804 -2004 2069 143 3 7 chr20 35683815 35684116 -36469766 - AluJb SINE Alu -12 300 1 2299 112 0 0 chr20 35684120 35684424 -36469458 - AluSq SINE Alu -8 305 2 2355 100 3 0 chr20 35684593 35684892 -36468990 - AluSx SINE Alu -12 300 1 588 246 113 8 chr20 35684948 35685196 -36468686 + L1MC4a LINE L1 5628 5901 -1907 2075 138 0 22 chr20 35685234 35685545 -36468337 - AluJb SINE Alu -4 308 5 2266 109 0 0 chr20 35685930 35686232 -36467650 - AluSc SINE Alu -7 302 1 252 0 0 0 chr20 35686232 35686260 -36467622 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1577 184 42 35 chr20 35686318 35686628 -36467254 - AluJb SINE Alu 0 312 1 2212 107 0 23 chr20 35686667 35686967 -36466915 - AluSx SINE Alu -19 293 1 2535 54 3 0 chr20 35687364 35687660 -36466222 - AluY SINE Alu -14 297 1 1931 154 0 23 chr20 35688014 35688319 -36465563 + AluJo SINE Alu 1 298 -14 2083 101 63 3 chr20 35688319 35688606 -36465276 + AluY SINE Alu 1 304 -7 677 224 65 12 chr20 35688609 35688779 -36465103 + MIR SINE MIR 28 206 -56 807 113 0 9 chr20 35688779 35688894 -36464988 + FLAM_A SINE Alu 20 133 -9 1582 163 50 7 chr20 35688908 35689185 -36464697 + AluSx SINE Alu 23 311 -1 2520 36 10 20 chr20 35689187 35689491 -36464391 + AluY SINE Alu 1 301 -10 1727 153 60 4 chr20 35689769 35690050 -36463832 + AluJo SINE Alu 1 297 -15 708 160 0 0 chr20 35690056 35690162 -36463720 + FLAM_C SINE Alu 2 107 -36 570 98 0 0 chr20 35690162 35690244 -36463638 + (GA)n Simple_repeat Simple_repeat 1 82 0 758 175 0 29 chr20 35690271 35690408 -36463474 - AluJo SINE Alu -166 146 14 1214 255 40 40 chr20 35690412 35690785 -36463097 - MLT1E LTR MaLR 0 593 221 379 305 0 9 chr20 35690853 35690958 -36462924 + MIR SINE MIR 70 173 -89 2174 112 23 10 chr20 35691023 35691327 -36462555 - AluSx SINE Alu -4 308 1 842 92 46 23 chr20 35691947 35692077 -36461805 + FLAM_C SINE Alu 1 133 0 351 294 53 7 chr20 35692350 35692496 -36461386 - MIR3 SINE MIR -27 181 26 306 0 0 0 chr20 35692496 35692530 -36461352 + (CA)n Simple_repeat Simple_repeat 2 35 0 2037 125 44 0 chr20 35692583 35692879 -36461003 - AluSx SINE Alu -1 311 3 257 280 24 7 chr20 35693001 35693090 -36460792 + MIR SINE MIR 105 195 -13 2294 94 0 13 chr20 35693320 35693627 -36460255 - AluSx SINE Alu -9 303 1 1532 179 107 0 chr20 35693885 35694165 -36459717 - AluSx SINE Alu -2 310 1 430 219 0 88 chr20 35694257 35694371 -36459511 + MIR3 SINE MIR 81 184 -24 2701 46 0 0 chr20 35694677 35694983 -36458899 - AluY SINE Alu -5 306 1 360 295 120 73 chr20 35695030 35695270 -36458612 - L2 LINE L2 -25 3247 3020 1573 184 50 4 chr20 35695270 35695547 -36458335 - AluJo SINE Alu -22 290 1 360 295 120 73 chr20 35695547 35695890 -36457992 - L2 LINE L2 -252 3020 2637 2285 71 7 3 chr20 35696087 35696381 -36457501 + AluY SINE Alu 2 296 -15 403 214 214 8 chr20 35696615 35696746 -36457136 - MIR3 SINE MIR -7 201 44 675 217 116 16 chr20 35696794 35697011 -36456871 + MIR SINE MIR 15 257 -5 218 31 0 31 chr20 35697740 35697772 -36456110 + (GGGGA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr20 35698149 35698173 -36455709 + GC_rich Low_complexity Low_complexity 1 24 0 229 310 28 0 chr20 35698667 35698738 -36455144 - MIR SINE MIR -62 146 74 269 293 50 36 chr20 35699471 35699611 -36454271 + MIR3 SINE MIR 8 149 -59 212 211 0 96 chr20 35699610 35699662 -36454220 + L2 LINE L2 3218 3264 -8 * 248 305 79 55 chr20 35699805 35699969 -36453913 + MIR3 SINE MIR 30 197 -11 968 241 36 5 chr20 35701116 35701340 -36452542 + MIR SINE MIR 2 232 -30 1552 105 149 0 chr20 35701356 35701614 -36452268 - AluSx SINE Alu -26 286 1 239 316 40 0 chr20 35701658 35701734 -36452148 + L2 LINE L2 2976 3054 -218 368 157 22 90 chr20 35701777 35701866 -36452016 - MIR SINE MIR 0 262 180 583 276 20 0 chr20 35701947 35702099 -36451783 - MIR SINE MIR -64 198 44 225 0 0 0 chr20 35702714 35702739 -36451143 + (TG)n Simple_repeat Simple_repeat 1 25 0 33 43 0 0 chr20 35702810 35702857 -36451025 + GC_rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr20 35703619 35703652 -36450230 + GC_rich Low_complexity Low_complexity 1 33 0 29 47 0 0 chr20 35706942 35706985 -36446897 + AT_rich Low_complexity Low_complexity 1 43 0 2162 76 24 0 chr20 35707599 35707888 -36445994 - AluSp SINE Alu -17 296 1 2013 109 13 10 chr20 35709488 35709790 -36444092 + AluSx SINE Alu 1 303 -9 1537 150 19 64 chr20 35710022 35710336 -36443546 + AluJo SINE Alu 1 300 -12 2155 117 3 0 chr20 35710722 35711029 -36442853 + AluSp SINE Alu 1 308 -5 233 291 0 25 chr20 35711832 35711911 -36441971 + L2 LINE L2 2329 2405 -909 1912 134 7 0 chr20 35712069 35712359 -36441523 - AluSx SINE Alu -20 292 1 1916 128 7 0 chr20 35712902 35713192 -36440690 + AluSx SINE Alu 1 292 -20 349 118 0 0 chr20 35713278 35713329 -36440553 + Alu SINE Alu 246 296 -6 357 176 9 148 chr20 35714542 35714650 -36439232 + MER21B LTR ERV1 1 83 -780 515 128 0 0 chr20 35714681 35714759 -36439123 + MER21B LTR ERV1 239 316 -547 261 0 0 0 chr20 35714792 35714821 -36439061 + (A)n Simple_repeat Simple_repeat 1 29 0 459 216 35 111 chr20 35714829 35715000 -36438882 + MER21B LTR ERV1 304 461 -402 1922 130 92 25 chr20 35715003 35715318 -36438564 - MER1B DNA MER1_type -1 336 1 1979 147 3 0 chr20 35715331 35715637 -36438245 + AluJo SINE Alu 5 311 -1 2186 120 0 0 chr20 35715652 35715982 -36437900 + AluSx SINE Alu 1 312 0 1582 157 8 8 chr20 35715990 35716257 -36437625 + AluJo SINE Alu 40 306 -6 1752 141 0 64 chr20 35716258 35716584 -36437298 + AluSx SINE Alu 2 306 -6 1844 161 45 24 chr20 35716596 35716931 -36436951 + MER21B LTR ERV1 470 811 -52 378 336 84 62 chr20 35718146 35718345 -36435537 + L2 LINE L2 2986 3194 -78 2243 101 0 0 chr20 35718345 35718642 -36435240 - AluSx SINE Alu -15 297 1 378 336 84 62 chr20 35718642 35718716 -36435166 + L2 LINE L2 3194 3265 -7 383 295 16 16 chr20 35718717 35718839 -36435043 - L2 LINE L2 -2 3311 3190 203 332 129 28 chr20 35718957 35719174 -36434708 - L2 LINE L2 -338 2976 2738 681 310 164 26 chr20 35719174 35719712 -36434170 - L2 LINE L2 -726 2588 1977 594 284 202 15 chr20 35719726 35720057 -36433825 - L2 LINE L2 -1715 1599 1207 2150 108 3 0 chr20 35720057 35720353 -36433529 + AluSx SINE Alu 1 297 -15 1002 170 12 0 chr20 35720364 35720529 -36433353 + FRAM SINE Alu 1 167 -9 2061 128 0 3 chr20 35721265 35721578 -36432304 - AluSx SINE Alu 0 312 1 243 308 11 11 chr20 35721861 35721952 -36431930 + L1ME4a LINE L1 5471 5561 -560 1130 177 79 0 chr20 35721952 35722155 -36431727 + MER20 DNA MER1_type 1 219 0 592 267 145 13 chr20 35722158 35722476 -36431406 + L1ME4a LINE L1 5612 5971 -150 2120 118 0 0 chr20 35722499 35722804 -36431078 - AluSx SINE Alu -7 305 1 337 247 51 95 chr20 35722850 35723008 -36430874 + L1ME4a LINE L1 5967 6117 -4 360 0 0 0 chr20 35723088 35723128 -36430754 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 211 306 22 142 chr20 35723137 35723320 -36430562 + L2 LINE L2 3022 3182 -90 1600 148 9 69 chr20 35723623 35723940 -36429942 - AluJo SINE Alu -14 298 1 1791 150 27 7 chr20 35724266 35724560 -36429322 - AluJb SINE Alu -12 300 1 2192 113 0 0 chr20 35724571 35724873 -36429009 - AluSx SINE Alu -10 302 1 774 242 56 60 chr20 35724920 35725172 -36428710 + MIR SINE MIR 10 260 -2 188 143 122 20 chr20 35725157 35725206 -36428676 + MIR SINE MIR 138 191 -71 * 1850 127 33 0 chr20 35725307 35725582 -36428300 + AluSx SINE Alu 7 290 -22 229 255 106 32 chr20 35726807 35726901 -36426981 + L2 LINE L2 3005 3105 -167 719 306 60 0 chr20 35726987 35727203 -36426679 + MIR SINE MIR 34 262 0 904 112 0 0 chr20 35727298 35727432 -36426450 + AluSc SINE Alu 174 307 -2 1922 114 35 0 chr20 35727628 35727917 -36425965 - AluSx SINE Alu -13 299 1 1403 175 61 11 chr20 35727919 35728199 -36425683 - AluJb SINE Alu -18 294 1 2016 96 17 3 chr20 35728209 35728501 -36425381 - AluSp SINE Alu -17 296 1 2243 94 7 0 chr20 35728917 35729226 -36424656 + AluY SINE Alu 1 311 0 224 300 69 46 chr20 35730714 35730844 -36423038 + L2 LINE L2 3181 3313 0 252 323 0 0 chr20 35730854 35730916 -36422966 - L2 LINE L2 0 3272 3211 1724 173 0 13 chr20 35731450 35731756 -36422126 - AluJb SINE Alu -10 302 1 383 329 63 29 chr20 35732223 35732430 -36421452 - MIR SINE MIR -29 233 20 686 299 88 13 chr20 35732776 35733006 -36420876 - MIR SINE MIR 0 262 16 218 328 17 0 chr20 35733224 35733282 -36420600 + MIR SINE MIR 88 146 -62 2112 106 3 0 chr20 35733423 35733716 -36420166 - AluSx SINE Alu -18 294 1 213 39 0 0 chr20 35736714 35736740 -36417142 + (CTG)n Simple_repeat Simple_repeat 1 26 0 341 191 0 127 chr20 35738670 35738796 -36415086 - MER102b DNA MER1_type 0 341 232 1745 144 41 17 chr20 35739806 35740098 -36413784 - AluJb SINE Alu -13 299 1 198 0 0 0 chr20 35740484 35740506 -36413376 + (A)n Simple_repeat Simple_repeat 1 22 0 518 269 37 8 chr20 35741427 35741561 -36412321 - MIR3 SINE MIR -11 197 60 26 0 0 0 chr20 35741743 35741769 -36412113 + AT_rich Low_complexity Low_complexity 1 26 0 933 204 159 28 chr20 35742538 35742890 -36410992 + L1MC5 LINE L1 7516 7913 -48 850 164 0 14 chr20 35744429 35744568 -36409314 + AluSc SINE Alu 144 282 -27 180 0 0 0 chr20 35744568 35744588 -36409294 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2731 19 0 0 chr20 35744641 35744952 -36408930 + AluYb8 SINE Alu 1 311 -7 1744 128 80 0 chr20 35745421 35745709 -36408173 - AluSx SINE Alu -1 311 1 592 296 71 16 chr20 35745927 35746180 -36407702 - L2 LINE L2 0 3313 3047 1793 121 54 3 chr20 35746199 35746497 -36407385 + AluSq SINE Alu 1 313 0 2094 107 0 13 chr20 35746601 35746899 -36406983 - AluSx SINE Alu -18 294 1 2184 104 3 3 chr20 35746933 35747242 -36406640 + AluSg SINE Alu 2 310 0 781 209 105 38 chr20 35747837 35748047 -36405835 + MER58A DNA MER1_type 1 224 0 2290 93 0 3 chr20 35749276 35749589 -36404293 - AluSx SINE Alu 0 312 1 507 123 0 0 chr20 35751445 35751526 -36402356 + (CTG)n Simple_repeat Simple_repeat 1 81 0 575 257 47 0 chr20 35751948 35752096 -36401786 + MER103 DNA DNA 12 166 0 1582 140 29 76 chr20 35752578 35752892 -36400990 - AluJo SINE Alu -13 299 1 21 0 0 0 chr20 35752919 35752940 -36400942 + AT_rich Low_complexity Low_complexity 1 21 0 500 290 180 26 chr20 35753101 35753484 -36400398 - L1MC4a LINE L1 -1861 5947 5506 1927 150 3 3 chr20 35753548 35753841 -36400041 + AluJo SINE Alu 1 293 -19 1358 284 106 47 chr20 35754016 35754491 -36399391 - L1MC4a LINE L1 -2459 3687 3241 1588 94 0 5 chr20 35754491 35754694 -36399188 + AluSq SINE Alu 1 202 -111 1358 284 106 47 chr20 35754694 35755204 -36398678 - L1MC4a LINE L1 -2905 3241 2762 2309 109 0 0 chr20 35755204 35755506 -36398376 - AluSg SINE Alu -8 302 1 1358 284 106 47 chr20 35755506 35755979 -36397903 - L1MC4a LINE L1 -3384 2762 2143 992 257 97 56 chr20 35756285 35757064 -36396818 - L1MEd LINE L1 -745 1745 830 237 301 11 32 chr20 35757085 35757178 -36396704 - L1MEd LINE L1 -5408 711 621 489 298 140 14 chr20 35757322 35757607 -36396275 - L1MEd LINE L1 -5677 442 122 2434 77 0 0 chr20 35757639 35757939 -36395943 - AluY SINE Alu -11 300 1 2129 98 31 0 chr20 35757964 35758251 -36395631 + AluSx SINE Alu 1 296 -16 1923 142 6 29 chr20 35758384 35758695 -36395187 + AluSx SINE Alu 1 304 -8 2068 72 76 34 chr20 35758723 35759014 -36394868 + AluY SINE Alu 1 303 -8 244 316 44 44 chr20 35759022 35759136 -36394746 + L3 LINE CR1 1420 1533 -44 1321 160 9 14 chr20 35759140 35759352 -36394530 + MER20 DNA MER1_type 5 215 -4 1134 135 65 25 chr20 35759882 35760006 -36393876 + AluJb SINE Alu 1 137 -175 183 42 0 0 chr20 35760006 35760030 -36393852 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1134 135 65 25 chr20 35760030 35760105 -36393777 + AluJb SINE Alu 137 208 -104 217 296 0 0 chr20 35760331 35760375 -36393507 - MIR SINE MIR -140 68 25 294 299 84 0 chr20 35760698 35760805 -36393077 - MIR SINE MIR -99 163 48 2250 107 3 0 chr20 35760849 35761148 -36392734 - AluSx SINE Alu -12 300 1 330 254 132 35 chr20 35761335 35761449 -36392433 + MIR SINE MIR 16 140 -68 282 324 108 0 chr20 35761681 35761792 -36392090 + L2 LINE L2 3143 3265 -7 197 33 33 0 chr20 35762443 35762473 -36391409 + (TG)n Simple_repeat Simple_repeat 2 32 0 896 191 0 12 chr20 35762749 35762911 -36390971 - FRAM SINE Alu -18 158 1 2383 91 0 0 chr20 35762920 35763216 -36390666 - AluSx SINE Alu -16 296 1 2167 89 46 0 chr20 35763597 35763877 -36390005 - AluSc SINE Alu -16 293 1 588 270 35 77 chr20 35764119 35764185 -36389697 + L2 LINE L2 2712 2779 -534 2228 104 3 0 chr20 35764185 35764482 -36389400 - AluSx SINE Alu -14 298 1 588 270 35 77 chr20 35764482 35764531 -36389351 + L2 LINE L2 2779 2829 -484 1201 175 86 60 chr20 35764531 35764682 -36389200 - MER33 DNA MER1_type -2262 323 177 1753 144 0 56 chr20 35764682 35764987 -36388895 - AluJo SINE Alu -24 288 1 1201 175 86 60 chr20 35764987 35765149 -36388733 - MER33 DNA MER1_type -2408 177 2 588 270 35 77 chr20 35765149 35765399 -36388483 + L2 LINE L2 2829 3067 -246 317 189 32 147 chr20 35765530 35765595 -36388287 - MER94 DNA DNA -41 93 41 1679 171 49 11 chr20 35765595 35765881 -36388001 + AluJb SINE Alu 1 297 -15 317 189 32 147 chr20 35765881 35765910 -36387972 - MER94 DNA DNA -93 41 10 232 273 0 18 chr20 35765936 35765991 -36387891 + L2 LINE L2 3257 3310 -3 1070 216 9 9 chr20 35766591 35766809 -36387073 + MER58A DNA MER1_type 2 219 -5 650 137 0 0 chr20 35767001 35767096 -36386786 - AluSp/q SINE Alu -7 306 212 2023 117 4 0 chr20 35767102 35767376 -36386506 - AluSx SINE Alu -37 275 1 338 305 101 73 chr20 35768497 35768858 -36385024 - L2 LINE L2 -181 3091 2725 258 81 0 0 chr20 35768858 35768895 -36384987 + (TG)n Simple_repeat Simple_repeat 1 37 0 338 305 101 73 chr20 35768895 35768957 -36384925 - L2 LINE L2 -547 2725 2666 2115 96 68 0 chr20 35768963 35769255 -36384627 + AluSx SINE Alu 1 312 0 720 211 16 0 chr20 35769382 35769510 -36384372 + FLAM_A SINE Alu 1 130 -3 562 318 61 0 chr20 35770121 35770319 -36383563 + MIR SINE MIR 21 230 -32 2262 104 0 0 chr20 35770402 35770691 -36383191 + AluSg SINE Alu 14 302 -8 3799 153 41 83 chr20 35770698 35770877 -36383005 + L1MB3 LINE L1 5342 5527 -656 2174 105 0 29 chr20 35770877 35771183 -36382699 + AluSx SINE Alu 2 298 -14 3799 153 41 83 chr20 35771183 35771476 -36382406 + L1MB3 LINE L1 5527 5831 -352 2190 86 14 0 chr20 35771476 35771754 -36382128 - AluSc SINE Alu -27 282 1 3799 153 41 83 chr20 35771754 35771984 -36381898 + L1MB3 LINE L1 5831 6069 -114 2434 78 0 0 chr20 35771984 35772278 -36381604 - AluSc SINE Alu -15 294 1 3799 153 41 83 chr20 35772278 35772312 -36381570 + L1MB3 LINE L1 6069 6103 -80 1908 49 0 4 chr20 35772312 35772537 -36381345 + AluY SINE Alu 84 307 -4 3799 153 41 83 chr20 35772537 35772674 -36381208 + L1MB3 LINE L1 6103 6181 -2 2008 152 0 10 chr20 35772781 35773091 -36380791 + AluJb SINE Alu 1 307 -5 496 269 90 19 chr20 35773432 35773588 -36380294 - MIR3 SINE MIR -9 199 33 2189 102 27 0 chr20 35773904 35774198 -36379684 - AluSx SINE Alu -6 306 5 1961 164 0 3 chr20 35774201 35774506 -36379376 - AluJo SINE Alu -8 304 1 717 268 102 75 chr20 35774923 35775255 -36378627 - MER102b DNA MER1_type 0 341 1 349 267 30 0 chr20 35775297 35775398 -36378484 - MIR3 SINE MIR 0 208 105 28 48 0 0 chr20 35776032 35776074 -36377808 + AT_rich Low_complexity Low_complexity 1 42 0 2116 120 3 3 chr20 35776552 35776844 -36377038 + AluSx SINE Alu 1 292 -20 189 0 0 0 chr20 35777175 35777196 -36376686 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1817 144 4 4 chr20 35777196 35777466 -36376416 - AluSx SINE Alu -32 280 11 1829 169 20 10 chr20 35777776 35778078 -36375804 - AluJb SINE Alu -7 305 1 1373 188 8 4 chr20 35778099 35778349 -36375533 + AluJo SINE Alu 49 299 -13 2323 115 0 0 chr20 35778351 35778664 -36375218 + AluSq SINE Alu 1 313 0 710 144 22 72 chr20 35778867 35779006 -36374876 + FLAM_C SINE Alu 2 133 0 4116 143 16 28 chr20 35779519 35780273 -36373609 - L1P LINE L1 -2630 3516 2772 2743 123 16 5 chr20 35780277 35780708 -36373174 + L1P LINE L1 4892 5327 -819 315 234 13 13 chr20 35780713 35780790 -36373092 + L2 LINE L2 2634 2710 -604 1744 189 0 10 chr20 35780794 35781095 -36372787 + AluJb SINE Alu 1 298 -14 1014 167 50 22 chr20 35781197 35781419 -36372463 - MER66A LTR ERV1 0 478 251 1719 150 4 4 chr20 35781420 35781680 -36372202 - AluSx SINE Alu -13 299 40 390 109 0 31 chr20 35781727 35781791 -36372091 - Alu SINE Alu -3 298 237 1029 73 0 0 chr20 35781792 35781916 -36371966 - AluSq/x SINE Alu -189 124 1 1609 162 11 8 chr20 35781916 35782181 -36371701 - MER66B LTR ERV1 -220 266 1 2077 73 23 0 chr20 35782236 35782519 -36371363 + AluSp SINE Alu 21 309 0 1520 178 0 64 chr20 35783043 35783357 -36370525 + AluJb SINE Alu 1 294 -18 891 119 8 15 chr20 35783505 35783639 -36370243 + AluSq/x SINE Alu 1 133 -179 2563 157 31 38 chr20 35783662 35783884 -36369998 + L1MB5 LINE L1 5688 5910 -264 2173 99 0 3 chr20 35783884 35784207 -36369675 - AluY SINE Alu 0 322 1 2147 111 0 3 chr20 35784215 35784503 -36369379 - AluSx SINE Alu -25 287 1 2563 157 31 38 chr20 35784503 35784748 -36369134 + L1MB5 LINE L1 5917 6162 -12 180 0 0 0 chr20 35786125 35786145 -36367737 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2132 118 7 16 chr20 35786329 35786635 -36367247 - AluJb SINE Alu -9 303 1 914 193 0 0 chr20 35787034 35787184 -36366698 + FRAM SINE Alu 6 155 -21 1707 225 104 52 chr20 35787428 35787692 -36366190 + L1MC4a LINE L1 5314 5563 -2245 985 234 0 0 chr20 35787692 35787859 -36366023 + FAM SINE Alu 1 167 -8 1707 225 104 52 chr20 35787859 35788274 -36365608 + L1MC4a LINE L1 5563 6029 -1779 660 218 81 16 chr20 35788267 35788478 -36365404 + L1MC4 LINE L1 6779 7002 -806 * 1405 249 72 96 chr20 35788611 35789556 -36364326 + L1MC4 LINE L1 7099 8022 -20 2163 124 7 3 chr20 35789556 35789862 -36364020 - AluJo SINE Alu -5 307 1 1405 249 72 96 chr20 35789862 35789883 -36363999 + L1MC4 LINE L1 8022 8042 0 1547 183 0 11 chr20 35789891 35790153 -36363729 + AluJb SINE Alu 3 261 -51 802 173 82 121 chr20 35790158 35790389 -36363493 + AluJo SINE Alu 76 297 -15 242 231 94 51 chr20 35790394 35790511 -36363371 + L1MC4a LINE L1 6043 6164 -1644 20177 128 34 64 chr20 35790686 35791158 -36362724 + L1M1 LINE L1 603 1088 -6477 1914 127 0 22 chr20 35791158 35791433 -36362449 + AluSx SINE Alu 1 269 -43 20177 128 34 64 chr20 35791433 35795235 -36358647 + L1M1 LINE L1 1088 4902 -2663 1341 101 22 6 chr20 35795235 35795438 -36358444 + AluSc SINE Alu 99 304 0 20177 128 34 64 chr20 35795438 35795735 -36358147 + L1M1 LINE L1 4902 5207 -2358 1064 95 7 0 chr20 35795737 35795874 -36358008 + AluSq/x SINE Alu 1 138 -175 2277 98 0 3 chr20 35795874 35796171 -36357711 + AluSc SINE Alu 3 298 -11 27 29 0 0 chr20 35796274 35796308 -36357574 + AT_rich Low_complexity Low_complexity 1 34 0 1540 150 60 50 chr20 35796362 35796662 -36357220 - AluJb SINE Alu -8 304 2 2055 148 3 0 chr20 35796738 35797048 -36356834 + AluSx SINE Alu 1 311 -1 292 246 0 0 chr20 35797197 35797266 -36356616 + L1ME LINE L1 5637 5705 -416 1791 121 60 11 chr20 35797269 35797551 -36356331 + AluSx SINE Alu 4 299 -13 1230 172 23 28 chr20 35797560 35797608 -36356274 + AluJb SINE Alu 86 133 -179 2034 125 4 0 chr20 35797608 35797887 -36355995 + AluSx SINE Alu 1 280 -32 216 0 0 0 chr20 35797887 35797911 -36355971 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1230 172 23 28 chr20 35797911 35798076 -36355806 + AluJb SINE Alu 131 299 -13 33 0 0 0 chr20 35798193 35798226 -36355656 + AT_rich Low_complexity Low_complexity 1 33 0 5612 127 60 34 chr20 35798260 35798596 -36355286 - L1MA5 LINE L1 -6 6294 5968 1820 171 7 13 chr20 35798596 35798895 -36354987 - AluSx SINE Alu -15 297 1 5612 127 60 34 chr20 35798895 35799238 -36354644 - L1MA5 LINE L1 -332 5968 5635 2117 113 3 23 chr20 35799238 35799538 -36354344 - AluSg SINE Alu -16 294 1 5612 127 60 34 chr20 35799538 35800483 -36353399 - L1MA5 LINE L1 -665 5635 4628 1454 234 57 30 chr20 35800491 35801035 -36352847 + MLT1E LTR MaLR 1 588 -5 2410 84 0 0 chr20 35801078 35801377 -36352505 - AluY SINE Alu -12 299 1 490 147 0 112 chr20 35801377 35801420 -36352462 - FLAM_A SINE Alu -169 142 96 2235 109 3 0 chr20 35801420 35801723 -36352159 + AluSx SINE Alu 1 304 -8 490 147 0 112 chr20 35801723 35801795 -36352087 - FLAM_A SINE Alu -215 96 40 672 170 21 103 chr20 35801964 35801989 -36351893 + MER5B DNA MER1_type 1 26 -152 2328 93 3 0 chr20 35801989 35802290 -36351592 - AluSp SINE Alu -11 302 1 672 170 21 103 chr20 35802290 35802458 -36351424 + MER5B DNA MER1_type 26 178 0 2018 110 7 3 chr20 35803237 35803527 -36350355 + AluSx SINE Alu 1 291 -21 262 185 148 0 chr20 35803637 35803718 -36350164 + L1ME3A LINE L1 6068 6160 -10 2258 57 40 3 chr20 35804096 35804394 -36349488 - AluY SINE Alu 0 311 3 278 297 60 76 chr20 35804529 35804714 -36349168 + MIR3 SINE MIR 6 187 -21 315 0 0 0 chr20 35804754 35804789 -36349093 + (TA)n Simple_repeat Simple_repeat 1 35 0 185 254 146 0 chr20 35805164 35805219 -36348663 - L2 LINE L2 0 3272 3210 2149 99 0 16 chr20 35805520 35805832 -36348050 + AluSc SINE Alu 1 307 -2 869 138 0 14 chr20 35806286 35806424 -36347458 + AluJo SINE Alu 1 136 -176 1927 129 3 16 chr20 35806425 35806734 -36347148 + AluSq SINE Alu 1 305 -8 2090 121 3 0 chr20 35806736 35807034 -36346848 + AluSq SINE Alu 1 299 -14 316 235 52 26 chr20 35807047 35807200 -36346682 + L1MC5 LINE L1 7603 7759 -202 529 276 161 43 chr20 35807425 35807601 -36346281 + L1ME4a LINE L1 5537 5691 -430 1977 127 0 43 chr20 35807601 35807925 -36345957 + AluSg SINE Alu 1 310 0 529 276 161 43 chr20 35807925 35808072 -36345810 + L1ME4a LINE L1 5691 5905 -216 2136 107 0 3 chr20 35808145 35808444 -36345438 - AluSx SINE Alu -14 298 1 1409 158 40 29 chr20 35808650 35808928 -36344954 + AluJo SINE Alu 1 281 -31 30 0 0 0 chr20 35808928 35808958 -36344924 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr20 35809740 35809763 -36344119 + AT_rich Low_complexity Low_complexity 1 23 0 1347 134 82 52 chr20 35809789 35810058 -36343824 + MLT1C LTR MaLR 1 277 -190 1186 138 0 0 chr20 35810066 35810240 -36343642 - AluSx SINE Alu -126 186 13 793 145 0 0 chr20 35810240 35810384 -36343498 + AluSg/x SINE Alu 169 312 0 2035 118 0 34 chr20 35810391 35810714 -36343168 + AluSx SINE Alu 1 312 0 473 293 20 16 chr20 35811537 35811740 -36342142 + MIR SINE MIR 5 238 -24 865 211 12 6 chr20 35811741 35811902 -36341980 + AluJo SINE Alu 117 278 -34 216 0 0 0 chr20 35811912 35811936 -36341946 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 35811982 35812012 -36341870 + AT_rich Low_complexity Low_complexity 1 30 0 185 250 29 59 chr20 35812312 35812380 -36341502 + L2 LINE L2 3193 3258 -14 423 285 222 50 chr20 35812824 35813045 -36340837 - Charlie8 DNA MER1_type -2158 259 1 767 194 147 0 chr20 35813281 35813451 -36340431 - MIR SINE MIR -4 258 64 436 239 22 14 chr20 35813482 35813620 -36340262 + L1M4 LINE L1 4873 5011 -1135 1568 136 77 4 chr20 35813667 35813940 -36339942 + AluJb SINE Alu 1 293 -19 455 231 96 91 chr20 35813954 35814041 -36339841 + L1M4 LINE L1 5122 5207 -939 2203 113 0 0 chr20 35814041 35814342 -36339540 + AluSx SINE Alu 1 301 -11 455 231 96 91 chr20 35814342 35814462 -36339420 + L1M4 LINE L1 5207 5330 -816 986 217 60 28 chr20 35814714 35814931 -36338951 - MER58A DNA MER1_type 0 224 1 2485 55 0 0 chr20 35815130 35815437 -36338445 - AluY SINE Alu -2 309 3 200 376 76 42 chr20 35815597 35815927 -36337955 + L2 LINE L2 2545 2885 -429 524 335 62 77 chr20 35815956 35816281 -36337601 + L2 LINE L2 2951 3270 -2 1702 210 63 9 chr20 35816315 35816744 -36337138 + Charlie4a DNA MER1_type 3 454 -54 891 98 0 0 chr20 35816788 35816910 -36336972 + AluJb SINE Alu 1 122 -190 231 36 0 0 chr20 35816913 35816941 -36336941 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 1396 141 85 35 chr20 35817253 35817536 -36336346 - AluJb SINE Alu -15 297 1 237 203 128 83 chr20 35817859 35817992 -36335890 + MIR3 SINE MIR 54 192 -16 368 240 153 89 chr20 35818665 35818978 -36334904 + L1M2 LINE L1 798 1130 -5719 21 36 0 0 chr20 35819028 35819056 -36334826 + GC_rich Low_complexity Low_complexity 1 28 0 233 222 42 0 chr20 35819087 35819159 -36334723 + (TCCG)n Simple_repeat Simple_repeat 1 75 0 242 89 44 0 chr20 35819220 35819265 -36334617 + GA-rich Low_complexity Low_complexity 1 47 0 335 256 186 8 chr20 35819466 35819595 -36334287 + MIR SINE MIR 81 232 -30 4294 83 29 68 chr20 35819874 35820076 -36333806 - L1MA3 LINE L1 0 6305 6097 2211 86 0 13 chr20 35820076 35820390 -36333492 - AluSg SINE Alu 0 310 1 4294 83 29 68 chr20 35820390 35820577 -36333305 - L1MA3 LINE L1 -208 6097 5904 2071 114 3 0 chr20 35820577 35820874 -36333008 + AluSx SINE Alu 1 298 -14 4294 83 29 68 chr20 35820874 35821215 -36332667 - L1MA3 LINE L1 -401 5904 5603 238 229 42 0 chr20 35821237 35821285 -36332597 + MIR SINE MIR 104 153 -55 193 239 22 0 chr20 35821392 35821438 -36332444 - L2 LINE L2 -5 3308 3262 * 850 337 114 25 chr20 35821428 35821574 -36332308 + L2 LINE L2 2605 2737 -535 1740 164 7 10 chr20 35821574 35821707 -36332175 + AluJb SINE Alu 1 133 -179 1736 159 3 16 chr20 35821707 35822016 -36331866 + AluJb SINE Alu 1 305 -7 1740 164 7 10 chr20 35822016 35822180 -36331702 + AluJb SINE Alu 133 297 -15 850 337 114 25 chr20 35822180 35822216 -36331666 + L2 LINE L2 2737 2768 -504 2415 41 3 0 chr20 35822216 35822511 -36331371 + AluY SINE Alu 1 296 -15 850 337 114 25 chr20 35822511 35822941 -36330941 + L2 LINE L2 2768 3272 0 894 186 38 107 chr20 35823116 35823333 -36330549 - L1ME3 LINE L1 -6 6156 5962 2246 60 42 0 chr20 35823333 35823617 -36330265 - AluY SINE Alu -15 296 1 894 186 38 107 chr20 35823617 35823690 -36330192 - L1ME3 LINE L1 -200 5962 5886 1640 136 3 81 chr20 35823867 35823922 -36329960 + L1MB3 LINE L1 5270 5328 -846 1765 181 0 0 chr20 35823922 35824214 -36329668 + AluJo SINE Alu 1 292 -20 1640 136 3 81 chr20 35824214 35824365 -36329517 + L1MB3 LINE L1 5328 5489 -685 1863 143 0 3 chr20 35824365 35824658 -36329224 - AluSx SINE Alu -20 292 1 1640 136 3 81 chr20 35824658 35824747 -36329135 + L1MB3 LINE L1 5489 5538 -636 2102 114 7 0 chr20 35824747 35825054 -36328828 - AluSx SINE Alu -3 309 1 1640 136 3 81 chr20 35825054 35825120 -36328762 + L1MB3 LINE L1 5538 5608 -566 730 144 0 0 chr20 35825120 35825231 -36328651 + FLAM_A SINE Alu 16 126 -16 433 153 0 6 chr20 35825232 35825314 -36328568 + L1MB3 LINE L1 5598 5667 -501 916 207 5 45 chr20 35825320 35825542 -36328340 + AluJb SINE Alu 85 297 -15 3054 143 27 8 chr20 35825543 35826054 -36327828 + L1MB3 LINE L1 5653 6173 -10 372 235 0 102 chr20 35826292 35826390 -36327492 + MIR SINE MIR 1 88 -174 187 213 106 0 chr20 35826490 35826537 -36327345 + L2 LINE L2 3137 3188 -84 493 293 20 7 chr20 35826555 35826702 -36327180 + MIR SINE MIR 99 247 -15 230 278 0 0 chr20 35827131 35827185 -36326697 + CT-rich Low_complexity Low_complexity 1 54 0 2203 91 0 3 chr20 35827546 35827843 -36326039 - AluSq SINE Alu -17 296 1 431 184 58 11 chr20 35828049 35828136 -36325746 + MER91B DNA MER1_type 40 130 -60 287 274 123 19 chr20 35828135 35828233 -36325649 + MER91B DNA MER1_type 69 180 -10 * 1713 168 0 13 chr20 35828233 35828537 -36325345 + AluJb SINE Alu 1 300 -12 1640 195 174 66 chr20 35828730 35829031 -36324851 - L1ME3A LINE L1 -1 6169 5902 2121 120 0 0 chr20 35829031 35829331 -36324551 - AluJb SINE Alu -12 300 1 1640 195 174 66 chr20 35829331 35829406 -36324476 - L1ME3A LINE L1 -268 5902 5837 1949 112 0 14 chr20 35829406 35829722 -36324160 - AluSx SINE Alu 0 312 1 2315 80 0 3 chr20 35829727 35830026 -36323856 - AluSp SINE Alu -13 300 3 1640 195 174 66 chr20 35830026 35830174 -36323708 - L1ME3A LINE L1 -336 5834 5579 2144 122 0 0 chr20 35830206 35830517 -36323365 + AluSq SINE Alu 1 311 -2 3261 165 31 45 chr20 35830541 35830601 -36323281 - L1MB8 LINE L1 -6 6172 6113 1609 190 3 0 chr20 35830601 35830901 -36322981 + AluJb SINE Alu 1 301 -11 3261 165 31 45 chr20 35830901 35831549 -36322333 - L1MB8 LINE L1 -65 6113 5474 839 144 0 23 chr20 35831567 35831699 -36322183 + FLAM_C SINE Alu 7 135 -8 7901 200 54 34 chr20 35831734 35831866 -36322016 - L1MB8 LINE L1 -707 5473 5345 1969 146 0 0 chr20 35831866 35832161 -36321721 + AluJb SINE Alu 3 297 -15 1687 159 0 7 chr20 35832168 35832471 -36321411 - AluJb SINE Alu 0 301 1 7901 200 54 34 chr20 35832471 35833408 -36320474 - L1MB8 LINE L1 -840 5340 4423 1452 171 91 0 chr20 35833408 35833694 -36320188 - AluJb SINE Alu 0 312 1 7901 200 54 34 chr20 35833694 35834895 -36318987 - L1MB8 LINE L1 -1757 4423 3151 338 203 31 0 chr20 35834895 35834959 -36318923 + MLT1A2 LTR MaLR 309 374 0 321 280 110 42 chr20 35835042 35835310 -36318572 + L1MC4a LINE L1 5737 6030 -91 26 0 0 0 chr20 35835385 35835411 -36318471 + AT_rich Low_complexity Low_complexity 1 26 0 1775 162 3 3 chr20 35835416 35835718 -36318164 + AluJb SINE Alu 1 302 -10 463 232 6 22 chr20 35835719 35835900 -36317982 + GA-rich Low_complexity Low_complexity 3 180 0 229 206 15 15 chr20 35835958 35836026 -36317856 + GA-rich Low_complexity Low_complexity 3 70 0 486 279 61 7 chr20 35836026 35836173 -36317709 + MIR SINE MIR 20 174 -88 2272 30 0 4 chr20 35836275 35836566 -36317316 - AluY SINE Alu 0 306 17 2128 54 12 87 chr20 35836595 35836929 -36316953 + AluY SINE Alu 1 309 -2 870 198 0 47 chr20 35836930 35837102 -36316780 + MER58B DNA MER1_type 178 341 0 528 334 109 28 chr20 35837120 35837432 -36316450 + L2 LINE L2 2885 3237 -76 2345 82 10 0 chr20 35837432 35837738 -36316144 + AluSp SINE Alu 1 309 -4 528 334 109 28 chr20 35837738 35837820 -36316062 + L2 LINE L2 3237 3311 -2 775 231 29 12 chr20 35837906 35838079 -36315803 + MIR SINE MIR 15 190 -72 378 0 0 0 chr20 35838665 35838707 -36315175 + (CCA)n Simple_repeat Simple_repeat 3 44 0 647 258 124 13 chr20 35839079 35839312 -36314570 + MIR SINE MIR 4 262 0 1883 155 0 16 chr20 35839330 35839639 -36314243 + AluJb SINE Alu 1 304 -8 207 100 0 0 chr20 35839640 35839670 -36314212 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 341 280 10 0 chr20 35839699 35839799 -36314083 + L2 LINE L2 2564 2664 -650 1302 242 60 65 chr20 35839799 35839849 -36314033 + L2 LINE L2 2624 2673 -640 2133 96 0 19 chr20 35839849 35840162 -36313720 - AluSp SINE Alu -6 307 1 1302 242 60 65 chr20 35840162 35840777 -36313105 + L2 LINE L2 2673 3312 -1 1210 240 95 43 chr20 35841064 35841362 -36312520 - MER113 DNA MER1_type? -75 446 118 2095 107 3 7 chr20 35841362 35841660 -36312222 + AluSx SINE Alu 1 297 -15 1210 240 95 43 chr20 35841660 35841782 -36312100 - MER113 DNA MER1_type? -403 118 4 363 325 117 0 chr20 35841786 35841974 -36311908 + L2 LINE L2 2882 3091 -181 193 208 57 38 chr20 35842036 35842089 -36311793 + L2 LINE L2 3214 3267 -5 447 256 58 29 chr20 35842224 35842361 -36311521 + MIR SINE MIR 14 154 -108 476 284 267 23 chr20 35842510 35842714 -36311168 + L2 LINE L2 2763 2916 -397 1367 173 47 53 chr20 35842714 35843015 -36310867 - AluJb SINE Alu -11 301 3 476 284 267 23 chr20 35843015 35843246 -36310636 + L2 LINE L2 2916 3312 -1 416 230 44 62 chr20 35843270 35843383 -36310499 - MIR SINE MIR -63 145 34 282 315 19 38 chr20 35843728 35843903 -36309979 - MIR SINE MIR -65 143 21 666 231 164 27 chr20 35843969 35844194 -36309688 + MIR SINE MIR 7 262 0 533 293 0 30 chr20 35844169 35844336 -36309546 - MIR SINE MIR -89 173 12 * 456 267 62 28 chr20 35845375 35845551 -36308331 - MIR3 SINE MIR -3 205 24 214 341 44 44 chr20 35846140 35846231 -36307651 + L2 LINE L2 3090 3180 -92 180 204 61 41 chr20 35846374 35846423 -36307459 + L2 LINE L2 3263 3312 -1 1957 135 17 0 chr20 35846501 35846797 -36307085 - AluSx SINE Alu -11 301 1 238 179 0 0 chr20 35846831 35846870 -36307012 + L2 LINE L2 3270 3308 -5 378 0 0 0 chr20 35846893 35846935 -36306947 + (TG)n Simple_repeat Simple_repeat 2 43 0 963 79 0 0 chr20 35847006 35847132 -36306750 + AluSg/x SINE Alu 175 300 -12 732 264 71 20 chr20 35847245 35847442 -36306440 - MIR SINE MIR -54 208 2 2277 93 0 0 chr20 35847489 35847789 -36306093 - AluSx SINE Alu -12 300 1 410 271 23 15 chr20 35848566 35848695 -36305187 - MIR3 SINE MIR -42 166 33 281 227 30 0 chr20 35848709 35848775 -36305107 - MIR SINE MIR -76 132 65 283 224 171 0 chr20 35848977 35849053 -36304829 - MIR SINE MIR -65 197 109 556 257 105 7 chr20 35849163 35849315 -36304567 - MIR SINE MIR -62 200 34 1747 155 14 0 chr20 35849324 35849342 -36304540 - AluJb SINE Alu -12 300 284 234 0 0 0 chr20 35849342 35849368 -36304514 + (TG)n Simple_repeat Simple_repeat 1 26 0 1747 155 14 0 chr20 35849368 35849645 -36304237 - AluJb SINE Alu -28 284 1 211 308 62 0 chr20 35850629 35850694 -36303188 - MIR SINE MIR -7 255 187 * 271 296 138 6 chr20 35850689 35850848 -36303034 + L2 LINE L2 2782 2961 -353 2121 109 7 7 chr20 35851168 35851470 -36302412 - AluJb SINE Alu -10 302 1 1107 247 67 51 chr20 35851571 35851944 -36301938 + MLT1K LTR MaLR 127 505 -83 340 235 74 12 chr20 35851944 35852025 -36301857 + L2 LINE L2 3185 3270 -2 233 222 74 83 chr20 35851996 35852104 -36301778 - MIR SINE MIR -37 225 119 * 2146 108 3 0 chr20 35852441 35852738 -36301144 + AluSx SINE Alu 1 298 -14 538 214 36 21 chr20 35852741 35852881 -36301001 - L1ME2 LINE L1 -118 6046 5905 183 80 0 0 chr20 35852897 35852922 -36300960 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 1251 158 177 26 chr20 35854190 35854455 -36299427 - AluJo SINE Alu -5 307 3 874 249 75 60 chr20 35855633 35855966 -36297916 - MER102b DNA MER1_type -2 339 2 799 299 42 82 chr20 35857560 35857993 -36295889 - L2 LINE L2 -46 3267 2818 2132 117 0 0 chr20 35857993 35858293 -36295589 + AluSx SINE Alu 3 302 -10 799 299 42 82 chr20 35858293 35858377 -36295505 - L2 LINE L2 -495 2818 2732 2078 118 3 0 chr20 35858377 35858674 -36295208 - AluSq SINE Alu -15 298 1 799 299 42 82 chr20 35858674 35858726 -36295156 - L2 LINE L2 -581 2732 2717 1732 130 0 70 chr20 35858726 35859042 -36294840 - AluJb SINE Alu -18 294 1 799 299 42 82 chr20 35859042 35859121 -36294761 - L2 LINE L2 -596 2717 2636 202 277 101 34 chr20 35859131 35859250 -36294632 + MIR SINE MIR 71 197 -65 840 190 44 0 chr20 35859854 35860012 -36293870 + FAM SINE Alu 2 166 -9 2246 101 0 3 chr20 35860127 35860433 -36293449 - AluSx SINE Alu -7 305 1 327 49 0 0 chr20 35860616 35860657 -36293225 + (TTG)n Simple_repeat Simple_repeat 2 42 0 822 120 0 0 chr20 35860659 35860776 -36293106 - FLAM_C SINE Alu -25 118 2 469 259 123 29 chr20 35860813 35860983 -36292899 - MIR SINE MIR -6 256 71 1607 136 52 42 chr20 35860983 35861292 -36292590 + AluJo SINE Alu 1 312 0 1832 122 24 11 chr20 35861431 35861718 -36292164 - AluSx SINE Alu -21 291 1 257 230 81 27 chr20 35861834 35861908 -36291974 - L2 LINE L2 0 3313 3236 196 277 117 21 chr20 35861969 35862063 -36291819 - L2 LINE L2 -925 2389 2287 1293 246 97 27 chr20 35862193 35862596 -36291286 + MLT1K LTR MaLR 150 580 -8 231 255 0 0 chr20 35862600 35862647 -36291235 - L2 LINE L2 -1022 2292 2246 216 86 0 0 chr20 35862698 35862733 -36291149 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1764 159 0 14 chr20 35862734 35863023 -36290859 - AluJb SINE Alu -26 286 2 454 339 76 26 chr20 35863093 35863474 -36290408 - L2 LINE L2 -656 2658 2259 180 118 118 0 chr20 35863976 35864010 -36289872 - L2 LINE L2 0 3313 3276 1722 113 92 24 chr20 35864031 35864323 -36289559 - AluSx SINE Alu 0 312 1 1960 98 84 0 chr20 35864334 35864620 -36289262 - AluSx SINE Alu -2 310 1 356 279 25 8 chr20 35864632 35864754 -36289128 - L2 LINE L2 -54 3259 3136 235 258 75 32 chr20 35864837 35864930 -36288952 - MIR SINE MIR -74 134 38 228 302 179 32 chr20 35865643 35865895 -36287987 - L3b LINE CR1 -28 1555 1267 400 302 126 13 chr20 35867034 35867193 -36286689 - MER5A DNA MER1_type -6 183 7 775 226 133 0 chr20 35867255 35867450 -36286432 + MIR SINE MIR 30 250 -12 189 0 0 0 chr20 35867451 35867472 -36286410 + (CAT)n Simple_repeat Simple_repeat 1 21 0 2264 102 0 6 chr20 35868839 35869152 -36284730 + AluSx SINE Alu 1 311 -1 256 352 69 25 chr20 35869236 35869395 -36284487 + MIR3 SINE MIR 36 201 -7 2467 64 0 3 chr20 35871088 35871401 -36282481 + AluSx SINE Alu 1 312 0 399 41 0 0 chr20 35871447 35871496 -36282386 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 1527 174 0 10 chr20 35871496 35871789 -36282093 - AluJb SINE Alu -22 290 1 597 282 55 15 chr20 35871876 35872078 -36281804 + MIR SINE MIR 48 257 -5 330 261 14 0 chr20 35872140 35872209 -36281673 - MIR SINE MIR -187 75 6 269 327 61 72 chr20 35872279 35872445 -36281437 + L2 LINE L2 2622 2788 -526 2743 13 0 0 chr20 35872445 35872756 -36281126 - AluY SINE Alu 0 311 1 269 327 61 72 chr20 35872756 35872935 -36280947 + L2 LINE L2 2788 2963 -351 288 0 0 0 chr20 35873049 35873081 -36280801 + (CA)n Simple_repeat Simple_repeat 2 33 0 1051 141 6 0 chr20 35873137 35873300 -36280582 + AluSg/x SINE Alu 133 296 -14 443 284 114 40 chr20 35873415 35873591 -36280291 + MIR SINE MIR 74 262 0 437 282 50 82 chr20 35873598 35873814 -36280068 - L1ME LINE L1 -302 5819 5626 1236 164 69 79 chr20 35873814 35874119 -36279763 + AluJb SINE Alu 1 302 0 437 282 50 82 chr20 35874119 35874343 -36279539 - L1ME LINE L1 -495 5626 5396 263 274 88 35 chr20 35874445 35874558 -36279324 + MIR3 SINE MIR 83 201 -7 2084 113 3 35 chr20 35874570 35874888 -36278994 - AluSx SINE Alu -3 309 2 432 352 89 4 chr20 35874920 35875167 -36278715 + L2 LINE L2 2626 2893 -421 183 262 98 33 chr20 35875214 35875275 -36278607 + L2 LINE L2 2992 3056 -216 * 692 247 46 23 chr20 35875271 35875445 -36278437 + MIR SINE MIR 72 249 -13 510 176 12 0 chr20 35875635 35875720 -36278162 + FLAM_A SINE Alu 13 98 -44 272 222 19 0 chr20 35875721 35875775 -36278107 - L2 LINE L2 -11 3261 3207 2264 75 0 0 chr20 35875894 35876187 -36277695 + AluSg SINE Alu 1 293 -17 492 331 17 23 chr20 35876581 35876756 -36277126 - MIR SINE MIR -69 193 20 709 311 31 9 chr20 35876908 35877136 -36276746 - MIR SINE MIR -29 233 1 547 277 78 0 chr20 35877157 35877323 -36276559 - MIR SINE MIR -80 182 4 1520 156 10 63 chr20 35877478 35877809 -36276073 - AluJb SINE Alu 0 315 1 470 338 33 33 chr20 35877899 35878109 -36275773 + MIR SINE MIR 4 213 -49 854 117 0 71 chr20 35878329 35878470 -36275412 + FLAM_C SINE Alu 1 132 -180 1875 146 0 34 chr20 35878470 35878793 -36275089 + AluJb SINE Alu 1 312 0 854 117 0 71 chr20 35878793 35878805 -36275077 + FLAM_C SINE Alu 132 143 -169 286 135 0 58 chr20 35878981 35879033 -36274849 + MIR3 SINE MIR 112 160 -48 546 261 0 0 chr20 35879112 35879250 -36274632 - MER103 DNA DNA -15 151 14 208 302 48 16 chr20 35879316 35879379 -36274503 + L3 LINE CR1 1509 1573 -4 444 237 253 4 chr20 35879633 35879882 -36274000 - HAL1 LINE L1 -158 2349 2039 2000 126 0 17 chr20 35879889 35880190 -36273692 + AluSx SINE Alu 1 296 -16 566 299 23 17 chr20 35880631 35880805 -36273077 - MIR3 SINE MIR -3 205 31 194 245 0 41 chr20 35880959 35881008 -36272874 - L2 LINE L2 -92 3221 3175 2142 95 0 3 chr20 35881010 35881318 -36272564 + AluSq SINE Alu 1 307 0 2160 100 10 0 chr20 35881341 35881642 -36272240 + AluSx SINE Alu 1 304 -8 860 256 44 32 chr20 35881723 35881973 -36271909 + MIR SINE MIR 2 254 -8 1075 267 177 36 chr20 35882046 35882554 -36271328 - L2 LINE L2 0 3313 2743 601 78 0 0 chr20 35882557 35882634 -36271248 - AluSg SINE Alu -12 298 222 1076 80 0 68 chr20 35882634 35882666 -36271216 - AluSg SINE Alu -155 155 122 2265 91 0 0 chr20 35882666 35882974 -36270908 - AluY SINE Alu -3 308 1 1076 80 0 68 chr20 35882974 35883103 -36270779 - AluSg SINE Alu -188 122 5 1164 250 49 10 chr20 35883110 35883398 -36270484 - L2 LINE L2 -564 2750 2452 353 297 42 17 chr20 35884794 35884912 -36268970 + MIR3 SINE MIR 87 207 -1 218 31 0 31 chr20 35885025 35885057 -36268825 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 203 383 0 0 chr20 35885567 35885661 -36268221 + MIR3 SINE MIR 99 192 -16 239 209 90 0 chr20 35885934 35886001 -36267881 - L3 LINE CR1 -3 1574 1502 545 253 120 0 chr20 35886080 35886238 -36267644 + MIR SINE MIR 58 234 -28 403 256 314 16 chr20 35886486 35886677 -36267205 - L3 LINE CR1 -392 1185 938 261 179 51 0 chr20 35886698 35886776 -36267106 + CT-rich Low_complexity Low_complexity 4 85 0 760 205 0 0 chr20 35886780 35886907 -36266975 - FRAM SINE Alu -38 138 12 1940 129 0 44 chr20 35886921 35887239 -36266643 - AluSq SINE Alu -9 304 1 26 0 0 0 chr20 35887446 35887472 -36266410 + AT_rich Low_complexity Low_complexity 1 26 0 1800 153 3 3 chr20 35887761 35888068 -36265814 + AluSx SINE Alu 2 308 -4 884 153 53 0 chr20 35888068 35888218 -36265664 + AluJb SINE Alu 134 291 -21 180 261 65 0 chr20 35888399 35888439 -36265443 - L2 LINE L2 -2743 571 529 460 310 26 26 chr20 35888439 35888594 -36265288 + MER5B DNA MER1_type 1 155 -23 330 202 61 9 chr20 35888663 35888777 -36265105 - Charlie2a DNA MER1_type -33 2829 2710 640 228 53 0 chr20 35888811 35888982 -36264900 - Charlie2a DNA MER1_type -1212 1650 1471 495 194 28 69 chr20 35889018 35889162 -36264720 - Charlie2b DNA MER1_type -2089 693 556 * 853 208 121 0 chr20 35889159 35889366 -36264516 - Charlie2b DNA MER1_type -2469 313 82 395 392 28 0 chr20 35890117 35890260 -36263622 - L2 LINE L2 0 3272 3126 2053 86 55 0 chr20 35890314 35890606 -36263276 + AluSx SINE Alu 1 308 -4 297 257 76 0 chr20 35890645 35890750 -36263132 + L1M4 LINE L1 4498 4610 -1536 1979 133 30 66 chr20 35890757 35891081 -36262801 - L1MB8 LINE L1 -12 6166 5858 1965 107 7 58 chr20 35891081 35891391 -36262491 + AluSx SINE Alu 1 294 -18 1979 133 30 66 chr20 35891391 35891473 -36262409 - L1MB8 LINE L1 -320 5858 5775 1585 100 5 5 chr20 35891473 35891693 -36262189 - pTR5 LTR ERV1 -2047 391 172 362 255 10 0 chr20 35891696 35891794 -36262088 - LTR30 LTR ERV1 -80 642 544 5714 113 108 64 chr20 35891798 35892921 -36260961 - pTR5 LTR ERV1 -417 2021 742 600 111 0 0 chr20 35892936 35893026 -36260856 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 2263 91 3 3 chr20 35893030 35893339 -36260543 - AluSg SINE Alu -1 309 1 2183 152 11 3 chr20 35893339 35893707 -36260175 - L1MB8 LINE L1 -403 5781 5411 1936 127 3 16 chr20 35893719 35894027 -36259855 - AluSx SINE Alu -8 304 1 765 215 55 0 chr20 35894520 35894683 -36259199 - MER3 DNA MER1_type 0 209 38 243 304 96 9 chr20 35894687 35894802 -36259080 + MIR3 SINE MIR 69 193 -15 733 178 31 0 chr20 35894818 35894947 -36258935 - FLAM_C SINE Alu 0 133 1 306 140 88 0 chr20 35895210 35895267 -36258615 - L3 LINE CR1 -1 1576 1515 210 302 81 35 chr20 35895253 35895339 -36258543 - MER5A DNA MER1_type -7 182 93 * 307 278 227 17 chr20 35895501 35895677 -36258205 - L3 LINE CR1 -107 1470 1258 816 254 120 90 chr20 35895679 35896248 -36257634 - L2 LINE L2 0 3313 2763 1690 166 0 23 chr20 35896248 35896264 -36257618 - AluJo SINE Alu -11 301 286 270 0 0 0 chr20 35896264 35896294 -36257588 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1690 166 0 23 chr20 35896294 35896585 -36257297 - AluJo SINE Alu -26 286 1 816 254 120 90 chr20 35896585 35896613 -36257269 - L2 LINE L2 -550 2763 2737 2083 121 10 0 chr20 35896613 35896910 -36256972 + AluSx SINE Alu 1 300 -12 816 254 120 90 chr20 35896910 35897042 -36256840 - L2 LINE L2 -576 2737 2562 210 325 40 8 chr20 35897043 35897169 -36256713 - L3 LINE CR1 -315 1262 1133 900 158 0 0 chr20 35897308 35897441 -36256441 + FLAM_A SINE Alu 1 133 0 277 270 174 17 chr20 35897493 35897608 -36256274 - L2 LINE L2 -1 3271 3139 912 269 87 26 chr20 35897796 35898189 -36255693 - L2 LINE L2 -244 3069 2654 552 263 44 89 chr20 35898430 35898458 -36255424 + Charlie8 DNA MER1_type 39 67 -2350 1376 196 19 42 chr20 35898458 35898769 -36255113 - AluJb SINE Alu -8 304 1 552 263 44 89 chr20 35898769 35898815 -36255067 + Charlie8 DNA MER1_type 67 113 -2304 2114 50 40 40 chr20 35898815 35899112 -36254770 - AluY SINE Alu -14 297 1 552 263 44 89 chr20 35899112 35899374 -36254508 + Charlie8 DNA MER1_type 113 361 -2056 198 324 110 83 chr20 35899478 35899606 -36254276 + MIR3 SINE MIR 46 180 -28 2382 70 0 0 chr20 35899606 35899905 -36253977 + AluY SINE Alu 1 299 -12 198 324 110 83 chr20 35899905 35899921 -36253961 + MIR3 SINE MIR 180 194 -14 180 0 0 0 chr20 35900093 35900113 -36253769 + (TG)n Simple_repeat Simple_repeat 2 21 0 537 231 25 103 chr20 35900169 35900253 -36253629 - L2 LINE L2 -21 3292 3203 2318 82 0 3 chr20 35900253 35900557 -36253325 + AluSx SINE Alu 1 303 -9 537 231 25 103 chr20 35900557 35900675 -36253207 - L2 LINE L2 -110 3203 3106 1775 135 11 0 chr20 35900678 35900952 -36252930 - AluSx SINE Alu -18 294 18 391 257 119 9 chr20 35901530 35901639 -36252243 + MIR SINE MIR 19 139 -69 708 260 135 3 chr20 35901806 35902092 -36251790 + L2 LINE L2 2761 3072 -241 401 265 256 19 chr20 35902104 35902132 -36251750 + L1MC4a LINE L1 5575 5595 -2213 2137 116 3 0 chr20 35902132 35902434 -36251448 + AluSq SINE Alu 1 303 -10 401 265 256 19 chr20 35902434 35902616 -36251266 + L1MC4a LINE L1 5595 5835 -1973 1540 165 0 67 chr20 35902621 35902948 -36250934 + AluJb SINE Alu 6 310 -2 238 284 0 0 chr20 35903076 35903150 -36250732 + L1MC4a LINE L1 5885 5958 -1850 2164 138 0 0 chr20 35903271 35903569 -36250313 - AluSx SINE Alu -14 298 1 883 148 0 0 chr20 35903572 35903700 -36250182 - AluSp/q SINE Alu -11 302 175 1803 152 14 30 chr20 35903921 35904217 -36249665 + AluJo SINE Alu 3 293 -19 1789 163 3 27 chr20 35904375 35904670 -36249212 - AluJb SINE Alu -12 300 13 880 223 10 39 chr20 35904670 35904739 -36249143 - AluJo SINE Alu -112 200 131 2389 110 0 0 chr20 35904739 35905040 -36248842 - AluSp SINE Alu -12 301 1 880 223 10 39 chr20 35905040 35905176 -36248706 - AluJo SINE Alu -181 131 1 436 279 60 60 chr20 35905203 35905365 -36248517 + L2 LINE L2 3080 3244 -69 2163 131 10 0 chr20 35905365 35905670 -36248212 - AluSx SINE Alu -4 308 1 436 279 60 60 chr20 35905670 35905740 -36248142 + L2 LINE L2 3243 3312 -1 2210 119 3 0 chr20 35905841 35906135 -36247747 - AluSg SINE Alu -15 295 1 331 282 129 32 chr20 35906171 35906295 -36247587 - MER5A DNA MER1_type -44 145 10 189 226 131 36 chr20 35909103 35909136 -36244746 - L2 LINE L2 -48 3224 3196 183 42 0 0 chr20 35909136 35909160 -36244722 + (GGA)n Simple_repeat Simple_repeat 3 26 0 189 226 131 36 chr20 35909160 35909210 -36244672 - L2 LINE L2 -76 3196 3133 377 308 19 0 chr20 35909419 35909523 -36244359 + MIR SINE MIR 49 154 -108 923 229 143 0 chr20 35909774 35909997 -36243885 + MIR SINE MIR 8 262 0 21 0 0 0 chr20 35910243 35910264 -36243618 + AT_rich Low_complexity Low_complexity 1 21 0 2280 109 0 25 chr20 35911289 35911609 -36242273 - AluSx SINE Alu 0 312 1 352 254 85 46 chr20 35911747 35911877 -36242005 - MIR SINE MIR -71 191 57 658 315 75 23 chr20 35912421 35912729 -36241153 - L2 LINE L2 -2 3311 2988 396 0 0 0 chr20 35913129 35913173 -36240709 + (TG)n Simple_repeat Simple_repeat 2 45 0 199 304 0 0 chr20 35913552 35913608 -36240274 - L3 LINE CR1 -193 1384 1329 573 255 67 59 chr20 35915724 35915874 -36238008 + MIR SINE MIR 5 159 -103 2277 112 0 0 chr20 35915874 35916169 -36237713 + AluSq SINE Alu 1 295 -18 573 255 67 59 chr20 35916169 35916273 -36237609 + MIR SINE MIR 159 261 -1 231 259 121 0 chr20 35916331 35916389 -36237493 - MIR SINE MIR -107 101 37 865 272 22 9 chr20 35916553 35916777 -36237105 - MIR SINE MIR -13 249 23 2136 137 46 60 chr20 35917060 35917476 -36236406 - MSTB LTR MaLR -16 410 1 1014 263 156 20 chr20 35917743 35918229 -36235653 - L2 LINE L2 0 3313 2736 2279 96 28 0 chr20 35918229 35918542 -36235340 - AluSg SINE Alu 0 310 1 1014 263 156 20 chr20 35918542 35918638 -36235244 - L2 LINE L2 -577 2736 2654 1761 227 107 14 chr20 35918640 35919125 -36234757 - MLT1F LTR MaLR -12 530 1 264 173 93 27 chr20 35919127 35919202 -36234680 - L2 LINE L2 -656 2658 2579 482 271 29 0 chr20 35919411 35919551 -36234331 + L3 LINE CR1 1051 1194 -383 812 275 61 9 chr20 35920013 35920242 -36233640 - MIR SINE MIR 0 262 22 282 266 21 43 chr20 35922812 35922906 -36230976 - MIR3 SINE MIR -116 92 1 704 308 167 47 chr20 35923336 35923538 -36230344 + L2 LINE L2 2018 2194 -1078 2520 75 0 0 chr20 35923538 35923833 -36230049 + AluSc SINE Alu 1 295 -14 704 308 167 47 chr20 35923833 35924575 -36229307 + L2 LINE L2 2194 3069 -203 189 333 18 0 chr20 35924544 35924601 -36229281 - L2 LINE L2 -82 3190 3133 * 738 229 58 131 chr20 35925970 35926379 -36227503 + L2 LINE L2 2776 3131 -182 2062 130 0 23 chr20 35926379 35926687 -36227195 - AluJb SINE Alu 0 312 12 738 229 58 131 chr20 35926687 35926848 -36227034 + L2 LINE L2 3131 3302 -11 260 385 0 0 chr20 35926851 35926968 -36226914 - L2 LINE L2 -230 3042 2926 193 213 100 62 chr20 35927302 35927382 -36226500 - MIR SINE MIR -117 145 63 2349 98 7 0 chr20 35927449 35927744 -36226138 + AluSq SINE Alu 1 297 -16 2489 87 0 0 chr20 35927829 35928129 -36225753 - AluSx SINE Alu -12 300 1 231 291 107 29 chr20 35928284 35928387 -36225495 - MIR3 SINE MIR -16 192 82 492 276 87 3 chr20 35928508 35928683 -36225199 + MIR SINE MIR 4 203 -59 252 265 0 0 chr20 35928814 35928863 -36225019 - MER63 DNA MER1_type 0 1062 1014 400 295 36 90 chr20 35930780 35931058 -36222824 + L1M4 LINE L1 4488 4750 -1396 2246 111 0 9 chr20 35931395 35931710 -36222172 - AluSx SINE Alu 0 312 1 403 271 0 112 chr20 35932339 35932509 -36221373 + MIR3 SINE MIR 1 151 -57 2345 107 3 0 chr20 35932511 35932810 -36221072 + AluSp SINE Alu 1 300 -13 357 284 158 7 chr20 35933046 35933184 -36220698 + MIR3 SINE MIR 2 156 -78 2366 94 3 3 chr20 35933215 35933522 -36220360 - AluSx SINE Alu -5 307 1 581 186 62 28 chr20 35933570 35933715 -36220167 - MIR SINE MIR -50 212 63 636 275 45 52 chr20 35934003 35934256 -36219626 + MIR SINE MIR 3 247 -15 2402 100 0 0 chr20 35934627 35934928 -36218954 + AluSg SINE Alu 1 301 -9 300 219 0 104 chr20 35935773 35935869 -36218013 + MIR3 SINE MIR 105 190 -18 760 271 79 0 chr20 35936691 35936920 -36216962 + MIR SINE MIR 4 250 -12 467 242 96 121 chr20 35936931 35937212 -36216670 - L3 LINE CR1 -163 1414 1141 217 328 140 38 chr20 35937174 35937360 -36216522 + L2 LINE L2 3025 3229 -84 * 2284 100 62 0 chr20 35938140 35938480 -36215402 - MER46B DNA MER2_type 0 236 1 206 61 0 30 chr20 35938549 35938572 -36215310 + (TA)n Simple_repeat Simple_repeat 2 25 -8 2428 86 0 7 chr20 35938572 35938875 -36215007 - AluSx SINE Alu -11 301 1 206 61 0 30 chr20 35938875 35938884 -36214998 + (TA)n Simple_repeat Simple_repeat 25 33 0 605 278 54 8 chr20 35939210 35939384 -36214498 - MIR3 SINE MIR -8 200 20 738 233 105 24 chr20 35939897 35940107 -36213775 - MIR SINE MIR -6 256 30 2251 126 0 0 chr20 35940647 35940940 -36212942 - AluSx SINE Alu -19 293 1 627 284 150 54 chr20 35940943 35941494 -36212388 - L1MC4a LINE L1 -139 5982 5567 1092 174 12 0 chr20 35941502 35941674 -36212208 - FAM SINE Alu -1 174 1 663 248 40 69 chr20 35942011 35942056 -36211826 - Charlie8 DNA MER1_type -2026 391 346 2546 68 0 0 chr20 35942056 35942352 -36211530 + AluSc SINE Alu 1 296 -13 663 248 40 69 chr20 35942352 35942653 -36211229 - Charlie8 DNA MER1_type -2071 346 55 817 225 197 24 chr20 35943147 35943360 -36210522 + MIR SINE MIR 8 257 -5 362 264 99 8 chr20 35943423 35943544 -36210338 + L2 LINE L2 3136 3267 -5 288 77 0 0 chr20 35943566 35943605 -36210277 + (CA)n Simple_repeat Simple_repeat 1 39 0 218 282 56 0 chr20 35943862 35943933 -36209949 - L2 LINE L2 -10 3262 3188 1950 132 0 14 chr20 35944035 35944316 -36209566 + AluSx SINE Alu 1 277 -35 28 29 0 0 chr20 35944459 35944494 -36209388 + AT_rich Low_complexity Low_complexity 1 35 0 383 321 70 37 chr20 35944528 35944930 -36208952 + L1ME4a LINE L1 5614 6032 -89 619 213 22 0 chr20 35944946 35945082 -36208800 - MIR SINE MIR -41 221 83 444 209 95 9 chr20 35945655 35945760 -36208122 - MIR SINE MIR -64 144 31 260 282 24 24 chr20 35945799 35945884 -36207998 + MIR3 SINE MIR 85 169 -39 * 358 254 65 87 chr20 35945876 35945986 -36207896 - MER5A DNA MER1_type -5 184 76 2212 110 3 3 chr20 35945986 35946286 -36207596 - AluY SINE Alu -11 300 1 358 254 65 87 chr20 35946286 35946313 -36207569 - MER5A DNA MER1_type -113 76 50 361 212 10 10 chr20 35947065 35947164 -36206718 + CT-rich Low_complexity Low_complexity 4 102 0 2371 48 37 3 chr20 35947165 35947459 -36206423 - AluY SINE Alu -7 304 1 258 203 0 31 chr20 35947576 35947640 -36206242 - MIR SINE MIR -97 111 50 202 333 62 0 chr20 35947727 35947808 -36206074 - L2 LINE L2 -1 3271 3186 2413 87 10 0 chr20 35947825 35948135 -36205747 + AluSp SINE Alu 1 313 0 191 276 320 33 chr20 35948165 35948527 -36205355 + L2 LINE L2 2145 2610 -704 215 311 27 0 chr20 35948568 35948642 -36205240 + L2 LINE L2 2905 2980 -292 190 299 62 41 chr20 35948731 35948828 -36205054 + L2 LINE L2 3172 3270 -2 219 296 2 0 chr20 35949605 35949678 -36204204 - MIR SINE MIR -73 135 62 198 290 48 0 chr20 35949706 35949768 -36204114 - MIR SINE MIR -114 94 30 1907 153 3 0 chr20 35950325 35950620 -36203262 + AluSx SINE Alu 1 296 -16 231 345 154 0 chr20 35950763 35950983 -36202899 - L2 LINE L2 -542 2772 2519 2462 88 0 3 chr20 35951037 35951342 -36202540 - AluSq SINE Alu -9 304 1 348 231 102 4 chr20 35951756 35951878 -36202004 - MIR SINE MIR -63 145 38 747 255 211 9 chr20 35951893 35952023 -36201859 + L2 LINE L2 2931 3034 -279 2426 89 0 0 chr20 35952023 35952316 -36201566 - AluSg SINE Alu -17 293 1 747 255 211 9 chr20 35952316 35952503 -36201379 + L2 LINE L2 3034 3312 -1 273 316 140 0 chr20 35952531 35952667 -36201215 - MIR SINE MIR -6 256 102 204 286 0 0 chr20 35952966 35953015 -36200867 + MIR SINE MIR 87 135 -73 2468 87 0 3 chr20 35953018 35953329 -36200553 - AluSg SINE Alu 0 310 1 474 312 48 11 chr20 35953363 35953552 -36200330 - MIR SINE MIR 0 262 67 2500 73 0 0 chr20 35953784 35954087 -36199795 - AluY SINE Alu -8 303 1 225 261 29 0 chr20 35954274 35954343 -36199539 + L2 LINE L2 3197 3267 -5 425 309 59 7 chr20 35954361 35954513 -36199369 - MIR SINE MIR -16 246 87 225 308 0 112 chr20 35954605 35954712 -36199170 - MIR3 SINE MIR -21 187 93 239 301 60 12 chr20 35954761 35954844 -36199038 + L2 LINE L2 3171 3257 -15 3767 136 54 30 chr20 35955037 35955503 -36198379 - L1MB7 LINE L1 -16 6168 5680 1796 137 25 3 chr20 35955503 35955787 -36198095 + AluJo SINE Alu 1 290 -22 3767 136 54 30 chr20 35955787 35955984 -36197898 - L1MB7 LINE L1 -504 5680 5489 596 150 10 0 chr20 35955984 35956084 -36197798 + MER2 DNA MER2_type 8 108 -237 235 262 10 19 chr20 35956076 35956179 -36197703 + MER2 DNA MER2_type 59 160 -185 * 1037 123 26 0 chr20 35956184 35956339 -36197543 - AluJo SINE Alu -12 300 142 2153 92 3 3 chr20 35956368 35956660 -36197222 + AluSx SINE Alu 1 292 -20 885 112 68 0 chr20 35956664 35956825 -36197057 + MER2 DNA MER2_type 174 345 0 1646 169 66 6 chr20 35956831 35957336 -36196546 - L1MB7 LINE L1 -700 5478 4944 447 264 112 63 chr20 35957353 35957842 -36196040 - L1ME3A LINE L1 -202 5968 5428 926 111 0 0 chr20 35958189 35958315 -36195567 + AluJo SINE Alu 1 126 -186 390 211 105 121 chr20 35958494 35958608 -36195274 - MIR SINE MIR 0 262 151 817 156 7 30 chr20 35958608 35958743 -36195139 - AluJo SINE Alu -169 133 2 390 211 105 121 chr20 35958743 35958818 -36195064 - MIR SINE MIR -111 151 76 503 327 135 15 chr20 35959142 35959497 -36194385 - L2 LINE L2 -126 3187 2791 1779 199 60 48 chr20 35959764 35960246 -36193636 + L1MD2 LINE L1 5723 6210 -149 336 138 31 0 chr20 35960258 35960323 -36193559 + L1MD2 LINE L1 6291 6357 -2 911 173 19 0 chr20 35960325 35960481 -36193401 + AluJo SINE Alu 130 288 -24 2252 98 0 0 chr20 35960501 35960798 -36193084 + AluSg SINE Alu 1 297 -13 658 255 13 0 chr20 35961621 35961774 -36192108 - MIR SINE MIR -66 196 42 193 299 65 0 chr20 35961773 35961850 -36192032 - L2 LINE L2 -31 3241 3160 * 538 273 80 16 chr20 35961854 35962041 -36191841 - MIR SINE MIR -1 261 63 326 309 8 79 chr20 35963008 35963093 -36190789 - L1MC4a LINE L1 -1836 5972 5897 2302 89 3 3 chr20 35963093 35963397 -36190485 - AluSx SINE Alu -8 304 1 326 309 8 79 chr20 35963397 35963437 -36190445 - L1MC4a LINE L1 -1911 5897 5856 674 296 100 12 chr20 35963437 35963677 -36190205 - MIR SINE MIR 0 262 2 288 258 124 0 chr20 35963753 35963842 -36190040 - L2 LINE L2 -25 3288 3189 198 103 0 0 chr20 35964289 35964318 -36189564 + (CAGCT)n Simple_repeat Simple_repeat 3 31 0 327 306 0 28 chr20 35964716 35964824 -36189058 + MIR3 SINE MIR 76 180 -28 350 295 109 43 chr20 35964835 35965045 -36188837 - L3b LINE CR1 -195 1388 1165 327 318 23 64 chr20 35965172 35965345 -36188537 + L2 LINE L2 2584 2749 -565 21 0 0 0 chr20 35965346 35965367 -36188515 + AT_rich Low_complexity Low_complexity 1 21 0 756 311 154 7 chr20 35965559 35966151 -36187731 + L2 LINE L2 2546 3225 -88 1624 174 0 27 chr20 35966188 35966487 -36187395 - AluJo SINE Alu -19 293 3 22 0 0 0 chr20 35966487 35966509 -36187373 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr20 35966588 35966609 -36187273 + AT_rich Low_complexity Low_complexity 1 21 0 628 144 10 0 chr20 35966727 35966824 -36187058 - AluJ/FLAM SINE Alu -214 98 1 206 226 0 129 chr20 35967028 35967090 -36186792 - L3b LINE CR1 0 1583 1530 391 336 84 46 chr20 35967107 35967306 -36186576 - L3 LINE CR1 -108 1469 1258 1806 132 0 40 chr20 35967306 35967478 -36186404 - AluSx SINE Alu -8 304 147 2388 76 0 7 chr20 35967478 35967779 -36186103 - AluSx SINE Alu -13 299 1 1806 132 0 40 chr20 35967779 35967902 -36185980 - AluSx SINE Alu -165 147 21 391 336 84 46 chr20 35967902 35967940 -36185942 - L3 LINE CR1 -319 1258 1223 353 269 142 22 chr20 35968353 35968487 -36185395 - L2 LINE L2 -1 3312 3163 396 216 72 0 chr20 35968517 35968628 -36185254 + L1ME3A LINE L1 5856 5974 -196 24 0 0 0 chr20 35968654 35968678 -36185204 + AT_rich Low_complexity Low_complexity 1 24 0 1531 183 63 0 chr20 35968761 35968926 -36184956 - AluSx SINE Alu -9 303 111 198 0 0 0 chr20 35968926 35968948 -36184934 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1531 183 63 0 chr20 35968948 35969067 -36184815 - AluSx SINE Alu -201 111 1 390 200 0 0 chr20 35969104 35969179 -36184703 + L1ME2 LINE L1 5687 5761 -2047 2311 58 0 3 chr20 35969277 35969568 -36184314 - AluY SINE Alu -21 290 1 640 259 49 5 chr20 35969593 35969798 -36184084 - L1ME2 LINE L1 -16 6148 5935 330 292 70 11 chr20 35970384 35970569 -36183313 + L1ME2 LINE L1 5894 6089 -75 208 202 50 17 chr20 35970595 35970714 -36183168 + CT-rich Low_complexity Low_complexity 5 127 0 284 263 53 11 chr20 35970724 35970819 -36183063 + MIR3 SINE MIR 66 164 -44 228 261 58 58 chr20 35971852 35971921 -36181961 + MIR SINE MIR 117 185 -77 613 245 7 0 chr20 35972217 35972356 -36181526 + MER45A DNA AcHobo 38 177 -1 218 246 49 16 chr20 35972388 35972449 -36181433 - MIR SINE MIR -190 72 10 195 240 40 0 chr20 35972481 35972531 -36181351 + MIR3 SINE MIR 10 61 -147 307 242 117 17 chr20 35972596 35972716 -36181166 - MIR3 SINE MIR -27 181 50 213 264 11 73 chr20 35973379 35973557 -36180325 + (CGGGG)n Simple_repeat Simple_repeat 2 168 0 1952 100 43 4 chr20 35973827 35974107 -36179775 + AluSx SINE Alu 9 299 -13 2350 93 0 3 chr20 35975121 35975431 -36178451 + AluSx SINE Alu 1 309 -3 918 136 0 0 chr20 35975458 35975590 -36178292 + FLAM_C SINE Alu 1 132 -11 316 322 34 0 chr20 35975688 35975806 -36178076 + MIR SINE MIR 113 234 -28 217 310 0 0 chr20 35976139 35976197 -36177685 + T-rich Low_complexity Low_complexity 2 59 0 362 283 96 18 chr20 35976764 35976921 -36176961 - L1M4 LINE L1 -2849 3297 3115 180 0 0 0 chr20 35976921 35976941 -36176941 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 362 283 96 18 chr20 35976941 35976980 -36176902 - L1M4 LINE L1 -3031 3115 3080 195 129 0 0 chr20 35977467 35977498 -36176384 + (GGGAA)n Simple_repeat Simple_repeat 5 35 0 340 299 27 36 chr20 35977594 35977748 -36176134 + MIR SINE MIR 51 206 -56 283 289 18 44 chr20 35977799 35977913 -36175969 - L2 LINE L2 -159 3113 3003 421 280 12 0 chr20 35979311 35979479 -36174403 + (CA)n Simple_repeat Simple_repeat 2 171 0 323 350 55 51 chr20 35982199 35982359 -36171523 - L1ME4a LINE L1 0 6121 5958 2279 109 0 0 chr20 35982359 35982662 -36171220 - AluSx SINE Alu -9 303 1 323 350 55 51 chr20 35982662 35982738 -36171144 - L1ME4a LINE L1 -163 5958 5884 253 323 100 72 chr20 35982855 35982980 -36170902 - MIR SINE MIR -58 150 27 655 329 63 40 chr20 35984773 35985220 -36168662 - L2 LINE L2 -663 2651 2195 326 324 34 51 chr20 35985372 35985548 -36168334 - L1MC4a LINE L1 -1896 5912 5740 2533 36 0 3 chr20 35985656 35985959 -36167923 + AluY SINE Alu 1 302 -9 21 0 0 0 chr20 35986024 35986045 -36167837 + AT_rich Low_complexity Low_complexity 1 21 0 2088 107 0 29 chr20 35986114 35986422 -36167460 - AluSx SINE Alu -13 299 1 269 354 39 0 chr20 35988348 35988475 -36165407 - L2 LINE L2 -1 3312 3181 449 324 48 25 chr20 35989162 35989401 -36164481 + MIR SINE MIR 13 258 -4 355 322 117 0 chr20 35989646 35989817 -36164065 - MIR SINE MIR -4 258 68 223 273 77 72 chr20 35993566 35993705 -36160177 - MIR SINE MIR -85 123 9 204 331 27 38 chr20 35999429 35999589 -36154293 - MIR SINE MIR -27 181 18 270 250 44 0 chr20 35999797 35999865 -36154017 + L2 LINE L2 3193 3263 -9 292 264 69 0 chr20 36001284 36001356 -36152526 - L2 LINE L2 -1 3312 3236 220 378 22 0 chr20 36002686 36002776 -36151106 + MIR3 SINE MIR 87 178 -30 1707 140 53 13 chr20 36002925 36003225 -36150657 + AluJo SINE Alu 1 312 0 479 276 90 0 chr20 36003472 36003617 -36150265 + MIR SINE MIR 86 243 -19 245 326 34 0 chr20 36004358 36004447 -36149435 + L2 LINE L2 2677 2768 -546 1532 156 82 92 chr20 36004448 36004531 -36149351 - MER47B DNA MER2_type -1905 418 336 2281 110 10 3 chr20 36004531 36004832 -36149050 + AluSg SINE Alu 1 303 -7 1532 156 82 92 chr20 36004832 36005151 -36148731 - MER47B DNA MER2_type -1987 336 20 644 205 145 56 chr20 36005767 36006175 -36147707 + Charlie8 DNA MER1_type 20 470 -1947 1958 109 25 14 chr20 36006851 36007135 -36146747 + AluSx SINE Alu 1 287 -25 536 111 0 0 chr20 36007629 36007701 -36146181 - AluS SINE Alu -238 74 3 901 80 0 0 chr20 36007867 36007979 -36145903 - AluSg/x SINE Alu -9 301 190 190 254 102 0 chr20 36008397 36008456 -36145426 - MIR SINE MIR -111 151 87 2038 116 3 10 chr20 36008557 36008850 -36145032 - AluSx SINE Alu -19 293 3 1967 104 6 83 chr20 36009014 36009341 -36144541 - AluSq SINE Alu -11 302 1 257 281 52 21 chr20 36009969 36010065 -36143817 + MIR SINE MIR 9 107 -155 741 290 162 16 chr20 36010409 36010840 -36143042 + L1MC4a LINE L1 5444 5937 -1871 318 85 21 0 chr20 36011326 36011373 -36142509 - MADE1 DNA Mariner 0 80 33 2275 108 6 13 chr20 36011865 36012179 -36141703 + AluSx SINE Alu 1 312 0 1488 241 178 25 chr20 36013337 36014029 -36139853 + L2 LINE L2 2177 2974 -340 198 220 40 0 chr20 36015561 36015611 -36138271 + MIR SINE MIR 73 124 -84 2146 108 0 0 chr20 36015729 36016007 -36137875 - AluSx SINE Alu -33 279 2 201 320 124 0 chr20 36016053 36016150 -36137732 + MIR3 SINE MIR 81 189 -19 1802 162 10 23 chr20 36016291 36016600 -36137282 + AluJb SINE Alu 1 305 -7 645 242 99 31 chr20 36016702 36016925 -36136957 + MIR SINE MIR 1 238 -24 3653 183 28 21 chr20 36017691 36018094 -36135788 - L1MB8 LINE L1 0 6247 5835 1942 147 16 22 chr20 36018094 36018408 -36135474 + AluJb SINE Alu 1 312 0 3653 183 28 21 chr20 36018408 36018765 -36135117 - L1MB8 LINE L1 -412 5835 5482 1189 178 83 46 chr20 36018784 36019025 -36134857 - AluJo SINE Alu -62 250 1 8285 225 65 59 chr20 36019025 36019775 -36134107 - L1MB8 LINE L1 -743 5472 4728 1970 150 7 3 chr20 36019775 36020068 -36133814 - AluJo SINE Alu -18 294 1 8285 225 65 59 chr20 36020068 36021759 -36132123 - L1MB8 LINE L1 -1487 4728 3049 659 120 54 174 chr20 36021759 36021943 -36131939 - AluSc SINE Alu -13 296 135 8285 225 65 59 chr20 36021943 36022521 -36131361 - L1MB8 LINE L1 -3166 3049 2476 1850 118 25 18 chr20 36022521 36022801 -36131081 + AluSx SINE Alu 1 282 -30 8285 225 65 59 chr20 36022801 36023177 -36130705 - L1MB8 LINE L1 -3739 2476 2104 2672 48 0 3 chr20 36023177 36023488 -36130394 - AluY SINE Alu -1 310 1 8285 225 65 59 chr20 36023488 36023517 -36130365 - L1MB8 LINE L1 -4111 2104 2077 2242 110 3 0 chr20 36023517 36023816 -36130066 + AluSp SINE Alu 6 305 -8 8285 225 65 59 chr20 36023816 36023871 -36130011 - L1MB8 LINE L1 -4138 2077 2024 695 119 30 0 chr20 36023871 36023972 -36129910 - U6 snRNA snRNA -2 105 2 8285 225 65 59 chr20 36023972 36024230 -36129652 - L1MB8 LINE L1 -4191 2024 1740 2054 251 58 46 chr20 36024264 36024787 -36129095 - L1M4c LINE L1 -4452 2686 2171 1407 196 43 43 chr20 36024787 36025088 -36128794 - AluJb SINE Alu -11 301 1 2054 251 58 46 chr20 36025088 36025441 -36128441 - L1M4c LINE L1 -4967 2171 1639 1747 169 7 0 chr20 36025454 36025738 -36128144 - AluSx SINE Alu -22 290 5 941 161 0 0 chr20 36025740 36025877 -36128005 - AluSq/x SINE Alu -175 137 1 3687 164 63 33 chr20 36025883 36026020 -36127862 - L1M4c LINE L1 -5201 1658 1527 2512 62 0 3 chr20 36026020 36026324 -36127558 - AluY SINE Alu -8 303 1 3687 164 63 33 chr20 36026324 36026473 -36127409 - L1M4c LINE L1 -5332 1527 1384 1798 134 47 4 chr20 36026473 36026749 -36127133 + AluSx SINE Alu 1 288 -24 3687 164 63 33 chr20 36026749 36027240 -36126642 - L1M4c LINE L1 -5475 1384 857 800 161 8 0 chr20 36027262 36027386 -36126496 + AluSq/x SINE Alu 1 125 -188 2986 6 0 0 chr20 36027416 36027731 -36126151 + AluYb8 SINE Alu 1 315 -3 1386 243 58 46 chr20 36027753 36028143 -36125739 - L1M4c LINE L1 -6022 837 306 611 313 27 5 chr20 36029108 36029332 -36124550 + L1ME LINE L1 5596 5824 -297 22 80 0 0 chr20 36029384 36029434 -36124448 + AT_rich Low_complexity Low_complexity 1 50 0 547 192 119 23 chr20 36030002 36030179 -36123703 + L1MC5 LINE L1 7605 7798 -163 1993 139 11 0 chr20 36030217 36030498 -36123384 + AluSx SINE Alu 1 284 -28 210 37 0 0 chr20 36030506 36030533 -36123349 + (CA)n Simple_repeat Simple_repeat 1 27 0 3493 135 21 12 chr20 36030601 36030617 -36123265 + L1MB5 LINE L1 5585 5599 -575 2580 56 0 3 chr20 36030617 36030922 -36122960 + AluY SINE Alu 1 304 -7 3493 135 21 12 chr20 36030922 36031240 -36122642 + L1MB5 LINE L1 5599 5929 -245 1546 164 129 7 chr20 36031240 36031550 -36122332 + MER7A DNA MER2_type 1 346 0 3493 135 21 12 chr20 36031550 36031791 -36122091 + L1MB5 LINE L1 5929 6166 -8 229 225 0 84 chr20 36031821 36031892 -36121990 + L1MC4a LINE L1 5435 5499 -2309 315 326 74 22 chr20 36031966 36032101 -36121781 + L1MC4a LINE L1 5742 5883 -1925 1942 151 6 6 chr20 36032343 36032655 -36121227 + AluSx SINE Alu 1 312 0 200 325 12 0 chr20 36033215 36033295 -36120587 - L3 LINE CR1 -858 719 639 25 0 0 0 chr20 36033386 36033411 -36120471 + AT_rich Low_complexity Low_complexity 1 25 0 268 200 143 14 chr20 36033644 36033714 -36120168 + MLT1B LTR MaLR 22 100 -290 2017 194 72 19 chr20 36033723 36034151 -36119731 + MLT2B3 LTR ERVL 1 451 -103 1199 124 23 0 chr20 36034151 36034328 -36119554 - AluSq SINE Alu -6 307 127 598 181 17 9 chr20 36034329 36034445 -36119437 + MLT2B3 LTR ERVL 438 554 0 1331 173 13 77 chr20 36034447 36034759 -36119123 + MLT1B LTR MaLR 99 390 0 364 291 35 14 chr20 36035353 36035494 -36118388 + MIR SINE MIR 106 249 -13 667 48 0 0 chr20 36035567 36035651 -36118231 - L1PA5 LINE L1 -3 6151 6068 1081 263 134 19 chr20 36036378 36036800 -36117082 - L1MC4a LINE L1 -1639 6169 5797 2284 110 0 3 chr20 36036800 36037100 -36116782 - AluSx SINE Alu -13 299 1 1081 263 134 19 chr20 36037100 36037118 -36116764 - L1MC4a LINE L1 -2011 5797 5782 1693 132 107 13 chr20 36037118 36037428 -36116454 - MER44D DNA MER2_type 0 609 1 1081 263 134 19 chr20 36037428 36037510 -36116372 - L1MC4a LINE L1 -2026 5782 5586 249 260 0 39 chr20 36037515 36037592 -36116290 - Charlie4 DNA MER1_type -5 1956 1883 2026 154 0 6 chr20 36037662 36037973 -36115909 + AluJb SINE Alu 2 310 -2 455 314 59 0 chr20 36038351 36038504 -36115378 + MIR SINE MIR 28 189 -73 1645 169 25 14 chr20 36038941 36039090 -36114792 - AluJo SINE Alu -30 282 127 2282 93 7 17 chr20 36039090 36039392 -36114490 - AluSx SINE Alu -13 299 1 1645 169 25 14 chr20 36039392 36039521 -36114361 - AluJo SINE Alu -185 127 1 290 250 41 15 chr20 36039523 36039634 -36114248 - L1ME LINE L1 -401 5763 5654 1966 138 21 7 chr20 36040428 36040717 -36113165 - AluSx SINE Alu -19 293 1 500 272 110 18 chr20 36040871 36041143 -36112739 - L1ME3 LINE L1 -196 5966 5670 526 197 40 85 chr20 36041598 36041765 -36112117 - L1MC4a LINE L1 -743 5441 5287 2187 114 0 23 chr20 36041765 36042071 -36111811 - AluSx SINE Alu -13 299 1 526 197 40 85 chr20 36042071 36042177 -36111705 - L1MC4a LINE L1 -897 5287 5178 370 204 184 19 chr20 36043863 36043966 -36109916 + MIR SINE MIR 25 144 -64 1917 161 7 0 chr20 36043985 36044289 -36109593 + AluJb SINE Alu 1 306 -6 844 184 6 25 chr20 36044403 36044566 -36109316 + FRAM SINE Alu 1 160 -6 333 0 0 0 chr20 36044586 36044623 -36109259 + (CA)n Simple_repeat Simple_repeat 2 38 0 980 166 11 11 chr20 36044849 36045024 -36108858 - FAM SINE Alu 0 175 1 21 0 0 0 chr20 36045165 36045186 -36108696 + AT_rich Low_complexity Low_complexity 1 21 0 1796 173 20 10 chr20 36045640 36045946 -36107936 - AluJb SINE Alu -3 309 1 2095 123 20 0 chr20 36046043 36046344 -36107538 - AluSx SINE Alu -5 307 1 287 194 0 145 chr20 36046377 36046501 -36107381 + MER102a DNA MER1_type 222 327 -3 30 0 0 0 chr20 36046580 36046610 -36107272 + AT_rich Low_complexity Low_complexity 1 30 0 990 194 40 25 chr20 36046611 36046889 -36106993 - L1MA4 LINE L1 -7 6293 6012 1221 179 15 110 chr20 36047128 36047463 -36106419 + MER33 DNA MER1_type 21 323 -1 233 277 54 36 chr20 36047892 36048004 -36105878 - MIR SINE MIR -42 220 107 271 304 228 22 chr20 36048254 36048438 -36105444 - L3 LINE CR1 -93 1484 1263 795 211 78 0 chr20 36049060 36049226 -36104656 - FRAM SINE Alu 0 176 1 300 238 177 41 chr20 36049829 36049976 -36103906 - L2 LINE L2 0 3313 3147 22 35 0 0 chr20 36050116 36050145 -36103737 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 36050226 36050247 -36103635 + AT_rich Low_complexity Low_complexity 1 21 0 2261 93 3 20 chr20 36050251 36050551 -36103331 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr20 36050727 36050755 -36103127 + AT_rich Low_complexity Low_complexity 1 28 0 350 246 208 8 chr20 36051284 36051414 -36102468 + MIR3 SINE MIR 38 193 -15 3229 217 73 14 chr20 36051640 36052237 -36101645 + L1MB8 LINE L1 2405 3084 -3062 2325 99 3 0 chr20 36052237 36052541 -36101341 - AluSx SINE Alu -7 305 1 3229 217 73 14 chr20 36052541 36052930 -36100952 + L1MB8 LINE L1 3084 3449 -2697 1675 175 19 23 chr20 36052930 36053415 -36100467 + AluJo SINE Alu 1 484 0 734 142 0 11 chr20 36053239 36053503 -36100379 + (GAA)n Simple_repeat Simple_repeat 1 262 0 5909 167 92 43 chr20 36053582 36053863 -36100019 + L1MB8 LINE L1 3496 3762 -2416 1980 137 20 13 chr20 36053863 36054163 -36099719 + AluJo SINE Alu 7 308 -4 5909 167 92 43 chr20 36054163 36056432 -36097450 + L1MB8 LINE L1 3762 6173 -5 391 200 0 24 chr20 36056443 36056528 -36097354 + L1MB7 LINE L1 5861 5943 -231 1991 130 46 35 chr20 36056528 36056897 -36096985 + THE1C LTR MaLR 1 373 -2 765 186 231 0 chr20 36056927 36057126 -36096756 + L1MB7 LINE L1 5933 6177 -7 1440 174 18 18 chr20 36057134 36057416 -36096466 + AluJo SINE Alu 6 287 -25 234 196 48 95 chr20 36059618 36059664 -36094218 - L1ME3A LINE L1 -5 6165 6118 1627 173 7 14 chr20 36059664 36059959 -36093923 - AluJb SINE Alu -19 293 1 234 196 48 95 chr20 36059959 36060080 -36093802 - L1ME3A LINE L1 -52 6118 6006 451 276 177 30 chr20 36060116 36060511 -36093371 + L1ME4a LINE L1 4951 5403 -743 919 175 48 10 chr20 36060544 36060750 -36093132 + L1MB8 LINE L1 5263 5476 -702 723 171 0 0 chr20 36060760 36060871 -36093011 + FLAM_C SINE Alu 6 116 -27 3509 173 40 25 chr20 36060901 36061595 -36092287 + L1MB8 LINE L1 5474 6178 0 404 196 165 30 chr20 36061661 36061794 -36092088 + L1ME3A LINE L1 6020 6170 0 * 410 260 154 29 chr20 36061769 36062093 -36091789 + L1ME4a LINE L1 5452 5819 -302 2008 111 36 0 chr20 36062093 36062372 -36091510 - AluSg SINE Alu -21 289 1 410 260 154 29 chr20 36062372 36062384 -36091498 + L1ME4a LINE L1 5819 5828 -293 297 0 0 0 chr20 36062499 36062532 -36091350 + (CA)n Simple_repeat Simple_repeat 2 34 0 640 247 125 103 chr20 36063072 36063224 -36090658 + MLT1G1 LTR MaLR 18 165 -390 1846 154 0 3 chr20 36063224 36063509 -36090373 + AluSx SINE Alu 14 297 -15 640 247 125 103 chr20 36063509 36063821 -36090061 + MLT1G1 LTR MaLR 165 542 -13 223 304 51 0 chr20 36063823 36063902 -36089980 + L2 LINE L2 3009 3091 -181 2321 52 42 0 chr20 36063964 36064250 -36089632 - AluY SINE Alu -13 298 1 41626 66 10 3 chr20 36064836 36070942 -36082940 - L1PA5 LINE L1 -2 6152 11 579 183 10 0 chr20 36071032 36071136 -36082746 + MER5A DNA MER1_type 84 188 -1 388 161 46 23 chr20 36071393 36071480 -36082402 + L1ME4a LINE L1 5998 6086 -35 1280 216 93 30 chr20 36071912 36072336 -36081546 + L1MCa LINE L1 2096 2585 -3841 2257 112 0 0 chr20 36072336 36072631 -36081251 + AluSx SINE Alu 1 295 -17 1280 216 93 30 chr20 36072631 36072893 -36080989 + L1MCa LINE L1 2585 2829 -3597 * 1422 226 50 2 chr20 36072881 36073297 -36080585 + L1MCa LINE L1 3202 3637 -2789 1522 164 30 19 chr20 36073316 36073585 -36080297 + AluJo SINE Alu 30 301 -11 1360 160 59 65 chr20 36073589 36073762 -36080120 + L1MB7 LINE L1 5714 5887 -297 1837 154 0 35 chr20 36073762 36074073 -36079809 + AluJb SINE Alu 3 302 -10 1360 160 59 65 chr20 36074073 36074356 -36079526 + L1MB7 LINE L1 5887 6127 -57 417 121 45 0 chr20 36074398 36074464 -36079418 + L1MB7 LINE L1 6116 6184 0 731 196 22 0 chr20 36074491 36074629 -36079253 + L1MB7 LINE L1 6034 6174 -10 1385 252 140 27 chr20 36074637 36074783 -36079099 + L1MEc LINE L1 2149 2277 -3938 1375 208 18 18 chr20 36074783 36075118 -36078764 + AluJb SINE Alu 1 335 0 1385 252 140 27 chr20 36075118 36075257 -36078625 + L1MEc LINE L1 2277 2399 -3816 2117 130 7 0 chr20 36075257 36075558 -36078324 + AluSx SINE Alu 1 303 -9 1385 252 140 27 chr20 36075558 36076126 -36077756 + L1MEc LINE L1 2399 3064 -3151 1256 220 134 61 chr20 36076128 36076867 -36077015 + L1MEc LINE L1 3711 4541 -1674 2146 108 0 33 chr20 36076870 36077176 -36076706 + AluSx SINE Alu 1 296 -16 927 234 110 72 chr20 36077181 36077527 -36076355 + HAL1 LINE L1 1564 1922 -585 1788 72 126 15 chr20 36077570 36077833 -36076049 + AluSg SINE Alu 1 292 -18 302 206 27 0 chr20 36077873 36077946 -36075936 + L1PB4 LINE L1 6080 6154 -2 316 319 0 0 chr20 36078016 36078107 -36075775 - L1MC4 LINE L1 -1339 6703 6613 315 213 0 0 chr20 36078107 36078182 -36075700 + (TA)n Simple_repeat Simple_repeat 2 76 0 300 253 0 13 chr20 36078182 36078257 -36075625 + L1MCa LINE L1 1995 2068 -4358 377 170 0 32 chr20 36078257 36078351 -36075531 + (TA)n Simple_repeat Simple_repeat 2 92 0 554 237 155 16 chr20 36078394 36078639 -36075243 + HAL1 LINE L1 2062 2340 -167 1641 183 14 3 chr20 36078884 36079179 -36074703 + AluJo SINE Alu 1 298 -14 312 140 88 0 chr20 36079530 36079587 -36074295 - AluSx SINE Alu -61 239 178 1185 145 0 11 chr20 36079632 36079811 -36074071 - AluSx SINE Alu -135 177 1 1032 90 0 0 chr20 36079984 36080129 -36073753 + (TG)n Simple_repeat Simple_repeat 2 146 0 2131 123 3 0 chr20 36080305 36080597 -36073285 + AluSg SINE Alu 1 293 -17 2460 56 0 33 chr20 36080600 36080906 -36072976 + AluY SINE Alu 1 296 -15 231 216 27 14 chr20 36080906 36080980 -36072902 - MER113 DNA MER1_type? -412 109 35 351 276 32 32 chr20 36081148 36081271 -36072611 - L2 LINE L2 -500 2814 2692 609 259 67 26 chr20 36081453 36081646 -36072236 - L2 LINE L2 -898 2416 2216 902 253 20 5 chr20 36081712 36081910 -36071972 - MIR SINE MIR -30 232 32 201 319 154 0 chr20 36081986 36082077 -36071805 - L2 LINE L2 -19 3253 3149 578 263 34 23 chr20 36082094 36082269 -36071613 - MIR SINE MIR -9 253 77 1738 133 50 46 chr20 36082315 36082593 -36071289 + L1MB2 LINE L1 5821 6102 -69 907 164 0 0 chr20 36082593 36082721 -36071161 - FLAM_C SINE Alu -5 128 1 1738 133 50 46 chr20 36082721 36082765 -36071117 + L1MB2 LINE L1 6102 6144 -27 191 119 24 0 chr20 36082765 36082794 -36071088 + (TA)n Simple_repeat Simple_repeat 1 33 -10 1468 200 14 31 chr20 36082794 36083084 -36070798 - AluJb SINE Alu -27 285 1 191 119 24 0 chr20 36083084 36083096 -36070786 + (TA)n Simple_repeat Simple_repeat 33 43 0 2172 108 10 0 chr20 36083121 36083417 -36070465 + AluSg SINE Alu 1 299 -11 1212 128 96 0 chr20 36083479 36083666 -36070216 + AluJo SINE Alu 90 294 -18 22 0 0 0 chr20 36083725 36083747 -36070135 + AT_rich Low_complexity Low_complexity 1 22 0 2335 95 10 0 chr20 36083930 36084226 -36069656 - AluSx SINE Alu -13 299 1 261 247 133 47 chr20 36084375 36084525 -36069357 + MIR SINE MIR 93 255 -7 260 29 0 0 chr20 36084603 36084638 -36069244 - AluJb SINE Alu -5 297 263 902 169 115 16 chr20 36084638 36084821 -36069061 - AluJb SINE Alu -90 222 22 790 204 135 9 chr20 36085309 36085539 -36068343 - MIR SINE MIR 0 262 4 184 310 17 0 chr20 36085542 36085600 -36068282 - L2 LINE L2 -78 3194 3136 225 240 0 27 chr20 36086102 36086177 -36067705 + (CCCCG)n Simple_repeat Simple_repeat 1 73 0 487 232 56 8 chr20 36087286 36087411 -36066471 + MER94 DNA DNA 1 131 -3 1677 175 18 0 chr20 36087451 36087783 -36066099 + L1 LINE L1 4616 4953 -1193 241 221 53 84 chr20 36087784 36087852 -36066030 + AluSg/x SINE Alu 101 167 -133 2211 108 3 0 chr20 36087852 36088139 -36065743 + AluSg SINE Alu 10 297 -13 3220 178 44 33 chr20 36088139 36088576 -36065306 + LTR39 LTR ERV1 169 616 -167 2408 87 0 0 chr20 36088576 36088875 -36065007 + AluSx SINE Alu 1 299 -13 3220 178 44 33 chr20 36088875 36089045 -36064837 + LTR39 LTR ERV1 616 783 0 2390 74 0 0 chr20 36089626 36089923 -36063959 + AluSg SINE Alu 1 297 -13 1017 154 31 6 chr20 36090154 36090316 -36063566 - FRAM SINE Alu 0 166 1 502 234 0 27 chr20 36090473 36090584 -36063298 - L2 LINE L2 -15 3298 3191 195 241 19 0 chr20 36090585 36090639 -36063243 - MIR SINE MIR -2 260 206 225 146 0 0 chr20 36090790 36090831 -36063051 + LTR66 LTR ERVL 399 439 -171 308 244 47 0 chr20 36090837 36090923 -36062959 - L1MC4 LINE L1 -1339 6703 6614 240 251 76 0 chr20 36090927 36091036 -36062846 - L1MC4 LINE L1 -1139 6646 6578 225 231 62 0 chr20 36091049 36091114 -36062768 - L1MC3 LINE L1 -1139 6646 6578 555 270 0 0 chr20 36091124 36091298 -36062584 + (TA)n Simple_repeat Simple_repeat 1 174 0 271 189 28 30 chr20 36091298 36091404 -36062478 - L1MCa LINE L1 -1339 6983 2006 240 300 0 0 chr20 36091327 36091417 -36062465 + L1MC4 LINE L1 6614 6703 -1339 * 200 222 0 0 chr20 36091418 36091463 -36062419 + (TA)n Simple_repeat Simple_repeat 1 45 0 1095 155 0 0 chr20 36091518 36091673 -36062209 - FRAM SINE Alu -8 158 4 1678 266 77 22 chr20 36091687 36091828 -36062054 - L1MC4 LINE L1 -142 7900 7768 2216 117 3 10 chr20 36091828 36092135 -36061747 - AluSp SINE Alu -6 307 3 2205 125 0 0 chr20 36092137 36092433 -36061449 - AluSx SINE Alu -16 296 1 1678 266 77 22 chr20 36092433 36092928 -36060954 - L1MC4 LINE L1 -274 7768 7226 1707 109 40 66 chr20 36092932 36093234 -36060648 - AluSx SINE Alu -18 294 1 1146 68 0 0 chr20 36093269 36093401 -36060481 - AluY SINE Alu -179 132 1 567 243 119 18 chr20 36093402 36093620 -36060262 - L1MC4 LINE L1 -804 7238 6999 1551 179 23 83 chr20 36093631 36094016 -36059866 - L1ME2 LINE L1 -9 6155 5794 1186 186 0 1 chr20 36094037 36094301 -36059581 + AluJo SINE Alu 2 300 -12 1667 101 53 98 chr20 36094305 36094446 -36059436 + MER39B LTR ERV1 20 166 -487 2363 101 3 0 chr20 36094446 36094754 -36059128 + AluSx SINE Alu 1 309 -3 1667 101 53 98 chr20 36094754 36094950 -36058932 + MER39B LTR ERV1 166 342 -311 380 227 0 0 chr20 36095007 36095082 -36058800 - L1MC4 LINE L1 -1033 7009 6935 180 301 0 0 chr20 36095320 36095423 -36058459 + (CA)n Simple_repeat Simple_repeat 2 104 0 220 318 15 15 chr20 36095464 36095530 -36058352 - L2 LINE L2 -21 3251 3186 1602 161 21 24 chr20 36095565 36095856 -36058026 + AluJb SINE Alu 9 298 -14 542 286 52 7 chr20 36096009 36096163 -36057719 - L2 LINE L2 -3 3269 3109 743 190 0 0 chr20 36096198 36096314 -36057568 - FLAM_C SINE Alu -22 121 6 1716 101 13 21 chr20 36096481 36096719 -36057163 - AluSc SINE Alu -18 291 56 726 295 42 25 chr20 36096802 36097158 -36056724 + L1M4 LINE L1 3255 3616 -2530 2710 111 16 5 chr20 36097252 36097623 -36056259 + THE1C LTR MaLR 1 375 0 569 187 145 36 chr20 36097688 36097854 -36056028 - MER5A DNA MER1_type -5 184 1 1937 114 23 0 chr20 36098934 36099197 -36054685 - AluSq SINE Alu -30 283 15 811 161 0 8 chr20 36099199 36099317 -36054565 + FLAM_C SINE Alu 2 118 -25 210 37 0 0 chr20 36099320 36099347 -36054535 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 225 0 0 0 chr20 36099632 36099657 -36054225 + (A)n Simple_repeat Simple_repeat 1 25 0 2212 85 11 0 chr20 36099717 36100027 -36053855 + AluSq SINE Alu 1 313 0 458 139 96 35 chr20 36100236 36100351 -36053531 + MER112 DNA MER1_type 132 253 -7 2989 163 43 13 chr20 36100586 36101140 -36052742 - L1MB7 LINE L1 -19 6165 5595 1364 92 0 6 chr20 36101155 36101329 -36052553 - AluSg/x SINE Alu -55 257 85 407 233 12 0 chr20 36101332 36101418 -36052464 - L1MB7 LINE L1 -574 5606 5520 2084 108 7 0 chr20 36101419 36101728 -36052154 + AluJb SINE Alu 1 311 0 1134 175 21 0 chr20 36101773 36101962 -36051920 - AluJo SINE Alu -119 193 1 33 25 0 0 chr20 36101962 36102002 -36051880 + AT_rich Low_complexity Low_complexity 1 40 0 2311 86 13 0 chr20 36102007 36102308 -36051574 + AluSc SINE Alu 1 305 -4 528 135 29 10 chr20 36102312 36102416 -36051466 - L1MA8 LINE L1 -11 6280 6175 522 185 17 25 chr20 36102453 36102572 -36051310 - LTR33 LTR ERVL -2 519 402 1569 187 72 82 chr20 36102635 36102687 -36051195 - MLT2D LTR ERVL 0 414 363 2277 100 7 3 chr20 36102687 36102988 -36050894 + AluSq SINE Alu 5 306 -7 1569 187 72 82 chr20 36102988 36103352 -36050530 - MLT2D LTR ERVL -51 363 2 2854 57 0 0 chr20 36103402 36103735 -36050147 - L1PA6 LINE L1 -1 6153 5821 885 142 0 0 chr20 36103763 36103883 -36049999 - FLAM_C SINE Alu -23 120 1 678 280 18 84 chr20 36103894 36104169 -36049713 - LTR33 LTR ERVL -264 257 1 258 253 115 22 chr20 36104204 36104386 -36049496 + L1M4 LINE L1 3102 3300 -2846 1808 164 13 26 chr20 36104388 36104692 -36049190 + AluJb SINE Alu 1 300 -12 1645 216 22 79 chr20 36105220 36105654 -36048228 + L1MC5 LINE L1 6735 7129 -832 2489 94 3 0 chr20 36105654 36105963 -36047919 + AluSp SINE Alu 1 310 -3 1645 216 22 79 chr20 36105963 36106108 -36047774 + L1MC5 LINE L1 7129 7281 -680 1176 156 85 0 chr20 36106125 36106336 -36047546 + AluJo SINE Alu 84 312 0 663 199 186 96 chr20 36106338 36106901 -36046981 + L1MC5 LINE L1 7298 7911 -50 945 198 11 0 chr20 36106903 36107080 -36046802 + AluJb SINE Alu 134 312 0 375 207 159 29 chr20 36107084 36107195 -36046687 + L1M4 LINE L1 3072 3227 -2919 1785 131 16 84 chr20 36107206 36107527 -36046355 + AluJb SINE Alu 1 299 -13 883 130 0 55 chr20 36107533 36107679 -36046203 + FLAM_C SINE Alu 1 138 -5 579 291 89 48 chr20 36107729 36107977 -36045905 + L2 LINE L2 3021 3282 -31 1707 173 3 14 chr20 36107977 36108261 -36045621 + AluJb SINE Alu 13 293 -19 579 291 89 48 chr20 36108261 36108283 -36045599 + L2 LINE L2 3282 3302 -11 2155 94 0 85 chr20 36108334 36108664 -36045218 + AluSx SINE Alu 5 306 -6 25 0 0 0 chr20 36108953 36108978 -36044904 + AT_rich Low_complexity Low_complexity 1 25 0 212 333 0 14 chr20 36109563 36109635 -36044247 + MIR SINE MIR 62 132 -76 * 400 215 32 0 chr20 36109623 36109716 -36044166 + L2 LINE L2 2576 2671 -643 696 136 0 27 chr20 36109738 36109848 -36044034 - FLAM_C SINE Alu -25 118 12 691 272 167 4 chr20 36109871 36110227 -36043655 + L2 LINE L2 2701 3104 -209 247 297 11 0 chr20 36110249 36110340 -36043542 - L1P4 LINE L1 -349 5825 5734 2304 101 0 10 chr20 36110346 36110643 -36043239 - AluSg SINE Alu -16 294 1 1126 225 11 22 chr20 36111350 36111635 -36042247 + L2 LINE L2 2643 2922 -350 457 241 143 18 chr20 36111620 36111732 -36042150 + L2 LINE L2 3175 3300 -13 * 587 279 38 0 chr20 36111903 36112061 -36041821 + MIR3 SINE MIR 27 190 -18 321 300 22 0 chr20 36112532 36112622 -36041260 + MLT1J LTR MaLR 2 93 -418 355 190 63 0 chr20 36112694 36112773 -36041109 + MLT1J LTR MaLR 420 503 -8 2078 118 10 23 chr20 36112875 36113180 -36040702 + AluJo SINE Alu 11 311 -1 240 354 72 3 chr20 36113228 36113423 -36040459 + L3 LINE CR1 1008 1279 -298 2027 139 3 0 chr20 36113628 36113915 -36039967 - AluSx SINE Alu -24 288 1 2398 110 3 0 chr20 36114140 36114449 -36039433 - AluSx SINE Alu -2 310 1 3717 136 0 6 chr20 36114581 36115111 -36038771 - MER1A DNA MER1_type 0 527 1 1755 149 45 24 chr20 36115352 36115641 -36038241 - AluJo SINE Alu -17 295 1 542 286 130 6 chr20 36115679 36115840 -36038042 + L3 LINE CR1 1396 1576 -1 2313 104 3 16 chr20 36115909 36116226 -36037656 - AluSq SINE Alu 0 313 1 248 230 14 81 chr20 36116651 36116725 -36037157 + MIR3 SINE MIR 127 195 -13 2458 86 3 0 chr20 36116863 36117165 -36036717 + AluSp SINE Alu 1 303 -10 384 264 86 1 chr20 36117165 36117285 -36036597 + MIR SINE MIR 22 150 -58 334 305 104 13 chr20 36117659 36117813 -36036069 + MIR SINE MIR 21 188 -74 1282 192 128 4 chr20 36117954 36118220 -36035662 - AluSx SINE Alu -13 299 1 398 305 14 14 chr20 36118400 36118541 -36035341 - L1MC/D LINE L1 -2093 5715 5575 309 306 29 65 chr20 36118574 36118744 -36035138 + L2 LINE L2 2288 2451 -863 1340 128 23 59 chr20 36118754 36118925 -36034957 - AluJo SINE Alu -13 299 136 2571 77 0 0 chr20 36118925 36119236 -36034646 - AluY SINE Alu 0 311 1 1340 128 23 59 chr20 36119236 36119283 -36034599 - AluJo SINE Alu -176 136 89 216 208 62 0 chr20 36119362 36119410 -36034472 + MIR3 SINE MIR 144 194 -14 493 260 37 60 chr20 36120041 36120183 -36033699 + MIR SINE MIR 3 147 -75 2423 98 3 0 chr20 36120183 36120488 -36033394 + AluSp SINE Alu 1 306 -7 2314 109 42 28 chr20 36120489 36120848 -36033034 + THE1B LTR MaLR 1 364 0 493 260 37 60 chr20 36120848 36120864 -36033018 + MIR SINE MIR 146 160 -62 343 226 189 0 chr20 36120880 36120986 -36032896 - L2 LINE L2 0 3313 3188 366 185 231 0 chr20 36121006 36121114 -36032768 + L2 LINE L2 3180 3312 -1 313 232 14 14 chr20 36121184 36121253 -36032629 + L2 LINE L2 3245 3313 0 1091 107 23 137 chr20 36121255 36121343 -36032539 - MER44D DNA MER2_type -1883 704 608 5225 117 78 128 chr20 36121343 36121656 -36032226 + Tigger3b DNA MER2_type 1 328 -2700 2352 82 16 10 chr20 36121656 36121962 -36031920 + AluY SINE Alu 1 308 -3 5225 117 78 128 chr20 36121962 36122535 -36031347 + Tigger3b DNA MER2_type 328 805 -2223 2226 96 0 63 chr20 36122535 36122677 -36031205 + AluSx SINE Alu 1 150 -162 2189 114 3 3 chr20 36122677 36122974 -36030908 + AluSx SINE Alu 1 297 -15 2226 96 0 63 chr20 36122974 36123164 -36030718 + AluSx SINE Alu 150 312 0 5225 117 78 128 chr20 36123164 36123570 -36030312 + Tigger3b DNA MER2_type 805 1230 -1 1091 107 23 137 chr20 36123570 36123628 -36030254 - MER44D DNA MER2_type -1979 608 545 1929 167 3 7 chr20 36123628 36123922 -36029960 - AluJb SINE Alu -19 293 1 1091 107 23 137 chr20 36123922 36124036 -36029846 - MER44D DNA MER2_type -2042 545 473 609 210 0 22 chr20 36124052 36124086 -36029796 - MER44D DNA MER2_type -2086 405 372 751 157 74 0 chr20 36124086 36124207 -36029675 - FLAM_C SINE Alu -3 130 1 609 210 0 22 chr20 36124207 36124310 -36029572 - MER44D DNA MER2_type -2119 372 1 185 321 0 0 chr20 36124386 36124439 -36029443 - L2 LINE L2 0 3313 3261 393 361 32 6 chr20 36124527 36124685 -36029197 - L2 LINE L2 -193 3079 2918 2204 98 0 49 chr20 36124821 36125126 -36028756 + AluSx SINE Alu 1 290 -22 261 83 0 0 chr20 36125887 36125923 -36027959 - U4 snRNA snRNA -1 144 109 2146 124 0 3 chr20 36125923 36126221 -36027661 + AluSx SINE Alu 1 297 -15 1139 66 0 0 chr20 36126254 36126390 -36027492 - AluSp SINE Alu -177 136 1 1779 241 44 19 chr20 36126477 36126951 -36026931 - LTR16C LTR ERVL -4 487 2 2499 67 3 3 chr20 36127022 36127319 -36026563 - AluSp SINE Alu -16 297 1 457 233 31 78 chr20 36127460 36127616 -36026266 - MIR SINE MIR -69 139 8 234 118 0 0 chr20 36127644 36127678 -36026204 - MIR3 SINE MIR -25 183 150 573 203 70 21 chr20 36127733 36127876 -36026006 + MER103 DNA DNA 10 159 -7 2087 143 0 0 chr20 36128933 36129227 -36024655 + AluSx SINE Alu 13 306 -6 262 243 66 88 chr20 36129343 36129479 -36024403 - MIR3 SINE MIR -61 147 15 2161 119 13 13 chr20 36130027 36130339 -36023543 + AluJb SINE Alu 1 312 0 306 267 62 95 chr20 36130561 36130688 -36023194 - MIR SINE MIR -33 229 112 2100 146 0 3 chr20 36130688 36130989 -36022893 + AluSx SINE Alu 1 300 -12 306 267 62 95 chr20 36130989 36131066 -36022816 - MIR SINE MIR -150 112 34 285 100 0 0 chr20 36131658 36131698 -36022184 + MER4D LTR ERV1 791 830 -73 423 262 115 8 chr20 36131887 36132030 -36021852 - MIR3 SINE MIR -75 133 1 2359 76 0 16 chr20 36132133 36132436 -36021446 - AluY SINE Alu -13 298 1 2271 102 10 0 chr20 36132624 36132919 -36020963 + AluYa5 SINE Alu 1 298 -13 2379 106 0 3 chr20 36132921 36133232 -36020650 + AluSx SINE Alu 3 312 0 377 198 52 0 chr20 36133313 36133409 -36020473 + L1MC5 LINE L1 7825 7925 -36 * 489 265 142 48 chr20 36133399 36133755 -36020127 + L1MEc LINE L1 1439 1760 -4455 1983 149 24 0 chr20 36133755 36134051 -36019831 + AluSx SINE Alu 1 303 -9 489 265 142 48 chr20 36134051 36134389 -36019493 + L1MEc LINE L1 1760 2065 -4150 2387 99 0 3 chr20 36134389 36134701 -36019181 + AluSx SINE Alu 1 311 -1 489 265 142 48 chr20 36134701 36134939 -36018943 + L1MEc LINE L1 2065 2417 -3798 447 287 47 13 chr20 36135227 36135377 -36018505 - MER5B DNA MER1_type -16 162 8 1053 186 5 10 chr20 36135394 36135598 -36018284 - MER3 DNA MER1_type -1 208 6 266 308 0 0 chr20 36135602 36135667 -36018215 + L2 LINE L2 3199 3263 -50 2260 89 28 0 chr20 36136317 36136608 -36017274 - AluSg SINE Alu -11 299 1 529 311 102 19 chr20 36136797 36137119 -36016763 + MLT1L LTR MaLR 214 562 -53 833 199 55 0 chr20 36137279 36137425 -36016457 - FRAM SINE Alu -22 154 1 1817 169 13 13 chr20 36137450 36137757 -36016125 - AluJb SINE Alu -1 311 5 196 284 161 0 chr20 36137758 36137839 -36016043 + MIR SINE MIR 110 203 -59 2167 134 3 3 chr20 36137881 36138186 -36015696 - AluSq SINE Alu -8 305 1 339 188 102 117 chr20 36138215 36138343 -36015539 + L2 LINE L2 3188 3313 0 613 272 126 31 chr20 36138889 36139278 -36014604 + L1ME1 LINE L1 5664 6085 -81 2257 90 27 7 chr20 36139278 36139577 -36014305 + AluSq SINE Alu 1 305 -8 244 301 78 39 chr20 36139812 36139915 -36013967 + MIR SINE MIR 96 202 -60 * 265 351 11 0 chr20 36139900 36139994 -36013888 - L2 LINE L2 -249 3023 2929 374 294 10 0 chr20 36141082 36141184 -36012698 - MIR SINE MIR 0 262 160 1802 179 75 41 chr20 36141232 36141674 -36012208 - LTR2B LTR ERV1 -2 488 32 2351 96 3 3 chr20 36141982 36142294 -36011588 + AluSq SINE Alu 1 312 -1 506 251 59 59 chr20 36142421 36142624 -36011258 + MIR3 SINE MIR 5 207 -1 340 125 0 0 chr20 36142694 36142742 -36011140 - Alu SINE Alu -254 48 1 2327 82 7 20 chr20 36142767 36143073 -36010809 + AluSg SINE Alu 1 302 -8 1570 196 82 94 chr20 36143148 36143659 -36010223 - MLT1D LTR MaLR 0 505 1 426 326 51 6 chr20 36144087 36144265 -36009617 + MIR SINE MIR 71 256 -6 478 284 52 0 chr20 36144616 36144750 -36009132 + MIR3 SINE MIR 30 170 -38 232 239 0 0 chr20 36144912 36144958 -36008924 + GA-rich Low_complexity Low_complexity 3 48 0 536 283 32 78 chr20 36144983 36145202 -36008680 - MIR SINE MIR -20 242 34 2113 119 0 7 chr20 36145645 36145950 -36007932 - AluSx SINE Alu 0 303 1 1699 195 47 0 chr20 36145956 36146254 -36007628 - AluJo SINE Alu 0 312 1 300 209 30 0 chr20 36146312 36146379 -36007503 + L1MB4 LINE L1 6106 6174 -6 426 20 0 0 chr20 36146401 36146452 -36007430 + (TCTCCC)n Simple_repeat Simple_repeat 1 51 0 5572 58 38 56 chr20 36146452 36147277 -36006605 + SVA Other Other 57 866 -520 1151 47 4 11 chr20 36147388 36147662 -36006220 + SVA Other Other 693 866 -592 6699 55 10 65 chr20 36147675 36148685 -36005197 + SVA Other Other 433 1386 0 1271 161 5 0 chr20 36148698 36148891 -36004991 + AluJo SINE Alu 1 194 -118 23 0 0 0 chr20 36148917 36148940 -36004942 + AT_rich Low_complexity Low_complexity 1 23 0 2373 92 20 0 chr20 36148976 36149279 -36004603 + AluSx SINE Alu 1 309 -3 1027 244 52 65 chr20 36149641 36149966 -36003916 + LTR37B LTR ERV1 1 320 -148 1803 142 20 30 chr20 36149966 36150269 -36003613 - AluJb SINE Alu -12 300 1 1027 244 52 65 chr20 36150269 36150389 -36003493 + LTR37B LTR ERV1 320 440 -28 2132 127 0 3 chr20 36150392 36150699 -36003183 - AluSx SINE Alu 0 306 1 317 288 54 18 chr20 36150754 36150865 -36003017 - MIR SINE MIR -62 200 86 420 323 78 18 chr20 36150930 36151097 -36002785 - L2 LINE L2 0 3272 3096 201 39 0 0 chr20 36151140 36151166 -36002716 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 333 174 104 87 chr20 36151216 36151331 -36002551 - L2 LINE L2 -188 3084 2968 1984 112 91 0 chr20 36151583 36151869 -36002013 - AluJo SINE Alu 0 312 1 1058 273 99 83 chr20 36151871 36151931 -36001951 + L1M4 LINE L1 4053 4111 -2035 2477 96 0 0 chr20 36151931 36152234 -36001648 - AluSx SINE Alu -9 303 1 1058 273 99 83 chr20 36152234 36152541 -36001341 + L1M4 LINE L1 4111 4412 -1734 2198 109 14 0 chr20 36152541 36152825 -36001057 + AluSx SINE Alu 1 288 -24 1058 273 99 83 chr20 36152825 36153182 -36000700 + L1M4 LINE L1 4412 4762 -1384 2483 87 3 0 chr20 36153182 36153494 -36000388 + AluSp SINE Alu 1 313 0 1058 273 99 83 chr20 36153494 36153898 -35999984 + L1M4 LINE L1 4762 5201 -945 1018 101 0 54 chr20 36153899 36154047 -35999835 + FLAM_C SINE Alu 1 140 -3 289 146 0 0 chr20 36154047 36154095 -35999787 - L1P3 LINE L1 -5790 671 624 859 151 7 0 chr20 36154101 36154247 -35999635 - Tigger3(Golem) DNA MER2_type -97 2932 2786 12184 81 12 15 chr20 36154253 36154724 -35999158 + L1PA7 LINE L1 5 476 -5985 2409 99 0 0 chr20 36154724 36155028 -35998854 + AluSg SINE Alu 1 304 -6 12184 81 12 15 chr20 36155028 36155413 -35998469 + L1PA7 LINE L1 476 860 -5601 2254 99 3 10 chr20 36155413 36155706 -35998176 + AluSx SINE Alu 7 297 -15 12184 81 12 15 chr20 36155706 36156825 -35997057 + L1PA7 LINE L1 860 1955 -4506 7947 71 12 6 chr20 36156825 36158659 -35995223 + L1PA7 LINE L1 4616 6469 0 1664 117 8 11 chr20 36158659 36158925 -35994957 - Tigger3(Golem) DNA MER2_type -239 2790 2526 462 282 14 21 chr20 36159351 36159493 -35994389 + MIR SINE MIR 6 146 -116 351 136 0 0 chr20 36159515 36159574 -35994308 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 709 146 9 0 chr20 36159576 36159809 -35994073 - FLAM_C SINE Alu 0 236 3 215 206 82 62 chr20 36159825 36159922 -35993960 + MIR SINE MIR 164 262 0 2293 93 7 0 chr20 36160489 36160778 -35993104 - AluSx SINE Alu -4 308 18 395 155 12 36 chr20 36160785 36160869 -35993013 + MIR SINE MIR 39 120 -142 780 155 7 42 chr20 36160872 36161014 -35992868 - FLAM_C SINE Alu -4 139 3 1113 150 9 62 chr20 36161014 36161261 -35992621 - AluJo SINE Alu 0 312 83 557 291 25 0 chr20 36161562 36161720 -35992162 + MIR SINE MIR 80 241 -21 2396 115 0 0 chr20 36161856 36162168 -35991714 + AluSx SINE Alu 1 312 0 1590 243 75 42 chr20 36162355 36162747 -35991135 + L1ME3A LINE L1 5377 5793 -377 1991 113 4 4 chr20 36162747 36163013 -35990869 - AluJb SINE Alu -19 293 28 1590 243 75 42 chr20 36163013 36163163 -35990719 + L1ME3A LINE L1 5793 5937 -233 2192 104 50 0 chr20 36163441 36163739 -35990143 + AluSq SINE Alu 1 313 0 1406 154 92 33 chr20 36164172 36164445 -35989437 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr20 36164445 36164471 -35989411 + AT_rich Low_complexity Low_complexity 1 26 0 1809 138 15 0 chr20 36164514 36164775 -35989107 - AluSx SINE Alu -14 298 34 669 234 37 103 chr20 36164793 36165066 -35988816 + MER112 DNA MER1_type 2 256 0 356 296 0 10 chr20 36165246 36165344 -35988538 + MIR SINE MIR 43 139 -69 214 240 0 0 chr20 36165506 36165556 -35988326 + GA-rich Low_complexity Low_complexity 1 50 0 543 198 136 19 chr20 36166494 36166656 -35987226 - MIR SINE MIR 0 262 82 2383 115 0 0 chr20 36167025 36167337 -35986545 - AluSx SINE Alu 0 312 1 186 333 14 0 chr20 36167337 36167406 -35986476 - L2 LINE L2 -248 3024 2955 364 270 251 14 chr20 36167558 36167769 -35986113 + MIR SINE MIR 2 262 0 180 250 0 0 chr20 36167801 36167837 -35986045 - L2 LINE L2 -565 2749 2714 283 122 24 0 chr20 36168072 36168125 -35985757 + MIR SINE MIR 100 153 -109 290 222 0 12 chr20 36168579 36168660 -35985222 + (CGGGG)n Simple_repeat Simple_repeat 5 84 0 2506 52 7 3 chr20 36169186 36169491 -35984391 - AluSx SINE Alu -6 306 1 30 45 0 0 chr20 36170922 36170966 -35982916 + AT_rich Low_complexity Low_complexity 1 44 0 214 324 178 36 chr20 36170973 36171048 -35982834 + L2 LINE L2 1751 1814 -1500 2152 97 59 0 chr20 36171048 36171337 -35982545 - AluSg SINE Alu -4 306 1 214 324 178 36 chr20 36171337 36171672 -35982210 + L2 LINE L2 1814 2219 -1095 2340 95 0 32 chr20 36171729 36172044 -35981838 + AluSx SINE Alu 1 305 -7 2907 10 0 0 chr20 36172115 36172422 -35981460 - AluYa5 SINE Alu -4 307 1 2562 59 0 7 chr20 36172557 36172863 -35981019 + AluY SINE Alu 1 304 -7 1773 134 36 14 chr20 36172879 36173155 -35980727 + AluJo SINE Alu 13 294 -18 284 323 8 30 chr20 36173190 36173323 -35980559 + L2 LINE L2 2263 2392 -922 575 332 12 43 chr20 36173514 36173571 -35980311 + LTR16A LTR ERVL 1 58 -392 2193 102 0 10 chr20 36173571 36173890 -35979992 + AluSq SINE Alu 1 313 0 575 332 12 43 chr20 36173890 36174085 -35979797 + LTR16A LTR ERVL 58 245 -205 296 292 170 0 chr20 36174130 36174273 -35979609 + LTR16A LTR ERVL 259 452 -12 2198 100 0 4 chr20 36174444 36174773 -35979109 - AluSx SINE Alu 0 330 3 215 304 32 64 chr20 36174788 36174864 -35979018 + L2 LINE L2 2758 2831 -483 2202 100 0 0 chr20 36174864 36175180 -35978702 - AluSg SINE Alu 0 316 1 215 304 32 64 chr20 36175180 36175227 -35978655 + L2 LINE L2 2831 2878 -436 556 288 54 55 chr20 36175375 36175828 -35978054 - LTR67 LTR ERVL -10 547 20 593 152 11 0 chr20 36175916 36176008 -35977874 - AluJb SINE Alu -20 292 200 2436 85 7 0 chr20 36176301 36176607 -35977275 + AluSx SINE Alu 1 308 -4 2322 163 21 14 chr20 36176792 36177215 -35976667 + MSTB LTR MaLR 1 426 0 807 97 44 65 chr20 36177365 36177544 -35976338 + L1M4 LINE L1 5300 5472 -702 5965 149 9 23 chr20 36177547 36178027 -35975855 + L1PB1 LINE L1 4526 5011 -1140 2393 63 3 26 chr20 36178027 36178329 -35975553 + AluY SINE Alu 1 295 -16 5965 149 9 23 chr20 36178329 36179490 -35974392 + L1PB1 LINE L1 5011 6150 -1 2603 158 40 19 chr20 36179498 36179896 -35973986 + L1MB7 LINE L1 5461 5872 -312 2274 94 10 0 chr20 36179896 36180194 -35973688 + AluSp SINE Alu 3 303 -10 2603 158 40 19 chr20 36180194 36180271 -35973611 + L1MB7 LINE L1 5872 5946 -238 2206 110 3 19 chr20 36180274 36180582 -35973300 + AluY SINE Alu 1 303 -8 1566 155 47 4 chr20 36180689 36180831 -35973051 - AluJb SINE Alu -43 269 110 207 0 0 0 chr20 36180831 36180854 -35973028 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1566 155 47 4 chr20 36180854 36180969 -35972913 - AluJb SINE Alu -202 110 1 319 327 0 10 chr20 36181012 36181113 -35972769 - MIR3 SINE MIR -102 106 7 229 257 228 0 chr20 36181350 36181451 -35972431 + MIR3 SINE MIR 79 202 -6 205 357 113 35 chr20 36181777 36182060 -35971822 - L2 LINE L2 -8 3264 2960 * 409 325 48 0 chr20 36182058 36182184 -35971698 + L2 LINE L2 3141 3272 0 4732 123 166 27 chr20 36182417 36183406 -35970476 + MER11B LTR ERVK 2 1232 -4 295 271 0 12 chr20 36183413 36183498 -35970384 + L2 LINE L2 3189 3272 0 514 277 84 6 chr20 36184217 36184383 -35969499 + L3 LINE CR1 1278 1456 -121 392 268 60 30 chr20 36184419 36184471 -35969411 - L3 LINE CR1 -300 1277 1228 2195 119 0 3 chr20 36184471 36184765 -35969117 - AluSc SINE Alu -15 294 2 392 268 60 30 chr20 36184765 36184880 -35969002 - L3 LINE CR1 -349 1228 1105 21 0 0 0 chr20 36184884 36184905 -35968977 + AT_rich Low_complexity Low_complexity 1 21 0 735 274 108 53 chr20 36184944 36185623 -35968259 - L2 LINE L2 -21 3292 2577 2546 219 59 48 chr20 36185623 36185885 -35967997 + L1ME3A LINE L1 5441 5699 -471 4004 111 39 0 chr20 36185885 36186443 -35967439 - LTR19B LTR ERV1 0 580 1 2546 219 59 48 chr20 36186443 36186774 -35967108 + L1ME3A LINE L1 5699 6046 -124 2437 94 0 0 chr20 36186774 36187081 -35966801 - AluSc SINE Alu -2 307 1 2546 219 59 48 chr20 36187081 36187198 -35966684 + L1ME3A LINE L1 6046 6160 -10 2699 229 73 60 chr20 36187211 36188173 -35965709 - L2 LINE L2 -849 2465 1492 1451 238 68 42 chr20 36188335 36188907 -35964975 + L1ME LINE L1 427 1013 -5057 734 178 8 0 chr20 36188913 36189031 -35964851 + 5S rRNA rRNA 1 119 -2 2280 132 0 0 chr20 36189146 36189456 -35964426 + AluSx SINE Alu 1 310 -2 2151 124 7 3 chr20 36189508 36189815 -35964067 + AluSx SINE Alu 3 310 -2 2384 221 65 30 chr20 36189815 36190560 -35963322 + L1ME LINE L1 1017 1790 -4290 15666 115 14 41 chr20 36190567 36190732 -35963150 + Tigger1 DNA MER2_type 1 169 -2249 836 173 0 0 chr20 36190732 36190865 -35963017 - FLAM_C SINE Alu 0 133 1 15666 115 14 41 chr20 36190865 36191155 -35962727 + Tigger1 DNA MER2_type 169 465 -1953 2458 77 0 0 chr20 36191155 36191452 -35962430 + AluSg SINE Alu 7 303 -7 15666 115 14 41 chr20 36191452 36191610 -35962272 + Tigger1 DNA MER2_type 465 626 -1792 2368 80 0 27 chr20 36191610 36191910 -35961972 + AluY SINE Alu 1 292 -19 15666 115 14 41 chr20 36191910 36192325 -35961557 + Tigger1 DNA MER2_type 626 1051 -1367 2193 125 0 3 chr20 36192325 36192621 -35961261 - AluSg SINE Alu -15 295 1 15666 115 14 41 chr20 36192621 36193076 -35960806 + Tigger1 DNA MER2_type 1051 1517 -901 2176 115 3 0 chr20 36193076 36193371 -35960511 + AluSg SINE Alu 1 296 -14 15666 115 14 41 chr20 36193371 36194248 -35959634 + Tigger1 DNA MER2_type 1517 2296 -122 1994 140 7 7 chr20 36194248 36194555 -35959327 - AluSx SINE Alu -5 307 1 15666 115 14 41 chr20 36194555 36194675 -35959207 + Tigger1 DNA MER2_type 2296 2418 0 695 227 39 89 chr20 36194677 36195013 -35958869 + L1ME LINE L1 1838 2154 -4107 2372 97 0 0 chr20 36195013 36195311 -35958571 + AluSx SINE Alu 1 298 -14 695 227 39 89 chr20 36195311 36195357 -35958525 + L1ME LINE L1 2154 2201 -4060 1392 229 42 16 chr20 36195407 36195856 -35958026 + L1ME LINE L1 2304 2764 -3316 1563 142 0 0 chr20 36195863 36196082 -35957800 + AluSg/x SINE Alu 85 303 -9 263 209 0 60 chr20 36196082 36196149 -35957733 + L1MEc LINE L1 2295 2357 -4039 1487 225 24 34 chr20 36196197 36196603 -35957279 + L1MEc LINE L1 2439 2841 -3374 1822 94 8 0 chr20 36196603 36196838 -35957044 + AluSp SINE Alu 1 237 -76 1487 225 24 34 chr20 36196838 36196897 -35956985 + L1MEc LINE L1 2841 2899 -3316 358 62 0 0 chr20 36196904 36196952 -35956930 + AluSp SINE Alu 85 132 -171 372 127 0 0 chr20 36196986 36197049 -35956833 + Tigger1 DNA MER2_type 2253 2315 -103 1321 112 0 0 chr20 36197081 36197251 -35956631 + AluSg/x SINE Alu 140 309 -3 2593 215 29 14 chr20 36197251 36197939 -35955943 + L1MEc LINE L1 2909 3606 -2609 408 125 0 0 chr20 36197948 36198012 -35955870 + (TCCC)n Simple_repeat Simple_repeat 3 66 0 495 198 0 10 chr20 36198031 36198127 -35955755 - AluJb SINE Alu 0 312 218 970 135 7 14 chr20 36198134 36198282 -35955600 - AluJb SINE Alu -165 147 1 1252 221 53 65 chr20 36198282 36198598 -35955284 + L1MEc LINE L1 3594 3905 -2310 2230 106 0 0 chr20 36198598 36198900 -35954982 + AluSx SINE Alu 1 302 0 1252 221 53 65 chr20 36198900 36199056 -35954826 + L1MEc LINE L1 3905 4061 -2154 314 312 0 0 chr20 36199062 36199078 -35954804 + L1MC4 LINE L1 6613 6628 -1414 2251 96 4 0 chr20 36199078 36199359 -35954523 + AluSp SINE Alu 1 282 -31 314 312 0 0 chr20 36199359 36199435 -35954447 + L1MC4 LINE L1 6627 6705 -1337 * 354 292 0 0 chr20 36199369 36199458 -35954424 - L1MC4 LINE L1 -1339 6703 6615 204 179 0 0 chr20 36199459 36199498 -35954384 + (TA)n Simple_repeat Simple_repeat 2 40 0 451 118 0 53 chr20 36199498 36199574 -35954308 - AluS SINE Alu -240 73 2 253 143 0 0 chr20 36199575 36199617 -35954265 + L1ME1 LINE L1 5230 5271 -875 180 0 0 0 chr20 36199636 36199656 -35954226 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 739 171 8 0 chr20 36199658 36199775 -35954107 - AluJb SINE Alu -193 119 2 4027 188 40 27 chr20 36199775 36199801 -35954081 + L1ME1 LINE L1 5261 5285 -881 2305 96 0 7 chr20 36199801 36200102 -35953780 + AluSg SINE Alu 5 303 -7 4027 188 40 27 chr20 36200102 36200962 -35952920 + L1ME1 LINE L1 5285 6158 -8 227 203 16 0 chr20 36200962 36201026 -35952856 + (TA)n Simple_repeat Simple_repeat 1 65 0 2339 109 0 0 chr20 36201132 36201434 -35952448 - AluSx SINE Alu -10 302 1 247 284 260 47 chr20 36202274 36202297 -35951585 - L2 LINE L2 0 3272 3255 2234 107 10 0 chr20 36202297 36202595 -35951287 + AluSx SINE Alu 1 301 -11 247 284 260 47 chr20 36202595 36202698 -35951184 - L2 LINE L2 -17 3255 3119 962 328 73 10 chr20 36202801 36203323 -35950559 - L2 LINE L2 -787 2527 1973 303 186 0 0 chr20 36203489 36203548 -35950334 - Charlie2 DNA MER1_type 0 2862 2804 1895 176 3 0 chr20 36203549 36203851 -35950031 + AluJo SINE Alu 1 303 -9 1894 179 0 7 chr20 36203867 36204169 -35949713 + AluJo SINE Alu 1 300 -12 712 226 115 46 chr20 36204247 36204306 -35949576 - Charlie2 DNA MER1_type -2503 279 225 2271 106 6 10 chr20 36204306 36204617 -35949265 - AluSx SINE Alu -2 310 1 712 226 115 46 chr20 36204617 36204818 -35949064 - Charlie2 DNA MER1_type -2557 225 1 241 246 62 31 chr20 36205115 36205180 -35948702 - MARNA DNA Mariner -9 577 511 2176 122 0 10 chr20 36205336 36205640 -35948242 + AluSq SINE Alu 1 301 -12 230 348 0 35 chr20 36205752 36205867 -35948015 - L2 LINE L2 -222 3050 2940 1027 167 0 11 chr20 36205904 36206084 -35947798 + MER45A DNA AcHobo 1 178 0 264 279 23 23 chr20 36206085 36206171 -35947711 - L2 LINE L2 -652 2662 2577 739 296 29 61 chr20 36206221 36206653 -35947229 - L1P4 LINE L1 -366 5802 5373 2014 143 7 7 chr20 36206653 36206947 -35946935 + AluSx SINE Alu 1 294 -18 739 296 29 61 chr20 36206947 36207054 -35946828 - L1P4 LINE L1 -795 5373 5264 26 0 0 0 chr20 36207051 36207077 -35946805 + AT_rich Low_complexity Low_complexity 1 26 0 * 411 270 26 106 chr20 36207307 36207396 -35946486 - L1MC4a LINE L1 -1634 6174 6079 2084 147 0 3 chr20 36207396 36207709 -35946173 + AluSx SINE Alu 1 312 0 411 270 26 106 chr20 36207709 36208009 -35945873 - L1MC4a LINE L1 -1729 6079 5819 2489 60 0 10 chr20 36208009 36208311 -35945571 + AluY SINE Alu 1 299 -12 411 270 26 106 chr20 36208311 36208346 -35945536 - L1MC4a LINE L1 -1989 5819 5783 2410 86 0 13 chr20 36208501 36208815 -35945067 - AluSx SINE Alu -2 310 1 206 228 54 87 chr20 36208951 36209043 -35944839 + L2 LINE L2 3012 3100 -172 384 279 224 0 chr20 36209220 36209381 -35944501 + MIR SINE MIR 16 212 -50 2488 83 3 0 chr20 36209520 36209832 -35944050 + AluSp SINE Alu 1 313 0 1267 196 0 0 chr20 36210285 36210504 -35943378 + AluJo SINE Alu 91 309 -3 207 69 0 0 chr20 36210515 36210544 -35943338 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 3075 228 125 21 chr20 36210625 36211532 -35942350 + L2 LINE L2 1455 2455 -859 348 232 37 0 chr20 36211955 36212037 -35941845 + L2 LINE L2 2465 2549 -765 1183 256 103 47 chr20 36212098 36212308 -35941574 + L2 LINE L2 2528 2725 -588 1028 204 6 118 chr20 36212308 36212637 -35941245 - AluJo SINE Alu -10 292 1 1183 256 103 47 chr20 36212637 36212921 -35940961 + L2 LINE L2 2725 2992 -321 180 0 0 0 chr20 36212921 36212941 -35940941 + (TC)n Simple_repeat Simple_repeat 1 20 0 1183 256 103 47 chr20 36212941 36213065 -35940817 + L2 LINE L2 2992 3108 -205 2226 117 0 3 chr20 36213065 36213393 -35940489 - AluSx SINE Alu 0 327 1 1183 256 103 47 chr20 36213393 36213519 -35940363 + L2 LINE L2 3108 3304 -9 249 118 78 20 chr20 36213589 36213640 -35940242 - Charlie1b DNA MER1_type -5 518 465 1072 181 0 0 chr20 36213640 36213806 -35940076 + FRAM SINE Alu 1 166 0 2233 108 0 20 chr20 36213813 36214119 -35939763 + AluSg SINE Alu 1 300 -10 1367 161 63 67 chr20 36214119 36214549 -35939333 - Charlie1b DNA MER1_type -22 501 74 295 371 127 22 chr20 36214586 36214861 -35939021 + L2 LINE L2 2969 3272 0 2263 114 3 0 chr20 36214865 36215163 -35938719 + AluSq SINE Alu 1 299 -14 1889 160 0 32 chr20 36215230 36215542 -35938340 - AluJb SINE Alu -10 302 1 2156 105 44 0 chr20 36215555 36215849 -35938033 - AluSx SINE Alu 0 312 6 1614 37 0 0 chr20 36215899 36216087 -35937795 + L1PA3 LINE L1 5968 6155 0 7230 33 1 1 chr20 36216092 36216965 -35936917 + L1PA4 LINE L1 5293 6165 0 430 284 122 7 chr20 36217043 36217191 -35936691 - MIR3 SINE MIR -24 184 20 2078 148 3 0 chr20 36217792 36218095 -35935787 - AluSx SINE Alu -8 304 1 623 301 93 18 chr20 36218564 36218790 -35935092 + MIR SINE MIR 20 262 0 207 254 55 36 chr20 36218965 36219020 -35934862 - MIR SINE MIR -187 75 20 263 28 28 0 chr20 36219081 36219117 -35934765 + (CA)n Simple_repeat Simple_repeat 2 38 0 202 322 24 97 chr20 36219256 36219629 -35934253 + L2 LINE L2 2922 3267 -5 21 82 0 0 chr20 36219724 36219773 -35934109 + GC_rich Low_complexity Low_complexity 1 49 0 896 249 62 40 chr20 36220052 36220325 -35933557 + L3 LINE CR1 1190 1468 -109 1187 241 15 11 chr20 36220386 36220647 -35933235 - MIR SINE MIR 0 262 1 507 312 6 13 chr20 36221188 36221345 -35932537 + MIR3 SINE MIR 11 166 -42 238 245 0 0 chr20 36221885 36221934 -35931948 + CT-rich Low_complexity Low_complexity 4 52 0 2281 99 0 0 chr20 36222663 36222990 -35930892 - AluSx SINE Alu 0 327 1 251 269 131 69 chr20 36223372 36223532 -35930350 - MIR3 SINE MIR -5 203 34 211 338 0 0 chr20 36224166 36224243 -35929639 - L3b LINE CR1 -190 1393 1317 295 281 18 44 chr20 36224311 36224425 -35929457 - MIR SINE MIR -60 202 92 2169 114 31 0 chr20 36224470 36224759 -35929123 + AluSx SINE Alu 1 298 -14 231 313 15 0 chr20 36225026 36225093 -35928789 + L2 LINE L2 3242 3309 -4 180 232 110 73 chr20 36225092 36225174 -35928708 + L2 LINE L2 3229 3313 0 * 342 331 73 49 chr20 36225187 36225575 -35928307 - L2 LINE L2 -153 3119 2704 304 111 93 0 chr20 36225684 36225738 -35928144 - AluJ/FLAM SINE Alu -230 72 14 1451 154 36 9 chr20 36225883 36226104 -35927778 + AluSx SINE Alu 59 285 -27 198 71 0 0 chr20 36226104 36226132 -35927750 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr20 36226243 36226272 -35927610 + AT_rich Low_complexity Low_complexity 1 29 0 235 256 12 24 chr20 36226374 36226456 -35927426 - L1MC5 LINE L1 -32 7929 7849 1602 149 0 4 chr20 36226458 36226700 -35927182 + AluJb SINE Alu 57 297 -15 524 320 72 20 chr20 36226704 36227101 -35926781 + L2 LINE L2 2784 3212 -101 373 307 55 60 chr20 36227227 36227445 -35926437 - L2 LINE L2 -266 3047 2831 1030 178 0 0 chr20 36227462 36227619 -35926263 + FRAM SINE Alu 2 158 -8 206 245 19 19 chr20 36227767 36227820 -35926062 - MIR3 SINE MIR -38 170 118 1928 156 0 0 chr20 36227835 36228111 -35925771 + AluJb SINE Alu 14 289 -23 2268 109 0 7 chr20 36228114 36228408 -35925474 + AluSq SINE Alu 1 292 -21 25 0 0 0 chr20 36228408 36228433 -35925449 + AT_rich Low_complexity Low_complexity 1 25 0 467 341 12 12 chr20 36228940 36229107 -35924775 + MIR3 SINE MIR 4 170 -38 272 222 34 111 chr20 36229345 36229392 -35924490 - MIR SINE MIR -81 127 78 2500 89 0 0 chr20 36229392 36229696 -35924186 + AluSx SINE Alu 1 304 -8 272 222 34 111 chr20 36229696 36229765 -35924117 - MIR SINE MIR -130 78 20 2510 175 47 2 chr20 36229841 36230310 -35923572 - MLT1D LTR MaLR -15 490 1 342 291 110 0 chr20 36230311 36230438 -35923444 - MIR SINE MIR -62 200 60 233 364 127 0 chr20 36230960 36231078 -35922804 - L2 LINE L2 -38 3234 3102 719 207 89 10 chr20 36231337 36231540 -35922342 + L2 LINE L2 2923 3141 -172 934 137 123 52 chr20 36231589 36231741 -35922141 - AluJo SINE Alu -2 310 137 2317 78 27 10 chr20 36231741 36232037 -35921845 - AluSc SINE Alu -8 301 1 934 137 123 52 chr20 36232037 36232095 -35921787 - AluJo SINE Alu -175 137 85 398 187 67 0 chr20 36232106 36232181 -35921701 + L2 LINE L2 3229 3308 -5 1670 125 90 35 chr20 36232245 36232534 -35921348 + AluJo SINE Alu 7 311 -1 242 357 10 0 chr20 36232538 36232636 -35921246 - L2 LINE L2 -815 2499 2401 186 287 50 79 chr20 36233355 36233456 -35920426 - L2 LINE L2 -9 3304 3207 708 310 61 58 chr20 36233484 36233829 -35920053 - L2 LINE L2 -1 3271 2926 231 61 0 0 chr20 36234002 36234035 -35919847 + (CA)n Simple_repeat Simple_repeat 2 34 0 2270 99 0 3 chr20 36234760 36235054 -35918828 + AluSx SINE Alu 12 304 -8 2373 103 0 3 chr20 36235596 36235897 -35917985 + AluSx SINE Alu 1 300 -12 378 324 57 72 chr20 36235897 36236215 -35917667 + L2 LINE L2 2953 3265 -7 523 306 125 53 chr20 36236219 36236312 -35917570 - L2 LINE L2 -22 3250 3165 258 32 0 0 chr20 36236312 36236343 -35917539 + (GGA)n Simple_repeat Simple_repeat 1 31 0 523 306 125 53 chr20 36236343 36236586 -35917296 - L2 LINE L2 -107 3165 2890 2464 83 3 0 chr20 36237140 36237440 -35916442 - AluSq SINE Alu -12 301 1 254 189 53 152 chr20 36237660 36237718 -35916164 - L1MC4 LINE L1 -6 8036 7974 204 40 0 0 chr20 36237718 36237743 -35916139 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1749 188 0 0 chr20 36237745 36238027 -35915855 - AluJo SINE Alu -30 282 1 254 189 53 152 chr20 36238027 36238097 -35915785 - L1MC4 LINE L1 -69 7973 7918 205 162 0 0 chr20 36238127 36238151 -35915731 + (TA)n Simple_repeat Simple_repeat 1 27 -10 2237 124 0 0 chr20 36238151 36238449 -35915433 - AluSx SINE Alu -14 298 1 205 162 0 0 chr20 36238449 36238461 -35915421 + (TA)n Simple_repeat Simple_repeat 26 37 0 349 174 12 47 chr20 36238524 36238610 -35915272 - L1MC4 LINE L1 -161 7881 7799 356 236 110 77 chr20 36238613 36238795 -35915087 - L1ME4a LINE L1 -126 5995 5808 2213 85 0 75 chr20 36238873 36239192 -35914690 + AluSc SINE Alu 1 295 -14 545 248 32 28 chr20 36239851 36240006 -35913876 + MIR3 SINE MIR 48 204 -4 195 214 24 0 chr20 36240086 36240128 -35913754 - L2 LINE L2 -1 3271 3229 226 319 144 64 chr20 36240206 36240818 -35913064 - L2 LINE L2 -1108 2206 1546 269 203 62 0 chr20 36240928 36240992 -35912890 + MIR3 SINE MIR 106 173 -35 2324 93 3 10 chr20 36241007 36241308 -35912574 - AluSx SINE Alu -13 299 1 201 196 59 0 chr20 36241876 36241927 -35911955 + MIR SINE MIR 78 131 -77 369 201 75 107 chr20 36242194 36242289 -35911593 + MIR SINE MIR 48 144 -118 2499 53 0 16 chr20 36242289 36242593 -35911289 - AluY SINE Alu -12 299 1 369 201 75 107 chr20 36242593 36242642 -35911240 + MIR SINE MIR 144 189 -73 1608 189 25 7 chr20 36242642 36242953 -35910929 - AluJb SINE Alu 0 312 1 369 201 75 107 chr20 36242953 36242966 -35910916 + MIR SINE MIR 189 201 -61 2367 115 0 10 chr20 36242979 36243293 -35910589 + AluSx SINE Alu 2 312 0 1496 135 157 22 chr20 36243293 36243602 -35910280 - MSTA LTR MaLR -33 395 40 272 311 84 34 chr20 36243617 36243736 -35910146 - L2 LINE L2 -12 3260 3136 2121 135 0 19 chr20 36243814 36244125 -35909757 - AluSq SINE Alu -8 305 1 232 265 29 0 chr20 36244125 36244184 -35909698 - L2 LINE L2 -523 2791 2728 359 293 43 35 chr20 36244211 36244389 -35909493 - MIR SINE MIR -51 211 31 541 138 11 11 chr20 36245051 36245145 -35908737 + AluJ/FRAM SINE Alu 214 307 -5 340 215 35 58 chr20 36245448 36245620 -35908262 + (CTGGGG)n Simple_repeat Simple_repeat 6 173 0 401 211 22 67 chr20 36245640 36245820 -35908062 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 225 0 0 0 chr20 36245971 36245996 -35907886 + (T)n Simple_repeat Simple_repeat 1 25 0 278 257 99 48 chr20 36246161 36246287 -35907595 + MIR SINE MIR 23 172 -63 2422 87 3 0 chr20 36246571 36246871 -35907011 - AluSq SINE Alu -12 301 1 2437 91 0 0 chr20 36247751 36248047 -35905835 + AluSq SINE Alu 1 296 -17 394 176 15 0 chr20 36248464 36248532 -35905350 + MIR3 SINE MIR 119 187 -21 667 291 0 19 chr20 36248910 36249068 -35904814 - MIR SINE MIR -101 161 7 461 235 30 105 chr20 36249076 36249140 -35904742 - MER5A DNA MER1_type -3 186 119 2407 79 20 0 chr20 36249140 36249443 -35904439 + AluSq SINE Alu 1 309 -4 461 235 30 105 chr20 36249443 36249578 -35904304 - MER5A DNA MER1_type -70 119 2 211 304 0 14 chr20 36249613 36249682 -35904200 - MER5A DNA MER1_type -24 165 98 242 173 58 0 chr20 36250141 36250193 -35903689 - L2 LINE L2 -12 3301 3247 1239 249 83 37 chr20 36250736 36251464 -35902418 - L1MC5 LINE L1 -30 7931 7260 2244 82 0 4 chr20 36251624 36251904 -35901978 + AluSx SINE Alu 25 303 -9 198 274 36 36 chr20 36251954 36252038 -35901844 - MER5A DNA MER1_type -103 86 3 285 260 89 112 chr20 36252086 36252344 -35901538 - L2 LINE L2 -88 3184 2933 631 254 142 10 chr20 36252572 36252769 -35901113 - MIR SINE MIR -32 230 8 446 221 177 44 chr20 36254069 36254250 -35899632 - MIR SINE MIR -52 210 6 2388 98 0 3 chr20 36254498 36254804 -35899078 - AluSx SINE Alu -7 305 1 8463 57 1 0 chr20 36254826 36255794 -35898088 - LTR5 LTR ERVK 0 969 1 304 270 145 98 chr20 36255794 36256429 -35897453 + L2 LINE L2 2598 3269 -3 224 307 0 13 chr20 36256903 36256978 -35896904 + CT-rich Low_complexity Low_complexity 1 74 0 2311 98 0 49 chr20 36257112 36257439 -35896443 + AluSx SINE Alu 1 311 -1 422 282 26 39 chr20 36257715 36257871 -35896011 - L2 LINE L2 -742 2572 2419 1988 75 4 4 chr20 36257901 36258156 -35895726 + AluSx SINE Alu 42 296 -16 23 97 0 0 chr20 36258225 36258297 -35895585 + AT_rich Low_complexity Low_complexity 1 72 0 910 83 0 56 chr20 36258297 36258441 -35895441 + AluJo SINE Alu 1 136 -176 512 183 0 67 chr20 36258485 36258605 -35895277 - MER3 DNA MER1_type -97 112 1 240 133 0 22 chr20 36258610 36258649 -35895233 - L2 LINE L2 -1100 2214 2177 525 193 20 139 chr20 36258649 36258760 -35895122 - MER5B DNA MER1_type 0 178 100 2125 98 0 50 chr20 36258760 36259078 -35894804 + AluSx SINE Alu 5 306 -6 525 193 20 139 chr20 36259078 36259168 -35894714 - MER5B DNA MER1_type -78 100 1 473 197 92 21 chr20 36259170 36259312 -35894570 - L2 LINE L2 -1132 2182 2031 574 238 143 36 chr20 36259338 36259506 -35894376 + MER5A DNA MER1_type 4 189 0 186 236 55 45 chr20 36259506 36259611 -35894271 - L2 LINE L2 -1417 1897 1792 199 342 59 0 chr20 36260376 36260478 -35893404 + MIR SINE MIR 87 193 -58 1007 304 65 12 chr20 36260648 36261066 -35892816 - LTR16A LTR ERVL 0 450 11 224 326 70 0 chr20 36261126 36261212 -35892670 + MIR SINE MIR 24 115 -93 215 191 22 101 chr20 36261358 36261447 -35892435 - MIR SINE MIR -69 193 112 2403 75 0 3 chr20 36261447 36261752 -35892130 + AluY SINE Alu 1 304 -7 218 380 0 0 chr20 36261852 36261931 -35891951 - MIR SINE MIR -5 257 179 188 293 12 61 chr20 36262641 36262723 -35891159 + MIR3 SINE MIR 111 188 -20 197 345 36 43 chr20 36263159 36263298 -35890584 - L2 LINE L2 -457 2857 2720 2204 105 0 0 chr20 36263460 36263754 -35890128 + AluSp SINE Alu 1 294 -19 1765 157 3 20 chr20 36264938 36265232 -35888650 - AluJo SINE Alu -15 297 9 623 281 81 30 chr20 36265422 36265657 -35888225 + MIR SINE MIR 15 261 -1 1907 138 0 14 chr20 36265841 36266123 -35887759 + AluJo SINE Alu 29 306 -6 194 327 118 20 chr20 36269044 36269197 -35884685 - MIR SINE MIR -14 248 81 499 73 16 73 chr20 36270472 36270595 -35883287 + (CTGGGG)n Simple_repeat Simple_repeat 2 117 0 21 0 0 0 chr20 36270607 36270628 -35883254 + GC_rich Low_complexity Low_complexity 1 21 0 804 135 32 0 chr20 36271181 36271307 -35882575 + AluJ SINE Alu 1 130 -172 719 186 0 0 chr20 36271308 36271432 -35882450 + AluJ SINE Alu 184 307 -5 2554 44 0 19 chr20 36273814 36274130 -35879752 + AluY SINE Alu 2 311 0 1052 240 26 58 chr20 36274131 36274166 -35879716 + L1ME3A LINE L1 5438 5473 -697 2014 133 3 3 chr20 36274166 36274460 -35879422 - AluSx SINE Alu -18 294 1 1052 240 26 58 chr20 36274460 36274705 -35879177 + L1ME3A LINE L1 5473 5703 -467 2384 70 0 3 chr20 36274705 36275003 -35878879 - AluY SINE Alu -14 297 1 1052 240 26 58 chr20 36275003 36275137 -35878745 + L1ME3A LINE L1 5703 5840 -330 1933 115 0 18 chr20 36275307 36275586 -35878296 - AluSp SINE Alu -1 312 39 26 50 0 0 chr20 36275597 36275637 -35878245 + AT_rich Low_complexity Low_complexity 1 40 0 197 306 20 41 chr20 36275650 36275724 -35878158 + L3 LINE CR1 1302 1375 -202 2179 79 26 10 chr20 36275724 36276029 -35877853 + AluSq SINE Alu 1 310 -3 197 306 20 41 chr20 36276029 36276052 -35877830 + L3 LINE CR1 1375 1397 -180 1730 195 0 3 chr20 36276232 36276539 -35877343 + AluJo SINE Alu 1 306 -6 263 331 87 8 chr20 36276558 36276685 -35877197 + MIR SINE MIR 76 212 -50 404 151 0 12 chr20 36278563 36278649 -35875233 + (ATG)n Simple_repeat Simple_repeat 1 85 0 189 260 62 83 chr20 36278673 36278865 -35875017 + L2 LINE L2 2872 3059 -213 288 0 0 0 chr20 36279069 36279101 -35874781 + (TG)n Simple_repeat Simple_repeat 2 33 0 201 277 92 0 chr20 36280885 36280950 -35872932 + MIR3 SINE MIR 117 187 -21 250 290 0 14 chr20 36281036 36281105 -35872777 + L2 LINE L2 3205 3272 0 1349 136 35 84 chr20 36281881 36282051 -35871831 - AluJo SINE Alu -17 295 143 2154 120 7 0 chr20 36282051 36282351 -35871531 - AluSg SINE Alu -8 302 1 1349 136 35 84 chr20 36282351 36282467 -35871415 - AluJo SINE Alu -169 143 23 558 303 30 6 chr20 36283087 36283252 -35870630 + MIR SINE MIR 31 199 -63 338 229 35 112 chr20 36283964 36284134 -35869748 + MIR3 SINE MIR 16 172 -36 483 187 37 0 chr20 36284390 36284497 -35869385 + MIR3 SINE MIR 52 162 -46 195 100 0 0 chr20 36285422 36285452 -35868430 + (CA)n Simple_repeat Simple_repeat 2 31 0 204 254 0 36 chr20 36285909 36285964 -35867918 - MER5A DNA MER1_type -46 143 91 1877 158 3 19 chr20 36285983 36286293 -35867589 - AluJo SINE Alu -7 305 1 533 194 0 20 chr20 36286294 36286392 -35867490 - FRAM SINE Alu -14 162 67 2561 148 29 65 chr20 36287415 36287468 -35866414 - L1MB3 LINE L1 -1 6182 6129 2123 115 0 13 chr20 36287468 36287773 -35866109 + AluSx SINE Alu 1 301 -11 779 168 0 0 chr20 36287773 36287892 -35865990 - AluJo/FLAM SINE Alu -183 119 1 2561 148 29 65 chr20 36287892 36288356 -35865526 - L1MB3 LINE L1 -52 6131 5683 206 289 10 21 chr20 36288497 36288594 -35865288 + (TG)n Simple_repeat Simple_repeat 1 96 0 370 324 108 0 chr20 36289744 36289948 -35863934 + MIR SINE MIR 28 253 -9 336 188 62 0 chr20 36290373 36290437 -35863445 - L2 LINE L2 -93 3179 3112 2299 93 0 10 chr20 36292009 36292320 -35861562 + AluSq SINE Alu 1 308 -5 22 0 0 0 chr20 36293529 36293551 -35860331 + AT_rich Low_complexity Low_complexity 1 22 0 1926 143 28 0 chr20 36293653 36293940 -35859942 - AluJo SINE Alu -17 295 1 366 327 31 38 chr20 36294284 36294443 -35859439 - L2 LINE L2 0 3272 3115 312 194 16 0 chr20 36294464 36294526 -35859356 + AluJ/FLAM SINE Alu 1 63 -239 456 323 12 18 chr20 36294959 36295123 -35858759 + L3 LINE CR1 1413 1575 -2 333 357 30 18 chr20 36297160 36297328 -35856554 + MIR SINE MIR 39 208 -54 272 299 159 45 chr20 36297777 36297978 -35855904 + L2 LINE L2 3044 3267 -5 182 242 91 0 chr20 36298738 36298804 -35855078 - L2 LINE L2 -2551 763 692 199 324 44 0 chr20 36299060 36299128 -35854754 + L2 LINE L2 3200 3270 -2 316 229 145 61 chr20 36299628 36299759 -35854123 - MIR3 SINE MIR -9 199 58 564 269 41 18 chr20 36300557 36300728 -35853154 + MIR SINE MIR 17 191 -71 2089 107 4 4 chr20 36301417 36301727 -35852155 - AluSx SINE Alu 0 310 1 226 184 41 0 chr20 36301729 36301778 -35852104 - MIR SINE MIR -114 148 98 1667 152 7 7 chr20 36301892 36302162 -35851720 + AluJb SINE Alu 30 299 -13 292 339 102 0 chr20 36302491 36302609 -35851273 - L2 LINE L2 -5 3308 3179 468 286 201 28 chr20 36302693 36302976 -35850906 + L2 LINE L2 2982 3313 0 2311 86 0 10 chr20 36303078 36303381 -35850501 + AluSc SINE Alu 4 303 -6 2238 88 0 20 chr20 36303406 36303711 -35850171 - AluY SINE Alu -12 299 1 617 157 216 0 chr20 36304079 36304232 -35849650 + MER3 DNA MER1_type 1 186 -23 471 269 154 0 chr20 36304257 36304413 -35849469 + MER5A DNA MER1_type 9 188 -1 483 250 64 14 chr20 36304421 36304561 -35849321 + MER5B DNA MER1_type 21 167 -11 231 333 109 14 chr20 36304563 36304701 -35849181 + MER5B DNA MER1_type 20 170 -8 1897 133 18 18 chr20 36305466 36305803 -35848079 + L1MB3 LINE L1 5847 6183 0 2500 68 0 0 chr20 36305808 36306115 -35847767 + AluY SINE Alu 1 307 -4 292 268 95 45 chr20 36306115 36306294 -35847588 + L1MC4a LINE L1 5821 6008 -1800 1842 128 42 21 chr20 36306332 36306621 -35847261 - AluSx SINE Alu -17 295 1 2088 101 44 0 chr20 36306668 36306965 -35846917 - AluSx SINE Alu -2 310 1 324 344 89 67 chr20 36307704 36308120 -35845762 - L2 LINE L2 -23 3249 2825 2011 121 21 3 chr20 36308322 36308612 -35845270 + AluJb SINE Alu 1 295 -17 341 254 88 18 chr20 36309045 36309159 -35844723 - MIR3 SINE MIR -86 122 1 211 356 0 33 chr20 36309252 36309342 -35844540 + MIR SINE MIR 17 103 -105 2428 77 0 0 chr20 36309353 36309651 -35844231 - AluY SINE Alu -13 298 1 2341 84 0 7 chr20 36309653 36309951 -35843931 - AluSx SINE Alu -16 296 1 319 296 45 23 chr20 36310338 36310470 -35843412 + L2 LINE L2 3138 3272 0 499 285 97 0 chr20 36310918 36311083 -35842799 - MIR3 SINE MIR -24 184 4 455 310 98 10 chr20 36312957 36313160 -35840722 - MIR SINE MIR -8 254 34 288 0 0 0 chr20 36313966 36313998 -35839884 + (TG)n Simple_repeat Simple_repeat 1 32 0 654 217 0 0 chr20 36314287 36314407 -35839475 + FLAM_C SINE Alu 2 121 -22 344 217 5 162 chr20 36315050 36315165 -35838717 - MIR SINE MIR -64 198 125 2123 123 10 3 chr20 36315165 36315475 -35838407 + AluSx SINE Alu 1 312 0 344 217 5 162 chr20 36315475 36315557 -35838325 - MIR SINE MIR -137 125 32 2509 58 0 0 chr20 36315566 36315860 -35838022 - AluY SINE Alu -17 294 1 753 199 0 0 chr20 36316686 36316817 -35837065 + FLAM_C SINE Alu 1 131 -2 225 322 78 11 chr20 36316903 36316993 -35836889 + LTR67 LTR ERVL 429 524 -33 * 389 96 0 0 chr20 36316985 36317037 -35836845 - AluSg/x SINE Alu -117 183 132 2452 73 0 0 chr20 36317037 36317339 -35836543 - AluY SINE Alu -9 302 1 3943 162 22 23 chr20 36317356 36318085 -35835797 + L1MB4 LINE L1 5450 6177 -3 311 361 66 0 chr20 36318268 36318390 -35835492 - L2 LINE L2 -9 3263 3134 180 143 0 0 chr20 36318564 36318606 -35835276 + (A)n Simple_repeat Simple_repeat 1 42 0 342 281 26 35 chr20 36320128 36320242 -35833640 - MIR SINE MIR -75 133 21 2196 123 3 7 chr20 36320431 36320741 -35833141 + AluSx SINE Alu 1 309 -3 639 219 71 71 chr20 36321140 36321364 -35832518 - MIR SINE MIR -37 225 2 316 270 60 0 chr20 36321810 36321910 -35831972 - L2 LINE L2 -9 3304 3199 295 172 31 16 chr20 36322763 36322827 -35831055 - L2 LINE L2 0 3313 3249 221 311 66 28 chr20 36322980 36323086 -35830796 + MIR3 SINE MIR 58 167 -41 22 0 0 0 chr20 36324108 36324130 -35829752 + AT_rich Low_complexity Low_complexity 1 22 0 254 301 90 38 chr20 36324398 36324531 -35829351 - L2 LINE L2 -8 3264 3125 432 279 169 10 chr20 36324591 36324792 -35829090 - MIR SINE MIR -2 260 28 429 299 40 11 chr20 36325867 36326044 -35827838 + MIR SINE MIR 59 240 -22 347 311 187 42 chr20 36327152 36327441 -35826441 + L2 LINE L2 2922 3252 -20 211 238 350 0 chr20 36327567 36327647 -35826235 - MIR3 SINE MIR -4 204 97 1054 191 37 25 chr20 36327908 36328149 -35825733 + L1MB7 LINE L1 5585 5828 -356 1669 165 106 3 chr20 36328199 36328538 -35825344 + L1MB7 LINE L1 5811 6184 0 647 173 63 24 chr20 36328610 36328737 -35825145 + AluJb SINE Alu 2 133 -179 343 284 39 10 chr20 36328874 36328976 -35824906 + MIR SINE MIR 4 108 -154 1955 203 96 36 chr20 36328983 36329452 -35824430 + MLT1D LTR MaLR 4 500 -5 414 227 60 40 chr20 36329452 36329602 -35824280 + MIR SINE MIR 110 262 0 544 162 61 74 chr20 36329823 36329902 -35823980 - MER5A DNA MER1_type -36 153 75 2284 117 0 0 chr20 36329902 36330200 -35823682 - AluSg SINE Alu -12 298 1 544 162 61 74 chr20 36330200 36330268 -35823614 - MER5A DNA MER1_type -114 75 8 461 298 7 14 chr20 36331104 36331245 -35822637 + MIR3 SINE MIR 16 155 -53 2175 107 6 22 chr20 36331278 36331595 -35822287 + AluSx SINE Alu 1 312 0 27 0 0 0 chr20 36331595 36331622 -35822260 + AT_rich Low_complexity Low_complexity 1 27 0 215 344 147 6 chr20 36332103 36332266 -35821616 - L2 LINE L2 -222 3050 2865 321 136 80 57 chr20 36332461 36332549 -35821333 + L1MC4 LINE L1 7867 7956 -86 542 195 54 27 chr20 36332575 36332724 -35821158 - L1MC4 LINE L1 -97 7945 7793 881 221 23 0 chr20 36333236 36333408 -35820474 - AluJo SINE Alu -50 262 87 393 121 0 47 chr20 36333640 36333722 -35820160 + AluS SINE Alu 2 62 -237 200 330 126 39 chr20 36434021 36434124 -35719758 - MIR3 SINE MIR -53 155 44 207 0 0 0 chr20 36434139 36434162 -35719720 + (TG)n Simple_repeat Simple_repeat 2 24 0 450 333 20 15 chr20 36434188 36434389 -35719493 + L2 LINE L2 2857 3058 -214 1183 97 11 17 chr20 36434461 36434637 -35719245 - AluSg/x SINE Alu -9 303 129 214 363 40 24 chr20 36434682 36434806 -35719076 + L2 LINE L2 3173 3298 -15 268 210 16 16 chr20 36434948 36435010 -35718872 + L3 LINE CR1 1407 1468 -109 461 329 19 6 chr20 36436741 36436899 -35716983 + MIR SINE MIR 71 230 -32 1857 136 0 45 chr20 36436922 36437232 -35716650 + AluJb SINE Alu 1 296 -16 240 193 64 83 chr20 36438539 36438648 -35715234 + MIR3 SINE MIR 81 187 -21 215 81 54 0 chr20 36439059 36439096 -35714786 + GA-rich Low_complexity Low_complexity 2 40 0 1091 152 11 11 chr20 36439380 36439558 -35714324 + L1MB3 LINE L1 6004 6181 -2 251 252 68 39 chr20 36439558 36439661 -35714221 + MER5A DNA MER1_type 66 171 -18 239 253 168 0 chr20 36439677 36439772 -35714110 + MIR SINE MIR 131 241 -21 190 356 14 0 chr20 36439856 36439929 -35713953 - L3 LINE CR1 -122 1455 1382 293 218 115 13 chr20 36441024 36441102 -35712780 - MIR SINE MIR -58 150 65 621 243 92 10 chr20 36441203 36441409 -35712473 - MIR SINE MIR -12 250 28 532 296 45 0 chr20 36443207 36443386 -35710496 - MIR SINE MIR -37 225 39 521 42 14 0 chr20 36443563 36443635 -35710247 + (TG)n Simple_repeat Simple_repeat 1 73 0 498 280 21 0 chr20 36444067 36444210 -35709672 + MIR SINE MIR 117 262 0 4776 220 30 45 chr20 36444543 36444701 -35709181 - L1MB8 LINE L1 -6 6408 6249 1996 124 7 0 chr20 36444701 36444999 -35708883 - AluSx SINE Alu -12 300 1 4776 220 30 45 chr20 36444999 36445677 -35708205 - L1MB8 LINE L1 -165 6249 5562 2703 159 45 12 chr20 36445677 36446187 -35707695 - L1MB3 LINE L1 -2 6181 5655 4776 220 30 45 chr20 36446187 36446331 -35707551 - L1MB8 LINE L1 -852 5562 5417 867 238 0 0 chr20 36446331 36446491 -35707391 - FRAM SINE Alu -6 160 1 4776 220 30 45 chr20 36446491 36447859 -35706023 - L1MB8 LINE L1 -997 5417 1269 809 272 5 5 chr20 36448470 36448672 -35705210 - MIR SINE MIR -41 221 20 229 324 81 0 chr20 36448690 36448764 -35705118 + L1MC3 LINE L1 6704 6783 -1002 375 353 20 13 chr20 36449880 36450030 -35703852 - L2 LINE L2 -5 3308 3158 626 156 62 129 chr20 36450140 36450178 -35703704 - ORSL DNA AcHobo -36 239 200 2293 107 0 0 chr20 36450178 36450487 -35703395 - AluSx SINE Alu -3 309 1 626 156 62 129 chr20 36450487 36450612 -35703270 - ORSL DNA AcHobo -75 200 68 583 62 18 26 chr20 36450612 36450725 -35703157 + (TA)n Simple_repeat Simple_repeat 2 113 0 2192 109 0 0 chr20 36450725 36451029 -35702853 - AluSx SINE Alu -8 304 1 626 156 62 129 chr20 36451029 36451119 -35702763 - ORSL DNA AcHobo -205 70 1 2176 121 0 6 chr20 36452369 36452684 -35701198 + AluSq SINE Alu 1 313 0 436 175 21 0 chr20 36452804 36452901 -35700981 + GA-rich Low_complexity Low_complexity 4 102 0 192 333 0 16 chr20 36453047 36453110 -35700772 + L2 LINE L2 3208 3269 -3 783 236 14 33 chr20 36453257 36453469 -35700413 + MIR SINE MIR 22 229 -33 1952 122 22 0 chr20 36453507 36453818 -35700064 - AluSx SINE Alu 0 317 1 222 182 0 23 chr20 36454580 36454624 -35699258 + L2 LINE L2 3017 3059 -213 201 320 110 10 chr20 36454869 36454969 -35698913 + MIR SINE MIR 35 144 -118 187 318 0 0 chr20 36454998 36455042 -35698840 + L2 LINE L2 3210 3253 -19 205 240 40 0 chr20 36455245 36455295 -35698587 + (CATG)n Simple_repeat Simple_repeat 1 52 0 253 335 90 0 chr20 36455295 36455462 -35698420 + L2 LINE L2 2902 3083 -189 399 332 30 25 chr20 36455908 36456107 -35697775 + MIR SINE MIR 22 221 -41 216 231 19 0 chr20 36456655 36456707 -35697175 + CT-rich Low_complexity Low_complexity 2 54 0 207 256 195 0 chr20 36456713 36456795 -35697087 - MIR SINE MIR -152 110 13 267 268 0 0 chr20 36457241 36457297 -35696585 + MIR SINE MIR 204 259 -3 862 209 87 0 chr20 36457408 36457614 -35696268 - MIR SINE MIR -20 242 19 281 274 49 29 chr20 36457721 36457823 -35696059 - MIR SINE MIR -83 125 22 220 403 0 17 chr20 36458019 36458138 -35695744 + MIR SINE MIR 82 198 -64 384 223 10 68 chr20 36458229 36458332 -35695550 + MER5A DNA MER1_type 9 105 -84 225 330 99 0 chr20 36458751 36458842 -35695040 + L3b LINE CR1 1288 1387 -196 227 343 78 10 chr20 36458921 36459023 -35694859 - MIR3 SINE MIR -22 186 78 232 200 120 53 chr20 36459376 36459451 -35694431 + MIR3 SINE MIR 81 160 -48 377 312 71 24 chr20 36459451 36459621 -35694261 - MER5B DNA MER1_type 0 178 1 243 0 0 0 chr20 36460509 36460536 -35693346 + (TC)n Simple_repeat Simple_repeat 1 27 0 213 121 0 0 chr20 36460536 36460569 -35693313 + (CA)n Simple_repeat Simple_repeat 2 34 0 255 301 226 0 chr20 36460573 36460666 -35693216 - MIR SINE MIR -63 145 32 409 236 152 36 chr20 36460949 36461114 -35692768 + MIR SINE MIR 9 192 -70 423 320 27 16 chr20 36461419 36461629 -35692253 - MIR SINE MIR -48 214 1 189 252 204 19 chr20 36462579 36462682 -35691200 + MIR SINE MIR 25 146 -62 332 296 93 81 chr20 36463369 36463852 -35690030 + L2 LINE L2 2423 2911 -403 813 251 195 42 chr20 36463924 36464330 -35689552 - L2 LINE L2 -10 3303 2836 481 226 7 90 chr20 36465166 36465212 -35688670 - MIR3 SINE MIR -11 197 149 420 281 118 11 chr20 36465212 36465390 -35688492 - MER117 DNA MER1_type 0 197 1 481 226 7 90 chr20 36465390 36465498 -35688384 - MIR3 SINE MIR -59 149 56 278 319 32 0 chr20 36465712 36465806 -35688076 + L2 LINE L2 3141 3237 -35 234 270 130 17 chr20 36466013 36466128 -35687754 - MIR3 SINE MIR -79 129 2 512 219 17 0 chr20 36466527 36466646 -35687236 + MIR SINE MIR 33 153 -55 477 264 82 6 chr20 36466708 36466867 -35687015 + MER5A DNA MER1_type 1 171 -18 508 210 23 10 chr20 36467531 36467662 -35686220 + MIR SINE MIR 37 163 -45 467 196 82 2 chr20 36468032 36468186 -35685696 + MIR SINE MIR 13 175 -68 221 295 0 33 chr20 36468302 36468363 -35685519 - MIR SINE MIR -60 148 90 240 269 13 67 chr20 36470292 36470441 -35683441 + CT-rich Low_complexity Low_complexity 1 141 0 226 343 52 22 chr20 36470967 36471101 -35682781 + MIR SINE MIR 100 237 -25 382 281 33 25 chr20 36471258 36471379 -35682503 + L2 LINE L2 3151 3272 0 405 238 69 3 chr20 36471489 36471667 -35682215 + MIR SINE MIR 22 255 -7 2289 90 3 3 chr20 36471724 36472035 -35681847 + AluY SINE Alu 1 311 0 294 250 38 0 chr20 36472594 36472674 -35681208 - MIR3 SINE MIR -32 176 94 476 357 39 0 chr20 36472763 36472945 -35680937 + MIR SINE MIR 5 193 -69 2363 112 0 0 chr20 36576294 36576607 -35577275 + AluSq SINE Alu 1 313 0 669 106 39 0 chr20 36576920 36577024 -35576858 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 860 139 110 25 chr20 36577015 36577260 -35576622 + Tigger3(Golem) DNA MER2_type 2277 2542 -487 271 233 14 14 chr20 36577233 36577306 -35576576 + AluSp SINE Alu 122 194 -109 * 2171 116 23 0 chr20 36577324 36577625 -35576257 + AluSx SINE Alu 1 308 -4 1408 167 41 0 chr20 36577677 36577898 -35575984 + AluJb SINE Alu 66 295 -17 1366 146 45 150 chr20 36577899 36578139 -35575743 + Tigger3(Golem) DNA MER2_type 2588 2751 -277 2001 149 0 0 chr20 36578139 36578434 -35575448 - AluSg SINE Alu -15 295 1 1366 146 45 150 chr20 36578434 36578686 -35575196 + Tigger3(Golem) DNA MER2_type 2751 3028 0 2239 106 3 0 chr20 36578703 36578996 -35574886 - AluSq SINE Alu -17 296 3 941 93 16 8 chr20 36578997 36579126 -35574756 - AluSq/x SINE Alu -176 136 7 995 163 93 73 chr20 36581661 36581974 -35571908 + MER33 DNA MER1_type 2 320 -4 199 179 51 0 chr20 36582026 36582065 -35571817 + MIR SINE MIR 156 196 -66 369 298 18 0 chr20 36582110 36582224 -35571658 + MIR SINE MIR 91 206 -56 243 0 0 0 chr20 36582287 36582314 -35571568 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1672 91 0 5 chr20 36582324 36582544 -35571338 - AluSq SINE Alu -94 219 1 245 208 75 0 chr20 36582546 36582599 -35571283 - MIR SINE MIR -98 164 108 771 237 36 10 chr20 36582813 36583007 -35570875 + Charlie8 DNA MER1_type 67 265 -2152 296 308 129 36 chr20 36583250 36583562 -35570320 - L2 LINE L2 -184 3088 2752 279 143 16 79 chr20 36583679 36583742 -35570140 - MIR3 SINE MIR -6 202 144 1328 120 0 5 chr20 36583828 36584012 -35569870 + AluSx SINE Alu 1 183 -129 198 288 48 110 chr20 36584160 36584306 -35569576 - MIR SINE MIR -56 206 70 202 358 92 8 chr20 36584362 36584482 -35569400 + L2 LINE L2 3141 3270 -2 2256 112 0 3 chr20 36584674 36584969 -35568913 + AluSg SINE Alu 1 294 -16 3206 187 56 0 chr20 36584971 36585164 -35568718 - L1MD2 LINE L1 -16 6343 6162 189 0 0 0 chr20 36585164 36585185 -35568697 + (TG)n Simple_repeat Simple_repeat 2 22 0 3206 187 56 0 chr20 36585185 36585602 -35568280 - L1MD2 LINE L1 -197 6162 5699 191 333 0 23 chr20 36585652 36585739 -35568143 + MIR SINE MIR 151 235 -27 2477 106 14 25 chr20 36585853 36586221 -35567661 - THE1B LTR MaLR 0 364 1 412 221 58 0 chr20 36586253 36586339 -35567543 - MIR SINE MIR -123 139 49 303 296 11 0 chr20 36586355 36586443 -35567439 - L2 LINE L2 -557 2757 2669 267 254 30 0 chr20 36586728 36586795 -35567087 - MIR3 SINE MIR -51 157 89 335 167 0 0 chr20 36586807 36586861 -35567021 - L1MD2 LINE L1 -2244 5541 5488 1383 166 64 0 chr20 36586916 36587030 -35566852 - AluJo SINE Alu -62 250 145 201 39 0 0 chr20 36587030 36587056 -35566826 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1383 166 64 0 chr20 36587056 36587176 -35566706 - AluJo SINE Alu -167 145 1 950 134 0 22 chr20 36587216 36587395 -35566487 + (TTCCC)n Simple_repeat Simple_repeat 2 176 0 272 194 42 14 chr20 36587395 36587467 -35566415 + CT-rich Low_complexity Low_complexity 2 75 0 2023 110 4 4 chr20 36587480 36587753 -35566129 - AluSx SINE Alu -39 273 1 2540 63 0 7 chr20 36588780 36589082 -35564800 - AluY SINE Alu -11 300 1 260 302 140 11 chr20 36589171 36589469 -35564413 - L1M4 LINE L1 -2237 3909 3573 1818 184 13 3 chr20 36589584 36589893 -35563989 + AluJb SINE Alu 1 312 0 1820 88 13 0 chr20 36589935 36590188 -35563694 + AluSq SINE Alu 55 310 0 1739 103 4 4 chr20 36590701 36590934 -35562948 - AluSg/x SINE Alu -11 299 67 2116 99 0 18 chr20 36590934 36591217 -35562665 - AluY SINE Alu -33 278 1 2238 117 0 0 chr20 36591232 36591523 -35562359 - AluSc SINE Alu -18 291 1 185 333 67 0 chr20 36591574 36591634 -35562248 + L2 LINE L2 3142 3205 -67 2076 133 17 0 chr20 36591706 36592000 -35561882 - AluSx SINE Alu -13 299 1 315 250 40 0 chr20 36592026 36592102 -35561780 - MIR3 SINE MIR -48 160 82 2035 156 43 54 chr20 36593315 36593757 -35560125 + LTR36 LTR ERV1 1 437 -174 1725 101 0 9 chr20 36593762 36593990 -35559892 - AluSg/x SINE Alu -2 308 83 287 224 15 15 chr20 36593990 36594057 -35559825 + LTR36 LTR ERV1 545 611 0 180 0 0 0 chr20 36594067 36594087 -35559795 + (A)n Simple_repeat Simple_repeat 1 20 0 2076 139 3 0 chr20 36594093 36594387 -35559495 + AluSx SINE Alu 1 295 -17 776 176 139 12 chr20 36594397 36594562 -35559320 - MER66B LTR ERV1 -3 483 298 291 77 0 0 chr20 36594611 36594650 -35559232 + U2 snRNA snRNA 1 39 -149 421 193 68 85 chr20 36594654 36594830 -35559052 - MER66B LTR ERV1 -217 269 97 235 284 167 0 chr20 36594910 36595012 -35558870 + MIR SINE MIR 87 205 -57 913 246 62 25 chr20 36595634 36595878 -35558004 + MIR SINE MIR 10 262 0 317 349 56 16 chr20 36596186 36596438 -35557444 - L1MC/D LINE L1 -2008 5800 5539 831 155 8 0 chr20 36596535 36596664 -35557218 + AluJb SINE Alu 5 134 -178 349 294 5 22 chr20 36596711 36596895 -35556987 - L1MC/D LINE L1 -797 5349 5169 2156 136 0 3 chr20 36596907 36597215 -35556667 - AluSx SINE Alu 0 312 6 189 0 0 0 chr20 36597220 36597241 -35556641 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1147 142 0 0 chr20 36597243 36597405 -35556477 - FRAM SINE Alu -17 159 1 2816 23 0 0 chr20 36597459 36597769 -35556113 - AluYa5 SINE Alu -1 310 1 502 292 51 39 chr20 36597821 36597967 -35555915 - L1MC4 LINE L1 -198 7844 7701 2166 96 0 0 chr20 36597967 36598238 -35555644 - AluSx SINE Alu -41 271 1 502 292 51 39 chr20 36598238 36598423 -35555459 - L1MC4 LINE L1 -341 7701 7509 1025 190 112 14 chr20 36598505 36598776 -35555106 - MLT1D LTR MaLR 0 505 227 490 203 110 0 chr20 36598869 36598987 -35554895 + MER63 DNA MER1_type 4 760 -76 195 125 188 21 chr20 36599046 36599094 -35554788 - L3 LINE CR1 -755 822 767 188 333 32 32 chr20 36599596 36599689 -35554193 + L2 LINE L2 1162 1254 -2060 2513 61 3 0 chr20 36599935 36600231 -35553651 - AluY SINE Alu -14 297 1 423 264 97 28 chr20 36601284 36601487 -35552395 + MIR SINE MIR 27 256 -6 2885 13 0 0 chr20 36601490 36601823 -35552059 - AluY SINE Alu 0 333 1 2699 30 0 0 chr20 36601825 36602122 -35551760 - AluY SINE Alu -14 297 1 397 244 231 6 chr20 36602573 36602733 -35551149 + MIR3 SINE MIR 10 205 -3 846 144 0 0 chr20 36603001 36603119 -35550763 + FRAM SINE Alu 36 153 -23 21 57 0 0 chr20 36603242 36603277 -35550605 + AT_rich Low_complexity Low_complexity 1 35 0 336 200 0 0 chr20 36603821 36603881 -35550001 - FLAM_A SINE Alu -73 60 1 1617 184 3 31 chr20 36603910 36604198 -35549684 + AluJb SINE Alu 1 280 -32 864 129 32 0 chr20 36604241 36604396 -35549486 + L1MB8 LINE L1 6007 6166 -12 1826 160 0 57 chr20 36604697 36604867 -35549015 - AluJb SINE Alu -11 301 156 2416 80 0 0 chr20 36604867 36605166 -35548716 - AluY SINE Alu -12 299 1 1826 160 0 57 chr20 36605166 36605313 -35548569 - AluJb SINE Alu -156 156 2 195 250 62 12 chr20 36605608 36605688 -35548194 - L2 LINE L2 -410 2904 2821 510 188 16 62 chr20 36605860 36605954 -35547928 - MSTC LTR MaLR -238 158 78 910 144 0 0 chr20 36605954 36606079 -35547803 - FLAM_C SINE Alu -7 126 2 510 188 16 62 chr20 36606079 36606154 -35547728 - MSTC LTR MaLR -318 78 1 538 327 58 23 chr20 36606155 36606415 -35547467 - L2 LINE L2 -217 3096 2828 409 232 143 0 chr20 36606747 36606859 -35547023 + MIR SINE MIR 116 243 -19 515 292 0 26 chr20 36607339 36607493 -35546389 - MIR3 SINE MIR -1 207 58 261 336 70 7 chr20 36607688 36607831 -35546051 + MIR3 SINE MIR 43 194 -14 1699 195 3 13 chr20 36607949 36608262 -35545620 - AluJb SINE Alu -2 310 1 328 245 129 14 chr20 36608442 36608581 -35545301 - L2 LINE L2 -183 3089 2935 202 149 0 43 chr20 36608658 36608705 -35545177 + (GGA)n Simple_repeat Simple_repeat 1 45 0 335 290 130 30 chr20 36608969 36609169 -35544713 + L2 LINE L2 2893 3112 -160 1145 200 51 0 chr20 36609250 36609445 -35544437 - AluJb SINE Alu -17 295 91 503 154 0 0 chr20 36609445 36609523 -35544359 + AluJo SINE Alu 70 147 -165 193 161 0 0 chr20 36609527 36609558 -35544324 + L2 LINE L2 3008 3038 -275 847 128 8 0 chr20 36609589 36609706 -35544176 + AluJo/FLAM SINE Alu 1 118 -184 607 107 0 12 chr20 36609706 36609790 -35544092 - AluJb SINE Alu -228 84 2 426 298 53 8 chr20 36610032 36610163 -35543719 - MIR SINE MIR -113 149 13 272 293 172 9 chr20 36610205 36610321 -35543561 - L2 LINE L2 0 3313 3179 287 191 9 130 chr20 36611394 36611509 -35542373 + L2 LINE L2 2943 3043 -229 1707 152 3 25 chr20 36611533 36611816 -35542066 + AluJo SINE Alu 1 277 -35 972 192 12 0 chr20 36611816 36611988 -35541894 - AluJo SINE Alu -138 174 1 2035 127 0 7 chr20 36612010 36612310 -35541572 - AluSx SINE Alu -14 298 1 320 362 17 40 chr20 36612314 36612488 -35541394 + L2 LINE L2 3103 3272 0 597 333 27 0 chr20 36612886 36613072 -35540810 + MIR SINE MIR 51 241 -21 2002 105 0 7 chr20 36614378 36614692 -35539190 - AluSq SINE Alu 0 312 1 1847 144 0 27 chr20 36614694 36614993 -35538889 - AluSx SINE Alu -21 291 1 550 150 0 45 chr20 36615130 36615236 -35538646 - MER31A LTR ERV1 -37 444 340 364 371 77 15 chr20 36615236 36615508 -35538374 - L1MC/D LINE L1 -2213 5595 5307 865 223 57 14 chr20 36615529 36615740 -35538142 - MIR SINE MIR -12 250 31 256 340 42 91 chr20 36615809 36616074 -35537808 - L2 LINE L2 -13 3259 3008 642 185 85 0 chr20 36616112 36616242 -35537640 - MER63D DNA MER1_type -2 1060 920 690 234 0 0 chr20 36616248 36616376 -35537506 + FLAM_A SINE Alu 1 128 -5 267 31 0 0 chr20 36616381 36616413 -35537469 + (GA)n Simple_repeat Simple_repeat 1 32 0 259 133 17 17 chr20 36616434 36616494 -35537388 + GA-rich Low_complexity Low_complexity 1 60 0 2049 199 90 107 chr20 36616496 36616873 -35537009 - MER63D DNA MER1_type -139 922 540 2083 124 10 0 chr20 36616873 36617180 -35536702 + AluSx SINE Alu 3 312 0 2049 199 90 107 chr20 36617180 36617191 -35536691 - MER63D DNA MER1_type -521 540 530 2032 112 34 10 chr20 36617191 36617487 -35536395 + AluSx SINE Alu 1 303 -9 2049 199 90 107 chr20 36617487 36617899 -35535983 - MER63D DNA MER1_type -531 530 4 247 242 121 22 chr20 36618215 36618306 -35535576 + MIR SINE MIR 103 202 -60 909 179 5 65 chr20 36618335 36618393 -35535489 + MER5A DNA MER1_type 1 61 -128 2349 91 0 0 chr20 36618393 36618702 -35535180 - AluSq SINE Alu -3 310 2 909 179 5 65 chr20 36618702 36618844 -35535038 + MER5A DNA MER1_type 61 189 0 398 250 128 18 chr20 36618906 36619070 -35534812 - MER5A DNA MER1_type -1 188 7 385 238 127 16 chr20 36619115 36619241 -35534641 + Charlie8 DNA MER1_type 37 176 -2241 1244 237 4 0 chr20 36619690 36619968 -35533914 - L1ME3 LINE L1 -24 6138 5860 338 290 67 27 chr20 36619981 36620281 -35533601 + L1ME4a LINE L1 5771 6082 -39 272 213 0 0 chr20 36620277 36620338 -35533544 - L1MC4 LINE L1 0 8042 7982 * 320 119 0 0 chr20 36620339 36620381 -35533501 - AluSp SINE Alu -130 173 132 1908 104 0 84 chr20 36620390 36620569 -35533313 - AluSp SINE Alu -6 307 115 211 28 56 0 chr20 36620569 36620605 -35533277 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2108 81 4 0 chr20 36620605 36620876 -35533006 - AluSp SINE Alu -30 283 12 1908 104 0 84 chr20 36620876 36621030 -35532852 - AluSp SINE Alu -196 117 1 204 40 0 0 chr20 36621097 36621122 -35532760 + (A)n Simple_repeat Simple_repeat 1 25 0 2274 100 0 0 chr20 36621128 36621428 -35532454 + AluSx SINE Alu 1 300 -12 24 0 0 0 chr20 36621957 36621981 -35531901 + AT_rich Low_complexity Low_complexity 1 24 0 2031 136 8 20 chr20 36621986 36622339 -35531543 - L1MB7 LINE L1 -222 5962 5614 1297 134 16 0 chr20 36622339 36622533 -35531349 - MSTC LTR MaLR 0 428 232 300 298 228 9 chr20 36622720 36622834 -35531048 + L2 LINE L2 3134 3272 0 390 317 96 43 chr20 36622931 36623024 -35530858 - MIR SINE MIR 0 262 175 2161 118 0 0 chr20 36623024 36623329 -35530553 - AluSx SINE Alu -7 305 1 390 317 96 43 chr20 36623329 36623465 -35530417 - MIR SINE MIR -87 175 21 265 266 123 8 chr20 36623872 36623996 -35529886 + MIR SINE MIR 2 138 -70 721 291 40 20 chr20 36624003 36624254 -35529628 + MIR SINE MIR 7 262 0 3184 217 59 39 chr20 36624383 36624551 -35529331 - L1MEc LINE L1 -838 1738 1575 2215 106 3 0 chr20 36624551 36624862 -35529020 - AluSx SINE Alu 0 312 1 3184 217 59 39 chr20 36624862 36625113 -35528769 - L1MEc LINE L1 -1001 1575 1330 2238 91 0 13 chr20 36625113 36625422 -35528460 + AluSx SINE Alu 6 310 -2 3184 217 59 39 chr20 36625422 36626198 -35527684 - L1MEc LINE L1 -1246 1330 1880 2259 96 0 3 chr20 36626198 36626500 -35527382 - AluSq SINE Alu -12 301 1 3184 217 59 39 chr20 36626500 36626859 -35527023 - L1MEc LINE L1 -695 1881 1531 1056 158 0 6 chr20 36626889 36627076 -35526806 - AluSc SINE Alu 0 306 121 1804 110 3 125 chr20 36627093 36627275 -35526607 - AluSq SINE Alu -15 288 161 7098 46 11 29 chr20 36627275 36628841 -35525041 - SVA Other Other -799 1383 1 1804 110 3 125 chr20 36628841 36628985 -35524897 - AluSq SINE Alu -142 161 1 2737 230 63 49 chr20 36629032 36630054 -35523828 - L1MEc LINE L1 -4906 1490 455 763 189 8 0 chr20 36630055 36630182 -35523700 - MLT1F LTR MaLR -16 551 424 643 158 0 0 chr20 36630183 36630284 -35523598 + FLAM_A SINE Alu 30 130 -12 951 247 169 31 chr20 36630284 36630640 -35523242 - MLT1F LTR MaLR -136 406 2 1697 225 25 55 chr20 36630641 36630966 -35522916 - L1MEc LINE L1 -5936 460 150 1833 127 18 3 chr20 36630966 36631249 -35522633 - AluJo SINE Alu -17 295 9 1697 225 25 55 chr20 36631249 36631359 -35522523 - L1MEc LINE L1 -6246 150 38 2178 142 24 6 chr20 36631566 36631897 -35521985 - MER1B DNA MER1_type 0 337 1 2233 89 0 19 chr20 36632063 36632378 -35521504 + AluY SINE Alu 1 309 -2 2229 96 0 3 chr20 36632502 36632804 -35521078 - AluSg SINE Alu -9 301 1 365 246 6 54 chr20 36632813 36632830 -35521052 - L1MA10 LINE L1 -1 6333 6317 999 197 101 82 chr20 36632830 36632903 -35520979 - L1ME2 LINE L1 -10 6154 6084 1826 151 3 7 chr20 36632903 36633194 -35520688 - AluJb SINE Alu -22 290 1 999 197 101 82 chr20 36633194 36633384 -35520498 - L1ME2 LINE L1 -80 6084 5879 2093 99 3 0 chr20 36633384 36633696 -35520186 + AluY SINE Alu 1 313 0 999 197 101 82 chr20 36633696 36633785 -35520097 - L1ME2 LINE L1 -285 5879 5793 732 185 7 22 chr20 36633789 36633924 -35519958 - FLAM_A SINE Alu 0 133 1 276 309 10 31 chr20 36633939 36634009 -35519873 - MIR SINE MIR -5 257 188 1371 228 14 0 chr20 36634009 36634298 -35519584 - AluJb SINE Alu -19 293 1 276 309 10 31 chr20 36634298 36634324 -35519558 - MIR SINE MIR -74 188 163 187 264 75 0 chr20 36634459 36634512 -35519370 + MIR SINE MIR 41 97 -111 326 242 195 20 chr20 36635109 36635258 -35518624 + MIR3 SINE MIR 30 204 -4 353 220 202 69 chr20 36635317 36635490 -35518392 + MIR SINE MIR 2 197 -65 886 178 0 26 chr20 36635525 36635677 -35518205 + AluJb SINE Alu 135 282 -30 2337 70 0 7 chr20 36635681 36635979 -35517903 - AluY SINE Alu -15 296 1 3429 169 24 40 chr20 36635979 36636439 -35517443 - L1MC3 LINE L1 -1174 6611 6166 2236 99 0 0 chr20 36636439 36636742 -35517140 - AluY SINE Alu -8 303 1 3429 169 24 40 chr20 36636742 36637025 -35516857 - L1MC3 LINE L1 -1619 6166 5880 2080 77 63 0 chr20 36637035 36637321 -35516561 - AluSp SINE Alu -9 304 1 1767 114 3 65 chr20 36637388 36637560 -35516322 - AluSq SINE Alu -17 296 148 2063 116 0 3 chr20 36637560 36637862 -35516020 - AluSq SINE Alu -12 301 1 1767 114 3 65 chr20 36637862 36637979 -35515903 - AluSq SINE Alu -165 148 25 1256 203 32 32 chr20 36637989 36638300 -35515582 - L1M4 LINE L1 -1763 4383 4073 1347 83 0 0 chr20 36638305 36638474 -35515408 - AluSg SINE Alu -141 169 1 205 278 86 62 chr20 36638927 36639089 -35514793 + L3 LINE CR1 1218 1383 -194 1890 136 30 0 chr20 36639089 36639390 -35514492 - AluSx SINE Alu -2 310 1 698 93 0 0 chr20 36639404 36639501 -35514381 - AluSp/q SINE Alu 0 313 217 702 240 34 29 chr20 36639854 36640029 -35513853 + MIR SINE MIR 44 219 -43 1379 104 0 5 chr20 36640032 36640225 -35513657 - AluSc SINE Alu -15 294 103 2083 117 7 3 chr20 36640339 36640648 -35513234 - AluSg SINE Alu 0 310 1 1825 148 0 13 chr20 36640650 36640953 -35512929 - AluJo SINE Alu -13 299 1 1989 158 0 9 chr20 36640953 36641481 -35512401 - L1M2 LINE L1 -707 5584 5061 * 2854 174 103 90 chr20 36641480 36641870 -35512012 + L1MC3 LINE L1 6716 7100 -685 249 307 45 0 chr20 36641870 36641958 -35511924 + MLT1F1 LTR MaLR 35 126 -441 2854 174 103 90 chr20 36641958 36642521 -35511361 + L1MC3 LINE L1 7100 7769 -16 2215 104 3 0 chr20 36642527 36642825 -35511057 + AluSx SINE Alu 1 299 -13 1329 197 0 0 chr20 36642863 36643097 -35510785 + AluJb SINE Alu 68 301 -11 272 290 100 46 chr20 36643534 36643793 -35510089 - L3 LINE CR1 -170 1407 1135 808 118 24 8 chr20 36644001 36644128 -35509754 - L1MC3 LINE L1 -21 7764 7636 189 306 82 0 chr20 36644142 36644191 -35509691 - L3 LINE CR1 -451 1126 1074 216 197 164 16 chr20 36644410 36644471 -35509411 + L2 LINE L2 3238 3307 -6 294 312 55 28 chr20 36644829 36644938 -35508944 + MIR3 SINE MIR 54 165 -43 969 280 94 45 chr20 36644970 36645263 -35508619 - L2 LINE L2 -2 3311 3034 2055 117 13 0 chr20 36645263 36645571 -35508311 + AluJb SINE Alu 1 312 0 969 280 94 45 chr20 36645571 36645837 -35508045 - L2 LINE L2 -279 3034 2721 405 159 76 91 chr20 36645874 36646006 -35507876 + MIR SINE MIR 9 138 -70 * 857 283 16 12 chr20 36646004 36646090 -35507792 + MIR SINE MIR 12 96 -166 2392 77 3 0 chr20 36646090 36646400 -35507482 - AluY SINE Alu 0 311 1 857 283 16 12 chr20 36646400 36646557 -35507325 + MIR SINE MIR 96 256 -6 234 307 149 0 chr20 36646596 36646710 -35507172 + MIR SINE MIR 74 204 -58 1995 119 10 0 chr20 36647157 36647450 -35506432 + L1MA4 LINE L1 5725 6020 -280 336 188 35 0 chr20 36647450 36647535 -35506347 + L1MB3 LINE L1 6087 6174 -9 264 221 29 15 chr20 36647705 36647773 -35506109 + MIR3 SINE MIR 4 72 -136 1934 123 0 52 chr20 36648021 36648207 -35505675 - AluSx SINE Alu -5 307 144 2258 103 0 3 chr20 36648207 36648517 -35505365 - AluSc SINE Alu 0 309 1 1934 123 0 52 chr20 36648517 36648654 -35505228 - AluSx SINE Alu -168 144 1 1776 135 39 0 chr20 36648656 36648937 -35504945 - AluJb SINE Alu -18 294 3 235 0 57 0 chr20 36648994 36649029 -35504853 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 2163 81 44 3 chr20 36649262 36649559 -35504323 + AluSp SINE Alu 1 309 -4 228 340 121 0 chr20 36649867 36650073 -35503809 + L1ME4a LINE L1 5477 5707 -414 1997 132 3 0 chr20 36650073 36650360 -35503522 + AluSx SINE Alu 1 288 -24 2007 129 0 0 chr20 36650366 36650652 -35503230 + AluSx SINE Alu 1 286 -26 1879 126 9 25 chr20 36650666 36650983 -35502899 + AluSq SINE Alu 1 312 -1 341 304 90 51 chr20 36650984 36651319 -35502563 + L1ME4a LINE L1 5692 6039 -82 1318 186 58 15 chr20 36651342 36651616 -35502266 - AluJo SINE Alu 0 312 27 25 0 0 0 chr20 36651619 36651644 -35502238 + AT_rich Low_complexity Low_complexity 1 25 0 311 225 28 0 chr20 36651665 36651736 -35502146 + L1ME4a LINE L1 6047 6119 -2 276 153 64 153 chr20 36651775 36651977 -35501905 - Charlie7 DNA MER1_type 0 2612 2429 1714 132 14 11 chr20 36652071 36652352 -35501530 - AluJb SINE Alu -30 282 1 600 309 97 64 chr20 36652378 36653014 -35500868 + L2 LINE L2 2607 3265 -7 255 276 103 0 chr20 36653022 36653138 -35500744 - L1ME4a LINE L1 -26 6095 5968 197 258 10 124 chr20 36653382 36653479 -35500403 + MIR3 SINE MIR 87 172 -36 2063 97 35 0 chr20 36653697 36653985 -35499897 - AluSx SINE Alu -14 298 1 277 246 16 0 chr20 36654182 36654243 -35499639 + L2 LINE L2 3206 3267 -5 181 390 0 0 chr20 36654389 36654471 -35499411 - MIR3 SINE MIR -14 194 113 779 263 96 47 chr20 36654573 36654705 -35499177 + L1MEd LINE L1 103 227 -5892 1943 128 3 0 chr20 36654705 36654994 -35498888 - AluSx SINE Alu -22 290 1 779 263 96 47 chr20 36654994 36655245 -35498637 + L1MEd LINE L1 227 505 -5614 265 242 77 11 chr20 36655284 36655375 -35498507 + MIR SINE MIR 166 262 0 883 267 24 24 chr20 36655425 36655635 -35498247 + MER63A DNA MER1_type 1 210 0 452 227 0 0 chr20 36655929 36656017 -35497865 - L1MB8 LINE L1 -189 5989 5902 817 201 6 18 chr20 36656039 36656208 -35497674 - MER33 DNA MER1_type -157 167 1 701 255 32 81 chr20 36656989 36657299 -35496583 - MER102a DNA MER1_type -15 315 21 360 339 31 0 chr20 36657744 36657871 -35496011 + MIR3 SINE MIR 30 160 -48 1771 136 11 18 chr20 36657941 36658227 -35495655 - AluJo SINE Alu -15 297 14 2500 108 27 11 chr20 36658227 36658596 -35495286 + THE1C LTR MaLR 1 375 0 216 0 0 0 chr20 36658933 36658957 -35494925 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1504 158 21 49 chr20 36658964 36659248 -35494634 - AluSx SINE Alu -36 276 1 1677 170 0 47 chr20 36659354 36659672 -35494210 - AluJo SINE Alu -9 303 1 2451 62 3 0 chr20 36659878 36660183 -35493699 + AluY SINE Alu 1 306 -5 312 172 0 0 chr20 36661027 36661085 -35492797 + (CA)n Simple_repeat Simple_repeat 1 58 0 324 229 43 0 chr20 36661085 36661155 -35492727 - L1MCa LINE L1 -4358 2068 1996 * 356 136 0 15 chr20 36661140 36661206 -35492676 + (CA)n Simple_repeat Simple_repeat 2 66 0 1817 148 69 7 chr20 36661239 36661530 -35492352 + AluJo SINE Alu 3 311 -1 255 302 145 28 chr20 36661752 36661931 -35491951 - MIR SINE MIR -16 246 47 2312 87 3 13 chr20 36662325 36662634 -35491248 + AluSg SINE Alu 5 310 0 2556 78 3 0 chr20 36663244 36663552 -35490330 + AluSp SINE Alu 1 309 -4 685 270 39 7 chr20 36663555 36663609 -35490273 + L1MC4 LINE L1 7701 7752 -290 1847 166 16 13 chr20 36663609 36663917 -35489965 - AluJb SINE Alu -3 309 1 685 270 39 7 chr20 36663917 36664147 -35489735 + L1MC4 LINE L1 7752 7994 -48 534 126 0 35 chr20 36664154 36664241 -35489641 - FLAM_A SINE Alu -17 125 42 2323 107 7 0 chr20 36664241 36664549 -35489333 - AluSq SINE Alu -3 310 1 3726 136 14 8 chr20 36664632 36665257 -35488625 - L1MB3 LINE L1 -4 6179 5551 1887 139 35 3 chr20 36665401 36665688 -35488194 + AluJb SINE Alu 1 296 -16 2522 74 0 0 chr20 36665757 36666066 -35487816 + AluY SINE Alu 1 309 -2 4850 153 49 9 chr20 36666151 36667001 -35486881 + L1MC1 LINE L1 5450 6333 0 1568 101 5 18 chr20 36667034 36667251 -35486631 + AluSq SINE Alu 91 304 -9 925 271 281 14 chr20 36667535 36668253 -35485629 - L2 LINE L2 -50 3263 2339 2143 95 7 21 chr20 36668307 36668592 -35485290 + AluSq SINE Alu 1 281 -32 243 0 0 0 chr20 36668593 36668620 -35485262 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1132 141 40 5 chr20 36668731 36668770 -35485112 - L1M3 LINE L1 -488 5683 5647 1005 208 127 5 chr20 36668770 36668982 -35484900 - MER8 DNA MER2_type 0 239 2 1132 141 40 5 chr20 36668982 36669141 -35484741 - L1M3 LINE L1 -524 5647 5478 528 155 31 93 chr20 36669142 36669155 -35484727 - FLAM_A SINE Alu -171 140 128 2394 113 0 0 chr20 36669155 36669466 -35484416 - AluSx SINE Alu -1 311 1 528 155 31 93 chr20 36669466 36669581 -35484301 - FLAM_A SINE Alu -183 128 20 1504 161 10 26 chr20 36669582 36669886 -35483996 - L1MC4 LINE L1 -961 7081 6783 375 219 118 8 chr20 36669959 36670078 -35483804 - MIR SINE MIR -56 152 21 268 213 21 0 chr20 36670855 36670902 -35482980 - L2 LINE L2 -8 3264 3217 1711 94 133 12 chr20 36671033 36671289 -35482593 + AluSg1 SINE Alu 1 287 -22 355 257 92 44 chr20 36671340 36671546 -35482336 - L2 LINE L2 -220 3052 2837 15022 156 66 44 chr20 36672264 36673030 -35480852 + MER109 Unknown Unknown 1 749 -1683 2353 90 0 0 chr20 36673030 36673319 -35480563 - AluSc SINE Alu -20 289 1 15022 156 66 44 chr20 36673319 36676977 -35476905 + MER109 Unknown Unknown 749 2432 0 858 269 151 38 chr20 36677253 36677670 -35476212 - L2 LINE L2 0 3313 2850 2998 214 69 6 chr20 36677690 36678386 -35475496 - L2 LINE L2 -648 2666 1927 2292 93 0 7 chr20 36678468 36678768 -35475114 - AluSg SINE Alu -12 298 1 2309 112 0 3 chr20 36678782 36679095 -35474787 - AluSx SINE Alu 0 312 1 2095 141 0 20 chr20 36679099 36679423 -35474459 - AluSx SINE Alu 0 312 1 2128 137 10 0 chr20 36679918 36680224 -35473658 - AluSg SINE Alu 0 310 2 1426 279 58 44 chr20 36680225 36680371 -35473511 + L2 LINE L2 2282 2424 -848 2512 103 14 3 chr20 36680371 36680722 -35473160 + THE1A LTR MaLR 1 355 0 1426 279 58 44 chr20 36680722 36680829 -35473053 + L2 LINE L2 2424 2528 -744 963 204 24 33 chr20 36680829 36681040 -35472842 - MER3 DNA MER1_type 0 209 1 1426 279 58 44 chr20 36681040 36681318 -35472564 + L2 LINE L2 2528 2833 -439 1650 152 50 36 chr20 36681318 36681371 -35472511 - AluJb SINE Alu -5 307 256 198 0 0 0 chr20 36681371 36681393 -35472489 + (CAGTG)n Simple_repeat Simple_repeat 1 22 0 1650 152 50 36 chr20 36681393 36681642 -35472240 - AluJb SINE Alu -56 256 1 1426 279 58 44 chr20 36681642 36681873 -35472009 + L2 LINE L2 2833 3059 -213 221 221 15 73 chr20 36681958 36682026 -35471856 - MIR SINE MIR 0 262 199 2179 131 0 0 chr20 36682036 36682334 -35471548 - AluSx SINE Alu -14 298 1 23 0 0 0 chr20 36682343 36682366 -35471516 + AT_rich Low_complexity Low_complexity 1 23 0 1626 155 3 59 chr20 36682366 36682669 -35471213 - AluJo SINE Alu -26 286 1 302 230 92 35 chr20 36682691 36682778 -35471104 + L2 LINE L2 3222 3313 0 * 645 239 8 0 chr20 36682776 36682910 -35470972 - MIR SINE MIR -13 249 115 1896 138 3 34 chr20 36683186 36683322 -35470560 + AluSx SINE Alu 1 140 -163 2217 113 10 10 chr20 36683322 36683633 -35470249 + AluSx SINE Alu 1 311 -1 1896 138 3 34 chr20 36683633 36683808 -35470074 + AluSx SINE Alu 140 303 0 662 95 0 0 chr20 36683809 36683893 -35469989 + AluS SINE Alu 2 85 -228 2593 65 0 0 chr20 36684063 36684370 -35469512 - AluY SINE Alu -4 307 1 870 176 0 0 chr20 36684489 36684637 -35469245 - MLT1A1 LTR MaLR 0 365 218 1673 91 0 0 chr20 36684643 36684851 -35469031 - AluSg/x SINE Alu 0 312 105 2433 96 3 0 chr20 36684861 36685173 -35468709 - AluSq SINE Alu 0 313 1 882 128 19 39 chr20 36685174 36685330 -35468552 - MLT1A1 LTR MaLR -212 153 1 2103 161 180 127 chr20 36685572 36685611 -35468271 + L1MC3 LINE L1 6881 6917 -868 2358 94 3 0 chr20 36685611 36685908 -35467974 + AluSx SINE Alu 3 300 -12 2103 161 180 127 chr20 36685908 36686037 -35467845 + L1MC3 LINE L1 6917 7038 -747 2226 85 7 3 chr20 36686037 36686360 -35467522 + AluSp SINE Alu 1 324 0 2103 161 180 127 chr20 36686360 36686419 -35467463 + L1MC3 LINE L1 7038 7092 -693 388 171 49 0 chr20 36686419 36686501 -35467381 + MLT1F1 LTR MaLR 45 130 -437 2103 161 180 127 chr20 36686501 36686991 -35466891 + L1MC3 LINE L1 7092 7724 -61 1079 206 113 28 chr20 36687034 36687325 -35466557 + MLT2D LTR ERVL 92 407 -7 248 124 0 124 chr20 36687328 36687417 -35466465 + L1MC3 LINE L1 7707 7784 -1 2387 108 0 13 chr20 36687424 36687740 -35466142 + AluSx SINE Alu 1 312 0 1764 230 71 21 chr20 36687774 36688253 -35465629 - MLT1D LTR MaLR -2 503 1 3021 150 25 4 chr20 36688391 36688863 -35465019 + MER66B LTR ERV1 1 482 -4 245 312 149 13 chr20 36688893 36689047 -35464835 + MIR SINE MIR 11 185 -77 196 339 74 0 chr20 36689138 36689256 -35464626 - MIR SINE MIR -55 153 77 2262 116 3 3 chr20 36689353 36689655 -35464227 - AluSq SINE Alu -11 302 1 226 220 0 0 chr20 36689672 36689722 -35464160 + Charlie8 DNA MER1_type 1368 1417 -1000 617 291 44 5 chr20 36690108 36690311 -35463571 + MIR SINE MIR 32 242 -20 546 79 0 0 chr20 36691071 36691147 -35462735 + (GCTG)n Simple_repeat Simple_repeat 1 76 0 2150 131 0 31 chr20 36692115 36692436 -35461446 - AluSx SINE Alu -1 311 1 324 0 0 0 chr20 36692464 36692500 -35461382 + (TG)n Simple_repeat Simple_repeat 1 36 0 392 102 68 0 chr20 36692925 36692984 -35460898 - L2 LINE L2 0 3313 3251 820 162 9 134 chr20 36693133 36693208 -35460674 + MER5A DNA MER1_type 1 84 -105 1927 73 0 4 chr20 36693208 36693442 -35460440 + AluY SINE Alu 66 298 -13 820 162 9 134 chr20 36693442 36693582 -35460300 + MER5A DNA MER1_type 84 189 0 491 351 17 0 chr20 36693586 36693760 -35460122 + MIR SINE MIR 13 189 -73 2386 93 10 3 chr20 36693825 36694136 -35459746 - AluSq SINE Alu 0 313 1 2106 125 11 0 chr20 36694210 36694512 -35459370 - AluSx SINE Alu 0 305 1 261 0 0 0 chr20 36694529 36694558 -35459324 + (A)n Simple_repeat Simple_repeat 1 29 0 2263 108 0 3 chr20 36694571 36694868 -35459014 - AluSp SINE Alu -17 296 1 329 306 50 16 chr20 36695252 36695373 -35458509 - MIR3 SINE MIR -2 206 82 1622 159 9 0 chr20 36695488 36695721 -35458161 + AluSx SINE Alu 1 235 -77 330 361 98 37 chr20 36695784 36696028 -35457854 + L2 LINE L2 2829 3087 -185 2223 113 0 20 chr20 36696047 36696349 -35457533 + AluSx SINE Alu 1 296 -16 2412 83 0 0 chr20 36697199 36697489 -35456393 + AluSq SINE Alu 1 290 -23 487 309 23 11 chr20 36697518 36697693 -35456189 + MIR3 SINE MIR 30 206 -2 231 323 18 29 chr20 36697964 36698103 -35455779 + GA-rich Low_complexity Low_complexity 1 140 -360 2139 140 7 0 chr20 36698103 36698410 -35455472 + AluJb SINE Alu 1 309 -3 231 323 18 29 chr20 36698410 36698470 -35455412 + GA-rich Low_complexity Low_complexity 140 500 0 251 281 98 0 chr20 36698764 36698846 -35455036 + L2 LINE L2 3174 3263 -9 2062 138 3 0 chr20 36698858 36699155 -35454727 + AluSx SINE Alu 1 298 -14 1086 118 7 0 chr20 36699592 36699736 -35454146 + AluJo SINE Alu 1 145 -167 2260 123 7 0 chr20 36699736 36700044 -35453838 + AluSp SINE Alu 1 310 -3 185 300 0 33 chr20 36700387 36700447 -35453435 + MIR SINE MIR 91 148 -60 2409 88 0 0 chr20 36700602 36700897 -35452985 - AluSg SINE Alu -15 295 1 531 354 39 24 chr20 36700986 36701240 -35452642 + MIR SINE MIR 5 262 0 288 283 43 0 chr20 36701253 36701345 -35452537 - MIR3 SINE MIR -5 203 108 237 298 135 10 chr20 36701331 36701435 -35452447 - L3b LINE CR1 -193 1390 1274 * 24 53 0 0 chr20 36701748 36701786 -35452096 + AT_rich Low_complexity Low_complexity 1 38 0 803 135 0 0 chr20 36701799 36701910 -35451972 - FLAM_C SINE Alu -32 111 1 254 94 38 0 chr20 36701965 36702018 -35451864 - L1MB4 LINE L1 0 6180 6126 216 184 0 0 chr20 36702041 36702090 -35451792 + CT-rich Low_complexity Low_complexity 3 51 0 213 149 0 43 chr20 36702659 36702706 -35451176 + (GGGGA)n Simple_repeat Simple_repeat 3 47 0 2580 66 0 0 chr20 36702785 36703088 -35450794 - AluY SINE Alu -7 304 2 2311 80 3 0 chr20 36703102 36703388 -35450494 - AluSx SINE Alu -20 292 6 1450 117 4 17 chr20 36703392 36703632 -35450250 - L1MB4 LINE L1 -38 6142 5906 940 164 141 11 chr20 36703634 36703811 -35450071 - AluJb SINE Alu -3 309 110 2805 88 20 2 chr20 36703822 36704220 -35449662 - LTR1 LTR ERV1 -25 760 356 1551 94 0 15 chr20 36704239 36704440 -35449442 + AluSg/x SINE Alu 94 291 -21 2931 143 63 74 chr20 36704440 36704604 -35449278 + L1MB7 LINE L1 5497 5661 -523 2145 107 0 0 chr20 36704604 36704928 -35448954 + AluSx SINE Alu 1 324 0 2536 87 3 0 chr20 36704933 36705243 -35448639 + AluSp SINE Alu 1 311 -2 2931 143 63 74 chr20 36705243 36705264 -35448618 + L1MB7 LINE L1 5665 5685 -499 2116 96 17 46 chr20 36705264 36705566 -35448316 + AluSx SINE Alu 9 301 -11 2931 143 63 74 chr20 36705566 36705902 -35447980 + L1MB7 LINE L1 5685 6020 -164 5336 81 3 25 chr20 36705902 36706457 -35447425 - LTR8 LTR ERV1 0 691 154 2309 114 0 0 chr20 36706457 36706756 -35447126 + AluSx SINE Alu 3 301 -11 5336 81 3 25 chr20 36706756 36706907 -35446975 - LTR8 LTR ERV1 -537 154 1 2931 143 63 74 chr20 36706907 36707055 -35446827 + L1MB7 LINE L1 6020 6168 -16 1782 170 106 0 chr20 36707221 36707551 -35446331 - MLT1A1 LTR MaLR 0 365 1 592 270 77 28 chr20 36707605 36707711 -35446171 - L1ME3A LINE L1 -214 5956 5857 2217 107 3 3 chr20 36707711 36708010 -35445872 - AluSx SINE Alu -11 301 3 592 270 77 28 chr20 36708010 36708266 -35445616 - L1ME3A LINE L1 -313 5857 5576 400 211 119 28 chr20 36708270 36708534 -35445348 - L1ME3A LINE L1 -757 5389 5121 2008 175 105 24 chr20 36708541 36708814 -35445068 + MLT2B1 LTR ERVL 1 327 -193 2057 128 7 7 chr20 36708814 36709104 -35444778 - AluSx SINE Alu -22 290 1 2008 175 105 24 chr20 36709104 36709284 -35444598 + MLT2B1 LTR ERVL 327 491 -29 3427 83 38 21 chr20 36709284 36709742 -35444140 + MER41A LTR ERV1 1 486 -149 2148 80 15 0 chr20 36709742 36710004 -35443878 + AluSx SINE Alu 3 268 -44 3427 83 38 21 chr20 36710004 36710157 -35443725 + MER41A LTR ERV1 486 635 0 284 349 21 0 chr20 36710200 36710392 -35443490 - L1ME3A LINE L1 -1042 5104 4909 1958 159 82 34 chr20 36710406 36710847 -35443035 - MLT1C LTR MaLR 0 467 6 266 277 48 12 chr20 36710964 36711047 -35442835 - MIR SINE MIR -49 213 128 847 278 44 50 chr20 36711050 36711446 -35442436 - MLT1I LTR MaLR 0 409 44 346 232 61 0 chr20 36711500 36711582 -35442300 - MIR SINE MIR -147 115 29 236 260 0 0 chr20 36712236 36712286 -35441596 + MIR SINE MIR 102 151 -111 2341 109 0 0 chr20 36712344 36712646 -35441236 + AluSx SINE Alu 2 303 -9 181 189 27 0 chr20 36712783 36712820 -35441062 + MIR SINE MIR 222 259 -3 368 285 67 106 chr20 36713274 36713453 -35440429 - MIR3 SINE MIR -11 197 26 2222 79 7 7 chr20 36713515 36713831 -35440051 - AluSg SINE Alu 0 316 1 200 326 44 15 chr20 36713840 36713975 -35439907 + L2 LINE L2 2596 2734 -580 603 222 44 0 chr20 36714045 36714180 -35439702 - L3 LINE CR1 -109 1468 1328 2256 113 3 10 chr20 36714197 36714506 -35439376 - AluSx SINE Alu -5 307 1 2102 110 41 0 chr20 36714508 36714799 -35439083 - AluSq SINE Alu -10 303 1 827 272 55 149 chr20 36714991 36715227 -35438655 - L3 LINE CR1 -280 1297 1040 2272 94 0 19 chr20 36715227 36715395 -35438487 - AluSq SINE Alu -12 301 140 2190 109 0 45 chr20 36715395 36715708 -35438174 - AluSg SINE Alu -11 299 1 2272 94 0 19 chr20 36715708 36715846 -35438036 - AluSq SINE Alu -173 140 1 827 272 55 149 chr20 36715846 36716119 -35437763 - L3 LINE CR1 -537 1040 883 968 189 40 10 chr20 36716119 36716320 -35437562 - MER3 DNA MER1_type -2 207 1 827 272 55 149 chr20 36716320 36716580 -35437302 - L3 LINE CR1 -694 883 600 2312 119 0 0 chr20 36716800 36717102 -35436780 + AluSx SINE Alu 1 302 -10 557 255 160 5 chr20 36717108 36717308 -35436574 + MIR SINE MIR 31 261 -1 233 281 44 9 chr20 36718617 36718731 -35435151 + (CGGGG)n Simple_repeat Simple_repeat 5 122 0 189 252 15 8 chr20 36719099 36719230 -35434652 + (TG)n Simple_repeat Simple_repeat 2 133 0 231 296 0 35 chr20 36719332 36719447 -35434435 + (CGTG)n Simple_repeat Simple_repeat 3 113 0 342 195 0 0 chr20 36719690 36719767 -35434115 + (TG)n Simple_repeat Simple_repeat 1 77 0 1936 121 0 29 chr20 36720845 36720988 -35432894 - AluSx SINE Alu -40 272 139 2445 99 0 0 chr20 36720988 36721291 -35432591 - AluSq SINE Alu -10 303 1 1936 121 0 29 chr20 36721291 36721427 -35432455 - AluSx SINE Alu -173 139 1 625 203 25 74 chr20 36721732 36721781 -35432101 + MER5A DNA MER1_type 28 78 -111 2152 87 63 0 chr20 36721781 36722067 -35431815 + AluSx SINE Alu 1 304 -8 625 203 25 74 chr20 36722067 36722180 -35431702 + MER5A DNA MER1_type 78 182 -7 745 311 95 42 chr20 36722487 36722866 -35431016 + L2 LINE L2 2874 3272 0 196 300 14 29 chr20 36722864 36722934 -35430948 + MIR3 SINE MIR 132 200 -8 * 233 296 49 12 chr20 36723185 36723266 -35430616 + MIR3 SINE MIR 78 161 -47 631 295 121 5 chr20 36723276 36723500 -35430382 + MIR SINE MIR 12 261 -1 1851 185 96 14 chr20 36724330 36724757 -35429125 - MLT1C LTR MaLR 0 467 6 490 99 28 0 chr20 36724859 36724930 -35428952 + AluSx SINE Alu 2 74 -239 1899 82 0 9 chr20 36724958 36725214 -35428668 + AluSx SINE Alu 55 308 0 267 250 59 83 chr20 36725328 36725488 -35428394 + MIR SINE MIR 60 213 -49 21 0 0 0 chr20 36725504 36725525 -35428357 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr20 36725573 36725593 -35428289 + (CAGCC)n Simple_repeat Simple_repeat 2 21 0 350 298 35 41 chr20 36725660 36725831 -35428051 - MIR3 SINE MIR -19 189 20 218 266 0 38 chr20 36726282 36726361 -35427521 + CT-rich Low_complexity Low_complexity 5 80 0 680 205 131 52 chr20 36726506 36726735 -35427147 - MIR SINE MIR -11 251 5 183 80 0 0 chr20 36727723 36727748 -35426134 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2156 93 15 0 chr20 36727758 36728069 -35425813 + AluSx SINE Alu 13 327 0 189 275 12 38 chr20 36728418 36728498 -35425384 - MIR SINE MIR -115 93 16 373 186 70 0 chr20 36728531 36728617 -35425265 + MIR3 SINE MIR 110 201 -7 316 324 40 91 chr20 36728924 36729329 -35424553 + L2 LINE L2 2881 3264 -8 428 301 56 56 chr20 36729469 36729685 -35424197 + MIR SINE MIR 47 262 0 2580 58 7 7 chr20 36729711 36730021 -35423861 - AluY SINE Alu 0 311 2 284 158 0 35 chr20 36731527 36731584 -35422298 - L2 LINE L2 -1 3312 3258 238 272 44 0 chr20 36732452 36732554 -35421328 + MIR SINE MIR 79 151 -57 477 200 0 11 chr20 36732770 36732860 -35421022 + Charlie5 DNA MER1_type 1 89 -2523 1447 143 102 8 chr20 36732861 36733106 -35420776 - AluSx SINE Alu -44 268 1 211 149 64 0 chr20 36733111 36733158 -35420724 + (TTTAA)n Simple_repeat Simple_repeat 1 50 0 1049 180 60 90 chr20 36733170 36733231 -35420651 + Charlie5 DNA MER1_type 2236 2297 -327 2366 98 0 19 chr20 36733231 36733538 -35420344 - AluSg SINE Alu -9 301 1 1049 180 60 90 chr20 36733538 36733567 -35420315 + Charlie5 DNA MER1_type 2297 2325 -299 2300 95 7 3 chr20 36733567 36733861 -35420021 + AluSx SINE Alu 1 295 -17 1049 180 60 90 chr20 36733861 36733990 -35419892 + Charlie5 DNA MER1_type 2325 2456 -168 1791 162 19 13 chr20 36733990 36734299 -35419583 - AluJo SINE Alu -1 311 1 1049 180 60 90 chr20 36734299 36734412 -35419470 + Charlie5 DNA MER1_type 2456 2560 -64 2059 131 3 0 chr20 36734412 36734715 -35419167 + AluSx SINE Alu 1 304 0 1049 180 60 90 chr20 36734715 36734778 -35419104 + Charlie5 DNA MER1_type 2560 2623 -1 2491 73 0 13 chr20 36734964 36735266 -35418616 - AluY SINE Alu -13 298 1 332 281 152 34 chr20 36735302 36735480 -35418402 + MIR SINE MIR 46 244 -18 270 193 105 0 chr20 36735742 36735799 -35418083 - MIR SINE MIR -65 143 81 206 243 20 169 chr20 36735935 36735955 -35417927 - MIR3 SINE MIR -25 183 162 2544 72 3 0 chr20 36735955 36736260 -35417622 - AluSp SINE Alu -7 306 1 206 243 20 169 chr20 36736260 36736387 -35417495 - MIR3 SINE MIR -46 162 58 205 171 0 0 chr20 36736543 36736578 -35417304 + (CA)n Simple_repeat Simple_repeat 2 36 0 360 0 0 0 chr20 36736642 36736682 -35417200 + (CA)n Simple_repeat Simple_repeat 2 41 0 387 290 0 0 chr20 36736800 36736917 -35416965 + MIR SINE MIR 42 157 -68 361 296 11 0 chr20 36736920 36737052 -35416830 + MIR SINE MIR 4 140 -68 573 246 128 26 chr20 36737083 36737278 -35416604 - MIR SINE MIR -38 224 10 2543 89 0 3 chr20 36737523 36737836 -35416046 + AluSx SINE Alu 1 312 0 238 284 0 15 chr20 36737843 36737910 -35415972 - MIR3 SINE MIR -41 167 102 547 308 23 9 chr20 36737959 36738180 -35415702 + L2 LINE L2 2466 2689 -625 435 83 0 0 chr20 36739428 36739488 -35414394 + (TG)n Simple_repeat Simple_repeat 1 60 0 244 253 0 36 chr20 36740561 36740644 -35413238 - MLT1K LTR MaLR -3 585 506 384 208 0 62 chr20 36740822 36740918 -35412964 - MLT1K LTR MaLR -382 206 117 735 244 73 39 chr20 36741061 36741295 -35412587 - MIR SINE MIR 0 262 21 394 257 86 7 chr20 36741328 36741468 -35412414 - L3 LINE CR1 -96 1481 1331 473 220 124 133 chr20 36741548 36741631 -35412251 - MIR SINE MIR -1 261 179 2141 124 7 0 chr20 36741631 36741914 -35411968 + AluSx SINE Alu 3 287 -25 473 220 124 133 chr20 36741914 36742071 -35411811 - MIR SINE MIR -83 179 23 234 246 31 0 chr20 36742964 36743029 -35410853 - MIR SINE MIR -96 166 100 491 250 32 60 chr20 36743534 36743749 -35410133 - MIR SINE MIR -43 219 13 1123 99 0 43 chr20 36744234 36744395 -35409487 + AluSg/x SINE Alu 146 299 -13 464 164 98 33 chr20 36744569 36744691 -35409191 + L1MB7 LINE L1 6055 6184 0 216 204 0 0 chr20 36744732 36744776 -35409106 + L2 LINE L2 3270 3313 0 26 30 0 0 chr20 36744785 36744818 -35409064 + AT_rich Low_complexity Low_complexity 1 33 0 332 261 0 54 chr20 36744848 36744959 -35408923 - MIR SINE MIR -69 193 89 2107 123 20 0 chr20 36745340 36745632 -35408250 + AluSx SINE Alu 1 298 -14 483 145 0 0 chr20 36745635 36745718 -35408164 + (GGGGA)n Simple_repeat Simple_repeat 3 85 0 211 301 36 12 chr20 36745949 36746032 -35407850 - MIR3 SINE MIR -117 91 7 555 244 122 39 chr20 36746153 36746358 -35407524 - MIR SINE MIR -12 250 29 219 310 14 14 chr20 36746748 36746819 -35407063 - L2 LINE L2 -20 3252 3182 1597 164 32 86 chr20 36746825 36746983 -35406899 + MLT1A1 LTR MaLR 1 166 -199 522 119 18 83 chr20 36746983 36747092 -35406790 + U13 snRNA snRNA 3 104 0 1597 164 32 86 chr20 36747092 36747306 -35406576 + MLT1A1 LTR MaLR 166 353 -12 250 361 21 7 chr20 36747421 36747565 -35406317 + MIR3 SINE MIR 9 154 -54 192 297 93 8 chr20 36747960 36748078 -35405804 - MIR3 SINE MIR -74 134 7 451 272 74 19 chr20 36748714 36748876 -35405006 + MIR3 SINE MIR 32 202 -6 218 337 47 0 chr20 36749319 36749405 -35404477 + MIR SINE MIR 57 146 -116 1988 132 33 0 chr20 36749452 36749749 -35404133 - AluSx SINE Alu 0 308 3 193 288 68 0 chr20 36749856 36749915 -35403967 - MIR SINE MIR -6 256 194 491 273 88 90 chr20 36749936 36749986 -35403896 + L2 LINE L2 2665 2714 -558 2428 65 0 32 chr20 36749986 36750318 -35403564 + AluY SINE Alu 1 311 0 491 273 88 90 chr20 36750318 36750629 -35403253 + L2 LINE L2 2714 3023 -249 239 312 32 32 chr20 36750707 36750800 -35403082 + L2 LINE L2 3221 3313 0 198 244 0 0 chr20 36750835 36750880 -35403002 + L2 LINE L2 3210 3254 -18 624 311 26 4 chr20 36751331 36751559 -35402323 + MIR SINE MIR 29 261 -1 2601 63 3 0 chr20 36752383 36752685 -35401197 - AluSp SINE Alu -10 303 1 511 247 93 6 chr20 36753595 36753757 -35400125 + MIR3 SINE MIR 22 197 -11 391 318 93 13 chr20 36754107 36754258 -35399624 + MIR SINE MIR 28 190 -72 185 349 83 0 chr20 36755588 36755720 -35398162 + L2 LINE L2 1994 2136 -1178 744 200 65 35 chr20 36755777 36755947 -35397935 - FAM SINE Alu 0 175 1 2312 123 0 0 chr20 36755950 36756260 -35397622 - AluSx SINE Alu -1 311 2 21 36 0 0 chr20 36756264 36756292 -35397590 + AT_rich Low_complexity Low_complexity 1 28 0 497 245 80 37 chr20 36756463 36756726 -35397156 - L1ME2 LINE L1 -327 5837 5565 261 0 0 0 chr20 36756807 36756836 -35397046 + (TC)n Simple_repeat Simple_repeat 2 30 0 2264 105 3 10 chr20 36756836 36756995 -35396887 - AluSq SINE Alu -20 293 135 2413 84 3 0 chr20 36756995 36757294 -35396588 - AluSp SINE Alu -13 300 1 2264 105 3 10 chr20 36757294 36757429 -35396453 - AluSq SINE Alu -178 135 1 320 317 17 17 chr20 36757580 36757700 -35396182 + MIR SINE MIR 103 222 -40 269 336 55 0 chr20 36757710 36757820 -35396062 - MIR SINE MIR -74 134 19 1730 190 108 40 chr20 36758147 36758620 -35395262 - MLT1D LTR MaLR 0 505 1 363 266 216 0 chr20 36759358 36759497 -35394385 + MIR3 SINE MIR 37 205 -3 2125 110 13 10 chr20 36759594 36759893 -35393989 + AluJb SINE Alu 1 300 -12 211 282 120 43 chr20 36759991 36760108 -35393774 - MIR SINE MIR -67 141 16 339 186 0 14 chr20 36760122 36760192 -35393690 - MIR SINE MIR -170 92 24 395 331 43 12 chr20 36760311 36760474 -35393408 + MIR3 SINE MIR 35 202 -6 2212 123 3 13 chr20 36760872 36761182 -35392700 - AluSx SINE Alu -5 307 1 592 273 60 0 chr20 36761216 36761399 -35392483 - MIR SINE MIR -53 209 16 444 288 74 0 chr20 36761432 36761595 -35392287 + MIR SINE MIR 23 197 -65 561 139 24 72 chr20 36762153 36762199 -35391683 - L1MB3 LINE L1 -7 6176 6129 1830 157 0 30 chr20 36762199 36762499 -35391383 - AluJb SINE Alu -21 291 1 561 139 24 72 chr20 36762499 36762598 -35391284 - L1MB3 LINE L1 -54 6129 6027 1609 202 10 3 chr20 36762598 36762890 -35390992 - AluJo SINE Alu -5 307 14 1474 165 21 118 chr20 36762894 36763082 -35390800 - AluJb SINE Alu -5 307 165 2036 150 3 7 chr20 36763082 36763389 -35390493 - AluJb SINE Alu 0 312 7 1474 165 21 118 chr20 36763389 36763540 -35390342 - AluJb SINE Alu -147 165 1 2230 112 3 0 chr20 36763547 36763843 -35390039 - AluSp SINE Alu -16 297 1 561 139 24 72 chr20 36763843 36764276 -35389606 - L1MB3 LINE L1 -165 6018 5613 2211 90 13 7 chr20 36764282 36764581 -35389301 - AluSx SINE Alu -11 301 1 771 311 28 0 chr20 36764595 36764843 -35389039 - MIR SINE MIR -6 256 2 344 236 0 22 chr20 36765465 36765554 -35388328 - L1MC5 LINE L1 -50 7911 7825 333 233 39 43 chr20 36765630 36765740 -35388142 + MIR3 SINE MIR 56 165 -67 2426 94 7 0 chr20 36765740 36766049 -35387833 - AluSp SINE Alu -2 311 1 333 233 39 43 chr20 36766049 36766062 -35387820 + MIR3 SINE MIR 165 177 -55 2076 134 0 49 chr20 36766062 36766390 -35387492 - AluSx SINE Alu 0 312 1 333 233 39 43 chr20 36766390 36766401 -35387481 + MIR3 SINE MIR 177 190 -42 331 254 180 17 chr20 36766415 36766563 -35387319 + MIR SINE MIR 34 195 -62 194 241 76 89 chr20 36767198 36767277 -35386605 + MIR SINE MIR 74 151 -57 705 300 44 58 chr20 36767740 36767845 -35386037 - L1ME4a LINE L1 -92 6029 5924 2451 92 3 6 chr20 36767845 36768159 -35385723 + AluSq SINE Alu 1 313 0 705 300 44 58 chr20 36768159 36768573 -35385309 - L1ME4a LINE L1 -197 5924 5517 195 42 0 0 chr20 36768757 36768781 -35385101 + (CTGTG)n Simple_repeat Simple_repeat 3 26 0 435 19 0 0 chr20 36769150 36769202 -35384680 + (TG)n Simple_repeat Simple_repeat 2 53 0 231 133 0 0 chr20 36769719 36769764 -35384118 + (TG)n Simple_repeat Simple_repeat 1 45 0 2528 90 0 0 chr20 36769860 36770172 -35383710 - AluSx SINE Alu 0 312 1 443 234 170 0 chr20 36770174 36770315 -35383567 - MIR3 SINE MIR -27 181 17 620 237 216 0 chr20 36770796 36770986 -35382896 - MIR SINE MIR -2 260 30 603 189 31 99 chr20 36771038 36771181 -35382701 - MER5A DNA MER1_type -8 181 53 1884 75 0 36 chr20 36771181 36771434 -35382448 + AluSg1 SINE Alu 55 298 -11 603 189 31 99 chr20 36771434 36771481 -35382401 - MER5A DNA MER1_type -136 53 4 256 269 119 22 chr20 36771534 36771668 -35382214 + L2 LINE L2 2601 2747 -567 567 177 323 0 chr20 36771687 36771845 -35382037 + MER3 DNA MER1_type 1 209 0 1971 171 0 3 chr20 36772884 36773194 -35380688 + AluJb SINE Alu 1 309 -3 315 157 259 19 chr20 36773315 36773423 -35380459 - L1ME3A LINE L1 -10 6160 6027 619 254 64 47 chr20 36773446 36773682 -35380200 + MIR SINE MIR 4 243 -19 466 266 49 0 chr20 36775091 36775234 -35378648 - MIR SINE MIR -34 228 79 249 236 182 36 chr20 36775802 36775912 -35377970 + L2 LINE L2 2947 3072 -200 934 178 138 57 chr20 36775932 36776082 -35377800 - MER33 DNA MER1_type -2263 322 186 2387 84 0 10 chr20 36776082 36776378 -35377504 - AluSq SINE Alu -8 305 13 934 178 138 57 chr20 36776378 36776525 -35377357 - MER33 DNA MER1_type -2399 186 1 670 264 92 13 chr20 36776544 36776771 -35377111 + MIR SINE MIR 11 255 -7 199 307 149 35 chr20 36776811 36776925 -35376957 + L2 LINE L2 3144 3270 -2 284 275 12 25 chr20 36777007 36777087 -35376795 + MIR SINE MIR 71 149 -59 362 264 85 0 chr20 36777384 36777490 -35376392 - MIR SINE MIR -58 150 53 188 300 20 0 chr20 36777585 36777635 -35376247 + MIR SINE MIR 110 160 -102 324 270 40 20 chr20 36777779 36777839 -35376043 + MIR SINE MIR 83 147 -115 2665 26 0 20 chr20 36777839 36778144 -35375738 + AluY SINE Alu 1 299 -12 324 270 40 20 chr20 36778144 36778183 -35375699 + MIR SINE MIR 147 184 -78 24 32 0 0 chr20 36778234 36778265 -35375617 + AT_rich Low_complexity Low_complexity 1 31 0 407 267 82 15 chr20 36779664 36779799 -35374083 - MIR3 SINE MIR -32 176 33 292 289 13 32 chr20 36780515 36780671 -35373211 + G-rich Low_complexity Low_complexity 2 154 0 192 77 0 0 chr20 36780733 36780759 -35373123 + (CCG)n Simple_repeat Simple_repeat 3 28 0 29 28 0 0 chr20 36780811 36780847 -35373035 + GC_rich Low_complexity Low_complexity 1 36 0 321 301 0 26 chr20 36782476 36782589 -35371293 - MIR3 SINE MIR -86 122 13 2237 93 0 0 chr20 36782966 36783255 -35370627 + AluSc SINE Alu 4 292 -17 629 243 178 5 chr20 36783318 36783532 -35370350 - MIR SINE MIR -10 252 2 845 214 63 48 chr20 36783970 36784222 -35369660 - MIR SINE MIR 0 262 7 339 284 113 49 chr20 36784270 36784597 -35369285 - L2 LINE L2 -71 3201 2854 478 284 101 41 chr20 36784631 36784849 -35369033 + MIR SINE MIR 26 256 -6 274 294 54 0 chr20 36785307 36785399 -35368483 + L1ME LINE L1 5713 5809 -312 192 170 85 0 chr20 36785653 36785700 -35368182 - MIR SINE MIR -75 133 83 604 302 25 5 chr20 36785833 36786035 -35367847 + MIR SINE MIR 50 255 -7 2430 88 0 19 chr20 36786321 36786639 -35367243 + AluSx SINE Alu 1 312 0 356 269 89 70 chr20 36786669 36786985 -35366897 - L1ME4a LINE L1 -94 6027 5706 223 274 0 0 chr20 36787298 36787360 -35366522 + MIR SINE MIR 86 147 -115 193 229 0 0 chr20 36787376 36787411 -35366471 - L2 LINE L2 -23 3249 3215 2167 99 3 10 chr20 36787435 36787774 -35366108 - AluSx SINE Alu 0 357 21 1797 159 13 23 chr20 36787781 36788083 -35365799 - AluJo SINE Alu -13 299 1 281 242 165 7 chr20 36788139 36788240 -35365642 - MIR SINE MIR -95 113 6 364 211 0 56 chr20 36788417 36788507 -35365375 + MIR3 SINE MIR 14 98 -110 356 216 207 0 chr20 36789180 36789291 -35364591 - L1ME4a LINE L1 0 6121 5988 497 281 12 24 chr20 36789312 36789479 -35364403 - MIR SINE MIR -10 252 88 944 236 152 39 chr20 36789555 36789875 -35364007 - LTR33 LTR ERVL 0 521 144 2023 125 59 0 chr20 36789875 36790163 -35363719 - AluSx SINE Alu -7 305 1 944 236 152 39 chr20 36790163 36790249 -35363633 - LTR33 LTR ERVL -377 144 69 2170 120 3 19 chr20 36790689 36791005 -35362877 - AluSx SINE Alu -1 311 1 2189 136 0 0 chr20 36791006 36791301 -35362581 - AluSx SINE Alu -17 295 1 227 302 36 72 chr20 36791341 36791436 -35362446 - MIR SINE MIR -62 200 110 2474 90 0 0 chr20 36791436 36791735 -35362147 + AluSx SINE Alu 1 299 -13 227 302 36 72 chr20 36791735 36791778 -35362104 - MIR SINE MIR -152 110 67 276 303 0 0 chr20 36791960 36792036 -35361846 + MIR SINE MIR 79 154 -108 919 214 21 34 chr20 36792234 36792468 -35361414 + MIR SINE MIR 32 262 0 361 300 60 13 chr20 36792464 36792614 -35361268 - L2 LINE L2 -36 3277 3121 * 1693 147 93 7 chr20 36792624 36792903 -35360979 + AluSx SINE Alu 1 303 -9 697 133 7 15 chr20 36792926 36793061 -35360821 + L1MB4 LINE L1 6013 6146 -34 447 299 46 94 chr20 36793183 36793444 -35360438 - L2 LINE L2 -345 2969 2734 2126 120 0 3 chr20 36793444 36793773 -35360109 + AluSx SINE Alu 1 328 0 447 299 46 94 chr20 36793773 36793947 -35359935 - L2 LINE L2 -580 2734 2553 453 335 28 56 chr20 36794528 36794556 -35359326 - MIR SINE MIR -14 248 221 2052 95 3 76 chr20 36794556 36794871 -35359011 - AluSc SINE Alu -17 292 1 453 335 28 56 chr20 36794871 36794965 -35358917 - MIR SINE MIR -41 221 126 2223 105 17 3 chr20 36794965 36795259 -35358623 + AluSg SINE Alu 1 298 -12 453 335 28 56 chr20 36795259 36795386 -35358496 - MIR SINE MIR -136 126 5 25 65 0 0 chr20 36796160 36796206 -35357676 + AT_rich Low_complexity Low_complexity 1 46 0 251 276 143 0 chr20 36796341 36796439 -35357443 - L1ME4a LINE L1 -65 6056 5945 2200 99 36 10 chr20 36798095 36798398 -35355484 - AluSx SINE Alu -1 311 1 2359 110 3 0 chr20 36798609 36798918 -35354964 - AluSx SINE Alu -1 311 2 186 43 0 0 chr20 36798957 36798980 -35354902 + (TC)n Simple_repeat Simple_repeat 2 24 0 221 256 11 56 chr20 36799615 36799705 -35354177 + CT-rich Low_complexity Low_complexity 2 87 0 441 299 65 39 chr20 36800074 36800125 -35353757 - MIR SINE MIR -6 256 208 1644 132 82 69 chr20 36800125 36800284 -35353598 - AluJo SINE Alu -5 307 141 2129 133 0 19 chr20 36800284 36800592 -35353290 - AluSx SINE Alu -10 302 1 1644 132 82 69 chr20 36800592 36800735 -35353147 - AluJo SINE Alu -171 141 1 441 299 65 39 chr20 36800735 36800914 -35352968 - MIR SINE MIR -54 208 20 196 309 128 21 chr20 36801018 36801112 -35352770 - MIR3 SINE MIR -46 162 59 2420 107 0 0 chr20 36802641 36802951 -35350931 - AluSx SINE Alu -2 310 1 2102 118 3 55 chr20 36804794 36805124 -35348758 + AluSq SINE Alu 1 313 0 200 218 73 0 chr20 36805198 36805253 -35348629 - MIR SINE MIR -84 124 66 334 280 20 0 chr20 36805395 36805495 -35348387 - MIR SINE MIR -86 122 21 276 296 66 62 chr20 36806066 36806309 -35347573 - L3 LINE CR1 -84 1493 1250 324 290 138 0 chr20 36806404 36806549 -35347333 + MIR SINE MIR 88 252 -10 618 235 206 5 chr20 36806569 36806773 -35347109 + MIR SINE MIR 2 246 -16 232 67 0 44 chr20 36806781 36806826 -35347056 + (TTA)n Simple_repeat Simple_repeat 2 44 0 570 226 111 46 chr20 36806889 36807106 -35346776 + MIR SINE MIR 14 244 -18 221 391 8 8 chr20 36807430 36807563 -35346319 - L3 LINE CR1 -710 867 735 326 229 46 9 chr20 36807689 36807798 -35346084 - MER103 DNA DNA -8 158 46 806 219 36 0 chr20 36807861 36808053 -35345829 + MIR SINE MIR 35 233 -29 201 121 0 0 chr20 36808060 36808093 -35345789 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 281 244 58 0 chr20 36808105 36808191 -35345691 + MIR SINE MIR 96 186 -76 263 307 165 29 chr20 36808522 36808791 -35345091 - Charlie8 DNA MER1_type -2142 275 47 2154 138 0 0 chr20 36809982 36810279 -35343603 + AluSx SINE Alu 11 307 -5 602 313 36 5 chr20 36811690 36811885 -35341997 + MIR SINE MIR 7 207 -55 212 311 29 39 chr20 36811962 36812065 -35341817 + MIR3 SINE MIR 56 157 -51 278 211 332 0 chr20 36812066 36812189 -35341693 - MER20 DNA MER1_type 0 219 56 297 314 171 0 chr20 36812557 36812697 -35341185 + MER117 DNA MER1_type 34 197 0 1220 208 37 0 chr20 36812915 36813156 -35340726 + MIR SINE MIR 13 262 0 414 317 41 7 chr20 36813975 36814120 -35339762 + L2 LINE L2 3122 3271 -1 218 313 0 12 chr20 36814121 36814204 -35339678 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 549 0 0 0 chr20 36814601 36814662 -35339220 + (CA)n Simple_repeat Simple_repeat 2 62 0 252 0 0 0 chr20 36814661 36814689 -35339193 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 1094 100 7 0 chr20 36814717 36814857 -35339025 + AluSq/x SINE Alu 1 141 -171 437 100 0 0 chr20 36814857 36814927 -35338955 + Alu SINE Alu 239 308 -1 608 313 97 45 chr20 36815091 36815893 -35337989 + L2 LINE L2 2467 3312 -1 1881 140 31 7 chr20 36815934 36816227 -35337655 + AluJo SINE Alu 13 312 0 337 292 0 44 chr20 36817469 36817582 -35336300 + MER5A DNA MER1_type 9 116 -73 376 270 142 7 chr20 36817757 36817905 -35335977 + MIR SINE MIR 82 249 -13 2424 101 16 0 chr20 36817963 36818270 -35335612 + AluSx SINE Alu 1 312 0 2332 99 3 10 chr20 36818270 36818574 -35335308 + AluSc SINE Alu 1 302 -7 260 374 46 39 chr20 36818647 36818928 -35334954 - L2 LINE L2 -5 3267 2985 272 270 108 60 chr20 36819209 36819394 -35334488 + MIR SINE MIR 20 213 -49 587 306 72 10 chr20 36819817 36820010 -35333872 - MIR SINE MIR -12 250 46 248 203 68 14 chr20 36820032 36820106 -35333776 + MIR SINE MIR 42 119 -89 327 322 77 0 chr20 36822175 36822318 -35331564 + MIR3 SINE MIR 23 176 -32 462 286 23 0 chr20 36824336 36824469 -35329413 + MER5A DNA MER1_type 50 185 -4 749 231 77 0 chr20 36824839 36825008 -35328874 + MIR SINE MIR 43 224 -38 390 311 113 0 chr20 36825190 36825341 -35328541 - MIR3 SINE MIR -13 195 28 211 297 93 42 chr20 36826175 36826293 -35327589 + MIR SINE MIR 89 212 -50 228 263 0 0 chr20 36826791 36826867 -35327015 + CT-rich Low_complexity Low_complexity 1 76 0 199 311 159 42 chr20 36828250 36828514 -35325368 - L3 LINE CR1 -150 1427 1133 2248 92 27 0 chr20 36828531 36828660 -35325222 + AluSx SINE Alu 1 125 -187 234 0 0 0 chr20 36828660 36828686 -35325196 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2248 92 27 0 chr20 36828686 36828850 -35325032 + AluSx SINE Alu 125 302 -10 345 273 87 37 chr20 36829287 36829448 -35324434 + MIR SINE MIR 84 252 -10 361 252 58 58 chr20 36830077 36830216 -35323666 + MIR3 SINE MIR 10 148 -60 1222 113 0 23 chr20 36830491 36830668 -35323214 - AluSp SINE Alu -4 309 137 2347 93 0 3 chr20 36830669 36830960 -35322922 - AluSc SINE Alu -19 290 1 430 295 80 2 chr20 36831319 36831486 -35322396 + MIR3 SINE MIR 27 204 -4 187 264 33 55 chr20 36836675 36836766 -35317116 + L2 LINE L2 3008 3096 -217 199 178 22 22 chr20 36836852 36836897 -35316985 + L2 LINE L2 3266 3310 -3 1155 113 5 54 chr20 36836938 36837123 -35316759 + FRAM SINE Alu 1 175 -1 2271 116 20 0 chr20 36837126 36837428 -35316454 + AluSx SINE Alu 3 310 -2 302 303 0 20 chr20 36837475 36837574 -35316308 + MER102a DNA MER1_type 234 330 0 2236 121 0 0 chr20 36837591 36837889 -35315993 + AluSx SINE Alu 1 298 -14 1809 154 47 23 chr20 36839135 36839434 -35314448 + AluJo SINE Alu 1 306 -6 193 156 0 0 chr20 36839558 36839591 -35314291 + MIR SINE MIR 74 105 -157 365 317 92 16 chr20 36839861 36840164 -35313718 - L1MC4a LINE L1 -1908 5900 5575 243 247 106 24 chr20 36840951 36841036 -35312846 + MIR SINE MIR 59 150 -112 610 283 26 39 chr20 36841124 36841354 -35312528 - MIR SINE MIR -33 229 3 206 206 0 0 chr20 36841710 36841744 -35312138 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 193 223 233 19 chr20 36841744 36841847 -35312035 - L2 LINE L2 0 3313 3189 * 290 253 11 23 chr20 36841830 36841917 -35311965 - L2 LINE L2 0 3272 3187 * 681 230 5 63 chr20 36841916 36842107 -35311775 + MIR SINE MIR 60 239 -23 309 272 72 73 chr20 36842205 36842612 -35311270 - L2 LINE L2 -203 3069 2661 318 318 48 0 chr20 36842641 36842767 -35311115 - L2 LINE L2 -2 3311 3180 632 172 210 6 chr20 36842957 36843114 -35310768 + MER5A DNA MER1_type 1 189 0 670 228 68 14 chr20 36844132 36844382 -35309500 + MIR SINE MIR 3 262 0 306 257 38 29 chr20 36844497 36844602 -35309280 - MIR SINE MIR -67 141 36 204 240 307 13 chr20 36844620 36844695 -35309187 + L2 LINE L2 3176 3272 0 243 333 11 11 chr20 36845278 36845371 -35308511 + MIR3 SINE MIR 13 105 -103 216 286 26 13 chr20 36846325 36846402 -35307480 - L2 LINE L2 -1 3312 3235 270 284 88 61 chr20 36847383 36847531 -35306351 - L2 LINE L2 -5 3267 3116 299 275 196 0 chr20 36848133 36848271 -35305611 + MIR3 SINE MIR 36 200 -8 2225 111 0 7 chr20 36848920 36849217 -35304665 - AluY SINE Alu -16 295 1 1059 111 0 0 chr20 36849217 36849352 -35304530 - AluSq/x SINE Alu -176 136 2 494 256 8 0 chr20 36849562 36849683 -35304199 + L1ME3 LINE L1 5854 5975 -187 444 251 34 50 chr20 36849726 36849919 -35303963 + L1ME3 LINE L1 5979 6162 0 1015 160 52 45 chr20 36850117 36850385 -35303497 + MER33 DNA MER1_type 1 226 -2359 2015 132 14 7 chr20 36850385 36850680 -35303202 + AluSx SINE Alu 1 297 -15 1015 160 52 45 chr20 36850680 36850740 -35303142 + MER33 DNA MER1_type 226 284 -40 2282 113 0 0 chr20 36850848 36851139 -35302743 - AluSx SINE Alu -19 293 3 342 130 0 0 chr20 36851149 36851203 -35302679 + MER33 DNA MER1_type 271 324 0 268 271 31 42 chr20 36851368 36851464 -35302418 - MER5A DNA MER1_type -31 158 64 402 278 53 20 chr20 36851516 36851667 -35302215 + MIR3 SINE MIR 3 158 -50 310 283 10 20 chr20 36852256 36852355 -35301527 + MIR SINE MIR 56 153 -109 410 296 0 43 chr20 36852364 36852581 -35301301 - MIR SINE MIR 0 262 16 195 289 0 0 chr20 36852651 36852703 -35301179 + MIR SINE MIR 211 262 0 207 0 0 0 chr20 36852946 36852969 -35300913 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 2027 144 13 7 chr20 36853052 36853357 -35300525 + AluJo SINE Alu 1 307 -5 350 273 167 0 chr20 36853409 36853559 -35300323 + MIR SINE MIR 73 247 -15 242 259 235 0 chr20 36854016 36854101 -35299781 + MIR SINE MIR 41 145 -63 331 291 91 0 chr20 36854167 36854277 -35299605 - L2 LINE L2 -5 3267 3148 418 249 129 91 chr20 36854313 36854439 -35299443 - MIR SINE MIR 0 262 142 980 178 6 0 chr20 36854439 36854602 -35299280 + FAM SINE Alu 1 164 -11 418 249 129 91 chr20 36854602 36854716 -35299166 - MIR SINE MIR -120 142 13 200 273 30 15 chr20 36855000 36855066 -35298816 + MIR SINE MIR 25 91 -171 640 220 0 0 chr20 36855066 36855184 -35298698 - FAM SINE Alu -57 128 11 201 108 0 0 chr20 36855505 36855542 -35298340 + (TA)n Simple_repeat Simple_repeat 2 38 0 278 210 32 0 chr20 36857385 36857447 -35296435 - L2 LINE L2 -4 3268 3205 487 313 43 39 chr20 36858301 36858496 -35295386 + MIR3 SINE MIR 5 201 -7 407 35 18 0 chr20 36858831 36858888 -35294994 + (TC)n Simple_repeat Simple_repeat 2 59 0 628 285 119 34 chr20 36858964 36859350 -35294532 - L2 LINE L2 -5 3308 2890 490 221 35 74 chr20 36859439 36859536 -35294346 + MER113 DNA MER1_type? 8 107 -414 2437 95 0 3 chr20 36859536 36859842 -35294040 + AluSx SINE Alu 1 305 -7 490 221 35 74 chr20 36859842 36859975 -35293907 + MER113 DNA MER1_type? 107 229 -292 334 316 65 39 chr20 36860118 36860273 -35293609 - L1MC4 LINE L1 -1277 6765 6607 1014 101 137 0 chr20 36860655 36860823 -35293059 + MER20 DNA MER1_type 29 219 0 393 249 179 18 chr20 36861214 36861379 -35292503 + MIR SINE MIR 2 186 -63 2405 85 0 0 chr20 36861393 36861686 -35292196 + AluSx SINE Alu 1 293 -19 369 242 0 11 chr20 36861701 36861792 -35292090 + MLT2C2 LTR ERVL 373 462 -2 270 259 37 37 chr20 36861845 36861953 -35291929 - L2 LINE L2 0 3272 3165 234 316 68 15 chr20 36862731 36862864 -35291018 + MIR SINE MIR 18 157 -105 386 310 220 13 chr20 36863012 36863442 -35290440 - L2 LINE L2 -194 3078 2544 333 247 27 0 chr20 36863518 36863591 -35290291 - L2 LINE L2 0 3272 3198 442 0 0 0 chr20 36863770 36863819 -35290063 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2094 109 3 11 chr20 36863819 36864103 -35289779 - AluSg SINE Alu -1 330 1 726 235 88 21 chr20 36864125 36864363 -35289519 + MER112 DNA MER1_type 1 254 -2 2113 140 3 0 chr20 36864494 36864802 -35289080 + AluSx SINE Alu 1 309 -3 289 324 50 22 chr20 36864819 36864958 -35288924 + L2 LINE L2 3122 3264 -8 205 346 26 0 chr20 36865169 36865247 -35288635 + MIR SINE MIR 70 149 -59 199 347 165 8 chr20 36865512 36865633 -35288249 + MIR3 SINE MIR 6 145 -63 313 295 188 0 chr20 36865678 36865790 -35288092 + MIR SINE MIR 118 250 -12 205 293 29 103 chr20 36866733 36866907 -35286975 + MER5A DNA MER1_type 29 189 0 221 261 0 0 chr20 36866948 36866994 -35286888 - MIR SINE MIR -133 75 30 274 233 44 11 chr20 36867160 36867250 -35286632 - L1ME4a LINE L1 -70 6051 5959 652 306 229 26 chr20 36867279 36867524 -35286358 - L1ME4a LINE L1 -118 6003 5809 2035 90 47 7 chr20 36867524 36867801 -35286081 + AluSq SINE Alu 1 288 -25 652 306 229 26 chr20 36867801 36868137 -35285745 - L1ME4a LINE L1 -312 5809 5304 864 171 0 26 chr20 36868160 36868312 -35285570 - AluJb SINE Alu -5 307 160 2397 57 0 11 chr20 36868384 36868712 -35285170 - AluY SINE Alu 0 325 1 1684 176 18 0 chr20 36868874 36869147 -35284735 - AluJo SINE Alu -9 303 26 1010 194 152 23 chr20 36869716 36869933 -35283949 - MIR SINE MIR -10 252 8 193 260 200 50 chr20 36870104 36870204 -35283678 + MIR SINE MIR 76 190 -72 556 290 25 12 chr20 36870233 36870395 -35283487 + MER5A DNA MER1_type 25 188 -1 244 348 167 0 chr20 36870530 36870668 -35283214 - L2 LINE L2 -9 3263 3103 1905 138 7 21 chr20 36871758 36872041 -35281841 + AluJo SINE Alu 1 279 -33 489 278 80 25 chr20 36872043 36872205 -35281677 - MIR SINE MIR -69 193 23 225 0 0 0 chr20 36872878 36872903 -35280979 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 368 311 9 19 chr20 36873006 36873112 -35280770 - L2 LINE L2 -1 3271 3167 211 303 173 40 chr20 36873253 36873576 -35280306 + L2 LINE L2 2564 2929 -385 2188 111 0 3 chr20 36873615 36873912 -35279970 + AluSq SINE Alu 11 306 -7 685 126 49 49 chr20 36873912 36874055 -35279827 - L1MB1 LINE L1 -6 6162 6020 212 224 26 13 chr20 36874135 36874211 -35279671 + CT-rich Low_complexity Low_complexity 2 78 0 1944 114 0 8 chr20 36874345 36874609 -35279273 - AluSx SINE Alu -2 310 49 519 250 56 14 chr20 36875675 36875819 -35278063 - MIR SINE MIR -56 206 57 526 256 35 17 chr20 36876601 36876773 -35277109 + L1ME1 LINE L1 5942 6116 -50 1142 174 8 58 chr20 36876874 36876936 -35276946 + AluJo SINE Alu 84 148 -164 1922 170 3 0 chr20 36876936 36877230 -35276652 + AluJb SINE Alu 3 297 -15 1142 174 8 58 chr20 36877230 36877408 -35276474 + AluJo SINE Alu 148 312 0 483 292 92 64 chr20 36878323 36878714 -35275168 - L2 LINE L2 0 3272 2871 4251 154 11 7 chr20 36879725 36880477 -35273405 + L1MB3 LINE L1 5254 6008 -175 1215 169 55 0 chr20 36880477 36880713 -35273169 + L1MB3 LINE L1 5935 6183 0 274 75 57 19 chr20 36880726 36880754 -35273128 + L1MB3 LINE L1 6129 6154 -29 1791 160 89 3 chr20 36880754 36881091 -35272791 - MER47A DNA MER2_type 0 366 1 274 75 57 19 chr20 36881091 36881115 -35272767 + L1MB3 LINE L1 6154 6183 0 1519 184 40 29 chr20 36883263 36883577 -35270305 + L1MB7 LINE L1 5816 6136 -48 2411 64 17 7 chr20 36883577 36883873 -35270009 + AluY SINE Alu 1 299 -12 1519 184 40 29 chr20 36883873 36883906 -35269976 + L1MB7 LINE L1 6136 6167 -17 232 324 14 14 chr20 36883907 36883978 -35269904 - MER5A DNA MER1_type -45 144 74 333 0 0 0 chr20 36884162 36884199 -35269683 + (CA)n Simple_repeat Simple_repeat 2 38 0 395 269 93 26 chr20 36884218 36884411 -35269471 - MIR SINE MIR -36 226 21 317 316 53 0 chr20 36884486 36884581 -35269301 + MIR SINE MIR 54 153 -55 2481 64 37 0 chr20 36884586 36884884 -35268998 + AluSc SINE Alu 1 309 0 1152 271 76 58 chr20 36886592 36886737 -35267145 - L2 LINE L2 -109 3204 3063 2598 60 3 0 chr20 36886737 36887038 -35266844 - AluY SINE Alu -9 302 1 1152 271 76 58 chr20 36887038 36887370 -35266512 - L2 LINE L2 -250 3063 2703 950 173 42 0 chr20 36887370 36887538 -35266344 - FAM SINE Alu 0 175 1 1152 271 76 58 chr20 36887538 36887746 -35266136 - L2 LINE L2 -610 2703 2500 1915 143 3 17 chr20 36888138 36888432 -35265450 + AluJo SINE Alu 8 297 -15 869 153 0 0 chr20 36889200 36889324 -35264558 + FLAM_C SINE Alu 4 127 -6 303 172 52 0 chr20 36889546 36889604 -35264278 - L1M LINE L1 -750 5371 5311 24 0 0 0 chr20 36889849 36889873 -35264009 + AT_rich Low_complexity Low_complexity 1 24 0 419 324 41 44 chr20 36890399 36890714 -35263168 + MLT1K LTR MaLR 212 525 -63 323 227 216 10 chr20 36890804 36890901 -35262981 - MIR3 SINE MIR -6 202 86 354 248 147 64 chr20 36891185 36891403 -35262479 - MIR SINE MIR -12 250 15 534 204 72 20 chr20 36891518 36891614 -35262268 - Charlie8 DNA MER1_type -2254 163 55 423 0 0 0 chr20 36891614 36891661 -35262221 + (CA)n Simple_repeat Simple_repeat 2 48 0 534 204 72 20 chr20 36891661 36891716 -35262166 - Charlie8 DNA MER1_type -2362 55 4 280 273 124 0 chr20 36892113 36892234 -35261648 + MIR3 SINE MIR 10 145 -63 455 306 107 25 chr20 36893053 36893295 -35260587 + L3 LINE CR1 1301 1562 -15 509 243 53 13 chr20 36894112 36894264 -35259618 + MIR SINE MIR 8 165 -97 263 242 126 21 chr20 36894687 36894782 -35259100 - MIR3 SINE MIR 0 208 104 * 374 290 27 25 chr20 36894763 36894922 -35258960 - MIR3 SINE MIR -16 192 31 24 0 0 0 chr20 36895233 36895257 -35258625 + GC_rich Low_complexity Low_complexity 1 24 0 630 300 109 19 chr20 36895436 36895913 -35257969 - L1ME4a LINE L1 -3 6118 5599 343 293 93 14 chr20 36895976 36896116 -35257766 - HAL1b LINE L1 -11 1337 1187 2442 93 0 0 chr20 36896162 36896472 -35257410 - AluY SINE Alu -1 310 1 1812 174 13 35 chr20 36896524 36896840 -35257042 - AluJo SINE Alu -3 309 1 272 325 76 10 chr20 36896845 36897042 -35256840 - L1ME LINE L1 -297 5824 5615 226 170 19 0 chr20 36897042 36897095 -35256787 + T-rich Low_complexity Low_complexity 1 54 0 277 288 0 0 chr20 36897855 36897921 -35255961 + GA-rich Low_complexity Low_complexity 2 67 0 1908 137 20 13 chr20 36898022 36898322 -35255560 + AluJo SINE Alu 1 302 -10 2253 119 3 0 chr20 36899074 36899385 -35254497 + AluSx SINE Alu 1 312 0 563 207 26 9 chr20 36899468 36899584 -35254298 - MIR SINE MIR -94 168 51 332 214 14 14 chr20 36899767 36899837 -35254045 + L2 LINE L2 3197 3266 -6 687 171 86 0 chr20 36899839 36899956 -35253926 + FLAM_A SINE Alu 1 127 -6 204 327 36 36 chr20 36900016 36900126 -35253756 + MIR SINE MIR 38 147 -61 189 0 0 0 chr20 36900374 36900395 -35253487 + (CCCCAG)n Simple_repeat Simple_repeat 1 21 0 339 234 262 0 chr20 36900916 36901057 -35252825 + MIR SINE MIR 29 206 -56 290 321 60 30 chr20 36901595 36901763 -35252119 - L2 LINE L2 -181 3091 2919 294 202 0 112 chr20 36902200 36902289 -35251593 - MIR SINE MIR -75 187 109 757 293 56 5 chr20 36902316 36902531 -35251351 + MIR SINE MIR 28 253 -9 282 263 35 0 chr20 36902564 36902621 -35251261 + L2 LINE L2 3136 3194 -78 1077 128 0 0 chr20 36902861 36903010 -35250872 + AluSq/x SINE Alu 1 149 -163 195 42 0 0 chr20 36903012 36903036 -35250846 + (GGAGAA)n Simple_repeat Simple_repeat 2 25 0 314 277 84 0 chr20 36903037 36903156 -35250726 + L1M4 LINE L1 3073 3201 -2945 410 168 37 56 chr20 36903915 36904022 -35249860 + LTR16C LTR ERVL 387 491 0 298 353 10 10 chr20 36904307 36904409 -35249473 - L2 LINE L2 -44 3228 3127 260 296 0 28 chr20 36904458 36904529 -35249353 - L2 LINE L2 0 3272 3204 539 191 52 151 chr20 36904573 36904667 -35249215 - MIR SINE MIR -2 260 158 2368 107 0 0 chr20 36904667 36904989 -35248893 - AluSx SINE Alu 0 322 1 1689 113 0 0 chr20 36904989 36905202 -35248680 - AluJb SINE Alu -15 297 85 539 191 52 151 chr20 36905202 36905355 -35248527 - MIR SINE MIR -102 160 35 1449 207 128 71 chr20 36905768 36906323 -35247559 - MLT1G3 LTR MaLR 0 595 11 862 161 11 0 chr20 36906587 36906761 -35247121 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 578 183 122 0 chr20 36906783 36906914 -35246968 + MIR SINE MIR 100 246 -16 2374 67 0 3 chr20 36906914 36907231 -35246651 + AluY SINE Alu 1 316 0 401 322 95 49 chr20 36907696 36908261 -35245621 - L2 LINE L2 -66 3206 2622 2270 120 7 0 chr20 36908531 36908840 -35245042 - AluSx SINE Alu -1 311 1 989 247 96 70 chr20 36908867 36909483 -35244399 - L1MEd LINE L1 -4869 1250 619 2530 239 68 22 chr20 36909520 36909739 -35244143 - L1ME3 LINE L1 -22 6140 5933 2007 153 3 7 chr20 36909739 36910040 -35243842 - AluJo SINE Alu -12 300 1 2530 239 68 22 chr20 36910040 36910560 -35243322 - L1ME3 LINE L1 -229 5933 5367 2026 128 17 10 chr20 36910715 36911012 -35242870 - AluJb SINE Alu -13 299 1 434 285 76 0 chr20 36911037 36911181 -35242701 + MER63A DNA MER1_type 56 210 0 492 244 81 48 chr20 36911182 36911391 -35242491 - MER46C DNA MER2_type -122 216 1 427 281 2 50 chr20 36911680 36911840 -35242042 + MIR SINE MIR 25 174 -34 915 262 106 54 chr20 36912360 36912561 -35241321 - L1ME3 LINE L1 -818 5328 5139 2161 130 3 3 chr20 36912561 36912861 -35241021 - AluJb SINE Alu -12 300 1 915 262 106 54 chr20 36912861 36913216 -35240666 - L1ME3 LINE L1 -1007 5139 4743 3949 168 19 30 chr20 36913217 36913986 -35239896 - L1MD2 LINE L1 0 6359 5599 2287 157 17 7 chr20 36913992 36914400 -35239482 - L1MC1 LINE L1 0 6333 5922 2386 127 11 14 chr20 36914400 36914770 -35239112 - Tigger2 DNA MER2_type 0 2718 2350 620 169 57 24 chr20 36914773 36914897 -35238985 - Tigger2 DNA MER2_type -2590 128 1 4451 116 5 3 chr20 36914897 36915595 -35238287 - L1MC1 LINE L1 -410 5923 5225 2072 170 56 0 chr20 36915595 36915972 -35237910 + Tigger3(Golem) DNA MER2_type 1 398 -2631 * 3498 116 5 84 chr20 36915970 36916036 -35237846 + Tigger3(Golem) DNA MER2_type 2425 2495 -533 2249 109 3 3 chr20 36916036 36916348 -35237534 - AluSx SINE Alu 0 312 1 3498 116 5 84 chr20 36916348 36916937 -35236945 + Tigger3(Golem) DNA MER2_type 2495 3028 0 3828 206 22 23 chr20 36916937 36917898 -35235984 - L1MC1 LINE L1 -920 5226 4267 1908 158 29 0 chr20 36917915 36918211 -35235671 - L1MD2 LINE L1 -639 5603 5282 207 0 0 0 chr20 36918211 36918234 -35235648 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1908 158 29 0 chr20 36918234 36918304 -35235578 - L1MD2 LINE L1 -960 5282 5216 2864 225 62 109 chr20 36918326 36918509 -35235373 - L1MD2 LINE L1 -1411 4735 4545 300 116 6 11 chr20 36918509 36918565 -35235317 - Alu SINE Alu -262 40 1 2864 225 62 109 chr20 36918565 36918758 -35235124 - L1MD2 LINE L1 -1601 4545 4345 2257 106 0 7 chr20 36918758 36919060 -35234822 + AluSx SINE Alu 1 300 -12 2864 225 62 109 chr20 36919060 36919563 -35234319 - L1MD2 LINE L1 -1801 4345 3820 1794 129 4 0 chr20 36919563 36919811 -35234071 - AluSx SINE Alu -63 249 1 2864 225 62 109 chr20 36919811 36919822 -35234060 - L1MD2 LINE L1 -2326 3820 3810 2084 127 0 10 chr20 36919822 36920122 -35233760 - AluSx SINE Alu -15 297 1 2864 225 62 109 chr20 36920122 36920133 -35233749 - L1MD2 LINE L1 -2336 3810 3800 1811 134 4 11 chr20 36920133 36920408 -35233474 - AluSx SINE Alu -13 299 27 2864 225 62 109 chr20 36920408 36920942 -35232940 - L1MD2 LINE L1 -2346 3800 3311 1672 138 24 0 chr20 36920945 36921199 -35232683 + AluSx SINE Alu 32 291 -21 429 174 54 0 chr20 37021358 37021450 -35132432 + MLT1A1 LTR MaLR 269 365 0 337 334 57 47 chr20 37021451 37021842 -35132040 + L2 LINE L2 2727 3114 -158 211 244 0 0 chr20 37021875 37021920 -35131962 + (TAA)n Simple_repeat Simple_repeat 3 47 0 276 338 103 14 chr20 37021920 37022065 -35131817 - L2 LINE L2 -10 3303 3146 293 188 159 0 chr20 37022080 37022149 -35131733 + MER116 DNA Mariner 1 80 0 180 337 69 30 chr20 37022230 37022331 -35131551 - L2 LINE L2 -253 3060 2956 214 378 67 38 chr20 37022504 37022742 -35131140 + L2 LINE L2 2810 3054 -218 378 59 0 0 chr20 37022893 37022944 -35130938 - L1M LINE L1 -927 5373 5323 335 215 201 9 chr20 37023374 37023516 -35130366 + MIR SINE MIR 21 184 -62 230 275 50 75 chr20 37023807 37023927 -35129955 - MIR3 SINE MIR -77 131 15 808 291 54 19 chr20 37024690 37025006 -35128876 - LTR16C LTR ERVL -10 481 155 338 253 55 11 chr20 37025135 37025226 -35128656 + L2 LINE L2 2976 3070 -202 807 244 47 19 chr20 37026164 37026377 -35127505 + MER58A DNA MER1_type 6 224 0 359 357 42 0 chr20 37026428 37026571 -35127311 + L2 LINE L2 3112 3260 -12 1019 202 81 4 chr20 37026944 37027202 -35126680 - LTR51 LTR ERV1 -14 657 380 654 154 9 0 chr20 37027302 37027412 -35126470 + AluJb SINE Alu 190 300 -12 1570 192 19 45 chr20 37028889 37028947 -35124935 + MLT1A1 LTR MaLR 1 59 -306 1565 143 4 22 chr20 37028947 37029219 -35124663 + AluSx SINE Alu 37 303 -9 1570 192 19 45 chr20 37029219 37029535 -35124347 + MLT1A1 LTR MaLR 59 365 0 3003 153 8 10 chr20 37030050 37030555 -35123327 - Tigger4(Zombi) DNA MER2_type -10 2721 2218 610 156 0 0 chr20 37030550 37030640 -35123242 - Tigger4(Zombi) DNA MER2_type -2640 91 2 * 750 177 15 0 chr20 37030804 37030934 -35122948 - FLAM_C SINE Alu -10 133 2 293 306 60 22 chr20 37031160 37031294 -35122588 + L2 LINE L2 3175 3313 0 672 94 0 0 chr20 37031309 37031405 -35122477 - AluSp/q SINE Alu -3 310 215 256 300 109 9 chr20 37032271 37032381 -35121501 + L2 LINE L2 2199 2319 -995 1052 133 0 6 chr20 37032981 37033139 -35120743 - AluSx SINE Alu -155 157 1 1666 161 7 17 chr20 37033142 37033440 -35120442 - AluJb SINE Alu -17 295 1 1914 119 3 11 chr20 37033708 37034038 -35119844 + AluSx SINE Alu 1 328 0 221 207 103 0 chr20 37034081 37034139 -35119743 - MIR SINE MIR -94 168 105 2136 110 0 0 chr20 37034205 37034504 -35119378 + AluSx SINE Alu 1 299 -13 188 295 181 29 chr20 37034640 37034745 -35119137 - L2 LINE L2 -211 3061 2941 1946 98 3 27 chr20 37034934 37035152 -35118730 - AluSq SINE Alu 0 346 137 1986 108 3 66 chr20 37035152 37035485 -35118397 - AluSx SINE Alu 0 312 1 1946 98 3 27 chr20 37035485 37035619 -35118263 - AluSq SINE Alu -209 137 1 1947 131 24 0 chr20 37036424 37036714 -35117168 - AluSq SINE Alu -16 297 1 2138 109 0 3 chr20 37036723 37037026 -35116856 - AluSq SINE Alu -11 302 1 384 318 155 8 chr20 37037074 37037319 -35116563 + L3 LINE CR1 916 1196 -381 183 316 238 18 chr20 37037413 37037581 -35116301 - MIR SINE MIR -1 261 57 611 249 223 0 chr20 37037726 37037923 -35115959 - MIR SINE MIR -16 246 6 1797 123 17 17 chr20 37037966 37038130 -35115752 - AluSx SINE Alu -13 299 133 2079 138 0 0 chr20 37038130 37038434 -35115448 - AluSx SINE Alu -8 304 1 1797 123 17 17 chr20 37038434 37038562 -35115320 - AluSx SINE Alu -178 134 7 239 143 24 0 chr20 37038581 37038623 -35115259 + MER116 DNA Mariner 38 80 0 2094 121 3 3 chr20 37038792 37039097 -35114785 - AluSq SINE Alu -8 305 1 297 0 0 0 chr20 37039192 37039225 -35114657 + (TG)n Simple_repeat Simple_repeat 2 34 0 1782 106 58 20 chr20 37039638 37039930 -35113952 + AluSq SINE Alu 1 303 -10 1282 175 4 32 chr20 37040157 37040409 -35113473 - AluJo SINE Alu -25 287 43 1449 136 21 0 chr20 37040417 37040660 -35113222 - L1MA5 LINE L1 -2 6298 6051 2299 85 0 3 chr20 37040670 37040975 -35112907 - AluY SINE Alu -5 306 3 2190 79 4 0 chr20 37040978 37041281 -35112601 - AluSx SINE Alu 0 308 5 1761 156 3 20 chr20 37041536 37041712 -35112170 - AluSx SINE Alu -2 310 140 2223 113 0 0 chr20 37041712 37042021 -35111861 - AluSq SINE Alu -4 309 1 1761 156 3 20 chr20 37042021 37042145 -35111737 - AluSx SINE Alu -172 140 15 222 37 0 0 chr20 37042167 37042194 -35111688 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 1051 221 33 36 chr20 37043649 37043662 -35110220 + L1ME3A LINE L1 5862 5874 -296 1992 119 0 10 chr20 37043662 37043957 -35109925 + AluSx SINE Alu 1 292 -20 1051 221 33 36 chr20 37043957 37044246 -35109636 + L1ME3A LINE L1 5874 6163 -7 2020 112 35 0 chr20 37044256 37044543 -35109339 + AluSx SINE Alu 4 300 -12 191 449 36 0 chr20 37044718 37044885 -35108997 + L2 LINE L2 2565 2737 -577 181 359 29 19 chr20 37044915 37045018 -35108864 + MIR SINE MIR 21 124 -138 185 316 26 103 chr20 37045214 37045369 -35108513 + L2 LINE L2 3129 3271 -1 650 308 72 0 chr20 37045779 37045974 -35107908 + MIR SINE MIR 38 246 -16 185 326 22 34 chr20 37045990 37046079 -35107803 + MIR SINE MIR 18 105 -103 317 187 0 33 chr20 37046115 37046206 -35107676 + T-rich Low_complexity Low_complexity 3 90 0 1755 116 0 0 chr20 37047388 37047638 -35106244 - AluSx SINE Alu -5 307 58 306 294 31 94 chr20 37047762 37047878 -35106004 + MIR3 SINE MIR 11 133 -75 348 24 0 0 chr20 37047878 37047919 -35105963 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 2258 106 3 0 chr20 37047923 37048235 -35105647 - AluSp SINE Alu 0 313 1 306 294 31 94 chr20 37048235 37048273 -35105609 + MIR3 SINE MIR 136 160 -48 209 217 31 147 chr20 37048416 37048443 -35105439 - L2 LINE L2 -235 3037 3008 1475 209 73 31 chr20 37048443 37048798 -35105084 + MLT1A2 LTR MaLR 1 370 -4 209 217 31 147 chr20 37048798 37048899 -35104983 - L2 LINE L2 -264 3008 2924 337 255 88 0 chr20 37049751 37049853 -35104029 - MLT1J LTR MaLR -249 262 152 451 236 45 9 chr20 37050665 37050775 -35103107 - MIR SINE MIR 0 262 149 554 233 136 10 chr20 37050788 37051091 -35102791 - L1 LINE L1 -3333 2813 2451 300 270 43 37 chr20 37051099 37051238 -35102644 - MIR SINE MIR -68 140 4 411 274 67 34 chr20 37051741 37051920 -35101962 + L2 LINE L2 2713 2897 -417 1597 226 53 10 chr20 37051921 37052319 -35101563 - L1M4 LINE L1 -1772 4374 3960 539 93 13 0 chr20 37052332 37052407 -35101475 + MADE1 DNA Mariner 1 76 -4 436 210 50 25 chr20 37052411 37052530 -35101352 + L2 LINE L2 3192 3313 0 457 253 36 47 chr20 37052958 37053108 -35100774 + MIR SINE MIR 42 195 -63 258 208 21 0 chr20 37053187 37053235 -35100647 + MER5B DNA MER1_type 13 61 -117 1338 144 55 23 chr20 37053237 37053493 -35100389 + L1MB5 LINE L1 5856 6119 -55 1798 243 34 40 chr20 37053513 37053734 -35100148 - L1ME1 LINE L1 -7 6159 5938 1752 159 34 0 chr20 37053734 37054029 -35099853 - AluSx SINE Alu -5 307 3 1798 243 34 40 chr20 37054029 37054147 -35099735 - L1ME1 LINE L1 -228 5938 5821 2344 66 0 7 chr20 37054147 37054452 -35099430 - AluY SINE Alu -8 303 1 1798 243 34 40 chr20 37054452 37054679 -35099203 - L1ME1 LINE L1 -345 5821 5596 281 337 48 59 chr20 37054692 37054766 -35099116 - L2 LINE L2 -1314 2000 1927 2110 122 0 0 chr20 37054766 37055069 -35098813 - AluSx SINE Alu -9 303 1 281 337 48 59 chr20 37055069 37055080 -35098802 - L2 LINE L2 -1387 1927 1917 2322 81 7 0 chr20 37055080 37055387 -35098495 - AluSg SINE Alu 0 310 2 281 337 48 59 chr20 37055387 37055573 -35098309 - L2 LINE L2 -1397 1917 1731 236 154 77 0 chr20 37055575 37055627 -35098255 + L1MB5 LINE L1 6113 6168 -6 2040 96 0 0 chr20 37055660 37055931 -35097951 + AluSx SINE Alu 1 271 -41 266 174 0 0 chr20 37055948 37055994 -35097888 + MER5B DNA MER1_type 133 178 0 528 206 118 7 chr20 37056010 37056146 -35097736 - MER58B DNA MER1_type -9 332 182 214 301 0 36 chr20 37056364 37056447 -35097435 + GA-rich Low_complexity Low_complexity 5 84 0 968 200 54 0 chr20 37057359 37057564 -35096318 - Tigger1 DNA MER2_type 0 2418 2203 782 227 29 5 chr20 37057565 37057772 -35096110 + L1 LINE L1 5088 5299 -847 1944 118 10 7 chr20 37057793 37058090 -35095792 + AluSx SINE Alu 1 298 -14 295 209 19 0 chr20 37058103 37058208 -35095674 + (TA)n Simple_repeat Simple_repeat 1 107 0 39 0 0 0 chr20 37058435 37058474 -35095408 + AT_rich Low_complexity Low_complexity 1 39 0 2112 104 0 0 chr20 37058474 37058793 -35095089 - AluSg SINE Alu 0 321 3 1654 164 19 16 chr20 37058963 37059274 -35094608 + AluJb SINE Alu 1 312 0 428 150 125 58 chr20 37059298 37059418 -35094464 - Tigger1 DNA MER2_type -2261 157 30 234 283 0 0 chr20 37059438 37059491 -35094391 + MIR SINE MIR 210 262 0 2142 101 7 7 chr20 37059572 37059878 -35094004 - AluSx SINE Alu -6 306 1 1646 184 0 7 chr20 37059880 37060174 -35093708 - AluJo SINE Alu -20 292 1 253 247 176 0 chr20 37060300 37060385 -35093497 + MIR SINE MIR 51 150 -58 377 341 8 0 chr20 37060961 37061093 -35092789 - MIR3 SINE MIR -24 184 52 2144 97 0 3 chr20 37062127 37062426 -35091456 - AluSp SINE Alu -14 299 2 1916 77 0 0 chr20 37062447 37062693 -35091189 - AluSg SINE Alu -9 301 56 1657 244 70 25 chr20 37062906 37063463 -35090419 - L1MD2 LINE L1 -3 6356 5775 1494 169 3 44 chr20 37064533 37064829 -35089053 + AluJo SINE Alu 23 306 -6 697 179 71 121 chr20 37065819 37065944 -35087938 - MER58A DNA MER1_type -2207 213 102 1651 193 3 0 chr20 37065944 37066245 -35087637 + AluJb SINE Alu 1 302 -10 697 179 71 121 chr20 37066245 37066343 -35087539 - MER58A DNA MER1_type -2318 102 1 866 144 0 22 chr20 37066429 37066568 -35087314 + AluJo SINE Alu 1 136 -176 515 115 0 124 chr20 37066819 37066854 -35087028 - L1MB4 LINE L1 -7 6173 6135 1609 196 0 13 chr20 37066854 37067166 -35086716 - AluJo SINE Alu -4 308 1 515 115 0 124 chr20 37067166 37067243 -35086639 - L1MB4 LINE L1 -45 6135 6075 2248 102 3 9 chr20 37067289 37067604 -35086278 - AluSp SINE Alu 0 313 1 249 33 0 0 chr20 37067690 37067720 -35086162 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1780 135 0 28 chr20 37067723 37068011 -35085871 - AluSx SINE Alu -32 280 1 543 295 120 51 chr20 37068118 37068371 -35085511 - L1M4 LINE L1 -1262 4884 4650 1989 117 0 26 chr20 37068371 37068678 -35085204 - AluSx SINE Alu -13 299 1 543 295 120 51 chr20 37068678 37068903 -35084979 - L1M4 LINE L1 -1496 4650 4364 2319 90 0 0 chr20 37068951 37069252 -35084630 + AluY SINE Alu 1 301 -10 2630 23 0 7 chr20 37069341 37069649 -35084233 - AluY SINE Alu -5 306 1 356 187 70 87 chr20 37069682 37069808 -35084074 + MIR3 SINE MIR 66 201 -7 188 361 12 0 chr20 37070240 37070323 -35083559 + MIR SINE MIR 16 99 -163 691 220 44 22 chr20 37070436 37070618 -35083264 - MIR SINE MIR -29 233 48 525 173 87 0 chr20 37070620 37070724 -35083158 + MER3 DNA MER1_type 97 209 0 501 125 147 96 chr20 37071238 37071267 -35082615 - L1MB1 LINE L1 -1 6167 6141 2396 78 0 0 chr20 37071267 37071574 -35082308 + AluSq SINE Alu 1 307 -6 501 125 147 96 chr20 37071574 37071680 -35082202 - L1MB1 LINE L1 -27 6141 6025 691 124 19 0 chr20 37071681 37071786 -35082096 - U6 snRNA snRNA 0 107 1 272 224 41 31 chr20 37072517 37072615 -35081267 - MIR SINE MIR -66 142 44 291 278 69 56 chr20 37073373 37073517 -35080365 - L2 LINE L2 -52 3261 3116 1100 142 18 53 chr20 37073580 37073805 -35080077 + AluJb SINE Alu 89 305 -7 361 259 151 44 chr20 37073814 37074103 -35079779 - L2 LINE L2 -305 3008 2693 373 342 18 0 chr20 37074127 37074238 -35079644 + L2 LINE L2 3160 3272 0 347 229 8 59 chr20 37074725 37074781 -35079101 - L1ME1 LINE L1 -5 6161 6113 2234 82 7 0 chr20 37074781 37075073 -35078809 + AluSp SINE Alu 1 294 -19 347 229 8 59 chr20 37075073 37075134 -35078748 - L1ME1 LINE L1 -53 6113 6050 2042 128 0 3 chr20 37075181 37075479 -35078403 - AluSx SINE Alu -15 297 1 2145 156 27 32 chr20 37075489 37075539 -35078343 - L1MB2 LINE L1 -2 6169 6120 2380 80 0 0 chr20 37075539 37075841 -35078041 - AluSx SINE Alu -10 302 1 2145 156 27 32 chr20 37075841 37076200 -35077682 - L1MB2 LINE L1 -51 6120 5762 726 157 0 25 chr20 37076212 37076333 -35077549 - FAM SINE Alu -8 41 1 2060 118 0 13 chr20 37076342 37076510 -35077372 - AluSx SINE Alu -11 301 137 2276 77 0 3 chr20 37076510 37076807 -35077075 - AluY SINE Alu -15 296 1 2060 118 0 13 chr20 37076807 37076943 -35076939 - AluSx SINE Alu -175 137 1 307 290 24 92 chr20 37077401 37077608 -35076274 - MLT1J2 LTR MaLR 0 450 258 589 177 142 0 chr20 37078141 37078254 -35075628 - FLAM_C SINE Alu -3 130 2 346 106 0 0 chr20 37078330 37078377 -35075505 - FRAM/FAM SINE Alu -106 60 14 1849 159 0 3 chr20 37078475 37078777 -35075105 - AluSx SINE Alu -11 301 1 5135 110 62 38 chr20 37079963 37080296 -35073586 - MER4D LTR ERV1 0 903 580 2265 91 3 7 chr20 37080296 37080605 -35073277 + AluSp SINE Alu 2 309 -4 5135 110 62 38 chr20 37080605 37080962 -35072920 - MER4D LTR ERV1 -323 580 183 2155 64 7 3 chr20 37080962 37081282 -35072600 - AluY SINE Alu 0 321 1 5135 110 62 38 chr20 37081282 37081470 -35072412 - MER4D LTR ERV1 -720 183 1 552 264 108 30 chr20 37083045 37083276 -35070606 + MIR SINE MIR 9 257 -5 363 370 42 0 chr20 37083476 37083641 -35070241 - MIR SINE MIR -56 206 35 1364 146 138 4 chr20 37085128 37085396 -35068486 + AluJo SINE Alu 1 304 -8 2373 76 0 0 chr20 37085930 37086233 -35067649 - AluY SINE Alu -8 303 1 884 149 56 19 chr20 37086309 37086470 -35067412 + AluSg/x SINE Alu 132 298 -12 761 178 151 20 chr20 37086473 37086625 -35067257 + AluJo/FRAM SINE Alu 129 300 -12 2122 99 0 0 chr20 37086720 37087029 -35066853 - AluSg SINE Alu 0 309 1 1620 141 43 7 chr20 37087667 37087971 -35065911 - AluSq SINE Alu 0 314 1 253 193 125 34 chr20 37088162 37088250 -35065632 + HERV30 LTR ERV1 4872 4967 -3290 449 356 58 23 chr20 37088329 37088503 -35065379 - L2 LINE L2 -20 3252 3073 2004 112 0 14 chr20 37089002 37089297 -35064585 + AluSq SINE Alu 7 297 -16 1510 101 142 12 chr20 37089297 37089575 -35064307 + AluSg1 SINE Alu 1 310 0 2245 79 0 0 chr20 37089754 37090118 -35063764 - AluSc SINE Alu 0 309 1 969 192 71 0 chr20 37090190 37090372 -35063510 - MER3 DNA MER1_type -14 195 1 2210 112 0 0 chr20 37092881 37093194 -35060688 + AluSq SINE Alu 1 313 0 710 106 39 0 chr20 37093507 37093611 -35060271 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 910 139 110 25 chr20 37093602 37093847 -35060035 + Tigger3(Golem) DNA MER2_type 2277 2542 -487 293 233 14 14 chr20 37093820 37093893 -35059989 + AluSp SINE Alu 122 194 -109 * 2022 116 23 0 chr20 37093911 37094212 -35059670 + AluSx SINE Alu 1 308 -4 1290 154 42 0 chr20 37094271 37094485 -35059397 + AluJb SINE Alu 73 295 -17 1491 146 45 150 chr20 37094486 37094726 -35059156 + Tigger3(Golem) DNA MER2_type 2588 2751 -277 2077 119 0 0 chr20 37094726 37095021 -35058861 - AluSg SINE Alu -15 295 1 1491 146 45 150 chr20 37095021 37095273 -35058609 + Tigger3(Golem) DNA MER2_type 2751 3028 0 2094 106 3 0 chr20 37095290 37095583 -35058299 - AluSq SINE Alu -17 296 3 871 95 8 8 chr20 37095587 37095713 -35058169 - AluSq/x SINE Alu -181 132 7 1000 163 93 73 chr20 37098248 37098561 -35055321 + MER33 DNA MER1_type 2 320 -4 203 179 51 0 chr20 37098613 37098652 -35055230 + MIR SINE MIR 156 196 -66 370 298 18 0 chr20 37098697 37098811 -35055071 + MIR SINE MIR 91 206 -56 243 0 0 0 chr20 37098874 37098901 -35054981 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1571 91 0 5 chr20 37098911 37099131 -35054751 - AluSq SINE Alu -94 219 1 244 208 75 0 chr20 37099133 37099186 -35054696 - MIR SINE MIR -98 164 108 829 227 46 21 chr20 37099400 37099594 -35054288 + Charlie8 DNA MER1_type 78 276 -2141 278 308 129 36 chr20 37099837 37100149 -35053733 - L2 LINE L2 -184 3088 2752 281 143 16 79 chr20 37100266 37100329 -35053553 - MIR3 SINE MIR -6 202 144 1239 120 0 5 chr20 37100415 37100599 -35053283 + AluSx SINE Alu 1 183 -129 195 282 28 14 chr20 37100822 37100893 -35052989 - MIR SINE MIR -121 141 70 199 358 92 8 chr20 37100949 37101069 -35052813 + L2 LINE L2 3141 3270 -2 2108 110 0 3 chr20 37101261 37101553 -35052329 + AluSg SINE Alu 1 291 -19 3200 188 55 0 chr20 37101553 37101751 -35052131 - L1MD2 LINE L1 -11 6348 6162 189 0 0 0 chr20 37101751 37101772 -35052110 + (TG)n Simple_repeat Simple_repeat 2 22 0 3200 188 55 0 chr20 37101772 37102189 -35051693 - L1MD2 LINE L1 -197 6162 5699 191 333 0 23 chr20 37102239 37102326 -35051556 + MIR SINE MIR 151 235 -27 2456 106 14 25 chr20 37102440 37102808 -35051074 - THE1B LTR MaLR 0 364 1 415 221 58 0 chr20 37102840 37102926 -35050956 - MIR SINE MIR -123 139 49 301 296 11 0 chr20 37102942 37103030 -35050852 - L2 LINE L2 -557 2757 2669 266 254 30 0 chr20 37103315 37103382 -35050500 - MIR3 SINE MIR -51 157 89 351 194 0 4 chr20 37103394 37103455 -35050427 - L1M3 LINE L1 -627 5541 5483 1273 166 64 0 chr20 37103503 37103617 -35050265 - AluJo SINE Alu -62 250 145 201 39 0 0 chr20 37103617 37103643 -35050239 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1273 166 64 0 chr20 37103643 37103763 -35050119 - AluJo SINE Alu -167 145 1 1200 106 0 0 chr20 37103804 37103983 -35049899 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 234 91 0 0 chr20 37103983 37104016 -35049866 + (TCTCC)n Simple_repeat Simple_repeat 3 35 0 1894 110 4 4 chr20 37104068 37104341 -35049541 - AluSx SINE Alu -39 273 1 2396 63 0 7 chr20 37105368 37105670 -35048212 - AluY SINE Alu -11 300 1 295 301 140 11 chr20 37105759 37106057 -35047825 - L1P LINE L1 -2237 3909 3573 1663 184 13 3 chr20 37106172 37106481 -35047401 + AluJb SINE Alu 1 312 0 1707 88 13 0 chr20 37106523 37106776 -35047106 + AluSq SINE Alu 55 310 0 1624 103 4 4 chr20 37107289 37107522 -35046360 - AluSg/x SINE Alu -11 299 67 1984 99 0 18 chr20 37107522 37107805 -35046077 - AluY SINE Alu -33 278 1 2092 117 0 0 chr20 37107820 37108111 -35045771 - AluSc SINE Alu -18 291 1 183 333 67 0 chr20 37108162 37108222 -35045660 + L2 LINE L2 3142 3205 -67 1935 133 17 0 chr20 37108294 37108588 -35045294 - AluSx SINE Alu -13 299 1 321 250 40 0 chr20 37108614 37108690 -35045192 - MIR3 SINE MIR -48 160 82 2180 156 43 54 chr20 37109903 37110345 -35043537 + LTR36 LTR ERV1 1 437 -174 1610 101 0 9 chr20 37110350 37110578 -35043304 - AluSg/x SINE Alu -2 308 83 310 224 15 15 chr20 37110578 37110645 -35043237 + LTR36 LTR ERV1 545 611 0 180 0 0 0 chr20 37110655 37110675 -35043207 + (A)n Simple_repeat Simple_repeat 1 20 0 1930 139 3 0 chr20 37110681 37110975 -35042907 + AluSx SINE Alu 1 295 -17 840 205 116 37 chr20 37110985 37111200 -35042682 - MER66B LTR ERV1 -3 483 252 305 77 0 0 chr20 37111199 37111238 -35042644 + U2 snRNA snRNA 1 39 -149 * 469 193 68 85 chr20 37111242 37111418 -35042464 - MER66B LTR ERV1 -217 269 97 230 284 167 0 chr20 37111498 37111600 -35042282 + MIR SINE MIR 87 205 -57 925 246 62 25 chr20 37112222 37112466 -35041416 + MIR SINE MIR 10 262 0 348 349 56 16 chr20 37112774 37113026 -35040856 - L1MC/D LINE L1 -2008 5800 5539 804 151 8 0 chr20 37113123 37113249 -35040633 + AluJb SINE Alu 5 131 -181 363 261 33 49 chr20 37113299 37113483 -35040399 - L1MC/D LINE L1 -797 5349 5169 2001 136 0 3 chr20 37113495 37113803 -35040079 - AluSx SINE Alu 0 312 6 189 0 0 0 chr20 37113808 37113829 -35040053 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1068 142 0 0 chr20 37113831 37113993 -35039889 - FRAM SINE Alu -17 159 1 2672 23 0 0 chr20 37114047 37114357 -35039525 - AluYa5 SINE Alu -1 310 1 557 280 63 51 chr20 37114409 37114555 -35039327 - L1MC4 LINE L1 -198 7844 7701 2038 96 0 0 chr20 37114555 37114826 -35039056 - AluSx SINE Alu -41 271 1 557 280 63 51 chr20 37114826 37115011 -35038871 - L1MC4 LINE L1 -341 7701 7509 1090 200 131 11 chr20 37115093 37115368 -35038514 - MLT1D LTR MaLR 0 505 198 525 203 110 0 chr20 37115457 37115575 -35038307 + MER63D DNA MER1_type 4 760 -76 195 125 188 21 chr20 37115634 37115682 -35038200 - L3 LINE CR1 -755 822 767 190 333 32 32 chr20 37116184 37116277 -35037605 + L2 LINE L2 1162 1254 -2060 183 265 0 20 chr20 37116280 37116329 -35037553 - L3 LINE CR1 -951 626 579 2372 61 3 0 chr20 37116523 37116819 -35037063 - AluY SINE Alu -14 297 1 238 217 0 0 chr20 37117301 37117347 -35036535 - Charlie8 DNA MER1_type -2346 71 26 417 264 97 28 chr20 37117872 37118075 -35035807 + MIR SINE MIR 27 256 -6 2740 13 0 0 chr20 37118078 37118411 -35035471 - AluY SINE Alu 0 333 1 2560 30 0 0 chr20 37118413 37118710 -35035172 - AluY SINE Alu -14 297 1 382 224 245 7 chr20 37119161 37119304 -35034578 + MIR3 SINE MIR 10 186 -22 819 150 0 0 chr20 37119589 37119709 -35034173 + FRAM SINE Alu 36 155 -21 21 57 0 0 chr20 37119830 37119865 -35034017 + AT_rich Low_complexity Low_complexity 1 35 0 362 200 0 0 chr20 37120409 37120469 -35033413 - FRAM/FAM SINE Alu -106 60 1 1480 184 3 31 chr20 37120498 37120786 -35033096 + AluJb SINE Alu 1 280 -32 870 129 32 0 chr20 37120829 37120984 -35032898 + L1MB8 LINE L1 6007 6166 -12 1671 160 0 57 chr20 37121285 37121455 -35032427 - AluJb SINE Alu -11 301 156 2274 80 0 0 chr20 37121455 37121754 -35032128 - AluY SINE Alu -12 299 1 1671 160 0 57 chr20 37121754 37121901 -35031981 - AluJb SINE Alu -156 156 2 190 250 62 12 chr20 37122196 37122276 -35031606 - L2 LINE L2 -410 2904 2821 548 191 25 94 chr20 37122448 37122542 -35031340 - MSTC LTR MaLR -238 158 80 891 144 0 0 chr20 37122542 37122667 -35031215 - FLAM_C SINE Alu -7 126 2 548 191 25 94 chr20 37122667 37122742 -35031140 - MSTC LTR MaLR -316 80 1 515 327 58 23 chr20 37122743 37123003 -35030879 - L2 LINE L2 -217 3096 2828 407 232 143 0 chr20 37123335 37123447 -35030435 + MIR SINE MIR 116 243 -19 504 292 0 26 chr20 37123927 37124081 -35029801 - MIR3 SINE MIR -1 207 58 252 336 70 7 chr20 37124276 37124419 -35029463 + MIR3 SINE MIR 43 194 -14 1545 195 3 13 chr20 37124537 37124850 -35029032 - AluJb SINE Alu -2 310 1 320 245 129 14 chr20 37125030 37125169 -35028713 - L2 LINE L2 -183 3089 2935 202 149 0 43 chr20 37125246 37125293 -35028589 + (GGA)n Simple_repeat Simple_repeat 1 45 0 322 290 130 30 chr20 37125557 37125757 -35028125 + L2 LINE L2 2893 3112 -160 1045 200 51 0 chr20 37125838 37126033 -35027849 - AluJb SINE Alu -17 295 91 493 154 0 0 chr20 37126033 37126111 -35027771 + AluJo SINE Alu 70 147 -165 193 161 0 0 chr20 37126115 37126146 -35027736 + L2 LINE L2 3008 3038 -275 828 128 8 0 chr20 37126177 37126294 -35027588 + AluJo/FLAM SINE Alu 1 118 -184 593 107 0 12 chr20 37126294 37126378 -35027504 - AluJb SINE Alu -228 84 2 423 298 53 8 chr20 37126620 37126751 -35027131 - MIR SINE MIR -113 149 13 266 293 172 9 chr20 37126793 37126909 -35026973 - L2 LINE L2 0 3313 3179 282 191 9 130 chr20 37127982 37128097 -35025785 + L2 LINE L2 2943 3043 -229 1707 152 3 25 chr20 37128121 37128404 -35025478 + AluJo SINE Alu 1 277 -35 972 192 12 0 chr20 37128404 37128576 -35025306 - AluJo SINE Alu -138 174 1 2035 127 0 7 chr20 37128598 37128898 -35024984 - AluSx SINE Alu -14 298 1 320 362 17 40 chr20 37128902 37129076 -35024806 + L2 LINE L2 3103 3272 0 597 333 27 0 chr20 37129474 37129660 -35024222 + MIR SINE MIR 51 241 -21 2002 105 0 7 chr20 37130966 37131280 -35022602 - AluSq SINE Alu 0 312 1 1847 144 0 27 chr20 37131282 37131581 -35022301 - AluSx SINE Alu -21 291 1 550 150 0 45 chr20 37131718 37131824 -35022058 - MER31A LTR ERV1 -37 444 340 364 371 77 15 chr20 37131824 37132096 -35021786 - L1MC/D LINE L1 -2213 5595 5307 865 223 57 14 chr20 37132117 37132328 -35021554 - MIR SINE MIR -12 250 31 256 340 42 91 chr20 37132397 37132662 -35021220 - L2 LINE L2 -13 3259 3008 642 185 85 0 chr20 37132700 37132830 -35021052 - MER63D DNA MER1_type -2 1058 918 690 234 0 0 chr20 37132836 37132964 -35020918 + FLAM_A SINE Alu 1 128 -5 267 31 0 0 chr20 37132969 37133001 -35020881 + (GA)n Simple_repeat Simple_repeat 1 32 0 259 133 17 17 chr20 37133022 37133082 -35020800 + GA-rich Low_complexity Low_complexity 1 60 0 2049 199 90 107 chr20 37133084 37133461 -35020421 - MER63D DNA MER1_type -139 922 540 2083 124 10 0 chr20 37133461 37133768 -35020114 + AluSx SINE Alu 3 312 0 2049 199 90 107 chr20 37133768 37133779 -35020103 - MER63D DNA MER1_type -521 540 530 2032 112 34 10 chr20 37133779 37134075 -35019807 + AluSx SINE Alu 1 303 -9 2049 199 90 107 chr20 37134075 37134487 -35019395 - MER63D DNA MER1_type -531 530 4 247 242 121 22 chr20 37134803 37134894 -35018988 + MIR SINE MIR 103 202 -60 909 179 5 65 chr20 37134923 37134981 -35018901 + MER5A DNA MER1_type 1 61 -128 2349 91 0 0 chr20 37134981 37135290 -35018592 - AluSq SINE Alu -3 310 2 909 179 5 65 chr20 37135290 37135432 -35018450 + MER5A DNA MER1_type 61 189 0 398 250 128 18 chr20 37135494 37135658 -35018224 - MER5A DNA MER1_type -1 188 7 385 238 127 16 chr20 37135703 37135829 -35018053 + Charlie8 DNA MER1_type 37 176 -2241 1244 237 4 0 chr20 37136278 37136556 -35017326 - L1ME3 LINE L1 -24 6138 5860 338 290 67 27 chr20 37136569 37136869 -35017013 + L1ME4a LINE L1 5771 6082 -39 278 227 0 0 chr20 37136860 37136926 -35016956 - L1MD3 LINE L1 -8 7987 7922 * 320 119 0 0 chr20 37136927 37136969 -35016913 - AluSp SINE Alu -130 173 132 1897 101 0 86 chr20 37136978 37137157 -35016725 - AluSp SINE Alu -6 307 114 211 28 56 0 chr20 37137157 37137193 -35016689 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2108 81 4 0 chr20 37137193 37137464 -35016418 - AluSp SINE Alu -30 283 12 1897 101 0 86 chr20 37137464 37137619 -35016263 - AluSp SINE Alu -197 116 1 204 40 0 0 chr20 37137686 37137711 -35016171 + (A)n Simple_repeat Simple_repeat 1 25 0 2274 100 0 0 chr20 37137717 37138017 -35015865 + AluSx SINE Alu 1 300 -12 783 259 52 38 chr20 37138194 37138225 -35015657 - MIR SINE MIR -24 238 209 2072 106 7 0 chr20 37138225 37138517 -35015365 - AluSx SINE Alu -18 294 1 783 259 52 38 chr20 37138517 37138729 -35015153 - MIR SINE MIR -53 209 2 218 266 11 85 chr20 37138847 37138864 -35015018 - L2 LINE L2 -558 2756 2739 2329 91 0 0 chr20 37138864 37139173 -35014709 - AluSg SINE Alu -1 309 1 218 266 11 85 chr20 37139173 37139225 -35014657 - L2 LINE L2 -575 2739 2694 384 266 70 70 chr20 37139225 37139424 -35014458 + MIR SINE MIR 2 200 -62 397 190 70 30 chr20 37139424 37139458 -35014424 + L1MC4 LINE L1 6607 6638 -1404 549 0 0 0 chr20 37139458 37139519 -35014363 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 397 190 70 30 chr20 37139519 37139584 -35014298 + L1MC4 LINE L1 6638 6710 -1332 2107 110 3 3 chr20 37140197 37140505 -35013377 - AluSx SINE Alu -4 308 1 211 164 33 16 chr20 37140531 37140592 -35013290 + CT-rich Low_complexity Low_complexity 1 62 0 465 274 114 6 chr20 37140823 37140998 -35012884 - MIR SINE MIR -43 219 26 440 262 140 114 chr20 37141187 37141308 -35012574 + L2 LINE L2 2913 3029 -284 2331 85 0 3 chr20 37141308 37141613 -35012269 - AluSx SINE Alu -5 307 4 440 262 140 114 chr20 37141613 37141737 -35012145 + L2 LINE L2 3029 3148 -165 2031 101 10 3 chr20 37141737 37142034 -35011848 + AluSx SINE Alu 6 304 -8 2293 93 3 3 chr20 37142034 37142344 -35011538 + AluSp SINE Alu 1 310 -3 440 262 140 114 chr20 37142344 37142481 -35011401 + L2 LINE L2 3147 3307 -6 2224 102 3 0 chr20 37142930 37143233 -35010649 + AluSx SINE Alu 5 308 -4 320 266 58 79 chr20 37143237 37143259 -35010623 - MIR SINE MIR -8 254 233 1824 146 7 7 chr20 37143259 37143553 -35010329 - AluSx SINE Alu -18 294 1 320 266 58 79 chr20 37143553 37143669 -35010213 - MIR SINE MIR -29 233 119 472 196 196 31 chr20 37143698 37143861 -35010021 + MIR SINE MIR 16 205 -57 1982 101 7 7 chr20 37143877 37144164 -35009718 - AluSc SINE Alu -20 289 3 729 153 17 0 chr20 37145034 37145152 -35008730 - AluJb SINE Alu -179 133 14 361 176 0 11 chr20 37145156 37145223 -35008659 - Alu SINE Alu -250 51 1 2188 118 0 3 chr20 37145247 37145552 -35008330 + AluSx SINE Alu 1 304 -8 2137 105 0 13 chr20 37145653 37145966 -35007916 - AluSc SINE Alu 0 309 1 1456 185 10 24 chr20 37146147 37146445 -35007437 + AluJo SINE Alu 1 294 -18 2192 119 3 0 chr20 37146458 37146770 -35007112 - AluSp SINE Alu 0 313 1 1000 156 0 17 chr20 37146770 37146943 -35006939 - FRAM SINE Alu -7 169 1 1617 129 16 63 chr20 37147186 37147489 -35006393 + AluJo SINE Alu 1 289 -23 2236 90 3 0 chr20 37147681 37147981 -35005901 - AluSg SINE Alu -9 301 1 1132 122 17 6 chr20 37148288 37148468 -35005414 + AluSq SINE Alu 131 312 -1 1810 155 3 0 chr20 37148507 37148804 -35005078 + AluSx SINE Alu 3 300 -12 620 252 0 0 chr20 37148875 37149006 -35004876 - FLAM_A SINE Alu -2 131 1 251 263 190 36 chr20 37149060 37149197 -35004685 + L2 LINE L2 3156 3313 0 459 248 109 30 chr20 37150083 37150248 -35003634 + MIR SINE MIR 31 207 -36 877 144 98 0 chr20 37150362 37150515 -35003367 - AluSg/x SINE Alu -13 297 130 2328 76 0 3 chr20 37150672 37150976 -35002906 + AluSx SINE Alu 1 303 -9 2265 110 0 0 chr20 37150988 37151298 -35002584 + AluSg SINE Alu 1 310 0 1996 122 0 7 chr20 37151344 37151638 -35002244 - AluSx SINE Alu -17 295 4 257 193 23 23 chr20 37151690 37151778 -35002104 + (TATATG)n Simple_repeat Simple_repeat 4 91 0 810 176 0 0 chr20 37151888 37152013 -35001869 - FRAM SINE Alu -29 147 23 352 191 0 0 chr20 37152022 37152085 -35001797 - L1ME LINE L1 -353 5809 5747 1590 135 61 34 chr20 37152086 37152246 -35001636 - AluSx SINE Alu -7 305 132 2263 72 0 10 chr20 37152246 37152552 -35001330 - AluY SINE Alu -8 303 1 1590 135 61 34 chr20 37152552 37152688 -35001194 - AluSx SINE Alu -180 132 1 33 25 0 0 chr20 37152690 37152730 -35001152 + AT_rich Low_complexity Low_complexity 1 40 0 246 132 0 0 chr20 37152820 37152858 -35001024 + MER112 DNA MER1_type 18 55 -205 1627 154 3 40 chr20 37152895 37153219 -35000663 - AluSx SINE Alu 0 312 1 716 207 83 7 chr20 37153221 37153366 -35000516 - AluJo SINE Alu -8 294 139 1602 75 205 4 chr20 37153367 37153649 -35000233 - AluY SINE Alu 0 301 1 812 161 0 23 chr20 37153663 37153793 -35000089 - AluJo SINE Alu -172 130 4 252 278 0 0 chr20 37153796 37153868 -35000014 + MER112 DNA MER1_type 74 145 -115 2150 100 0 19 chr20 37153868 37154178 -34999704 - AluSg SINE Alu -5 305 2 1610 189 14 3 chr20 37154179 37154476 -34999406 - AluJb SINE Alu -11 301 2 455 271 59 42 chr20 37154478 37154766 -34999116 - L1M4 LINE L1 -1131 5015 4723 2468 63 0 0 chr20 37154808 37155111 -34998771 - AluY SINE Alu -8 303 1 536 305 101 34 chr20 37155122 37155367 -34998515 - L1M4 LINE L1 -1500 4646 4376 2057 113 7 7 chr20 37155367 37155669 -34998213 - AluSx SINE Alu -10 302 1 536 305 101 34 chr20 37155669 37155722 -34998160 - L1M4 LINE L1 -1770 4376 4328 454 231 68 56 chr20 37155723 37155974 -34997908 + L1MC5 LINE L1 7526 7779 -182 635 241 26 119 chr20 37156156 37156575 -34997307 - L1M4 LINE L1 -1896 4250 3871 2306 77 3 0 chr20 37156578 37156888 -34996994 - AluY SINE Alu 0 311 1 1810 138 30 20 chr20 37156987 37157283 -34996599 + AluSg SINE Alu 1 299 -11 2131 121 0 0 chr20 37157313 37157610 -34996272 + AluSx SINE Alu 1 297 -15 1390 168 13 0 chr20 37157618 37157856 -34996026 + AluJo SINE Alu 1 241 -71 1993 162 11 39 chr20 37157856 37157937 -34995945 + LTR28 LTR ERV1 1 83 -553 2213 110 0 0 chr20 37157937 37158246 -34995636 - AluSq SINE Alu -4 309 1 1993 162 11 39 chr20 37158246 37158559 -34995323 + LTR28 LTR ERV1 83 382 -254 446 256 74 8 chr20 37158560 37158681 -34995201 - MIR SINE MIR -103 159 31 189 0 0 0 chr20 37158740 37158761 -34995121 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 180 135 0 0 chr20 37158978 37159015 -34994867 + (TG)n Simple_repeat Simple_repeat 2 38 0 2268 93 0 0 chr20 37159059 37159361 -34994521 - AluSc SINE Alu -7 302 1 1891 122 20 10 chr20 37159462 37159756 -34994126 - AluSq SINE Alu -16 297 1 2400 54 0 10 chr20 37159776 37160089 -34993793 - AluY SINE Alu -1 310 1 339 272 124 43 chr20 37160095 37160352 -34993530 - L1MC3 LINE L1 -32 7753 7476 717 54 0 0 chr20 37160357 37160450 -34993432 + AluY SINE Alu 204 296 -15 307 259 77 33 chr20 37160450 37160983 -34992899 - L1MC5 LINE L1 -481 7491 7064 2161 69 3 20 chr20 37160983 37161289 -34992593 - AluY SINE Alu -10 301 1 307 259 77 33 chr20 37161289 37161594 -34992288 - L1MC5 LINE L1 -908 7064 6774 1874 106 0 0 chr20 37161594 37161850 -34992032 + AluSg SINE Alu 1 256 -54 272 88 0 0 chr20 37161853 37161887 -34991995 + AluSp/q SINE Alu 225 258 -45 615 102 0 0 chr20 37161890 37161978 -34991904 + Alu SINE Alu 222 309 0 328 197 121 15 chr20 37161988 37162083 -34991799 + FRAM SINE Alu 74 175 0 382 279 93 16 chr20 37162106 37162235 -34991647 - L1MC4a LINE L1 -1105 6703 6565 2073 104 10 0 chr20 37162235 37162533 -34991349 - AluSx SINE Alu -11 301 1 242 196 0 0 chr20 37162560 37162606 -34991276 + Alu SINE Alu 256 301 -7 2522 18 0 0 chr20 37162608 37162930 -34990952 + AluYa5 SINE Alu 1 322 0 1907 134 0 3 chr20 37162930 37163252 -34990630 + AluSx SINE Alu 1 321 0 1266 178 89 41 chr20 37163312 37163476 -34990406 + AluSx SINE Alu 1 187 -125 2003 112 0 10 chr20 37163476 37163780 -34990102 - AluY SINE Alu -9 302 2 1266 178 89 41 chr20 37163780 37163907 -34989975 + AluSx SINE Alu 187 306 -6 241 35 0 0 chr20 37163936 37163965 -34989917 - L1MA9 LINE L1 -4 6308 6280 1886 137 0 3 chr20 37163978 37164271 -34989611 - AluSc SINE Alu -17 292 1 1967 113 7 23 chr20 37164459 37164768 -34989114 - AluSq SINE Alu -9 304 1 2093 109 3 3 chr20 37164804 37165106 -34988776 - AluSg SINE Alu -8 302 1 1960 124 0 0 chr20 37165201 37165503 -34988379 - AluSx SINE Alu 0 302 1 1476 181 7 20 chr20 37165529 37165833 -34988049 + AluJb SINE Alu 1 300 -12 741 218 0 0 chr20 37165842 37165975 -34987907 + FLAM_C SINE Alu 1 133 0 39 22 0 0 chr20 37165975 37166021 -34987861 + AT_rich Low_complexity Low_complexity 1 46 0 1842 114 44 11 chr20 37166021 37166322 -34987560 + AluSx SINE Alu 4 313 0 359 151 0 0 chr20 37166327 37166380 -34987502 + AluJb SINE Alu 181 233 -69 1127 147 6 0 chr20 37166380 37166557 -34987325 - AluJo SINE Alu -115 197 20 1784 151 14 3 chr20 37166569 37166853 -34987029 - AluJo SINE Alu -25 287 1 225 0 0 0 chr20 37166943 37166968 -34986914 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2079 113 0 0 chr20 37166972 37167247 -34986635 - AluSx SINE Alu -37 275 1 261 0 0 0 chr20 37167665 37167694 -34986188 + (TG)n Simple_repeat Simple_repeat 2 30 0 626 284 60 5 chr20 37167887 37168105 -34985777 - MIR SINE MIR -2 260 31 906 272 37 50 chr20 37168306 37168462 -34985420 - L2 LINE L2 -52 3261 3104 2400 92 0 3 chr20 37168462 37168765 -34985117 - AluY SINE Alu -9 302 1 906 272 37 50 chr20 37168765 37169175 -34984707 - L2 LINE L2 -209 3104 2697 1964 111 61 4 chr20 37169183 37169462 -34984420 + AluSq SINE Alu 1 295 -18 1114 195 0 37 chr20 37169471 37169686 -34984196 + AluSg/x SINE Alu 85 291 -19 1325 271 45 9 chr20 37169690 37170136 -34983746 - L2 LINE L2 -623 2691 2230 1657 143 12 78 chr20 37170138 37170460 -34983422 + AluJo SINE Alu 1 301 -11 1343 142 30 60 chr20 37170503 37170568 -34983314 - L1MC1 LINE L1 -5 6328 6263 2023 130 3 40 chr20 37170568 37170890 -34982992 + AluJo SINE Alu 1 310 -2 1343 142 30 60 chr20 37170890 37171092 -34982790 - L1MC1 LINE L1 -70 6263 6069 266 197 66 0 chr20 37171199 37171260 -34982622 + MER46A DNA MER2_type 90 154 -82 2312 204 45 73 chr20 37171260 37171335 -34982547 - L1ME1 LINE L1 -37 6129 6053 1661 158 0 95 chr20 37171335 37171671 -34982211 + AluJo SINE Alu 1 304 -8 2312 204 45 73 chr20 37171671 37172255 -34981627 - L1ME1 LINE L1 -113 6053 5488 2719 165 93 48 chr20 37172279 37172343 -34981539 - L1MB7 LINE L1 0 6184 6124 2487 78 0 0 chr20 37172343 37172637 -34981245 + AluSc SINE Alu 1 294 -15 2719 165 93 48 chr20 37172637 37173196 -34980686 - L1MB7 LINE L1 -60 6124 5533 667 188 8 15 chr20 37173205 37173338 -34980544 - FLAM_A SINE Alu -1 132 1 315 231 55 0 chr20 37173352 37173443 -34980439 - L2 LINE L2 -1916 1398 1303 545 163 0 0 chr20 37173489 37173575 -34980307 - AluJ/FLAM SINE Alu -226 86 1 789 253 6 0 chr20 37173672 37173834 -34980048 - FAM SINE Alu -12 163 1 615 262 99 0 chr20 37173859 37174031 -34979851 - L1ME3 LINE L1 -2 6160 5972 2104 99 11 0 chr20 37174077 37174360 -34979522 - AluSq SINE Alu -27 286 1 586 226 77 0 chr20 37174364 37174532 -34979350 - L2 LINE L2 -2088 1226 1046 184 247 37 74 chr20 37174746 37174827 -34979055 - L2 LINE L2 -1 3271 3194 1142 103 0 0 chr20 37175144 37175289 -34978593 - AluSp SINE Alu -39 274 130 2518 63 3 0 chr20 37175519 37175819 -34978063 + AluY SINE Alu 1 301 -10 2301 81 3 3 chr20 37176028 37176340 -34977542 - AluSp SINE Alu 0 312 1 1221 219 165 6 chr20 37176888 37177221 -34976661 - MLT1F LTR MaLR -2 540 155 635 143 0 86 chr20 37177231 37177357 -34976525 - L1MB3 LINE L1 -9 6174 6060 2011 128 26 7 chr20 37177357 37177663 -34976219 - AluSx SINE Alu 0 312 1 635 143 0 86 chr20 37177663 37177676 -34976206 - L1MB3 LINE L1 -123 6060 6047 262 265 0 0 chr20 37177679 37177728 -34976154 - FLAM SINE Alu -17 116 68 710 157 17 0 chr20 37177729 37177844 -34976038 + AluJb SINE Alu 1 117 -195 520 158 0 0 chr20 37177842 37177918 -34975964 - AluJ/FLAM SINE Alu -235 77 2 * 2217 114 3 3 chr20 37177924 37178230 -34975652 - AluSx SINE Alu -6 306 1 2233 155 47 33 chr20 37178232 37178659 -34975223 - L1MB3 LINE L1 -127 6056 5624 1163 100 0 12 chr20 37178734 37178904 -34974978 - L1PA11 LINE L1 0 6174 6007 581 274 110 0 chr20 37178910 37179056 -34974826 - MLT1F LTR MaLR -390 177 16 300 111 0 0 chr20 37179138 37179183 -34974699 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 1483 174 21 39 chr20 37179200 37179481 -34974401 - AluJo SINE Alu -36 276 1 1556 156 93 15 chr20 37179488 37179757 -34974125 - AluJo SINE Alu -22 290 1 187 281 0 31 chr20 37180172 37180236 -34973646 + L2 LINE L2 2976 3037 -235 224 246 169 21 chr20 37180454 37180596 -34973286 - L2 LINE L2 -117 3196 3034 2364 99 0 10 chr20 37180784 37181088 -34972794 + AluSg SINE Alu 1 301 -9 280 261 0 0 chr20 37181100 37181165 -34972717 + L2 LINE L2 3200 3264 -8 2318 92 0 0 chr20 37181794 37182103 -34971779 + AluSg SINE Alu 1 309 0 2407 86 7 0 chr20 37182264 37182567 -34971315 - AluSp SINE Alu -8 305 1 242 257 29 0 chr20 37182718 37182788 -34971094 + L2 LINE L2 3200 3271 -1 2344 86 0 3 chr20 37183011 37183303 -34970579 + AluSc SINE Alu 1 291 -18 386 344 62 42 chr20 37183399 37183666 -34970216 + L1M4 LINE L1 3604 3881 -2265 2206 108 3 3 chr20 37183666 37183977 -34969905 + AluSx SINE Alu 3 313 0 386 344 62 42 chr20 37183977 37184015 -34969867 + L1M4 LINE L1 3881 3917 -2229 1579 182 3 34 chr20 37184038 37184334 -34969548 - AluJo SINE Alu -25 287 1 649 224 29 17 chr20 37184335 37184509 -34969373 - L1MC4a LINE L1 -1859 5949 5774 21 53 0 35 chr20 37184551 37184580 -34969302 + AT_rich Low_complexity Low_complexity 1 29 -26 2416 54 7 10 chr20 37184580 37184878 -34969004 + AluY SINE Alu 2 298 -13 21 53 0 35 chr20 37184878 37184905 -34968977 + AT_rich Low_complexity Low_complexity 29 55 0 1885 150 16 22 chr20 37184905 37185218 -34968664 + AluJb SINE Alu 1 311 -1 22 35 0 0 chr20 37185267 37185296 -34968586 + AT_rich Low_complexity Low_complexity 1 29 0 436 175 0 0 chr20 37185586 37185666 -34968216 - MER116 DNA Mariner 0 80 1 1960 135 3 20 chr20 37186723 37187027 -34966855 + AluJo SINE Alu 1 299 -13 2481 75 0 3 chr20 37187125 37187432 -34966450 + AluY SINE Alu 1 306 -5 233 229 0 0 chr20 37187938 37187986 -34965896 - L2 LINE L2 -4 3309 3262 250 258 77 77 chr20 37188420 37188629 -34965253 - LTR67 LTR ERVL -29 528 320 213 39 0 0 chr20 37188668 37188694 -34965188 + (CAG)n Simple_repeat Simple_repeat 1 26 0 189 185 148 0 chr20 37188695 37188749 -34965133 + MER5A DNA MER1_type 48 109 -80 229 249 91 86 chr20 37188992 37189064 -34964818 - L1MC4a LINE L1 -1814 5994 5924 1536 178 7 51 chr20 37189064 37189357 -34964525 + AluJb SINE Alu 1 280 -32 216 0 0 0 chr20 37189357 37189381 -34964501 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 229 249 91 86 chr20 37189381 37189504 -34964378 - L1MC4a LINE L1 -1883 5925 5797 2300 113 0 0 chr20 37189506 37189815 -34964067 + AluSc SINE Alu 1 309 0 203 273 101 71 chr20 37189961 37190080 -34963802 - MIR SINE MIR -44 218 88 2093 94 25 4 chr20 37190080 37190378 -34963504 + AluSx SINE Alu 1 304 0 203 273 101 71 chr20 37190378 37190455 -34963427 - MIR SINE MIR -174 88 15 1609 97 31 0 chr20 37190924 37191150 -34962732 - AluSg/x SINE Alu -11 299 67 230 180 0 40 chr20 37191153 37191203 -34962679 + L2 LINE L2 3234 3281 -32 2260 105 0 13 chr20 37191254 37191560 -34962322 + AluSg SINE Alu 1 302 -8 1764 154 22 4 chr20 37191607 37191880 -34962002 - AluJb SINE Alu -20 292 15 538 136 12 0 chr20 37192037 37192118 -34961764 - MER51A LTR ERV1 -83 551 470 2129 120 0 0 chr20 37192119 37192418 -34961464 - AluY SINE Alu -12 299 1 186 71 0 0 chr20 37192420 37192448 -34961434 + (T)n Simple_repeat Simple_repeat 1 28 0 432 0 0 0 chr20 37192560 37192608 -34961274 + (CA)n Simple_repeat Simple_repeat 1 48 0 512 252 29 80 chr20 37192905 37193219 -34960663 - L1ME1 LINE L1 -31 6135 5838 792 69 0 52 chr20 37193264 37193380 -34960502 - L1PA3 LINE L1 0 6155 6046 1436 168 12 81 chr20 37193380 37193701 -34960181 - AluJo SINE Alu -13 299 1 1707 170 51 0 chr20 37193787 37194081 -34959801 - AluSx SINE Alu -3 309 1 2038 103 57 0 chr20 37194199 37194480 -34959402 - AluSx SINE Alu -15 297 1 1836 174 135 12 chr20 37194794 37195201 -34958681 - MSTB2 LTR MaLR 0 457 1 1989 125 52 0 chr20 37196279 37196567 -34957315 - AluSg SINE Alu -7 303 1 1752 177 13 13 chr20 37196593 37196892 -34956990 + AluJo SINE Alu 1 299 -13 1329 121 0 11 chr20 37198313 37198503 -34955379 - AluSx SINE Alu 0 312 125 261 0 0 0 chr20 37198602 37198631 -34955251 + (T)n Simple_repeat Simple_repeat 1 29 0 688 141 0 0 chr20 37198974 37199073 -34954809 - AluSx SINE Alu -176 136 38 2199 114 3 7 chr20 37199650 37199948 -34953934 + AluSx SINE Alu 1 297 -15 393 278 65 51 chr20 37199990 37200206 -34953676 - MIR SINE MIR -16 246 28 2329 95 0 0 chr20 37200619 37200913 -34952969 - AluSg SINE Alu -16 294 1 2451 78 7 0 chr20 37200959 37201267 -34952615 + AluSx SINE Alu 3 312 0 772 125 0 0 chr20 37201269 37201381 -34952501 - HY1 scRNA scRNA 0 112 1 1410 174 3 79 chr20 37201479 37201766 -34952116 + AluJo SINE Alu 2 264 -48 2381 99 3 0 chr20 37201766 37202070 -34951812 - AluSx SINE Alu -7 305 1 1410 174 3 79 chr20 37202070 37202098 -34951784 + AluJo SINE Alu 264 293 -19 30 0 0 0 chr20 37203491 37203521 -34950361 + AT_rich Low_complexity Low_complexity 1 30 0 2492 97 37 20 chr20 37203521 37203683 -34950199 - L1MA3 LINE L1 0 6305 6147 2158 128 0 16 chr20 37203683 37203995 -34949887 - AluSx SINE Alu -5 307 1 2492 97 37 20 chr20 37203995 37204233 -34949649 - L1MA3 LINE L1 -158 6147 5898 860 199 27 11 chr20 37204345 37204531 -34949351 - MER5A DNA MER1_type 0 189 1 2206 82 3 20 chr20 37205585 37205888 -34947994 - AluSg SINE Alu 0 310 13 2254 115 0 7 chr20 37206585 37206889 -34946993 - AluSx SINE Alu -10 302 1 2012 129 10 10 chr20 37207558 37207861 -34946021 - AluSx SINE Alu -9 303 1 1947 136 14 0 chr20 37207947 37208233 -34945649 - AluSx SINE Alu -22 290 1 2239 121 0 7 chr20 37208254 37208559 -34945323 - AluSx SINE Alu -9 303 1 460 240 111 80 chr20 37209253 37209777 -34944105 - L1ME4a LINE L1 -21 6100 5514 203 283 124 18 chr20 37209912 37210025 -34943857 - L2 LINE L2 -35 3278 3154 1921 156 3 19 chr20 37210462 37210770 -34943112 + AluJo SINE Alu 1 303 -9 336 264 40 24 chr20 37212157 37212282 -34941600 - Charlie2a DNA MER1_type 0 2862 2736 698 200 0 0 chr20 37212306 37212421 -34941461 + FLAM_A SINE Alu 1 115 -18 405 0 0 0 chr20 37212424 37212469 -34941413 + (CA)n Simple_repeat Simple_repeat 2 46 0 402 236 132 22 chr20 37212470 37212652 -34941230 - Charlie2a DNA MER1_type -1213 1649 1448 846 165 47 12 chr20 37212764 37212934 -34940948 + MER33 DNA MER1_type 1 170 -88 1825 102 0 28 chr20 37212940 37213195 -34940687 + AluSq SINE Alu 21 268 -45 1302 156 5 14 chr20 37213232 37213443 -34940439 + AluJo SINE Alu 1 209 -103 24 0 0 0 chr20 37213443 37213467 -34940415 + AT_rich Low_complexity Low_complexity 1 24 0 1908 153 20 3 chr20 37213514 37213815 -34940067 - AluJb SINE Alu -5 307 2 514 77 0 0 chr20 37213878 37213943 -34939939 + AluSq/x SINE Alu 71 135 -178 2126 119 0 3 chr20 37213943 37214259 -34939623 + AluSx SINE Alu 1 315 0 604 187 205 6 chr20 37214320 37214486 -34939396 + MER105 DNA DNA 5 203 -1 598 220 45 141 chr20 37214490 37214781 -34939101 - Charlie2 DNA MER1_type -2584 278 16 209 333 51 22 chr20 37214933 37215071 -34938811 + MER5A DNA MER1_type 47 188 -1 2178 122 0 3 chr20 37215281 37215577 -34938305 - AluSx SINE Alu -17 295 1 183 209 19 38 chr20 37215777 37215882 -34938000 + CT-rich Low_complexity Low_complexity 5 107 0 2326 93 3 0 chr20 37216028 37216318 -34937564 + AluSp SINE Alu 1 291 -22 1946 117 14 31 chr20 37216336 37216626 -34937256 + AluSx SINE Alu 2 286 -26 264 59 0 0 chr20 37216626 37216660 -34937222 + (CAAG)n Simple_repeat Simple_repeat 2 35 0 2109 122 0 0 chr20 37216825 37217119 -34936763 + AluSx SINE Alu 1 294 -18 25 51 0 0 chr20 37217360 37217399 -34936483 + AT_rich Low_complexity Low_complexity 1 39 0 2151 122 0 40 chr20 37217894 37218039 -34935843 + AluSx SINE Alu 1 150 -162 2562 74 0 0 chr20 37218039 37218348 -34935534 + AluY SINE Alu 1 309 -2 2151 122 0 40 chr20 37218348 37218523 -34935359 + AluSx SINE Alu 150 308 -4 24 0 0 0 chr20 37218574 37218598 -34935284 + AT_rich Low_complexity Low_complexity 1 24 0 2047 210 107 61 chr20 37219954 37220257 -34933625 - L1MDa LINE L1 -2793 3747 3459 2222 112 0 0 chr20 37220257 37220553 -34933329 + AluSx SINE Alu 1 296 -16 2047 210 107 61 chr20 37220553 37221122 -34932760 - L1MDa LINE L1 -3081 3459 2835 2116 132 3 0 chr20 37221122 37221417 -34932465 - AluSx SINE Alu -16 296 1 526 243 148 67 chr20 37221417 37221475 -34932407 - L1MDa LINE L1 -4001 2539 2487 1710 97 0 4 chr20 37221475 37221703 -34932179 - AluSg/x SINE Alu -2 310 84 526 243 148 67 chr20 37221703 37221984 -34931898 - L1MDa LINE L1 -4053 2487 2230 2133 117 3 29 chr20 37221984 37222292 -34931590 - AluSq SINE Alu -13 300 1 526 243 148 67 chr20 37222292 37222496 -34931386 - L1MDa LINE L1 -4310 2230 1945 1156 151 0 0 chr20 37222506 37222672 -34931210 - AluJb SINE Alu -18 294 129 1373 165 15 53 chr20 37222846 37223112 -34930770 + AluJb SINE Alu 27 282 -30 2331 110 0 0 chr20 37223132 37223433 -34930449 + AluSx SINE Alu 1 301 -11 2356 86 3 7 chr20 37224305 37224606 -34929276 + AluSx SINE Alu 1 300 -12 2115 87 35 45 chr20 37224705 37224841 -34929041 + AluSq SINE Alu 1 137 -176 2614 56 0 3 chr20 37224841 37225147 -34928735 + AluY SINE Alu 1 305 -6 2115 87 35 45 chr20 37225147 37225320 -34928562 + AluSq SINE Alu 137 307 -6 935 104 15 0 chr20 37225456 37225591 -34928291 - AluSg/x SINE Alu 0 312 176 661 163 8 8 chr20 37225593 37225716 -34928166 - FRAM SINE Alu -12 164 42 380 89 0 0 chr20 37227758 37227814 -34926068 + AluJb SINE Alu 78 133 -169 809 204 28 22 chr20 37227853 37228034 -34925848 + AluJb SINE Alu 131 312 0 426 186 87 116 chr20 37228547 37228699 -34925183 - L1MD3 LINE L1 0 8042 7887 2164 124 3 7 chr20 37228699 37228997 -34924885 + AluSx SINE Alu 5 301 -11 426 186 87 116 chr20 37228997 37229065 -34924817 - L1MD3 LINE L1 -155 7887 7839 2400 87 0 10 chr20 37229065 37229374 -34924508 - AluSx SINE Alu -6 306 1 426 186 87 116 chr20 37229374 37229395 -34924487 - L1MD3 LINE L1 -203 7839 7819 1384 105 0 0 chr20 37229406 37229587 -34924295 + AluSg/x SINE Alu 132 312 0 417 100 0 0 chr20 37229594 37229654 -34924228 - L1MC4 LINE L1 -211 7831 7772 190 206 237 0 chr20 37229864 37229967 -34923915 + L2 LINE L2 2783 2907 -365 1603 175 46 0 chr20 37230452 37230732 -34923150 - AluJo SINE Alu -19 293 1 2211 131 0 3 chr20 37230761 37231073 -34922809 + AluSx SINE Alu 1 311 -1 1043 169 0 6 chr20 37231079 37231251 -34922631 + FRAM SINE Alu 1 166 -10 372 206 11 22 chr20 37231258 37231350 -34922532 - L1ME LINE L1 -314 5807 5717 1794 167 3 14 chr20 37231464 37231758 -34922124 - AluJb SINE Alu -21 291 1 1288 173 132 103 chr20 37232711 37232844 -34921038 - L1MC4 LINE L1 -11 8031 7903 2235 121 0 10 chr20 37232844 37233150 -34920732 - AluSx SINE Alu -9 303 1 1288 173 132 103 chr20 37233150 37233457 -34920425 - L1MC4 LINE L1 -139 7903 7589 306 50 0 0 chr20 37233484 37233524 -34920358 + (T)n Simple_repeat Simple_repeat 1 40 0 2527 182 59 22 chr20 37233531 37234123 -34919759 - L1MC4 LINE L1 -440 7602 6989 1988 112 52 7 chr20 37234156 37234442 -34919440 - AluSx SINE Alu -13 299 1 1641 227 141 70 chr20 37235260 37235675 -34918207 - MLT1E LTR MaLR -8 585 120 834 131 14 21 chr20 37235675 37235820 -34918062 + U4 snRNA snRNA 1 144 -1 1641 227 141 70 chr20 37235820 37235950 -34917932 - MLT1E LTR MaLR -473 120 1 2400 86 3 3 chr20 37235994 37236297 -34917585 - AluSp SINE Alu -10 303 1 762 120 0 17 chr20 37236655 37236772 -34917110 + FLAM_C SINE Alu 3 117 -16 28 0 0 0 chr20 37236772 37236800 -34917082 + AT_rich Low_complexity Low_complexity 1 28 0 2211 128 3 0 chr20 37237022 37237328 -34916554 - AluSg SINE Alu -1 309 3 2175 138 0 3 chr20 37237368 37237679 -34916203 - AluSx SINE Alu -2 310 1 30 0 0 0 chr20 37237727 37237757 -34916125 + AT_rich Low_complexity Low_complexity 1 30 0 1123 161 6 11 chr20 37237757 37237937 -34915945 - AluSg/x SINE Alu -25 285 107 2248 52 45 7 chr20 37238558 37238844 -34915038 - AluY SINE Alu -14 297 1 484 210 266 0 chr20 37239613 37239756 -34914126 - MER5A DNA MER1_type 0 189 9 2283 107 3 0 chr20 37239948 37240248 -34913634 + AluSg SINE Alu 1 301 -9 1716 176 14 0 chr20 37240304 37240582 -34913300 - AluJb SINE Alu -30 282 1 412 217 100 0 chr20 37241234 37241354 -34912528 + MIR3 SINE MIR 52 183 -25 1367 142 81 38 chr20 37242011 37242272 -34911610 + AluJo SINE Alu 5 276 -36 1357 165 0 13 chr20 37242544 37242774 -34911108 - AluSg/x SINE Alu -1 311 85 2272 100 0 10 chr20 37242944 37243245 -34910637 + AluSq SINE Alu 4 301 -12 2110 136 0 3 chr20 37243500 37243808 -34910074 - AluSg SINE Alu -3 307 1 2276 99 13 3 chr20 37243991 37244294 -34909588 - AluSx SINE Alu -6 306 1 321 267 117 8 chr20 37244446 37244566 -34909316 - MIR SINE MIR -111 151 19 2431 91 0 3 chr20 37244691 37244999 -34908883 - AluY SINE Alu -4 307 1 2339 105 0 6 chr20 37245008 37245322 -34908560 - AluSx SINE Alu 0 312 1 2139 108 14 0 chr20 37245323 37245609 -34908273 - AluSx SINE Alu -8 304 15 1898 128 75 0 chr20 37245613 37245894 -34907988 - AluSg SINE Alu -8 302 1 976 181 46 42 chr20 37246003 37246136 -34907746 - L1MB3 LINE L1 -9 6174 6038 2068 134 0 10 chr20 37246136 37246435 -34907447 + AluSx SINE Alu 1 296 -16 976 181 46 42 chr20 37246435 37246539 -34907343 - L1MB3 LINE L1 -145 6038 5936 1988 138 26 7 chr20 37246747 37247052 -34906830 - AluSx SINE Alu -1 311 1 190 108 54 0 chr20 37247243 37247280 -34906602 + MIR SINE MIR 95 133 -129 1827 167 6 22 chr20 37247385 37247702 -34906180 + AluJo SINE Alu 1 312 0 1625 164 0 36 chr20 37247892 37248173 -34905709 - AluJo SINE Alu -15 297 27 2418 71 0 10 chr20 37248173 37248468 -34905414 + AluSp SINE Alu 1 292 -21 258 146 24 0 chr20 37248473 37248514 -34905368 - AluJo SINE Alu -266 42 1 2347 92 0 0 chr20 37248531 37248825 -34905057 - AluSg SINE Alu -16 294 1 2177 139 0 0 chr20 37248907 37249210 -34904672 - AluSx SINE Alu -9 303 1 234 260 38 29 chr20 37249225 37249242 -34904640 + MIR SINE MIR 2 17 -191 1764 169 3 3 chr20 37249242 37249537 -34904345 + AluJb SINE Alu 1 295 -17 234 260 38 29 chr20 37249537 37249624 -34904258 + MIR SINE MIR 17 106 -102 2231 115 0 0 chr20 37249788 37250093 -34903789 - AluSq SINE Alu -8 305 1 2032 89 107 4 chr20 37250254 37250535 -34903347 + AluSg SINE Alu 1 310 0 2200 88 0 14 chr20 37250580 37250884 -34902998 + AluSc SINE Alu 1 300 0 2018 120 3 3 chr20 37250895 37251178 -34902704 + AluSc SINE Alu 1 283 -26 1832 139 0 93 chr20 37251462 37251632 -34902250 - AluJo SINE Alu -11 301 117 342 0 0 0 chr20 37251632 37251670 -34902212 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2169 103 4 0 chr20 37251671 37251952 -34901930 - AluSp SINE Alu -31 282 1 1958 110 55 0 chr20 37251954 37252244 -34901638 - AluSg SINE Alu -4 306 1 2089 113 10 7 chr20 37252246 37252547 -34901335 - AluSx SINE Alu -4 308 7 1832 139 0 93 chr20 37252547 37252558 -34901324 - AluJo SINE Alu -197 115 105 2448 60 0 0 chr20 37252558 37252869 -34901013 - AluY SINE Alu 0 311 1 1832 139 0 93 chr20 37252869 37253009 -34900873 - AluJo SINE Alu -207 105 1 2074 118 10 0 chr20 37253060 37253348 -34900534 - AluSx SINE Alu -21 291 1 216 150 133 50 chr20 37253356 37253416 -34900466 - L2 LINE L2 -6 3266 3202 2031 101 16 57 chr20 37253607 37253923 -34899959 + AluSx SINE Alu 1 303 -9 2171 121 0 3 chr20 37254012 37254319 -34899563 - AluSg SINE Alu -4 306 1 1910 135 0 7 chr20 37254337 37254619 -34899263 - AluSq SINE Alu -22 291 12 1939 131 30 7 chr20 37254712 37255017 -34898865 - AluSx SINE Alu 0 312 1 1613 161 0 60 chr20 37255165 37255301 -34898581 + AluJo SINE Alu 1 111 -201 2271 100 3 0 chr20 37255301 37255602 -34898280 + AluY SINE Alu 1 302 -9 1613 161 0 60 chr20 37255602 37255763 -34898119 + AluJo SINE Alu 111 280 -32 2057 120 20 20 chr20 37255763 37256064 -34897818 - AluSq SINE Alu -12 301 1 2256 64 0 0 chr20 37256260 37256527 -34897355 + AluY SINE Alu 34 300 -11 2272 112 0 0 chr20 37257379 37257675 -34896207 + AluSc SINE Alu 1 296 -13 2067 103 0 85 chr20 37258306 37258444 -34895438 + AluSq SINE Alu 1 149 -164 2297 88 3 0 chr20 37258444 37258729 -34895153 + AluSp SINE Alu 1 286 -27 180 0 0 0 chr20 37258735 37258755 -34895127 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2067 103 0 85 chr20 37258755 37258940 -34894942 + AluSq SINE Alu 154 303 -10 518 319 49 0 chr20 37258992 37259177 -34894705 - MIR SINE MIR -49 213 20 235 213 280 0 chr20 37259809 37259884 -34893998 - MIR SINE MIR -162 100 5 268 237 10 93 chr20 37259894 37259991 -34893891 - MIR SINE MIR -100 108 20 412 299 213 5 chr20 37261548 37261759 -34892123 + MIR SINE MIR 8 262 0 226 283 0 0 chr20 37261924 37261970 -34891912 - L2 LINE L2 -18 3254 3209 1663 124 7 51 chr20 37262946 37263091 -34890791 - AluSg SINE Alu -48 262 133 2203 102 0 7 chr20 37263091 37263386 -34890496 + AluSg SINE Alu 1 293 -17 1663 124 7 51 chr20 37263386 37263514 -34890368 - AluSg SINE Alu -177 133 1 1698 137 100 0 chr20 37264273 37264543 -34889339 + AluSx SINE Alu 1 297 -15 25 0 0 0 chr20 37264849 37264874 -34889008 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr20 37267018 37267053 -34886829 + AT_rich Low_complexity Low_complexity 1 35 0 1822 150 39 0 chr20 37267135 37267421 -34886461 + AluSq SINE Alu 1 297 -16 979 118 0 15 chr20 37267539 37267675 -34886207 + AluSq/x SINE Alu 1 134 -179 1605 160 49 31 chr20 37267676 37267964 -34885918 + AluSx SINE Alu 1 293 -19 2484 87 3 0 chr20 37268365 37268677 -34885205 + AluSp SINE Alu 1 313 0 26 30 0 0 chr20 37269793 37269826 -34884056 + AT_rich Low_complexity Low_complexity 1 33 0 770 178 302 0 chr20 37273483 37273652 -34880230 + AluSg SINE Alu 1 220 -90 1726 126 134 11 chr20 37273806 37274075 -34879807 + AluSx SINE Alu 1 302 0 21 57 0 0 chr20 37274302 37274337 -34879545 + AT_rich Low_complexity Low_complexity 1 35 0 837 194 5 164 chr20 37274821 37274937 -34878945 + AluSp SINE Alu 1 134 -179 2061 105 3 49 chr20 37274937 37275243 -34878639 - AluSp SINE Alu -20 293 2 837 194 5 164 chr20 37275243 37275264 -34878618 + AluSp SINE Alu 134 157 -156 180 0 0 0 chr20 37275264 37275284 -34878598 + (CCAA)n Simple_repeat Simple_repeat 1 20 0 837 194 5 164 chr20 37275284 37275512 -34878370 + AluSp SINE Alu 157 309 -4 28 61 0 0 chr20 37276045 37276094 -34877788 + AT_rich Low_complexity Low_complexity 1 49 0 495 157 0 0 chr20 37276289 37276359 -34877523 + AluS SINE Alu 2 71 -242 1541 148 12 4 chr20 37276852 37277095 -34876787 - AluSq SINE Alu -68 245 1 1032 219 146 54 chr20 37277320 37277689 -34876193 + MSTB LTR MaLR 1 403 -23 2116 118 0 26 chr20 37277689 37277993 -34875889 - AluSx SINE Alu -16 296 1 350 181 96 0 chr20 37278094 37278177 -34875705 + U13 snRNA snRNA 5 95 -9 565 238 40 8 chr20 37278201 37278327 -34875555 + AluJo SINE Alu 1 130 -172 2019 154 0 0 chr20 37278617 37278929 -34874953 + AluSx SINE Alu 1 312 0 300 200 35 59 chr20 37279179 37279264 -34874618 + L1MB8 LINE L1 6058 6140 -38 577 219 60 20 chr20 37279327 37279478 -34874404 + AluJo SINE Alu 136 292 -20 2409 68 0 3 chr20 37279483 37279778 -34874104 - AluY SINE Alu -17 294 1 183 42 0 0 chr20 37279887 37279911 -34873971 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1292 172 93 7 chr20 37280024 37280149 -34873733 + AluSx SINE Alu 1 114 -198 2295 101 3 7 chr20 37280149 37280456 -34873426 + AluSp SINE Alu 1 306 -7 1292 172 93 7 chr20 37280456 37280609 -34873273 + AluSx SINE Alu 114 303 -9 1265 142 0 10 chr20 37280754 37280951 -34872931 - AluSx SINE Alu -117 195 1 271 146 21 0 chr20 37280989 37281037 -34872845 + MER58B DNA MER1_type 250 298 -43 1637 126 96 4 chr20 37281041 37281302 -34872580 + AluSq SINE Alu 3 287 -26 21 0 0 0 chr20 37281336 37281357 -34872525 + AT_rich Low_complexity Low_complexity 1 21 0 1714 152 55 14 chr20 37281417 37281706 -34872176 - AluSx SINE Alu -11 301 1 22 35 0 0 chr20 37281710 37281739 -34872143 + AT_rich Low_complexity Low_complexity 1 29 0 1717 161 14 7 chr20 37282111 37282396 -34871486 + AluSx SINE Alu 1 287 -25 1608 128 31 31 chr20 37282596 37282854 -34871028 - AluSc SINE Alu -51 258 1 858 205 12 0 chr20 37282950 37283111 -34870771 - FRAM SINE Alu -17 159 1 274 271 74 16 chr20 37283618 37283740 -34870142 + L1MB4 LINE L1 5900 6028 -152 2183 129 0 0 chr20 37283745 37284056 -34869826 + AluY SINE Alu 1 311 0 559 205 8 39 chr20 37284078 37284205 -34869677 - FLAM_A SINE Alu -9 133 11 2461 73 0 3 chr20 37284271 37284574 -34869308 + AluY SINE Alu 1 302 -9 2208 105 3 3 chr20 37285062 37285357 -34868525 - AluSq SINE Alu -18 295 1 1433 212 0 4 chr20 37285402 37285666 -34868216 + AluJb SINE Alu 25 287 -25 2106 122 20 0 chr20 37285669 37285965 -34867917 + AluSq SINE Alu 1 302 -11 25 0 0 0 chr20 37286427 37286452 -34867430 + AT_rich Low_complexity Low_complexity 1 25 0 25 75 0 0 chr20 37286791 37286844 -34867038 + AT_rich Low_complexity Low_complexity 1 53 0 724 152 9 0 chr20 37286851 37286963 -34866919 - L1PB2 LINE L1 -6 6145 6033 442 261 0 0 chr20 37286999 37287087 -34866795 - FLAM_A SINE Alu -23 119 32 836 124 0 0 chr20 37287087 37287200 -34866682 - AluSq/x SINE Alu -200 113 1 2179 116 0 6 chr20 37287272 37287583 -34866299 - AluSq SINE Alu -4 309 1 2168 119 7 0 chr20 37287747 37288050 -34865832 - AluY SINE Alu -6 305 1 1520 130 13 9 chr20 37288450 37288681 -34865201 - AluSg/x SINE Alu -15 297 66 1155 199 11 33 chr20 37288724 37288995 -34864887 + AluJo SINE Alu 44 308 -4 1993 113 7 20 chr20 37289106 37289262 -34864620 - AluSc SINE Alu -21 288 136 2387 65 10 16 chr20 37289262 37289571 -34864311 - AluSq SINE Alu -6 307 1 1993 113 7 20 chr20 37289571 37289706 -34864176 - AluSc SINE Alu -173 136 1 483 153 145 15 chr20 37289924 37290055 -34863827 + L1MA5 LINE L1 6151 6298 -2 2198 104 0 0 chr20 37290116 37290405 -34863477 + AluSg SINE Alu 1 289 -21 1753 171 7 0 chr20 37290415 37290730 -34863152 + AluSx SINE Alu 1 317 0 261 249 52 75 chr20 37291440 37291613 -34862269 - L1ME4a LINE L1 -23 6098 5930 230 240 91 50 chr20 37292600 37292721 -34861161 - MIR SINE MIR -47 215 90 1982 113 0 4 chr20 37293916 37294182 -34859700 + AluSg SINE Alu 22 286 -24 2097 130 3 0 chr20 37294641 37294940 -34858942 + AluSq SINE Alu 1 300 -13 1976 145 7 3 chr20 37294947 37295251 -34858631 + AluSx SINE Alu 3 307 -5 2330 88 0 7 chr20 37298274 37298570 -34855312 - AluSc SINE Alu -15 294 1 1987 115 7 11 chr20 37298608 37298729 -34855153 + AluSq SINE Alu 13 133 -180 2197 120 0 0 chr20 37298729 37299030 -34854852 + AluSg SINE Alu 1 301 -9 1987 115 7 11 chr20 37299030 37299194 -34854688 + AluSq SINE Alu 133 297 -16 2206 93 45 0 chr20 37299200 37299491 -34854391 + AluY SINE Alu 1 304 -7 1911 126 3 13 chr20 37299491 37299792 -34854090 + AluY SINE Alu 1 298 -13 809 113 0 0 chr20 37299793 37299908 -34853974 + AluSg/x SINE Alu 186 300 -9 2445 78 3 0 chr20 37302644 37302953 -34850929 - AluSq SINE Alu -3 310 1 291 140 0 0 chr20 37303607 37303657 -34850225 + (CTG)n Simple_repeat Simple_repeat 1 50 0 254 259 113 67 chr20 37304874 37305029 -34848853 + MIR3 SINE MIR 6 150 -58 200 255 0 0 chr20 37305145 37305192 -34848690 + MIR SINE MIR 168 214 -48 2015 115 33 10 chr20 37305424 37305728 -34848154 + AluSx SINE Alu 1 311 -1 1791 161 3 17 chr20 37306099 37306397 -34847485 + AluJo SINE Alu 3 296 -16 23 0 0 0 chr20 37306595 37306618 -34847264 + AT_rich Low_complexity Low_complexity 1 23 0 860 194 0 18 chr20 37306714 37306879 -34847003 - FRAM SINE Alu -22 154 1 2180 123 3 0 chr20 37306892 37307184 -34846698 + AluSp SINE Alu 1 293 -20 528 135 19 29 chr20 37307191 37307295 -34846587 - L1MA4 LINE L1 -26 6274 6172 635 72 0 0 chr20 37307295 37307378 -34846504 - AluSp/q SINE Alu -6 307 225 279 203 0 0 chr20 37307396 37307455 -34846427 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 2300 98 0 3 chr20 37307456 37307753 -34846129 - AluSx SINE Alu -16 296 1 1697 182 10 0 chr20 37307753 37308044 -34845838 - AluJb SINE Alu -18 294 1 306 169 33 127 chr20 37308307 37308414 -34845468 - FRAM SINE Alu -14 152 70 2188 106 24 0 chr20 37308428 37308721 -34845161 - AluSx SINE Alu -12 300 1 1896 132 3 24 chr20 37308730 37309026 -34844856 - AluSx SINE Alu -22 290 1 1640 178 28 0 chr20 37309029 37309316 -34844566 - AluSx SINE Alu -16 296 2 2270 87 7 3 chr20 37309345 37309643 -34844239 + AluSx SINE Alu 1 299 -13 2359 84 0 3 chr20 37309985 37310281 -34843601 + AluY SINE Alu 1 295 -16 1877 150 30 3 chr20 37310392 37310692 -34843190 + AluSg SINE Alu 1 308 -2 794 156 8 0 chr20 37310860 37310982 -34842900 + AluJo/FLAM SINE Alu 1 123 -179 1436 196 11 11 chr20 37310982 37311263 -34842619 - AluJo SINE Alu -31 281 1 2353 79 23 0 chr20 37311356 37311660 -34842222 - AluSq SINE Alu -2 311 1 305 246 22 1 chr20 37312052 37312145 -34841737 - L1ME2 LINE L1 -1 6163 6073 674 198 0 0 chr20 37312683 37312794 -34841088 + FLAM_A SINE Alu 10 120 -22 2249 112 0 0 chr20 37312906 37313210 -34840672 + AluSg SINE Alu 2 305 -5 3118 158 12 49 chr20 37313223 37313403 -34840479 + L1MB5 LINE L1 5499 5684 -490 2038 129 24 0 chr20 37313403 37313690 -34840192 + AluSx SINE Alu 1 294 -18 3118 158 12 49 chr20 37313690 37313995 -34839887 + L1MB5 LINE L1 5684 5961 -213 2280 104 0 0 chr20 37313995 37314294 -34839588 + AluY SINE Alu 1 299 -12 3118 158 12 49 chr20 37314294 37314400 -34839482 + L1MB5 LINE L1 5961 6069 -105 518 123 61 61 chr20 37315378 37315492 -34838390 + L1MB5 LINE L1 6061 6174 0 668 203 8 17 chr20 37315499 37315617 -34838265 + AluJo SINE Alu 1 117 -185 1227 195 43 28 chr20 37315641 37315923 -34837959 - AluJo SINE Alu -26 286 1 860 235 0 0 chr20 37315951 37316138 -34837744 + AluJo SINE Alu 118 304 -8 2221 102 14 0 chr20 37316231 37316524 -34837358 + AluSg SINE Alu 1 297 -13 2305 97 3 7 chr20 37316564 37316873 -34837009 - AluSx SINE Alu 0 312 5 229 65 0 0 chr20 37316954 37317000 -34836882 - LTR66 LTR ERVL -171 439 394 488 168 11 17 chr20 37317000 37317157 -34836725 + (TA)n Simple_repeat Simple_repeat 1 159 -18 2131 97 3 14 chr20 37317157 37317446 -34836436 - AluSg1 SINE Alu -23 286 1 488 168 11 17 chr20 37317446 37317465 -34836417 + (TA)n Simple_repeat Simple_repeat 159 177 0 401 179 18 89 chr20 37317473 37317585 -34836297 - L2 LINE L2 -30 3283 3180 1926 148 20 7 chr20 37317613 37317911 -34835971 + AluSx SINE Alu 1 302 -10 378 190 0 6 chr20 37317981 37318062 -34835820 + AluS SINE Alu 1 62 -238 183 42 0 0 chr20 37318064 37318088 -34835794 + (A)n Simple_repeat Simple_repeat 1 24 0 273 371 29 7 chr20 37318088 37318228 -34835654 - L2 LINE L2 -264 3008 2866 2073 115 4 0 chr20 37318307 37318585 -34835297 - AluSg SINE Alu -31 279 1 789 177 39 0 chr20 37318585 37318715 -34835167 - AluJo SINE Alu -176 136 2 1583 207 123 10 chr20 37318717 37319123 -34834759 + LTR50 LTR ERVL 344 795 0 229 343 99 29 chr20 37319376 37319618 -34834264 + MIR SINE MIR 1 259 -3 2047 93 4 4 chr20 37319618 37319922 -34833960 + AluSg SINE Alu 1 304 0 1786 118 3 59 chr20 37319922 37320245 -34833637 + Tigger1 DNA MER2_type 1167 1471 -947 1828 140 3 11 chr20 37320246 37320575 -34833307 - AluSx SINE Alu 0 327 1 551 194 0 11 chr20 37320596 37320689 -34833193 - FLAM_C SINE Alu -17 126 35 2065 135 6 0 chr20 37320760 37321071 -34832811 + AluSq SINE Alu 1 313 0 989 119 0 0 chr20 37321089 37321223 -34832659 + AluSq/x SINE Alu 1 134 -178 1989 117 7 19 chr20 37321226 37321534 -34832348 + AluSq SINE Alu 1 304 -9 909 169 26 0 chr20 37321574 37321728 -34832154 - FRAM SINE Alu -23 153 1 1824 136 31 17 chr20 37321735 37322029 -34831853 - AluSg SINE Alu -12 298 1 412 205 9 71 chr20 37322065 37322177 -34831705 - L1MC4a LINE L1 -311 5810 5722 782 124 0 9 chr20 37322177 37322290 -34831592 + AluJ SINE Alu 21 132 -180 1705 182 0 7 chr20 37322290 37322597 -34831285 + AluJb SINE Alu 1 305 -7 23 0 0 0 chr20 37322597 37322620 -34831262 + AT_rich Low_complexity Low_complexity 1 23 0 879 196 21 11 chr20 37322620 37322809 -34831073 + AluJ SINE Alu 121 311 -1 22 70 0 0 chr20 37322880 37322923 -34830959 + AT_rich Low_complexity Low_complexity 1 43 0 1492 123 176 23 chr20 37323002 37323138 -34830744 + AluY SINE Alu 1 115 -186 1870 96 81 0 chr20 37323138 37323409 -34830473 + AluSc SINE Alu 1 293 -16 1492 123 176 23 chr20 37323409 37323533 -34830349 + AluY SINE Alu 115 301 0 1822 140 3 17 chr20 37323855 37324148 -34829734 + AluSp SINE Alu 24 312 -1 2048 110 0 25 chr20 37324538 37324856 -34829026 - AluSg SINE Alu 0 310 1 22 0 0 0 chr20 37324998 37325020 -34828862 + AT_rich Low_complexity Low_complexity 1 22 0 2097 117 3 19 chr20 37325020 37325337 -34828545 + AluSx SINE Alu 1 312 0 2417 67 0 13 chr20 37325376 37325689 -34828193 - AluSc SINE Alu 0 309 1 1861 132 21 11 chr20 37325720 37326033 -34827849 + AluSp SINE Alu 3 313 0 977 170 0 0 chr20 37326033 37326192 -34827690 + AluSq SINE Alu 134 292 -21 1799 128 82 0 chr20 37326236 37326518 -34827364 - AluSg SINE Alu -5 305 1 900 123 14 0 chr20 37326518 37326656 -34827226 - AluSq/x SINE Alu -168 145 6 1643 170 42 0 chr20 37326755 37327038 -34826844 + AluSg SINE Alu 1 295 -15 1828 147 0 11 chr20 37327042 37327392 -34826490 + AluSg SINE Alu 1 347 0 950 112 0 30 chr20 37327396 37327530 -34826352 + FLAM_C SINE Alu 1 130 -3 295 375 31 0 chr20 37327660 37327788 -34826094 - L2 LINE L2 -4 3268 3137 1304 125 54 131 chr20 37327818 37328153 -34825729 + AluYb8 SINE Alu 1 309 -9 2261 82 3 0 chr20 37328157 37328449 -34825433 + AluY SINE Alu 1 293 -18 336 283 71 18 chr20 37328452 37328565 -34825317 + L1MC4a LINE L1 5867 5985 -1823 935 149 0 0 chr20 37328565 37328706 -34825176 + FRAM SINE Alu 9 149 -27 1671 126 8 0 chr20 37329046 37329300 -34824582 - AluSx SINE Alu -56 256 1 2144 103 3 10 chr20 37329308 37329608 -34824274 - AluSx SINE Alu -14 298 1 225 362 123 7 chr20 37331051 37331189 -34822693 + L2 LINE L2 3118 3271 -1 369 208 0 13 chr20 37331404 37331481 -34822401 - U6 snRNA snRNA 0 107 32 2115 106 0 0 chr20 37331481 37331791 -34822091 - AluSx SINE Alu 0 310 1 864 158 0 0 chr20 37331957 37332090 -34821792 + AluJo SINE Alu 1 133 -169 2206 87 0 13 chr20 37332096 37332396 -34821486 + AluSg1 SINE Alu 1 296 -13 1544 170 30 4 chr20 37332413 37332678 -34821204 + AluJb SINE Alu 26 297 -15 318 196 0 0 chr20 37332678 37332729 -34821153 + AluJo SINE Alu 134 184 -118 1091 139 0 6 chr20 37332729 37332901 -34820981 - AluJo SINE Alu -141 171 1 309 330 192 19 chr20 37333008 37333326 -34820556 - L2 LINE L2 -358 2956 2584 223 173 40 27 chr20 37333709 37333784 -34820098 + (CCGGG)n Simple_repeat Simple_repeat 4 79 0 21 89 0 0 chr20 37333955 37334011 -34819871 + GC_rich Low_complexity Low_complexity 1 56 0 536 194 75 0 chr20 37335083 37335217 -34818665 + L1M4 LINE L1 3944 4087 -2059 539 101 0 0 chr20 37335241 37335310 -34818572 + AluJ/FLAM SINE Alu 9 77 -235 381 143 0 107 chr20 37335317 37335401 -34818481 + Charlie1 DNA MER1_type 1945 2019 -742 780 172 0 0 chr20 37335401 37335517 -34818365 + AluJo/FLAM SINE Alu 3 118 -194 439 87 58 0 chr20 37335517 37335586 -34818296 - Alu SINE Alu -7 305 233 243 65 0 0 chr20 37335593 37335624 -34818258 + Charlie1 DNA MER1_type 2731 2761 0 267 247 56 34 chr20 37335635 37335724 -34818158 + L1ME LINE L1 5674 5764 -406 363 44 0 0 chr20 37335728 37335773 -34818109 + (TA)n Simple_repeat Simple_repeat 2 46 0 182 256 58 47 chr20 37336501 37336587 -34817295 + L2 LINE L2 2213 2299 -1015 390 262 9 19 chr20 37336591 37336698 -34817184 + MER5A DNA MER1_type 4 109 -80 225 0 0 0 chr20 37336822 37336847 -34817035 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 440 180 30 0 chr20 37336862 37336962 -34816920 + L2 LINE L2 2446 2548 -766 821 107 8 8 chr20 37336962 37337083 -34816799 + AluSq/x SINE Alu 2 122 -190 1491 261 147 44 chr20 37337130 37337541 -34816341 + L2 LINE L2 2047 2414 -899 1471 161 0 0 chr20 37337541 37337765 -34816117 - AluJo SINE Alu -88 224 1 1491 261 147 44 chr20 37337765 37338371 -34815511 + L2 LINE L2 2414 3180 -133 926 189 11 11 chr20 37338423 37338598 -34815284 - AluJo SINE Alu -20 292 118 283 205 181 0 chr20 37338598 37338681 -34815201 + L2 LINE L2 3211 3308 -5 245 323 205 33 chr20 37338676 37338786 -34815096 - L2 LINE L2 -1518 1796 1706 * 2009 126 16 7 chr20 37338786 37339095 -34814787 - AluSx SINE Alu 0 312 1 245 323 205 33 chr20 37339095 37339291 -34814591 - L2 LINE L2 -1608 1706 1437 213 121 0 0 chr20 37343947 37343980 -34809902 + (CA)n Simple_repeat Simple_repeat 1 33 0 459 216 81 0 chr20 37344109 37344220 -34809662 - L2 LINE L2 0 3313 3194 795 157 0 50 chr20 37345416 37345581 -34808301 - FLAM_C SINE Alu 0 158 1 574 302 60 95 chr20 37345651 37346082 -34807800 + L2 LINE L2 2856 3271 -1 2110 113 10 0 chr20 37346119 37346419 -34807463 + AluSg SINE Alu 1 303 -7 2231 128 0 0 chr20 37347060 37347372 -34806510 + AluSx SINE Alu 1 312 0 2090 131 0 10 chr20 37348457 37348791 -34805091 - AluSx SINE Alu 0 331 1 2097 122 0 28 chr20 37348859 37349038 -34804844 - AluSx SINE Alu 0 312 144 1985 123 0 7 chr20 37349038 37349330 -34804552 - AluSg SINE Alu -16 294 5 2097 122 0 28 chr20 37349330 37349471 -34804411 - AluSx SINE Alu -168 144 1 1669 176 62 0 chr20 37349473 37349763 -34804119 - AluJb SINE Alu -4 308 1 256 345 46 0 chr20 37349768 37349855 -34804027 + L2 LINE L2 3222 3312 -1 1544 166 54 0 chr20 37350253 37350531 -34803351 - AluJo SINE Alu -18 294 2 767 102 0 0 chr20 37350757 37350865 -34803017 + AluY SINE Alu 204 311 0 677 170 0 88 chr20 37350899 37351046 -34802836 + FRAM SINE Alu 38 171 -5 1973 129 3 3 chr20 37351048 37351342 -34802540 + AluSg SINE Alu 1 294 -16 2321 101 0 77 chr20 37351353 37351718 -34802164 - MER1B DNA MER1_type 0 337 1 207 293 0 0 chr20 37351886 37351944 -34801938 + MIR SINE MIR 78 135 -73 2065 118 0 3 chr20 37351984 37352280 -34801602 - AluSx SINE Alu -17 295 1 2317 87 0 0 chr20 37352442 37352741 -34801141 + AluY SINE Alu 1 299 -12 1818 111 15 11 chr20 37352743 37353014 -34800868 - AluSg SINE Alu -38 272 1 2015 138 3 0 chr20 37353284 37353580 -34800302 - AluSx SINE Alu -15 297 1 2290 109 0 0 chr20 37353750 37354062 -34799820 - AluSx SINE Alu 0 312 1 183 267 84 110 chr20 37354062 37354118 -34799764 + MER5A DNA MER1_type 9 65 -124 1987 127 3 29 chr20 37354118 37354433 -34799449 + AluSx SINE Alu 1 307 -5 183 267 84 110 chr20 37354433 37354559 -34799323 + MER5A DNA MER1_type 65 188 -1 672 257 92 16 chr20 37354824 37354967 -34798915 - L2 LINE L2 0 3313 3182 2030 136 0 0 chr20 37354967 37355269 -34798613 + AluJo SINE Alu 1 302 -10 672 257 92 16 chr20 37355269 37355374 -34798508 - L2 LINE L2 -131 3182 3046 2193 103 3 0 chr20 37355404 37355714 -34798168 + AluSx SINE Alu 1 311 -1 2127 92 7 0 chr20 37355715 37356079 -34797803 + AluSp SINE Alu 2 367 0 975 163 6 0 chr20 37356154 37356314 -34797568 + FRAM SINE Alu 1 161 -5 2304 70 10 0 chr20 37357215 37357513 -34796369 - AluSp SINE Alu -12 301 1 201 188 21 0 chr20 37359603 37359651 -34794231 + (CAGAGA)n Simple_repeat Simple_repeat 4 52 0 25 31 0 0 chr20 37359696 37359728 -34794154 + GC_rich Low_complexity Low_complexity 1 32 0 217 221 39 13 chr20 37360030 37360107 -34793775 + (CTGGGG)n Simple_repeat Simple_repeat 1 79 0 229 299 45 0 chr20 37360405 37360472 -34793410 + MIR SINE MIR 112 181 -81 410 321 132 5 chr20 37360494 37360547 -34793335 - MIR SINE MIR -1 261 216 1967 115 7 16 chr20 37360547 37360851 -34793031 - AluSx SINE Alu -8 304 4 410 321 132 5 chr20 37360851 37360987 -34792895 - MIR SINE MIR -46 216 48 708 111 0 0 chr20 37360993 37361092 -34792790 + Alu SINE Alu 203 301 -9 332 310 231 5 chr20 37361768 37361971 -34791911 - MIR SINE MIR 0 262 14 567 264 126 54 chr20 37362446 37362707 -34791175 + L1ME4a LINE L1 5559 5838 -283 1677 116 93 0 chr20 37362749 37363031 -34790851 + AluSc SINE Alu 1 306 0 445 319 54 18 chr20 37363117 37363393 -34790489 + L1ME LINE L1 5539 5824 -297 2160 76 0 14 chr20 37363400 37363717 -34790165 + AluSx SINE Alu 1 313 0 1134 105 0 0 chr20 37363717 37363869 -34790013 + AluSg/x SINE Alu 131 282 -28 339 274 137 20 chr20 37363917 37364063 -34789819 + L1ME LINE L1 5128 5290 -856 2310 91 7 0 chr20 37364153 37364461 -34789421 + AluSg SINE Alu 1 310 0 292 230 119 93 chr20 37364543 37364769 -34789113 + L1ME LINE L1 5563 5794 -327 2108 116 20 0 chr20 37364788 37365091 -34788791 + AluSx SINE Alu 1 309 -3 2277 77 0 3 chr20 37365240 37365540 -34788342 - AluY SINE Alu -12 299 1 2063 132 0 0 chr20 37365714 37366010 -34787872 - AluSx SINE Alu -16 296 1 588 203 31 16 chr20 37366290 37366418 -34787464 - FLAM_A SINE Alu 0 133 4 2264 102 0 0 chr20 37367489 37367793 -34786089 + AluSx SINE Alu 1 304 -8 2809 196 142 43 chr20 37368156 37368447 -34785435 + L1MC4 LINE L1 6896 7157 -885 863 152 0 8 chr20 37368447 37368579 -34785303 + FLAM_A SINE Alu 1 131 -2 2388 62 0 31 chr20 37368583 37368904 -34784978 + AluY SINE Alu 1 311 0 2809 196 142 43 chr20 37368904 37369486 -34784396 + L1MC4 LINE L1 7159 7861 -181 243 88 0 0 chr20 37369625 37369659 -34784223 + (CA)n Simple_repeat Simple_repeat 1 68 0 243 88 0 0 chr20 37369659 37369693 -34784189 + (CA)n Simple_repeat Simple_repeat 2 35 0 301 145 5 18 chr20 37369811 37369886 -34783996 + L1MC4 LINE L1 7923 8042 0 183 80 0 0 chr20 37369888 37369913 -34783969 + (CAGAT)n Simple_repeat Simple_repeat 1 25 0 276 317 59 0 chr20 37370187 37370239 -34783643 - MIR SINE MIR -135 127 80 1921 154 0 29 chr20 37370239 37370545 -34783337 - AluJb SINE Alu -15 297 1 276 317 59 0 chr20 37370545 37370593 -34783289 - MIR SINE MIR -182 80 21 2051 129 0 7 chr20 37370594 37370888 -34782994 + AluSx SINE Alu 1 292 -20 815 234 94 124 chr20 37374068 37374254 -34779628 + L2 LINE L2 2552 2742 -571 2380 97 0 19 chr20 37374254 37374563 -34779319 + AluSq SINE Alu 1 303 -10 2414 74 0 0 chr20 37374563 37374862 -34779020 + AluY SINE Alu 1 299 -12 815 234 94 124 chr20 37374862 37374949 -34778933 + L2 LINE L2 2741 2829 -484 1717 123 8 4 chr20 37374949 37375201 -34778681 + AluSq SINE Alu 55 307 -6 815 234 94 124 chr20 37375201 37375321 -34778561 + L2 LINE L2 2829 2951 -362 1520 177 16 23 chr20 37375321 37375626 -34778256 - AluJo SINE Alu -9 303 1 815 234 94 124 chr20 37375626 37375966 -34777916 + L2 LINE L2 2951 3267 -46 253 368 109 13 chr20 37376481 37376785 -34777097 - L3 LINE CR1 -107 1470 1138 1630 124 105 0 chr20 37377101 37377359 -34776523 + AluSx SINE Alu 1 285 -27 465 274 101 30 chr20 37378272 37378509 -34775373 + L2 LINE L2 2703 2956 -358 209 336 164 9 chr20 37378661 37378777 -34775105 + L2 LINE L2 3136 3269 -3 181 300 90 20 chr20 37378782 37378882 -34775000 - L3 LINE CR1 -641 936 830 2387 208 139 34 chr20 37378882 37379675 -34774207 + L1ME2 LINE L1 5274 6149 -15 2155 114 3 0 chr20 37379929 37380219 -34773663 - AluSx SINE Alu -21 291 1 246 330 165 0 chr20 37381250 37381365 -34772517 + L2 LINE L2 3139 3272 0 342 340 111 7 chr20 37381725 37381878 -34772004 - MIR3 SINE MIR -6 202 34 351 248 150 8 chr20 37382067 37382200 -34771682 + MIR SINE MIR 78 229 -33 258 233 33 0 chr20 37382470 37382530 -34771352 - MER63 DNA MER1_type 0 1061 1000 696 157 0 16 chr20 37383730 37383851 -34770031 + 7SK RNA RNA 7 125 -68 418 119 90 0 chr20 37383884 37383951 -34769931 + 7SK RNA RNA 121 193 0 2042 103 71 0 chr20 37384053 37384335 -34769547 + AluSx SINE Alu 1 302 -10 356 275 80 22 chr20 37384607 37384745 -34769137 + MIR SINE MIR 100 245 -17 231 273 146 9 chr20 37385088 37385198 -34768684 - MIR3 SINE MIR -3 205 81 1255 127 99 130 chr20 37386544 37386866 -34767016 + AluJb SINE Alu 1 312 0 949 106 8 0 chr20 37386974 37387106 -34766776 - FLAM_C SINE Alu 0 133 1 2480 81 0 10 chr20 37387612 37387920 -34765962 + AluSq SINE Alu 1 305 -8 582 136 39 0 chr20 37387920 37388014 -34765868 - U6 snRNA snRNA -6 101 1 2092 101 3 42 chr20 37388356 37388663 -34765219 + AluSg SINE Alu 1 295 -15 23 0 0 0 chr20 37393402 37393425 -34760457 + GC_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr20 37396753 37396784 -34757098 + AT_rich Low_complexity Low_complexity 1 31 0 1750 121 107 4 chr20 37397114 37397386 -34756496 - AluSq SINE Alu -9 304 5 2152 94 54 3 chr20 37398362 37398660 -34755222 + AluSq SINE Alu 1 313 0 23 0 0 0 chr20 37398660 37398683 -34755199 + AT_rich Low_complexity Low_complexity 1 23 0 200 286 84 34 chr20 37398694 37398813 -34755069 + MIR3 SINE MIR 67 191 -17 2074 96 3 65 chr20 37399063 37399386 -34754496 + AluSg1 SINE Alu 1 303 -6 333 0 0 0 chr20 37399386 37399423 -34754459 + (CA)n Simple_repeat Simple_repeat 2 38 0 38 0 0 0 chr20 37400236 37400274 -34753608 + AT_rich Low_complexity Low_complexity 1 38 0 2031 98 0 51 chr20 37400786 37401102 -34752780 - AluSx SINE Alu -12 300 1 2714 33 0 3 chr20 37405896 37406203 -34747679 + AluY SINE Alu 1 306 -5 2180 107 10 0 chr20 37406212 37406511 -34747371 + AluSq SINE Alu 1 302 -11 2205 111 0 0 chr20 37406525 37406823 -34747059 + AluSx SINE Alu 1 298 -14 650 160 64 0 chr20 37406891 37407016 -34746866 + AluJo SINE Alu 1 133 -169 1010 168 0 18 chr20 37407076 37407243 -34746639 + AluJo SINE Alu 136 299 -13 542 124 67 0 chr20 37407430 37407519 -34746363 + L1MD3 LINE L1 7729 7823 -172 578 138 156 18 chr20 37407519 37407628 -34746254 + FLAM_C SINE Alu 2 125 -18 488 139 52 160 chr20 37407653 37407712 -34746170 + L1MD3 LINE L1 7818 7882 -113 2333 97 3 3 chr20 37407712 37408023 -34745859 - AluY SINE Alu 0 311 1 2005 115 0 53 chr20 37408026 37408330 -34745552 - AluSx SINE Alu -24 288 1 1897 160 0 3 chr20 37408338 37408626 -34745256 - AluJb SINE Alu -25 287 1 488 139 52 160 chr20 37408626 37408747 -34745135 + L1MD3 LINE L1 7891 7990 -5 259 228 76 0 chr20 37408870 37408949 -34744933 + MER112 DNA MER1_type 10 94 -166 662 303 141 18 chr20 37409045 37409435 -34744447 + L2 LINE L2 2871 3308 -5 2268 78 11 4 chr20 37411703 37411984 -34741898 - AluY SINE Alu -28 283 1 949 195 0 29 chr20 37411984 37412158 -34741724 + AluJo SINE Alu 118 286 -26 2027 164 0 0 chr20 37412191 37412490 -34741392 + AluJb SINE Alu 1 299 -13 2463 72 3 3 chr20 37412535 37412841 -34741041 - AluY SINE Alu -5 306 1 2169 112 0 3 chr20 37412841 37413134 -34740748 - AluSp SINE Alu -20 293 1 2267 120 0 0 chr20 37413589 37413888 -34739994 + AluSx SINE Alu 1 299 -13 431 236 169 7 chr20 37413890 37414038 -34739844 + MER5A DNA MER1_type 18 189 0 289 271 0 0 chr20 37415332 37415391 -34738491 + L2 LINE L2 3196 3254 -18 747 260 0 6 chr20 37416045 37416180 -34737702 + L1MC4a LINE L1 5693 5828 -1980 2017 139 26 0 chr20 37416180 37416482 -34737400 + AluSx SINE Alu 1 310 -2 747 260 0 6 chr20 37416482 37416527 -34737355 + L1MC4a LINE L1 5828 5872 -1936 229 143 20 20 chr20 37416518 37416567 -34737315 + L1MD3 LINE L1 7777 7825 -170 * 2342 89 3 0 chr20 37416587 37416880 -34737002 + AluSp SINE Alu 1 294 -19 2134 125 3 0 chr20 37416889 37417178 -34736704 + AluSg SINE Alu 1 290 -20 243 0 0 0 chr20 37417342 37417369 -34736513 + (A)n Simple_repeat Simple_repeat 1 27 0 2137 123 0 3 chr20 37417447 37417748 -34736134 - AluSg SINE Alu -10 300 1 23 0 0 0 chr20 37417804 37417827 -34736055 + AT_rich Low_complexity Low_complexity 1 23 0 1812 153 0 27 chr20 37417837 37418137 -34735745 + AluJo SINE Alu 5 296 -16 801 167 35 28 chr20 37418370 37418514 -34735368 + AluJo SINE Alu 1 145 -167 1630 184 7 13 chr20 37418516 37418651 -34735231 + AluJo SINE Alu 1 135 -177 2315 84 3 22 chr20 37418651 37418962 -34734920 + AluY SINE Alu 1 305 -6 1220 168 0 120 chr20 37418964 37419297 -34734585 + AluJb SINE Alu 1 293 -19 1630 184 7 13 chr20 37419297 37419462 -34734420 + AluJo SINE Alu 136 302 -10 634 103 9 69 chr20 37419732 37419780 -34734102 - L1MA1 LINE L1 -4 6298 6249 2206 91 32 0 chr20 37419780 37420065 -34733817 - AluSg SINE Alu -16 294 1 634 103 9 69 chr20 37420065 37420132 -34733750 - L1MA1 LINE L1 -53 6249 6190 24 0 0 0 chr20 37420414 37420438 -34733444 + AT_rich Low_complexity Low_complexity 1 24 0 2473 72 0 3 chr20 37420606 37420911 -34732971 + AluY SINE Alu 1 304 -7 193 250 26 0 chr20 37421565 37421641 -34732241 + CT-rich Low_complexity Low_complexity 2 79 0 181 57 57 0 chr20 37421797 37421832 -34732050 + A-rich Low_complexity Low_complexity 2 38 0 2133 142 0 0 chr20 37421999 37422295 -34731587 + AluSx SINE Alu 1 296 -16 214 260 137 0 chr20 37422305 37422378 -34731504 + MIR SINE MIR 47 129 -133 2195 161 48 36 chr20 37422659 37423090 -34730792 + L1MD1 LINE L1 5447 5871 -371 1972 141 31 0 chr20 37423090 37423380 -34730502 + AluSx SINE Alu 1 299 -13 2311 103 0 0 chr20 37423380 37423709 -34730173 + AluY SINE Alu 1 311 0 2195 161 48 36 chr20 37423709 37423780 -34730102 + L1MD1 LINE L1 5870 5956 -286 2282 88 0 10 chr20 37423785 37424082 -34729800 + AluSg SINE Alu 1 294 -16 2358 75 0 40 chr20 37424082 37424404 -34729478 + AluSc SINE Alu 1 309 0 1911 123 54 0 chr20 37424431 37424707 -34729175 + AluSq SINE Alu 3 293 -20 2191 77 11 14 chr20 37424709 37425051 -34728831 + AluY SINE Alu 1 341 0 1943 149 4 0 chr20 37425052 37425328 -34728554 + AluSx SINE Alu 1 277 -35 190 0 67 0 chr20 37425334 37425364 -34728518 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 696 175 9 0 chr20 37425366 37425480 -34728402 + AluJo/FLAM SINE Alu 2 116 -186 2112 125 7 0 chr20 37425480 37425769 -34728113 - AluSx SINE Alu -21 291 1 1197 211 33 72 chr20 37425812 37426116 -34727766 + AluJb SINE Alu 2 293 -9 183 49 73 0 chr20 37426117 37426158 -34727724 + (TA)n Simple_repeat Simple_repeat 1 44 0 2274 97 3 23 chr20 37426160 37426469 -34727413 + AluSq SINE Alu 1 303 -10 1994 106 0 4 chr20 37426509 37426773 -34727109 - AluSq SINE Alu -9 304 42 311 0 227 0 chr20 37426773 37426817 -34727065 - AluS SINE Alu -224 79 26 1118 73 0 0 chr20 37426817 37426954 -34726928 + AluSp/q SINE Alu 167 303 -10 584 172 23 8 chr20 37426983 37427111 -34726771 + L1MB7 LINE L1 6031 6160 -24 8394 35 34 0 chr20 37427306 37427985 -34725897 + LTR13 LTR ERVK 1 724 -283 302 0 26 0 chr20 37427985 37428023 -34725859 + (TC)n Simple_repeat Simple_repeat 2 40 0 8394 35 34 0 chr20 37428023 37428317 -34725565 + LTR13 LTR ERVK 724 1007 0 1188 197 53 63 chr20 37428399 37428545 -34725337 + AluJo SINE Alu 1 147 -155 2127 129 0 16 chr20 37428545 37428848 -34725034 + AluSq SINE Alu 1 298 -15 1957 173 0 7 chr20 37428856 37429163 -34724719 + AluSx SINE Alu 1 305 -7 1188 197 53 63 chr20 37429163 37429306 -34724576 + AluJo SINE Alu 154 296 -6 536 162 0 9 chr20 37429308 37429419 -34724463 + GA-rich Low_complexity Low_complexity 3 112 0 1342 154 0 10 chr20 37429789 37429990 -34723892 + AluSx SINE Alu 1 199 -113 625 75 0 12 chr20 37429990 37430070 -34723812 + AluSg/x SINE Alu 65 143 -167 2353 86 3 13 chr20 37430070 37430372 -34723510 + AluSc SINE Alu 1 299 -10 1407 185 0 80 chr20 37430374 37430699 -34723183 + AluSq SINE Alu 1 299 -14 564 144 0 0 chr20 37430712 37430802 -34723080 + AluSg/x SINE Alu 211 300 -9 544 271 52 38 chr20 37431266 37431476 -34722406 - MER21B LTR ERV1 -125 738 526 1633 122 16 4 chr20 37431483 37431729 -34722153 + L1MC1 LINE L1 6083 6331 -2 328 253 51 0 chr20 37431838 37431917 -34721965 - L2 LINE L2 0 3313 3231 2208 123 7 0 chr20 37432042 37432352 -34721530 + AluSx SINE Alu 1 312 0 2132 110 0 55 chr20 37432353 37432484 -34721398 + AluSg SINE Alu 2 139 -171 2326 111 0 9 chr20 37432484 37432800 -34721082 + AluSp SINE Alu 1 313 0 2132 110 0 55 chr20 37432800 37432995 -34720887 + AluSg SINE Alu 139 310 0 1525 137 86 62 chr20 37433009 37433301 -34720581 + AluJo SINE Alu 9 307 -5 2086 126 0 0 chr20 37433303 37433580 -34720302 + AluSx SINE Alu 1 277 -35 1717 137 112 14 chr20 37433589 37433866 -34720016 + AluSq SINE Alu 1 304 -9 2344 100 3 0 chr20 37433870 37434170 -34719712 + AluSp SINE Alu 1 301 -12 2005 122 65 0 chr20 37434229 37434507 -34719375 - AluSq SINE Alu -17 296 1 2201 181 56 88 chr20 37434507 37435121 -34718761 - L1MC4a LINE L1 -881 6927 6332 1889 139 3 59 chr20 37435126 37435450 -34718432 - AluSx SINE Alu -6 306 1 997 152 0 0 chr20 37435450 37435595 -34718287 - AluJo SINE Alu -167 145 1 939 202 37 61 chr20 37435618 37435915 -34717967 - L1MC4a LINE L1 -1488 6320 6031 2383 88 0 16 chr20 37435915 37436223 -34717659 - AluSc SINE Alu -6 303 1 399 311 51 23 chr20 37436382 37436559 -34717323 + MIR3 SINE MIR 23 204 -4 1150 137 93 90 chr20 37437419 37437507 -34716375 + MER33 DNA MER1_type 1 87 -2498 1170 202 128 57 chr20 37437507 37437632 -34716250 + AluJo SINE Alu 1 116 -186 1699 199 0 3 chr20 37437632 37437939 -34715943 - AluJb SINE Alu -4 308 3 1170 202 128 57 chr20 37437939 37438095 -34715787 + AluJo SINE Alu 116 302 0 1150 137 93 90 chr20 37438095 37438202 -34715680 + MER33 DNA MER1_type 87 192 -2393 2378 86 26 3 chr20 37438202 37438505 -34715377 - AluSx SINE Alu -2 310 1 1150 137 93 90 chr20 37438505 37438554 -34715328 + MER33 DNA MER1_type 192 239 -2346 2591 61 0 6 chr20 37438554 37438865 -34715017 - AluY SINE Alu -2 309 1 1150 137 93 90 chr20 37438865 37438939 -34714943 + MER33 DNA MER1_type 239 322 -2 1044 154 18 0 chr20 37439047 37439216 -34714666 - AluSg/x SINE Alu -7 303 132 278 308 55 14 chr20 37439988 37440087 -34713795 + MIR SINE MIR 45 149 -113 2245 116 7 0 chr20 37440087 37440389 -34713493 + AluSq SINE Alu 1 304 -9 278 308 55 14 chr20 37440389 37440456 -34713426 + MIR SINE MIR 149 212 -50 1713 157 25 11 chr20 37440480 37440761 -34713121 + AluJo SINE Alu 1 285 -27 2050 120 18 7 chr20 37440805 37441088 -34712794 + AluSx SINE Alu 1 286 -26 793 52 52 12 chr20 37441127 37441299 -34712583 + (TA)n Simple_repeat Simple_repeat 2 180 0 1479 241 74 21 chr20 37441366 37442166 -34711716 + L1MEc LINE L1 1887 2692 -3523 1019 182 167 0 chr20 37442201 37442393 -34711489 + MER58A DNA MER1_type 1 224 0 2294 104 3 0 chr20 37444959 37445266 -34708616 - AluSx SINE Alu -4 308 1 1898 146 7 0 chr20 37445824 37446104 -34707778 - AluJb SINE Alu -30 282 1 1459 167 30 66 chr20 37446107 37446199 -34707683 - L1MB3 LINE L1 0 6183 6089 2563 65 3 0 chr20 37446199 37446507 -34707375 + AluY SINE Alu 2 310 -1 1459 167 30 66 chr20 37446507 37446780 -34707102 - L1MB3 LINE L1 -94 6089 5831 471 318 94 49 chr20 37446907 37446977 -34706905 + L2 LINE L2 2837 2902 -411 1658 159 0 33 chr20 37446977 37447253 -34706629 - AluJo SINE Alu -45 267 1 471 318 94 49 chr20 37447253 37447629 -34706253 + L2 LINE L2 2902 3303 -10 2181 136 3 3 chr20 37447650 37447958 -34705924 + AluSq SINE Alu 1 308 -5 859 180 12 0 chr20 37447959 37448131 -34705751 + L1ME2 LINE L1 5690 5863 -301 444 290 46 0 chr20 37448151 37448282 -34705600 - MER82 DNA MER2_type 0 653 517 841 188 0 0 chr20 37448285 37448418 -34705464 + FLAM_C SINE Alu 1 133 0 2274 108 0 0 chr20 37448428 37448714 -34705168 - AluSx SINE Alu -22 290 5 2487 90 0 0 chr20 37449064 37449374 -34704508 + AluSg SINE Alu 1 310 0 22 43 0 21 chr20 37449406 37449436 -34704446 + AT_rich Low_complexity Low_complexity 1 31 -15 1723 91 4 0 chr20 37449436 37449678 -34704204 + MER75B DNA T2_type 1 243 0 22 43 0 21 chr20 37449678 37449694 -34704188 + AT_rich Low_complexity Low_complexity 31 46 0 2048 130 16 23 chr20 37449694 37450002 -34703880 - AluSx SINE Alu 0 312 7 227 226 75 0 chr20 37450038 37450091 -34703791 - MER82 DNA MER2_type -161 492 436 2183 117 0 7 chr20 37450091 37450390 -34703492 - AluSx SINE Alu -7 305 9 828 201 17 17 chr20 37450396 37450575 -34703307 - MER82 DNA MER2_type -445 208 30 666 198 21 142 chr20 37450595 37450838 -34703044 + L1ME2 LINE L1 5901 6105 -59 2038 140 7 0 chr20 37450838 37451123 -34702759 + AluSx SINE Alu 1 287 -25 666 198 21 142 chr20 37451123 37451167 -34702715 + L1ME2 LINE L1 6105 6153 -11 2188 107 0 49 chr20 37451206 37451532 -34702350 + AluSg SINE Alu 1 310 0 2084 122 31 0 chr20 37451581 37451868 -34702014 + AluSx SINE Alu 1 296 -16 1199 168 25 5 chr20 37451928 37452131 -34701751 - AluJo SINE Alu -19 293 87 475 327 28 60 chr20 37452132 37452484 -34701398 + L1MCc LINE L1 102 442 -5981 2134 118 3 50 chr20 37452526 37452847 -34701035 + AluSq SINE Alu 1 306 -7 738 257 85 25 chr20 37453312 37453720 -34700162 + L1MCc LINE L1 1129 1566 -4889 798 237 72 0 chr20 37453736 37453972 -34699910 + L1MCc LINE L1 3312 3564 -3377 664 111 0 0 chr20 37454007 37454106 -34699776 + AluSc SINE Alu 209 307 -2 1671 220 32 36 chr20 37454108 37454542 -34699340 + L1MCc LINE L1 4059 4459 -2482 770 126 0 17 chr20 37454542 37454661 -34699221 + FLAM_C SINE Alu 2 118 -15 1671 220 32 36 chr20 37454661 37454980 -34698902 + L1MCc LINE L1 4459 4778 -2163 2216 88 0 69 chr20 37455161 37455479 -34698403 - AluSx SINE Alu -16 296 1 1807 171 7 3 chr20 37455486 37455778 -34698104 - AluJo SINE Alu -19 293 1 2222 130 0 0 chr20 37455789 37456089 -34697793 - AluSx SINE Alu -12 300 1 2325 123 3 0 chr20 37456351 37456661 -34697221 + AluSx SINE Alu 1 311 -1 1605 150 49 0 chr20 37457081 37457327 -34696555 - AluSx SINE Alu -24 288 31 1509 164 4 16 chr20 37457327 37457576 -34696306 + AluJo SINE Alu 51 297 -15 2290 118 0 6 chr20 37457579 37457894 -34695988 + AluSq SINE Alu 1 313 0 182 349 0 16 chr20 37457903 37457966 -34695916 + L2 LINE L2 3121 3182 -90 1592 141 18 14 chr20 37458049 37458326 -34695556 + L1MB2 LINE L1 5894 6171 0 2351 111 0 0 chr20 37458471 37458778 -34695104 + AluSq SINE Alu 1 307 -6 23 33 0 0 chr20 37458949 37458979 -34694903 + AT_rich Low_complexity Low_complexity 1 30 0 1725 203 7 45 chr20 37459311 37459492 -34694390 + MSTD LTR MaLR 1 187 -209 2126 89 7 18 chr20 37459492 37459802 -34694080 - AluSg SINE Alu 0 307 1 1725 203 7 45 chr20 37459802 37460039 -34693843 + MSTD LTR MaLR 187 396 0 185 246 53 35 chr20 37460048 37460105 -34693777 + L2 LINE L2 2991 3048 -224 1179 178 66 0 chr20 37460213 37460426 -34693456 - AluJo SINE Alu 0 312 86 2255 117 0 0 chr20 37460428 37460727 -34693155 - AluSx SINE Alu -13 299 1 2565 75 0 0 chr20 37460736 37461042 -34692840 - AluY SINE Alu -5 306 1 691 268 19 19 chr20 37461132 37461337 -34692545 - MIR SINE MIR -30 232 28 188 281 18 18 chr20 37461349 37461406 -34692476 - MIR3 SINE MIR -17 191 135 2159 135 3 6 chr20 37461491 37461802 -34692080 - AluSx SINE Alu -2 310 1 1876 162 0 17 chr20 37461804 37462101 -34691781 - AluJb SINE Alu -16 296 5 442 196 62 10 chr20 37462219 37462316 -34691566 + MIR SINE MIR 128 229 -33 614 280 149 90 chr20 37462368 37462432 -34691450 - L3 LINE CR1 -255 1322 1263 2286 89 27 0 chr20 37462432 37462724 -34691158 - AluSg SINE Alu -10 300 1 614 280 149 90 chr20 37462724 37463216 -34690666 - L3 LINE CR1 -314 1263 733 210 253 160 0 chr20 37463236 37463311 -34690571 + MIR SINE MIR 166 252 -10 262 197 106 45 chr20 37463332 37463398 -34690484 + L2 LINE L2 3244 3313 0 612 237 0 53 chr20 37463466 37463618 -34690264 - MIR SINE MIR -111 151 8 2147 133 0 13 chr20 37463996 37464305 -34689577 + AluSx SINE Alu 1 305 -7 1438 163 93 53 chr20 37464312 37464612 -34689270 + AluJo SINE Alu 1 312 0 257 255 8 8 chr20 37464638 37464705 -34689177 + MIR SINE MIR 100 150 -58 458 276 102 76 chr20 37464734 37464959 -34688923 - MIR SINE MIR -1 261 31 2143 141 0 3 chr20 37468650 37468962 -34684920 + AluJb SINE Alu 1 311 -1 238 298 0 0 chr20 37468969 37469026 -34684856 - MIR SINE MIR -67 141 85 428 167 0 98 chr20 37469076 37469178 -34684704 - MIR SINE MIR -85 123 32 358 361 0 0 chr20 37469372 37469530 -34684352 + (TG)n Simple_repeat Simple_repeat 1 158 0 391 257 43 14 chr20 37469871 37470011 -34683871 - MIR3 SINE MIR -6 202 59 447 269 23 23 chr20 37470091 37470221 -34683661 - MIR3 SINE MIR -5 203 74 350 263 125 31 chr20 37470426 37470586 -34683296 + MIR3 SINE MIR 16 190 -18 192 77 0 0 chr20 37471491 37471517 -34682365 + (CAG)n Simple_repeat Simple_repeat 2 27 0 417 20 0 0 chr20 37471822 37471872 -34682010 + (CA)n Simple_repeat Simple_repeat 1 50 0 708 86 0 0 chr20 37472297 37472402 -34681480 + (TG)n Simple_repeat Simple_repeat 2 106 0 2307 73 35 0 chr20 37472726 37473015 -34680867 - AluY SINE Alu -11 300 2 329 359 14 21 chr20 37473178 37473320 -34680562 + L2 LINE L2 2944 3084 -188 2300 109 0 0 chr20 37473395 37473689 -34680193 - AluSx SINE Alu 0 312 19 252 61 0 0 chr20 37473689 37473722 -34680160 + AluYa5 SINE Alu 112 144 -157 538 178 0 0 chr20 37473722 37473823 -34680059 + AluSg/x SINE Alu 206 306 -3 26 0 0 0 chr20 37473823 37473849 -34680033 + AT_rich Low_complexity Low_complexity 1 26 0 360 298 128 21 chr20 37474251 37474392 -34679490 + L2 LINE L2 3117 3272 0 253 397 0 13 chr20 37474428 37474506 -34679376 + L2 LINE L2 3106 3182 -90 567 268 95 12 chr20 37474589 37474757 -34679125 + MIR SINE MIR 15 196 -66 1132 66 0 15 chr20 37474762 37474899 -34678983 + AluY SINE Alu 1 135 -176 2365 97 0 3 chr20 37474945 37475243 -34678639 - AluSc SINE Alu -12 297 1 1776 156 87 0 chr20 37475355 37475631 -34678251 - AluJb SINE Alu -12 300 1 1881 100 4 0 chr20 37475640 37475881 -34678001 - AluSx SINE Alu -15 297 56 282 157 0 0 chr20 37475953 37476004 -34677878 - AluSx SINE Alu -251 51 1 2175 104 7 29 chr20 37476028 37476337 -34677545 - AluSx SINE Alu -10 302 1 180 291 0 0 chr20 37476337 37476392 -34677490 - MIR SINE MIR -56 152 98 2276 95 3 0 chr20 37476993 37477302 -34676580 - AluSx SINE Alu 0 310 1 273 296 139 13 chr20 37477467 37477567 -34676315 + MIR SINE MIR 4 115 -93 1263 238 108 42 chr20 37477579 37478066 -34675816 - L2 LINE L2 -8 3305 2783 2302 108 0 3 chr20 37478075 37478380 -34675502 - AluSg SINE Alu -2 308 5 1093 90 0 35 chr20 37478380 37478525 -34675357 - AluSq/x SINE Alu -172 140 1 235 227 0 45 chr20 37478525 37478591 -34675291 - L2 LINE L2 -536 2778 2716 * 528 266 15 9 chr20 37478576 37478725 -34675157 + MIR SINE MIR 15 164 -63 897 108 8 0 chr20 37478752 37478872 -34675010 + AluJo/FLAM SINE Alu 13 133 -179 2278 112 0 3 chr20 37478874 37479177 -34674705 + AluSg SINE Alu 1 302 -8 2435 87 6 3 chr20 37479179 37479491 -34674391 + AluSp SINE Alu 1 313 0 185 311 85 9 chr20 37479501 37479517 -34674365 + MIR SINE MIR 136 149 -113 2335 105 0 7 chr20 37479517 37479823 -34674059 + AluSq SINE Alu 1 304 -9 185 311 85 9 chr20 37479823 37479912 -34673970 + MIR SINE MIR 149 249 -13 1215 150 0 0 chr20 37479917 37480097 -34673785 - FRAM SINE Alu 0 176 1 180 0 0 0 chr20 37480108 37480128 -34673754 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 457 304 30 7 chr20 37480145 37480280 -34673602 - MIR SINE MIR -105 157 20 508 59 0 0 chr20 37480475 37480543 -34673339 - L1PA5 LINE L1 -1 6153 6086 1855 48 0 13 chr20 37480544 37480775 -34673107 - L1PA5 LINE L1 0 6154 5927 287 54 0 0 chr20 37480776 37480813 -34673069 + L1PA5 LINE L1 5912 5948 -207 28 48 0 0 chr20 37481084 37481126 -34672756 + AT_rich Low_complexity Low_complexity 1 42 0 887 150 0 0 chr20 37481326 37481459 -34672423 + FLAM_C SINE Alu 1 133 0 318 205 0 51 chr20 37481505 37481583 -34672299 - L1ME4a LINE L1 -7 6114 6041 344 273 30 0 chr20 37481738 37481837 -34672045 - MIR SINE MIR -84 178 77 34 24 0 0 chr20 37481884 37481925 -34671957 + AT_rich Low_complexity Low_complexity 1 41 0 2108 128 27 0 chr20 37481943 37482239 -34671643 - AluSx SINE Alu -8 304 1 180 274 143 0 chr20 37482543 37482627 -34671255 + L2 LINE L2 2897 2992 -280 770 194 0 0 chr20 37482639 37482763 -34671119 - FLAM_A SINE Alu -9 124 1 1199 138 0 6 chr20 37482777 37482951 -34670931 - AluJb SINE Alu -19 293 121 274 295 84 68 chr20 37483003 37483193 -34670689 + L2 LINE L2 3121 3313 0 1788 183 0 16 chr20 37483202 37483513 -34670369 + AluJo SINE Alu 7 312 0 2130 113 10 10 chr20 37483515 37483815 -34670067 + AluSx SINE Alu 1 300 -12 510 70 0 0 chr20 37484544 37484615 -34669267 + (TA)n Simple_repeat Simple_repeat 1 71 0 23 0 0 0 chr20 37484649 37484672 -34669210 + AT_rich Low_complexity Low_complexity 1 23 0 883 126 0 8 chr20 37485078 37485205 -34668677 - AluJb SINE Alu -4 308 183 947 142 0 0 chr20 37485205 37485339 -34668543 - FLAM_C SINE Alu -9 134 1 1552 156 34 7 chr20 37485397 37485666 -34668216 + MER1B DNA MER1_type 1 276 -63 181 326 0 0 chr20 37485796 37485842 -34668040 + L2 LINE L2 3268 3313 0 2371 86 3 0 chr20 37485936 37486227 -34667655 - AluSp SINE Alu -21 292 1 857 280 172 23 chr20 37486310 37486473 -34667409 - L2 LINE L2 0 3313 3176 2382 83 0 3 chr20 37486473 37486774 -34667108 + AluY SINE Alu 1 300 -11 857 280 172 23 chr20 37486774 37486964 -34666918 - L2 LINE L2 -137 3176 2907 381 263 114 18 chr20 37487328 37487442 -34666440 - L2 LINE L2 0 3272 3148 418 275 138 6 chr20 37487442 37487609 -34666273 + MER5A DNA MER1_type 1 189 0 2570 47 0 7 chr20 37487677 37487975 -34665907 + AluSc SINE Alu 1 296 -13 2505 60 3 0 chr20 37489401 37489699 -34664183 - AluSp SINE Alu -14 299 1 531 231 23 44 chr20 37489704 37489862 -34664020 - MIR SINE MIR -65 143 40 216 291 76 13 chr20 37490191 37490270 -34663612 + MIR SINE MIR 1 84 -178 2073 125 14 3 chr20 37490291 37490586 -34663296 - AluSx SINE Alu -14 298 1 264 358 22 56 chr20 37490688 37490867 -34663015 - L2 LINE L2 -22 3291 3119 861 159 76 0 chr20 37490877 37491022 -34662860 - FRAM SINE Alu -10 166 11 467 127 0 13 chr20 37491033 37491112 -34662770 - FLAM_A SINE Alu -10 132 55 1374 146 0 10 chr20 37491112 37491318 -34662564 + AluSg/x SINE Alu 94 297 -15 463 228 101 7 chr20 37491319 37491468 -34662414 - L2 LINE L2 -1118 2196 2034 187 358 125 0 chr20 37491842 37491962 -34661920 + L2 LINE L2 3138 3272 0 471 154 222 0 chr20 37492349 37492466 -34661416 - L1MC3 LINE L1 0 7785 7643 866 106 0 124 chr20 37492473 37492634 -34661248 - FLAM_C SINE Alu -2 141 1 383 250 115 0 chr20 37492686 37492782 -34661100 + MIR3 SINE MIR 98 204 -4 25 51 0 0 chr20 37492788 37492827 -34661055 + AT_rich Low_complexity Low_complexity 1 39 0 419 88 0 121 chr20 37492950 37493003 -34660879 - MER116 DNA Mariner 0 80 41 1351 211 34 14 chr20 37493003 37493297 -34660585 + AluJo SINE Alu 1 300 -12 419 88 0 121 chr20 37493297 37493334 -34660548 - MER116 DNA Mariner -39 41 1 329 213 0 0 chr20 37493955 37494016 -34659866 - Charlie8 DNA MER1_type -2155 262 202 249 208 0 0 chr20 37494017 37494065 -34659817 - Charlie8 DNA MER1_type -2171 246 199 * 715 237 29 24 chr20 37494058 37494265 -34659617 - Charlie8 DNA MER1_type -2168 249 42 283 315 11 0 chr20 37494833 37494925 -34658957 - MIR SINE MIR -96 112 20 541 254 21 121 chr20 37495100 37495340 -34658542 + MIR SINE MIR 37 252 -10 249 194 290 0 chr20 37495500 37495562 -34658320 - L2 LINE L2 -4 3268 3189 273 283 26 35 chr20 37495624 37495737 -34658145 - MER103 DNA DNA -1 165 54 188 125 181 56 chr20 37496200 37496272 -34657610 - MIR SINE MIR -46 216 136 1037 181 0 0 chr20 37496278 37496438 -34657444 - AluJb SINE Alu -20 292 133 192 40 0 0 chr20 37496553 37496578 -34657304 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2310 112 0 0 chr20 37496629 37496925 -34656957 + AluSx SINE Alu 1 296 -16 358 158 79 40 chr20 37497649 37497724 -34656158 + Tigger5 DNA MER2_type 1 78 -2245 236 217 0 0 chr20 37497724 37497770 -34656112 - Tigger5 DNA MER2_type -3 2320 2275 1550 184 49 26 chr20 37497801 37498106 -34655776 - AluJo SINE Alu 0 312 1 2293 106 7 3 chr20 37498149 37498451 -34655431 + AluSg SINE Alu 1 303 -7 338 213 80 0 chr20 37498464 37498539 -34655343 + Tigger5 DNA MER2_type 2242 2322 -1 292 256 15 131 chr20 37498552 37498646 -34655236 - MIR SINE MIR -75 187 112 2353 122 0 0 chr20 37498646 37498957 -34654925 + AluSx SINE Alu 1 311 -1 292 256 15 131 chr20 37498957 37498999 -34654883 - MIR SINE MIR -150 112 67 415 271 32 78 chr20 37501306 37501452 -34652430 + L2 LINE L2 2871 3005 -267 2238 108 3 14 chr20 37501452 37501749 -34652133 - AluSx SINE Alu -10 302 9 415 271 32 78 chr20 37501749 37501820 -34652062 + L2 LINE L2 3005 3078 -194 190 282 0 99 chr20 37502133 37502183 -34651699 + L2 LINE L2 3244 3287 -26 1956 153 7 7 chr20 37502183 37502484 -34651398 - AluJo SINE Alu -11 301 1 190 282 0 99 chr20 37502484 37502504 -34651378 + L2 LINE L2 3287 3307 -6 1413 127 86 49 chr20 37502581 37502826 -34651056 + AluJo SINE Alu 46 299 -13 201 74 0 0 chr20 37503303 37503330 -34650552 + (TTGGGG)n Simple_repeat Simple_repeat 6 32 0 193 235 147 0 chr20 37503656 37503724 -34650158 - L2 LINE L2 0 3313 3236 704 269 131 87 chr20 37503758 37503976 -34649906 + L3 LINE CR1 1088 1295 -282 2289 97 0 10 chr20 37503976 37504275 -34649607 + AluSp SINE Alu 1 296 -17 704 269 131 87 chr20 37504275 37504468 -34649414 + L3 LINE CR1 1295 1517 -60 677 272 94 0 chr20 37504790 37505003 -34648879 - Charlie8 DNA MER1_type -2154 263 31 446 260 221 0 chr20 37505164 37505345 -34648537 - MIR SINE MIR 0 262 42 244 239 159 11 chr20 37507740 37507828 -34646054 - L2 LINE L2 -15 3298 3198 287 305 66 15 chr20 37508203 37508379 -34645503 + MIR SINE MIR 20 250 -12 409 200 84 21 chr20 37508564 37508659 -34645223 + FRAM SINE Alu 1 99 -77 627 252 71 24 chr20 37508674 37508928 -34644954 - L1MC4a LINE L1 -1736 6072 5807 250 354 100 19 chr20 37509234 37509678 -34644204 + L2 LINE L2 2584 3070 -202 2024 130 3 43 chr20 37510369 37510524 -34643358 - AluSx SINE Alu -23 289 150 2255 116 3 0 chr20 37510524 37510818 -34643064 - AluSq SINE Alu -18 295 1 2024 130 3 43 chr20 37510818 37510963 -34642919 - AluSx SINE Alu -162 150 1 210 304 96 40 chr20 37511105 37511230 -34642652 + L2 LINE L2 3163 3294 -19 229 216 159 11 chr20 37511646 37511734 -34642148 - HAL1b LINE L1 -11 1337 1237 2332 92 10 0 chr20 37511793 37512086 -34641796 + AluSg SINE Alu 1 296 -14 488 298 60 13 chr20 37512195 37512346 -34641536 + L2 LINE L2 3115 3272 0 358 263 0 0 chr20 37513782 37513862 -34640020 + MIR SINE MIR 183 262 0 576 299 103 93 chr20 37513993 37514088 -34639794 - L1MEc LINE L1 -4102 2208 2115 2184 108 23 10 chr20 37514088 37514394 -34639488 - AluSg SINE Alu 0 310 1 576 299 103 93 chr20 37514394 37514644 -34639238 - L1MEc LINE L1 -4195 2115 1869 1937 138 17 14 chr20 37514644 37514940 -34638942 + AluJb SINE Alu 1 297 -15 576 299 103 93 chr20 37514940 37515202 -34638680 - L1MEc LINE L1 -4441 1869 1611 2071 150 10 3 chr20 37515202 37515509 -34638373 - AluJb SINE Alu -3 309 1 576 299 103 93 chr20 37515509 37515557 -34638325 - L1MEc LINE L1 -4699 1611 1565 522 0 0 0 chr20 37515557 37515615 -34638267 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 576 299 103 93 chr20 37515615 37515675 -34638207 - L1MEc LINE L1 -4745 1565 1483 2391 76 3 28 chr20 37515730 37516047 -34637835 - AluY SINE Alu -2 309 1 2183 118 6 22 chr20 37516052 37516367 -34637515 - AluSx SINE Alu -1 311 2 266 272 19 19 chr20 37516397 37516500 -34637382 - L1MEc LINE L1 -4862 1257 1155 22 56 0 0 chr20 37516511 37516547 -34637335 + AT_rich Low_complexity Low_complexity 1 36 0 2377 98 3 0 chr20 37516547 37516843 -34637039 + AluSp SINE Alu 1 297 -16 1705 141 15 78 chr20 37516846 37517179 -34636703 - AluJo SINE Alu 0 312 1 784 225 49 63 chr20 37517179 37517668 -34636214 - L1MEc LINE L1 -4957 1162 681 228 135 0 0 chr20 37517675 37517712 -34636170 + (T)n Simple_repeat Simple_repeat 1 37 0 524 279 125 14 chr20 37517740 37517948 -34635934 - L1MEc LINE L1 -5448 671 441 833 181 0 0 chr20 37518123 37518256 -34635626 - FLAM_A SINE Alu 0 133 1 1141 205 111 30 chr20 37518256 37518468 -34635414 - MER58B DNA MER1_type -2096 324 130 742 116 116 16 chr20 37518468 37518589 -34635293 + FLAM_C SINE Alu 1 133 0 2419 94 3 7 chr20 37518598 37518905 -34634977 + AluSx SINE Alu 1 306 -6 1141 205 111 30 chr20 37518905 37518980 -34634902 - MER58B DNA MER1_type -2297 123 3 989 163 0 7 chr20 37518988 37519141 -34634741 - FRAM SINE Alu -3 173 22 2138 123 13 25 chr20 37519156 37519472 -34634410 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 37519479 37519503 -34634379 + AT_rich Low_complexity Low_complexity 1 24 0 1433 131 86 0 chr20 37519538 37519759 -34634123 - AluSg/x SINE Alu -7 305 66 1615 171 7 48 chr20 37519759 37520052 -34633830 - AluJo SINE Alu -31 281 1 395 255 45 19 chr20 37520063 37520220 -34633662 - L1MEc LINE L1 -5955 164 4 237 182 23 0 chr20 37520317 37520361 -34633521 + L2 LINE L2 3264 3308 -5 2404 98 0 7 chr20 37520695 37521001 -34632881 + AluSx SINE Alu 1 304 -8 188 356 17 0 chr20 37521060 37521119 -34632763 - MIR SINE MIR 0 262 203 911 115 0 8 chr20 37521162 37521292 -34632590 + FLAM_C SINE Alu 1 129 -4 180 286 0 20 chr20 37521307 37521356 -34632526 - MIR SINE MIR -169 93 46 215 267 267 8 chr20 37521375 37521495 -34632387 - L3 LINE CR1 -74 1503 1353 324 306 219 23 chr20 37521533 37521798 -34632084 - L3 LINE CR1 -417 1160 844 233 135 0 0 chr20 37521803 37521840 -34632042 - tRNA-Cys-TGC tRNA tRNA -38 37 1 2024 146 0 31 chr20 37521951 37522273 -34631609 - AluJb SINE Alu 0 312 1 468 245 106 48 chr20 37522291 37522413 -34631469 - L2 LINE L2 -256 3057 2917 2329 100 0 7 chr20 37522413 37522712 -34631170 + AluSx SINE Alu 1 297 -15 468 245 106 48 chr20 37522712 37522797 -34631085 - L2 LINE L2 -396 2917 2838 709 231 93 13 chr20 37522918 37523143 -34630739 - MIR SINE MIR -16 246 4 759 173 0 0 chr20 37523407 37523534 -34630348 + FLAM_A SINE Alu 1 127 -6 2249 125 0 0 chr20 37523540 37523845 -34630037 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr20 37523915 37523941 -34629941 + AT_rich Low_complexity Low_complexity 1 26 0 292 267 117 50 chr20 37523945 37524065 -34629817 - MIR SINE MIR -70 192 65 262 287 11 46 chr20 37524898 37524985 -34628897 - L2 LINE L2 0 3313 3230 971 119 8 0 chr20 37524996 37525130 -34628752 + AluSq/x SINE Alu 1 135 -177 2167 114 23 0 chr20 37525130 37525429 -34628453 + AluSx SINE Alu 1 306 -6 971 288 91 24 chr20 37525437 37525689 -34628193 - L2 LINE L2 -69 3244 3011 1484 172 61 9 chr20 37525689 37526015 -34627867 + L1MB8 LINE L1 5836 6178 0 971 288 91 24 chr20 37526015 37526236 -34627646 - L2 LINE L2 -302 3011 2739 2106 132 0 0 chr20 37526249 37526536 -34627346 - AluSx SINE Alu -23 289 3 230 196 0 0 chr20 37526581 37526637 -34627245 + LTR66 LTR ERVL 401 456 -154 190 273 18 0 chr20 37526683 37526738 -34627144 - L2 LINE L2 -664 2650 2595 1796 165 30 24 chr20 37527487 37527784 -34626098 - AluJo SINE Alu -13 299 1 782 289 124 47 chr20 37528333 37528897 -34624985 - L2 LINE L2 -1 3312 2694 2069 114 47 13 chr20 37528990 37529289 -34624593 + AluSx SINE Alu 1 309 -3 334 319 47 62 chr20 37529330 37529669 -34624213 - L2 LINE L2 -665 2649 2316 1252 129 0 0 chr20 37529701 37529872 -34624010 + AluSg/x SINE Alu 133 303 -7 218 294 47 24 chr20 37529874 37529959 -34623923 + MIR SINE MIR 176 262 0 796 289 32 4 chr20 37531666 37531915 -34621967 + MIR SINE MIR 1 256 -6 237 331 108 0 chr20 37532332 37532462 -34621420 + MIR SINE MIR 49 192 -70 2285 127 0 0 chr20 37532505 37532805 -34621077 + AluSq SINE Alu 1 300 -13 208 362 78 0 chr20 37532991 37533107 -34620775 - L2 LINE L2 -10 3303 3179 862 177 171 11 chr20 37533774 37533955 -34619927 - AluSx SINE Alu -11 298 89 204 304 18 0 chr20 37533993 37534049 -34619833 - MIR3 SINE MIR -9 199 143 609 96 0 0 chr20 37534140 37534223 -34619659 - AluSx SINE Alu -229 83 1 1414 115 0 5 chr20 37534677 37534869 -34619013 + AluSg/x SINE Alu 110 300 -10 182 339 18 0 chr20 37535008 37535064 -34618818 - MIR3 SINE MIR -9 199 143 195 42 0 0 chr20 37535327 37535351 -34618531 + (TCTCC)n Simple_repeat Simple_repeat 4 27 0 478 252 75 116 chr20 37538659 37538882 -34615000 - L2 LINE L2 -43 3229 3019 2438 96 0 0 chr20 37538882 37539184 -34614698 + AluSx SINE Alu 1 302 -10 478 252 75 116 chr20 37539184 37539254 -34614628 - L2 LINE L2 -253 3019 2948 307 296 200 22 chr20 37539307 37539662 -34614220 - L2 LINE L2 -453 2861 2444 227 298 60 0 chr20 37539904 37539988 -34613894 + L2 LINE L2 3164 3252 -20 272 309 43 0 chr20 37540212 37540306 -34613576 + MIR SINE MIR 50 147 -115 250 275 0 109 chr20 37540814 37540952 -34612930 - MIR SINE MIR -120 142 20 258 330 68 10 chr20 37541014 37541117 -34612765 + MIR3 SINE MIR 51 159 -49 481 157 116 107 chr20 37541765 37541826 -34612056 + MER58A DNA MER1_type 4 63 -278 2219 124 0 3 chr20 37541826 37542125 -34611757 - AluSg SINE Alu -12 298 1 481 157 116 107 chr20 37542125 37542184 -34611698 + MER58A DNA MER1_type 63 125 -99 263 324 86 0 chr20 37543141 37543246 -34610636 + L2 LINE L2 3154 3267 -5 2028 152 0 3 chr20 37544228 37544518 -34609364 + AluSx SINE Alu 4 292 -20 260 204 54 43 chr20 37544522 37544615 -34609267 + L1ME2 LINE L1 6062 6155 -9 209 262 33 0 chr20 37544629 37544690 -34609192 - MER5B DNA MER1_type -115 63 1 287 344 62 0 chr20 37545586 37545714 -34608168 - L2 LINE L2 -28 3244 3109 895 204 0 0 chr20 37546216 37546368 -34607514 - FRAM SINE Alu -21 155 4 2414 96 3 13 chr20 37546756 37547070 -34606812 - AluSp SINE Alu -2 311 1 1225 138 0 6 chr20 37551115 37551289 -34602593 + AluJb SINE Alu 134 306 -6 1647 145 93 24 chr20 37551299 37551589 -34602293 + AluJb SINE Alu 2 311 -1 365 228 41 87 chr20 37551960 37552179 -34601703 - L1MC5 LINE L1 -865 7096 6888 229 243 71 138 chr20 37552211 37552260 -34601622 - L1MC4a LINE L1 -1072 6736 6685 2317 99 3 10 chr20 37552260 37552574 -34601308 + AluSx SINE Alu 1 312 0 229 243 71 138 chr20 37552574 37552673 -34601209 - L1MC4a LINE L1 -1123 6685 6581 411 132 57 38 chr20 37552673 37552779 -34601103 + L1MB3 LINE L1 6073 6180 -3 229 243 71 138 chr20 37552779 37552813 -34601069 - L1MC4a LINE L1 -1227 6581 6570 2516 76 7 0 chr20 37552813 37553117 -34600765 + AluSg SINE Alu 1 306 -4 229 243 71 138 chr20 37553117 37553171 -34600711 - L1MC4a LINE L1 -1238 6570 6514 2247 139 0 0 chr20 37553175 37553484 -34600398 - AluSx SINE Alu -3 309 1 1204 212 0 5 chr20 37553529 37553751 -34600131 + AluJb SINE Alu 78 298 -14 2282 103 3 0 chr20 37553795 37554085 -34599797 - AluSg SINE Alu -19 291 1 409 285 111 64 chr20 37554099 37554334 -34599548 - L1MC4a LINE L1 -1455 6353 6108 309 200 183 78 chr20 37554926 37555121 -34598761 - L2 LINE L2 -339 2975 2751 2434 87 3 0 chr20 37555121 37555419 -34598463 - AluSp SINE Alu -14 299 1 309 200 183 78 chr20 37555419 37555453 -34598429 - L2 LINE L2 -563 2751 2722 515 132 0 0 chr20 37557347 37557423 -34596459 + AluJ/FLAM SINE Alu 9 84 -228 1928 132 64 10 chr20 37557536 37557832 -34596050 - AluSx SINE Alu 0 312 1 564 199 83 13 chr20 37557832 37557988 -34595894 - Charlie5 DNA MER1_type -205 2407 2241 375 118 79 0 chr20 37557987 37558063 -34595819 - Charlie5 DNA MER1_type -2488 124 43 * 303 253 50 30 chr20 37558117 37558211 -34595671 - HAL1 LINE L1 -344 2163 2067 2470 94 0 0 chr20 37558211 37558510 -34595372 - AluSq SINE Alu -14 299 1 304 243 27 14 chr20 37558521 37558595 -34595287 - HAL1 LINE L1 -810 1697 1623 882 213 18 73 chr20 37558603 37558781 -34595101 + MLT1C LTR MaLR 8 166 -301 2277 103 3 3 chr20 37558781 37559073 -34594809 + AluSq SINE Alu 1 292 -21 882 213 18 73 chr20 37559073 37559151 -34594731 + MLT1C LTR MaLR 166 248 -219 1486 124 66 12 chr20 37559151 37559409 -34594473 - MER66B LTR ERV1 0 486 215 283 208 94 83 chr20 37559405 37559501 -34594381 - AluJ/FLAM SINE Alu -226 76 1 * 260 288 78 58 chr20 37559505 37559710 -34594172 - LTR67 LTR ERVL 0 557 349 483 263 7 2 chr20 37559719 37559855 -34594027 + MLT1H LTR MaLR 1 174 -375 1961 173 0 10 chr20 37559856 37560163 -34593719 + AluJo SINE Alu 2 305 -7 288 337 54 65 chr20 37560164 37560425 -34593457 + L1MEd LINE L1 307 564 -5555 1805 113 12 110 chr20 37561137 37561464 -34592418 - AluJb SINE Alu -17 295 1 297 243 189 36 chr20 37563287 37563398 -34590484 + L2 LINE L2 3185 3312 -1 2376 103 0 3 chr20 37563416 37563716 -34590166 - AluSx SINE Alu -13 299 1 2246 100 0 17 chr20 37563722 37564062 -34589820 - AluSq SINE Alu 0 313 1 526 310 91 33 chr20 37564073 37564262 -34589620 + L2 LINE L2 2204 2381 -933 2278 113 0 13 chr20 37564262 37564572 -34589310 - AluSx SINE Alu -6 306 1 526 310 91 33 chr20 37564572 37564672 -34589210 + L2 LINE L2 2381 2474 -840 1548 188 30 17 chr20 37564672 37564838 -34589044 - AluSx SINE Alu -10 302 129 2109 138 0 7 chr20 37564838 37565142 -34588740 - AluSx SINE Alu -5 307 6 1548 188 30 17 chr20 37565142 37565273 -34588609 - AluSx SINE Alu -183 129 1 526 310 91 33 chr20 37565273 37565346 -34588536 + L2 LINE L2 2474 2588 -726 455 200 17 165 chr20 37565543 37565619 -34588263 + L1MD3 LINE L1 7800 7886 -109 2287 92 10 16 chr20 37565619 37565923 -34587959 + AluSp SINE Alu 1 302 -11 455 200 17 165 chr20 37565923 37565971 -34587911 + L1MD3 LINE L1 7886 7939 -56 1757 149 61 10 chr20 37565971 37566083 -34587799 + AluJo SINE Alu 1 106 -206 423 0 0 0 chr20 37566083 37566130 -34587752 + (CA)n Simple_repeat Simple_repeat 2 48 0 1757 149 61 10 chr20 37566130 37566312 -34587570 + AluJo SINE Alu 106 310 -2 455 200 17 165 chr20 37566312 37566416 -34587466 + L1MD3 LINE L1 7939 7995 0 1122 154 97 15 chr20 37566422 37566617 -34587265 + AluJo SINE Alu 84 294 -18 2255 116 0 0 chr20 37566678 37566972 -34586910 - AluSc SINE Alu -15 294 1 2345 116 3 0 chr20 37567042 37567344 -34586538 + AluSx SINE Alu 1 303 -9 279 0 0 0 chr20 37567344 37567358 -34586524 + (TG)n Simple_repeat Simple_repeat 1 45 0 279 0 0 0 chr20 37567358 37567389 -34586493 + (TG)n Simple_repeat Simple_repeat 2 32 0 1316 112 18 22 chr20 37567426 37567453 -34586429 - L1PA10 LINE L1 -8 6160 6134 2217 100 20 17 chr20 37567453 37567754 -34586128 + AluSc SINE Alu 1 302 -7 1316 112 18 22 chr20 37567754 37567949 -34585933 - L1PA10 LINE L1 -34 6134 5939 298 143 0 0 chr20 37567969 37568018 -34585864 - L1MB7 LINE L1 -98 6086 6038 823 225 24 89 chr20 37568130 37568440 -34585442 - L1MEd LINE L1 -4884 1235 1004 2254 108 10 3 chr20 37568440 37568736 -34585146 - AluSx SINE Alu -14 298 1 823 225 24 89 chr20 37568736 37568828 -34585054 - L1MEd LINE L1 -5115 1004 908 1171 75 20 0 chr20 37568845 37568992 -34584890 - AluSg/x SINE Alu -14 298 149 255 134 152 0 chr20 37568996 37569062 -34584820 + MIR SINE MIR 88 145 -63 2173 125 0 0 chr20 37569072 37569360 -34584522 + AluSx SINE Alu 9 296 -16 829 138 0 43 chr20 37569747 37569885 -34583997 - FLAM_A SINE Alu -1 132 1 2124 116 10 3 chr20 37569945 37570238 -34583644 + AluSx SINE Alu 1 295 -17 2198 116 0 3 chr20 37570289 37570582 -34583300 - AluSg SINE Alu -18 292 1 193 73 24 24 chr20 37570604 37570645 -34583237 + (TTA)n Simple_repeat Simple_repeat 1 41 0 2322 81 0 56 chr20 37570680 37571003 -34582879 - AluSg SINE Alu -5 305 1 209 350 70 0 chr20 37571004 37571104 -34582778 + L2 LINE L2 3152 3258 -14 2170 116 0 26 chr20 37571156 37571181 -34582701 - AluSq SINE Alu 0 313 289 225 30 30 0 chr20 37571181 37571214 -34582668 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2170 116 0 26 chr20 37571214 37571498 -34582384 - AluSq SINE Alu -24 289 1 2020 124 0 39 chr20 37571498 37571805 -34582077 - AluSx SINE Alu -15 297 3 619 227 149 7 chr20 37571899 37572053 -34581829 - MER5A DNA MER1_type -1 188 13 209 188 29 14 chr20 37572324 37572340 -34581542 + (TA)n Simple_repeat Simple_repeat 1 15 -55 2682 44 0 22 chr20 37572340 37572658 -34581224 - AluY SINE Alu 0 311 1 209 188 29 14 chr20 37572658 37572710 -34581172 + (TA)n Simple_repeat Simple_repeat 15 70 0 334 284 64 84 chr20 37572712 37573008 -34580874 - L1MCa LINE L1 -4215 2211 1922 * 362 200 41 117 chr20 37572826 37573074 -34580808 + L1MCa LINE L1 1922 2081 -4345 26 0 0 0 chr20 37573074 37573100 -34580782 + AT_rich Low_complexity Low_complexity 1 26 0 395 136 0 0 chr20 37573117 37573176 -34580706 - AluJo SINE Alu -20 282 224 492 198 94 158 chr20 37573335 37573663 -34580219 + MER51A LTR ERV1 328 634 0 1217 149 79 23 chr20 37573684 37573767 -34580115 - AluJo SINE Alu -86 226 149 2097 127 0 3 chr20 37573767 37574058 -34579824 - AluSx SINE Alu -4 308 19 1217 149 79 23 chr20 37574058 37574188 -34579694 - AluJo SINE Alu -163 149 1 360 295 100 34 chr20 37574191 37574464 -34579418 - L1MC4a LINE L1 -328 5826 5636 407 265 34 8 chr20 37574891 37575008 -34578874 + MIR SINE MIR 30 149 -113 390 259 102 0 chr20 37575062 37575170 -34578712 - MER5A DNA MER1_type -70 119 1 301 271 24 0 chr20 37576463 37576548 -34577334 - MIR SINE MIR -71 137 51 297 277 277 13 chr20 37576773 37576932 -34576950 + MIR SINE MIR 19 219 -43 370 214 168 23 chr20 37577110 37577241 -34576641 - L2 LINE L2 -789 2525 2376 749 199 13 0 chr20 37577264 37577415 -34576467 - MLT1F LTR MaLR -2 540 388 470 17 17 0 chr20 37577441 37577500 -34576382 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 2215 92 0 7 chr20 37577500 37577782 -34576100 - AluSc SINE Alu -29 280 1 2301 99 20 0 chr20 37578234 37578536 -34575346 - AluSx SINE Alu -3 309 2 1548 176 62 62 chr20 37578537 37578710 -34575172 - MLT1F LTR MaLR -201 341 166 2307 97 0 29 chr20 37578710 37579021 -34574861 + AluSq SINE Alu 1 302 -11 1548 176 62 62 chr20 37579021 37579188 -34574694 - MLT1F LTR MaLR -375 167 1 1402 238 459 5 chr20 37579197 37580399 -34573483 - L2 LINE L2 -932 2382 635 403 294 61 25 chr20 37580489 37580652 -34573230 + MIR SINE MIR 91 259 -3 223 260 65 39 chr20 37580669 37580746 -34573136 + MIR SINE MIR 183 261 -1 273 292 226 26 chr20 37581175 37581370 -34572512 + MIR SINE MIR 13 246 -16 241 167 0 0 chr20 37581413 37581455 -34572427 - MER5A DNA MER1_type -85 104 63 715 162 49 0 chr20 37581461 37581603 -34572279 - L1MB4 LINE L1 0 6180 6032 921 137 0 34 chr20 37581632 37581778 -34572104 + FLAM_C SINE Alu 3 143 0 658 301 22 0 chr20 37582436 37582619 -34571263 + MIR SINE MIR 2 188 -74 347 239 146 31 chr20 37582718 37582848 -34571034 + MIR SINE MIR 48 192 -70 321 185 261 25 chr20 37582870 37582989 -34570893 - L2 LINE L2 0 3313 3167 235 264 19 0 chr20 37582993 37583046 -34570836 + Tigger5 DNA MER2_type 2 55 -2268 499 110 0 130 chr20 37583046 37583075 -34570807 + Tigger5 DNA MER2_type 2237 2268 -55 2413 104 0 0 chr20 37583075 37583374 -34570508 - AluSx SINE Alu -13 299 1 499 110 0 130 chr20 37583374 37583444 -34570438 + Tigger5 DNA MER2_type 2268 2323 0 5574 256 131 36 chr20 37583445 37583771 -34570111 - L2 LINE L2 -157 3156 2863 2422 103 0 0 chr20 37583771 37584073 -34569809 + AluSx SINE Alu 1 302 -10 5574 256 131 36 chr20 37584073 37584467 -34569415 - L2 LINE L2 -450 2863 2508 2042 121 0 7 chr20 37584467 37584749 -34569133 + AluSx SINE Alu 21 300 -12 5574 256 131 36 chr20 37584749 37586458 -34567424 - L2 LINE L2 -805 2508 398 1526 157 91 21 chr20 37586458 37586744 -34567138 - AluJb SINE Alu 0 312 7 5574 256 131 36 chr20 37586744 37587184 -34566698 - L2 LINE L2 -2915 398 2 314 206 0 0 chr20 37587526 37587589 -34566293 - MIR SINE MIR -68 140 78 303 338 88 13 chr20 37588683 37589013 -34564869 - L2 LINE L2 -242 3030 2646 1149 127 30 0 chr20 37589126 37589291 -34564591 + AluSg/x SINE Alu 137 306 -6 275 209 0 45 chr20 37593486 37593553 -34560329 + G-rich Low_complexity Low_complexity 2 65 0 1313 223 58 69 chr20 37594565 37595044 -34558838 + MLT1K LTR MaLR 3 476 -112 2072 148 0 0 chr20 37595602 37595905 -34557977 + AluJb SINE Alu 1 303 -9 209 171 0 0 chr20 37596465 37596500 -34557382 + C-rich Low_complexity Low_complexity 1 35 0 1885 151 0 59 chr20 37596695 37597019 -34556863 + AluJb SINE Alu 4 308 -4 235 250 29 44 chr20 37597633 37597701 -34556181 - MIR SINE MIR -93 169 103 2155 99 0 0 chr20 37597703 37597976 -34555906 + AluSx SINE Alu 1 273 -39 1267 101 12 0 chr20 37597976 37598145 -34555737 + AluSg/x SINE Alu 123 293 -17 401 88 0 44 chr20 37599123 37599191 -34554691 - AluJo SINE Alu -176 136 72 2406 97 3 0 chr20 37599191 37599500 -34554382 + AluSx SINE Alu 1 310 -2 628 176 0 32 chr20 37599539 37599664 -34554218 - FLAM_C SINE Alu -17 126 6 340 284 29 37 chr20 37599675 37599915 -34553967 - L1MCa LINE L1 -810 1977 1537 682 175 0 16 chr20 37599927 37600053 -34553829 - FLAM_A SINE Alu -5 128 5 227 218 30 113 chr20 37600074 37600100 -34553782 + L2 LINE L2 3113 3140 -173 2431 112 0 0 chr20 37600100 37600412 -34553470 - AluSx SINE Alu 0 312 1 227 218 30 113 chr20 37600412 37600518 -34553364 + L2 LINE L2 3140 3234 -79 1983 130 24 10 chr20 37600615 37600907 -34552975 + AluJb SINE Alu 1 296 -16 2310 206 82 0 chr20 37600913 37601590 -34552292 + L1M3 LINE L1 4737 5466 -714 2520 74 0 3 chr20 37601597 37601907 -34551975 - AluSg SINE Alu -1 309 1 2412 104 0 0 chr20 37601937 37602245 -34551637 + AluSx SINE Alu 1 308 -4 608 290 73 51 chr20 37602245 37602560 -34551322 + L2 LINE L2 2706 3024 -289 902 195 25 0 chr20 37602560 37602719 -34551163 - AluJb SINE Alu -30 282 120 487 80 340 20 chr20 37602736 37602836 -34551046 + FLAM_C SINE Alu 2 133 0 497 201 7 171 chr20 37602891 37602976 -34550906 + L2 LINE L2 3083 3180 -133 2006 113 7 52 chr20 37602976 37603286 -34550596 - AluSp SINE Alu -17 296 1 497 201 7 171 chr20 37603286 37603445 -34550437 + L2 LINE L2 3180 3282 -31 2443 60 40 3 chr20 37603445 37603743 -34550139 + AluSp SINE Alu 1 309 -4 497 201 7 171 chr20 37603743 37603766 -34550116 + L2 LINE L2 3282 3307 -6 297 314 145 4 chr20 37603766 37604008 -34549874 - L1M4 LINE L1 -2424 3722 3447 2030 135 7 3 chr20 37604008 37604297 -34549585 + AluSx SINE Alu 1 290 -22 558 149 45 82 chr20 37604319 37604418 -34549464 - AluJo SINE Alu -80 232 138 2242 119 6 6 chr20 37604418 37604729 -34549153 - AluSx SINE Alu -1 311 1 558 149 45 82 chr20 37604729 37604763 -34549119 - AluJo SINE Alu -174 138 104 2102 120 0 17 chr20 37604763 37605063 -34548819 + AluSg SINE Alu 1 295 -15 2571 215 104 44 chr20 37605064 37605669 -34548213 + L1M4b LINE L1 805 1372 -5483 507 113 0 0 chr20 37605669 37605749 -34548133 + (TATG)n Simple_repeat Simple_repeat 2 81 0 2574 59 7 0 chr20 37605749 37606053 -34547829 - AluY SINE Alu -5 306 1 2571 215 104 44 chr20 37606053 37606184 -34547698 + L1M4b LINE L1 1372 1494 -5361 2194 104 10 10 chr20 37606184 37606482 -34547400 - AluY SINE Alu -13 298 1 2571 215 104 44 chr20 37606482 37606745 -34547137 + L1M4b LINE L1 1494 1858 -4997 2249 112 3 0 chr20 37607005 37607301 -34546581 - AluSq SINE Alu -16 297 1 466 221 121 21 chr20 37607307 37607447 -34546435 + MIR SINE MIR 107 260 -2 2341 106 0 0 chr20 37607447 37607749 -34546133 + AluSg SINE Alu 1 302 -8 1181 119 6 17 chr20 37607749 37607925 -34545957 + AluSg/x SINE Alu 134 307 -5 198 0 0 0 chr20 37607951 37607973 -34545909 + (A)n Simple_repeat Simple_repeat 1 22 0 380 314 51 0 chr20 37608505 37608623 -34545259 - L2 LINE L2 0 3313 3190 430 253 123 19 chr20 37608685 37608847 -34545035 - MIR3 SINE MIR -15 193 15 2094 49 111 28 chr20 37609555 37609843 -34544039 + AluSx SINE Alu 1 312 0 2397 82 3 10 chr20 37610031 37610334 -34543548 + AluSx SINE Alu 1 301 -11 210 286 0 0 chr20 37610507 37610556 -34543326 - L2 LINE L2 -1 3312 3264 296 281 67 0 chr20 37610634 37610723 -34543159 - L2 LINE L2 -240 3073 2979 22 0 0 0 chr20 37610736 37610758 -34543124 + AT_rich Low_complexity Low_complexity 1 22 0 4608 135 77 47 chr20 37610760 37610804 -34543078 - L1MA8 LINE L1 -2 6289 6248 2307 114 3 0 chr20 37610804 37611111 -34542771 - AluSq SINE Alu -1 312 5 4608 135 77 47 chr20 37611111 37611287 -34542595 - L1MA8 LINE L1 -43 6248 6079 2231 61 8 0 chr20 37611287 37611550 -34542332 - AluSp SINE Alu -14 299 35 4608 135 77 47 chr20 37611550 37611764 -34542118 - L1MA8 LINE L1 -212 6079 5873 2289 119 7 0 chr20 37611764 37612067 -34541815 - AluSp SINE Alu -8 305 1 4608 135 77 47 chr20 37612067 37612121 -34541761 - L1MA8 LINE L1 -418 5873 5822 2204 135 0 0 chr20 37612121 37612417 -34541465 - AluSx SINE Alu -16 296 1 4608 135 77 47 chr20 37612417 37612448 -34541434 - L1MA8 LINE L1 -469 5822 5793 2446 98 3 0 chr20 37612448 37612754 -34541128 - AluSc SINE Alu -2 307 1 4608 135 77 47 chr20 37612754 37613483 -34540399 - L1MA8 LINE L1 -498 5793 4978 1822 171 0 27 chr20 37613483 37613782 -34540100 - AluJo SINE Alu -21 291 1 4608 135 77 47 chr20 37613782 37613980 -34539902 - L1MA8 LINE L1 -1313 4978 4787 1063 106 0 20 chr20 37614079 37614230 -34539652 + AluJb SINE Alu 1 148 -164 2196 93 0 0 chr20 37614236 37614505 -34539377 - AluSg SINE Alu -41 269 1 680 159 0 0 chr20 37614517 37614630 -34539252 - FLAM_A SINE Alu -21 121 9 1863 155 3 14 chr20 37614696 37614987 -34538895 + AluJb SINE Alu 1 288 -24 23 0 0 0 chr20 37614994 37615017 -34538865 + AT_rich Low_complexity Low_complexity 1 23 0 2345 106 0 0 chr20 37615027 37615339 -34538543 - AluSx SINE Alu 0 312 1 278 352 19 0 chr20 37615392 37615497 -34538385 - L2 LINE L2 -2911 403 297 734 197 0 0 chr20 37615769 37615901 -34537981 + AluJo/FLAM SINE Alu 2 133 -179 423 100 143 0 chr20 37615901 37615971 -34537911 - AluY SINE Alu -17 294 215 1882 155 13 35 chr20 37615971 37616185 -34537697 + L1MB8 LINE L1 5568 5772 -406 2208 80 23 30 chr20 37616185 37616485 -34537397 + AluSq SINE Alu 1 298 -15 1882 155 13 35 chr20 37616485 37616644 -34537238 + L1MB8 LINE L1 5772 5933 -245 345 381 102 10 chr20 37616650 37617054 -34536828 + L2 LINE L2 781 1221 -2093 1088 251 18 11 chr20 37617119 37617394 -34536488 - MLT1C LTR MaLR -3 464 188 2375 105 3 0 chr20 37617410 37617714 -34536168 - AluSg SINE Alu -5 305 1 230 290 30 20 chr20 37617714 37617804 -34536078 + L2 LINE L2 2527 2620 -694 274 257 100 70 chr20 37617831 37617962 -34535920 - L2 LINE L2 -343 2971 2845 2585 62 0 0 chr20 37617962 37618267 -34535615 + AluY SINE Alu 1 305 -6 274 257 100 70 chr20 37618267 37618335 -34535547 - L2 LINE L2 -469 2845 2781 189 0 0 0 chr20 37618335 37618356 -34535526 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 274 257 100 70 chr20 37618356 37618418 -34535464 - L2 LINE L2 -533 2781 2661 2157 100 28 0 chr20 37618651 37618942 -34534940 + AluSx SINE Alu 14 312 0 230 167 33 50 chr20 37619554 37619614 -34534268 - MIR SINE MIR -11 251 193 475 241 163 14 chr20 37621467 37621608 -34532274 + MER5A DNA MER1_type 28 189 0 4489 176 53 9 chr20 37622385 37623201 -34530681 + MER21B LTR ERV1 1 852 -11 1903 81 231 191 chr20 37623680 37624239 -34529643 + LTR12 LTR ERV1 1 581 -133 22 0 0 0 chr20 37624312 37624334 -34529548 + AT_rich Low_complexity Low_complexity 1 22 0 598 258 0 20 chr20 37625104 37625255 -34528627 - L1ME3 LINE L1 -3 6159 6012 253 295 54 18 chr20 37625277 37625389 -34528493 - MIR3 SINE MIR -39 169 54 1363 151 137 7 chr20 37625389 37625674 -34528208 + MER33 DNA MER1_type 1 322 -2 425 258 93 33 chr20 37625703 37625854 -34528028 + L2 LINE L2 3154 3313 0 21 0 0 0 chr20 37625973 37625994 -34527888 + AT_rich Low_complexity Low_complexity 1 21 0 1994 76 4 4 chr20 37626063 37626348 -34527534 - AluY SINE Alu 0 317 33 1733 173 3 7 chr20 37626350 37626645 -34527237 - AluJb SINE Alu -17 295 2 1141 328 83 12 chr20 37626836 37627327 -34526555 + L3 LINE CR1 624 1149 -428 1702 177 18 0 chr20 37627407 37627714 -34526168 + AluJb SINE Alu 1 312 0 1002 176 12 24 chr20 37627818 37627983 -34525899 - FRAM SINE Alu -3 163 1 2129 116 10 0 chr20 37628106 37628398 -34525484 + AluSx SINE Alu 1 295 -17 2180 116 0 7 chr20 37628450 37628753 -34525129 + AluSx SINE Alu 1 301 -11 2279 117 0 3 chr20 37628800 37629100 -34524782 + AluSx SINE Alu 1 299 -13 248 342 71 71 chr20 37629573 37630026 -34523856 - L2 LINE L2 -4 3268 2816 627 162 20 0 chr20 37630218 37630317 -34523565 + Tigger3(Golem) DNA MER2_type 2 102 -2927 3399 130 112 60 chr20 37630320 37630377 -34523505 + Tigger3(Golem) DNA MER2_type 2287 2340 -689 1721 167 20 10 chr20 37630377 37630671 -34523211 - AluJo SINE Alu -15 297 1 3399 130 112 60 chr20 37630671 37630812 -34523070 + Tigger3(Golem) DNA MER2_type 2340 2472 -557 2168 113 24 0 chr20 37630812 37631103 -34522779 + AluSx SINE Alu 1 298 -14 3399 130 112 60 chr20 37631103 37631200 -34522682 + Tigger3(Golem) DNA MER2_type 2472 2562 -467 1771 183 3 7 chr20 37631200 37631495 -34522387 + AluJb SINE Alu 1 294 -18 3399 130 112 60 chr20 37631495 37631903 -34521979 + Tigger3(Golem) DNA MER2_type 2562 3029 0 2449 73 3 0 chr20 37632083 37632386 -34521496 - AluY SINE Alu -7 304 1 1337 125 19 5 chr20 37632471 37632687 -34521195 - MER6 DNA MER2_type -2 863 645 1309 198 0 8 chr20 37632696 37632933 -34520949 - MER6 DNA MER2_type -629 236 2 2017 145 0 16 chr20 37633576 37633880 -34520002 - AluJb SINE Alu -13 299 1 867 264 44 26 chr20 37634177 37634404 -34519478 - MIR SINE MIR -4 258 28 1961 151 16 13 chr20 37634794 37634930 -34518952 + AluJb SINE Alu 1 135 -177 2259 87 7 0 chr20 37634930 37635219 -34518663 + AluSx SINE Alu 1 291 -21 1961 151 16 13 chr20 37635219 37635393 -34518489 + AluJb SINE Alu 135 312 0 2343 97 0 7 chr20 37635763 37636072 -34517810 + AluSq SINE Alu 1 307 -6 2076 102 0 0 chr20 37636286 37636551 -34517331 - AluSq SINE Alu -48 265 1 227 287 101 36 chr20 37636923 37637055 -34516827 - MIR SINE MIR -62 146 27 189 236 0 55 chr20 37638470 37638525 -34515357 + L2 LINE L2 3210 3261 -11 300 303 106 0 chr20 37638647 37638779 -34515103 + MIR3 SINE MIR 59 204 -4 446 239 30 67 chr20 37638939 37639073 -34514809 + L2 LINE L2 2949 3077 -195 336 296 62 51 chr20 37639357 37639533 -34514349 + MIR SINE MIR 37 214 -48 349 303 27 0 chr20 37639785 37639908 -34513974 - L2 LINE L2 -221 3051 2929 2104 122 3 7 chr20 37640046 37640350 -34513532 - AluSx SINE Alu -9 303 1 198 150 0 0 chr20 37640393 37640433 -34513449 + (TG)n Simple_repeat Simple_repeat 2 41 0 352 168 148 50 chr20 37640499 37640600 -34513282 - MER112 DNA MER1_type -12 248 138 * 675 97 8 73 chr20 37640597 37640721 -34513161 + LTR9B LTR ERV1 445 560 -84 316 252 97 26 chr20 37640729 37640884 -34512998 - MER112 DNA MER1_type -83 177 12 357 364 41 5 chr20 37641743 37641938 -34511944 + L2 LINE L2 2844 3045 -227 22 0 0 0 chr20 37642510 37642532 -34511350 + AT_rich Low_complexity Low_complexity 1 22 0 273 290 0 29 chr20 37642920 37642989 -34510893 + L2 LINE L2 3107 3173 -99 2049 147 0 6 chr20 37643064 37643377 -34510505 + AluSx SINE Alu 1 311 -1 2343 105 0 0 chr20 37644507 37644813 -34509069 + AluSx SINE Alu 5 310 -2 622 236 50 7 chr20 37644828 37644968 -34508914 + MIR3 SINE MIR 38 183 -25 1905 171 0 3 chr20 37645168 37645477 -34508405 + AluJb SINE Alu 1 308 -4 775 275 20 59 chr20 37645946 37646215 -34507667 - MIR SINE MIR 0 262 6 466 288 84 28 chr20 37646230 37646445 -34507437 - MIR SINE MIR -6 256 30 531 291 108 25 chr20 37647223 37647464 -34506418 + MIR SINE MIR 2 262 0 692 129 147 0 chr20 37647922 37648038 -34505844 - FLAM_C SINE Alu 0 133 1 21 57 0 0 chr20 37648468 37648503 -34505379 + AT_rich Low_complexity Low_complexity 1 35 0 267 301 150 26 chr20 37648542 37648655 -34505227 + MIR SINE MIR 1 127 -135 2204 95 27 7 chr20 37649027 37649323 -34504559 - AluSx SINE Alu -10 302 1 213 39 0 0 chr20 37649387 37649413 -34504469 + (A)n Simple_repeat Simple_repeat 1 26 0 1491 164 30 56 chr20 37649415 37649719 -34504163 + AluJo SINE Alu 1 296 -16 2381 92 10 7 chr20 37649721 37650027 -34503855 + AluSg SINE Alu 1 307 -3 1674 153 3 47 chr20 37650271 37650572 -34503310 + AluSx SINE Alu 1 288 -24 264 265 51 31 chr20 37650873 37650971 -34502911 + L1ME LINE L1 5531 5630 -491 21 36 0 0 chr20 37651005 37651033 -34502849 + AT_rich Low_complexity Low_complexity 1 28 0 2195 109 0 29 chr20 37651088 37651399 -34502483 + AluSx SINE Alu 1 302 -10 732 181 0 31 chr20 37651580 37651707 -34502175 + FLAM_A SINE Alu 1 123 -10 318 206 0 0 chr20 37652587 37652650 -34501232 + L1ME3 LINE L1 6098 6160 -2 2344 207 29 92 chr20 37653243 37653360 -34500522 + L1M4 LINE L1 3075 3198 -2948 1848 160 16 10 chr20 37653360 37653667 -34500215 + AluJb SINE Alu 1 309 -3 2344 207 29 92 chr20 37653667 37653735 -34500147 + L1M4 LINE L1 3198 3269 -2877 2102 88 18 0 chr20 37653735 37654009 -34499873 + AluSx SINE Alu 14 292 -20 2344 207 29 92 chr20 37654009 37654374 -34499508 + L1M4 LINE L1 3269 3555 -2591 2174 96 45 0 chr20 37654374 37654695 -34499187 + AluSc SINE Alu 1 309 0 2344 207 29 92 chr20 37654695 37655003 -34498879 + L1M4 LINE L1 3555 3881 -2265 490 246 25 17 chr20 37655197 37655315 -34498567 - L2 LINE L2 -5 3308 3190 2266 73 0 57 chr20 37656023 37656337 -34497545 + AluSg SINE Alu 1 296 -14 855 263 177 28 chr20 37656337 37656733 -34497149 - L3 LINE CR1 -20 1557 1103 2107 115 0 7 chr20 37657213 37657534 -34496348 + AluSx SINE Alu 1 319 0 1128 190 77 9 chr20 37658470 37658691 -34495191 - MER46A DNA MER2_type 0 236 1 949 122 0 186 chr20 37659261 37659498 -34494384 - 7SK RNA RNA 0 193 1 1669 149 0 118 chr20 37659801 37660130 -34493752 - AluJo SINE Alu -10 292 3 2571 48 10 3 chr20 37660192 37660501 -34493381 - AluY SINE Alu 0 311 1 826 156 12 75 chr20 37661115 37661275 -34492607 + FRAM SINE Alu 5 154 -12 1525 181 4 7 chr20 37661285 37661555 -34492327 + AluJo SINE Alu 27 295 -17 322 177 13 63 chr20 37661564 37661643 -34492239 + MIR SINE MIR 67 141 -67 317 254 0 0 chr20 37661971 37662034 -34491848 + L2 LINE L2 3250 3312 -1 1663 180 3 26 chr20 37662050 37662355 -34491527 + AluJo SINE Alu 1 298 -14 2230 116 10 3 chr20 37662378 37662688 -34491194 + AluSx SINE Alu 1 312 0 215 219 219 0 chr20 37662874 37662947 -34490935 + MIR SINE MIR 161 249 -13 1671 158 3 58 chr20 37663181 37663511 -34490371 - AluJb SINE Alu 0 312 1 1072 182 27 31 chr20 37663523 37663748 -34490134 - L1MC1 LINE L1 0 6333 6110 2110 123 0 28 chr20 37664686 37665004 -34488878 + AluSx SINE Alu 1 309 -3 189 325 87 79 chr20 37665069 37665195 -34488687 + L2 LINE L2 3126 3252 -20 348 293 8 24 chr20 37665226 37665349 -34488533 + L3b LINE CR1 1112 1232 -351 416 281 0 0 chr20 37665380 37665476 -34488406 - MIR3 SINE MIR -24 184 89 239 321 37 43 chr20 37665570 37665671 -34488211 - MIR SINE MIR 0 262 162 2055 126 13 7 chr20 37665671 37665973 -34487909 - AluSx SINE Alu -8 304 1 1753 165 47 3 chr20 37665979 37666276 -34487606 - AluJo SINE Alu 0 312 3 239 321 37 43 chr20 37666276 37666329 -34487553 - MIR SINE MIR -105 157 102 1538 171 127 109 chr20 37666425 37666483 -34487399 + L1MC4a LINE L1 6675 6731 -1077 2248 109 3 6 chr20 37666483 37666794 -34487088 + AluSx SINE Alu 1 310 -2 1538 171 127 109 chr20 37666794 37667019 -34486863 + L1MC4a LINE L1 6731 6951 -857 1778 106 4 4 chr20 37667019 37667293 -34486589 + AluSg SINE Alu 37 310 0 1538 171 127 109 chr20 37667293 37667340 -34486542 + L1MC4a LINE L1 6951 6996 -812 216 67 0 0 chr20 37667340 37667370 -34486512 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1538 171 127 109 chr20 37667370 37667493 -34486389 + L1MC4a LINE L1 6996 7139 -669 * 2381 135 89 61 chr20 37667489 37667844 -34486038 + L1MB2 LINE L1 5604 5980 -191 2301 88 14 0 chr20 37667844 37668138 -34485744 + AluSx SINE Alu 1 298 -14 2381 135 89 61 chr20 37668138 37668309 -34485573 + L1MB2 LINE L1 5980 6145 -26 2307 174 92 96 chr20 37668322 37668621 -34485261 + L1MC4a LINE L1 7126 7425 -383 2068 133 7 0 chr20 37668621 37668921 -34484961 + AluSx SINE Alu 9 310 -2 2307 174 92 96 chr20 37668921 37669039 -34484843 + L1MC4a LINE L1 7425 7542 -266 1785 150 6 45 chr20 37669039 37669352 -34484530 + AluSx SINE Alu 1 301 -11 2307 174 92 96 chr20 37669352 37669619 -34484263 + L1MC4a LINE L1 7542 7808 0 444 336 22 22 chr20 37669694 37669926 -34483956 - L3 LINE CR1 -5 1572 1341 296 253 40 13 chr20 37670100 37670175 -34483707 + L2 LINE L2 3227 3303 -10 244 254 60 0 chr20 37670360 37670427 -34483455 - L2 LINE L2 -1 3271 3201 25 0 0 0 chr20 37670507 37670532 -34483350 + AT_rich Low_complexity Low_complexity 1 25 0 234 161 18 89 chr20 37670822 37670878 -34483004 + L1ME LINE L1 5529 5580 -590 492 72 0 0 chr20 37671163 37671232 -34482650 + (CA)n Simple_repeat Simple_repeat 2 70 0 1195 215 35 92 chr20 37671973 37672341 -34481541 + MER21B LTR ERV1 1 347 -516 2147 236 82 33 chr20 37672369 37672999 -34480883 - MER21B LTR ERV1 -60 803 143 602 157 28 19 chr20 37673053 37673161 -34480721 + FLAM_C SINE Alu 17 125 -18 25 0 0 0 chr20 37673194 37673219 -34480663 + AT_rich Low_complexity Low_complexity 1 25 0 428 133 78 78 chr20 37673230 37673320 -34480562 - MER21B LTR ERV1 -773 90 1 2101 158 0 0 chr20 37673678 37673982 -34479900 - AluSx SINE Alu -8 304 1 1010 155 6 39 chr20 37673989 37674170 -34479712 - FAM SINE Alu 0 175 1 397 174 14 0 chr20 37674672 37674741 -34479141 - MER2 DNA MER2_type 0 345 276 1255 108 5 16 chr20 37674742 37674928 -34478954 + AluSg/x SINE Alu 129 312 0 2554 61 7 3 chr20 37674931 37675241 -34478641 + AluY SINE Alu 1 311 0 1389 176 52 4 chr20 37675243 37675510 -34478372 - MER2 DNA MER2_type -65 280 1 197 281 146 0 chr20 37675511 37675600 -34478282 + MIR SINE MIR 32 133 -75 866 251 48 4 chr20 37675603 37675834 -34478048 - MIR SINE MIR 0 262 22 261 258 91 0 chr20 37675828 37675894 -34477988 + MIR3 SINE MIR 126 197 -11 * 371 244 104 0 chr20 37676724 37676839 -34477043 + MIR SINE MIR 57 183 -79 2286 98 3 7 chr20 37677268 37677575 -34476307 + AluSx SINE Alu 1 306 -6 2222 122 0 0 chr20 37677620 37677915 -34475967 - AluSx SINE Alu -12 300 6 2579 63 0 0 chr20 37678186 37678489 -34475393 - AluY SINE Alu -8 303 1 3048 203 26 3 chr20 37678720 37679335 -34474547 + MER82 DNA MER2_type 24 652 -1 2540 76 3 0 chr20 37679353 37679655 -34474227 - AluSp SINE Alu -10 303 1 2056 121 3 29 chr20 37679855 37679991 -34473891 + AluSx SINE Alu 1 139 -173 2490 56 0 0 chr20 37679991 37680302 -34473580 + AluY SINE Alu 1 311 0 194 0 39 0 chr20 37680302 37680328 -34473554 + (TA)n Simple_repeat Simple_repeat 1 27 0 2056 121 3 29 chr20 37680328 37680495 -34473387 + AluSx SINE Alu 137 298 -14 1925 118 0 7 chr20 37680500 37680770 -34473112 + AluSx SINE Alu 31 298 -14 989 211 176 9 chr20 37680851 37681187 -34472695 + L1MC4 LINE L1 6462 6853 -1189 4378 40 0 24 chr20 37681226 37681641 -34472241 + L1PA5 LINE L1 5622 6022 -132 2416 56 0 43 chr20 37681641 37681785 -34472097 + AluY SINE Alu 1 127 -184 2429 45 42 3 chr20 37681785 37682074 -34471808 + AluY SINE Alu 1 300 -11 2416 56 0 43 chr20 37682074 37682233 -34471649 + AluY SINE Alu 127 291 -20 4378 40 0 24 chr20 37682233 37682360 -34471522 + L1PA5 LINE L1 6022 6151 -3 4865 189 91 74 chr20 37682385 37683289 -34470593 + L1MB3 LINE L1 335 1222 -5424 2040 74 0 0 chr20 37683289 37683532 -34470350 + AluSq SINE Alu 1 243 -70 4865 189 91 74 chr20 37683532 37684673 -34469209 + L1MB3 LINE L1 1222 2487 -4159 892 252 59 0 chr20 37684680 37684826 -34469056 + L1MB3 LINE L1 5471 5607 -1037 2094 140 6 19 chr20 37684826 37685141 -34468741 + AluSx SINE Alu 1 311 -1 892 252 59 0 chr20 37685141 37685284 -34468598 + L1MB3 LINE L1 5607 5777 -867 1019 126 0 0 chr20 37685285 37685420 -34468462 + AluSq/x SINE Alu 2 136 -177 2297 102 3 0 chr20 37685421 37685715 -34468167 + AluSp SINE Alu 1 295 -18 1213 179 5 5 chr20 37685716 37685827 -34468055 + L1MB3 LINE L1 5879 5989 -692 1847 193 3 0 chr20 37685827 37686138 -34467744 + AluJo SINE Alu 1 312 0 1213 179 5 5 chr20 37686138 37686249 -34467633 + L1MB3 LINE L1 5988 6101 -580 2001 148 3 10 chr20 37686251 37686556 -34467326 + AluJo SINE Alu 1 303 -9 1970 136 20 31 chr20 37686556 37686867 -34467015 + L1MB3 LINE L1 6326 6634 -47 2374 100 0 3 chr20 37686867 37687167 -34466715 + AluSq SINE Alu 1 299 -14 1970 136 20 31 chr20 37687167 37687208 -34466674 + L1MB3 LINE L1 6634 6674 -7 2239 112 3 0 chr20 37687490 37687786 -34466096 - AluSq SINE Alu -16 297 1 497 221 121 21 chr20 37687792 37687932 -34465950 + MIR SINE MIR 107 260 -2 2329 106 0 0 chr20 37687932 37688234 -34465648 + AluSg SINE Alu 1 302 -8 1176 119 6 17 chr20 37688234 37688410 -34465472 + AluSg/x SINE Alu 134 307 -5 198 0 0 0 chr20 37688436 37688458 -34465424 + (A)n Simple_repeat Simple_repeat 1 22 0 400 314 51 0 chr20 37688990 37689108 -34464774 - L2 LINE L2 0 3313 3190 471 247 123 19 chr20 37689170 37689332 -34464550 - MIR3 SINE MIR -15 193 15 2084 49 111 28 chr20 37690040 37690328 -34463554 + AluSx SINE Alu 1 312 0 2385 82 3 10 chr20 37690516 37690819 -34463063 + AluSx SINE Alu 1 301 -11 310 287 64 0 chr20 37691114 37691208 -34462674 - L2 LINE L2 -235 3078 2979 22 0 0 0 chr20 37691221 37691243 -34462639 + AT_rich Low_complexity Low_complexity 1 22 0 4623 134 77 47 chr20 37691245 37691289 -34462593 - L1MA8 LINE L1 -2 6289 6248 2302 114 3 0 chr20 37691289 37691596 -34462286 - AluSq SINE Alu -1 312 5 4623 134 77 47 chr20 37691596 37691772 -34462110 - L1MA8 LINE L1 -43 6248 6079 2222 61 8 0 chr20 37691772 37692035 -34461847 - AluSp SINE Alu -14 299 35 4623 134 77 47 chr20 37692035 37692249 -34461633 - L1MA8 LINE L1 -212 6079 5873 2279 119 7 0 chr20 37692249 37692552 -34461330 - AluSp SINE Alu -8 305 1 4623 134 77 47 chr20 37692552 37692606 -34461276 - L1MA8 LINE L1 -418 5873 5822 2196 135 0 0 chr20 37692606 37692902 -34460980 - AluSx SINE Alu -16 296 1 4623 134 77 47 chr20 37692902 37692933 -34460949 - L1MA8 LINE L1 -469 5822 5793 2441 98 3 0 chr20 37692933 37693239 -34460643 - AluSc SINE Alu -2 307 1 4623 134 77 47 chr20 37693239 37693968 -34459914 - L1MA8 LINE L1 -498 5793 4978 1820 171 0 27 chr20 37693968 37694267 -34459615 - AluJo SINE Alu -21 291 1 4623 134 77 47 chr20 37694267 37694465 -34459417 - L1MA8 LINE L1 -1313 4978 4787 1059 106 0 20 chr20 37694564 37694715 -34459167 + AluJb SINE Alu 1 148 -164 2181 93 0 0 chr20 37694721 37694990 -34458892 - AluSg SINE Alu -41 269 1 727 159 0 0 chr20 37695002 37695115 -34458767 - FLAM_A SINE Alu -21 121 9 1848 155 3 14 chr20 37695181 37695472 -34458410 + AluJb SINE Alu 1 288 -24 23 0 0 0 chr20 37695479 37695502 -34458380 + AT_rich Low_complexity Low_complexity 1 23 0 2324 106 0 0 chr20 37695512 37695824 -34458058 - AluSx SINE Alu 0 312 1 297 352 19 0 chr20 37695877 37695982 -34457900 - L2 LINE L2 -2911 403 297 786 197 0 0 chr20 37696254 37696386 -34457496 + AluJo/FLAM SINE Alu 2 133 -179 453 100 143 0 chr20 37696386 37696456 -34457426 - AluY SINE Alu -17 294 215 1880 155 13 35 chr20 37696456 37696670 -34457212 + L1MB8 LINE L1 5568 5772 -406 2196 80 23 30 chr20 37696670 37696970 -34456912 + AluSq SINE Alu 1 298 -15 1880 155 13 35 chr20 37696970 37697129 -34456753 + L1MB8 LINE L1 5772 5933 -245 384 352 120 26 chr20 37697135 37697553 -34456329 + L2 LINE L2 781 1237 -2077 1049 251 18 11 chr20 37697604 37697879 -34456003 - MLT1C LTR MaLR -3 464 188 2371 105 3 0 chr20 37697895 37698199 -34455683 - AluSg SINE Alu -5 305 1 247 290 30 20 chr20 37698199 37698289 -34455593 + L2 LINE L2 2527 2620 -694 326 256 90 77 chr20 37698300 37698447 -34455435 - L2 LINE L2 -317 2996 2852 2572 62 0 0 chr20 37698447 37698752 -34455130 + AluY SINE Alu 1 305 -6 326 256 90 77 chr20 37698752 37698820 -34455062 - L2 LINE L2 -461 2852 2786 189 0 0 0 chr20 37698820 37698841 -34455041 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 326 256 90 77 chr20 37698841 37698903 -34454979 - L2 LINE L2 -527 2786 2661 2216 88 0 69 chr20 37699356 37699674 -34454208 - AluSx SINE Alu -16 296 1 1778 178 7 3 chr20 37699681 37699973 -34453909 - AluJo SINE Alu -19 293 1 2222 130 0 0 chr20 37699984 37700284 -34453598 - AluSx SINE Alu -12 300 1 2342 117 3 0 chr20 37700546 37700854 -34453028 + AluSx SINE Alu 1 309 -3 1605 150 49 0 chr20 37701281 37701527 -34452355 - AluSx SINE Alu -24 288 31 1509 164 4 16 chr20 37701527 37701776 -34452106 + AluJo SINE Alu 51 297 -15 2290 118 0 6 chr20 37701779 37702094 -34451788 + AluSq SINE Alu 1 313 0 182 349 0 16 chr20 37702103 37702166 -34451716 + L2 LINE L2 3121 3182 -90 1592 141 18 14 chr20 37702249 37702526 -34451356 + L1MB2 LINE L1 5894 6171 0 2381 108 0 0 chr20 37702671 37702978 -34450904 + AluSq SINE Alu 1 307 -6 23 33 0 0 chr20 37703149 37703179 -34450703 + AT_rich Low_complexity Low_complexity 1 30 0 1725 203 7 45 chr20 37703511 37703692 -34450190 + MSTD LTR MaLR 1 187 -209 2125 89 7 18 chr20 37703692 37704002 -34449880 - AluSg SINE Alu 0 307 1 1725 203 7 45 chr20 37704002 37704239 -34449643 + MSTD LTR MaLR 187 396 0 185 246 53 35 chr20 37704248 37704305 -34449577 + L2 LINE L2 2991 3048 -224 1179 178 66 0 chr20 37704413 37704626 -34449256 - AluJo SINE Alu 0 312 86 2194 124 0 0 chr20 37704628 37704927 -34448955 - AluSx SINE Alu -13 299 1 2428 101 0 0 chr20 37704936 37705242 -34448640 - AluY SINE Alu -5 306 1 691 268 19 19 chr20 37705332 37705537 -34448345 - MIR SINE MIR -30 232 28 188 281 18 18 chr20 37705549 37705606 -34448276 - MIR3 SINE MIR -17 191 135 2159 135 3 6 chr20 37705691 37706002 -34447880 - AluSx SINE Alu -2 310 1 1876 162 0 17 chr20 37706004 37706301 -34447581 - AluJb SINE Alu -16 296 5 442 196 62 10 chr20 37706419 37706516 -34447366 + MIR SINE MIR 128 229 -33 614 280 149 90 chr20 37706568 37706632 -34447250 - L3 LINE CR1 -255 1322 1263 2268 90 28 0 chr20 37706632 37706922 -34446960 - AluSg SINE Alu -12 298 1 614 280 149 90 chr20 37706922 37707414 -34446468 - L3 LINE CR1 -314 1263 733 210 253 160 0 chr20 37707434 37707509 -34446373 + MIR SINE MIR 166 252 -10 262 197 106 45 chr20 37707530 37707596 -34446286 + L2 LINE L2 3244 3313 0 612 237 0 53 chr20 37707664 37707816 -34446066 - MIR SINE MIR -111 151 8 2155 132 0 13 chr20 37708194 37708504 -34445378 + AluSx SINE Alu 1 306 -6 1432 163 93 57 chr20 37708511 37708812 -34445070 + AluJo SINE Alu 1 312 0 257 240 0 0 chr20 37708838 37708888 -34444994 + MIR SINE MIR 101 150 -58 464 277 103 71 chr20 37708934 37709158 -34444724 - MIR SINE MIR -1 261 31 2151 141 0 3 chr20 37712849 37713162 -34440720 + AluJb SINE Alu 1 312 0 238 298 0 0 chr20 37713186 37713243 -34440639 - MIR SINE MIR -67 141 85 428 167 0 98 chr20 37713293 37713395 -34440487 - MIR SINE MIR -85 123 32 358 361 0 0 chr20 37713589 37713747 -34440135 + (TG)n Simple_repeat Simple_repeat 1 158 0 391 257 43 14 chr20 37714088 37714228 -34439654 - MIR3 SINE MIR -6 202 59 447 269 23 23 chr20 37714308 37714438 -34439444 - MIR3 SINE MIR -5 203 74 350 263 125 31 chr20 37714643 37714803 -34439079 + MIR3 SINE MIR 16 190 -18 192 77 0 0 chr20 37715708 37715734 -34438148 + (CAG)n Simple_repeat Simple_repeat 2 27 0 309 26 0 0 chr20 37716039 37716077 -34437805 + (CA)n Simple_repeat Simple_repeat 1 38 0 582 99 0 0 chr20 37716502 37716593 -34437289 + (TG)n Simple_repeat Simple_repeat 2 92 0 2321 69 35 0 chr20 37716916 37717205 -34436677 - AluY SINE Alu -11 300 2 329 359 14 21 chr20 37717368 37717510 -34436372 + L2 LINE L2 2944 3084 -188 2220 119 0 0 chr20 37717585 37717878 -34436004 - AluSx SINE Alu -1 311 19 252 61 0 0 chr20 37717878 37717911 -34435971 + AluYa5 SINE Alu 112 144 -157 538 178 0 0 chr20 37717911 37718012 -34435870 + AluSg/x SINE Alu 206 306 -3 26 0 0 0 chr20 37718012 37718038 -34435844 + AT_rich Low_complexity Low_complexity 1 26 0 360 298 128 21 chr20 37718440 37718581 -34435301 + L2 LINE L2 3117 3272 0 253 397 0 13 chr20 37718617 37718695 -34435187 + L2 LINE L2 3106 3182 -90 567 268 95 12 chr20 37718778 37718946 -34434936 + MIR SINE MIR 15 196 -66 1021 95 0 15 chr20 37718951 37719088 -34434794 + AluY SINE Alu 1 135 -176 2365 97 0 3 chr20 37719134 37719432 -34434450 - AluSc SINE Alu -12 297 1 1776 156 87 0 chr20 37719544 37719820 -34434062 - AluJb SINE Alu -12 300 1 1881 100 4 0 chr20 37719829 37720070 -34433812 - AluSx SINE Alu -15 297 56 282 157 0 0 chr20 37720142 37720193 -34433689 - AluSx SINE Alu -252 51 1 2166 104 7 29 chr20 37720217 37720525 -34433357 - AluSx SINE Alu -11 301 1 180 291 0 0 chr20 37720525 37720580 -34433302 - MIR SINE MIR -56 152 98 2276 95 3 0 chr20 37721181 37721490 -34432392 - AluSx SINE Alu 0 310 1 273 296 139 13 chr20 37721655 37721755 -34432127 + MIR SINE MIR 4 115 -93 1263 240 108 42 chr20 37721767 37722254 -34431628 - L2 LINE L2 -8 3305 2783 2302 108 0 3 chr20 37722263 37722568 -34431314 - AluSg SINE Alu -2 308 5 1093 90 0 35 chr20 37722568 37722713 -34431169 - AluSq/x SINE Alu -173 140 1 235 227 0 45 chr20 37722713 37722779 -34431103 - L2 LINE L2 -536 2778 2716 * 535 266 15 9 chr20 37722764 37722913 -34430969 + MIR SINE MIR 15 164 -63 1122 143 4 127 chr20 37722940 37723062 -34430820 + AluJo SINE Alu 13 148 -164 2278 112 0 3 chr20 37723062 37723365 -34430517 + AluSg SINE Alu 1 302 -8 2435 87 6 3 chr20 37723367 37723679 -34430203 + AluSp SINE Alu 1 313 0 1122 143 4 127 chr20 37723679 37723790 -34430092 + AluJo SINE Alu 149 220 -92 192 283 104 28 chr20 37723689 37723705 -34430177 + MIR SINE MIR 136 149 -113 * 2183 105 0 7 chr20 37723705 37724011 -34429871 + AluSq SINE Alu 1 304 -9 192 283 104 28 chr20 37724011 37724100 -34429782 + MIR SINE MIR 149 249 -13 1125 150 0 0 chr20 37724105 37724285 -34429597 - FRAM SINE Alu 0 176 1 180 0 0 0 chr20 37724296 37724316 -34429566 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 458 304 30 7 chr20 37724333 37724468 -34429414 - MIR SINE MIR -105 157 20 513 59 0 0 chr20 37724661 37724729 -34429153 - L1PA5 LINE L1 -1 6153 6086 1848 47 0 17 chr20 37724729 37724961 -34428921 - L1PA5 LINE L1 0 6154 5927 302 54 0 0 chr20 37724962 37724999 -34428883 + L1PA5 LINE L1 5912 5948 -207 28 48 0 0 chr20 37725270 37725312 -34428570 + AT_rich Low_complexity Low_complexity 1 42 0 869 150 0 0 chr20 37725512 37725645 -34428237 + FLAM_C SINE Alu 1 133 0 314 205 0 51 chr20 37725690 37725768 -34428114 - L1ME4a LINE L1 -7 6114 6041 337 273 30 0 chr20 37725923 37726022 -34427860 - MIR SINE MIR -84 178 77 34 24 0 0 chr20 37726069 37726110 -34427772 + AT_rich Low_complexity Low_complexity 1 41 0 1953 129 27 0 chr20 37726128 37726423 -34427459 - AluSx SINE Alu -9 303 1 748 194 0 0 chr20 37726823 37726947 -34426935 - FLAM_A SINE Alu -9 124 1 1136 131 0 6 chr20 37726961 37727136 -34426746 - AluJb SINE Alu -18 294 121 295 289 84 68 chr20 37727188 37727378 -34426504 + L2 LINE L2 3121 3313 0 1654 180 0 16 chr20 37727387 37727698 -34426184 + AluJo SINE Alu 7 312 0 1984 113 10 10 chr20 37727700 37728000 -34425882 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr20 37728722 37728744 -34425138 + (A)n Simple_repeat Simple_repeat 1 22 0 309 89 0 0 chr20 37728744 37728789 -34425093 + (TA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr20 37728823 37728846 -34425036 + AT_rich Low_complexity Low_complexity 1 23 0 827 125 0 8 chr20 37729252 37729380 -34424502 - AluJb SINE Alu -3 309 183 880 142 0 0 chr20 37729380 37729514 -34424368 - FLAM_C SINE Alu -9 134 1 1671 156 34 7 chr20 37729572 37729841 -34424041 + MER1B DNA MER1_type 1 276 -63 185 326 0 0 chr20 37729971 37730017 -34423865 + L2 LINE L2 3268 3313 0 2229 86 3 0 chr20 37730111 37730402 -34423480 - AluSp SINE Alu -21 292 1 862 309 148 14 chr20 37730485 37730648 -34423234 - L2 LINE L2 0 3313 3173 2243 78 0 3 chr20 37730648 37730944 -34422938 + AluY SINE Alu 1 295 -16 862 309 148 14 chr20 37730944 37731139 -34422743 - L2 LINE L2 -140 3173 2907 381 263 114 18 chr20 37731503 37731617 -34422265 - L2 LINE L2 0 3272 3148 398 275 138 6 chr20 37731617 37731784 -34422098 + MER5A DNA MER1_type 1 189 0 2429 47 0 7 chr20 37731852 37732150 -34421732 + AluSc SINE Alu 1 296 -13 2377 57 3 0 chr20 37733577 37733875 -34420007 - AluSp SINE Alu -14 299 1 535 226 22 44 chr20 37733880 37734017 -34419865 - MIR SINE MIR -70 192 59 216 291 76 13 chr20 37734367 37734446 -34419436 + MIR SINE MIR 1 84 -178 1931 125 14 3 chr20 37734467 37734762 -34419120 - AluSx SINE Alu -14 298 1 273 353 23 58 chr20 37734864 37735037 -34418845 - L2 LINE L2 -22 3291 3125 1293 145 55 4 chr20 37735053 37735288 -34418594 - AluJo SINE Alu -10 302 56 1270 146 0 10 chr20 37735288 37735494 -34418388 + AluSg/x SINE Alu 92 295 -15 459 228 101 7 chr20 37735495 37735644 -34418238 - L2 LINE L2 -1118 2196 2034 189 358 125 0 chr20 37736018 37736138 -34417744 + L2 LINE L2 3138 3272 0 500 145 222 0 chr20 37736523 37736640 -34417242 - L1MC3 LINE L1 0 7785 7643 811 104 0 123 chr20 37736648 37736811 -34417071 - FLAM_C SINE Alu 0 143 1 390 250 115 0 chr20 37736863 37736959 -34416923 + MIR3 SINE MIR 98 204 -4 25 51 0 0 chr20 37736965 37737004 -34416878 + AT_rich Low_complexity Low_complexity 1 39 0 353 78 0 223 chr20 37737127 37737180 -34416702 - MER116 DNA Mariner 0 80 59 1211 206 35 14 chr20 37737180 37737462 -34416420 + AluJo SINE Alu 1 288 -24 353 78 0 223 chr20 37737462 37737511 -34416371 - MER116 DNA Mariner -21 59 1 348 213 0 0 chr20 37738132 37738193 -34415689 - Charlie8 DNA MER1_type -2155 262 202 260 243 81 14 chr20 37738168 37738242 -34415640 - Charlie8 DNA MER1_type -2129 288 210 * 765 237 29 24 chr20 37738235 37738442 -34415440 - Charlie8 DNA MER1_type -2168 249 42 273 315 11 0 chr20 37739010 37739102 -34414780 - MIR SINE MIR -96 112 20 540 242 25 125 chr20 37739277 37739517 -34414365 + MIR SINE MIR 37 252 -10 251 194 290 0 chr20 37739672 37739734 -34414148 - L2 LINE L2 -4 3268 3189 289 283 26 35 chr20 37739796 37739909 -34413973 - MER103 DNA DNA -1 165 54 191 125 181 56 chr20 37740372 37740444 -34413438 - MIR SINE MIR -46 216 136 959 181 0 0 chr20 37740450 37740610 -34413272 - AluJb SINE Alu -20 292 133 225 0 0 0 chr20 37740725 37740750 -34413132 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2164 112 0 0 chr20 37740801 37741097 -34412785 + AluSx SINE Alu 1 296 -16 385 158 79 40 chr20 37741821 37741896 -34411986 + Tigger5 DNA MER2_type 1 78 -2245 251 217 0 0 chr20 37741896 37741942 -34411940 - Tigger5 DNA MER2_type -3 2320 2275 1435 167 53 28 chr20 37741952 37742278 -34411604 - AluJo SINE Alu 0 333 1 2187 99 7 3 chr20 37742321 37742623 -34411259 + AluSg SINE Alu 1 303 -7 360 213 80 0 chr20 37742636 37742711 -34411171 + Tigger5 DNA MER2_type 2242 2322 -1 290 256 15 131 chr20 37742724 37742818 -34411064 - MIR SINE MIR -75 187 112 2196 122 0 0 chr20 37742818 37743129 -34410753 + AluSx SINE Alu 1 311 -1 290 256 15 131 chr20 37743129 37743171 -34410711 - MIR SINE MIR -150 112 67 406 271 32 78 chr20 37745479 37745625 -34408257 + L2 LINE L2 2871 3005 -267 2087 108 3 14 chr20 37745625 37745922 -34407960 - AluSx SINE Alu -10 302 9 406 271 32 78 chr20 37745922 37745993 -34407889 + L2 LINE L2 3005 3078 -194 193 282 0 99 chr20 37746306 37746356 -34407526 + L2 LINE L2 3244 3287 -26 1762 159 7 7 chr20 37746356 37746657 -34407225 - AluJo SINE Alu -11 301 1 193 282 0 99 chr20 37746657 37746677 -34407205 + L2 LINE L2 3287 3307 -6 1294 114 89 51 chr20 37746763 37746999 -34406883 + AluJo SINE Alu 55 299 -13 201 74 0 0 chr20 37747476 37747503 -34406379 + (TTGGGG)n Simple_repeat Simple_repeat 6 32 0 198 235 147 0 chr20 37747829 37747897 -34405985 - L2 LINE L2 0 3313 3236 677 272 131 87 chr20 37747931 37748149 -34405733 + L3 LINE CR1 1088 1295 -282 2146 97 0 10 chr20 37748149 37748448 -34405434 + AluSp SINE Alu 1 296 -17 677 272 131 87 chr20 37748448 37748641 -34405241 + L3 LINE CR1 1295 1517 -60 748 268 95 13 chr20 37748945 37749176 -34404706 - Charlie8 DNA MER1_type -2137 280 31 469 284 197 10 chr20 37749337 37749545 -34404337 - MIR SINE MIR 0 262 16 244 239 159 11 chr20 37751913 37752001 -34401881 - L2 LINE L2 -15 3298 3198 295 287 72 21 chr20 37752376 37752552 -34401330 + MIR SINE MIR 20 250 -12 407 204 83 30 chr20 37752716 37752832 -34401050 + FRAM SINE Alu 1 99 -67 667 252 71 24 chr20 37752847 37753101 -34400781 - L1MC4a LINE L1 -1736 6072 5807 243 357 45 15 chr20 37753652 37753851 -34400031 + L2 LINE L2 2866 3070 -202 1878 130 3 43 chr20 37754542 37754697 -34399185 - AluSx SINE Alu -23 289 150 2110 116 3 0 chr20 37754697 37754991 -34398891 - AluSq SINE Alu -18 295 1 1878 130 3 43 chr20 37754991 37755136 -34398746 - AluSx SINE Alu -162 150 1 210 304 96 40 chr20 37755278 37755403 -34398479 + L2 LINE L2 3163 3294 -19 246 216 159 11 chr20 37755819 37755907 -34397975 - HAL1b LINE L1 -11 1337 1237 2201 89 10 0 chr20 37755966 37756259 -34397623 + AluSg SINE Alu 1 296 -14 494 298 60 13 chr20 37756368 37756519 -34397363 + L2 LINE L2 3115 3272 0 360 263 0 0 chr20 37757955 37758035 -34395847 + MIR SINE MIR 183 262 0 542 299 103 93 chr20 37758166 37758261 -34395621 - L1MEc LINE L1 -4102 2208 2115 2031 108 23 10 chr20 37758261 37758567 -34395315 - AluSg SINE Alu 0 310 1 542 299 103 93 chr20 37758567 37758817 -34395065 - L1MEc LINE L1 -4195 2115 1869 1763 145 17 14 chr20 37758817 37759113 -34394769 + AluJb SINE Alu 1 297 -15 542 299 103 93 chr20 37759113 37759375 -34394507 - L1MEc LINE L1 -4441 1869 1611 1902 153 10 3 chr20 37759375 37759682 -34394200 - AluJb SINE Alu -3 309 1 542 299 103 93 chr20 37759682 37759730 -34394152 - L1MEc LINE L1 -4699 1611 1565 522 0 0 0 chr20 37759730 37759788 -34394094 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 542 299 103 93 chr20 37759788 37759848 -34394034 - L1MEc LINE L1 -4745 1565 1483 2239 71 3 29 chr20 37759909 37760220 -34393662 - AluY SINE Alu -8 303 1 2022 121 6 16 chr20 37760226 37760540 -34393342 - AluSx SINE Alu 0 312 2 277 284 11 21 chr20 37760578 37760673 -34393209 - L1MEc LINE L1 -4871 1248 1155 22 56 0 0 chr20 37760684 37760720 -34393162 + AT_rich Low_complexity Low_complexity 1 36 0 2236 98 3 0 chr20 37760720 37761017 -34392865 + AluSp SINE Alu 1 298 -15 1547 141 15 78 chr20 37761019 37761352 -34392530 - AluJo SINE Alu 0 312 1 860 225 49 63 chr20 37761352 37761841 -34392041 - L1MEc LINE L1 -4957 1162 681 228 135 0 0 chr20 37761848 37761885 -34391997 + (T)n Simple_repeat Simple_repeat 1 37 0 588 279 125 14 chr20 37761913 37762121 -34391761 - L1MEc LINE L1 -5448 671 441 816 181 0 0 chr20 37762296 37762429 -34391453 - FLAM_A SINE Alu 0 133 1 1226 204 110 33 chr20 37762429 37762641 -34391241 - MER58B DNA MER1_type -2096 324 130 729 116 116 16 chr20 37762641 37762762 -34391120 + FLAM_C SINE Alu 1 133 0 2230 94 3 10 chr20 37762772 37763080 -34390802 + AluSx SINE Alu 1 306 -6 1226 204 110 33 chr20 37763080 37763155 -34390727 - MER58B DNA MER1_type -2298 122 3 913 163 0 7 chr20 37763163 37763316 -34390566 - FRAM SINE Alu -3 173 22 1983 123 13 25 chr20 37763329 37763645 -34390237 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 37763652 37763676 -34390206 + AT_rich Low_complexity Low_complexity 1 24 0 1321 126 88 0 chr20 37763717 37763932 -34389950 - AluSg/x SINE Alu -13 299 66 1474 171 7 48 chr20 37763932 37764225 -34389657 - AluJo SINE Alu -31 281 1 442 261 43 19 chr20 37764232 37764393 -34389489 - L1MEc LINE L1 -5951 168 4 240 182 23 0 chr20 37764490 37764534 -34389348 + L2 LINE L2 3264 3308 -5 2240 98 0 7 chr20 37764868 37765174 -34388708 + AluSx SINE Alu 1 304 -8 187 356 17 0 chr20 37765233 37765292 -34388590 - MIR SINE MIR 0 262 203 894 115 0 8 chr20 37765335 37765465 -34388417 + FLAM_C SINE Alu 1 129 -4 219 267 267 8 chr20 37765548 37765668 -34388214 - L3 LINE CR1 -74 1503 1353 378 306 219 23 chr20 37765706 37765971 -34387911 - L3 LINE CR1 -417 1160 844 241 135 0 0 chr20 37765976 37766013 -34387869 - tRNA-Cys-TGC tRNA tRNA -38 37 1 1864 146 0 31 chr20 37766124 37766446 -34387436 - AluJb SINE Alu 0 312 1 507 245 106 48 chr20 37766464 37766586 -34387296 - L2 LINE L2 -256 3057 2917 2174 100 0 7 chr20 37766586 37766885 -34386997 + AluSx SINE Alu 1 297 -15 507 245 106 48 chr20 37766885 37766970 -34386912 - L2 LINE L2 -396 2917 2838 763 231 93 13 chr20 37767091 37767316 -34386566 - MIR SINE MIR -16 246 4 791 173 0 0 chr20 37767580 37767707 -34386175 + FLAM_A SINE Alu 1 127 -6 2089 125 0 0 chr20 37767713 37768018 -34385864 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr20 37768088 37768114 -34385768 + AT_rich Low_complexity Low_complexity 1 26 0 324 254 142 40 chr20 37768118 37768287 -34385595 - MIR SINE MIR -62 146 8 279 287 11 46 chr20 37769071 37769158 -34384724 - L2 LINE L2 0 3313 3230 903 119 8 0 chr20 37769169 37769303 -34384579 + AluSq/x SINE Alu 1 135 -177 2015 114 23 0 chr20 37769303 37769602 -34384280 + AluSx SINE Alu 1 306 -6 1031 287 91 24 chr20 37769610 37769862 -34384020 - L2 LINE L2 -69 3244 3011 1544 175 61 9 chr20 37769862 37770188 -34383694 + L1MB8 LINE L1 5836 6178 0 1031 287 91 24 chr20 37770188 37770409 -34383473 - L2 LINE L2 -302 3011 2739 1939 129 3 0 chr20 37770422 37770708 -34383174 - AluSx SINE Alu -23 289 3 239 196 0 0 chr20 37770753 37770809 -34383073 + LTR66 LTR ERVL 401 456 -154 192 255 20 0 chr20 37770855 37770906 -34382976 - L2 LINE L2 -664 2650 2599 1643 165 30 24 chr20 37771659 37771956 -34381926 - AluJo SINE Alu -13 299 1 867 263 84 139 chr20 37772505 37773160 -34380722 - L2 LINE L2 -1 3312 2623 1914 114 47 13 chr20 37773160 37773459 -34380423 + AluSx SINE Alu 1 309 -3 715 129 9 0 chr20 37773345 37773461 -34380421 + AluSg/x SINE Alu 192 308 -1 * 867 263 84 139 chr20 37773459 37773839 -34380043 - L2 LINE L2 -690 2623 2316 1252 129 0 0 chr20 37773871 37774042 -34379840 + AluSg/x SINE Alu 135 305 -7 230 294 47 24 chr20 37774044 37774129 -34379753 + MIR SINE MIR 176 262 0 784 293 32 4 chr20 37775836 37776085 -34377797 + MIR SINE MIR 1 256 -6 237 331 108 0 chr20 37776502 37776632 -34377250 + MIR SINE MIR 49 192 -70 2285 127 0 0 chr20 37776675 37776975 -34376907 + AluSq SINE Alu 1 300 -13 208 362 78 0 chr20 37777161 37777277 -34376605 - L2 LINE L2 -10 3303 3179 862 177 171 11 chr20 37777944 37778125 -34375757 - AluSx SINE Alu -11 298 89 204 304 18 0 chr20 37778163 37778219 -34375663 - MIR3 SINE MIR -9 199 143 609 96 0 0 chr20 37778310 37778393 -34375489 - AluSx SINE Alu -230 83 1 1414 115 0 5 chr20 37778847 37779039 -34374843 + AluSg/x SINE Alu 110 300 -10 182 339 18 0 chr20 37779178 37779234 -34374648 - MIR3 SINE MIR -9 199 143 213 39 0 0 chr20 37779497 37779523 -34374359 + (TCTCC)n Simple_repeat Simple_repeat 2 27 0 456 255 75 116 chr20 37782830 37783053 -34370829 - L2 LINE L2 -43 3229 3019 2438 96 0 0 chr20 37783053 37783355 -34370527 + AluSx SINE Alu 1 302 -10 456 255 75 116 chr20 37783355 37783425 -34370457 - L2 LINE L2 -253 3019 2948 307 296 200 22 chr20 37783478 37783833 -34370049 - L2 LINE L2 -453 2861 2444 227 298 60 0 chr20 37784075 37784159 -34369723 + L2 LINE L2 3164 3252 -20 272 309 43 0 chr20 37784383 37784477 -34369405 + MIR SINE MIR 50 147 -115 250 275 0 109 chr20 37784985 37785123 -34368759 - MIR SINE MIR -120 142 20 258 330 68 10 chr20 37785185 37785288 -34368594 + MIR3 SINE MIR 51 159 -49 481 157 116 107 chr20 37785936 37785997 -34367885 + MER58A DNA MER1_type 4 63 -278 2219 124 0 3 chr20 37785997 37786296 -34367586 - AluSg SINE Alu -12 298 1 481 157 116 107 chr20 37786296 37786355 -34367527 + MER58A DNA MER1_type 63 125 -99 263 324 86 0 chr20 37787312 37787417 -34366465 + L2 LINE L2 3154 3267 -5 2028 152 0 3 chr20 37788399 37788689 -34365193 + AluSx SINE Alu 4 292 -20 260 204 54 43 chr20 37788693 37788786 -34365096 + L1ME2 LINE L1 6062 6155 -9 209 262 33 0 chr20 37788800 37788861 -34365021 - MER5B DNA MER1_type -115 63 1 287 344 62 0 chr20 37789757 37789885 -34363997 - L2 LINE L2 -28 3244 3109 895 204 0 0 chr20 37790387 37790539 -34363343 - FRAM SINE Alu -21 155 4 2384 99 3 13 chr20 37790927 37791241 -34362641 - AluSp SINE Alu -2 311 1 1225 138 0 6 chr20 37795286 37795460 -34358422 + AluJb SINE Alu 134 306 -6 1647 145 93 24 chr20 37795470 37795760 -34358122 + AluJb SINE Alu 2 311 -1 365 228 41 87 chr20 37796132 37796351 -34357531 - L1MC5 LINE L1 -865 7096 6888 229 243 71 138 chr20 37796383 37796432 -34357450 - L1MC4a LINE L1 -1072 6736 6685 2317 99 3 10 chr20 37796432 37796746 -34357136 + AluSx SINE Alu 1 312 0 229 243 71 138 chr20 37796746 37796845 -34357037 - L1MC4a LINE L1 -1123 6685 6581 411 132 57 38 chr20 37796845 37796951 -34356931 + L1MB3 LINE L1 6073 6180 -3 229 243 71 138 chr20 37796951 37796985 -34356897 - L1MC4a LINE L1 -1227 6581 6570 2375 83 13 0 chr20 37796985 37797287 -34356595 + AluSg SINE Alu 1 306 -4 229 243 71 138 chr20 37797287 37797341 -34356541 - L1MC4a LINE L1 -1238 6570 6514 2247 139 0 0 chr20 37797345 37797654 -34356228 - AluSx SINE Alu -3 309 1 1221 207 0 5 chr20 37797699 37797921 -34355961 + AluJb SINE Alu 78 298 -14 2298 100 3 0 chr20 37797965 37798255 -34355627 - AluSg SINE Alu -19 291 1 409 285 111 64 chr20 37798269 37798504 -34355378 - L1MC4a LINE L1 -1455 6353 6108 293 204 183 78 chr20 37799096 37799291 -34354591 - L2 LINE L2 -339 2975 2751 2463 81 3 0 chr20 37799291 37799589 -34354293 - AluSp SINE Alu -14 299 1 293 204 183 78 chr20 37799589 37799623 -34354259 - L2 LINE L2 -563 2751 2722 515 132 0 0 chr20 37801517 37801593 -34352289 + AluJ/FLAM SINE Alu 9 84 -228 1697 145 71 17 chr20 37801704 37802000 -34351882 - AluSx SINE Alu 0 312 1 545 206 84 13 chr20 37802000 37802155 -34351727 - Charlie5 DNA MER1_type -206 2406 2241 375 118 79 0 chr20 37802154 37802230 -34351652 - Charlie5 DNA MER1_type -2488 124 43 * 2486 90 0 0 chr20 37802378 37802677 -34351205 - AluSq SINE Alu -14 299 1 811 219 25 71 chr20 37802767 37802942 -34350940 + MLT1C LTR MaLR 8 167 -300 2262 106 3 3 chr20 37802942 37803234 -34350648 + AluSq SINE Alu 1 292 -21 811 219 25 71 chr20 37803234 37803312 -34350570 + MLT1C LTR MaLR 167 248 -219 1447 124 70 12 chr20 37803312 37803569 -34350313 - MER66B LTR ERV1 0 486 215 242 235 118 0 chr20 37803568 37803636 -34350246 - AluJ/FLAM SINE Alu -226 76 1 * 260 288 78 58 chr20 37803665 37803870 -34350012 - LTR67 LTR ERVL 0 557 349 483 263 7 2 chr20 37803879 37804015 -34349867 + MLT1H LTR MaLR 1 174 -375 1953 173 0 10 chr20 37804016 37804322 -34349560 + AluJo SINE Alu 2 304 -8 288 337 54 65 chr20 37804324 37804585 -34349297 + L1MEd LINE L1 307 564 -5555 1811 110 12 110 chr20 37805297 37805623 -34348259 - AluJb SINE Alu -18 294 1 297 243 189 36 chr20 37807446 37807557 -34346325 + L2 LINE L2 3185 3312 -1 2367 104 0 3 chr20 37807575 37807874 -34346008 - AluSx SINE Alu -14 298 1 2246 100 0 17 chr20 37807880 37808223 -34345659 - AluSq SINE Alu 0 313 1 526 310 91 33 chr20 37808234 37808423 -34345459 + L2 LINE L2 2204 2381 -933 2278 113 0 13 chr20 37808423 37808733 -34345149 - AluSx SINE Alu -6 306 1 526 310 91 33 chr20 37808733 37808833 -34345049 + L2 LINE L2 2381 2474 -840 1565 187 30 17 chr20 37808833 37809001 -34344881 - AluSx SINE Alu -8 304 129 2109 138 0 7 chr20 37809001 37809305 -34344577 - AluSx SINE Alu -5 307 6 1565 187 30 17 chr20 37809305 37809436 -34344446 - AluSx SINE Alu -183 129 1 526 310 91 33 chr20 37809436 37809509 -34344373 + L2 LINE L2 2474 2588 -726 465 195 17 169 chr20 37809706 37809782 -34344100 + L1MD3 LINE L1 7800 7886 -109 2287 92 10 16 chr20 37809782 37810086 -34343796 + AluSp SINE Alu 1 302 -11 465 195 17 169 chr20 37810086 37810134 -34343748 + L1MD3 LINE L1 7886 7940 -55 1713 154 68 10 chr20 37810134 37810246 -34343636 + AluJo SINE Alu 1 105 -207 423 0 0 0 chr20 37810246 37810293 -34343589 + (CA)n Simple_repeat Simple_repeat 2 48 0 1713 154 68 10 chr20 37810293 37810473 -34343409 + AluJo SINE Alu 105 310 -2 465 195 17 169 chr20 37810473 37810578 -34343304 + L1MD3 LINE L1 7940 7995 0 1122 154 97 15 chr20 37810584 37810779 -34343103 + AluJo SINE Alu 84 294 -18 2263 115 0 0 chr20 37810840 37811135 -34342747 - AluSc SINE Alu -14 295 1 2327 117 3 0 chr20 37811205 37811505 -34342377 + AluSx SINE Alu 1 301 -11 315 0 0 0 chr20 37811505 37811519 -34342363 + (TG)n Simple_repeat Simple_repeat 1 49 0 315 0 0 0 chr20 37811519 37811554 -34342328 + (TG)n Simple_repeat Simple_repeat 2 36 0 1272 95 36 32 chr20 37811589 37811616 -34342266 - L1PA10 LINE L1 -8 6160 6135 2217 100 20 17 chr20 37811616 37811917 -34341965 + AluSc SINE Alu 1 302 -7 1272 95 36 32 chr20 37811917 37812110 -34341772 - L1PA10 LINE L1 -33 6135 5939 298 143 0 0 chr20 37812130 37812179 -34341703 - L1MB7 LINE L1 -98 6086 6038 823 218 25 96 chr20 37812316 37812601 -34341281 - L1MEd LINE L1 -4879 1235 1005 2254 108 10 3 chr20 37812601 37812897 -34340985 - AluSx SINE Alu -14 298 1 823 218 25 96 chr20 37812897 37812989 -34340893 - L1MEd LINE L1 -5109 1005 908 1179 74 20 0 chr20 37813006 37813154 -34340728 - AluSg/x SINE Alu -13 299 149 255 134 152 0 chr20 37813158 37813224 -34340658 + MIR SINE MIR 88 145 -63 2181 125 0 0 chr20 37813234 37813523 -34340359 + AluSx SINE Alu 9 297 -15 829 138 0 43 chr20 37813910 37814048 -34339834 - FLAM_A SINE Alu -1 132 1 2017 126 14 3 chr20 37814108 37814401 -34339481 + AluSq SINE Alu 1 296 -17 2174 119 0 3 chr20 37814452 37814745 -34339137 - AluSg SINE Alu -18 292 1 211 70 23 23 chr20 37814765 37814808 -34339074 + (TTA)n Simple_repeat Simple_repeat 1 43 0 2322 81 0 56 chr20 37814843 37815166 -34338716 - AluSg SINE Alu -5 305 1 209 350 70 0 chr20 37815167 37815267 -34338615 + L2 LINE L2 3152 3258 -14 2170 116 0 26 chr20 37815319 37815661 -34338221 - AluSq SINE Alu 0 313 1 2020 124 0 39 chr20 37815661 37815968 -34337914 - AluSx SINE Alu -15 297 3 619 227 149 7 chr20 37816062 37816216 -34337666 - MER5A DNA MER1_type -1 188 13 2694 41 0 22 chr20 37816503 37816821 -34337061 - AluY SINE Alu 0 311 1 336 219 55 94 chr20 37816866 37816994 -34336888 + L1MCa LINE L1 1959 2081 -4345 368 223 45 102 chr20 37817004 37817161 -34336721 + L1MCa LINE L1 1918 2065 -4361 324 219 12 119 chr20 37817061 37817221 -34336661 - L1MCa LINE L1 -4362 2064 1922 * 345 194 37 119 chr20 37817178 37817312 -34336570 + L1MCa LINE L1 1959 2081 -4345 26 0 0 0 chr20 37817312 37817338 -34336544 + AT_rich Low_complexity Low_complexity 1 26 0 395 136 0 0 chr20 37817355 37817414 -34336468 - AluJo SINE Alu -20 282 224 492 198 94 158 chr20 37817573 37817901 -34335981 + MER51A LTR ERV1 328 634 0 1217 149 79 23 chr20 37817922 37818005 -34335877 - AluJo SINE Alu -86 226 149 2097 127 0 3 chr20 37818005 37818296 -34335586 - AluSx SINE Alu -4 308 19 1217 149 79 23 chr20 37818296 37818426 -34335456 - AluJo SINE Alu -163 149 1 360 306 100 34 chr20 37818429 37818702 -34335180 - L1MC4a LINE L1 -346 5826 5636 407 265 34 8 chr20 37819129 37819246 -34334636 + MIR SINE MIR 30 149 -113 390 259 102 0 chr20 37819300 37819408 -34334474 - MER5A DNA MER1_type -70 119 1 301 271 24 0 chr20 37820701 37820786 -34333096 - MIR SINE MIR -71 137 51 297 277 277 13 chr20 37821011 37821170 -34332712 + MIR SINE MIR 19 219 -43 370 214 168 23 chr20 37821348 37821479 -34332403 - L2 LINE L2 -789 2525 2376 749 199 13 0 chr20 37821502 37821653 -34332229 - MLT1F LTR MaLR -2 540 388 506 16 16 0 chr20 37821679 37821742 -34332140 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 2215 92 0 7 chr20 37821742 37822024 -34331858 - AluSc SINE Alu -29 280 1 2250 101 20 0 chr20 37822476 37822772 -34331110 - AluSx SINE Alu -9 303 2 1548 176 62 62 chr20 37822773 37822946 -34330936 - MLT1F LTR MaLR -201 341 166 2290 100 0 29 chr20 37822946 37823257 -34330625 + AluSq SINE Alu 1 302 -11 1548 176 62 62 chr20 37823257 37823424 -34330458 - MLT1F LTR MaLR -375 167 1 1240 243 459 6 chr20 37823433 37824636 -34329246 - L2 LINE L2 -932 2382 635 403 294 61 25 chr20 37824726 37824889 -34328993 + MIR SINE MIR 91 259 -3 223 260 65 39 chr20 37824906 37824983 -34328899 + MIR SINE MIR 183 261 -1 248 306 238 26 chr20 37825412 37825605 -34328277 + MIR SINE MIR 13 246 -16 241 167 0 0 chr20 37825648 37825690 -34328192 - MER5A DNA MER1_type -85 104 63 715 162 49 0 chr20 37825696 37825838 -34328044 - L1MB4 LINE L1 0 6180 6032 921 137 0 34 chr20 37825867 37826013 -34327869 + FLAM_C SINE Alu 3 143 0 642 302 28 0 chr20 37826671 37826853 -34327029 + MIR SINE MIR 2 188 -74 347 239 146 31 chr20 37826952 37827082 -34326800 + MIR SINE MIR 48 192 -70 321 185 261 25 chr20 37827104 37827223 -34326659 - L2 LINE L2 0 3313 3167 235 264 19 0 chr20 37827227 37827280 -34326602 + Tigger5 DNA MER2_type 2 55 -2268 499 110 0 130 chr20 37827280 37827309 -34326573 + Tigger5 DNA MER2_type 2237 2268 -55 2413 104 0 0 chr20 37827309 37827608 -34326274 - AluSx SINE Alu -13 299 1 499 110 0 130 chr20 37827608 37827678 -34326204 + Tigger5 DNA MER2_type 2268 2323 0 5582 255 131 36 chr20 37827679 37828005 -34325877 - L2 LINE L2 -157 3156 2863 2422 103 0 0 chr20 37828005 37828307 -34325575 + AluSx SINE Alu 1 302 -10 5582 255 131 36 chr20 37828307 37828701 -34325181 - L2 LINE L2 -450 2863 2508 2042 121 0 7 chr20 37828701 37828983 -34324899 + AluSx SINE Alu 21 300 -12 5582 255 131 36 chr20 37828983 37830692 -34323190 - L2 LINE L2 -805 2508 398 1547 141 141 11 chr20 37830692 37830961 -34322921 - AluJb SINE Alu -2 310 7 5582 255 131 36 chr20 37830961 37831401 -34322481 - L2 LINE L2 -2915 398 2 314 206 0 0 chr20 37831743 37831806 -34322076 - MIR SINE MIR -68 140 78 278 320 170 8 chr20 37832900 37833230 -34320652 - L2 LINE L2 -242 3030 2646 1149 127 30 0 chr20 37833343 37833508 -34320374 + AluSg/x SINE Alu 135 304 -6 275 209 0 45 chr20 37837707 37837774 -34316108 + G-rich Low_complexity Low_complexity 2 65 0 1313 223 58 69 chr20 37838786 37839265 -34314617 + MLT1K LTR MaLR 3 476 -112 2087 145 0 0 chr20 37839823 37840126 -34313756 + AluJb SINE Alu 1 303 -9 1879 151 0 62 chr20 37840914 37841239 -34312643 + AluJb SINE Alu 4 308 -4 243 246 29 43 chr20 37841853 37841922 -34311960 - MIR SINE MIR -93 169 102 2269 99 7 0 chr20 37841923 37842216 -34311666 + AluSx SINE Alu 1 295 -17 401 88 0 44 chr20 37843195 37843263 -34310619 - AluJo SINE Alu -176 136 72 2423 97 3 0 chr20 37843263 37843574 -34310308 + AluSx SINE Alu 1 312 0 627 171 0 32 chr20 37843612 37843735 -34310147 - FLAM_C SINE Alu -19 124 6 280 273 60 38 chr20 37843746 37843998 -34309884 - L1MCa LINE L1 -810 1977 1732 682 175 0 16 chr20 37843998 37844124 -34309758 - FLAM_A SINE Alu -5 128 5 280 273 60 38 chr20 37844124 37844160 -34309722 - L1MCa LINE L1 -1055 1732 1446 2407 115 0 0 chr20 37844170 37844482 -34309400 - AluSx SINE Alu 0 312 1 253 286 29 29 chr20 37844483 37844588 -34309294 + L2 LINE L2 3130 3234 -79 1938 130 24 14 chr20 37844685 37844977 -34308905 + AluJb SINE Alu 1 295 -17 2310 206 82 0 chr20 37844983 37845660 -34308222 + L1M3 LINE L1 4737 5466 -714 2542 71 0 3 chr20 37845667 37845977 -34307905 - AluSg SINE Alu -1 309 1 2412 104 0 0 chr20 37846007 37846315 -34307567 + AluSx SINE Alu 1 308 -4 608 290 73 51 chr20 37846315 37846630 -34307252 + L2 LINE L2 2706 3024 -289 902 195 25 0 chr20 37846630 37846789 -34307093 - AluJb SINE Alu -30 282 120 487 80 340 20 chr20 37846806 37846906 -34306976 + FLAM_C SINE Alu 2 133 0 497 201 7 171 chr20 37846950 37847035 -34306847 + L2 LINE L2 3083 3180 -133 2006 113 7 52 chr20 37847035 37847345 -34306537 - AluSp SINE Alu -17 296 1 497 201 7 171 chr20 37847345 37847504 -34306378 + L2 LINE L2 3180 3282 -31 2443 60 40 3 chr20 37847504 37847802 -34306080 + AluSp SINE Alu 1 309 -4 497 201 7 171 chr20 37847802 37847825 -34306057 + L2 LINE L2 3282 3307 -6 281 354 56 0 chr20 37847825 37848023 -34305859 - L1M4 LINE L1 -2424 3722 3514 2046 132 7 3 chr20 37848067 37848356 -34305526 + AluSx SINE Alu 1 290 -22 558 149 45 82 chr20 37848378 37848477 -34305405 - AluJo SINE Alu -80 232 138 2242 119 6 6 chr20 37848477 37848788 -34305094 - AluSx SINE Alu -1 311 1 558 149 45 82 chr20 37848788 37848822 -34305060 - AluJo SINE Alu -174 138 104 2115 117 0 17 chr20 37848822 37849122 -34304760 + AluSg SINE Alu 1 295 -15 1201 202 116 23 chr20 37849123 37849724 -34304158 + L1M4b LINE L1 492 1171 -5375 303 360 34 0 chr20 37849724 37849813 -34304069 - L1MC4 LINE L1 -1336 6706 6615 2584 62 7 0 chr20 37849813 37850120 -34303762 - AluY SINE Alu -2 309 1 1291 210 11 102 chr20 37850126 37850251 -34303631 + L1M4b LINE L1 1169 1304 -5238 2233 97 10 10 chr20 37850251 37850549 -34303333 - AluY SINE Alu -13 298 1 1291 210 11 102 chr20 37850549 37850819 -34303063 + L1M4b LINE L1 1304 1597 -4945 1726 137 112 14 chr20 37850819 37851096 -34302786 + AluSq SINE Alu 1 304 -9 2354 100 3 0 chr20 37851100 37851400 -34302482 + AluSp SINE Alu 1 301 -12 1291 210 11 102 chr20 37851400 37851440 -34302442 + L1M4b LINE L1 1509 1551 -4991 2017 122 65 0 chr20 37851459 37851737 -34302145 - AluSq SINE Alu -17 296 1 2232 189 53 85 chr20 37851737 37852351 -34301531 - L1MC4a LINE L1 -881 6927 6332 1904 139 3 59 chr20 37852356 37852680 -34301202 - AluSx SINE Alu -6 306 1 1000 152 0 0 chr20 37852680 37852825 -34301057 - AluJo SINE Alu -167 145 1 952 209 37 61 chr20 37852848 37853145 -34300737 - L1MC4a LINE L1 -1488 6320 6031 2394 88 0 16 chr20 37853145 37853453 -34300429 - AluSc SINE Alu -6 303 1 364 311 51 23 chr20 37853612 37853789 -34300093 + MIR3 SINE MIR 23 204 -4 1147 137 93 90 chr20 37854649 37854737 -34299145 + MER33 DNA MER1_type 1 87 -2498 1066 202 128 57 chr20 37854737 37854862 -34299020 + AluJo SINE Alu 1 116 -186 1705 199 0 3 chr20 37854862 37855169 -34298713 - AluJb SINE Alu -4 308 3 1066 202 128 57 chr20 37855169 37855325 -34298557 + AluJo SINE Alu 116 302 0 1147 137 93 90 chr20 37855325 37855432 -34298450 + MER33 DNA MER1_type 87 192 -2393 2386 86 26 3 chr20 37855432 37855735 -34298147 - AluSx SINE Alu -2 310 1 1147 137 93 90 chr20 37855735 37855784 -34298098 + MER33 DNA MER1_type 192 239 -2346 2604 61 0 6 chr20 37855784 37856095 -34297787 - AluY SINE Alu -2 309 1 1147 137 93 90 chr20 37856095 37856169 -34297713 + MER33 DNA MER1_type 239 322 -2 1052 154 18 0 chr20 37856277 37856446 -34297436 - AluSg/x SINE Alu -7 305 134 253 308 55 14 chr20 37857218 37857317 -34296565 + MIR SINE MIR 45 149 -113 2248 116 7 0 chr20 37857317 37857619 -34296263 + AluSq SINE Alu 1 304 -9 253 308 55 14 chr20 37857619 37857686 -34296196 + MIR SINE MIR 149 212 -50 1730 157 25 11 chr20 37857710 37857991 -34295891 + AluJo SINE Alu 1 285 -27 2058 120 18 7 chr20 37858035 37858318 -34295564 + AluSx SINE Alu 1 286 -26 793 52 52 12 chr20 37858357 37858529 -34295353 + (TA)n Simple_repeat Simple_repeat 2 180 0 1483 240 73 20 chr20 37858596 37859396 -34294486 + L1MEc LINE L1 1887 2692 -3523 943 182 167 0 chr20 37859431 37859623 -34294259 + MER58A DNA MER1_type 1 224 0 2300 104 3 0 chr20 37862189 37862496 -34291386 - AluSx SINE Alu -4 308 1 1912 146 7 0 chr20 37863054 37863334 -34290548 - AluJb SINE Alu -30 282 1 1483 167 30 66 chr20 37863337 37863429 -34290453 - L1MB3 LINE L1 0 6183 6089 2573 65 3 0 chr20 37863429 37863737 -34290145 + AluY SINE Alu 2 310 -1 1483 167 30 66 chr20 37863737 37864010 -34289872 - L1MB3 LINE L1 -94 6089 5831 392 320 94 49 chr20 37864137 37864207 -34289675 + L2 LINE L2 2837 2902 -411 1669 159 0 33 chr20 37864207 37864483 -34289399 - AluJo SINE Alu -45 267 1 392 320 94 49 chr20 37864483 37864859 -34289023 + L2 LINE L2 2902 3303 -10 2187 136 3 3 chr20 37864880 37865188 -34288694 + AluSq SINE Alu 1 308 -5 862 180 12 0 chr20 37865189 37865361 -34288521 + L1ME2 LINE L1 5690 5863 -301 458 290 46 0 chr20 37865381 37865512 -34288370 - MER82 DNA MER2_type 0 653 517 786 188 0 0 chr20 37865515 37865648 -34288234 + FLAM_C SINE Alu 1 133 0 2282 108 0 0 chr20 37865658 37865944 -34287938 - AluSx SINE Alu -22 290 5 2492 90 0 0 chr20 37866294 37866604 -34287278 + AluSg SINE Alu 1 310 0 22 43 0 21 chr20 37866636 37866666 -34287216 + AT_rich Low_complexity Low_complexity 1 31 -15 1639 91 4 0 chr20 37866666 37866908 -34286974 + MER75B DNA T2_type 1 243 0 22 43 0 21 chr20 37866908 37866924 -34286958 + AT_rich Low_complexity Low_complexity 31 46 0 2050 130 16 23 chr20 37866924 37867232 -34286650 - AluSx SINE Alu 0 312 7 234 226 75 0 chr20 37867268 37867321 -34286561 - MER82 DNA MER2_type -161 492 436 2194 117 0 7 chr20 37867321 37867620 -34286262 - AluSx SINE Alu -7 305 9 835 196 17 17 chr20 37867626 37867805 -34286077 - MER82 DNA MER2_type -445 208 30 687 198 21 142 chr20 37867825 37868068 -34285814 + L1ME2 LINE L1 5901 6105 -59 2049 140 7 0 chr20 37868068 37868353 -34285529 + AluSx SINE Alu 1 287 -25 687 198 21 142 chr20 37868353 37868397 -34285485 + L1ME2 LINE L1 6105 6153 -11 2193 107 0 49 chr20 37868436 37868762 -34285120 + AluSg SINE Alu 1 310 0 2094 122 31 0 chr20 37868811 37869098 -34284784 + AluSx SINE Alu 1 296 -16 1205 168 25 5 chr20 37869158 37869361 -34284521 - AluJo SINE Alu -19 293 87 545 318 28 60 chr20 37869362 37869714 -34284168 + L1MCc LINE L1 102 442 -5981 2133 118 3 50 chr20 37869756 37870077 -34283805 + AluSq SINE Alu 1 306 -7 764 257 85 25 chr20 37870542 37870950 -34282932 + L1MCc LINE L1 1129 1566 -4889 805 233 72 0 chr20 37870966 37871202 -34282680 + L1MCc LINE L1 3312 3564 -3377 628 111 0 0 chr20 37871237 37871336 -34282546 + AluSc SINE Alu 209 307 -2 2449 204 38 68 chr20 37871338 37871772 -34282110 + L1MCc LINE L1 4059 4456 -2485 717 126 0 17 chr20 37871772 37871891 -34281991 + FLAM_C SINE Alu 2 118 -15 2449 204 38 68 chr20 37871891 37872306 -34281576 + L1MCc LINE L1 4456 4882 -2059 513 101 0 0 chr20 37872330 37872399 -34281483 + AluJ/FLAM SINE Alu 9 77 -235 381 143 0 107 chr20 37872406 37872490 -34281392 + Charlie1 DNA MER1_type 1945 2019 -742 738 172 0 0 chr20 37872490 37872606 -34281276 + AluJo/FLAM SINE Alu 3 118 -194 365 105 70 0 chr20 37872606 37872663 -34281219 - Alu SINE Alu -9 292 232 242 65 0 0 chr20 37872670 37872701 -34281181 + Charlie1 DNA MER1_type 2731 2761 0 260 247 56 34 chr20 37872712 37872801 -34281081 + L1ME LINE L1 5674 5764 -406 447 113 0 0 chr20 37872805 37872876 -34281006 + (TA)n Simple_repeat Simple_repeat 1 71 0 399 280 0 9 chr20 37873694 37873801 -34280081 + MER5A DNA MER1_type 4 109 -80 315 0 0 0 chr20 37873924 37873959 -34279923 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 431 174 31 0 chr20 37873974 37874072 -34279810 + L2 LINE L2 2446 2546 -768 847 100 8 8 chr20 37874073 37874193 -34279689 + AluSq/x SINE Alu 1 120 -192 463 238 193 6 chr20 37874242 37874423 -34279459 + L2 LINE L2 2047 2261 -1053 1582 117 5 9 chr20 38074433 38074656 -34079226 - AluSq SINE Alu -91 222 1 2274 118 0 0 chr20 38075323 38075628 -34078254 + AluSg SINE Alu 5 309 -1 246 266 166 7 chr20 38075631 38075770 -34078112 - L1ME4a LINE L1 -10 6111 5951 1316 158 0 35 chr20 38075942 38076170 -34077712 + AluJo SINE Alu 1 220 -92 229 91 0 30 chr20 38076170 38076203 -34077679 + Alu SINE Alu 85 116 -17 414 0 0 0 chr20 38076232 38076278 -34077604 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 194 236 0 14 chr20 38076328 38076400 -34077482 + (TA)n Simple_repeat Simple_repeat 1 71 0 217 167 37 0 chr20 38076436 38076490 -34077392 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 1789 118 0 16 chr20 38076633 38076718 -34077164 + AluSq SINE Alu 52 137 -176 2160 113 17 0 chr20 38076718 38077011 -34076871 + AluSp SINE Alu 1 298 -15 1789 118 0 16 chr20 38077011 38077180 -34076702 + AluSq SINE Alu 137 302 -11 2456 52 3 3 chr20 38077266 38077557 -34076325 + AluY SINE Alu 1 291 -20 21 0 0 0 chr20 38077820 38077841 -34076041 + AT_rich Low_complexity Low_complexity 1 21 0 2316 99 3 3 chr20 38077854 38078157 -34075725 + AluSp SINE Alu 1 303 -10 1784 169 0 28 chr20 38078157 38078447 -34075435 - AluJo SINE Alu -30 282 1 1896 170 0 6 chr20 38078627 38078938 -34074944 + AluJo SINE Alu 1 309 -3 2149 98 24 7 chr20 38079567 38079863 -34074019 - AluSg SINE Alu -9 301 1 189 0 0 0 chr20 38079987 38080008 -34073874 + (CA)n Simple_repeat Simple_repeat 1 21 0 198 0 0 0 chr20 38080011 38080033 -34073849 + (CCA)n Simple_repeat Simple_repeat 1 22 0 1618 176 14 24 chr20 38080457 38080746 -34073136 + AluJo SINE Alu 1 286 -26 198 191 0 0 chr20 38080746 38080788 -34073094 + (TA)n Simple_repeat Simple_repeat 1 42 0 405 240 78 32 chr20 38080796 38081035 -34072847 - L1ME3 LINE L1 -216 5950 5697 1841 148 41 32 chr20 38081040 38081113 -34072769 + Tigger2 DNA MER2_type 7 78 -2640 1783 149 57 7 chr20 38081113 38081394 -34072488 - AluJo SINE Alu -17 295 1 1841 148 41 32 chr20 38081394 38081435 -34072447 + Tigger2 DNA MER2_type 78 117 -2601 2185 134 0 3 chr20 38081435 38081748 -34072134 + AluSx SINE Alu 1 312 0 1841 148 41 32 chr20 38081748 38081977 -34071905 + Tigger2 DNA MER2_type 117 354 -2364 2418 87 0 3 chr20 38081977 38082277 -34071605 - AluSq SINE Alu -14 299 1 4207 113 13 25 chr20 38082277 38082905 -34070977 + Tigger2 DNA MER2_type 1165 1784 -934 2379 86 7 3 chr20 38082911 38083215 -34070667 + AluSc SINE Alu 1 305 -4 1638 178 0 59 chr20 38083221 38083307 -34070575 + AluJb SINE Alu 1 91 -221 2199 116 7 0 chr20 38083307 38083601 -34070281 + AluSq SINE Alu 1 296 -17 1638 178 0 59 chr20 38083601 38083620 -34070262 + AluJb SINE Alu 91 110 -202 6069 115 145 34 chr20 38083620 38084733 -34069149 - MER11B LTR ERVK 0 1236 1 1638 178 0 59 chr20 38084733 38084956 -34068926 + AluJb SINE Alu 110 312 0 6364 112 16 15 chr20 38084956 38085714 -34068168 + Tigger2 DNA MER2_type 1780 2541 -177 3384 124 52 0 chr20 38085714 38086215 -34067667 - MER1A DNA MER1_type 0 527 1 6364 112 16 15 chr20 38086215 38086390 -34067492 + Tigger2 DNA MER2_type 2541 2714 -4 278 278 0 0 chr20 38086452 38086542 -34067340 + L1MC4 LINE L1 6614 6703 -1339 351 113 0 0 chr20 38086543 38086596 -34067286 + (TA)n Simple_repeat Simple_repeat 2 54 0 2054 132 7 3 chr20 38086599 38086902 -34066980 - AluJo SINE Alu 0 312 9 372 264 30 94 chr20 38087035 38087182 -34066700 - L1ME3 LINE L1 -508 5658 5544 2308 92 0 23 chr20 38087182 38087488 -34066394 + AluSx SINE Alu 5 303 -9 372 264 30 94 chr20 38087488 38087643 -34066239 - L1ME3 LINE L1 -622 5544 5381 508 282 20 20 chr20 38087668 38087863 -34066019 + L2 LINE L2 3118 3312 -1 2158 117 3 10 chr20 38087979 38088270 -34065612 - AluSx SINE Alu -23 289 1 206 318 0 63 chr20 38088860 38089049 -34064833 + (CTCTG)n Simple_repeat Simple_repeat 3 179 0 2633 56 0 0 chr20 38089682 38089984 -34063898 + AluY SINE Alu 1 302 -9 2020 131 7 3 chr20 38090484 38090790 -34063092 - AluSx SINE Alu 0 307 1 1347 196 96 14 chr20 38092548 38092829 -34061053 + AluJo SINE Alu 6 309 -3 1085 227 21 8 chr20 38093226 38093468 -34060414 - MIR SINE MIR 0 262 18 202 264 160 9 chr20 38093568 38093674 -34060208 + L3 LINE CR1 1450 1571 -6 1830 177 0 3 chr20 38093676 38093975 -34059907 - AluJb SINE Alu -14 298 1 1983 145 0 7 chr20 38094092 38094409 -34059473 + AluJo SINE Alu 2 316 0 2280 108 3 0 chr20 38094837 38095134 -34058748 - AluSp SINE Alu -15 298 1 182 274 249 25 chr20 38095361 38095562 -34058320 - L2 LINE L2 -63 3250 3005 553 211 0 0 chr20 38095592 38095706 -34058176 + FRAM SINE Alu 50 163 -13 453 253 81 45 chr20 38095746 38095967 -34057915 - L2 LINE L2 -639 2675 2447 357 225 0 0 chr20 38095971 38096060 -34057822 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 1957 159 0 10 chr20 38096061 38096370 -34057512 - AluSx SINE Alu -6 306 1 2538 70 0 6 chr20 38096428 38096741 -34057141 - AluY SINE Alu 0 311 1 1175 69 6 91 chr20 38096757 38096932 -34056950 - AluY SINE Alu -151 160 1 365 208 16 104 chr20 38096935 38097060 -34056822 - MIR SINE MIR -115 147 34 417 230 212 18 chr20 38097415 38097693 -34056189 + L1ME4a LINE L1 5790 6121 0 2272 91 7 0 chr20 38097704 38097990 -34055892 + AluSq SINE Alu 1 288 -25 216 0 0 0 chr20 38097992 38098016 -34055866 + (TTAAA)n Simple_repeat Simple_repeat 3 26 0 2399 90 0 0 chr20 38098046 38098346 -34055536 - AluSg SINE Alu -10 300 1 1711 232 61 82 chr20 38098947 38099201 -34054681 - L1ME3 LINE L1 -1 6161 5903 2335 81 3 7 chr20 38099201 38099497 -34054385 - AluSg1 SINE Alu -14 295 1 1711 232 61 82 chr20 38099497 38099578 -34054304 - L1ME3 LINE L1 -259 5903 5822 2363 87 3 0 chr20 38099578 38099867 -34054015 + AluSp SINE Alu 1 290 -23 180 0 0 0 chr20 38099870 38099890 -34053992 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2438 94 0 0 chr20 38099898 38100197 -34053685 + AluSq SINE Alu 1 299 -14 1711 232 61 82 chr20 38100197 38100443 -34053439 - L1ME3 LINE L1 -349 5813 5571 2130 131 0 25 chr20 38100443 38100757 -34053125 + AluSx SINE Alu 1 306 -6 1711 232 61 82 chr20 38100757 38100909 -34052973 - L1ME3 LINE L1 -591 5571 5417 406 166 196 30 chr20 38100969 38101014 -34052868 - L1MC/D LINE L1 -864 5480 5444 2174 104 0 3 chr20 38101014 38101301 -34052581 - AluSg1 SINE Alu -23 286 1 406 166 196 30 chr20 38101301 38101399 -34052483 - L1MC/D LINE L1 -900 5444 5324 6160 119 165 9 chr20 38101793 38102899 -34050983 - MER52C LTR ERV1 0 1278 1 2115 117 7 0 chr20 38102940 38103260 -34050622 + AluSx SINE Alu 1 322 0 2486 48 3 0 chr20 38103450 38103743 -34050139 - AluY SINE Alu -17 294 1 929 108 0 31 chr20 38103876 38104006 -34049876 + FLAM_C SINE Alu 1 126 -17 2284 89 3 0 chr20 38104016 38104298 -34049584 + AluSp SINE Alu 1 283 -30 2217 117 10 0 chr20 38104342 38104642 -34049240 + AluSx SINE Alu 1 303 -9 1087 157 23 0 chr20 38104643 38104815 -34049067 + AluJb SINE Alu 137 312 0 1752 167 49 0 chr20 38104818 38105106 -34048776 + AluJo SINE Alu 1 302 -10 2371 93 0 10 chr20 38105199 38105499 -34048383 + AluSx SINE Alu 1 297 -15 348 238 238 49 chr20 38105536 38105582 -34048300 - MIR SINE MIR -10 252 216 2347 81 7 10 chr20 38105582 38105879 -34048003 - AluSq SINE Alu -17 296 1 348 238 238 49 chr20 38105879 38105996 -34047886 - MIR SINE MIR -46 216 58 1551 126 7 63 chr20 38106037 38106307 -34047575 + AluSx SINE Alu 50 304 -8 1899 146 0 0 chr20 38106538 38106818 -34047064 + AluJo SINE Alu 1 280 -32 2339 101 0 0 chr20 38106858 38107155 -34046727 - AluSx SINE Alu -15 297 1 2496 80 0 0 chr20 38107882 38108181 -34045701 - AluY SINE Alu -12 299 1 224 275 12 38 chr20 38108702 38108782 -34045100 - MIR3 SINE MIR -7 201 124 334 323 23 8 chr20 38109112 38109242 -34044640 - MIR SINE MIR -111 151 20 394 297 84 0 chr20 38109253 38109408 -34044474 - HAL1 LINE L1 -3 2504 2337 1723 174 42 34 chr20 38109414 38109800 -34044082 - L1ME3 LINE L1 -1 6161 5773 1342 141 0 5 chr20 38109803 38109995 -34043887 + AluSx SINE Alu 1 191 -121 2381 80 0 10 chr20 38110037 38110172 -34043710 + AluSp SINE Alu 1 136 -177 2257 98 3 13 chr20 38110172 38110478 -34043404 + AluSg SINE Alu 1 303 -7 2381 80 0 10 chr20 38110478 38110643 -34043239 + AluSp SINE Alu 136 298 -15 603 167 20 0 chr20 38110656 38110758 -34043124 + FLAM_A SINE Alu 3 106 -36 236 215 9 0 chr20 38110840 38110947 -34042935 + (TA)n Simple_repeat Simple_repeat 1 108 0 736 120 9 0 chr20 38111031 38111139 -34042743 + HY1 scRNA scRNA 1 109 -3 29 0 0 0 chr20 38111145 38111174 -34042708 + AT_rich Low_complexity Low_complexity 1 29 0 1888 152 0 7 chr20 38111442 38111744 -34042138 - AluJo SINE Alu -12 300 1 968 176 12 0 chr20 38112262 38112427 -34041455 + FAM SINE Alu 1 167 -8 1683 135 12 8 chr20 38112621 38112865 -34041017 + AluSx SINE Alu 56 300 -12 276 309 0 0 chr20 38113585 38113653 -34040229 - MIR SINE MIR -159 103 36 2353 77 3 0 chr20 38113806 38114092 -34039790 + AluSg SINE Alu 1 287 -23 1921 121 28 24 chr20 38114713 38115003 -34038879 + AluJo SINE Alu 1 291 -21 953 266 72 20 chr20 38115524 38115599 -34038283 - L1ME3 LINE L1 -330 5791 5721 2140 120 27 7 chr20 38115599 38115898 -34037984 + AluSx SINE Alu 1 305 -7 953 266 72 20 chr20 38115898 38116225 -34037657 - L1ME3 LINE L1 -400 5721 5368 2004 116 53 0 chr20 38117200 38117484 -34036398 + AluSx SINE Alu 12 310 -2 247 274 0 14 chr20 38117596 38117669 -34036213 - L2 LINE L2 -1 3312 3241 2657 11 0 0 chr20 38118842 38119163 -34034719 + AluY SINE Alu 1 321 0 2240 104 0 0 chr20 38119477 38119775 -34034107 - AluY SINE Alu -13 298 1 2275 103 0 0 chr20 38119803 38120108 -34033774 + AluSg SINE Alu 1 305 0 23 0 0 0 chr20 38120172 38120195 -34033687 + AT_rich Low_complexity Low_complexity 1 23 0 761 158 0 0 chr20 38120274 38120388 -34033494 + FLAM_C SINE Alu 1 114 -19 1723 154 67 7 chr20 38120462 38120747 -34033135 + AluJo SINE Alu 1 302 -10 2018 114 66 0 chr20 38121288 38121561 -34032321 + AluSq SINE Alu 1 291 -22 515 226 6 101 chr20 38122156 38122201 -34031681 + MER5A DNA MER1_type 30 78 -111 2184 101 20 3 chr20 38122201 38122497 -34031385 - AluSx SINE Alu -11 301 1 515 226 6 101 chr20 38122497 38122610 -34031272 + MER5A DNA MER1_type 78 173 -16 2467 92 0 0 chr20 38123544 38123848 -34030034 - AluSc SINE Alu -5 304 1 483 246 58 22 chr20 38123875 38124013 -34029869 - MIR SINE MIR -107 155 13 2163 108 10 0 chr20 38127276 38127571 -34026311 - AluSq SINE Alu -15 298 1 257 273 102 0 chr20 38128057 38128145 -34025737 - MIR SINE MIR -123 139 43 2298 93 7 0 chr20 38128397 38128698 -34025184 + AluSx SINE Alu 1 303 -9 2214 99 3 37 chr20 38128698 38129022 -34024860 + AluSq SINE Alu 1 313 0 2265 77 0 3 chr20 38129140 38129440 -34024442 + AluY SINE Alu 3 301 -10 2005 119 26 23 chr20 38129577 38129887 -34023995 - AluSx SINE Alu -1 311 1 1764 159 14 0 chr20 38129888 38130178 -34023704 - AluJo SINE Alu -1 311 18 406 245 168 7 chr20 38130189 38130344 -34023538 - MIR SINE MIR -14 248 69 2267 214 117 80 chr20 38130358 38130706 -34023176 - MER21B LTR ERV1 -33 830 496 831 114 46 38 chr20 38130706 38130837 -34023045 + FLAM_C SINE Alu 1 132 -1 2267 214 117 80 chr20 38130837 38130858 -34023024 - MER21B LTR ERV1 -367 496 477 2438 64 0 0 chr20 38130858 38131154 -34022728 + AluY SINE Alu 1 296 -15 2267 214 117 80 chr20 38131154 38131204 -34022678 - MER21B LTR ERV1 -386 477 430 2073 128 0 0 chr20 38131204 38131502 -34022380 + AluSx SINE Alu 1 298 -14 2267 214 117 80 chr20 38131502 38131870 -34022012 - MER21B LTR ERV1 -433 430 12 237 301 60 66 chr20 38132488 38132516 -34021366 + MER5A DNA MER1_type 1 28 -161 1528 180 27 3 chr20 38132516 38132810 -34021072 + AluJb SINE Alu 12 312 0 237 301 60 66 chr20 38132810 38132947 -34020935 + MER5A DNA MER1_type 28 165 -24 * 826 152 98 0 chr20 38132811 38132975 -34020907 - MER5A DNA MER1_type -9 180 1 582 238 152 0 chr20 38132993 38133144 -34020738 + MER5A DNA MER1_type 10 183 -6 240 368 48 6 chr20 38133146 38133312 -34020570 - MER5B DNA MER1_type 0 178 6 185 222 159 0 chr20 38134116 38134179 -34019703 + MIR SINE MIR 53 125 -83 1786 150 3 27 chr20 38134324 38134516 -34019366 - AluJo SINE Alu -19 293 109 189 0 0 0 chr20 38134516 38134537 -34019345 + (TGGGGG)n Simple_repeat Simple_repeat 5 25 0 1786 150 3 27 chr20 38134537 38134644 -34019238 - AluJo SINE Alu -203 109 1 198 0 0 0 chr20 38134811 38134833 -34019049 + (A)n Simple_repeat Simple_repeat 1 22 0 188 213 43 0 chr20 38134915 38134962 -34018920 + L2 LINE L2 3263 3311 -2 478 131 0 24 chr20 38135469 38135553 -34018329 + FLAM_C SINE Alu 53 134 -9 2128 93 0 0 chr20 38135753 38136032 -34017850 - AluSx SINE Alu -33 279 1 232 308 75 17 chr20 38136221 38136341 -34017541 + L2 LINE L2 3137 3263 -9 261 304 116 7 chr20 38136534 38136672 -34017210 - L2 LINE L2 -6 3307 3155 1353 197 7 21 chr20 38136689 38136817 -34017065 + AluJo SINE Alu 1 129 -183 2181 105 3 7 chr20 38136817 38137123 -34016759 + AluSp SINE Alu 1 305 -8 1353 197 7 21 chr20 38137123 38137273 -34016609 + AluJo SINE Alu 129 275 -37 315 158 0 0 chr20 38137389 38137446 -34016436 - MIR SINE MIR -108 154 98 2203 106 0 31 chr20 38137504 38137826 -34016056 - AluSx SINE Alu 0 312 1 676 231 88 16 chr20 38138820 38138889 -34014993 - MER3 DNA MER1_type 0 209 146 2281 62 3 26 chr20 38138889 38139196 -34014686 + AluSq SINE Alu 5 304 -9 676 231 88 16 chr20 38139196 38139308 -34014574 - MER3 DNA MER1_type -63 146 15 1812 143 32 0 chr20 38139397 38139676 -34014206 - AluJb SINE Alu -24 288 1 2293 74 0 26 chr20 38139819 38140130 -34013752 - AluY SINE Alu -8 303 1 2084 129 84 16 chr20 38140244 38140276 -34013606 - MLT2D LTR ERVL -8 406 378 261 0 0 0 chr20 38140276 38140305 -34013577 + (TG)n Simple_repeat Simple_repeat 2 30 0 2084 129 84 16 chr20 38140305 38140556 -34013326 - MLT2D LTR ERVL -36 378 88 2232 94 3 0 chr20 38140556 38140853 -34013029 + AluSq SINE Alu 1 298 -15 2084 129 84 16 chr20 38140853 38140948 -34012934 - MLT2D LTR ERVL -326 88 1 2093 110 0 0 chr20 38141073 38141383 -34012499 + AluSx SINE Alu 1 310 0 2091 101 0 14 chr20 38141524 38141820 -34012062 + AluSg SINE Alu 14 305 -5 1700 121 19 8 chr20 38141820 38142082 -34011800 + AluSx SINE Alu 43 309 -3 2281 86 20 0 chr20 38142207 38142508 -34011374 + AluSg SINE Alu 1 307 -3 2001 99 0 46 chr20 38142728 38143032 -34010850 - AluSx SINE Alu -18 294 5 270 0 0 0 chr20 38143048 38143078 -34010804 + (TA)n Simple_repeat Simple_repeat 2 31 0 1231 119 0 0 chr20 38143078 38143246 -34010636 - AluSp SINE Alu -12 301 131 2743 16 0 12 chr20 38143246 38143566 -34010316 - AluYb8 SINE Alu -2 316 1 468 332 75 44 chr20 38143585 38143880 -34010002 - L2 LINE L2 -32 3240 2937 816 140 21 21 chr20 38144659 38144802 -34009080 + AluJb SINE Alu 89 231 -81 244 204 20 0 chr20 38144805 38144854 -34009028 - Alu SINE Alu -14 288 239 237 65 0 0 chr20 38144885 38144916 -34008966 + (TC)n Simple_repeat Simple_repeat 2 32 0 855 191 13 19 chr20 38145253 38145410 -34008472 + FRAM SINE Alu 1 155 -21 2238 93 13 0 chr20 38145416 38145718 -34008164 + AluSq SINE Alu 1 306 -7 1031 156 0 0 chr20 38146470 38146630 -34007252 + AluJb SINE Alu 141 300 -12 248 311 82 22 chr20 38146820 38147003 -34006879 - MIR3 SINE MIR -14 194 1 203 224 79 13 chr20 38147313 38147389 -34006493 - L2 LINE L2 -188 3084 3004 214 283 7 164 chr20 38147851 38148003 -34005879 - L2 LINE L2 -1 3271 3144 1760 170 0 3 chr20 38148248 38148542 -34005340 + AluJo SINE Alu 1 293 -19 599 261 13 12 chr20 38149000 38149180 -34004702 - MIR SINE MIR -54 154 22 1832 107 6 78 chr20 38149750 38149922 -34003960 - AluSx SINE Alu -15 297 157 2067 120 0 0 chr20 38149922 38150205 -34003677 - AluSx SINE Alu -24 288 6 1832 107 6 78 chr20 38150205 38150351 -34003531 - AluSx SINE Alu -155 157 2 1730 92 4 8 chr20 38150397 38150636 -34003246 + AluSx SINE Alu 61 298 -14 1693 156 0 33 chr20 38150846 38151153 -34002729 + AluJo SINE Alu 1 297 -15 504 204 68 0 chr20 38151164 38151267 -34002615 - MER5B DNA MER1_type -52 126 17 323 220 179 36 chr20 38151267 38151435 -34002447 - MER112 DNA MER1_type -42 218 27 520 286 12 29 chr20 38151477 38151648 -34002234 + MER5A DNA MER1_type 17 184 -5 229 279 190 0 chr20 38152080 38152159 -34001723 - L2 LINE L2 -22 3250 3157 2286 72 16 3 chr20 38152829 38153134 -34000748 - AluY SINE Alu 0 311 3 1562 157 50 4 chr20 38153136 38153287 -34000595 - AluJb SINE Alu -18 294 151 2171 119 0 0 chr20 38153287 38153590 -34000292 - AluSc SINE Alu -6 303 1 1562 157 50 4 chr20 38153590 38153719 -34000163 - AluJb SINE Alu -161 151 1 929 141 0 0 chr20 38153723 38153858 -34000024 - AluSq/x SINE Alu -176 136 2 1901 139 24 0 chr20 38153858 38154152 -33999730 - AluJo SINE Alu -11 301 1 2088 117 3 7 chr20 38154178 38154485 -33999397 + AluSq SINE Alu 1 306 -7 291 241 63 51 chr20 38154607 38154686 -33999196 + L2 LINE L2 3193 3272 0 452 214 180 22 chr20 38155107 38155285 -33998597 - L2 LINE L2 -2 3311 3106 181 341 111 32 chr20 38155360 38155486 -33998396 - L2 LINE L2 -468 2846 2711 352 271 19 9 chr20 38155545 38155652 -33998230 - L2 LINE L2 -753 2561 2454 808 183 15 0 chr20 38155909 38156040 -33997842 + FLAM_A SINE Alu 1 133 0 1162 243 61 32 chr20 38156137 38156411 -33997471 - L1M4 LINE L1 -1831 4315 4050 2006 118 10 3 chr20 38156411 38156715 -33997167 - AluSx SINE Alu -6 306 1 1162 243 61 32 chr20 38156715 38156759 -33997123 - L1M4 LINE L1 -2096 4050 4009 2535 174 90 6 chr20 38156759 38157225 -33996657 + MLT1D LTR MaLR 1 505 0 1162 243 61 32 chr20 38157225 38157317 -33996565 - L1M4 LINE L1 -2137 4009 3892 1220 101 61 174 chr20 38157319 38157664 -33996218 - AluSg1 SINE Alu -3 306 1 1626 184 0 14 chr20 38157684 38157972 -33995910 - AluJb SINE Alu -28 284 1 27 0 0 0 chr20 38157984 38158011 -33995871 + AT_rich Low_complexity Low_complexity 1 27 0 832 57 0 0 chr20 38158045 38158172 -33995710 - AluSg/x SINE Alu 0 310 185 586 68 0 0 chr20 38158180 38158254 -33995628 + AluSc SINE Alu 219 292 -17 255 384 0 0 chr20 38158482 38158646 -33995236 + (CCA)n Simple_repeat Simple_repeat 3 166 0 2216 106 0 0 chr20 38158834 38159136 -33994746 + AluSg SINE Alu 1 302 -8 2125 103 27 0 chr20 38159291 38159592 -33994290 - AluSg SINE Alu 0 310 2 1052 171 45 67 chr20 38159593 38159770 -33994112 - AluJo SINE Alu -12 300 130 2304 85 0 7 chr20 38159770 38160075 -33993807 + AluY SINE Alu 1 303 -8 1052 171 45 67 chr20 38160075 38160166 -33993716 - AluJo SINE Alu -182 130 38 2206 103 0 0 chr20 38160166 38160458 -33993424 - AluSx SINE Alu -20 292 1 1776 160 23 7 chr20 38160458 38160758 -33993124 - AluSx SINE Alu -7 305 1 1907 129 13 13 chr20 38160767 38161078 -33992804 - AluSp SINE Alu -2 311 1 347 216 0 0 chr20 38161078 38161166 -33992716 - L1M4 LINE L1 -3307 2839 2752 1748 133 0 4 chr20 38161166 38161422 -33992460 + AluSg SINE Alu 1 255 -55 231 123 70 18 chr20 38161467 38161524 -33992358 - L1M4 LINE L1 -3804 2342 2283 2391 78 0 0 chr20 38161525 38161834 -33992048 - AluY SINE Alu 0 311 3 2192 73 3 3 chr20 38161839 38162126 -33991756 - AluSg SINE Alu -23 287 1 1156 142 0 0 chr20 38162138 38162314 -33991568 - AluJb SINE Alu 0 312 137 2029 113 6 29 chr20 38162315 38162626 -33991256 - AluSx SINE Alu -8 304 1 1481 131 14 0 chr20 38162637 38162859 -33991023 - AluSg/x SINE Alu -12 298 74 699 173 107 48 chr20 38162918 38163069 -33990813 + FRAM SINE Alu 1 162 -150 2277 79 0 19 chr20 38163069 38163385 -33990497 + AluSg SINE Alu 1 310 0 699 173 107 48 chr20 38163385 38163401 -33990481 + FRAM SINE Alu 162 176 0 790 243 176 10 chr20 38163621 38164024 -33989858 - L1ME3A LINE L1 -225 5945 5476 261 325 18 9 chr20 38164057 38164171 -33989711 - MIR SINE MIR 0 262 148 2154 113 0 7 chr20 38166466 38166766 -33987116 - AluSx SINE Alu -14 298 1 305 297 39 39 chr20 38168054 38168182 -33985700 - MER5B DNA MER1_type 0 178 51 198 0 0 0 chr20 38168186 38168208 -33985674 + (T)n Simple_repeat Simple_repeat 1 22 0 885 163 23 35 chr20 38168215 38168387 -33985495 - AluJb SINE Alu -142 170 1 1842 144 7 3 chr20 38168411 38168703 -33985179 + AluSx SINE Alu 1 293 -19 1812 179 60 22 chr20 38168703 38168986 -33984896 - L1MB7 LINE L1 -61 6123 5819 2251 64 20 17 chr20 38168986 38169282 -33984600 - AluY SINE Alu -14 297 1 1812 179 60 22 chr20 38169282 38169401 -33984481 - L1MB7 LINE L1 -365 5819 5706 2154 102 0 3 chr20 38169407 38169701 -33984181 - AluSq SINE Alu -20 293 1 1909 102 14 7 chr20 38170162 38170437 -33983445 + AluSq SINE Alu 1 277 -36 816 40 0 0 chr20 38170445 38170545 -33983337 + (TG)n Simple_repeat Simple_repeat 2 101 0 2090 125 0 3 chr20 38170837 38171148 -33982734 + AluSx SINE Alu 1 310 -2 1679 194 0 0 chr20 38171158 38171451 -33982431 + AluJb SINE Alu 2 294 -18 1769 81 121 15 chr20 38172172 38172444 -33981438 + AluSg SINE Alu 1 301 -9 216 235 163 31 chr20 38173158 38173256 -33980626 + MIR SINE MIR 152 262 0 27 29 0 0 chr20 38173758 38173792 -33980090 + GC_rich Low_complexity Low_complexity 1 34 0 228 330 39 19 chr20 38174412 38174515 -33979367 - MIR3 SINE MIR -46 162 58 577 219 82 0 chr20 38174596 38174742 -33979140 + MER5A DNA MER1_type 1 158 -31 189 0 0 0 chr20 38174801 38174822 -33979060 + (T)n Simple_repeat Simple_repeat 1 21 0 1732 102 4 16 chr20 38174827 38175072 -33978810 - AluSq SINE Alu -71 242 1 221 200 0 0 chr20 38175122 38175162 -33978720 - MIR SINE MIR -218 44 5 2264 105 0 16 chr20 38175273 38175588 -33978294 + AluSx SINE Alu 1 310 -2 252 223 40 25 chr20 38175856 38175910 -33977972 + MER4E LTR ERV1 1 53 -571 1527 151 3 108 chr20 38175910 38176082 -33977800 - AluJo SINE Alu -4 298 176 2032 144 0 7 chr20 38176082 38176380 -33977502 - AluSx SINE Alu -12 300 5 1527 151 3 108 chr20 38176380 38176539 -33977343 - AluJo SINE Alu -126 176 2 252 223 40 25 chr20 38176539 38176607 -33977275 + MER4E LTR ERV1 53 208 -416 * 2595 116 32 67 chr20 38176589 38176662 -33977220 + LTR29 LTR ERV1 137 211 -411 2249 68 57 0 chr20 38176662 38176941 -33976941 - AluY SINE Alu -16 295 1 2595 116 32 67 chr20 38176941 38177205 -33976677 + LTR29 LTR ERV1 211 454 -168 2354 107 0 3 chr20 38177205 38177505 -33976377 + AluSp SINE Alu 1 299 -14 2595 116 32 67 chr20 38177505 38177658 -33976224 + LTR29 LTR ERV1 454 611 -11 184 270 104 93 chr20 38177881 38178151 -33975731 - L2 LINE L2 -453 2861 2589 2544 74 0 13 chr20 38178181 38178493 -33975389 - AluSq SINE Alu -5 308 1 2018 144 3 3 chr20 38178520 38178818 -33975064 - AluSx SINE Alu -14 298 1 1821 143 3 49 chr20 38178838 38179145 -33974737 + AluJo SINE Alu 1 293 -19 3728 144 90 11 chr20 38179148 38179785 -33974097 - L1MB3 LINE L1 0 6183 5479 2405 95 0 0 chr20 38179785 38180081 -33973801 - AluSg SINE Alu -14 296 1 3728 144 90 11 chr20 38180081 38180180 -33973702 - L1MB3 LINE L1 -704 5479 5389 2463 94 13 0 chr20 38180211 38180519 -33973363 - AluSx SINE Alu 0 312 1 181 304 0 0 chr20 38181258 38181314 -33972568 - MIR SINE MIR -7 255 200 2084 138 14 0 chr20 38181317 38181614 -33972268 - AluSx SINE Alu -11 301 1 382 315 148 7 chr20 38181913 38182062 -33971820 + MER5A DNA MER1_type 19 188 -1 222 263 0 39 chr20 38182065 38182147 -33971735 + MIR SINE MIR 49 125 -99 488 253 82 14 chr20 38182176 38182322 -33971560 - MIR SINE MIR -61 201 46 2378 99 0 0 chr20 38182495 38182798 -33971084 - AluSg SINE Alu -7 303 1 243 0 0 0 chr20 38182890 38182917 -33970965 + (A)n Simple_repeat Simple_repeat 1 27 0 205 125 21 42 chr20 38182971 38183019 -33970863 + L2 LINE L2 3040 3086 -227 1076 108 0 25 chr20 38183038 38183219 -33970663 - AluSc SINE Alu 0 303 127 2355 101 0 0 chr20 38183316 38183612 -33970270 + AluSg SINE Alu 1 296 -14 2366 74 7 10 chr20 38183871 38184168 -33969714 - AluSx SINE Alu -16 296 1 25 31 0 0 chr20 38184621 38184653 -33969229 + AT_rich Low_complexity Low_complexity 1 32 0 825 173 8 0 chr20 38184665 38184798 -33969084 - FRAM SINE Alu -35 141 8 2384 90 0 7 chr20 38184864 38185165 -33968717 + AluSc SINE Alu 1 299 -10 484 242 182 61 chr20 38185282 38185513 -33968369 - MLT1K LTR MaLR -30 558 300 1664 108 52 8 chr20 38186638 38186917 -33966965 + AluSg1 SINE Alu 43 309 0 200 227 0 0 chr20 38187272 38187316 -33966566 + A-rich Low_complexity Low_complexity 1 44 0 1803 180 20 0 chr20 38188843 38189137 -33964745 + AluJo SINE Alu 1 300 -12 1111 113 0 0 chr20 38189231 38189372 -33964510 + AluSq SINE Alu 84 224 -89 1673 142 4 11 chr20 38189445 38189706 -33964176 + AluJb SINE Alu 1 259 -53 1931 173 0 0 chr20 38189713 38190008 -33963874 + AluJo SINE Alu 1 295 -17 2456 88 0 0 chr20 38190011 38190307 -33963575 + AluSg SINE Alu 1 296 -14 306 289 55 31 chr20 38190355 38190483 -33963399 - L2 LINE L2 -6 3266 3136 1196 122 29 6 chr20 38191174 38191346 -33962536 + AluSc SINE Alu 132 307 -2 325 268 95 39 chr20 38191428 38191607 -33962275 - MIR SINE MIR -53 209 21 2073 151 0 16 chr20 38191614 38191919 -33961963 - AluJb SINE Alu -12 300 1 388 250 191 12 chr20 38191919 38192081 -33961801 - MIR SINE MIR -38 224 33 2106 123 3 30 chr20 38192987 38193288 -33960594 - AluSx SINE Alu -19 293 1 181 344 0 0 chr20 38193812 38193876 -33960006 + L2 LINE L2 3193 3256 -16 290 239 23 0 chr20 38194121 38194209 -33959673 + L1MC5 LINE L1 7808 7897 -64 1571 131 131 8 chr20 38194217 38194485 -33959397 - AluSx SINE Alu 0 302 2 2150 123 7 10 chr20 38194485 38194787 -33959095 - AluSp SINE Alu -12 301 1 2216 103 17 0 chr20 38194858 38195149 -33958733 + AluSx SINE Alu 1 296 -16 251 230 40 54 chr20 38195284 38195358 -33958524 - L2 LINE L2 -9 3304 3232 2059 138 3 16 chr20 38195616 38195784 -33958098 - AluSx SINE Alu -11 301 137 2266 129 0 0 chr20 38195784 38196087 -33957795 - AluSx SINE Alu -9 303 1 2059 138 3 16 chr20 38196087 38196223 -33957659 - AluSx SINE Alu -175 137 1 913 204 0 0 chr20 38196224 38196386 -33957496 - FRAM SINE Alu 0 166 5 1470 170 43 22 chr20 38196400 38196708 -33957174 - AluSx SINE Alu 0 314 1 2239 105 7 7 chr20 38197442 38197748 -33956134 - AluSp SINE Alu -7 306 1 2156 138 0 3 chr20 38197773 38198084 -33955798 + AluSx SINE Alu 1 310 -2 2328 82 3 10 chr20 38198566 38198859 -33955023 - AluSp SINE Alu -22 291 1 2014 141 7 13 chr20 38198859 38199165 -33954717 - AluJo SINE Alu -1 311 8 262 219 62 52 chr20 38199204 38199300 -33954582 - MIR SINE MIR -79 183 87 185 312 29 65 chr20 38199832 38199970 -33953912 - MIR SINE MIR -13 249 117 2430 65 0 3 chr20 38200231 38200521 -33953361 + AluSg SINE Alu 1 289 -21 344 188 20 59 chr20 38200611 38200712 -33953170 - MIR SINE MIR -77 131 35 1963 152 7 7 chr20 38201261 38201571 -33952311 - AluSx SINE Alu -2 310 1 474 217 100 0 chr20 38201571 38201691 -33952191 - MIR SINE MIR -44 218 87 885 170 42 129 chr20 38201755 38201888 -33951994 + AluJo SINE Alu 24 167 -145 2435 89 10 0 chr20 38201888 38202191 -33951691 + AluSc SINE Alu 1 306 -3 2167 115 0 36 chr20 38202191 38202522 -33951360 + AluSx SINE Alu 1 320 0 885 170 42 129 chr20 38202522 38202697 -33951185 + AluJo SINE Alu 165 307 -5 1685 194 4 0 chr20 38202698 38202976 -33950906 + AluJb SINE Alu 2 280 -32 475 176 101 8 chr20 38202992 38203111 -33950771 + L1MB8 LINE L1 6049 6178 0 228 231 15 46 chr20 38203436 38203501 -33950381 + MIR SINE MIR 85 147 -61 2322 116 3 0 chr20 38203581 38203891 -33949991 - AluSx SINE Alu -1 311 1 240 35 0 0 chr20 38205197 38205226 -33948656 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr20 38205241 38205262 -33948620 + GC_rich Low_complexity Low_complexity 1 21 0 38 39 0 0 chr20 38205994 38206046 -33947836 + GC_rich Low_complexity Low_complexity 1 52 0 34 79 0 0 chr20 38206206 38206282 -33947600 + GC_rich Low_complexity Low_complexity 1 76 0 187 243 0 0 chr20 38207405 38207442 -33946440 - MIR SINE MIR -60 148 112 296 284 89 41 chr20 38208043 38208212 -33945670 + L1MC/D LINE L1 5588 5764 -2044 2160 106 3 23 chr20 38208418 38208721 -33945161 - AluSx SINE Alu -2 310 14 2373 92 3 0 chr20 38209107 38209400 -33944482 - AluSq SINE Alu -19 294 1 1826 162 11 8 chr20 38210121 38210591 -33943291 + Tigger1 DNA MER2_type 1 536 -1882 767 149 0 15 chr20 38210600 38210734 -33943148 - FLAM_C SINE Alu -1 132 1 1274 122 0 0 chr20 38210764 38210936 -33942946 + AluSg/x SINE Alu 129 300 -12 1835 145 21 7 chr20 38210942 38211225 -33942657 + AluJo SINE Alu 1 287 -25 941 119 0 8 chr20 38211227 38211361 -33942521 + AluSq/x SINE Alu 1 133 -179 1328 120 56 4 chr20 38211362 38211595 -33942287 + Tigger1 DNA MER2_type 578 822 -1596 2471 90 3 3 chr20 38211607 38211917 -33941965 - AluSx SINE Alu -2 310 1 1017 126 0 0 chr20 38211917 38212052 -33941830 - AluSq/x SINE Alu -178 135 1 425 267 102 37 chr20 38212161 38212348 -33941534 - HAL1 LINE L1 -1881 626 428 1703 138 84 0 chr20 38212386 38212647 -33941235 - AluSx SINE Alu -7 305 23 225 257 95 0 chr20 38212649 38212723 -33941159 - MIR SINE MIR -125 137 57 2036 205 20 70 chr20 38212741 38213024 -33940858 - L1M4 LINE L1 -2833 3313 3018 2568 71 0 0 chr20 38213024 38213334 -33940548 - AluY SINE Alu -1 310 1 2036 205 20 70 chr20 38213334 38213370 -33940512 - L1M4 LINE L1 -3128 3018 2982 2215 112 13 19 chr20 38213370 38213684 -33940198 + AluSx SINE Alu 1 312 0 2036 205 20 70 chr20 38213684 38213696 -33940186 - L1M4 LINE L1 -3164 2982 2971 1546 189 42 7 chr20 38213696 38213981 -33939901 + AluJo SINE Alu 1 295 -17 2036 205 20 70 chr20 38213981 38214311 -33939571 - L1M4 LINE L1 -3175 2971 2687 1805 180 17 0 chr20 38214311 38214611 -33939271 + AluJb SINE Alu 3 307 -5 2036 205 20 70 chr20 38214611 38214679 -33939203 - L1M4 LINE L1 -3459 2687 2617 320 217 0 0 chr20 38214805 38214874 -33939008 - L1M4 LINE L1 -3463 2683 2615 316 232 0 0 chr20 38214871 38214940 -33938942 - L1M4 LINE L1 -3463 2683 2615 * 325 203 0 0 chr20 38214937 38215006 -33938876 - L1M4 LINE L1 -3463 2683 2615 325 203 0 0 chr20 38215003 38215072 -33938810 - L1M4 LINE L1 -3463 2683 2615 315 232 0 0 chr20 38215135 38215204 -33938678 - L1M4 LINE L1 -3463 2683 2615 325 203 0 0 chr20 38215264 38215333 -33938549 - L1M4 LINE L1 -3463 2683 2615 * 340 203 0 0 chr20 38215330 38215399 -33938483 - L1M4 LINE L1 -3463 2683 2615 987 210 35 25 chr20 38215449 38215735 -33938147 - L1M4 LINE L1 -3473 2673 2385 1702 149 111 25 chr20 38216061 38216423 -33937459 + MSTD LTR MaLR 1 393 -3 1130 144 12 0 chr20 38216948 38217108 -33936774 - AluSg/x SINE Alu -20 292 131 1374 192 16 55 chr20 38217155 38217462 -33936420 - AluJb SINE Alu -14 298 4 1611 183 70 0 chr20 38217864 38218137 -33935745 - AluJb SINE Alu -20 292 1 1253 123 0 0 chr20 38218169 38218331 -33935551 + AluSg/x SINE Alu 135 296 -16 2361 88 3 10 chr20 38218342 38218647 -33935235 - AluSq SINE Alu -10 303 1 1415 245 33 6 chr20 38218772 38219135 -33934747 + L1ME1 LINE L1 5659 6031 -135 2307 113 0 3 chr20 38219182 38219491 -33934391 - AluSg SINE Alu -2 308 1 2406 103 0 22 chr20 38219494 38219813 -33934069 - AluSx SINE Alu 0 312 1 943 149 39 39 chr20 38219816 38219988 -33933894 - AluJb SINE Alu -3 309 135 2172 106 55 0 chr20 38219988 38220280 -33933602 - AluSx SINE Alu -4 308 1 2548 70 0 0 chr20 38220534 38220835 -33933047 - AluY SINE Alu -10 301 1 837 130 16 0 chr20 38220846 38220969 -33932913 - AluJb SINE Alu -187 125 1 661 201 0 22 chr20 38221001 38221135 -33932747 + FLAM_A SINE Alu 1 131 -2 345 279 9 36 chr20 38221629 38221740 -33932142 + MIR SINE MIR 44 151 -111 1860 187 0 0 chr20 38221814 38222124 -33931758 - AluJb SINE Alu -2 310 1 2131 112 28 0 chr20 38222147 38222433 -33931449 - AluSq SINE Alu -19 294 1 1932 121 66 0 chr20 38222433 38222706 -33931176 - AluSx SINE Alu -21 291 1 294 161 32 16 chr20 38223228 38223242 -33930640 - MER46A DNA MER2_type -77 159 145 932 161 65 0 chr20 38223242 38223410 -33930472 + MER46B DNA MER2_type 1 54 -182 1480 130 0 5 chr20 38223411 38223618 -33930264 + AluJb SINE Alu 85 290 -22 2305 92 7 0 chr20 38223726 38224019 -33929863 - AluSp SINE Alu -16 297 3 302 333 91 23 chr20 38224514 38224880 -33929002 - L1ME LINE L1 -355 5809 5406 378 200 0 0 chr20 38224881 38224946 -33928936 - MER2 DNA MER2_type 0 345 281 518 129 24 0 chr20 38224948 38225033 -33928849 + FLAM_A SINE Alu 47 133 -9 2323 111 3 0 chr20 38225038 38225345 -33928537 + AluSp SINE Alu 6 313 0 2278 108 0 0 chr20 38225369 38225681 -33928201 + AluSx SINE Alu 1 312 0 712 152 0 29 chr20 38225728 38225866 -33928016 - AluJo/FRAM SINE Alu -1 311 178 2240 116 0 0 chr20 38225866 38226160 -33927722 - AluSx SINE Alu -18 294 1 2148 123 3 3 chr20 38226545 38226837 -33927045 + AluSx SINE Alu 1 292 -20 714 197 0 23 chr20 38226979 38227111 -33926771 + FLAM_A SINE Alu 1 129 -4 2254 108 19 3 chr20 38227113 38227420 -33926462 + AluSq SINE Alu 1 312 -1 1931 148 11 0 chr20 38227424 38227708 -33926174 + AluJo SINE Alu 1 287 -25 469 319 54 51 chr20 38227780 38227821 -33926061 - L1ME LINE L1 -746 5400 5361 2388 80 3 3 chr20 38227821 38228121 -33925761 + AluSc SINE Alu 1 300 -9 469 319 54 51 chr20 38228121 38228392 -33925490 - L1ME LINE L1 -785 5361 5087 430 246 57 16 chr20 38230937 38231059 -33922823 + MIR SINE MIR 23 149 -113 659 225 45 56 chr20 38231961 38232139 -33921743 - MIR SINE MIR -59 203 28 716 237 53 1 chr20 38232252 38232442 -33921440 + MIR SINE MIR 8 208 -18 2028 117 57 0 chr20 38232805 38233087 -33920795 + AluSg SINE Alu 1 298 -12 190 250 138 12 chr20 38233527 38233607 -33920275 + MIR3 SINE MIR 112 201 -7 189 205 0 0 chr20 38233682 38233721 -33920161 + MIR SINE MIR 107 145 -63 2391 68 34 0 chr20 38233759 38234053 -33919829 - AluY SINE Alu -7 304 1 2598 47 0 0 chr20 38234188 38234486 -33919396 - AluY SINE Alu -13 298 1 344 326 95 0 chr20 38235000 38235147 -33918735 + MIR SINE MIR 78 238 -24 21 36 0 0 chr20 38238209 38238237 -33915645 + GC_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr20 38238256 38238292 -33915590 + GC_rich Low_complexity Low_complexity 1 36 0 679 280 143 0 chr20 38238974 38239331 -33914551 - L2 LINE L2 -569 2745 2338 1086 255 64 22 chr20 38239331 38239466 -33914416 - L1MD3 LINE L1 0 8040 7912 224 57 0 29 chr20 38239466 38239501 -33914381 + (CATATA)n Simple_repeat Simple_repeat 1 34 0 1086 255 64 22 chr20 38239501 38239784 -33914098 - L1MD3 LINE L1 -128 7912 7616 300 91 18 0 chr20 38239799 38239854 -33914028 - L1MB3 LINE L1 -1 6182 6127 893 71 0 0 chr20 38239854 38239966 -33913916 - AluY SINE Alu -10 301 190 1657 163 3 25 chr20 38239968 38240288 -33913594 - L1MB3 LINE L1 -50 6133 5821 1561 177 3 53 chr20 38240302 38240455 -33913427 - AluJo SINE Alu -28 284 152 2530 56 0 20 chr20 38240455 38240759 -33913123 - AluY SINE Alu -13 298 1 1561 177 3 53 chr20 38240759 38240904 -33912978 - AluJo SINE Alu -160 152 1 272 148 0 98 chr20 38240904 38240965 -33912917 - AluJb SINE Alu -161 141 87 1438 124 25 106 chr20 38240969 38241291 -33912591 - L1MB3 LINE L1 -362 5821 5526 2155 130 0 3 chr20 38241291 38241592 -33912290 + AluSx SINE Alu 1 300 -12 392 228 106 16 chr20 38241592 38241715 -33912167 - L1MB3 LINE L1 -813 5333 5200 2704 194 44 47 chr20 38241718 38241973 -33911909 - L1MB7 LINE L1 -2 6182 5928 1961 136 38 0 chr20 38241973 38242260 -33911622 - AluSx SINE Alu -14 298 1 2704 194 44 47 chr20 38242260 38242707 -33911175 - L1MB7 LINE L1 -256 5928 5482 632 126 10 10 chr20 38242708 38242811 -33911071 - FLAM_A SINE Alu -18 124 22 2550 175 71 73 chr20 38242826 38242981 -33910901 - L1MB7 LINE L1 -690 5484 5330 2324 109 3 3 chr20 38242981 38243292 -33910590 + AluSq SINE Alu 1 311 -2 2550 175 71 73 chr20 38243292 38243476 -33910406 - L1MB7 LINE L1 -844 5330 5147 2379 106 0 3 chr20 38243476 38243787 -33910095 - AluSg SINE Alu 0 310 1 2550 175 71 73 chr20 38243787 38243914 -33909968 - L1MB7 LINE L1 -1027 5147 5021 2665 64 0 0 chr20 38243914 38244225 -33909657 - AluY SINE Alu 0 311 1 2550 175 71 73 chr20 38244225 38244271 -33909611 - L1MB7 LINE L1 -1153 5021 4976 1782 60 0 0 chr20 38244271 38244513 -33909369 - AluY SINE Alu 0 324 83 2550 175 71 73 chr20 38244513 38244778 -33909104 - L1MB7 LINE L1 -1198 4976 4692 2008 169 0 0 chr20 38244778 38245073 -33908809 - AluJb SINE Alu -17 295 1 2550 175 71 73 chr20 38245073 38245247 -33908635 - L1MB7 LINE L1 -1482 4692 4519 442 166 77 105 chr20 38245253 38245324 -33908558 - L1MC4 LINE L1 -740 7302 7231 1721 106 121 19 chr20 38245324 38245589 -33908293 - AluSx SINE Alu -20 292 1 442 166 77 105 chr20 38245589 38245649 -33908233 - L1MC4 LINE L1 -811 7231 7175 2338 99 0 0 chr20 38245649 38245943 -33907939 - AluSx SINE Alu -18 294 1 442 166 77 105 chr20 38245943 38245991 -33907891 - L1MC4 LINE L1 -867 7175 7127 409 219 138 0 chr20 38245997 38246120 -33907762 - L2 LINE L2 -977 2337 2198 2129 125 3 10 chr20 38246343 38246639 -33907243 - AluSx SINE Alu -18 294 1 193 234 0 0 chr20 38246817 38246864 -33907018 - L2 LINE L2 -5 3308 3262 2539 61 0 16 chr20 38247253 38247563 -33906319 - AluY SINE Alu -6 305 1 478 268 63 142 chr20 38248205 38248340 -33905542 + L1MC4 LINE L1 7436 7580 -462 2321 102 0 9 chr20 38248340 38248655 -33905227 + AluSx SINE Alu 1 312 0 478 268 63 142 chr20 38248655 38248743 -33905139 + L1MC4 LINE L1 7580 7673 -369 2054 141 0 13 chr20 38248743 38249062 -33904820 + AluJb SINE Alu 1 315 0 478 268 63 142 chr20 38249062 38249456 -33904426 + L1MC4 LINE L1 7673 8006 -36 2148 72 76 3 chr20 38250090 38250381 -33903501 + AluSx SINE Alu 1 312 0 587 170 31 37 chr20 38251058 38251220 -33902662 - MIR SINE MIR -50 212 49 2632 58 3 0 chr20 38254455 38254765 -33899117 - AluY SINE Alu 0 311 1 2266 78 7 27 chr20 38254786 38255080 -33898802 - AluSp SINE Alu -25 288 1 21 0 0 0 chr20 38255087 38255108 -33898774 + AT_rich Low_complexity Low_complexity 1 21 0 343 320 164 41 chr20 38255666 38255741 -33898141 + L1 LINE L1 3364 3428 -2718 1962 134 17 7 chr20 38255741 38256031 -33897851 + AluSx SINE Alu 1 293 -19 343 320 164 41 chr20 38256031 38256370 -33897512 + L1 LINE L1 3428 3829 -2317 332 109 18 0 chr20 38256404 38256459 -33897423 + Alu SINE Alu 2 47 -254 631 174 208 20 chr20 38256459 38256608 -33897274 + AluSg/x SINE Alu 110 286 -23 968 197 80 11 chr20 38256635 38256823 -33897059 + AluJb SINE Alu 78 278 -34 1813 121 16 4 chr20 38256926 38257182 -33896700 + AluSg SINE Alu 41 299 -11 1845 158 0 30 chr20 38257245 38257548 -33896334 + AluJo SINE Alu 5 298 -14 864 106 0 45 chr20 38258448 38258580 -33895302 + AluSq/x SINE Alu 8 133 -179 2037 117 46 0 chr20 38258582 38258863 -33895019 + AluSx SINE Alu 1 294 -18 2024 168 73 88 chr20 38258863 38259055 -33894827 + L1M3 LINE L1 5035 5228 -952 2077 133 3 7 chr20 38259055 38259349 -33894533 + AluSx SINE Alu 1 293 -19 2024 168 73 88 chr20 38259349 38259620 -33894262 + L1M3 LINE L1 5228 5501 -679 1634 167 4 25 chr20 38259620 38259895 -33893987 + AluJo SINE Alu 14 282 -30 207 0 0 0 chr20 38259898 38259921 -33893961 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 2024 168 73 88 chr20 38259921 38260253 -33893629 + L1M3 LINE L1 5503 5792 -388 479 253 176 47 chr20 38260276 38260412 -33893470 + L1M4 LINE L1 2651 2768 -3378 1612 167 0 60 chr20 38260412 38260572 -33893310 - AluJb SINE Alu -20 292 157 2408 82 0 3 chr20 38260572 38260866 -33893016 - AluSg SINE Alu -17 293 1 1612 167 0 60 chr20 38260866 38261005 -33892877 - AluJb SINE Alu -155 157 11 479 253 176 47 chr20 38261005 38261318 -33892564 + L1M4 LINE L1 2768 3158 -2988 2015 115 20 20 chr20 38261462 38261757 -33892125 - AluSq SINE Alu -17 296 2 449 269 110 13 chr20 38261771 38261998 -33891884 + L1M4 LINE L1 3589 3837 -2309 1606 104 0 0 chr20 38262135 38262336 -33891546 + AluSx SINE Alu 1 201 -111 2076 103 7 0 chr20 38262336 38262605 -33891277 - AluSq SINE Alu -40 273 1 609 144 93 36 chr20 38262637 38262776 -33891106 + AluY SINE Alu 2 148 -163 803 153 0 0 chr20 38262782 38262893 -33890989 - AluJb SINE Alu -201 111 1 2337 101 7 3 chr20 38263010 38263317 -33890565 - AluSx SINE Alu -4 308 1 468 222 52 44 chr20 38263486 38263620 -33890262 + MLT1J LTR MaLR 31 188 -297 809 178 7 0 chr20 38263977 38264112 -33889770 + AluJo SINE Alu 1 136 -176 308 284 126 26 chr20 38264189 38264537 -33889345 + L1ME LINE L1 2154 2536 -3610 1692 251 212 56 chr20 38264672 38264988 -33888894 + L2 LINE L2 1295 1560 -1754 1766 171 7 17 chr20 38264988 38265280 -33888602 + AluJo SINE Alu 1 289 -23 1692 251 212 56 chr20 38265280 38266119 -33887763 + L2 LINE L2 1560 2721 -593 2995 9 0 0 chr20 38266119 38266435 -33887447 - AluYb8 SINE Alu -2 316 1 1692 251 212 56 chr20 38266435 38266526 -33887356 + L2 LINE L2 2721 2796 -518 1338 156 121 0 chr20 38266531 38266762 -33887120 + AluJb SINE Alu 54 312 0 1017 276 115 26 chr20 38266771 38267251 -33886631 + L2 LINE L2 2792 3311 -2 2521 83 0 0 chr20 38267352 38267654 -33886228 + AluY SINE Alu 1 302 -9 441 280 40 98 chr20 38267736 38267810 -33886072 + L1ME LINE L1 4290 4367 -1779 2261 120 0 0 chr20 38267810 38268109 -33885773 - AluSx SINE Alu -13 299 1 441 280 40 98 chr20 38268109 38268198 -33885684 + L1ME LINE L1 4367 4460 -1686 1870 180 0 3 chr20 38268198 38268487 -33885395 + AluJo SINE Alu 1 288 -24 441 280 40 98 chr20 38268487 38268844 -33885038 + L1ME LINE L1 4460 4781 -1365 1396 122 0 51 chr20 38268845 38269059 -33884823 + AluSx SINE Alu 1 203 -109 510 117 0 0 chr20 38269059 38269136 -33884746 + AluSg/x SINE Alu 67 143 -167 2078 140 10 3 chr20 38269137 38269445 -33884437 + AluSx SINE Alu 1 310 -2 2154 89 71 0 chr20 38269565 38269846 -33884036 + AluSp SINE Alu 1 301 -12 402 316 82 45 chr20 38269897 38269939 -33883943 + L1ME LINE L1 5258 5297 -873 1664 181 0 52 chr20 38269939 38270101 -33883781 - AluJo SINE Alu -17 295 155 2464 93 0 0 chr20 38270101 38270413 -33883469 - AluSx SINE Alu 0 312 1 1664 181 0 52 chr20 38270413 38270559 -33883323 - AluJo SINE Alu -157 155 3 402 316 82 45 chr20 38270559 38270980 -33882902 + L1ME LINE L1 5297 5744 -426 2502 73 7 3 chr20 38270980 38271282 -33882600 + AluSp SINE Alu 7 309 -4 402 316 82 45 chr20 38271282 38271327 -33882555 + L1ME LINE L1 5744 5786 -384 1628 254 91 26 chr20 38271456 38272022 -33881860 + MLT1G LTR MaLR 1 570 -20 189 290 200 10 chr20 38272022 38272122 -33881760 + L2 LINE L2 2917 3035 -237 2261 109 0 0 chr20 38272174 38272488 -33881394 + AluSx SINE Alu 1 314 0 2648 137 39 2 chr20 38272589 38273050 -33880832 + L1MB3 LINE L1 5706 6183 0 805 187 53 0 chr20 38273525 38273696 -33880186 + MER33 DNA MER1_type 1 180 -144 911 152 20 81 chr20 38273697 38273894 -33879988 + Tigger2a DNA MER2_type 1 185 -249 2069 143 0 13 chr20 38273894 38274209 -33879673 - AluJo SINE Alu -1 311 1 3544 153 135 26 chr20 38274359 38274415 -33879467 + L1MB4 LINE L1 5111 5160 -1020 2345 100 0 3 chr20 38274415 38274714 -33879168 + AluSg SINE Alu 1 298 -12 3544 153 135 26 chr20 38274714 38275625 -33878257 + L1MB4 LINE L1 5160 6178 -2 2405 149 74 42 chr20 38275617 38275907 -33877975 + L1MB7 LINE L1 5592 5871 -313 * 2381 60 0 25 chr20 38275907 38276222 -33877660 + AluY SINE Alu 1 307 -4 2405 149 74 42 chr20 38276222 38276490 -33877392 + L1MB7 LINE L1 5871 6175 -9 2229 99 7 3 chr20 38276677 38276980 -33876902 + AluSx SINE Alu 1 304 -8 21 57 0 0 chr20 38277006 38277041 -33876841 + AT_rich Low_complexity Low_complexity 1 35 0 1629 175 0 10 chr20 38277052 38277343 -33876539 + AluJo SINE Alu 3 290 -22 576 285 131 33 chr20 38277400 38277789 -33876093 + HAL1 LINE L1 2044 2470 -37 189 164 0 127 chr20 38278298 38278336 -33875546 + L2 LINE L2 3223 3254 -18 2296 90 0 3 chr20 38278336 38278637 -33875245 + AluSx SINE Alu 1 300 -12 189 164 0 127 chr20 38278637 38278653 -33875229 + L2 LINE L2 3254 3270 -2 601 299 55 14 chr20 38278666 38278883 -33874999 - MIR SINE MIR -26 236 11 237 292 0 0 chr20 38279935 38280000 -33873882 + GA-rich Low_complexity Low_complexity 5 69 0 243 88 0 0 chr20 38280310 38280344 -33873538 + (CGGG)n Simple_repeat Simple_repeat 3 36 0 2181 92 3 0 chr20 38283530 38283858 -33870024 + AluSp SINE Alu 1 329 0 421 148 99 12 chr20 38284407 38284521 -33869361 + L1MD2 LINE L1 5432 5559 -597 1262 122 5 0 chr20 38284529 38284717 -33869165 + AluSq SINE Alu 120 308 -5 862 150 8 0 chr20 38284737 38284870 -33869012 - AluJo SINE Alu -178 134 1 1790 150 86 48 chr20 38284870 38285290 -33868592 + L1MD2 LINE L1 5924 6359 0 379 312 78 7 chr20 38285808 38285962 -33867920 - MIR SINE MIR -31 231 67 216 0 0 0 chr20 38286022 38286046 -33867836 + (GGCTG)n Simple_repeat Simple_repeat 1 24 0 252 220 0 34 chr20 38286470 38286529 -33867353 + MIR SINE MIR 34 90 -172 206 203 51 38 chr20 38287565 38287644 -33866238 + L2 LINE L2 2907 2986 -327 1960 88 56 52 chr20 38288484 38288789 -33865093 - AluSg SINE Alu -4 306 1 2126 117 10 0 chr20 38289544 38289852 -33864030 + AluSx SINE Alu 1 311 -1 2410 206 135 19 chr20 38290410 38290830 -33863052 - MER82 DNA MER2_type 0 653 145 2037 103 35 7 chr20 38290830 38291120 -33862762 + AluSq SINE Alu 1 298 -15 2410 206 135 19 chr20 38291120 38291283 -33862599 - MER82 DNA MER2_type -508 145 2 230 333 102 34 chr20 38291294 38291441 -33862441 - MIR SINE MIR -66 196 40 2472 61 0 0 chr20 38291484 38291781 -33862101 - AluSg SINE Alu -12 298 2 772 262 137 61 chr20 38292725 38292790 -33861092 + L2 LINE L2 2698 2757 -556 2084 110 0 3 chr20 38292790 38293082 -33860800 + AluSq SINE Alu 1 291 -22 772 262 137 61 chr20 38293082 38293581 -33860301 + L2 LINE L2 2757 3312 -1 209 350 0 48 chr20 38293584 38293687 -33860195 - MIR SINE MIR -115 147 50 262 326 35 21 chr20 38294034 38294178 -33859704 + MIR3 SINE MIR 7 152 -56 248 194 134 15 chr20 38294237 38294304 -33859578 - Charlie8 DNA MER1_type -2226 191 117 918 138 28 28 chr20 38294308 38294332 -33859550 + L1MA4 LINE L1 6116 6139 -161 1526 132 128 0 chr20 38294332 38294598 -33859284 - AluJo SINE Alu -12 300 1 918 138 28 28 chr20 38294598 38294754 -33859128 + L1MA4 LINE L1 6138 6296 -4 369 277 59 17 chr20 38295550 38295669 -33858213 - MIR SINE MIR -126 136 13 2112 138 0 0 chr20 38296730 38297042 -33856840 + AluSx SINE Alu 1 312 0 187 326 139 0 chr20 38298028 38298114 -33855768 - L2 LINE L2 -41 3272 3175 541 249 96 74 chr20 38298268 38298497 -33855385 + L3 LINE CR1 1178 1411 -166 1725 163 14 3 chr20 38298690 38298979 -33854903 - AluJo SINE Alu -20 292 1 1703 156 7 24 chr20 38298982 38299270 -33854612 - AluJo SINE Alu -20 292 10 213 184 20 20 chr20 38299586 38299635 -33854247 + MIR SINE MIR 102 150 -112 196 232 258 32 chr20 38299970 38300160 -33853722 + L2 LINE L2 2832 3064 -208 229 356 106 0 chr20 38300813 38300917 -33852965 - MIR SINE MIR -72 190 76 188 276 69 0 chr20 38301316 38301374 -33852508 + MIR3 SINE MIR 99 160 -48 424 272 139 6 chr20 38301375 38301548 -33852334 + MER117 DNA MER1_type 2 197 0 288 300 39 1 chr20 38301782 38301880 -33852002 + MIR SINE MIR 42 144 -77 263 275 0 0 chr20 38302006 38302075 -33851807 - MIR SINE MIR -63 145 77 2153 102 20 0 chr20 38302309 38302612 -33851270 + AluSx SINE Alu 3 311 -1 2106 97 50 7 chr20 38302709 38303009 -33850873 + AluSp SINE Alu 1 313 0 1059 162 19 19 chr20 38303026 38303073 -33850809 + L1MB3 LINE L1 5925 5971 -212 2193 107 0 3 chr20 38303073 38303383 -33850499 + AluSx SINE Alu 1 309 -3 1059 162 19 19 chr20 38303383 38303551 -33850331 + L1MB3 LINE L1 5970 6140 -43 2162 73 38 0 chr20 38303553 38303841 -33850041 + AluSx SINE Alu 1 299 -13 2173 105 3 0 chr20 38304193 38304489 -33849393 + AluSg SINE Alu 1 297 -13 204 330 117 35 chr20 38304635 38304865 -33849017 + L2 LINE L2 3026 3274 -39 789 268 56 9 chr20 38305574 38305805 -33848077 - MIR SINE MIR -6 256 15 729 168 24 24 chr20 38305953 38306078 -33847804 + FLAM_C SINE Alu 2 126 -17 280 315 45 9 chr20 38306308 38306419 -33847463 - MIR SINE MIR -71 137 23 253 277 24 122 chr20 38307000 38307170 -33846712 + MIR3 SINE MIR 1 157 -51 1941 155 7 3 chr20 38307179 38307482 -33846400 - AluJb SINE Alu -8 304 1 2094 94 0 24 chr20 38308179 38308494 -33845388 - AluSg SINE Alu 0 309 2 455 355 47 22 chr20 38308640 38309001 -33844881 + L1MC4a LINE L1 5568 5937 -1871 232 309 154 18 chr20 38309571 38309681 -33844201 + MIR3 SINE MIR 78 202 -6 2394 87 0 0 chr20 38309920 38310231 -33843651 - AluSx SINE Alu -1 311 1 370 267 17 67 chr20 38310435 38310555 -33843327 + L2 LINE L2 3155 3268 -4 316 295 23 39 chr20 38310567 38310696 -33843186 + MIR SINE MIR 85 211 -51 319 347 32 0 chr20 38311790 38311914 -33841968 + MIR SINE MIR 124 251 -11 210 328 61 44 chr20 38312431 38312611 -33841271 + L2 LINE L2 3089 3271 -42 1080 66 18 0 chr20 38312622 38312789 -33841093 + (GA)n Simple_repeat Simple_repeat 1 170 0 232 348 80 0 chr20 38313394 38313506 -33840376 - MIR SINE MIR -109 153 33 220 355 0 41 chr20 38313509 38313630 -33840252 + MER5A DNA MER1_type 7 122 -67 326 216 10 72 chr20 38313652 38313749 -33840133 - MIR SINE MIR -66 142 52 247 262 41 57 chr20 38314227 38314349 -33839533 + MIR SINE MIR 29 148 -60 388 276 138 38 chr20 38314612 38314822 -33839060 - MIR SINE MIR -11 251 21 2236 109 0 0 chr20 38314831 38315134 -33838748 - AluSq SINE Alu -10 303 1 1659 153 0 35 chr20 38315134 38315416 -33838466 - AluJb SINE Alu -32 280 9 256 272 100 5 chr20 38315470 38315582 -33838300 - MIR SINE MIR -63 145 26 251 213 53 64 chr20 38315782 38315876 -33838006 + MIR3 SINE MIR 109 201 -7 248 254 27 55 chr20 38316220 38316330 -33837552 + MIR SINE MIR 21 127 -81 478 256 82 36 chr20 38316335 38316530 -33837352 - MIR SINE MIR -37 225 22 216 241 24 48 chr20 38316996 38317079 -33836803 + (CCCCAG)n Simple_repeat Simple_repeat 1 81 0 309 155 0 0 chr20 38317919 38317977 -33835905 + (CGGA)n Simple_repeat Simple_repeat 2 59 0 25 65 0 0 chr20 38318230 38318276 -33835606 + GC_rich Low_complexity Low_complexity 1 46 0 336 286 9 47 chr20 38318607 38318749 -33835133 + MIR SINE MIR 37 171 -64 186 235 132 0 chr20 38318950 38319018 -33834864 + MIR SINE MIR 77 153 -109 864 78 35 0 chr20 38319227 38319342 -33834540 - FLAM_C SINE Alu -12 131 13 264 281 0 11 chr20 38319448 38319540 -33834342 + MIR SINE MIR 60 149 -71 2264 83 3 0 chr20 38319631 38319921 -33833961 + AluSp SINE Alu 1 291 -22 1319 161 4 9 chr20 38319941 38320171 -33833711 + AluJo SINE Alu 82 310 -2 498 253 45 0 chr20 38320602 38320756 -33833126 + L2 LINE L2 2462 2622 -692 1400 112 29 0 chr20 38320810 38321016 -33832866 - AluSc SINE Alu 0 309 98 887 66 0 0 chr20 38321016 38321122 -33832760 + AluSq/x SINE Alu 6 111 -202 367 106 0 15 chr20 38321123 38321189 -33832693 + AluSp/q SINE Alu 239 303 0 895 86 0 0 chr20 38321192 38321309 -33832573 - AluSq/x SINE Alu -195 117 1 516 241 160 26 chr20 38321310 38321606 -33832276 + L2 LINE L2 2689 3024 -289 953 96 52 0 chr20 38321607 38321743 -33832139 + AluSq/x SINE Alu 3 145 -167 2063 87 0 11 chr20 38321743 38321857 -33832025 + AluY SINE Alu 21 135 -176 2092 85 51 20 chr20 38321857 38322152 -33831730 + AluSq SINE Alu 1 304 -9 2063 87 0 11 chr20 38322152 38322313 -33831569 + AluY SINE Alu 135 293 -18 426 356 71 7 chr20 38322313 38322594 -33831288 + L2 LINE L2 3013 3311 -2 242 279 279 0 chr20 38323440 38323562 -33830320 - MER117 DNA MER1_type -41 156 1 203 364 27 0 chr20 38323844 38323954 -33829928 - MIR3 SINE MIR -14 194 82 272 299 0 11 chr20 38324183 38324270 -33829612 + GA-rich Low_complexity Low_complexity 4 89 0 185 204 34 23 chr20 38324312 38324400 -33829482 + GA-rich Low_complexity Low_complexity 1 89 0 427 245 0 72 chr20 38325047 38325186 -33828696 + MER91B DNA MER1_type 1 129 -61 241 200 0 50 chr20 38325206 38325253 -33828629 + MER91B DNA MER1_type 94 139 -51 2324 88 41 0 chr20 38325253 38325547 -33828335 - AluSx SINE Alu -4 308 3 241 200 0 50 chr20 38325547 38325559 -33828323 + MER91B DNA MER1_type 139 150 -40 2487 99 0 0 chr20 38325574 38325887 -33827995 - AluSq SINE Alu 0 313 1 1762 157 60 0 chr20 38325889 38326170 -33827712 - AluJb SINE Alu -14 298 1 334 137 0 0 chr20 38326174 38326225 -33827657 - Alu SINE Alu -12 290 240 525 152 191 0 chr20 38326238 38326343 -33827539 - FLAM_C SINE Alu -17 126 2 2482 95 0 0 chr20 38326405 38326711 -33827171 + AluSx SINE Alu 1 306 -6 2021 151 20 0 chr20 38326728 38327020 -33826862 + AluSx SINE Alu 1 298 -14 1832 179 0 3 chr20 38327058 38327354 -33826528 + AluJo SINE Alu 1 295 -17 2229 101 24 0 chr20 38327483 38327771 -33826111 + AluSp SINE Alu 6 300 -13 2298 82 0 7 chr20 38327887 38328169 -33825713 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr20 38328169 38328189 -33825693 + (CAAT)n Simple_repeat Simple_repeat 4 23 0 2361 99 0 0 chr20 38329026 38329318 -33824564 - AluSq SINE Alu -17 296 5 502 222 96 133 chr20 38329323 38329737 -33824145 + MLT1H LTR MaLR 24 409 0 2242 128 0 0 chr20 38330590 38330886 -33822996 - AluSx SINE Alu -16 296 1 286 409 30 0 chr20 38330937 38331101 -33822781 - MIR SINE MIR 0 262 94 1675 189 20 0 chr20 38331162 38331464 -33822418 - AluJb SINE Alu -4 308 1 1351 74 42 44 chr20 38331518 38331747 -33822135 - L1PA8 LINE L1 -62 6107 5872 2059 153 3 0 chr20 38331817 38332111 -33821771 + AluSx SINE Alu 1 295 -17 263 151 0 57 chr20 38333023 38333076 -33820806 + MIR3 SINE MIR 108 157 -51 330 348 18 0 chr20 38333124 38333236 -33820646 + MER117 DNA MER1_type 81 194 -3 345 303 10 0 chr20 38333238 38333337 -33820545 - MIR3 SINE MIR -51 157 58 264 224 61 41 chr20 38333828 38333926 -33819956 + MIR SINE MIR 46 145 -63 2483 78 0 0 chr20 38334019 38334314 -33819568 - AluSg SINE Alu -15 295 1 321 231 0 0 chr20 38334318 38334383 -33819499 - MER3 DNA MER1_type 0 209 145 1029 144 125 43 chr20 38334383 38334591 -33819291 + AluJo SINE Alu 86 310 -2 2069 135 3 0 chr20 38334600 38334888 -33818994 + AluSx SINE Alu 3 291 -21 615 174 77 71 chr20 38334894 38334961 -33818921 - MER3 DNA MER1_type -6 156 91 2008 136 30 3 chr20 38334961 38335256 -33818626 + AluJb SINE Alu 1 303 -9 615 174 77 71 chr20 38335256 38335343 -33818539 - MER3 DNA MER1_type -71 91 1 750 285 42 0 chr20 38335502 38335716 -33818166 + MIR SINE MIR 25 247 -15 248 308 22 22 chr20 38335823 38335914 -33817968 - MIR SINE MIR -15 247 157 255 237 54 11 chr20 38336026 38336119 -33817763 + MIR SINE MIR 27 123 -85 248 258 0 15 chr20 38336507 38336573 -33817309 - MIR3 SINE MIR -43 165 101 2428 92 3 0 chr20 38337044 38337347 -33816535 + AluSp SINE Alu 1 304 -9 341 264 7 29 chr20 38337703 38337843 -33816039 + (CAGAGA)n Simple_repeat Simple_repeat 2 138 0 1135 284 107 16 chr20 38337878 38338471 -33815411 - L2 LINE L2 -3 3310 2655 384 279 97 19 chr20 38338865 38339019 -33814863 + MIR SINE MIR 32 197 -65 406 302 81 0 chr20 38339175 38339370 -33814512 - MIR SINE MIR 0 262 43 474 262 97 44 chr20 38340232 38340438 -33813444 + MIR SINE MIR 46 262 0 341 260 13 0 chr20 38340541 38340618 -33813264 - MIR3 SINE MIR -8 200 123 1175 79 0 4 chr20 38340620 38340834 -33813048 + AluSx SINE Alu 2 305 -7 803 186 0 0 chr20 38340846 38340975 -33812907 + AluJ SINE Alu 1 129 -183 204 182 167 0 chr20 38340988 38341054 -33812828 - MIR SINE MIR -66 142 66 284 70 23 0 chr20 38341115 38341158 -33812724 + (TA)n Simple_repeat Simple_repeat 2 45 0 2056 139 7 0 chr20 38341158 38341446 -33812436 - AluSx SINE Alu -22 290 1 964 153 25 31 chr20 38341446 38341609 -33812273 + AluJ SINE Alu 118 279 -33 2524 71 3 0 chr20 38342694 38343002 -33810880 - AluSx SINE Alu -2 310 2 242 341 87 0 chr20 38343899 38344025 -33809857 - MIR3 SINE MIR -29 179 43 2163 128 3 0 chr20 38345295 38345591 -33808291 + AluSq SINE Alu 1 297 -16 2161 100 23 23 chr20 38345593 38345892 -33807990 + AluSq SINE Alu 2 300 -13 286 237 114 38 chr20 38345984 38346115 -33807767 - L3 LINE CR1 -216 1361 1221 352 333 35 0 chr20 38346377 38346491 -33807391 - L2 LINE L2 -17 3255 3138 205 170 94 0 chr20 38346686 38346739 -33807143 - MIR SINE MIR -60 148 91 1654 269 103 40 chr20 38347992 38348563 -33805319 - MER115 DNA AcHobo -1 692 158 2435 106 0 0 chr20 38348563 38348865 -33805017 - AluSx SINE Alu -10 302 1 510 213 39 16 chr20 38348872 38348999 -33804883 - FLAM_C SINE Alu 0 133 4 1654 269 103 40 chr20 38348999 38349070 -33804812 - MER115 DNA AcHobo -540 153 1 215 167 0 0 chr20 38349342 38349378 -33804504 + MIR SINE MIR 113 148 -114 255 195 38 16 chr20 38349528 38349620 -33804262 - L2 LINE L2 -355 2917 2828 1089 166 237 76 chr20 38349661 38349831 -33804051 + MLT1D LTR MaLR 1 142 -363 2161 127 6 13 chr20 38349831 38350145 -33803737 + AluSx SINE Alu 1 312 0 1089 166 237 76 chr20 38350145 38350159 -33803723 + MLT1D LTR MaLR 142 152 -353 2141 113 7 3 chr20 38350159 38350469 -33803413 + AluSx SINE Alu 1 311 0 1089 166 237 76 chr20 38350469 38350578 -33803304 + MLT1D LTR MaLR 152 242 -263 819 142 0 0 chr20 38350578 38350705 -33803177 + FLAM_C SINE Alu 1 127 -6 1089 166 237 76 chr20 38350705 38350775 -33803107 + MLT1D LTR MaLR 242 426 -79 190 211 0 26 chr20 38350827 38350865 -33803017 - MIR SINE MIR -138 70 34 783 115 96 25 chr20 38351181 38351338 -33802544 + MER3 DNA MER1_type 42 209 0 2277 118 0 3 chr20 38351564 38351877 -33802005 - AluSx SINE Alu 0 312 1 620 169 42 0 chr20 38351897 38352015 -33801867 - L1MB5 LINE L1 -6 6168 6046 234 91 0 0 chr20 38352015 38352048 -33801834 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 2114 128 7 3 chr20 38352051 38352341 -33801541 - AluSg SINE Alu -19 291 1 1739 147 30 47 chr20 38352343 38352642 -33801240 - AluJo SINE Alu -18 294 1 526 194 0 32 chr20 38352646 38352770 -33801112 - L1MB5 LINE L1 -117 6057 5938 4861 144 12 45 chr20 38352785 38352991 -33800891 - L1MB4 LINE L1 -2 6178 5967 2206 112 3 26 chr20 38352991 38353303 -33800579 - AluSx SINE Alu -6 306 2 4861 144 12 45 chr20 38353303 38353696 -33800186 - L1MB4 LINE L1 -213 5967 5622 2224 97 10 3 chr20 38353696 38353994 -33799888 - AluSg SINE Alu -10 300 1 4861 144 12 45 chr20 38353994 38354395 -33799487 - L1MB4 LINE L1 -558 5622 5209 1742 146 0 0 chr20 38354559 38354812 -33799070 + AluSx SINE Alu 58 310 -2 306 293 61 20 chr20 38354909 38355056 -33798826 + LTR16A1 LTR ERVL 1 153 -304 273 211 184 53 chr20 38355058 38355172 -33798710 + L2 LINE L2 2273 2401 -913 1116 236 72 4 chr20 38355172 38355448 -33798434 + LTR16A LTR ERVL 151 445 -5 269 300 63 18 chr20 38355448 38355560 -33798322 + MIR SINE MIR 38 153 -62 2068 97 8 0 chr20 38355570 38355838 -33798044 - AluSx SINE Alu -22 290 21 2302 102 20 0 chr20 38356054 38356358 -33797524 - AluSx SINE Alu -2 310 1 327 325 17 8 chr20 38356359 38356476 -33797406 + MIR3 SINE MIR 48 165 -43 284 330 10 0 chr20 38357153 38357250 -33796632 + L3 LINE CR1 956 1053 -524 1244 254 102 18 chr20 38357505 38358013 -33795869 + L2 LINE L2 2068 2618 -696 2175 122 7 7 chr20 38358060 38358364 -33795518 - AluSx SINE Alu -8 304 1 1823 153 3 36 chr20 38358384 38358548 -33795334 - AluJb SINE Alu -21 291 140 2412 81 3 3 chr20 38358548 38358846 -33795036 - AluSp SINE Alu -15 298 1 1823 153 3 36 chr20 38358846 38358982 -33794900 - AluJb SINE Alu -172 140 1 447 310 146 0 chr20 38359002 38359228 -33794654 + L2 LINE L2 2827 3085 -228 307 191 176 0 chr20 38359483 38359551 -33794331 - MIR SINE MIR -14 248 169 2172 175 73 64 chr20 38359578 38360109 -33793773 + MLT1F LTR MaLR 3 538 -4 1889 158 13 28 chr20 38360110 38360427 -33793455 + AluJo SINE Alu 1 312 0 2172 143 16 0 chr20 38361176 38361483 -33792399 - AluSx SINE Alu 0 312 1 1965 144 7 0 chr20 38361935 38362236 -33791646 - AluSx SINE Alu 0 308 6 2370 113 0 0 chr20 38363240 38363542 -33790340 + AluSx SINE Alu 1 302 -10 2260 116 13 7 chr20 38363806 38364116 -33789766 + AluSx SINE Alu 1 312 0 2382 80 10 16 chr20 38364190 38364501 -33789381 + AluSp SINE Alu 1 309 -4 722 173 208 0 chr20 38364579 38364752 -33789130 - MER3 DNA MER1_type 0 209 1 2111 149 3 13 chr20 38365476 38365791 -33788091 + AluJb SINE Alu 1 312 0 2324 96 0 20 chr20 38365965 38366268 -33787614 + AluSg SINE Alu 1 297 -13 1157 139 0 0 chr20 38366271 38366436 -33787446 + AluSg/x SINE Alu 134 298 -12 2225 82 10 16 chr20 38366437 38366764 -33787118 + AluY SINE Alu 1 311 0 448 123 0 0 chr20 38366978 38367043 -33786839 + AluS SINE Alu 231 295 -16 680 89 13 146 chr20 38367520 38367561 -33786321 - MER46A DNA MER2_type -2498 233 188 2210 95 13 33 chr20 38367561 38367866 -33786016 + AluSx SINE Alu 9 307 -5 680 89 13 146 chr20 38367866 38367982 -33785900 - MER46A DNA MER2_type -2543 188 97 561 184 0 0 chr20 38367938 38368036 -33785846 + MER46A DNA MER2_type 5 102 -134 * 309 169 0 0 chr20 38368056 38368115 -33785767 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 373 190 0 13 chr20 38368137 38368216 -33785666 + MER46A DNA MER2_type 95 172 -64 2489 58 7 3 chr20 38368223 38368516 -33785366 + AluY SINE Alu 1 294 -17 661 213 0 0 chr20 38368535 38368657 -33785225 - FLAM_A SINE Alu -11 122 1 245 154 46 31 chr20 38368663 38368728 -33785154 + MIR SINE MIR 74 139 -123 2355 99 0 0 chr20 38368734 38369028 -33784854 + AluSc SINE Alu 1 294 -15 331 237 96 37 chr20 38369342 38369409 -33784473 - L2 LINE L2 -3 3310 3248 1952 214 105 15 chr20 38369409 38369950 -33783932 + MLT1E LTR MaLR 4 593 0 331 237 96 37 chr20 38369950 38370017 -33783865 - L2 LINE L2 -65 3248 3168 1950 208 77 35 chr20 38370194 38370714 -33783168 + MLT1F LTR MaLR 1 542 0 459 0 0 0 chr20 38371148 38371199 -33782683 + (TG)n Simple_repeat Simple_repeat 2 52 0 2189 133 0 0 chr20 38371205 38371506 -33782376 - AluSx SINE Alu -11 301 1 2156 118 0 3 chr20 38372146 38372434 -33781448 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr20 38372438 38372458 -33781424 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 241 226 97 90 chr20 38372462 38372514 -33781368 - L1ME4a LINE L1 -2 6119 6069 2335 105 0 3 chr20 38372514 38372818 -33781064 + AluSx SINE Alu 1 303 -9 2330 95 26 0 chr20 38372828 38373132 -33780750 + AluSx SINE Alu 1 312 0 241 226 97 90 chr20 38373132 38373223 -33780659 - L1ME4a LINE L1 -60 6061 5964 1605 194 34 14 chr20 38373427 38373721 -33780161 - AluJb SINE Alu -8 304 5 316 211 117 105 chr20 38374337 38374409 -33779473 - MIR SINE MIR -25 237 167 2155 130 7 7 chr20 38374409 38374717 -33779165 - AluSx SINE Alu -4 308 1 2141 108 7 0 chr20 38374725 38375021 -33778861 - AluSq SINE Alu -15 298 1 316 211 117 105 chr20 38375021 38375033 -33778849 - MIR SINE MIR -101 161 151 2569 42 3 0 chr20 38375033 38375342 -33778540 - AluY SINE Alu -1 310 1 316 211 117 105 chr20 38375342 38375418 -33778464 - MIR SINE MIR -111 151 65 687 210 0 0 chr20 38375419 38375538 -33778344 + FLAM_A SINE Alu 1 119 -14 2334 58 7 3 chr20 38375560 38375853 -33778029 - AluY SINE Alu -17 294 1 389 190 0 13 chr20 38375860 38375939 -33777943 - MER46A DNA MER2_type -64 172 95 309 169 0 0 chr20 38375961 38376020 -33777862 + (TGGA)n Simple_repeat Simple_repeat 2 60 0 582 184 0 0 chr20 38376040 38376138 -33777744 - MER46A DNA MER2_type -134 102 5 * 731 89 13 146 chr20 38376094 38376210 -33777672 + MER46A DNA MER2_type 97 188 -2543 2048 95 13 33 chr20 38376210 38376515 -33777367 - AluSx SINE Alu -5 307 9 731 89 13 146 chr20 38376515 38376556 -33777326 + MER46A DNA MER2_type 188 233 -3 1758 167 0 0 chr20 38377035 38377329 -33776553 - AluJb SINE Alu -18 294 1 1818 142 33 3 chr20 38377618 38377921 -33775961 + AluSx SINE Alu 1 312 0 243 318 87 24 chr20 38378142 38378394 -33775488 - L2 LINE L2 -1152 2162 1895 2315 81 0 10 chr20 38378479 38378789 -33775093 + AluY SINE Alu 1 307 -4 1552 196 20 0 chr20 38378803 38379099 -33774783 + AluJb SINE Alu 6 307 -5 519 330 22 6 chr20 38379387 38379566 -33774316 + MIR3 SINE MIR 20 201 -7 1836 163 3 0 chr20 38379819 38380126 -33773756 + AluJo SINE Alu 1 308 -4 198 103 0 0 chr20 38380126 38380155 -33773727 + (TA)n Simple_repeat Simple_repeat 2 30 0 1986 71 96 0 chr20 38380385 38380666 -33773216 + AluY SINE Alu 1 308 -3 804 143 129 0 chr20 38381022 38381162 -33772720 + AluSg/x SINE Alu 138 295 -17 352 241 35 69 chr20 38381162 38381278 -33772604 - MIR3 SINE MIR -96 112 1 1290 167 5 5 chr20 38381579 38381794 -33772088 - MER20 DNA MER1_type -4 215 1 1732 102 4 0 chr20 38382149 38382384 -33771498 + MER46A DNA MER2_type 1 236 0 1744 112 67 0 chr20 38382668 38382935 -33770947 + AluSx SINE Alu 20 304 -8 622 259 86 0 chr20 38383128 38383290 -33770592 - MER5B DNA MER1_type -2 176 1 424 257 55 0 chr20 38383299 38383408 -33770474 - MIR SINE MIR -57 151 37 810 204 93 28 chr20 38384405 38384621 -33769261 - MIR SINE MIR -1 261 32 1680 139 57 4 chr20 38384739 38385020 -33768862 + AluSg SINE Alu 1 296 -14 1491 114 79 31 chr20 38385201 38385455 -33768427 + AluSq SINE Alu 29 294 -19 2161 117 0 0 chr20 38385482 38385781 -33768101 + AluSx SINE Alu 1 299 -13 2202 87 0 35 chr20 38385794 38386105 -33767777 + AluSx SINE Alu 12 311 -1 2226 95 0 0 chr20 38386105 38386409 -33767473 + AluSg SINE Alu 1 304 -6 817 105 0 0 chr20 38386464 38386578 -33767304 + AluY SINE Alu 1 114 -197 2323 48 41 3 chr20 38386578 38386871 -33767011 + AluY SINE Alu 1 304 -7 2169 61 3 37 chr20 38387605 38387901 -33765981 - AluY SINE Alu -23 288 3 1101 196 0 4 chr20 38388200 38388376 -33765506 - AluJo SINE Alu 0 312 137 243 0 0 0 chr20 38388376 38388403 -33765479 + (TA)n Simple_repeat Simple_repeat 1 27 0 1951 151 0 0 chr20 38388405 38388717 -33765165 - AluSx SINE Alu 0 312 1 1101 196 0 4 chr20 38388717 38388766 -33765116 - AluJo SINE Alu -176 136 85 478 91 15 0 chr20 38388769 38388835 -33765047 - FRAM SINE Alu -64 112 46 1988 97 3 52 chr20 38389933 38390243 -33763639 + AluSg SINE Alu 3 297 -13 1910 82 29 7 chr20 38390380 38390659 -33763223 - AluY SINE Alu -26 285 1 24 0 0 0 chr20 38391425 38391449 -33762433 + GC_rich Low_complexity Low_complexity 1 24 0 209 322 0 0 chr20 38391656 38391715 -33762167 + MIR SINE MIR 203 261 -1 527 256 32 13 chr20 38391872 38392028 -33761854 + MIR SINE MIR 24 182 -80 25 51 0 0 chr20 38392323 38392362 -33761520 + GC_rich Low_complexity Low_complexity 1 39 0 32 0 0 0 chr20 38392456 38392488 -33761394 + GC_rich Low_complexity Low_complexity 1 32 0 234 91 0 0 chr20 38392528 38392561 -33761321 + (CGG)n Simple_repeat Simple_repeat 3 35 0 340 175 0 0 chr20 38392900 38392957 -33760925 + L2 LINE L2 3211 3267 -5 2089 72 0 7 chr20 38393216 38393519 -33760363 - AluSc SINE Alu 0 305 5 1301 97 0 41 chr20 38393565 38393760 -33760122 - AluSx SINE Alu -125 187 1 279 295 76 19 chr20 38394018 38394123 -33759759 + MIR SINE MIR 107 217 -45 229 73 195 0 chr20 38394267 38394308 -33759574 - MIR3 SINE MIR -41 167 119 2142 117 0 16 chr20 38394699 38395016 -33758866 + AluSx SINE Alu 1 312 0 1896 131 7 3 chr20 38395302 38395599 -33758283 + AluSx SINE Alu 1 298 -14 2128 94 28 0 chr20 38395651 38395939 -33757943 - AluSg SINE Alu -14 296 1 2289 84 0 0 chr20 38396329 38396627 -33757255 - AluSc SINE Alu -11 298 1 1685 161 3 3 chr20 38396805 38397097 -33756785 + AluJb SINE Alu 13 304 -8 1058 173 20 20 chr20 38397113 38397315 -33756567 + MLT1A2 LTR MaLR 173 374 0 303 323 0 40 chr20 38397634 38397758 -33756124 - MIR SINE MIR -51 211 93 1271 139 84 0 chr20 38397790 38397992 -33755890 - MER20 DNA MER1_type 0 219 1 412 245 154 27 chr20 38398090 38398278 -33755604 - MIR SINE MIR -44 218 7 238 289 114 53 chr20 38398724 38398899 -33754983 - MIR SINE MIR -42 220 38 2269 95 0 0 chr20 38399228 38399523 -33754359 - AluSx SINE Alu -13 299 5 1262 138 130 35 chr20 38399687 38399941 -33753941 - AluJo SINE Alu -34 278 1 1541 168 16 46 chr20 38399949 38400252 -33753630 - AluJo SINE Alu -18 294 1 189 0 0 0 chr20 38400740 38400761 -33753121 + (CA)n Simple_repeat Simple_repeat 2 22 0 2260 93 3 0 chr20 38400831 38401142 -33752740 + AluSx SINE Alu 1 312 0 1080 114 42 0 chr20 38401142 38401308 -33752574 + AluSp SINE Alu 134 306 -7 2190 62 0 14 chr20 38401498 38401825 -33752057 - AluY SINE Alu 0 323 1 2234 78 0 0 chr20 38401832 38402146 -33751736 - AluSq SINE Alu 0 313 1 1248 154 0 0 chr20 38403442 38403630 -33750252 - MER5A DNA MER1_type 0 189 2 318 234 31 0 chr20 38403946 38404010 -33749872 - L2 LINE L2 -6 3266 3201 299 246 0 0 chr20 38404104 38404169 -33749713 + L2 LINE L2 3208 3272 0 2176 96 10 0 chr20 38404718 38405009 -33748873 + AluSg SINE Alu 3 296 -14 666 232 7 7 chr20 38405232 38405374 -33748508 + AluJb SINE Alu 118 259 -53 1461 161 9 62 chr20 38405375 38405697 -33748185 - AluJo SINE Alu -7 305 1 1446 186 11 4 chr20 38405753 38406027 -33747855 - AluJb SINE Alu -3 309 34 1654 131 36 43 chr20 38406135 38406440 -33747442 - AluSx SINE Alu -9 303 1 2097 97 20 3 chr20 38406447 38406747 -33747135 - AluSx SINE Alu -6 306 2 417 280 179 16 chr20 38406946 38407025 -33746857 + MARNA DNA Mariner 77 142 -444 1889 139 6 22 chr20 38407025 38407342 -33746540 - AluJb SINE Alu 0 312 1 417 280 179 16 chr20 38407342 38407662 -33746220 + MARNA DNA Mariner 142 567 -19 1506 157 41 27 chr20 38408050 38408344 -33745538 + AluJo SINE Alu 1 298 -14 1943 124 7 29 chr20 38408345 38408652 -33745230 + AluSx SINE Alu 11 310 -2 2359 76 3 9 chr20 38408713 38409028 -33744854 + AluSp SINE Alu 1 313 0 1416 173 6 70 chr20 38409035 38409365 -33744517 + AluJo SINE Alu 1 309 -3 390 238 12 0 chr20 38409877 38409961 -33743921 + L2 LINE L2 2885 2969 -345 395 299 9 0 chr20 38409961 38410068 -33743814 + LTR33 LTR ERVL 1 108 -413 410 274 66 30 chr20 38410146 38410343 -33743539 + LTR33 LTR ERVL 318 521 0 495 254 168 15 chr20 38410343 38410540 -33743342 + L2 LINE L2 2964 3190 -123 2231 82 0 25 chr20 38410954 38411269 -33742613 - AluSg SINE Alu -3 307 1 867 221 72 21 chr20 38411540 38411775 -33742107 - MIR SINE MIR 0 262 16 1941 124 43 0 chr20 38412063 38412362 -33741520 + AluSx SINE Alu 1 312 0 1226 133 39 0 chr20 38412367 38412570 -33741312 + AluSg/x SINE Alu 82 292 -20 227 256 94 124 chr20 38412752 38412986 -33740896 + L2 LINE L2 2867 3093 -179 210 200 25 5 chr20 38413023 38413073 -33740809 + L2 LINE L2 3197 3288 -25 2142 200 81 46 chr20 38413097 38413238 -33740644 + MLT1F LTR MaLR 5 140 -402 2336 74 3 0 chr20 38413238 38413536 -33740346 - AluSp SINE Alu -14 299 1 2142 200 81 46 chr20 38413536 38413914 -33739968 + MLT1F LTR MaLR 140 542 0 181 237 26 0 chr20 38413995 38414033 -33739849 - L3 LINE CR1 -592 985 947 719 208 57 6 chr20 38415127 38415286 -33738596 - MER5A DNA MER1_type -22 167 1 570 186 26 9 chr20 38416875 38416988 -33736894 + MIR SINE MIR 34 148 -60 1361 151 98 15 chr20 38416988 38417253 -33736629 + L1MB4 LINE L1 5884 6170 -10 367 276 44 0 chr20 38417466 38417579 -33736303 - MIR SINE MIR -62 146 71 2189 114 0 0 chr20 38418049 38418348 -33735534 + AluSx SINE Alu 1 299 -13 749 135 0 32 chr20 38418355 38418481 -33735401 + FLAM_C SINE Alu 1 122 -11 249 0 48 24 chr20 38418488 38418530 -33735352 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 2068 106 3 0 chr20 38419730 38420023 -33733859 - AluSp SINE Alu -19 294 1 2100 119 0 0 chr20 38420024 38420317 -33733565 - AluSg SINE Alu -17 293 1 812 156 31 0 chr20 38420321 38420449 -33733433 - AluJo SINE Alu -178 134 3 2334 75 0 0 chr20 38420525 38420819 -33733063 - AluY SINE Alu -17 294 1 2344 65 0 16 chr20 38420981 38421290 -33732592 - AluY SINE Alu -7 304 1 1540 187 3 10 chr20 38421633 38421933 -33731949 - AluJb SINE Alu -14 298 1 2148 109 6 3 chr20 38422001 38422312 -33731570 + AluSx SINE Alu 1 312 0 427 151 274 47 chr20 38422377 38422483 -33731399 + FLAM_A SINE Alu 1 130 -3 2412 81 0 0 chr20 38422486 38422794 -33731088 + AluSc SINE Alu 1 308 -1 1706 161 3 26 chr20 38422810 38423114 -33730768 + AluJo SINE Alu 1 297 -15 2073 114 3 0 chr20 38423527 38423816 -33730066 + AluSx SINE Alu 11 300 -12 485 277 87 65 chr20 38423817 38424123 -33729759 + L1MC/D LINE L1 5360 5658 -2150 243 0 0 0 chr20 38424123 38424150 -33729732 + (A)n Simple_repeat Simple_repeat 1 27 0 2178 83 4 0 chr20 38424150 38424416 -33729466 + AluSp SINE Alu 1 267 -46 2234 62 44 0 chr20 38424415 38424689 -33729193 + AluYa5 SINE Alu 11 296 -15 485 277 87 65 chr20 38424416 38424731 -33729151 + L1MC/D LINE L1 5657 5737 -2071 2333 112 0 6 chr20 38424786 38425099 -33728783 + AluSx SINE Alu 1 311 -1 1995 112 54 0 chr20 38425262 38425539 -33728343 + AluSx SINE Alu 1 292 -20 2433 90 0 10 chr20 38425900 38426211 -33727671 + AluSc SINE Alu 1 308 -1 937 129 8 0 chr20 38426364 38426496 -33727386 + AluSq/x SINE Alu 1 133 -180 2178 111 0 3 chr20 38426502 38426791 -33727091 + AluSc SINE Alu 1 288 -21 1071 175 21 5 chr20 38427145 38427339 -33726543 + AluSx SINE Alu 1 197 -115 42 36 0 0 chr20 38427450 38427506 -33726376 + AT_rich Low_complexity Low_complexity 1 56 0 2102 116 24 10 chr20 38427584 38427878 -33726004 - AluSx SINE Alu -10 302 5 243 311 0 44 chr20 38427881 38427971 -33725911 - MER5A DNA MER1_type -68 121 36 186 179 26 0 chr20 38428182 38428221 -33725661 + MIR SINE MIR 113 152 -110 2115 116 3 3 chr20 38428293 38428585 -33725297 - AluSx SINE Alu -20 292 1 22 0 0 0 chr20 38431112 38431134 -33722748 + AT_rich Low_complexity Low_complexity 1 22 0 810 124 0 0 chr20 38432739 38432852 -33721030 - FLAM_C SINE Alu -5 138 26 337 252 17 92 chr20 38432914 38432975 -33720907 - L1ME LINE L1 -302 5819 5770 2056 148 17 0 chr20 38432975 38433273 -33720609 - AluSx SINE Alu -9 303 1 337 252 17 92 chr20 38433273 38433330 -33720552 - L1ME LINE L1 -351 5770 5710 2435 90 0 3 chr20 38433357 38433658 -33720224 + AluSc SINE Alu 2 301 -8 2217 126 0 0 chr20 38433670 38433972 -33719910 + AluSx SINE Alu 1 302 -10 667 176 0 24 chr20 38433994 38434119 -33719763 + FRAM SINE Alu 40 161 -15 2316 55 47 0 chr20 38434123 38434420 -33719462 + AluY SINE Alu 3 311 0 516 167 21 10 chr20 38434429 38434525 -33719357 + MIR SINE MIR 34 130 -132 2033 83 4 0 chr20 38434545 38434798 -33719084 - AluSp SINE Alu 0 313 60 280 269 19 28 chr20 38434808 38434916 -33718966 - L1ME LINE L1 -413 5708 5602 473 202 26 0 chr20 38435013 38435127 -33718755 + MLT2B1 LTR ERVL 2 118 -402 2175 113 3 14 chr20 38435131 38435424 -33718458 + AluSx SINE Alu 1 290 -22 1335 114 0 6 chr20 38435618 38435793 -33718089 - AluSx SINE Alu -138 174 1 468 297 114 9 chr20 38435798 38436017 -33717865 - MIR SINE MIR -19 243 2 409 270 113 27 chr20 38436045 38436230 -33717652 - MIR SINE MIR -2 260 60 396 228 22 0 chr20 38436786 38436878 -33717004 - MIR SINE MIR -94 168 75 405 0 0 0 chr20 38437019 38437064 -33716818 + (CA)n Simple_repeat Simple_repeat 2 46 0 405 284 8 16 chr20 38437064 38437191 -33716691 + GA-rich Low_complexity Low_complexity 3 128 0 1677 160 24 21 chr20 38437196 38437484 -33716398 - AluJo SINE Alu -23 289 1 773 175 0 0 chr20 38437698 38437824 -33716058 + FLAM_A SINE Alu 1 126 -7 2197 122 3 0 chr20 38439004 38439300 -33714582 - AluSx SINE Alu -15 297 1 2367 101 0 3 chr20 38439405 38439711 -33714171 - AluSx SINE Alu -7 305 1 217 293 178 19 chr20 38439851 38440008 -33713874 + L2 LINE L2 2977 3158 -114 546 284 36 50 chr20 38440280 38440502 -33713380 - MIR SINE MIR -3 259 41 1419 157 45 21 chr20 38441178 38441282 -33712600 - AluSx SINE Alu -64 248 148 2751 48 0 0 chr20 38441282 38441592 -33712290 - AluY SINE Alu -1 310 1 1419 157 45 21 chr20 38441592 38441729 -33712153 - AluSx SINE Alu -164 148 1 2218 129 0 7 chr20 38441730 38442039 -33711843 - AluSx SINE Alu -5 307 1 766 162 7 29 chr20 38442041 38442177 -33711705 - AluJo/FLAM SINE Alu -169 133 1 804 252 22 30 chr20 38442226 38442333 -33711549 + L1ME LINE L1 5499 5605 -516 2315 109 0 0 chr20 38442333 38442635 -33711247 - AluSg SINE Alu -8 302 1 804 252 22 30 chr20 38442635 38442797 -33711085 + L1ME LINE L1 5605 5766 -355 774 254 19 38 chr20 38443379 38443526 -33710356 + MER63A DNA MER1_type 2 145 -1543 2244 104 16 3 chr20 38443526 38443835 -33710047 + AluSq SINE Alu 1 313 0 774 254 19 38 chr20 38443835 38443900 -33709982 + MER63A DNA MER1_type 145 210 0 405 141 0 0 chr20 38444124 38444195 -33709687 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1896 130 0 0 chr20 38444196 38444449 -33709433 - AluSx SINE Alu -15 297 45 235 269 0 26 chr20 38445933 38446011 -33707871 + L2 LINE L2 3126 3201 -71 1920 141 3 50 chr20 38446053 38446221 -33707661 - AluJo SINE Alu -7 305 158 2441 105 0 0 chr20 38446221 38446527 -33707355 - AluSx SINE Alu -6 306 1 1920 141 3 50 chr20 38446527 38446678 -33707204 - AluJo SINE Alu -154 158 1 2000 134 0 3 chr20 38446810 38447094 -33706788 + AluSx SINE Alu 30 312 0 1251 221 84 7 chr20 38447134 38447432 -33706450 + LTR16C LTR ERVL 170 490 -1 312 260 165 0 chr20 38447516 38447643 -33706239 - MIR SINE MIR -89 173 26 202 261 14 87 chr20 38448015 38448153 -33705729 + (CGGGG)n Simple_repeat Simple_repeat 1 128 0 2078 119 10 3 chr20 38449361 38449656 -33704226 - AluSx SINE Alu -15 297 1 289 296 0 56 chr20 38449656 38449764 -33704118 - MIR SINE MIR -63 199 98 572 210 26 87 chr20 38449871 38450066 -33703816 + LTR16A1 LTR ERVL 176 358 -99 488 214 34 0 chr20 38450088 38450177 -33703705 - MER81 DNA DNA -1 113 22 304 235 86 12 chr20 38450192 38450273 -33703609 - MER81 DNA DNA -27 87 1 273 241 0 0 chr20 38450273 38450328 -33703554 + LTR16A1 LTR ERVL 403 457 0 1844 164 19 22 chr20 38450362 38450498 -33703384 + AluJb SINE Alu 1 136 -176 2345 84 0 3 chr20 38450498 38450810 -33703072 + AluSp SINE Alu 2 312 0 1844 164 19 22 chr20 38450810 38450983 -33702899 + AluJb SINE Alu 136 310 -2 218 103 0 26 chr20 38450987 38451026 -33702856 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 248 292 161 35 chr20 38451107 38451301 -33702581 - MIR3 SINE MIR -50 212 5 365 218 112 81 chr20 38451765 38451938 -33701944 + MIR SINE MIR 16 188 -57 833 311 44 61 chr20 38451950 38452317 -33701565 + L1MC4a LINE L1 5351 5708 -2100 995 183 0 0 chr20 38452317 38452481 -33701401 - FRAM SINE Alu -2 164 1 833 311 44 61 chr20 38452481 38452634 -33701248 + L1MC4a LINE L1 5708 5862 -1946 595 174 0 0 chr20 38452731 38452840 -33701042 + FLAM_A SINE Alu 26 134 -8 2496 72 13 0 chr20 38452960 38453266 -33700616 + AluSx SINE Alu 1 310 -2 2126 128 26 0 chr20 38453280 38453584 -33700298 + AluSx SINE Alu 1 312 0 381 234 141 31 chr20 38453696 38453824 -33700058 + MLT1K LTR MaLR 33 174 -414 * 487 279 62 50 chr20 38453822 38454001 -33699881 + MLT1K LTR MaLR 296 476 -112 2214 130 0 3 chr20 38454950 38455257 -33698625 + AluSx SINE Alu 1 306 -6 373 279 18 9 chr20 38455317 38455428 -33698454 + MIR SINE MIR 66 177 -85 255 167 8 0 chr20 38455830 38455891 -33697991 + MIR SINE MIR 61 124 -84 192 274 69 59 chr20 38456281 38456383 -33697499 + MIR SINE MIR 87 189 -73 195 405 6 18 chr20 38456806 38456974 -33696908 + L2 LINE L2 2933 3098 -174 513 132 0 0 chr20 38457635 38457711 -33696171 - AluJ/FLAM SINE Alu -235 77 2 2014 181 0 0 chr20 38457787 38458096 -33695786 - AluSx SINE Alu -3 309 1 862 112 0 17 chr20 38459026 38459142 -33694740 + AluSq/x SINE Alu 1 114 -199 1721 74 5 0 chr20 38459142 38459358 -33694524 - AluY SINE Alu -4 307 91 859 195 24 30 chr20 38459458 38459494 -33694388 - AluJb SINE Alu -144 168 133 2244 113 0 10 chr20 38459494 38459794 -33694088 - AluSx SINE Alu -15 297 1 859 195 24 30 chr20 38459794 38459926 -33693956 - AluJb SINE Alu -179 133 1 289 331 60 0 chr20 38460074 38460207 -33693675 - L2 LINE L2 -1 3312 3172 442 279 93 0 chr20 38460402 38460585 -33693297 - L2 LINE L2 -550 2764 2565 2084 115 31 10 chr20 38460663 38460951 -33692931 + AluSx SINE Alu 1 294 -18 283 276 181 0 chr20 38460953 38461069 -33692813 + MIR SINE MIR 60 196 -66 190 362 100 22 chr20 38461090 38461361 -33692521 - L2 LINE L2 -920 2394 2103 736 143 0 8 chr20 38461364 38461483 -33692399 + FLAM_C SINE Alu 1 118 -25 2119 125 3 0 chr20 38461577 38461880 -33692002 - AluY SINE Alu -5 306 3 21 0 0 0 chr20 38462113 38462134 -33691748 + GC_rich Low_complexity Low_complexity 1 21 0 310 89 18 18 chr20 38462268 38462324 -33691558 + (TCTCCC)n Simple_repeat Simple_repeat 3 58 0 1812 169 0 0 chr20 38462328 38462606 -33691276 - AluJo SINE Alu -34 278 1 1495 147 8 0 chr20 38462606 38462858 -33691024 - L1MB2 LINE L1 -346 5825 5572 2201 90 0 28 chr20 38462951 38463279 -33690603 - AluSq SINE Alu 0 322 3 1601 149 116 8 chr20 38463286 38463554 -33690328 - AluSg1 SINE Alu -6 303 7 284 240 66 66 chr20 38463579 38463700 -33690182 - MIR SINE MIR -113 149 29 270 286 48 0 chr20 38463634 38463718 -33690164 + MIR SINE MIR 51 138 -70 * 306 290 112 0 chr20 38464548 38464655 -33689227 - MIR SINE MIR -53 209 91 576 272 22 0 chr20 38464711 38464847 -33689035 + L2 LINE L2 3134 3272 0 221 271 123 57 chr20 38465231 38465353 -33688529 - MIR SINE MIR -88 174 45 1414 129 0 5 chr20 38465442 38465644 -33688238 - AluJo SINE Alu -8 304 104 432 123 0 0 chr20 38465644 38465709 -33688173 + AluS SINE Alu 1 65 -248 221 318 41 90 chr20 38465838 38465972 -33687910 + L2 LINE L2 2617 2735 -579 2435 97 0 0 chr20 38465972 38466283 -33687599 + AluSx SINE Alu 1 311 -1 221 318 41 90 chr20 38466283 38466393 -33687489 + L2 LINE L2 2735 2849 -465 2180 135 0 7 chr20 38466616 38466919 -33686963 + AluSq SINE Alu 1 301 -12 369 289 194 42 chr20 38467177 38467461 -33686421 + L2 LINE L2 2964 3290 -23 1145 180 38 0 chr20 38467463 38467674 -33686208 + AluJo SINE Alu 2 220 -92 282 120 20 0 chr20 38467674 38467724 -33686158 + AluSg/x SINE Alu 84 134 -166 1973 144 0 38 chr20 38467728 38468048 -33685834 + AluSx SINE Alu 4 311 -1 2191 115 23 0 chr20 38468255 38468559 -33685323 - AluSx SINE Alu -1 311 1 230 329 0 0 chr20 38468916 38468989 -33684893 + MIR SINE MIR 134 206 -56 239 316 44 0 chr20 38469030 38469144 -33684738 + L1ME3 LINE L1 5641 5759 -362 294 256 12 0 chr20 38469152 38469234 -33684648 + L1ME3 LINE L1 6065 6147 -15 375 78 0 0 chr20 38469387 38469438 -33684444 + (TC)n Simple_repeat Simple_repeat 1 51 0 1679 148 0 8 chr20 38469460 38469703 -33684179 - AluSq SINE Alu -72 241 1 1911 173 0 3 chr20 38470028 38470335 -33683547 + AluJb SINE Alu 1 306 -6 490 219 65 0 chr20 38470714 38470837 -33683045 - MIR3 SINE MIR -45 163 33 557 263 120 23 chr20 38470900 38471075 -33682807 - MIR SINE MIR -44 218 27 216 296 71 0 chr20 38471644 38471742 -33682140 + L2 LINE L2 3168 3272 0 453 186 10 0 chr20 38471927 38472024 -33681858 + AluSp/q SINE Alu 216 313 0 2181 104 0 58 chr20 38472147 38472474 -33681408 + AluSx SINE Alu 5 312 0 278 358 58 69 chr20 38472555 38472932 -33680950 + L2 LINE L2 2850 3222 -50 1732 188 0 22 chr20 38473159 38473297 -33680585 + AluJo SINE Alu 1 141 -171 2365 108 0 0 chr20 38473297 38473604 -33680278 + AluSx SINE Alu 1 307 -5 1732 188 0 22 chr20 38473604 38473784 -33680098 + AluJo SINE Alu 141 312 0 243 230 108 0 chr20 38475076 38475150 -33678732 - L2 LINE L2 -51 3221 3140 264 283 54 0 chr20 38475250 38475342 -33678540 + MIR SINE MIR 121 217 -45 320 262 101 18 chr20 38475388 38475537 -33678345 - MIR SINE MIR -58 204 32 2430 109 0 0 chr20 38475677 38475989 -33677893 + AluSx SINE Alu 1 312 0 24 0 0 0 chr20 38476172 38476196 -33677686 + AT_rich Low_complexity Low_complexity 1 24 0 263 264 56 14 chr20 38476484 38476556 -33677326 - L2 LINE L2 -6 3307 3233 431 266 129 26 chr20 38476571 38476904 -33676978 + LTR16A LTR ERVL 16 420 -30 837 182 0 0 chr20 38476983 38477115 -33676767 + FLAM_C SINE Alu 1 132 -1 791 203 0 0 chr20 38477210 38477338 -33676544 + AluJ SINE Alu 1 128 -174 1121 249 23 45 chr20 38477349 38477826 -33676056 + L1MC/D LINE L1 5111 5577 -754 245 301 129 0 chr20 38478089 38478182 -33675700 - MIR3 SINE MIR -48 160 56 326 233 248 16 chr20 38478267 38478396 -33675486 - MER5B DNA MER1_type 0 178 20 195 372 69 14 chr20 38478787 38478932 -33674950 + MIR3 SINE MIR 12 164 -44 357 174 0 51 chr20 38479153 38479251 -33674631 + L1MB5 LINE L1 5736 5828 -346 2226 116 3 0 chr20 38479251 38479545 -33674337 + AluSq SINE Alu 1 295 -18 2352 103 0 19 chr20 38479931 38480250 -33673632 + AluSp SINE Alu 1 313 0 1093 152 0 6 chr20 38480260 38480425 -33673457 + AluJ SINE Alu 134 297 -15 2283 116 0 3 chr20 38481449 38481750 -33672132 - AluSx SINE Alu -12 300 1 401 242 62 62 chr20 38482125 38482216 -33671666 - MIR SINE MIR -43 219 126 1929 151 3 22 chr20 38482216 38482528 -33671354 + AluJo SINE Alu 1 306 -6 401 242 62 62 chr20 38482528 38482597 -33671285 - MIR SINE MIR -135 127 59 2013 183 96 17 chr20 38482859 38483328 -33670554 + L1MB7 LINE L1 5621 6126 -58 1737 162 0 11 chr20 38483331 38483615 -33670267 - AluJo SINE Alu 0 312 32 2264 104 3 10 chr20 38483636 38483935 -33669947 - AluSq SINE Alu -16 297 1 231 106 21 21 chr20 38483937 38483984 -33669898 + L1MB8 LINE L1 6112 6158 -20 201 319 44 26 chr20 38484013 38484126 -33669756 + MIR SINE MIR 130 244 -18 248 238 24 48 chr20 38484593 38484677 -33669205 - MIR SINE MIR -6 256 175 2230 79 0 11 chr20 38484692 38484971 -33668911 - AluY SINE Alu -5 306 31 1708 165 7 7 chr20 38485329 38485632 -33668250 + AluSq SINE Alu 3 305 -8 662 193 0 0 chr20 38485632 38485741 -33668141 - FLAM_A SINE Alu -31 111 3 262 195 0 0 chr20 38485853 38485894 -33667988 + Alu SINE Alu 3 43 -260 1781 166 3 7 chr20 38485895 38486178 -33667704 + AluJo SINE Alu 1 282 -30 237 65 0 0 chr20 38486181 38486212 -33667670 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 534 308 22 16 chr20 38486265 38486450 -33667432 + MIR SINE MIR 56 241 -21 346 172 77 82 chr20 38486849 38486973 -33666909 - MIR SINE MIR -47 161 37 309 324 39 0 chr20 38487376 38487478 -33666404 + MIR SINE MIR 21 126 -136 251 83 0 42 chr20 38487523 38487571 -33666311 + (CTCA)n Simple_repeat Simple_repeat 1 46 0 313 314 12 12 chr20 38487634 38487720 -33666162 + L2 LINE L2 3187 3272 0 2284 113 0 29 chr20 38488162 38488472 -33665410 + AluSx SINE Alu 1 301 -11 386 280 129 30 chr20 38488638 38488770 -33665112 - MIR SINE MIR -99 163 19 289 200 137 32 chr20 38488837 38488932 -33664950 - MIR SINE MIR 0 262 158 1659 172 3 14 chr20 38489177 38489488 -33664394 + AluJo SINE Alu 1 308 0 2307 108 7 7 chr20 38489491 38489797 -33664085 + AluSx SINE Alu 1 306 -6 356 213 82 41 chr20 38489844 38489966 -33663916 - MIR SINE MIR -77 185 59 241 243 0 29 chr20 38490110 38490180 -33663702 + MER5A DNA MER1_type 118 185 -4 234 129 16 48 chr20 38490200 38490262 -33663620 + (CTA)n Simple_repeat Simple_repeat 2 61 0 2177 125 24 0 chr20 38490330 38490627 -33663255 + AluSx SINE Alu 1 304 -8 602 152 58 14 chr20 38490673 38490811 -33663071 - MIR SINE MIR -55 207 64 761 152 85 67 chr20 38491094 38491258 -33662624 + MER5A DNA MER1_type 13 179 -10 323 304 22 51 chr20 38491374 38491512 -33662370 - MIR SINE MIR -119 143 10 324 305 90 28 chr20 38491762 38491939 -33661943 + MIR SINE MIR 5 192 -70 460 275 76 62 chr20 38492521 38492768 -33661114 - MIR SINE MIR 0 262 12 330 313 46 15 chr20 38493065 38493196 -33660686 + MER5A DNA MER1_type 55 189 0 292 297 43 115 chr20 38493196 38493564 -33660318 + L2 LINE L2 2931 3271 -1 607 140 63 144 chr20 38494216 38494286 -33659596 + LOR1-int LTR ERV1 3392 3466 -4654 2241 128 3 0 chr20 38494286 38494590 -33659292 - AluSx SINE Alu -7 305 1 607 140 63 144 chr20 38494590 38494741 -33659141 + LOR1-int LTR ERV1 3466 3595 -4525 1113 188 5 5 chr20 38494744 38494951 -33658931 - AluSg/x SINE Alu -21 291 85 950 111 7 14 chr20 38494965 38495109 -33658773 - MER50 LTR ERV1 -482 252 110 2177 116 0 3 chr20 38495111 38495404 -33658478 - AluSc SINE Alu -17 292 1 6873 140 33 56 chr20 38495404 38495519 -33658363 - MER50-int LTR ERV1 -5940 1265 1149 247 195 0 0 chr20 38495519 38495560 -33658322 + AluSx SINE Alu 1 41 -259 5264 164 19 24 chr20 38495561 38496534 -33657348 + LTR5 LTR ERVK 1 969 0 2109 109 0 0 chr20 38496534 38496808 -33657074 + AluSx SINE Alu 35 310 -2 6873 140 33 56 chr20 38496808 38497895 -33655987 - MER50-int LTR ERV1 -6055 1150 47 2678 97 17 6 chr20 38497895 38498255 -33655627 - THE1B LTR MaLR 0 364 1 6873 140 33 56 chr20 38498255 38498298 -33655584 - MER50-int LTR ERV1 -7158 47 5 1974 196 39 32 chr20 38498303 38498768 -33655114 - MER50 LTR ERV1 -23 711 244 1077 239 10 0 chr20 38498783 38498992 -33654890 - AluSx SINE Alu -100 212 2 3664 151 3 7 chr20 38498992 38499582 -33654300 + LOR1-int LTR ERV1 3585 4172 -3948 576 134 0 0 chr20 38499601 38499683 -33654199 + AluJb SINE Alu 24 105 -207 487 148 158 0 chr20 38499683 38499784 -33654098 + MER50 LTR ERV1 1 117 -617 369 43 0 0 chr20 38499785 38499832 -33654050 + AluY SINE Alu 1 47 -255 322 138 149 23 chr20 38500008 38500095 -33653787 - MER103 DNA DNA -7 159 62 2162 113 3 0 chr20 38500179 38500471 -33653411 - AluSx SINE Alu -17 295 3 1361 141 0 10 chr20 38500610 38500809 -33653073 - AluJo SINE Alu -115 197 1 1047 205 0 70 chr20 38500975 38501204 -33652678 + AluJb SINE Alu 100 312 0 901 121 0 0 chr20 38501225 38501341 -33652541 + AluJo/FLAM SINE Alu 1 116 -186 354 104 0 0 chr20 38501341 38501389 -33652493 - Alu SINE Alu -252 48 1 1986 178 12 3 chr20 38501566 38501909 -33651973 - MER7A DNA MER2_type -1 345 2 324 0 0 0 chr20 38501910 38501946 -33651936 + (TG)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr20 38502070 38502091 -33651791 + (TG)n Simple_repeat Simple_repeat 2 22 0 225 154 0 0 chr20 38502333 38502372 -33651510 + (TG)n Simple_repeat Simple_repeat 1 39 0 226 225 0 0 chr20 38502550 38502590 -33651292 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 428 243 9 9 chr20 38503199 38503310 -33650572 - L1ME3 LINE L1 -6 6156 6046 1632 213 14 7 chr20 38503717 38504004 -33649878 + AluJo SINE Alu 12 300 -12 998 137 41 41 chr20 38504201 38504398 -33649484 + L1MB5 LINE L1 5972 6168 -6 2107 129 30 54 chr20 38504448 38504635 -33649247 - THE1B LTR MaLR 0 364 188 2269 93 4 0 chr20 38504635 38504950 -33648932 - AluSc SINE Alu 0 317 2 2107 129 30 54 chr20 38504950 38505134 -33648748 - THE1B LTR MaLR -176 188 1 7363 113 20 3 chr20 38505134 38506210 -33647672 - THE1B-int LTR MaLR 0 1580 486 448 314 103 0 chr20 38506528 38506713 -33647169 - MIR SINE MIR -9 253 50 272 280 120 10 chr20 38506706 38506806 -33647076 + L2 LINE L2 3158 3268 -4 * 1835 167 40 30 chr20 38507429 38507800 -33646082 - THE1C LTR MaLR 0 375 1 253 271 277 0 chr20 38508027 38508182 -33645700 - MIR SINE MIR -4 258 61 1124 190 0 20 chr20 38508951 38509151 -33644731 - AluJo SINE Alu -116 196 1 2277 107 17 0 chr20 38509249 38509539 -33644343 - AluSx SINE Alu -17 295 1 280 274 20 59 chr20 38509666 38509747 -33644135 + MLT1L LTR MaLR 443 517 -98 2319 112 34 57 chr20 38509747 38509954 -33643928 + MER51B LTR ERV1 1 196 -181 2414 77 0 7 chr20 38509954 38510252 -33643630 - AluSx SINE Alu -16 296 1 2319 112 34 57 chr20 38510252 38510429 -33643453 + MER51B LTR ERV1 196 376 -1 280 274 20 59 chr20 38510429 38510500 -33643382 + MLT1L LTR MaLR 517 589 -26 1102 203 61 75 chr20 38510778 38511123 -33642759 + MLT1B LTR MaLR 3 342 -48 489 242 34 96 chr20 38511123 38511219 -33642663 - LTR35 LTR ERV1 0 618 536 2297 131 0 3 chr20 38511219 38511533 -33642349 - AluSp SINE Alu 0 313 1 489 242 34 96 chr20 38511533 38511614 -33642268 - LTR35 LTR ERV1 -82 536 452 2186 129 0 3 chr20 38511617 38511919 -33641963 - AluSx SINE Alu -11 301 1 3382 100 35 37 chr20 38512003 38512515 -33641367 + MER9 LTR ERVK 1 511 0 437 110 10 70 chr20 38512527 38512627 -33641255 - LTR43 LTR ERV1 -324 278 185 232 239 0 138 chr20 38512749 38512879 -33641003 - LTR35 LTR ERV1 -506 112 1 268 204 0 0 chr20 38512879 38512923 -33640959 + MLT1B LTR MaLR 339 382 -8 1743 166 3 55 chr20 38513094 38513419 -33640463 + AluSx SINE Alu 1 308 -4 2205 120 0 0 chr20 38513927 38514218 -33639664 + AluSg SINE Alu 1 291 -19 1962 145 17 3 chr20 38514808 38515105 -33638777 + AluJo SINE Alu 1 301 -11 406 230 200 15 chr20 38515108 38515243 -33638639 + MIR SINE MIR 28 187 -75 1640 136 16 0 chr20 38515306 38515548 -33638334 + AluSx SINE Alu 3 248 -64 1570 150 23 112 chr20 38515765 38516112 -33637770 - AluYb8 SINE Alu 0 318 3 335 230 14 2 chr20 38516163 38516246 -33637636 + MIR SINE MIR 73 154 -63 257 322 82 27 chr20 38516309 38516455 -33637427 + MLT1K LTR MaLR 142 295 -293 930 205 27 137 chr20 38516496 38516777 -33637105 + L2 LINE L2 2812 3122 -191 2196 107 3 7 chr20 38516777 38517087 -33636795 - AluY SINE Alu -2 309 1 2192 138 0 0 chr20 38517097 38517402 -33636480 - AluJb SINE Alu -3 309 5 930 205 27 137 chr20 38517402 38517553 -33636329 + L2 LINE L2 3131 3206 -107 1148 206 20 122 chr20 38517654 38517861 -33636021 - AluYb8 SINE Alu 0 318 160 1962 169 0 3 chr20 38517861 38518168 -33635714 - AluJb SINE Alu -6 306 1 1148 206 20 122 chr20 38518168 38518314 -33635568 - AluYb8 SINE Alu -158 160 1 1555 203 0 40 chr20 38518322 38518643 -33635239 - AluJb SINE Alu -2 310 3 2115 93 29 7 chr20 38518668 38518969 -33634913 - AluSx SINE Alu 0 307 1 307 228 37 77 chr20 38519494 38519603 -33634279 + MIR SINE MIR 8 110 -103 2129 88 0 70 chr20 38519712 38520043 -33633839 + AluSx SINE Alu 5 312 0 2131 68 65 38 chr20 38520366 38520516 -33633366 - AluSq SINE Alu -11 302 158 2307 90 7 7 chr20 38520516 38520815 -33633067 - AluSg SINE Alu -11 299 1 2131 68 65 38 chr20 38520815 38520957 -33632925 - AluSq SINE Alu -155 158 2 1968 157 20 0 chr20 38521064 38521369 -33632513 - AluSx SINE Alu -1 311 1 225 289 26 66 chr20 38521395 38521471 -33632411 + MIR SINE MIR 7 79 -183 24 39 0 0 chr20 38523983 38524009 -33629873 + AT_rich Low_complexity Low_complexity 1 26 0 349 226 250 16 chr20 38524628 38524752 -33629130 - MER5A DNA MER1_type -25 164 12 346 221 68 126 chr20 38525164 38525354 -33628528 - Charlie8 DNA MER1_type -2238 179 1 645 121 0 0 chr20 38526041 38526132 -33627750 + AluSp/q SINE Alu 208 298 -15 2069 97 3 26 chr20 38526189 38526499 -33627383 + AluSp SINE Alu 2 304 -9 670 226 18 12 chr20 38526640 38526804 -33627078 + L1ME1 LINE L1 5504 5668 -498 859 118 0 22 chr20 38526808 38526944 -33626938 + FLAM_C SINE Alu 1 133 -10 469 118 11 11 chr20 38526953 38527046 -33626836 + (TCTCCC)n Simple_repeat Simple_repeat 3 95 0 5832 65 26 12 chr20 38527055 38528033 -33625849 + SVA Other Other 2 866 -520 6542 60 27 33 chr20 38528050 38529049 -33624833 + SVA Other Other 433 1425 0 843 151 0 0 chr20 38529049 38529175 -33624707 + AluJb SINE Alu 148 273 -39 1565 207 90 49 chr20 38529184 38529652 -33624230 + L1ME1 LINE L1 5676 6162 -4 1036 215 15 89 chr20 38529835 38530005 -33623877 - AluJo SINE Alu 0 302 166 2237 96 0 3 chr20 38530005 38530306 -33623576 - AluSg SINE Alu -10 300 1 1036 215 15 89 chr20 38530306 38530460 -33623422 - AluJo SINE Alu -136 166 2 1563 140 3 120 chr20 38532157 38532499 -33621383 - AluJb SINE Alu 0 302 1 942 101 0 0 chr20 38533279 38533417 -33620465 + L1MA3 LINE L1 6168 6305 0 2045 116 142 36 chr20 38533656 38534043 -33619839 + MSTA LTR MaLR 1 428 0 296 295 56 14 chr20 38534086 38534192 -33619690 + MIR SINE MIR 13 121 -87 1463 208 25 59 chr20 38534202 38534606 -33619276 + MLT1C LTR MaLR 1 390 -77 301 274 65 59 chr20 38535383 38535536 -33618346 - MIR SINE MIR -13 249 96 2220 113 0 0 chr20 38535575 38535886 -33617996 - AluSx SINE Alu -1 311 1 303 259 176 0 chr20 38535886 38535971 -33617911 - L1M4 LINE L1 -2119 4027 3928 2162 81 14 0 chr20 38536913 38537198 -33616684 - AluSp SINE Alu -24 289 1 1469 156 88 3 chr20 38537805 38538088 -33615794 + AluJb SINE Alu 1 307 -5 204 279 0 0 chr20 38538092 38538135 -33615747 + C-rich Low_complexity Low_complexity 2 44 0 6177 110 17 25 chr20 38538135 38539896 -33613986 + SVA Other Other 1 1381 -5 219 36 0 0 chr20 38540046 38540074 -33613808 + (A)n Simple_repeat Simple_repeat 1 28 0 235 264 0 0 chr20 38540115 38540168 -33613714 + MER5A DNA MER1_type 1 53 -136 1794 125 24 3 chr20 38540168 38540457 -33613425 - AluSx SINE Alu -17 295 1 2386 60 10 3 chr20 38540464 38540766 -33613116 - AluSg SINE Alu -6 304 1 267 189 38 0 chr20 38540768 38540821 -33613061 + MER5A DNA MER1_type 128 182 -7 2071 103 0 20 chr20 38540851 38541151 -33612731 - AluSx SINE Alu -18 294 1 368 334 64 60 chr20 38541254 38541568 -33612314 - L3 LINE CR1 -213 1364 1050 1832 79 30 75 chr20 38542198 38542503 -33611379 - AluSq SINE Alu -17 296 6 1619 150 26 19 chr20 38542728 38543035 -33610847 + AluSg SINE Alu 2 310 0 1561 168 0 8 chr20 38543132 38543400 -33610482 + AluSx SINE Alu 2 267 -45 1954 133 7 0 chr20 38543764 38544057 -33609825 - AluJb SINE Alu -17 295 1 6548 204 33 30 chr20 38544978 38545524 -33608358 - L1M3 LINE L1 -641 5539 4996 1730 139 3 62 chr20 38545524 38545697 -33608185 - AluJb SINE Alu -21 291 142 2223 113 0 0 chr20 38545697 38546006 -33607876 - AluSx SINE Alu -3 309 1 1730 139 3 62 chr20 38546006 38546141 -33607741 - AluJb SINE Alu -170 142 1 6548 204 33 30 chr20 38546141 38547115 -33606767 - L1M3 LINE L1 -1184 4996 4006 1290 213 4 4 chr20 38547115 38547354 -33606528 - MER8 DNA MER2_type 0 239 1 6548 204 33 30 chr20 38547354 38547729 -33606153 - L1M3 LINE L1 -2174 4006 3634 791 231 6 0 chr20 38548026 38548186 -33605696 - FRAM SINE Alu -8 168 8 1924 138 7 0 chr20 38548197 38548494 -33605388 - AluSx SINE Alu -13 299 1 1556 185 3 13 chr20 38548522 38548830 -33605052 + AluJo SINE Alu 1 305 -7 657 193 17 0 chr20 38549070 38549189 -33604693 - FAM SINE Alu -45 140 20 1600 149 30 17 chr20 38549217 38549512 -33604370 - AluJo SINE Alu -9 303 5 2081 124 7 0 chr20 38549546 38549853 -33604029 - AluSc SINE Alu 0 309 1 2045 96 10 7 chr20 38549859 38550151 -33603731 - AluSg SINE Alu -16 294 2 2323 98 0 0 chr20 38550153 38550459 -33603423 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 38550645 38550668 -33603214 + AT_rich Low_complexity Low_complexity 1 23 0 885 233 170 12 chr20 38550776 38551049 -33602833 + AluSg SINE Alu 1 300 0 272 67 67 0 chr20 38551090 38551135 -33602747 + GA-rich Low_complexity Low_complexity 3 50 0 1765 163 3 3 chr20 38551228 38551516 -33602366 + AluJb SINE Alu 7 294 -18 288 0 0 0 chr20 38551752 38551784 -33602098 + (TG)n Simple_repeat Simple_repeat 1 32 0 2028 99 0 21 chr20 38551784 38552066 -33601816 - AluSc SINE Alu -33 276 1 1879 144 16 0 chr20 38552797 38553102 -33600780 + AluSx SINE Alu 1 310 -2 920 193 0 0 chr20 38553168 38553334 -33600548 - AluJb SINE Alu -9 303 138 193 214 0 24 chr20 38553960 38554002 -33599880 - MIR SINE MIR -10 252 212 28 71 0 0 chr20 38554154 38554210 -33599672 + AT_rich Low_complexity Low_complexity 1 56 0 2225 100 0 0 chr20 38554216 38554516 -33599366 - AluSx SINE Alu -12 300 1 11432 96 26 0 chr20 38554706 38556246 -33597636 - THE1A-int LTR MaLR 0 1580 1 2762 73 3 0 chr20 38556248 38556591 -33597291 - THE1A LTR MaLR -11 344 1 11414 102 14 12 chr20 38557046 38558774 -33595108 - L1P3 LINE L1 -2532 3929 2198 5856 111 8 0 chr20 38558777 38559576 -33594306 - L1P3 LINE L1 -5642 819 15 2836 148 19 32 chr20 38561146 38561673 -33592209 + L1MB4 LINE L1 5661 6180 0 425 79 48 0 chr20 38562361 38562424 -33591458 - Alu SINE Alu -242 67 2 1792 173 0 0 chr20 38563016 38563311 -33590571 - AluJb SINE Alu -17 295 1 1994 141 0 3 chr20 38563803 38564107 -33589775 - AluSx SINE Alu -9 303 1 2706 3 0 0 chr20 38564462 38564762 -33589120 - AluYa8 SINE Alu -10 300 1 3259 229 86 0 chr20 38564765 38565683 -33588199 - L1 LINE L1 -1092 5054 4015 722 139 96 0 chr20 38565784 38565899 -33587983 - AluSx SINE Alu -150 162 37 3117 154 11 6 chr20 38565899 38566432 -33587450 - MSTA-int LTR MaLR -1115 536 1 2155 125 135 23 chr20 38566432 38566746 -33587136 - MSTA LTR MaLR 0 428 62 1340 218 106 24 chr20 38566746 38567076 -33586806 + LTR18A LTR ERVL 1 357 0 2155 125 135 23 chr20 38567076 38567146 -33586736 - MSTA LTR MaLR -366 62 1 185 292 0 21 chr20 38567240 38567288 -33586594 - MER5B DNA MER1_type -29 149 103 2722 145 37 29 chr20 38567320 38567384 -33586498 - LOR1a LTR ERV1 0 497 435 2184 112 3 6 chr20 38567384 38567697 -33586185 + AluSq SINE Alu 2 313 0 2722 145 37 29 chr20 38567697 38568114 -33585768 - LOR1a LTR ERV1 -62 435 12 294 59 0 0 chr20 38568114 38568148 -33585734 - LOR1a LTR ERV1 -463 34 1 318 125 0 54 chr20 38568148 38568204 -33585678 - LOR1a-int LTR ERV1 0 8120 8068 2152 122 0 3 chr20 38568207 38568518 -33585364 - AluSx SINE Alu -2 310 1 5507 140 20 32 chr20 38568587 38569290 -33584592 - LOR1a-int LTR ERV1 -145 7060 6369 2214 82 28 0 chr20 38569290 38569581 -33584301 + AluSx SINE Alu 1 299 -13 5507 140 20 32 chr20 38569581 38569771 -33584111 - LOR1a-int LTR ERV1 -836 6369 6178 2328 83 0 13 chr20 38569771 38570084 -33583798 + AluY SINE Alu 1 309 -2 5478 273 74 62 chr20 38570084 38571094 -33582788 - MER50-int LTR ERV1 -3836 3369 2373 2142 123 0 0 chr20 38571094 38571395 -33582487 + AluSx SINE Alu 1 301 -11 5478 273 74 62 chr20 38571395 38571921 -33581961 - MER50-int LTR ERV1 -4832 2373 1855 2233 69 17 0 chr20 38571921 38572210 -33581672 + AluY SINE Alu 2 295 -16 5478 273 74 62 chr20 38572210 38572749 -33581133 - MER50-int LTR ERV1 -5350 1855 1263 2155 93 0 0 chr20 38572749 38573040 -33580842 - AluSc SINE Alu -18 291 1 5478 273 74 62 chr20 38573040 38573154 -33580728 - MER50-int LTR ERV1 -5942 1263 1152 1020 165 0 0 chr20 38573155 38573319 -33580563 + AluSx SINE Alu 1 164 -148 1991 136 0 0 chr20 38573521 38573816 -33580066 + AluSg SINE Alu 1 295 -15 1866 145 17 3 chr20 38574404 38574700 -33579182 + AluJo SINE Alu 1 300 -12 191 229 311 0 chr20 38574703 38574764 -33579118 + MIR SINE MIR 28 107 -155 1578 157 0 66 chr20 38575087 38575255 -33578627 - AluJo SINE Alu -13 299 160 2227 93 20 0 chr20 38575255 38575557 -33578325 - AluSx SINE Alu -4 308 1 1578 157 0 66 chr20 38575557 38575707 -33578175 - AluJo SINE Alu -152 160 2 235 313 87 0 chr20 38575987 38576102 -33577780 + L2 LINE L2 2925 3049 -223 323 285 47 64 chr20 38576280 38576456 -33577426 + MIR SINE MIR 15 194 -14 * 378 301 151 11 chr20 38576415 38576461 -33577421 - MIR SINE MIR 0 262 224 2304 63 3 0 chr20 38576461 38576790 -33577092 - AluSx SINE Alu 0 330 1 378 301 151 11 chr20 38576790 38576928 -33576954 - MIR SINE MIR -38 224 51 1745 78 0 13 chr20 38576957 38577187 -33576695 - AluY SINE Alu -8 303 77 1786 162 30 0 chr20 38577227 38577523 -33576359 + AluJo SINE Alu 2 306 -6 2344 83 0 3 chr20 38577599 38577900 -33575982 + AluSq SINE Alu 1 300 -13 290 247 49 0 chr20 38577984 38578065 -33575817 - MIR SINE MIR -115 147 63 731 179 106 64 chr20 38578460 38578777 -33575105 + MLT1D LTR MaLR 1 303 -202 2067 114 7 7 chr20 38578777 38579075 -33574807 - AluSx SINE Alu -14 298 1 2345 54 0 14 chr20 38579080 38579377 -33574505 - AluY SINE Alu -14 297 5 731 179 106 64 chr20 38579377 38579438 -33574444 + MLT1D LTR MaLR 306 496 -9 812 285 36 97 chr20 38579461 38579481 -33574401 - L2 LINE L2 -7 3306 3286 2307 76 10 0 chr20 38579481 38579772 -33574110 + AluY SINE Alu 1 294 -17 812 285 36 97 chr20 38579772 38579941 -33573941 - L2 LINE L2 -27 3286 3108 1826 117 38 73 chr20 38579941 38580257 -33573625 + AluSx SINE Alu 1 305 -7 812 285 36 97 chr20 38580257 38580561 -33573321 - L2 LINE L2 -205 3108 2842 1255 246 38 0 chr20 38580608 38580788 -33573094 - AluJb SINE Alu -8 304 107 396 0 0 0 chr20 38580788 38580832 -33573050 + (TG)n Simple_repeat Simple_repeat 2 45 0 1255 246 38 0 chr20 38580832 38580944 -33572938 - AluJb SINE Alu -205 107 1 211 271 0 0 chr20 38581135 38581183 -33572699 + L2 LINE L2 3266 3313 0 2266 109 0 0 chr20 38581403 38581707 -33572175 + AluSx SINE Alu 1 304 -8 337 358 128 0 chr20 38582647 38582826 -33571056 + L3 LINE CR1 899 1100 -477 2288 84 0 0 chr20 38582869 38583182 -33570700 + AluSg SINE Alu 1 313 0 857 136 0 0 chr20 38583187 38583312 -33570570 + FLAM_C SINE Alu 1 125 -18 309 51 0 0 chr20 38583314 38583353 -33570529 + (TAA)n Simple_repeat Simple_repeat 2 40 0 491 119 0 0 chr20 38583397 38583464 -33570418 + AluS SINE Alu 1 67 -246 834 197 0 0 chr20 38583472 38583614 -33570268 + FRAM SINE Alu 16 157 -19 305 271 12 24 chr20 38583614 38583651 -33570231 - L1ME4a LINE L1 -26 6095 6059 1994 129 33 3 chr20 38583651 38583954 -33569928 + AluSx SINE Alu 1 312 0 305 271 12 24 chr20 38583954 38584001 -33569881 - L1ME4a LINE L1 -62 6059 6012 626 195 51 0 chr20 38584004 38584122 -33569760 + MER5A DNA MER1_type 1 124 -65 230 269 0 0 chr20 38584211 38584263 -33569619 + L2 LINE L2 3221 3272 0 1460 124 0 0 chr20 38584933 38585135 -33568747 + AluSg/x SINE Alu 97 298 -14 2034 102 7 10 chr20 38585638 38585932 -33567950 + AluSx SINE Alu 1 293 -19 403 297 98 51 chr20 38585937 38586173 -33567709 - MIR SINE MIR -8 254 8 309 302 205 31 chr20 38586180 38586468 -33567414 + L2 LINE L2 2935 3272 0 1814 171 0 3 chr20 38586484 38586789 -33567093 + AluJo SINE Alu 1 304 -8 1247 111 40 58 chr20 38586848 38587073 -33566809 + AluJo SINE Alu 72 292 -20 222 289 83 41 chr20 38587489 38587610 -33566272 - MIR SINE MIR -109 153 28 1205 208 95 3 chr20 38587642 38587969 -33565913 + Charlie4a DNA MER1_type 30 386 -122 2191 112 10 0 chr20 38587969 38588272 -33565610 - AluSp SINE Alu -7 306 1 1171 187 0 0 chr20 38588345 38588548 -33565334 - AluJo SINE Alu -9 303 101 2011 122 13 3 chr20 38589160 38589463 -33564419 + AluSx SINE Alu 1 306 -6 1496 247 46 2 chr20 38589701 38590114 -33563768 + L1ME1 LINE L1 5713 6143 -23 681 308 136 19 chr20 38590242 38590758 -33563124 + L2 LINE L2 2735 3309 -4 2456 73 0 0 chr20 38591688 38591988 -33561894 + AluSx SINE Alu 1 300 -12 313 178 137 0 chr20 38592243 38592316 -33561566 - MIR SINE MIR -132 130 48 413 270 119 38 chr20 38592370 38592555 -33561327 - MIR SINE MIR 0 262 63 369 0 0 0 chr20 38592616 38592657 -33561225 + (TG)n Simple_repeat Simple_repeat 1 41 0 441 281 82 7 chr20 38593054 38593189 -33560693 + MIR3 SINE MIR 35 179 -29 437 247 117 31 chr20 38594114 38594276 -33559606 - MIR SINE MIR -77 185 10 287 319 111 28 chr20 38594604 38594820 -33559062 - MIR SINE MIR -25 237 4 322 206 0 14 chr20 38595084 38595157 -33558725 - L2 LINE L2 -1 3312 3241 249 159 0 0 chr20 38595753 38595797 -33558085 + (TG)n Simple_repeat Simple_repeat 2 45 0 317 213 27 13 chr20 38596647 38596722 -33557160 + L2 LINE L2 3197 3272 0 252 231 13 51 chr20 38597099 38597177 -33556705 + MIR3 SINE MIR 116 190 -18 360 0 0 0 chr20 38597225 38597265 -33556617 + (CA)n Simple_repeat Simple_repeat 2 41 0 252 0 0 0 chr20 38597307 38597335 -33556547 + (CA)n Simple_repeat Simple_repeat 2 29 0 540 0 0 0 chr20 38597377 38597437 -33556445 + (CA)n Simple_repeat Simple_repeat 2 61 0 432 252 68 97 chr20 38597584 38597704 -33556178 - MIR SINE MIR 0 262 140 2213 93 3 3 chr20 38597704 38598004 -33555878 - AluSq SINE Alu -13 300 1 432 252 68 97 chr20 38598004 38598141 -33555741 - MIR SINE MIR -122 140 14 285 237 0 26 chr20 38598438 38598514 -33555368 - L3 LINE CR1 -101 1476 1403 248 281 44 26 chr20 38598974 38599088 -33554794 - MIR3 SINE MIR -81 127 12 518 299 86 21 chr20 38599536 38599723 -33554159 - MIR SINE MIR -10 252 54 211 216 0 0 chr20 38600245 38600282 -33553600 - MIR SINE MIR -58 150 114 30 93 0 0 chr20 38601736 38601822 -33552060 + GC_rich Low_complexity Low_complexity 1 86 0 267 217 22 65 chr20 38602489 38602673 -33551209 + (CCCCG)n Simple_repeat Simple_repeat 5 180 0 2506 65 0 0 chr20 38603317 38603627 -33550255 + AluSg SINE Alu 1 310 0 212 281 6 29 chr20 38604018 38604189 -33549693 + CT-rich Low_complexity Low_complexity 1 167 0 304 202 71 99 chr20 38605356 38605400 -33548482 - MIR SINE MIR -60 148 104 1781 182 148 81 chr20 38605400 38605956 -33547926 + MLT1G1 LTR MaLR 1 593 -2 304 202 71 99 chr20 38605956 38606037 -33547845 - MIR SINE MIR -104 104 26 213 204 23 0 chr20 38606383 38606427 -33547455 - L2 LINE L2 -246 3067 3023 2221 113 0 3 chr20 38606431 38606740 -33547142 - AluSc SINE Alu -1 308 1 2394 63 23 3 chr20 38606766 38607069 -33546813 - AluY SINE Alu -2 309 1 1916 107 48 14 chr20 38607114 38607403 -33546479 - AluSq SINE Alu -14 299 1 1310 136 0 15 chr20 38607408 38607582 -33546300 - AluSg/x SINE Alu -5 305 133 2159 127 0 0 chr20 38607582 38607881 -33546001 - AluSx SINE Alu -13 299 1 1310 136 0 15 chr20 38607881 38607904 -33545978 - AluSg/x SINE Alu -177 133 111 295 261 77 56 chr20 38608048 38608243 -33545639 - L1ME4a LINE L1 -131 5990 5792 2377 74 0 3 chr20 38608243 38608553 -33545329 + AluY SINE Alu 1 309 -2 2061 98 4 7 chr20 38608560 38608837 -33545045 + AluSp SINE Alu 1 276 -37 198 0 0 0 chr20 38608842 38608864 -33545018 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1327 161 18 5 chr20 38609012 38609236 -33544646 + 7SLRNA srpRNA srpRNA 1 227 -93 1941 135 7 10 chr20 38609236 38609539 -33544343 + AluSx SINE Alu 1 302 -10 1625 155 29 41 chr20 38609541 38609857 -33544025 + AluJo SINE Alu 1 312 0 2040 147 0 10 chr20 38609939 38610253 -33543629 - AluSx SINE Alu -1 311 1 2109 117 0 29 chr20 38610253 38610560 -33543322 - AluSx SINE Alu -14 298 1 198 299 250 0 chr20 38610961 38611105 -33542777 + L3 LINE CR1 1394 1573 -4 1871 164 0 10 chr20 38611364 38611669 -33542213 - AluJb SINE Alu -10 302 1 221 286 18 0 chr20 38612187 38612243 -33541639 + L3 LINE CR1 1433 1489 -88 738 226 72 15 chr20 38612383 38612578 -33541304 - MIR SINE MIR -54 208 3 472 282 134 10 chr20 38612732 38613023 -33540859 + L1ME4a LINE L1 5577 5903 -218 2179 116 0 0 chr20 38613027 38613329 -33540553 + AluSx SINE Alu 1 302 -10 238 228 105 0 chr20 38613391 38613505 -33540377 + L1ME4a LINE L1 5996 6121 0 1489 104 136 16 chr20 38613512 38613784 -33540098 + AluSg1 SINE Alu 1 302 0 1628 86 0 0 chr20 38613865 38614074 -33539808 + AluY SINE Alu 96 304 -7 1957 141 10 0 chr20 38614219 38614517 -33539365 - AluJb SINE Alu -11 301 1 338 331 17 36 chr20 38614592 38614757 -33539125 - MIR3 SINE MIR -8 200 38 608 195 6 0 chr20 38615522 38615696 -33538186 + (CA)n Simple_repeat Simple_repeat 1 175 0 2095 127 16 0 chr20 38616017 38616324 -33537558 + AluSx SINE Alu 1 312 0 209 189 0 0 chr20 38616839 38616876 -33537006 + GA-rich Low_complexity Low_complexity 2 38 0 207 326 51 10 chr20 38617047 38617145 -33536737 + MIR SINE MIR 41 142 -66 2105 132 0 0 chr20 38617212 38617515 -33536367 + AluSx SINE Alu 1 303 -9 578 242 37 31 chr20 38617640 38617801 -33536081 + MIR SINE MIR 14 175 -87 429 247 68 48 chr20 38618274 38618420 -33535462 - L2 LINE L2 0 3313 3165 1568 118 12 144 chr20 38618473 38618812 -33535070 + AluJo SINE Alu 2 295 -17 358 275 28 84 chr20 38618812 38618954 -33534928 + L1ME4a LINE L1 5941 6074 -47 366 23 0 0 chr20 38618972 38619015 -33534867 + (TA)n Simple_repeat Simple_repeat 2 44 0 2135 116 0 7 chr20 38619016 38619309 -33534573 - AluSx SINE Alu -21 291 1 199 250 78 0 chr20 38619479 38619543 -33534339 + MIR3 SINE MIR 115 183 -25 1893 157 10 3 chr20 38620013 38620312 -33533570 + AluJb SINE Alu 1 301 -11 659 308 57 36 chr20 38620481 38620868 -33533014 - L2 LINE L2 -2143 1171 777 1173 174 116 58 chr20 38621174 38621450 -33532432 + AluJo SINE Alu 1 292 -10 241 281 62 52 chr20 38621541 38621637 -33532245 - L3 LINE CR1 -1070 507 411 2483 258 87 39 chr20 38621807 38622049 -33531833 + L2 LINE L2 2049 2278 -1035 1938 153 3 0 chr20 38622049 38622349 -33531533 - AluJb SINE Alu -11 301 1 2483 258 87 39 chr20 38622349 38622725 -33531157 + L2 LINE L2 2278 2635 -678 2053 121 0 0 chr20 38622725 38623030 -33530852 + AluSx SINE Alu 1 305 0 2483 258 87 39 chr20 38623030 38623388 -33530494 + L2 LINE L2 2635 2975 -338 1661 162 3 21 chr20 38623388 38623678 -33530204 + AluJo SINE Alu 1 285 -27 698 91 0 40 chr20 38623576 38623678 -33530204 + AluJo/FRAM SINE Alu 188 320 0 316 0 0 0 chr20 38623678 38623713 -33530169 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 2483 258 87 39 chr20 38623713 38623786 -33530096 + L2 LINE L2 2975 3043 -270 2459 66 7 0 chr20 38623786 38624090 -33529792 - AluSq SINE Alu -7 306 1 2483 258 87 39 chr20 38624090 38624248 -33529634 + L2 LINE L2 3043 3313 0 494 299 177 4 chr20 38624754 38625008 -33528874 - L2 LINE L2 -186 3127 2830 1322 171 6 108 chr20 38625042 38625227 -33528655 - AluJo SINE Alu -2 300 162 2077 98 7 3 chr20 38625227 38625524 -33528358 + AluSc SINE Alu 1 298 -11 1322 171 6 108 chr20 38625524 38625671 -33528211 - AluJo SINE Alu -140 162 2 278 86 0 0 chr20 38625679 38625714 -33528168 - Alu SINE Alu -259 40 6 504 254 76 16 chr20 38625733 38625918 -33527964 - L2 LINE L2 -519 2795 2600 186 315 112 0 chr20 38627014 38627103 -33526779 + MIR3 SINE MIR 87 185 -23 1186 116 0 0 chr20 38627150 38627322 -33526560 - AluSg/x SINE Alu -17 293 122 2378 72 3 0 chr20 38627338 38627642 -33526240 + AluY SINE Alu 1 305 -6 1957 127 0 3 chr20 38627652 38627977 -33525905 + AluSx SINE Alu 1 324 0 235 250 171 7 chr20 38628693 38628823 -33525059 - L1ME4a LINE L1 -10 6111 5955 189 0 0 0 chr20 38628823 38628844 -33525038 + (TG)n Simple_repeat Simple_repeat 2 22 0 1997 93 6 45 chr20 38629302 38629690 -33524192 - AluSq SINE Alu 0 376 1 1181 114 0 0 chr20 38630608 38630774 -33523108 - AluSg/x SINE Alu -19 291 126 799 164 0 15 chr20 38631423 38631557 -33522325 + FLAM_A SINE Alu 1 132 -1 731 216 99 39 chr20 38632700 38633031 -33520851 + LTR33A LTR ERVL 1 386 -137 1616 108 18 0 chr20 38633159 38633382 -33520500 - AluSg/x SINE Alu -21 291 65 2143 110 0 0 chr20 38633398 38633688 -33520194 + AluSx SINE Alu 1 290 -22 922 206 0 0 chr20 38633785 38633950 -33519932 - FRAM SINE Alu -11 165 1 223 196 39 20 chr20 38634000 38634051 -33519831 + L2 LINE L2 2698 2749 -565 256 293 40 98 chr20 38634093 38634318 -33519564 + L2 LINE L2 2870 3081 -191 25 0 0 0 chr20 38634398 38634423 -33519459 + AT_rich Low_complexity Low_complexity 1 25 0 190 303 124 22 chr20 38634434 38634523 -33519359 + L2 LINE L2 3176 3273 -40 1715 120 51 4 chr20 38634703 38634978 -33518904 - MER2 DNA MER2_type 0 345 58 354 49 0 0 chr20 38634978 38635043 -33518839 - AluY SINE Alu 0 305 241 1155 50 0 7 chr20 38635045 38635186 -33518696 - AluY SINE Alu -171 140 1 351 176 0 108 chr20 38635187 38635261 -33518621 - MER2 DNA MER2_type -278 67 2 2066 104 3 3 chr20 38635468 38635755 -33518127 + AluSg SINE Alu 1 287 -23 23 0 0 0 chr20 38635761 38635784 -33518098 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr20 38636161 38636182 -33517700 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 1625 179 21 0 chr20 38636956 38637241 -33516641 - AluJb SINE Alu -21 291 1 2319 94 3 0 chr20 38637545 38637853 -33516029 + AluSg SINE Alu 1 309 -1 1430 146 0 64 chr20 38638097 38638364 -33515518 + AluSx SINE Alu 56 305 -7 312 313 134 6 chr20 38638597 38638732 -33515150 - L2 LINE L2 -1355 1959 1794 2137 100 0 0 chr20 38638732 38639023 -33514859 + AluSg SINE Alu 6 296 -14 312 313 134 6 chr20 38639023 38639066 -33514816 - L2 LINE L2 -1520 1794 1758 1368 85 64 110 chr20 38639072 38639164 -33514718 + L1MA5A LINE L1 6026 6121 -176 2154 112 0 0 chr20 38639164 38639459 -33514423 - AluSx SINE Alu -17 295 1 1368 85 64 110 chr20 38639459 38639484 -33514398 + L1MA5A LINE L1 6121 6146 -151 2004 103 7 23 chr20 38639484 38639785 -33514097 - AluSc SINE Alu -13 296 1 1368 85 64 110 chr20 38639785 38639948 -33513934 + L1MA5A LINE L1 6146 6294 -3 1234 135 0 0 chr20 38640089 38640274 -33513608 - AluJb SINE Alu -23 289 105 448 169 0 0 chr20 38640275 38640352 -33513530 + AluJ/FRAM SINE Alu 219 295 -17 625 266 0 12 chr20 38640353 38640367 -33513515 - MER3 DNA MER1_type 6 168 155 1867 172 0 0 chr20 38640367 38640664 -33513218 + AluJo SINE Alu 1 297 -15 625 266 0 12 chr20 38640664 38640818 -33513064 - MER3 DNA MER1_type -7 155 2 568 314 91 66 chr20 38640820 38641106 -33512776 - L2 LINE L2 -1750 1564 1287 1994 104 3 7 chr20 38641106 38641393 -33512489 - AluSx SINE Alu -24 288 3 568 314 91 66 chr20 38641393 38641657 -33512225 - L2 LINE L2 -2027 1287 1031 2090 119 0 3 chr20 38641657 38641952 -33511930 - AluSx SINE Alu -18 294 1 568 314 91 66 chr20 38641952 38642177 -33511705 - L2 LINE L2 -2283 1031 768 2022 88 0 7 chr20 38642179 38642451 -33511431 - AluSc SINE Alu -38 271 2 2104 106 10 6 chr20 38642453 38642764 -33511118 - AluSx SINE Alu 0 312 1 27 73 0 0 chr20 38642797 38642852 -33511030 + AT_rich Low_complexity Low_complexity 1 55 0 287 100 0 0 chr20 38642961 38643011 -33510871 + L1ME4a LINE L1 6061 6110 -11 2157 86 0 0 chr20 38643350 38643654 -33510228 + AluSg SINE Alu 1 304 0 486 255 172 21 chr20 38644010 38644202 -33509680 + MIR SINE MIR 15 235 -27 2050 120 0 7 chr20 38644602 38644901 -33508981 + AluSq SINE Alu 1 297 -16 319 241 93 9 chr20 38644911 38645019 -33508863 + L1MC5 LINE L1 7754 7870 -91 1985 134 7 0 chr20 38645069 38645374 -33508508 + AluSx SINE Alu 1 307 -5 451 217 108 16 chr20 38645379 38645508 -33508374 + L1MC5 LINE L1 7726 7866 -95 2085 129 0 0 chr20 38645710 38646005 -33507877 - AluSx SINE Alu -17 295 1 1424 147 9 120 chr20 38646005 38646338 -33507544 - AluJo SINE Alu -5 297 2 364 238 0 0 chr20 38646383 38646446 -33507436 - FRAM/FAM SINE Alu -106 60 1 1061 95 14 0 chr20 38646453 38646600 -33507282 - AluSg1 SINE Alu -10 300 152 681 79 11 0 chr20 38646600 38646689 -33507193 - AluSg1 SINE Alu -219 90 1 1910 140 3 10 chr20 38646775 38647089 -33506793 - AluSx SINE Alu 0 312 1 1651 170 20 3 chr20 38647145 38647451 -33506431 - AluJb SINE Alu -1 311 1 660 207 126 11 chr20 38647486 38647660 -33506222 + MER5C DNA MER1_type 127 320 -4 242 252 126 19 chr20 38647805 38647851 -33506031 + LTR67 LTR ERVL 441 481 -76 2134 103 0 0 chr20 38647851 38648175 -33505707 - AluSx SINE Alu 0 312 1 242 252 126 19 chr20 38648175 38648231 -33505651 + LTR67 LTR ERVL 481 554 -3 2241 87 0 31 chr20 38648300 38648621 -33505261 + AluSq SINE Alu 1 311 -2 1063 157 0 108 chr20 38648795 38648858 -33505024 + AluJb SINE Alu 83 151 -161 2358 54 10 0 chr20 38648858 38649153 -33504729 + AluY SINE Alu 1 298 -13 1063 157 0 108 chr20 38649153 38649338 -33504544 + AluJb SINE Alu 151 304 -8 2024 134 0 0 chr20 38649361 38649659 -33504223 + AluSx SINE Alu 1 298 -14 418 323 124 0 chr20 38649661 38649847 -33504035 - MIR SINE MIR -5 257 49 720 179 8 0 chr20 38649886 38650003 -33503879 + FLAM_C SINE Alu 1 118 -15 30 45 0 0 chr20 38650003 38650047 -33503835 + AT_rich Low_complexity Low_complexity 1 44 0 475 250 161 6 chr20 38650421 38650589 -33503293 - MIR SINE MIR -24 238 45 189 74 0 0 chr20 38650603 38650630 -33503252 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1313 178 0 21 chr20 38651778 38652020 -33501862 + AluJb SINE Alu 64 300 -12 812 176 10 107 chr20 38652020 38652052 -33501830 + Tigger2 DNA MER2_type 2534 2568 -150 1487 199 27 7 chr20 38652052 38652344 -33501538 + AluJo SINE Alu 1 298 -14 812 176 10 107 chr20 38652344 38652445 -33501437 + Tigger2 DNA MER2_type 2568 2643 -75 1886 163 0 0 chr20 38652445 38652752 -33501130 + AluSx SINE Alu 1 307 -5 812 176 10 107 chr20 38652752 38652822 -33501060 + Tigger2 DNA MER2_type 2643 2718 0 2349 58 0 7 chr20 38652868 38653162 -33500720 + AluY SINE Alu 1 292 -19 664 262 174 0 chr20 38653168 38653340 -33500542 + MIR SINE MIR 29 230 -32 860 165 0 0 chr20 38653341 38653468 -33500414 + FLAM_A SINE Alu 1 127 -6 24 0 0 0 chr20 38653533 38653557 -33500325 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr20 38653888 38653909 -33499973 + AT_rich Low_complexity Low_complexity 1 21 0 1982 134 3 0 chr20 38654362 38654668 -33499214 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr20 38654901 38654923 -33498959 + AT_rich Low_complexity Low_complexity 1 22 0 591 114 155 23 chr20 38655010 38655205 -33498677 - AluJb SINE Alu -18 294 37 25 31 0 0 chr20 38655329 38655361 -33498521 + AT_rich Low_complexity Low_complexity 1 32 0 2105 125 0 10 chr20 38655393 38655706 -33498176 + AluSx SINE Alu 3 312 0 1869 159 0 0 chr20 38655729 38656019 -33497863 + AluJb SINE Alu 2 291 -21 1453 189 0 8 chr20 38657003 38657267 -33496615 - AluJo SINE Alu -30 282 21 1790 128 27 20 chr20 38657355 38657653 -33496229 + AluSx SINE Alu 1 300 -12 1718 170 6 13 chr20 38657671 38657982 -33495900 + AluJo SINE Alu 1 309 -3 2180 97 0 3 chr20 38657984 38658284 -33495598 + AluSc SINE Alu 1 299 -10 592 253 18 18 chr20 38658293 38658459 -33495423 + L1MC4a LINE L1 7210 7375 -433 1167 133 0 0 chr20 38658561 38658726 -33495156 - AluSq SINE Alu -145 168 4 1663 172 80 71 chr20 38658734 38659143 -33494739 + L1MC4 LINE L1 7445 7849 -193 1308 196 36 11 chr20 38659143 38659418 -33494464 - AluJo SINE Alu -30 282 1 1663 172 80 71 chr20 38659418 38659429 -33494453 + L1MC4 LINE L1 7849 7858 -184 1534 147 135 4 chr20 38659429 38659688 -33494194 - AluJb SINE Alu -9 293 1 1663 172 80 71 chr20 38659688 38659742 -33494140 + L1MC4 LINE L1 7858 7924 -118 2138 95 7 3 chr20 38659743 38660038 -33493844 - AluY SINE Alu -15 296 1 537 224 0 0 chr20 38660067 38660174 -33493708 + AluSg/x SINE Alu 187 293 -17 207 0 0 0 chr20 38660177 38660200 -33493682 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 282 173 0 19 chr20 38660357 38660409 -33493473 + AluJo/FLAM SINE Alu 78 128 -174 721 206 7 7 chr20 38660409 38660545 -33493337 + FLAM_A SINE Alu 2 137 -5 418 101 58 0 chr20 38660566 38660635 -33493247 - LTR23 LTR ERV1 0 437 365 1500 181 4 11 chr20 38660707 38660988 -33492894 + AluJo SINE Alu 1 279 -33 248 197 0 30 chr20 38660989 38661055 -33492827 + G-rich Low_complexity Low_complexity 4 67 0 * 349 183 15 51 chr20 38661041 38661178 -33492704 + GA-rich Low_complexity Low_complexity 1 132 0 894 171 135 60 chr20 38661193 38661474 -33492408 - LTR56 LTR ERV1 -135 310 9 2239 102 3 0 chr20 38661616 38661920 -33491962 + AluSg SINE Alu 1 305 -5 660 234 188 13 chr20 38662005 38662244 -33491638 + L1ME LINE L1 13 293 -5777 629 230 117 30 chr20 38662245 38662592 -33491290 + L1ME LINE L1 5078 5461 -637 1031 176 0 0 chr20 38662820 38662990 -33490892 - FAM SINE Alu -10 175 6 2113 94 3 13 chr20 38663109 38663407 -33490475 + AluY SINE Alu 1 295 -16 2276 87 0 0 chr20 38663409 38663709 -33490173 + AluSg SINE Alu 1 300 -10 279 95 24 0 chr20 38663709 38663751 -33490131 + Charlie7 DNA MER1_type 51 93 -2519 2200 113 0 0 chr20 38663779 38664079 -33489803 + AluSx SINE Alu 1 300 -12 1552 144 90 11 chr20 38664457 38664734 -33489148 + AluSx SINE Alu 1 299 -13 812 135 8 8 chr20 38664948 38665138 -33488744 + FLAM_C SINE Alu 1 190 0 2194 102 3 0 chr20 38665218 38665523 -33488359 + AluSx SINE Alu 1 306 -6 1643 202 12 86 chr20 38665999 38666358 -33487524 + L1MD2 LINE L1 5336 5579 -780 1974 117 0 4 chr20 38666358 38666639 -33487243 + AluSx SINE Alu 1 280 -32 1643 202 12 86 chr20 38666639 38666990 -33486892 + L1MD2 LINE L1 5579 5954 -405 1233 103 5 73 chr20 38667002 38667206 -33486676 + AluSq SINE Alu 1 190 -123 1979 141 3 3 chr20 38667400 38667713 -33486169 - AluSq SINE Alu 0 313 1 2277 94 0 0 chr20 38668327 38668626 -33485256 - AluSx SINE Alu -13 299 1 1253 178 141 4 chr20 38668752 38669022 -33484860 + AluJo SINE Alu 3 309 -3 1464 153 60 43 chr20 38669061 38669361 -33484521 - AluJo SINE Alu -7 305 1 927 155 105 6 chr20 38669432 38669613 -33484269 - AluSc SINE Alu -9 300 102 2250 103 0 0 chr20 38669614 38669914 -33483968 + AluSx SINE Alu 1 300 -12 568 201 13 34 chr20 38670038 38670187 -33483695 + L1M4 LINE L1 5052 5197 -949 580 240 123 28 chr20 38670300 38670479 -33483403 - L2 LINE L2 -906 2408 2213 1429 156 128 49 chr20 38670479 38670862 -33483020 + MLT2B1 LTR ERVL 1 459 -61 2297 98 0 0 chr20 38670862 38671168 -33482714 + AluSx SINE Alu 2 307 -5 1630 198 0 0 chr20 38671353 38671651 -33482231 + AluJb SINE Alu 1 298 -14 2199 63 3 11 chr20 38673070 38673380 -33480502 + AluSp SINE Alu 1 308 0 2425 62 0 33 chr20 38673587 38673892 -33479990 - AluY SINE Alu -16 295 1 290 270 43 87 chr20 38673965 38674150 -33479732 - LTR16C LTR ERVL 0 491 315 978 183 94 0 chr20 38674192 38674383 -33479499 + MER3 DNA MER1_type 1 209 0 355 277 0 0 chr20 38674474 38674568 -33479314 + L2 LINE L2 3220 3313 0 2358 106 0 0 chr20 38674735 38675037 -33478845 + AluSg SINE Alu 2 303 -7 1280 81 0 6 chr20 38675037 38675197 -33478685 + AluY SINE Alu 37 195 -116 2369 85 3 0 chr20 38675503 38675796 -33478086 + AluSp SINE Alu 1 294 -19 231 103 0 0 chr20 38675888 38675927 -33477955 + (TATG)n Simple_repeat Simple_repeat 2 40 0 958 168 12 12 chr20 38675944 38676111 -33477771 - AluJo SINE Alu -29 283 117 262 250 132 0 chr20 38676174 38676250 -33477632 - MIR SINE MIR -106 156 71 1845 105 23 98 chr20 38676489 38676816 -33477066 + AluSx SINE Alu 1 304 0 1896 103 57 40 chr20 38676891 38677034 -33476848 + AluSq SINE Alu 1 140 -173 2255 61 44 14 chr20 38677034 38677328 -33476554 + AluY SINE Alu 1 303 -8 1896 103 57 40 chr20 38677328 38677485 -33476397 + AluSq SINE Alu 140 306 -7 360 0 0 0 chr20 38678201 38678241 -33475641 + (TG)n Simple_repeat Simple_repeat 2 41 0 291 28 0 0 chr20 38678296 38678332 -33475550 + (TG)n Simple_repeat Simple_repeat 2 37 0 309 26 0 0 chr20 38678367 38678405 -33475477 + (TG)n Simple_repeat Simple_repeat 2 39 0 351 0 0 0 chr20 38678442 38678481 -33475401 + (TG)n Simple_repeat Simple_repeat 1 39 0 1978 108 0 0 chr20 38678600 38678859 -33475023 + AluSc SINE Alu 50 308 -1 278 221 0 15 chr20 38678871 38678939 -33474943 - MER92A LTR ERV1 -47 365 299 2273 104 3 0 chr20 38678947 38679255 -33474627 + AluSx SINE Alu 1 309 -3 856 143 0 36 chr20 38679296 38679436 -33474446 + FLAM_C SINE Alu 1 135 -8 2464 71 0 7 chr20 38679439 38679747 -33474135 + AluSc SINE Alu 1 306 -3 930 220 57 86 chr20 38679747 38680061 -33473821 - MER92A LTR ERV1 -107 305 1 277 235 10 31 chr20 38682602 38682700 -33471182 - MIR SINE MIR -20 242 147 30 0 0 0 chr20 38682700 38682730 -33471152 + AT_rich Low_complexity Low_complexity 1 30 0 267 233 0 0 chr20 38682758 38682818 -33471064 - MIR SINE MIR -45 217 158 883 318 9 122 chr20 38682838 38683175 -33470707 - AluSx SINE Alu -3 299 1 2230 130 0 0 chr20 38683489 38683790 -33470092 - AluSx SINE Alu -11 301 1 9840 19 10 223 chr20 38683911 38685661 -33468221 + SVA Other Other 9 1386 0 1544 187 34 10 chr20 38686133 38686427 -33467455 - AluJo SINE Alu -4 308 8 1585 136 136 4 chr20 38686572 38686836 -33467046 + AluJb SINE Alu 1 299 -13 2459 97 0 0 chr20 38686836 38687147 -33466735 + AluSq SINE Alu 1 311 -2 2401 85 0 0 chr20 38687478 38687783 -33466099 - AluY SINE Alu -4 307 3 2101 112 11 0 chr20 38687788 38688075 -33465807 - AluSg SINE Alu -19 291 2 2456 98 0 0 chr20 38688077 38688383 -33465499 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 38688569 38688592 -33465290 + AT_rich Low_complexity Low_complexity 1 23 0 864 229 170 12 chr20 38688700 38688973 -33464909 + AluSg SINE Alu 1 300 0 311 129 43 0 chr20 38689014 38689084 -33464798 + GA-rich Low_complexity Low_complexity 3 75 0 1887 170 3 3 chr20 38689146 38689440 -33464442 + AluJb SINE Alu 1 294 -18 288 0 0 0 chr20 38689676 38689708 -33464174 + (TG)n Simple_repeat Simple_repeat 1 32 0 2152 99 0 21 chr20 38689708 38689990 -33463892 - AluSc SINE Alu -33 276 1 1940 136 18 0 chr20 38690725 38691042 -33462840 + AluSx SINE Alu 1 322 0 982 193 0 0 chr20 38691096 38691262 -33462620 - AluJb SINE Alu -9 303 138 28 71 0 0 chr20 38692082 38692138 -33461744 + AT_rich Low_complexity Low_complexity 1 56 0 2354 100 0 0 chr20 38692144 38692444 -33461438 - AluSx SINE Alu -12 300 1 2296 92 7 10 chr20 38693493 38693796 -33460086 - AluSc SINE Alu -7 302 1 1910 173 0 0 chr20 38694387 38694682 -33459200 - AluJb SINE Alu -17 295 1 2115 141 0 3 chr20 38695174 38695478 -33458404 - AluSx SINE Alu -9 303 1 2135 111 3 23 chr20 38695833 38696140 -33457742 - AluSx SINE Alu -11 301 1 957 255 136 60 chr20 38697190 38697295 -33456587 + MLT1J LTR MaLR 17 113 -398 1915 168 0 0 chr20 38697295 38697593 -33456289 + AluJb SINE Alu 3 300 -12 957 255 136 60 chr20 38697593 38697802 -33456080 + MLT1J LTR MaLR 113 373 -138 2322 88 3 3 chr20 38697802 38698097 -33455785 - AluY SINE Alu -16 295 1 957 255 136 60 chr20 38698097 38698200 -33455682 + MLT1J LTR MaLR 373 467 -44 2390 92 0 0 chr20 38698480 38698773 -33455109 + AluSg SINE Alu 2 294 -16 2179 119 6 13 chr20 38698779 38699090 -33454792 + AluSc SINE Alu 1 309 0 1711 149 30 17 chr20 38699120 38699415 -33454467 + AluJo SINE Alu 5 303 -9 652 193 17 0 chr20 38699443 38699562 -33454320 + FAM SINE Alu 20 140 -45 1669 185 3 13 chr20 38699802 38700110 -33453772 - AluJo SINE Alu -7 305 1 2046 138 7 0 chr20 38700138 38700435 -33453447 + AluSx SINE Alu 1 299 -13 790 231 6 0 chr20 38700446 38700606 -33453276 + FRAM SINE Alu 8 168 -8 6696 182 39 55 chr20 38700903 38701278 -33452604 + L1MB3 LINE L1 3634 4013 -2170 1295 213 4 4 chr20 38701278 38701517 -33452365 + MER8 DNA MER2_type 1 239 0 6696 182 39 55 chr20 38701517 38702493 -33451389 + L1MB3 LINE L1 4013 5003 -1180 1845 139 3 62 chr20 38702493 38702628 -33451254 + AluJb SINE Alu 1 142 -170 2351 113 0 0 chr20 38702628 38702937 -33450945 + AluSx SINE Alu 1 309 -3 1845 139 3 62 chr20 38702937 38703110 -33450772 + AluJb SINE Alu 142 291 -21 6696 182 39 55 chr20 38703110 38703797 -33450085 + L1MB3 LINE L1 5003 5630 -553 1722 181 0 30 chr20 38703797 38704101 -33449781 - AluJb SINE Alu -15 297 3 6696 182 39 55 chr20 38704101 38704629 -33449253 + L1MB3 LINE L1 5630 6165 -18 1723 183 3 7 chr20 38705071 38705241 -33448641 - AluJb SINE Alu -10 302 132 2306 84 14 7 chr20 38705241 38705538 -33448344 - AluY SINE Alu -12 299 1 1723 183 3 7 chr20 38705538 38705668 -33448214 - AluJb SINE Alu -180 132 3 2183 110 7 17 chr20 38705670 38705971 -33447911 - AluSx SINE Alu -13 299 2 1929 161 16 3 chr20 38705986 38706291 -33447591 - AluJo SINE Alu -2 310 2 1267 179 21 4 chr20 38706532 38706766 -33447116 + AluJb SINE Alu 73 310 -2 32 0 0 0 chr20 38706798 38706830 -33447052 + AT_rich Low_complexity Low_complexity 1 32 0 1754 146 30 27 chr20 38706849 38707177 -33446705 + L1MC1 LINE L1 6005 6333 0 24 0 0 0 chr20 38707565 38707589 -33446293 + AT_rich Low_complexity Low_complexity 1 24 0 223 282 273 0 chr20 38707622 38707732 -33446150 - L2 LINE L2 0 3272 3133 1973 124 42 0 chr20 38708338 38708621 -33445261 - AluSx SINE Alu -17 295 1 2668 58 0 0 chr20 38708672 38708980 -33444902 - AluY SINE Alu -3 308 1 1249 171 69 97 chr20 38709366 38709736 -33444146 + Tigger6 DNA MER2_type 1173 1552 -45 1996 115 3 40 chr20 38709736 38710040 -33443842 - AluSg SINE Alu -17 293 1 2262 119 3 0 chr20 38710044 38710347 -33443535 - AluSx SINE Alu -8 304 1 2229 111 0 0 chr20 38710357 38710654 -33443228 - AluSg1 SINE Alu -12 297 1 2445 89 0 0 chr20 38710654 38710958 -33442924 - AluSx SINE Alu -8 304 1 1249 171 69 97 chr20 38710958 38711004 -33442878 + Tigger6 DNA MER2_type 1562 1594 -3 2867 77 3 3 chr20 38711406 38711770 -33442112 + THE1B LTR MaLR 1 364 0 501 201 67 75 chr20 38711791 38711925 -33441957 - FLAM_A SINE Alu 0 133 1 29 47 0 0 chr20 38711971 38712014 -33441868 + AT_rich Low_complexity Low_complexity 1 43 0 2187 133 0 3 chr20 38712408 38712708 -33441174 - AluSx SINE Alu -13 299 1 382 162 67 38 chr20 38712865 38712970 -33440912 - MIR SINE MIR -83 179 72 2175 123 0 10 chr20 38713363 38713673 -33440209 - AluSx SINE Alu 0 312 6 4865 147 29 76 chr20 38713763 38713882 -33440000 + L1MB8 LINE L1 5083 5206 -972 330 95 0 0 chr20 38713882 38713924 -33439958 + AluY SINE Alu 1 42 -259 1799 84 0 4 chr20 38713925 38714151 -33439731 + AluY SINE Alu 80 304 -7 4865 147 29 76 chr20 38714151 38714684 -33439198 + L1MB8 LINE L1 5206 5762 -416 2004 118 14 27 chr20 38714684 38714981 -33438901 + AluJb SINE Alu 9 301 -11 4865 147 29 76 chr20 38714981 38715083 -33438799 + L1MB8 LINE L1 5762 5867 -311 1079 186 26 150 chr20 38715083 38715255 -33438627 + AluJo SINE Alu 2 113 -189 2089 103 3 41 chr20 38715255 38715575 -33438307 + AluSg1 SINE Alu 1 308 -1 1079 186 26 150 chr20 38715575 38715741 -33438141 + AluJo SINE Alu 113 298 -4 4865 147 29 76 chr20 38715741 38716087 -33437795 + L1MB8 LINE L1 5867 6169 -9 22 0 0 0 chr20 38716089 38716111 -33437771 + AT_rich Low_complexity Low_complexity 1 22 0 2374 88 3 3 chr20 38716387 38716694 -33437188 - AluSq SINE Alu -6 307 1 2219 99 0 0 chr20 38717127 38717461 -33436421 - AluY SINE Alu 0 334 1 834 125 8 23 chr20 38717527 38717655 -33436227 + FLAM_C SINE Alu 1 126 -17 856 208 0 0 chr20 38718459 38718608 -33435274 - FRAM SINE Alu -17 159 11 2104 132 0 16 chr20 38718665 38718968 -33434914 - AluSq SINE Alu -15 298 1 2132 142 0 0 chr20 38719753 38720064 -33433818 + AluSx SINE Alu 1 311 -1 573 308 135 58 chr20 38720237 38720838 -33433044 + HAL1 LINE L1 262 908 -1599 724 182 0 23 chr20 38720842 38720974 -33432908 + FLAM_A SINE Alu 5 133 0 2253 115 3 3 chr20 38720975 38721287 -33432595 + AluSx SINE Alu 1 312 0 28 61 0 0 chr20 38721774 38721823 -33432059 + AT_rich Low_complexity Low_complexity 1 49 0 2359 103 3 0 chr20 38721836 38722148 -33431734 + AluSp SINE Alu 1 313 0 1288 237 87 45 chr20 38722214 38722317 -33431565 + HAL1 LINE L1 1036 1133 -1374 2556 68 0 7 chr20 38722317 38722627 -33431255 + AluY SINE Alu 1 308 -3 1288 237 87 45 chr20 38722627 38723055 -33430827 + HAL1 LINE L1 1133 1589 -918 720 127 6 162 chr20 38723055 38723228 -33430654 - FAM SINE Alu 0 49 1 1954 133 17 10 chr20 38723235 38723536 -33430346 - AluSq SINE Alu -10 303 1 265 222 86 0 chr20 38723543 38723624 -33430258 + HAL1 LINE L1 1576 1663 -844 * 272 185 0 0 chr20 38723621 38723675 -33430207 + L1MDa LINE L1 2243 2296 -4244 1974 192 59 42 chr20 38723719 38724073 -33429809 + L1MDa LINE L1 2419 2766 -3774 2323 109 0 10 chr20 38724073 38724386 -33429496 - AluSg SINE Alu 0 310 1 2084 104 0 57 chr20 38724389 38724572 -33429310 - AluSx SINE Alu -14 298 139 2143 133 0 0 chr20 38724572 38724865 -33429017 - AluSx SINE Alu -19 293 1 2084 104 0 57 chr20 38724865 38724997 -33428885 - AluSx SINE Alu -173 139 1 1974 192 59 42 chr20 38724997 38725282 -33428600 + L1MDa LINE L1 2767 3077 -3463 2903 174 84 7 chr20 38725282 38725844 -33428038 + MER6A DNA MER2_type 1 605 0 1974 192 59 42 chr20 38725844 38725952 -33427930 + L1MDa LINE L1 3077 3182 -3358 231 240 144 58 chr20 38725976 38726080 -33427802 + L1MD2 LINE L1 6010 6122 -237 270 0 0 0 chr20 38726084 38726114 -33427768 + (CA)n Simple_repeat Simple_repeat 2 31 0 627 208 56 7 chr20 38726114 38726258 -33427624 + L1MD1 LINE L1 6081 6231 -11 2208 107 0 13 chr20 38726258 38726567 -33427315 + AluSg1 SINE Alu 1 305 -4 531 321 41 21 chr20 38726583 38726603 -33427279 + HAL1 LINE L1 1656 1674 -833 2265 109 0 0 chr20 38726603 38726897 -33426985 + AluSx SINE Alu 1 294 -18 531 321 41 21 chr20 38726897 38727119 -33426763 + HAL1 LINE L1 1674 1903 -604 198 0 0 0 chr20 38727365 38727387 -33426495 + (A)n Simple_repeat Simple_repeat 1 22 0 2027 116 45 0 chr20 38727822 38728114 -33425768 + AluSq SINE Alu 1 305 -8 2378 110 0 0 chr20 38728398 38728708 -33425174 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 38728813 38728834 -33425048 + AT_rich Low_complexity Low_complexity 1 21 0 3387 170 30 50 chr20 38728859 38729048 -33424834 - L1MB1 LINE L1 -206 5962 5771 543 69 0 0 chr20 38729048 38729120 -33424762 + (CCTA)n Simple_repeat Simple_repeat 4 75 0 3387 170 30 50 chr20 38729120 38729762 -33424120 - L1MB1 LINE L1 -397 5771 5150 927 136 8 0 chr20 38729764 38729896 -33423986 + AluSq/x SINE Alu 3 135 -178 2099 101 36 13 chr20 38729896 38730202 -33423680 + AluSp SINE Alu 1 313 0 2245 112 3 0 chr20 38730303 38730599 -33423283 + AluSc SINE Alu 13 309 0 816 191 0 0 chr20 38730619 38730760 -33423122 - FLAM_C SINE Alu -2 141 1 379 135 34 56 chr20 38730762 38730815 -33423067 - L1MB1 LINE L1 -1583 4563 4511 1564 165 114 7 chr20 38730815 38731088 -33422794 - AluJb SINE Alu -9 303 2 379 135 34 56 chr20 38731088 38731123 -33422759 - L1MB1 LINE L1 -1635 4511 4477 2427 67 3 0 chr20 38731946 38732269 -33421613 + AluSp SINE Alu 1 324 0 26 0 0 0 chr20 38732384 38732410 -33421472 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr20 38732526 38732547 -33421335 + AT_rich Low_complexity Low_complexity 1 21 0 2028 130 13 7 chr20 38732558 38732858 -33421024 + AluJb SINE Alu 1 302 -10 356 234 103 19 chr20 38732861 38732968 -33420914 - FLAM_A SINE Alu -17 116 1 268 331 50 12 chr20 38733489 38733649 -33420233 - MIR SINE MIR -50 212 47 711 100 0 0 chr20 38734626 38734726 -33419156 + AluSc SINE Alu 206 305 -4 2436 35 0 85 chr20 38734728 38735046 -33418836 + AluY SINE Alu 1 291 -20 1487 155 136 8 chr20 38735138 38735396 -33418486 - AluSg SINE Alu -8 292 2 877 188 99 143 chr20 38735421 38735568 -33418314 + AluSx SINE Alu 1 153 -149 2293 107 0 7 chr20 38735568 38735866 -33418016 - AluSx SINE Alu -16 296 1 2080 149 3 3 chr20 38735868 38736177 -33417705 - AluJb SINE Alu -3 309 1 2217 113 3 10 chr20 38736181 38736492 -33417390 - AluSc SINE Alu 0 309 1 877 188 99 143 chr20 38736492 38736650 -33417232 + AluSx SINE Alu 157 300 -2 2189 96 0 58 chr20 38736667 38736980 -33416902 - AluSx SINE Alu -17 295 1 2068 154 0 3 chr20 38736982 38737287 -33416595 - AluJb SINE Alu -8 304 1 1684 141 116 11 chr20 38737691 38737968 -33415914 - AluJb SINE Alu -6 306 1 2200 118 10 3 chr20 38739541 38739846 -33414036 + AluSx SINE Alu 1 307 -5 1080 198 29 5 chr20 38740351 38740558 -33413324 + AluJb SINE Alu 89 300 -12 22 0 0 0 chr20 38740574 38740596 -33413286 + AT_rich Low_complexity Low_complexity 1 22 0 560 63 13 13 chr20 38740805 38740884 -33412998 + AluSp SINE Alu 59 137 -176 10004 31 10 182 chr20 38740887 38742548 -33411334 + SVA Other Other 13 1386 0 436 203 0 0 chr20 38742749 38742823 -33411059 - AluSg/x SINE Alu -43 266 193 2170 126 3 0 chr20 38742956 38743249 -33410633 - AluSx SINE Alu -18 294 1 2207 138 57 41 chr20 38743371 38743428 -33410454 + MSTB LTR MaLR 1 56 -370 1725 185 27 0 chr20 38743428 38743720 -33410162 + AluJb SINE Alu 1 300 -12 2207 138 57 41 chr20 38743720 38744081 -33409801 + MSTB LTR MaLR 56 426 0 1809 83 4 0 chr20 38744241 38744469 -33409413 + AluSp SINE Alu 1 229 -84 706 68 0 0 chr20 38744481 38744569 -33409313 + AluSp SINE Alu 208 295 -18 304 364 10 0 chr20 38744662 38744761 -33409121 + LTR67 LTR ERVL 119 218 -339 1120 183 0 33 chr20 38745017 38745230 -33408652 - AluJb SINE Alu -23 289 84 2126 159 0 0 chr20 38745471 38745780 -33408102 + AluJo SINE Alu 2 310 -2 664 213 0 8 chr20 38745795 38745917 -33407965 + FLAM_A SINE Alu 4 124 -9 2051 66 0 19 chr20 38745922 38746181 -33407701 + AluY SINE Alu 44 297 -14 1982 154 0 3 chr20 38746190 38746488 -33407394 + AluJo SINE Alu 6 302 -10 1104 173 133 4 chr20 38746506 38746732 -33407150 + L1MB7 LINE L1 5354 5608 -576 1070 128 0 13 chr20 38746733 38746883 -33406999 + AluSg/x SINE Alu 137 285 -22 3050 136 62 7 chr20 38746883 38747435 -33406447 + L1MB7 LINE L1 5594 6175 -9 2291 102 3 0 chr20 38747515 38747809 -33406073 - AluSx SINE Alu -17 295 1 477 220 71 14 chr20 38747810 38747951 -33405931 + L1MB2 LINE L1 5549 5697 -424 284 246 78 42 chr20 38748188 38748219 -33405663 - L1MC4a LINE L1 -1875 5933 5905 2123 210 48 24 chr20 38748219 38748756 -33405126 - MER44D DNA MER2_type 0 605 1 284 246 78 42 chr20 38748756 38748866 -33405016 - L1MC4a LINE L1 -1903 5905 5787 3146 174 91 50 chr20 38748889 38748991 -33404891 - L1MC4 LINE L1 0 8042 7946 2138 107 3 10 chr20 38748991 38749291 -33404591 - AluSg SINE Alu -12 298 1 3146 174 91 50 chr20 38749291 38749329 -33404553 - L1MC4 LINE L1 -96 7946 7911 1826 193 31 54 chr20 38749329 38749753 -33404129 + MLT2D LTR ERVL 1 414 0 3146 174 91 50 chr20 38749753 38750521 -33403361 - L1MC4 LINE L1 -131 7911 7095 522 242 39 39 chr20 38750536 38750689 -33403193 - L1MC4 LINE L1 -1069 6973 6821 * 847 164 6 18 chr20 38750680 38750845 -33403037 + L1MB2 LINE L1 5856 6018 -153 731 135 35 71 chr20 38750856 38750997 -33402885 - LTR24B LTR ERV1 -170 406 271 1507 155 18 36 chr20 38750998 38751276 -33402606 + AluJb SINE Alu 29 301 -11 363 169 46 0 chr20 38751455 38751520 -33402362 - MER31-int LTR ERV1 -239 4697 4630 1938 112 6 68 chr20 38751520 38751842 -33402040 - AluJo SINE Alu -10 302 1 1627 191 26 15 chr20 38751842 38752183 -33401699 - MER31-int LTR ERV1 -478 5853 5509 1718 161 7 4 chr20 38752201 38752480 -33401402 - AluSx SINE Alu -1 311 32 2162 128 0 0 chr20 38752517 38752813 -33401069 - AluSx SINE Alu -16 296 1 2009 143 25 6 chr20 38752815 38753137 -33400745 - MER31-int LTR ERV1 -813 5518 5191 767 138 11 76 chr20 38753360 38753410 -33400472 - MER31-int LTR ERV1 -1102 3834 3782 1503 153 6 86 chr20 38753410 38753737 -33400145 + AluJo SINE Alu 6 306 -6 767 138 11 76 chr20 38753737 38753844 -33400038 - MER31-int LTR ERV1 -1154 3782 3721 489 169 155 7 chr20 38754367 38754509 -33399373 + L1MB3 LINE L1 6007 6169 -14 204 97 0 0 chr20 38754523 38754554 -33399328 + (CA)n Simple_repeat Simple_repeat 1 31 0 1200 151 30 0 chr20 38754569 38754768 -33399114 - MER2 DNA MER2_type -1 344 140 1826 167 0 26 chr20 38754769 38755080 -33398802 + AluJb SINE Alu 1 303 -9 2028 152 0 3 chr20 38755240 38755549 -33398333 + AluSx SINE Alu 1 308 -4 1870 125 3 67 chr20 38755559 38755872 -33398010 + AluSg SINE Alu 1 293 -17 1470 204 31 3 chr20 38755967 38756256 -33397626 - AluJb SINE Alu -15 297 1 328 296 130 25 chr20 38756276 38756553 -33397329 + L1MC4a LINE L1 5628 5933 -1875 1392 160 13 0 chr20 38756558 38756783 -33397099 + AluJb SINE Alu 84 311 -1 2089 126 3 7 chr20 38756830 38757123 -33396759 - AluSq SINE Alu -21 292 1 2265 110 0 13 chr20 38757175 38757492 -33396390 - AluSq SINE Alu 0 313 1 702 118 67 8 chr20 38757571 38757690 -33396192 - L1MB3 LINE L1 -11 6172 6047 2266 90 27 13 chr20 38757704 38758005 -33395877 - AluY SINE Alu -6 305 1 831 83 0 18 chr20 38758008 38758117 -33395765 - AluSg/x SINE Alu -20 290 184 1678 101 186 4 chr20 38758361 38758619 -33395263 + AluSq SINE Alu 1 305 -8 484 274 44 22 chr20 38758874 38759100 -33394782 + L1MC4 LINE L1 7310 7540 -502 2256 98 3 0 chr20 38759115 38759402 -33394480 + AluSg SINE Alu 5 292 -18 1310 200 0 16 chr20 38759402 38759652 -33394230 + AluJo SINE Alu 45 290 -22 1390 222 39 66 chr20 38759674 38760039 -33393843 + L1MC4 LINE L1 7535 7825 -170 2392 96 3 3 chr20 38760039 38760352 -33393530 + AluSp SINE Alu 1 313 0 1390 222 39 66 chr20 38760352 38760519 -33393363 + L1MC4 LINE L1 7825 7995 0 1889 132 0 35 chr20 38760634 38760964 -33392918 + AluSx SINE Alu 8 327 0 340 250 139 15 chr20 38761231 38761400 -33392482 - MIR3 SINE MIR -40 168 3 1574 166 32 51 chr20 38761425 38761738 -33392144 + AluJo SINE Alu 1 307 -5 1552 160 32 102 chr20 38761766 38761842 -33392040 + MER7A DNA MER2_type 1 81 -2957 1715 151 58 4 chr20 38761842 38762120 -33391762 + AluSx SINE Alu 2 294 -18 1552 160 32 102 chr20 38762120 38762417 -33391465 + MER7A DNA MER2_type 81 346 0 1198 156 268 7 chr20 38762678 38762954 -33390928 - MER7A DNA MER2_type 0 346 1 2267 97 3 7 chr20 38763132 38763432 -33390450 + AluSx SINE Alu 1 299 -13 1644 187 13 3 chr20 38763443 38763742 -33390140 + AluJo SINE Alu 1 302 -10 1194 205 0 0 chr20 38764019 38764224 -33389658 + AluJo SINE Alu 3 207 -105 1749 127 28 99 chr20 38764394 38764716 -33389166 - AluJb SINE Alu -13 299 1 1003 110 0 0 chr20 38764721 38764848 -33389034 - FLAM_C SINE Alu -16 127 1 1593 200 11 4 chr20 38765416 38765696 -33388186 + AluJo SINE Alu 1 282 -30 2147 108 14 7 chr20 38765702 38765999 -33387883 - AluSq SINE Alu -14 299 1 206 329 47 12 chr20 38766116 38766201 -33387681 - L2 LINE L2 -287 2985 2898 2009 131 10 7 chr20 38766697 38766994 -33386888 - AluSx SINE Alu -14 298 1 287 272 14 25 chr20 38767303 38767423 -33386459 + MIR SINE MIR 25 147 -62 2934 136 75 51 chr20 38768708 38769258 -33384624 + MER51A LTR ERV1 1 563 -71 1654 169 0 25 chr20 38769259 38769537 -33384345 + AluSx SINE Alu 21 291 -21 2472 91 0 0 chr20 38769701 38770010 -33383872 + AluSc SINE Alu 1 309 0 225 0 0 0 chr20 38770438 38770463 -33383419 + (A)n Simple_repeat Simple_repeat 1 25 0 2252 105 0 20 chr20 38770506 38770812 -33383070 - AluSx SINE Alu -12 300 1 349 259 23 52 chr20 38770932 38771008 -33382874 + L1MC/D LINE L1 5318 5395 -2413 2131 85 3 20 chr20 38771008 38771326 -33382556 - AluSc SINE Alu 0 309 1 349 259 23 52 chr20 38771326 38771423 -33382459 + L1MC/D LINE L1 5395 5486 -2322 335 240 60 47 chr20 38771426 38771576 -33382306 + L2 LINE L2 2743 2894 -420 2347 96 0 10 chr20 38771741 38772043 -33381839 + AluSx SINE Alu 1 299 -13 2182 124 10 0 chr20 38772545 38772843 -33381039 - AluSg SINE Alu -9 301 1 1955 155 3 3 chr20 38772943 38773240 -33380642 + AluJb SINE Alu 1 297 -15 743 183 0 22 chr20 38773358 38773495 -33380387 + FLAM_C SINE Alu 2 135 -8 237 386 62 4 chr20 38773558 38773799 -33380083 - MIR SINE MIR -6 256 2 785 205 84 0 chr20 38774047 38774213 -33379669 + FRAM SINE Alu 1 176 0 2170 101 7 0 chr20 38774220 38774517 -33379365 - AluSx SINE Alu -13 299 1 26 50 0 0 chr20 38775219 38775259 -33378623 + AT_rich Low_complexity Low_complexity 1 40 0 2159 125 0 0 chr20 38775271 38775582 -33378300 - AluSx SINE Alu 0 312 2 609 263 99 48 chr20 38775592 38775870 -33378012 - L1ME4a LINE L1 -4 6117 5854 1578 179 0 24 chr20 38775870 38776190 -33377692 + AluJb SINE Alu 1 312 0 609 263 99 48 chr20 38776190 38776218 -33377664 - L1ME4a LINE L1 -267 5854 5829 2103 133 28 6 chr20 38776218 38776437 -33377445 - MER46B DNA MER2_type -2495 236 130 333 118 0 0 chr20 38776446 38776497 -33377385 + (TG)n Simple_repeat Simple_repeat 2 52 0 2000 88 39 14 chr20 38776497 38776770 -33377112 - AluSx SINE Alu -29 283 1 2103 133 28 6 chr20 38776770 38776903 -33376979 - MER46B DNA MER2_type -2601 130 1 609 263 99 48 chr20 38776903 38777070 -33376812 - L1ME4a LINE L1 -292 5829 5619 1389 75 38 0 chr20 38777070 38777256 -33376626 + AluSg SINE Alu 1 193 -117 1648 108 129 21 chr20 38777256 38777535 -33376347 - AluSg1 SINE Alu 0 309 1 374 294 61 29 chr20 38777589 38777902 -33375980 - L1ME4a LINE L1 -727 5443 5088 2030 123 3 19 chr20 38777909 38778226 -33375656 - AluSx SINE Alu 0 312 1 252 77 0 0 chr20 38778420 38778459 -33375423 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1786 92 95 0 chr20 38778461 38778723 -33375159 - AluSx SINE Alu -25 287 1 1029 171 16 0 chr20 38778930 38779166 -33374716 - AluJ SINE Alu 0 358 120 2028 105 3 0 chr20 38779182 38779467 -33374415 + AluSx SINE Alu 1 286 -26 233 214 0 0 chr20 38779467 38779509 -33374373 + (CATA)n Simple_repeat Simple_repeat 3 44 0 836 133 0 0 chr20 38779509 38779629 -33374253 - AluJ SINE Alu -192 120 1 2279 97 0 0 chr20 38779872 38780181 -33373701 + AluSx SINE Alu 1 309 -3 1606 178 7 14 chr20 38780960 38781247 -33372635 + AluJo SINE Alu 1 285 -27 1990 115 0 14 chr20 38781309 38781445 -33372437 + AluSq SINE Alu 1 137 -180 2099 89 17 3 chr20 38781445 38781747 -33372135 + AluSq SINE Alu 1 306 -7 1990 115 0 14 chr20 38781747 38781931 -33371951 + AluSq SINE Alu 137 317 0 2376 60 0 7 chr20 38781938 38782238 -33371644 + AluY SINE Alu 1 298 -13 2123 101 0 16 chr20 38782856 38783163 -33370719 - AluSg SINE Alu -8 302 1 239 136 18 7 chr20 38783279 38783507 -33370375 + AluSx SINE Alu 1 298 -4 1996 136 0 0 chr20 38784541 38784836 -33369046 - AluSx SINE Alu -17 295 1 232 170 170 0 chr20 38785401 38785448 -33368434 + L1P4 LINE L1 5535 5589 -576 1915 124 18 0 chr20 38785585 38785867 -33368015 + AluSx SINE Alu 1 287 -25 258 32 0 0 chr20 38785879 38785910 -33367972 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 * 327 78 0 0 chr20 38785909 38785960 -33367922 + (TATG)n Simple_repeat Simple_repeat 2 52 0 2197 89 0 0 chr20 38786353 38786635 -33367247 + AluSx SINE Alu 1 282 -30 506 342 77 4 chr20 38787503 38787763 -33366119 + L3 LINE CR1 1198 1476 -101 1869 143 35 48 chr20 38787764 38787939 -33365943 + THE1C LTR MaLR 1 177 -198 1957 138 0 22 chr20 38787939 38788075 -33365807 + AluSx SINE Alu 1 138 -174 2123 116 10 0 chr20 38788075 38788378 -33365504 + AluSp SINE Alu 1 306 -7 1957 138 0 22 chr20 38788378 38788560 -33365322 + AluSx SINE Alu 138 312 0 1869 143 35 48 chr20 38788560 38788756 -33365126 + THE1C LTR MaLR 177 367 -8 2053 124 13 0 chr20 38789029 38789328 -33364554 - AluSx SINE Alu -9 303 1 23 0 0 0 chr20 38789330 38789353 -33364529 + AT_rich Low_complexity Low_complexity 1 23 0 916 153 0 19 chr20 38789361 38789518 -33364364 + FRAM SINE Alu 13 166 -10 870 78 4 2 chr20 38789520 38789779 -33364103 + AluY SINE Alu 1 309 -2 1793 145 0 33 chr20 38789810 38790114 -33363768 + AluSx SINE Alu 9 302 -10 2217 96 3 7 chr20 38790440 38790743 -33363139 - AluSp SINE Alu -11 302 1 2179 105 0 0 chr20 38790747 38791043 -33362839 - AluSg SINE Alu -14 296 1 1794 183 0 0 chr20 38791242 38791729 -33362153 + AluJb SINE Alu 1 487 0 2222 90 10 6 chr20 38792116 38792427 -33361455 - AluSx SINE Alu 0 312 1 182 146 0 24 chr20 38793236 38793277 -33360605 + (TTC)n Simple_repeat Simple_repeat 2 41 0 2239 105 0 0 chr20 38793283 38793589 -33360293 - AluSx SINE Alu -6 306 1 229 0 0 0 chr20 38793596 38793622 -33360260 - HY1 scRNA scRNA -1 111 86 1489 194 0 44 chr20 38793827 38794014 -33359868 - AluJo SINE Alu -7 305 136 1678 163 32 0 chr20 38794014 38794296 -33359586 - AluJb SINE Alu -21 291 1 1489 194 0 44 chr20 38794296 38794427 -33359455 - AluJo SINE Alu -176 136 1 1266 146 5 5 chr20 38794501 38794720 -33359162 + AluJo SINE Alu 87 305 -7 571 224 60 51 chr20 38794720 38794896 -33358986 - MIR3 SINE MIR -26 182 1 2148 105 3 0 chr20 38794964 38795250 -33358632 - AluSx SINE Alu -25 287 1 2132 106 0 7 chr20 38795995 38796288 -33357594 + AluSx SINE Alu 1 291 -21 524 293 63 29 chr20 38796377 38796481 -33357401 + MER5A DNA MER1_type 9 123 -66 2350 84 0 0 chr20 38796481 38796792 -33357090 - AluY SINE Alu 0 311 1 524 293 63 29 chr20 38796792 38796861 -33357021 + MER5A DNA MER1_type 123 188 -1 1844 137 7 3 chr20 38796927 38797219 -33356663 + AluJb SINE Alu 1 293 -19 5827 64 17 84 chr20 38797238 38799198 -33354684 + SVA Other Other 1 1377 -9 2576 35 3 0 chr20 38799198 38799508 -33354374 + AluY SINE Alu 1 311 0 697 104 61 0 chr20 38799590 38799705 -33354177 + L1MC1 LINE L1 6211 6332 -1 368 205 86 73 chr20 38799801 38799952 -33353930 + MER58C DNA MER1_type 63 215 0 2105 101 20 0 chr20 38799969 38800265 -33353617 - AluSx SINE Alu -10 302 1 2305 81 3 0 chr20 38800265 38800562 -33353320 - AluSx SINE Alu -9 303 6 1479 69 0 25 chr20 38800693 38800895 -33352987 + MER107 DNA MER1_type 1 197 0 2009 123 3 19 chr20 38801456 38801489 -33352393 - AluSx SINE Alu 0 312 280 180 0 0 0 chr20 38801489 38801509 -33352373 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2009 123 3 19 chr20 38801509 38801792 -33352090 - AluSx SINE Alu -32 280 1 1310 70 16 16 chr20 38801794 38801980 -33351902 - L1PA8 LINE L1 -8 6164 5979 277 279 90 123 chr20 38802005 38802179 -33351703 + L2 LINE L2 2783 2961 -311 1996 119 0 14 chr20 38802179 38802473 -33351409 - AluJo SINE Alu -22 290 1 277 279 90 123 chr20 38802473 38802775 -33351107 + L2 LINE L2 2961 3241 -31 251 163 0 47 chr20 38803076 38803119 -33350763 + AluJb SINE Alu 1 41 -259 1664 162 10 20 chr20 38803175 38803471 -33350411 + AluJb SINE Alu 20 312 0 295 214 100 63 chr20 38803889 38803999 -33349883 - MER5A DNA MER1_type 0 189 63 465 232 148 7 chr20 38804212 38804367 -33349515 + MLT1K LTR MaLR 412 588 0 1667 191 3 3 chr20 38804397 38804690 -33349192 - AluJb SINE Alu -19 293 1 181 233 100 17 chr20 38804705 38804765 -33349117 - MER5A DNA MER1_type -124 65 1 1797 125 66 3 chr20 38805156 38805445 -33348437 - AluSx SINE Alu -5 307 1 381 324 83 37 chr20 38805470 38805686 -33348196 + L2 LINE L2 2553 2778 -536 750 101 0 0 chr20 38805757 38805856 -33348026 + AluSc SINE Alu 1 99 -210 627 280 126 5 chr20 38805860 38806074 -33347808 - MLT1J LTR MaLR -227 284 45 545 223 13 7 chr20 38806094 38806263 -33347619 - L1MB7 LINE L1 -39 6127 5949 219 378 144 11 chr20 38806292 38806480 -33347402 + L2 LINE L2 3033 3245 -27 2495 146 61 5 chr20 38806533 38806957 -33346925 + MER83 LTR ERV1 1 448 0 864 44 106 0 chr20 38807006 38807119 -33346763 + AluYa5 SINE Alu 1 125 -186 1992 47 55 0 chr20 38807119 38807394 -33346488 + AluY SINE Alu 23 311 0 1550 172 28 14 chr20 38807543 38807833 -33346049 + AluJb SINE Alu 8 301 -11 1789 100 0 8 chr20 38807861 38808134 -33345748 - AluSx SINE Alu 0 307 37 688 179 26 8 chr20 38808238 38808355 -33345527 + AluJo SINE Alu 120 238 -74 841 184 0 7 chr20 38808390 38808531 -33345351 - FAM SINE Alu -45 140 1 807 245 61 66 chr20 38808968 38809143 -33344739 - L1MC4 LINE L1 -114 7928 7754 1923 148 0 7 chr20 38809143 38809447 -33344435 - AluSx SINE Alu -10 302 1 807 245 61 66 chr20 38809447 38809712 -33344170 - L1MC4 LINE L1 -288 7754 7490 1873 144 3 3 chr20 38810126 38810417 -33343465 - AluJo SINE Alu -21 291 1 314 286 94 41 chr20 38810438 38810609 -33343273 + L1ME4a LINE L1 5895 6074 -47 331 276 172 0 chr20 38810766 38810900 -33342982 + L2 LINE L2 2925 3081 -232 1709 157 7 3 chr20 38810910 38811242 -33342640 + AluSq SINE Alu 1 333 0 566 213 115 40 chr20 38811407 38811581 -33342301 + MLT1L LTR MaLR 429 615 0 1769 170 0 16 chr20 38811676 38811993 -33341889 - AluJo SINE Alu 0 312 1 364 259 37 0 chr20 38812087 38812195 -33341687 - HAL1 LINE L1 -110 2397 2286 1663 172 26 0 chr20 38812257 38812559 -33341323 - AluSx SINE Alu -2 310 1 2304 71 0 3 chr20 38812688 38812983 -33340899 - AluSc SINE Alu -15 294 1 299 242 31 102 chr20 38813441 38813514 -33340368 + L1ME LINE L1 5640 5702 -419 1411 200 35 7 chr20 38813514 38813804 -33340078 - AluJb SINE Alu -14 298 1 299 242 31 102 chr20 38813804 38813858 -33340024 + L1ME LINE L1 5702 5758 -363 1590 155 15 0 chr20 38813880 38814145 -33339737 - AluJb SINE Alu -43 269 1 1905 138 3 10 chr20 38814177 38814489 -33339393 + AluSx SINE Alu 1 310 -2 1993 105 6 48 chr20 38814501 38814852 -33339030 + AluSp SINE Alu 12 313 0 293 258 0 162 chr20 38815044 38815242 -33338640 - MIR SINE MIR -1 261 96 229 281 156 0 chr20 38815254 38815350 -33338532 + L2 LINE L2 3203 3313 0 548 216 33 33 chr20 38815617 38815770 -33338112 - L1ME LINE L1 -559 5607 5455 1331 165 37 44 chr20 38816122 38816352 -33337530 + AluSx SINE Alu 42 271 -41 2063 102 16 13 chr20 38816352 38816655 -33337227 - AluSp SINE Alu -9 304 1 1331 165 37 44 chr20 38816655 38816697 -33337185 + AluSx SINE Alu 271 312 0 340 281 184 0 chr20 38816995 38817109 -33336773 + L2 LINE L2 3177 3311 -2 452 222 0 22 chr20 38817236 38817326 -33336556 - Tigger3(Golem) DNA MER2_type -1 3028 2941 2103 113 0 7 chr20 38817327 38817627 -33336255 - AluSx SINE Alu -14 298 1 3274 111 24 2 chr20 38817628 38818122 -33335760 - Tigger3b DNA MER2_type -650 581 77 707 188 0 0 chr20 38818122 38818239 -33335643 + FLAM_C SINE Alu 1 117 -26 2261 90 7 0 chr20 38818247 38818548 -33335334 - AluSc SINE Alu -1 308 6 1918 106 0 68 chr20 38818582 38818916 -33334966 + AluSx SINE Alu 1 312 0 424 167 90 0 chr20 38818916 38818994 -33334888 - Tigger3b DNA MER2_type -1146 85 1 355 278 10 10 chr20 38818995 38819092 -33334790 + L3 LINE CR1 1477 1573 -4 243 359 23 0 chr20 38819101 38819229 -33334653 + L2 LINE L2 2877 3007 -265 1093 201 9 5 chr20 38819315 38819539 -33334343 - AluJb SINE Alu -87 225 1 232 269 13 13 chr20 38820165 38820243 -33333639 + L1ME LINE L1 5641 5718 -403 27 22 0 22 chr20 38820243 38820257 -33333625 + AT_rich Low_complexity Low_complexity 1 14 -30 1225 102 15 39 chr20 38820257 38820432 -33333450 - L1MA2 LINE L1 0 6304 6133 1886 133 32 0 chr20 38820432 38820717 -33333165 - AluSq SINE Alu -19 294 1 1225 102 15 39 chr20 38820717 38820746 -33333136 - L1MA2 LINE L1 -171 6133 6105 27 22 0 22 chr20 38820746 38820776 -33333106 + AT_rich Low_complexity Low_complexity 14 44 0 3359 93 14 6 chr20 38820776 38821261 -33332621 - L1MA2 LINE L1 -184 6120 5632 2020 130 0 13 chr20 38821403 38821693 -33332189 + AluSq SINE Alu 1 288 -25 255 93 0 0 chr20 38821693 38821736 -33332146 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2020 130 0 13 chr20 38821736 38821752 -33332130 + AluSq SINE Alu 288 303 -10 23 0 0 29 chr20 38821911 38821926 -33331956 + AT_rich Low_complexity Low_complexity 1 15 -18 2178 108 0 13 chr20 38821926 38822241 -33331641 + AluSx SINE Alu 1 311 -1 23 0 0 29 chr20 38822241 38822259 -33331623 + AT_rich Low_complexity Low_complexity 15 33 0 6920 61 8 170 chr20 38822303 38823707 -33330175 + SVA Other Other 1 1176 -210 1023 269 157 19 chr20 38824049 38824567 -33329315 - L2 LINE L2 0 3313 2703 640 300 99 44 chr20 38824562 38824664 -33329218 - L2 LINE L2 -3 3310 3215 * 1849 155 3 3 chr20 38824664 38824961 -33328921 + AluJo SINE Alu 6 302 -10 640 300 99 44 chr20 38824961 38825353 -33328529 - L2 LINE L2 -98 3215 2796 222 300 0 0 chr20 38825401 38825471 -33328411 + A-rich Low_complexity Low_complexity 1 70 0 186 298 18 0 chr20 38825471 38825528 -33328354 - L2 LINE L2 -600 2714 2657 1137 107 6 0 chr20 38825575 38825734 -33328148 + AluSx SINE Alu 2 161 -151 2458 44 0 0 chr20 38825759 38826057 -33327825 - AluY SINE Alu -13 298 1 387 77 44 121 chr20 38826229 38826320 -33327562 + L1ME1 LINE L1 6081 6164 0 1614 163 33 0 chr20 38826354 38826475 -33327407 + AluJo SINE Alu 1 117 -195 207 0 0 0 chr20 38826475 38826498 -33327384 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1614 163 33 0 chr20 38826498 38826652 -33327230 + AluJo SINE Alu 117 285 -27 225 329 177 0 chr20 38826887 38827045 -33326837 - L2 LINE L2 -36 3236 3051 2236 93 7 0 chr20 38827454 38827754 -33326128 - AluSx SINE Alu -10 302 1 1747 133 30 23 chr20 38827904 38828204 -33325678 + AluJb SINE Alu 1 302 -10 200 213 0 0 chr20 38828523 38828570 -33325312 + A-rich Low_complexity Low_complexity 1 47 0 2135 110 3 13 chr20 38828726 38829034 -33324848 - AluSx SINE Alu -7 305 1 1772 142 31 0 chr20 38829105 38829275 -33324607 - AluSx SINE Alu -15 297 113 189 0 0 0 chr20 38829275 38829296 -33324586 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1772 142 31 0 chr20 38829296 38829413 -33324469 - AluSx SINE Alu -199 113 1 916 193 0 0 chr20 38829468 38829629 -33324253 + FRAM SINE Alu 4 164 -2 308 258 26 123 chr20 38829666 38829821 -33324061 - MIR SINE MIR -109 153 14 655 255 201 20 chr20 38830375 38830673 -33323209 + L2 LINE L2 2928 3279 -34 413 222 33 11 chr20 38830811 38830901 -33322981 + MARNA DNA Mariner 267 358 -228 355 255 48 35 chr20 38831397 38831542 -33322340 + MER103 DNA DNA 20 166 0 2058 95 0 14 chr20 38831739 38832022 -33321860 + AluSx SINE Alu 1 279 -33 25 51 0 0 chr20 38832039 38832078 -33321804 + AT_rich Low_complexity Low_complexity 1 39 0 636 239 61 6 chr20 38832401 38832564 -33321318 + MIR SINE MIR 31 202 -60 488 224 67 22 chr20 38832788 38832922 -33320960 + MIR SINE MIR 13 152 -110 863 129 0 16 chr20 38832945 38833182 -33320700 + AluSx SINE Alu 2 298 -12 249 212 45 15 chr20 38833467 38833533 -33320349 + GA-rich Low_complexity Low_complexity 5 72 0 2358 80 0 0 chr20 38833761 38834060 -33319822 + AluSq SINE Alu 1 299 -14 228 197 28 70 chr20 38835134 38835205 -33318677 + LTR67 LTR ERVL 490 557 0 2364 93 0 0 chr20 38835246 38835558 -33318324 - AluSx SINE Alu 0 312 1 230 311 0 0 chr20 38835596 38835657 -33318225 - MIR SINE MIR -114 148 88 547 217 0 27 chr20 38836058 38836242 -33317640 + T-rich Low_complexity Low_complexity 1 179 0 * 702 216 8 8 chr20 38836202 38836469 -33317413 + CT-rich Low_complexity Low_complexity 1 267 0 964 175 6 6 chr20 38836470 38836636 -33317246 - FAM SINE Alu -9 166 1 23 33 0 0 chr20 38836665 38836695 -33317187 + AT_rich Low_complexity Low_complexity 1 30 0 3327 202 32 32 chr20 38836702 38837484 -33316398 - L1ME1 LINE L1 -14 6152 5371 1812 146 0 20 chr20 38837503 38837804 -33316078 + AluSx SINE Alu 16 310 -2 1199 198 0 4 chr20 38838435 38838673 -33315209 - AluJb SINE Alu 0 312 76 1946 117 20 7 chr20 38838676 38838976 -33314906 - AluSx SINE Alu 0 312 9 227 246 123 0 chr20 38839342 38839399 -33314483 - MIR SINE MIR -120 142 79 266 276 143 0 chr20 38839521 38839619 -33314263 + L2 LINE L2 3202 3313 0 557 329 38 14 chr20 38839674 38839887 -33313995 - MIR SINE MIR 0 262 45 2107 96 0 23 chr20 38840613 38840914 -33312968 + AluSx SINE Alu 1 294 -18 1631 128 80 31 chr20 38841050 38841369 -33312513 - AluJb SINE Alu 0 312 1 1966 98 91 0 chr20 38841374 38841660 -33312222 - AluSx SINE Alu 0 312 1 897 159 0 0 chr20 38841718 38841863 -33312019 - AluJb SINE Alu -16 296 152 698 130 0 0 chr20 38841863 38841963 -33311919 + AluSg/x SINE Alu 198 297 -13 2148 100 0 7 chr20 38842022 38842321 -33311561 - AluSg SINE Alu -13 297 1 325 218 168 20 chr20 38842633 38842734 -33311148 - L1ME3A LINE L1 -53 6117 6002 191 88 29 0 chr20 38842752 38842786 -33311096 + (TG)n Simple_repeat Simple_repeat 2 36 0 1304 236 28 20 chr20 38842853 38843209 -33310673 - L1ME1 LINE L1 -18 6148 5790 260 294 0 0 chr20 38843288 38843356 -33310526 + L2 LINE L2 3246 3313 0 2130 109 3 16 chr20 38843376 38843688 -33310194 + AluSx SINE Alu 1 308 -4 227 167 37 0 chr20 38843791 38843845 -33310037 + (TA)n Simple_repeat Simple_repeat 1 56 0 24 85 0 0 chr20 38843866 38843925 -33309957 + AT_rich Low_complexity Low_complexity 1 59 0 233 300 173 0 chr20 38844186 38844296 -33309586 + MIR3 SINE MIR 55 183 -25 629 262 148 16 chr20 38844319 38844502 -33309380 + MIR SINE MIR 5 211 -51 2150 109 0 7 chr20 38844555 38844858 -33309024 - AluSx SINE Alu -11 301 1 297 288 12 0 chr20 38845234 38845314 -33308568 + L2 LINE L2 3219 3299 -14 183 42 0 0 chr20 38845315 38845339 -33308543 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 572 301 99 46 chr20 38845344 38845689 -33308193 + L2 LINE L2 2900 3262 -51 508 261 140 26 chr20 38846244 38846508 -33307374 + L2 LINE L2 3020 3313 0 2082 108 3 3 chr20 38846542 38846837 -33307045 + AluSx SINE Alu 2 296 -16 755 211 45 72 chr20 38846884 38847107 -33306775 + L2 LINE L2 3095 3311 -2 1615 163 13 27 chr20 38847291 38847425 -33306457 + AluJo SINE Alu 1 135 -177 2212 86 0 25 chr20 38847425 38847740 -33306142 + AluY SINE Alu 1 307 -4 1615 163 13 27 chr20 38847740 38847906 -33305976 + AluJo SINE Alu 135 297 -15 2068 128 0 6 chr20 38847937 38848249 -33305633 - AluSx SINE Alu -2 310 1 744 197 31 105 chr20 38848357 38848419 -33305463 - L1ME1 LINE L1 -528 5638 5573 1354 196 35 7 chr20 38848419 38848704 -33305178 + AluJo SINE Alu 1 293 -19 2097 105 0 10 chr20 38848711 38849006 -33304876 + AluSx SINE Alu 10 301 -11 744 197 31 105 chr20 38849006 38849163 -33304719 - L1ME1 LINE L1 -599 5567 5428 853 160 29 34 chr20 38849171 38849346 -33304536 - AluJo SINE Alu -138 174 1 1339 183 149 0 chr20 38849346 38849668 -33304214 + MER63 DNA MER1_type 693 1062 0 226 178 0 0 chr20 38849668 38849713 -33304169 - L1ME1 LINE L1 -859 5307 5263 1117 180 0 38 chr20 38849717 38849928 -33303954 + MER3 DNA MER1_type 1 203 -6 309 152 22 0 chr20 38850025 38850071 -33303811 + MIR SINE MIR 14 60 -202 1619 134 7 28 chr20 38850098 38850389 -33303493 + AluJo SINE Alu 21 305 -7 202 296 0 56 chr20 38850389 38850460 -33303422 + MIR SINE MIR 194 260 -2 2165 92 7 0 chr20 38850620 38850924 -33302958 - AluSx SINE Alu -6 306 1 299 244 50 34 chr20 38851730 38851849 -33302033 + MIR SINE MIR 24 144 -118 583 268 53 57 chr20 38851882 38852110 -33301772 + MIR SINE MIR 22 248 -14 338 314 16 24 chr20 38852153 38852277 -33301605 - MIR SINE MIR -71 191 69 583 241 146 41 chr20 38852302 38852522 -33301360 + MIR SINE MIR 2 244 -18 1208 263 83 49 chr20 38852705 38853005 -33300877 + L2 LINE L2 2463 2751 -562 2435 54 0 0 chr20 38853005 38853300 -33300582 + AluSc SINE Alu 1 295 -14 1208 263 83 49 chr20 38853300 38853477 -33300405 + L2 LINE L2 2751 2920 -393 1782 128 47 3 chr20 38853477 38853775 -33300107 - AluSx SINE Alu -1 311 1 1208 263 83 49 chr20 38853775 38854106 -33299776 + L2 LINE L2 2920 3305 -8 2281 101 0 0 chr20 38854142 38854450 -33299432 - AluSx SINE Alu -4 308 1 1740 148 3 17 chr20 38854453 38854751 -33299131 - AluJb SINE Alu -18 294 1 578 244 47 0 chr20 38855004 38855131 -33298751 - L2 LINE L2 -1 3312 3180 769 231 119 45 chr20 38855222 38855276 -33298606 - MIR SINE MIR 0 262 213 1872 101 4 11 chr20 38855276 38855544 -33298338 - AluSq SINE Alu -17 296 31 769 231 119 45 chr20 38855544 38855732 -33298150 - MIR SINE MIR -49 213 2 199 260 265 22 chr20 38855745 38855926 -33297956 - L2 LINE L2 -221 3051 2827 266 259 62 18 chr20 38856047 38856159 -33297723 - L3 LINE CR1 -305 1272 1156 1953 127 0 3 chr20 38856567 38856858 -33297024 + AluSg SINE Alu 1 290 -20 1836 120 32 7 chr20 38857201 38857485 -33296397 - AluJb SINE Alu -13 299 9 1917 202 63 87 chr20 38857587 38857678 -33296204 - MLT1E2 LTR MaLR -4 622 530 1102 159 12 0 chr20 38857678 38857848 -33296034 - FAM SINE Alu -3 172 1 1917 202 63 87 chr20 38857848 38858403 -33295479 - MLT1E2 LTR MaLR -96 530 3 780 142 22 30 chr20 38858534 38858668 -33295214 - AluJo SINE Alu -178 134 2 1077 242 33 35 chr20 38858669 38859094 -33294788 - L1MC5 LINE L1 -303 7658 7235 440 202 11 9 chr20 38859144 38859277 -33294605 - L1MEc LINE L1 -3905 2345 2217 2652 10 0 0 chr20 38859277 38859577 -33294305 + AluYa5 SINE Alu 1 300 -11 460 246 154 16 chr20 38859582 38859666 -33294216 - L1MEc LINE L1 -4127 2269 2198 1987 120 0 16 chr20 38859666 38859999 -33293883 - AluSx SINE Alu 0 312 1 460 246 154 16 chr20 38859999 38860219 -33293663 - L1MEc LINE L1 -4198 2198 1923 1875 114 52 3 chr20 38860219 38860509 -33293373 - AluSc SINE Alu -5 304 1 317 231 106 19 chr20 38860527 38860631 -33293251 - L1MEc LINE L1 -6214 182 70 1639 159 10 26 chr20 38860677 38860979 -33292903 - AluJo SINE Alu -15 297 1 1720 156 7 3 chr20 38860992 38861281 -33292601 - AluSx SINE Alu -12 300 11 235 207 17 0 chr20 38861304 38861362 -33292520 - L1MC4a LINE L1 -869 6939 6881 429 20 0 0 chr20 38861368 38861418 -33292464 + (TG)n Simple_repeat Simple_repeat 1 50 0 512 234 78 0 chr20 38861419 38861547 -33292335 + MER58B DNA MER1_type 200 337 -4 335 367 27 7 chr20 38862423 38862573 -33291309 + MIR SINE MIR 17 169 -93 193 299 75 15 chr20 38862691 38862758 -33291124 + L2 LINE L2 3188 3258 -14 1924 124 7 7 chr20 38863251 38863541 -33290341 + AluSx SINE Alu 1 290 -22 1309 74 0 11 chr20 38863541 38863716 -33290166 + AluY SINE Alu 1 173 -138 1581 143 10 75 chr20 38863857 38864165 -33289717 + AluJo SINE Alu 2 289 -23 440 217 22 0 chr20 38864176 38864268 -33289614 + MIR SINE MIR 147 240 -22 343 271 0 0 chr20 38864340 38864410 -33289472 - L2 LINE L2 -2 3270 3201 433 344 28 42 chr20 38864590 38864878 -33289004 - L2 LINE L2 0 3313 3030 1784 159 3 7 chr20 38864901 38865203 -33288679 + AluJo SINE Alu 1 301 -11 500 198 12 0 chr20 38865252 38865338 -33288544 + L2 LINE L2 3203 3289 -24 272 283 166 5 chr20 38865343 38865676 -33288206 - L2 LINE L2 -235 3037 2655 439 307 260 18 chr20 38865689 38866312 -33287570 - L2 LINE L2 -830 2484 1711 234 0 0 0 chr20 38866312 38866338 -33287544 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2132 83 0 0 chr20 38866342 38866618 -33287264 - AluSq SINE Alu -37 276 1 243 243 101 40 chr20 38866664 38866812 -33287070 - L2 LINE L2 -273 2999 2843 839 277 9 22 chr20 38867480 38867704 -33286178 + MIR SINE MIR 23 243 -19 1320 168 16 87 chr20 38868119 38868292 -33285590 - AluSx SINE Alu -4 298 157 2260 67 0 17 chr20 38868292 38868589 -33285293 - AluY SINE Alu -19 292 1 1320 168 16 87 chr20 38868589 38868736 -33285146 - AluSx SINE Alu -145 157 1 575 312 141 37 chr20 38869105 38869654 -33284228 - L2 LINE L2 -339 2975 2352 1652 149 44 0 chr20 38869654 38869949 -33283933 - AluJo SINE Alu -3 309 2 575 312 141 37 chr20 38869949 38870024 -33283858 - L2 LINE L2 -962 2352 2286 386 288 65 13 chr20 38870035 38870188 -33283694 + MIR SINE MIR 67 227 -35 331 242 15 129 chr20 38871346 38871478 -33282404 - L2 LINE L2 0 3272 3156 1100 149 14 54 chr20 38871894 38872054 -33281828 - AluJo SINE Alu -16 296 146 2085 100 21 0 chr20 38872054 38872345 -33281537 - AluSx SINE Alu -15 297 1 1100 149 14 54 chr20 38872345 38872406 -33281476 - AluJo SINE Alu -166 146 84 540 288 83 5 chr20 38873023 38873228 -33280654 + MIR SINE MIR 30 250 -12 892 168 18 36 chr20 38873338 38873505 -33280377 - FRAM SINE Alu -12 164 1 379 308 110 7 chr20 38873624 38873770 -33280112 + MIR SINE MIR 20 180 -82 1882 174 25 6 chr20 38874758 38874982 -33278900 + L1MB5 LINE L1 5799 6034 -140 1868 164 3 0 chr20 38874982 38875281 -33278601 - AluJb SINE Alu -12 300 1 1882 174 25 6 chr20 38875281 38875417 -33278465 + L1MB5 LINE L1 6034 6166 -8 1656 136 100 4 chr20 38875418 38875698 -33278184 - AluJb SINE Alu -5 307 1 589 315 73 5 chr20 38878477 38878696 -33275186 + MIR SINE MIR 28 261 -1 2021 119 0 7 chr20 38878774 38879067 -33274815 - AluSx SINE Alu -21 291 1 1686 153 78 0 chr20 38879732 38880014 -33273868 - AluSg SINE Alu -6 304 1 2232 98 0 0 chr20 38880046 38880343 -33273539 + AluSc SINE Alu 1 297 -12 518 130 0 0 chr20 38880456 38880548 -33273334 - AluJ/FRAM SINE Alu -2 310 219 611 286 104 9 chr20 38881082 38881313 -33272569 + MIR SINE MIR 8 260 -2 830 144 0 34 chr20 38881369 38881515 -33272367 - AluJo SINE Alu -171 141 1 1479 160 26 64 chr20 38881526 38881839 -33272043 - AluJo SINE Alu -11 301 1 472 155 99 68 chr20 38882475 38882585 -33271297 - L1ME4a LINE L1 -1 6120 6002 2209 99 0 3 chr20 38882585 38882888 -33270994 - AluSq SINE Alu -11 302 1 472 155 99 68 chr20 38882888 38882938 -33270944 - L1ME4a LINE L1 -119 6002 5955 766 162 8 0 chr20 38882964 38883081 -33270801 + AluJo/FLAM SINE Alu 2 119 -193 2166 98 0 0 chr20 38883083 38883391 -33270491 - AluSx SINE Alu 0 308 1 2072 104 0 13 chr20 38883412 38883719 -33270163 + AluSx SINE Alu 1 303 -9 1588 113 90 23 chr20 38883788 38884054 -33269828 - AluSq SINE Alu -12 301 18 470 141 14 0 chr20 38884054 38884125 -33269757 - AluS SINE Alu -240 73 2 935 145 0 0 chr20 38884208 38884353 -33269529 + AluJb SINE Alu 156 300 -12 688 200 24 0 chr20 38884364 38884489 -33269393 + FLAM_A SINE Alu 1 128 -5 1858 119 21 11 chr20 38884542 38884828 -33269054 - AluSq SINE Alu -15 298 10 25 0 0 0 chr20 38885048 38885073 -33268809 + AT_rich Low_complexity Low_complexity 1 25 0 342 338 29 7 chr20 38885073 38885212 -33268670 - L1ME4a LINE L1 -14 6107 5966 1232 191 139 8 chr20 38885397 38885664 -33268218 + AluJo SINE Alu 1 302 0 2090 174 118 79 chr20 38886611 38887266 -33266616 - L1MC4a LINE L1 -272 7536 6857 183 80 0 0 chr20 38887580 38887605 -33266277 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 459 235 136 63 chr20 38887784 38888113 -33265769 - L1ME4a LINE L1 -747 5399 5095 2248 101 0 0 chr20 38888113 38888419 -33265463 + AluSx SINE Alu 1 306 -6 459 235 136 63 chr20 38888419 38888506 -33265376 - L1ME4a LINE L1 -1051 5095 5051 1987 151 0 0 chr20 38888506 38888818 -33265064 - AluSx SINE Alu 0 312 1 459 235 136 63 chr20 38888818 38888898 -33264984 - L1ME4a LINE L1 -1095 5051 4978 1960 148 0 3 chr20 38888975 38889280 -33264602 - AluJb SINE Alu 0 312 9 2309 76 0 0 chr20 38889329 38889647 -33264235 - AluSc SINE Alu 0 318 1 2113 92 6 32 chr20 38889779 38890094 -33263788 - AluSx SINE Alu -5 307 1 373 149 0 0 chr20 38890120 38890187 -33263695 - L1MB7 LINE L1 -7 6177 6111 1761 136 11 14 chr20 38890203 38890482 -33263400 + AluJo SINE Alu 18 295 -17 913 106 0 0 chr20 38890484 38890607 -33263275 + AluSq/x SINE Alu 3 125 -187 4143 181 36 43 chr20 38890624 38892015 -33261867 - L1MB7 LINE L1 -58 6126 4750 285 51 0 0 chr20 38892229 38892268 -33261614 + (TG)n Simple_repeat Simple_repeat 1 39 0 2121 118 0 7 chr20 38893249 38893554 -33260328 - AluSx SINE Alu -9 303 1 251 262 0 0 chr20 38893561 38893645 -33260237 - L1MC/D LINE L1 -1988 5820 5737 1565 207 126 3 chr20 38894985 38895342 -33258540 - MLT1I LTR MaLR -6 403 3 680 295 124 4 chr20 38895344 38895578 -33258304 + MIR SINE MIR 1 262 0 225 154 0 0 chr20 38895666 38895705 -33258177 + T-rich Low_complexity Low_complexity 1 39 0 639 256 6 30 chr20 38896523 38896691 -33257191 - MER117 DNA MER1_type -2 195 32 1849 114 8 0 chr20 38898149 38898411 -33255471 - AluSx SINE Alu -31 281 18 802 124 9 0 chr20 38898461 38898574 -33255308 + AluJb SINE Alu 2 115 -197 343 320 97 24 chr20 38899894 38900143 -33253739 - MIR SINE MIR -2 260 3 246 320 78 16 chr20 38900898 38901026 -33252856 + L2 LINE L2 3136 3271 -1 190 315 128 20 chr20 38902208 38902357 -33251525 - MIR SINE MIR -61 201 37 352 260 55 40 chr20 38903167 38903377 -33250505 - MIR3 SINE MIR -55 153 3 1385 179 67 14 chr20 38903504 38903789 -33250093 + AluJo SINE Alu 1 300 -12 398 263 45 0 chr20 38904841 38904974 -33248908 + L1MC4a LINE L1 5784 5922 -1886 1511 140 65 51 chr20 38904989 38905282 -33248600 + AluJo SINE Alu 1 297 -15 1806 156 10 7 chr20 38906728 38907036 -33246846 - AluJo SINE Alu -3 309 1 243 229 148 83 chr20 38907395 38907594 -33246288 - MIR SINE MIR -52 210 3 2090 116 3 7 chr20 38907696 38908006 -33245876 - AluSx SINE Alu -3 309 1 1595 170 32 0 chr20 38908166 38908443 -33245439 - AluJo SINE Alu -26 286 1 927 79 8 16 chr20 38909976 38910103 -33243779 + AluJo SINE Alu 11 136 -176 1220 173 27 9 chr20 38911189 38911409 -33242473 - MER58A DNA MER1_type 0 224 1 315 0 0 0 chr20 38911630 38911665 -33242217 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 658 242 32 16 chr20 38911670 38911856 -33242026 - L1ME1 LINE L1 -4 6162 5974 807 139 0 0 chr20 38911990 38912105 -33241777 - FLAM_C SINE Alu -18 125 11 1928 97 40 27 chr20 38914110 38914410 -33239472 + AluSx SINE Alu 1 304 -8 262 151 38 0 chr20 38914418 38914471 -33239411 - MSTC LTR MaLR -373 55 1 519 264 103 23 chr20 38914573 38914747 -33239135 + MIR SINE MIR 3 190 -72 320 94 0 38 chr20 38914808 38914861 -33239021 + MADE1 DNA Mariner 30 80 0 633 264 48 39 chr20 38915163 38915371 -33238511 + Charlie8 DNA MER1_type 58 267 -2150 370 251 186 64 chr20 38915919 38916246 -33237636 - L2 LINE L2 -33 3239 2873 704 148 74 0 chr20 38916357 38916465 -33237417 - FLAM_A SINE Alu -17 116 1 1870 153 16 0 chr20 38916539 38916846 -33237036 - AluJb SINE Alu 0 312 1 461 236 190 11 chr20 38917056 38917230 -33236652 + MIR SINE MIR 31 235 -27 204 235 78 0 chr20 38917196 38917247 -33236635 + L2 LINE L2 3206 3260 -12 * 2069 116 0 3 chr20 38918395 38918696 -33235186 - AluSx SINE Alu -12 300 1 710 194 14 0 chr20 38918761 38918900 -33234982 - L1ME3 LINE L1 -1 6161 6021 2297 198 99 78 chr20 38919020 38919075 -33234807 + L2 LINE L2 1744 1796 -1518 1314 136 43 116 chr20 38919075 38919309 -33234573 - MER33 DNA MER1_type -2261 324 121 1754 152 3 23 chr20 38919309 38919618 -33234264 - AluJo SINE Alu -5 307 5 1314 136 43 116 chr20 38919618 38919728 -33234154 - MER33 DNA MER1_type -2464 121 5 2297 198 99 78 chr20 38919728 38920028 -33233854 + L2 LINE L2 1796 2088 -1226 2235 89 7 7 chr20 38920028 38920330 -33233552 - AluSx SINE Alu -10 302 1 2297 198 99 78 chr20 38920330 38920772 -33233110 + L2 LINE L2 2088 2559 -755 376 218 69 0 chr20 38920772 38920873 -33233009 + L2 LINE L2 2689 2796 -518 1391 154 189 84 chr20 38920873 38921066 -33232816 + LTR54B LTR ERV1 1 172 -326 2309 94 0 0 chr20 38921066 38921373 -33232509 + AluSx SINE Alu 1 307 -5 1391 154 189 84 chr20 38921373 38921607 -33232275 + LTR54B LTR ERV1 172 473 -25 2032 104 0 10 chr20 38921607 38921922 -33231960 + AluSx SINE Alu 1 312 0 1273 251 104 38 chr20 38921976 38922447 -33231435 + L2 LINE L2 2807 3308 -5 2204 101 3 0 chr20 38922447 38922745 -33231137 + AluSp SINE Alu 1 299 -14 612 288 88 13 chr20 38922830 38923056 -33230826 + MIR SINE MIR 14 256 -6 186 313 96 12 chr20 38923674 38923757 -33230125 + L2 LINE L2 3197 3286 -27 1469 132 0 5 chr20 38924541 38924754 -33229128 + AluSq SINE Alu 1 212 -101 389 107 0 0 chr20 38924754 38924810 -33229072 + AluSq/x SINE Alu 78 133 -170 2151 110 24 0 chr20 38924813 38925104 -33228778 + AluSq SINE Alu 1 298 -15 186 292 0 0 chr20 38925464 38925512 -33228370 - MER5A DNA MER1_type -22 167 120 204 40 0 0 chr20 38925656 38925681 -33228201 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 681 170 0 0 chr20 38925681 38925793 -33228089 - FLAM_C SINE Alu -19 114 3 2219 127 7 0 chr20 38925805 38926105 -33227777 - AluSx SINE Alu -10 302 1 2398 165 92 103 chr20 38926561 38927348 -33226534 + L1MC4 LINE L1 7265 8042 0 226 259 281 0 chr20 38927353 38927434 -33226448 + MIR SINE MIR 20 77 -185 2581 58 0 7 chr20 38927434 38927743 -33226139 + AluY SINE Alu 1 307 -4 226 259 281 0 chr20 38927743 38927796 -33226086 + MIR SINE MIR 77 192 -70 1841 184 13 0 chr20 38927804 38928103 -33225779 + AluJo SINE Alu 1 303 -9 184 294 29 15 chr20 38928111 38928179 -33225703 - MIR SINE MIR 0 262 194 227 229 244 61 chr20 38929094 38929225 -33224657 + MIR SINE MIR 20 174 -88 2171 122 3 0 chr20 38929292 38929588 -33224294 + AluSx SINE Alu 4 300 -12 515 267 24 18 chr20 38929717 38929882 -33224000 + MIR SINE MIR 31 196 -66 260 230 65 115 chr20 38930644 38930795 -33223087 - L3 LINE CR1 -31 1546 1408 1959 176 0 0 chr20 38930795 38931096 -33222786 - AluJo SINE Alu -11 301 1 260 230 65 115 chr20 38931096 38931161 -33222721 - L3 LINE CR1 -169 1408 1341 249 304 43 26 chr20 38931781 38931896 -33221986 - MIR SINE MIR -63 145 29 1192 153 0 93 chr20 38932421 38932657 -33221225 + AluJb SINE Alu 85 298 -14 1806 183 0 19 chr20 38934146 38934458 -33219424 + AluSx SINE Alu 1 306 -6 251 279 38 82 chr20 38934926 38935030 -33218852 + MIR3 SINE MIR 9 105 -103 2555 71 0 0 chr20 38935030 38935326 -33218556 + AluSg SINE Alu 1 296 -14 251 279 38 82 chr20 38935326 38935379 -33218503 + MIR3 SINE MIR 105 159 -49 2056 142 3 0 chr20 38935397 38935685 -33218197 - AluSx SINE Alu -23 289 1 2072 141 0 3 chr20 38936031 38936335 -33217547 + AluSx SINE Alu 1 303 -9 2377 98 0 3 chr20 38936337 38936665 -33217217 + AluY SINE Alu 5 331 0 1187 171 42 5 chr20 38936693 38936910 -33216972 - AluJo SINE Alu 0 312 88 22 0 0 0 chr20 38936918 38936940 -33216942 + AT_rich Low_complexity Low_complexity 1 22 0 257 239 104 23 chr20 38937182 38937312 -33216570 + MIR SINE MIR 103 245 -17 282 252 63 40 chr20 38937320 38937446 -33216436 - MIR SINE MIR -73 135 35 967 131 0 21 chr20 38937450 38937595 -33216287 + FRAM SINE Alu 26 167 -9 27 0 0 0 chr20 38937654 38937681 -33216201 + AT_rich Low_complexity Low_complexity 1 27 0 2341 101 0 7 chr20 38937696 38938004 -33215878 + AluSx SINE Alu 1 306 -6 2075 203 53 73 chr20 38938005 38938469 -33215413 - L1ME1 LINE L1 -18 6148 5699 1683 161 17 37 chr20 38938469 38938767 -33215115 - AluJo SINE Alu -17 295 4 2075 203 53 73 chr20 38938767 38938943 -33214939 - L1ME1 LINE L1 -467 5699 5521 465 254 30 43 chr20 38939327 38939504 -33214378 + MIR SINE MIR 15 188 -61 908 135 14 7 chr20 38939513 38939654 -33214228 + FLAM_C SINE Alu 1 142 -1 375 206 10 69 chr20 38940490 38940592 -33213290 + MIR SINE MIR 77 172 -90 2403 93 3 0 chr20 38940771 38941073 -33212809 - AluSp SINE Alu -9 304 2 2334 102 7 0 chr20 38941078 38941372 -33212510 - AluSx SINE Alu -16 296 1 530 197 0 0 chr20 38941712 38941816 -33212066 + MER5A DNA MER1_type 6 109 -80 2129 148 0 0 chr20 38942218 38942516 -33211366 + AluSx SINE Alu 1 298 -14 363 367 24 6 chr20 38943225 38943394 -33210488 - MIR SINE MIR -59 203 32 215 286 68 116 chr20 38943921 38944155 -33209727 - L2 LINE L2 -12 3260 3016 2085 104 7 30 chr20 38944155 38944452 -33209430 - AluSx SINE Alu -22 290 1 1857 169 3 0 chr20 38944454 38944744 -33209138 - AluJb SINE Alu -21 291 1 215 286 68 116 chr20 38944744 38944800 -33209082 - L2 LINE L2 -257 3015 2981 267 318 40 16 chr20 38944864 38944990 -33208892 - MER5A DNA MER1_type -54 135 7 2534 90 3 0 chr20 38945582 38945894 -33207988 - AluSp SINE Alu 0 313 1 580 168 28 0 chr20 38945980 38946087 -33207795 + FLAM_C SINE Alu 2 111 -32 336 102 0 0 chr20 38946114 38946163 -33207719 + (GGGGA)n Simple_repeat Simple_repeat 5 53 0 479 262 24 25 chr20 38946215 38946365 -33207517 - MIR SINE MIR -49 159 11 2210 117 7 0 chr20 38946467 38946767 -33207115 + AluSx SINE Alu 1 302 -10 567 152 6 70 chr20 38946819 38946977 -33206905 - L1MC5 LINE L1 -168 7793 7646 362 295 108 49 chr20 38947505 38947532 -33206350 + MIR3 SINE MIR 32 56 -171 1577 126 28 126 chr20 38947532 38947662 -33206220 + AluSx SINE Alu 1 142 -170 2355 85 0 3 chr20 38947662 38947955 -33205927 + AluSx SINE Alu 10 301 -11 1577 126 28 126 chr20 38947955 38948149 -33205733 + AluSx SINE Alu 142 293 -19 362 295 108 49 chr20 38948149 38948315 -33205567 + MIR3 SINE MIR 56 224 -3 2373 95 3 3 chr20 38948387 38948693 -33205189 + AluSx SINE Alu 1 306 -6 331 301 127 12 chr20 38949292 38949465 -33204417 + L2 LINE L2 2866 3058 -214 317 290 0 0 chr20 38949617 38949686 -33204196 - L1MD3 LINE L1 0 7995 7927 1840 143 14 17 chr20 38949694 38949988 -33203894 + AluJo SINE Alu 1 293 -19 196 138 35 0 chr20 38949996 38950022 -33203860 + (TTAAA)n Simple_repeat Simple_repeat 3 27 -35 1602 173 6 77 chr20 38950022 38950207 -33203675 - AluJb SINE Alu -11 301 147 2485 68 0 0 chr20 38950207 38950500 -33203382 - AluY SINE Alu -17 294 2 1602 173 6 77 chr20 38950500 38950638 -33203244 - AluJb SINE Alu -165 147 1 196 138 35 0 chr20 38950638 38950669 -33203213 + (TTAAA)n Simple_repeat Simple_repeat 27 62 0 251 145 18 253 chr20 38950682 38950711 -33203171 - L1MC4 LINE L1 -32 8010 7976 2096 137 0 7 chr20 38950711 38951018 -33202864 + AluJb SINE Alu 1 305 -7 251 145 18 253 chr20 38951018 38951209 -33202673 - L1MC4 LINE L1 -66 7976 7842 347 306 65 0 chr20 38951261 38951385 -33202497 + L2 LINE L2 3134 3265 -7 2324 117 0 0 chr20 38951629 38951936 -33201946 - AluSq SINE Alu -6 307 1 712 216 78 6 chr20 38952302 38952469 -33201413 + MER5A DNA MER1_type 1 179 -10 2084 122 23 0 chr20 38952953 38953256 -33200626 - AluSq SINE Alu -1 312 3 398 262 79 61 chr20 38953502 38953629 -33200253 - L1MC4a LINE L1 -1860 5948 5814 1896 132 46 26 chr20 38953629 38953933 -33199949 - AluSx SINE Alu -2 310 1 398 262 79 61 chr20 38953933 38954034 -33199848 - L1MC4a LINE L1 -1994 5814 5716 192 328 15 0 chr20 38954039 38954106 -33199776 - MIR SINE MIR -62 146 79 476 255 35 76 chr20 38954305 38954450 -33199432 + L2 LINE L2 3134 3272 0 331 369 134 0 chr20 38954469 38954656 -33199226 + MIR SINE MIR 14 225 -37 208 170 43 0 chr20 38954747 38954794 -33199088 - L2 LINE L2 -229 3043 2995 216 338 38 68 chr20 38955262 38955395 -33198487 + L2 LINE L2 3026 3154 -118 215 244 0 0 chr20 38955422 38955463 -33198419 + L2 LINE L2 3268 3308 -5 2284 121 3 0 chr20 38956468 38956774 -33197108 - AluSg SINE Alu -3 307 1 293 73 0 0 chr20 38956851 38956892 -33196990 + MADE1 DNA Mariner 1 41 -39 269 261 14 0 chr20 38957022 38957091 -33196791 - MLT1G LTR MaLR -305 285 216 238 222 0 0 chr20 38957117 38957171 -33196711 - MLT1F1 LTR MaLR -403 192 139 1971 165 0 13 chr20 38957268 38957619 -33196263 + AluJb SINE Alu 1 347 0 186 43 0 0 chr20 38957614 38957637 -33196245 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 188 392 8 17 chr20 38957638 38957758 -33196124 - L2 LINE L2 -237 3035 2917 374 279 188 7 chr20 38957962 38958116 -33195766 + MIR SINE MIR 81 262 0 2207 163 40 71 chr20 38958453 38958752 -33195130 - MLT1C LTR MaLR 0 467 187 936 168 0 0 chr20 38958752 38958907 -33194975 - FRAM SINE Alu -8 158 4 2207 163 40 71 chr20 38958907 38959087 -33194795 - MLT1C LTR MaLR -280 187 3 2017 153 0 10 chr20 38959284 38959579 -33194303 - AluSx SINE Alu -12 300 9 292 336 86 0 chr20 38959759 38959875 -33194007 + L2 LINE L2 3147 3272 0 2213 223 50 0 chr20 38960045 38960561 -33193321 - MLT1F LTR MaLR 0 542 1 560 225 39 8 chr20 38960680 38960809 -33193073 + L2 LINE L2 3136 3268 -4 2642 58 0 3 chr20 38961140 38961449 -33192433 - AluSx SINE Alu -4 308 1 282 195 232 49 chr20 38962051 38962215 -33191667 + MIR SINE MIR 21 214 -48 2284 104 6 22 chr20 38962498 38962815 -33191067 - AluSx SINE Alu 0 312 1 585 202 0 8 chr20 38962847 38962966 -33190916 - FLAM_C SINE Alu -15 118 1 4277 146 142 88 chr20 38963237 38963662 -33190220 - L1MC3 LINE L1 -8 7777 7377 2349 135 3 3 chr20 38963662 38964026 -33189856 + THE1B LTR MaLR 1 364 0 4277 146 142 88 chr20 38964026 38964192 -33189690 - L1MC3 LINE L1 -408 7377 7222 241 257 27 0 chr20 38964192 38964266 -33189616 - MLT1F1 LTR MaLR -456 111 36 4277 146 142 88 chr20 38964266 38964363 -33189519 - L1MC3 LINE L1 -563 7222 7132 2065 108 7 46 chr20 38964363 38964670 -33189212 - AluSx SINE Alu -17 295 1 4277 146 142 88 chr20 38964670 38964808 -33189074 - L1MC3 LINE L1 -653 7132 7003 195 42 0 0 chr20 38964808 38964832 -33189050 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 4277 146 142 88 chr20 38964832 38965138 -33188744 - L1MC3 LINE L1 -782 7003 6503 4052 79 6 2 chr20 38965139 38965660 -33188222 - MER1A DNA MER1_type -2 527 5 1870 145 36 6 chr20 38965664 38966001 -33187881 - L1MC3 LINE L1 -1274 6511 6165 695 175 0 0 chr20 38966022 38966136 -33187746 - FLAM_C SINE Alu -22 121 8 525 176 16 24 chr20 38966143 38966268 -33187614 - L1MC3 LINE L1 -1619 6166 6043 1077 235 165 9 chr20 38966310 38966940 -33186942 + L2 LINE L2 2503 3313 0 649 229 17 72 chr20 38967400 38967636 -33186246 + MER112 DNA MER1_type 33 255 -5 499 277 99 20 chr20 38967636 38967838 -33186044 + MIR SINE MIR 10 227 -35 885 168 103 0 chr20 38968115 38968300 -33185582 - MER3 DNA MER1_type 0 209 6 643 303 4 13 chr20 38968609 38968837 -33185045 - L1ME LINE L1 -334 5787 5562 895 314 73 30 chr20 38969204 38969644 -33184238 + MARNA DNA Mariner 110 568 -18 2476 68 0 7 chr20 38969703 38969997 -33183885 - AluSq SINE Alu -17 296 5 328 203 38 0 chr20 38970029 38970108 -33183774 - Charlie5 DNA MER1_type -27 2585 2504 887 156 0 35 chr20 38970115 38970276 -33183606 + FRAM SINE Alu 20 176 0 2774 103 55 30 chr20 38970290 38970796 -33183086 - L1MB4 LINE L1 -6 6174 5656 1604 163 37 50 chr20 38970798 38971098 -33182784 - AluJb SINE Alu -16 296 1 1897 127 11 4 chr20 38971159 38971427 -33182455 - AluJo SINE Alu -34 278 9 838 176 59 14 chr20 38971428 38971636 -33182246 - MER33 DNA MER1_type -250 74 1 385 358 18 22 chr20 38971782 38972008 -33181874 - L2 LINE L2 -220 3052 2828 659 224 260 22 chr20 38972030 38972645 -33181237 + L2 LINE L2 2549 3311 -2 251 269 34 17 chr20 38972758 38972877 -33181005 - L1MC4 LINE L1 -2 8040 7920 2068 113 25 0 chr20 38972917 38973192 -33180690 + AluSx SINE Alu 1 282 -30 1021 129 45 0 chr20 38973037 38973192 -33180690 + AluSg/x SINE Alu 119 310 0 271 0 0 0 chr20 38973192 38973222 -33180660 + (TAAA)n Simple_repeat Simple_repeat 4 108 0 396 316 122 60 chr20 38973646 38974080 -33179802 - L2 LINE L2 0 3272 2812 541 295 38 16 chr20 38974201 38974521 -33179361 - L1MC5 LINE L1 -393 7415 7247 1210 253 83 69 chr20 38974528 38974970 -33178912 - L1MC4 LINE L1 -727 7234 6800 1778 168 10 0 chr20 38974970 38975267 -33178615 - AluJb SINE Alu -12 300 1 1210 253 83 69 chr20 38975267 38975625 -33178257 - L1MC4 LINE L1 -1161 6800 6448 2215 191 157 2 chr20 38975625 38976108 -33177774 - MER68 LTR ERV1 -4 558 1 1210 253 83 69 chr20 38976108 38976678 -33177204 - L1MC4 LINE L1 -1513 6448 5843 437 289 72 63 chr20 38976770 38977088 -33176794 - L2 LINE L2 -914 2400 2080 357 231 149 8 chr20 38978737 38978858 -33175024 + MER117 DNA MER1_type 4 141 -56 480 204 96 64 chr20 38978908 38979016 -33174866 - MER5B DNA MER1_type 0 178 62 1904 134 10 16 chr20 38979016 38979322 -33174560 - AluJb SINE Alu -8 304 1 480 204 96 64 chr20 38979322 38979370 -33174512 - MER5B DNA MER1_type -116 62 17 2057 117 3 0 chr20 38979550 38979841 -33174041 + AluSx SINE Alu 19 310 -2 403 261 148 30 chr20 38981067 38981297 -33172585 - MLT1K LTR MaLR -2 586 330 2177 90 6 34 chr20 38983521 38983843 -33170039 - AluSp SINE Alu 0 313 1 203 367 76 43 chr20 38983852 38984220 -33169662 - L2 LINE L2 -607 2707 2328 314 331 182 6 chr20 38984513 38984694 -33169188 + MIR SINE MIR 49 261 -1 1036 201 0 0 chr20 38984697 38984866 -33169016 - FAM SINE Alu -6 169 1 234 62 0 0 chr20 38985053 38985085 -33168797 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2262 65 24 0 chr20 38985153 38985445 -33168437 + AluY SINE Alu 1 299 -12 2039 120 3 3 chr20 38985479 38985770 -33168112 + AluSq SINE Alu 1 291 -22 191 236 179 28 chr20 38986315 38986421 -33167461 - L2 LINE L2 -941 2373 2252 180 0 0 0 chr20 38986602 38986622 -33167260 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 599 213 188 20 chr20 38987173 38987375 -33166507 - Charlie8 DNA MER1_type -2181 236 1 464 289 63 26 chr20 38987949 38988139 -33165743 - MIR SINE MIR -26 236 40 217 299 39 13 chr20 38989792 38989869 -33164013 - MIR3 SINE MIR -17 191 113 316 322 74 43 chr20 38990116 38990374 -33163508 - L2 LINE L2 -16 3256 2991 452 274 115 29 chr20 38990606 38990814 -33163068 + L2 LINE L2 1996 2221 -1093 1372 155 133 52 chr20 38990814 38990854 -33163028 - MLT2B1 LTR ERVL -8 507 472 2215 99 0 0 chr20 38990854 38991147 -33162735 - AluSx SINE Alu -18 294 2 1372 155 133 52 chr20 38991147 38991530 -33162352 - MLT2B1 LTR ERVL -43 472 1 556 240 123 28 chr20 38991530 38991709 -33162173 + L2 LINE L2 2213 2408 -906 4870 155 31 61 chr20 38991718 38991906 -33161976 - L1MA9 LINE L1 -25 6287 6095 1070 179 11 139 chr20 38991906 38992179 -33161703 - MER8 DNA MER2_type 0 239 2 4870 155 31 61 chr20 38992179 38992452 -33161430 - L1MA9 LINE L1 -217 6095 5815 2158 103 30 0 chr20 38992452 38992753 -33161129 - AluSg SINE Alu 0 310 1 2368 81 0 0 chr20 38992763 38993071 -33160811 - AluY SINE Alu -3 308 1 4870 155 31 61 chr20 38993071 38993844 -33160038 - L1MA9 LINE L1 -506 5806 5012 707 152 7 90 chr20 38993844 38993989 -33159893 + AluJo SINE Alu 1 133 -169 4870 155 31 61 chr20 38993989 38994173 -33159709 - L1MA9 LINE L1 -1300 5012 4824 1708 161 38 0 chr20 38994173 38994464 -33159418 - AluJo SINE Alu -10 302 1 4870 155 31 61 chr20 38994464 38994899 -33158983 - L1MA9 LINE L1 -1488 4824 4478 975 218 224 8 chr20 38994900 38995271 -33158611 + L2 LINE L2 2424 2874 -440 704 148 0 33 chr20 38995349 38995471 -33158411 - L1MB5 LINE L1 0 6174 6057 1765 170 0 0 chr20 38995479 38995768 -33158114 - AluJo SINE Alu -23 289 1 923 171 27 132 chr20 38995769 38995798 -33158084 + L1ME2 LINE L1 5557 5587 -577 1748 74 4 0 chr20 38995798 38996028 -33157854 + L1PA14 LINE L1 5928 6158 -3 923 171 27 132 chr20 38996028 38996291 -33157591 + L1ME2 LINE L1 5587 5813 -351 1066 173 0 12 chr20 38996291 38996459 -33157423 + AluJo SINE Alu 137 302 0 923 171 27 132 chr20 38996459 38996498 -33157384 + L1ME2 LINE L1 5813 5854 -310 1922 121 5 88 chr20 38996500 38996766 -33157116 + MER47A DNA MER2_type 25 312 -2011 1265 192 84 34 chr20 38996766 38997063 -33156819 - AluJo SINE Alu 0 312 1 1922 121 5 88 chr20 38997063 38997081 -33156801 + MER47A DNA MER2_type 312 330 -1993 1573 112 100 4 chr20 38997081 38997340 -33156542 - L1MA3 LINE L1 -7 6298 6015 1922 121 5 88 chr20 38997340 38997427 -33156455 + MER47A DNA MER2_type 330 366 0 699 220 125 78 chr20 38997429 38997564 -33156318 + L1ME2 LINE L1 5905 6057 -107 1727 172 7 3 chr20 38997564 38997860 -33156022 - AluJb SINE Alu -7 305 9 699 220 125 78 chr20 38997860 38997956 -33155926 + L1ME2 LINE L1 6057 6147 -17 566 121 66 0 chr20 38997977 38998068 -33155814 + FLAM_A SINE Alu 43 139 -3 366 315 122 11 chr20 38998069 38998250 -33155632 - MIR SINE MIR -14 248 48 2315 65 10 0 chr20 38998256 38998564 -33155318 + AluY SINE Alu 1 311 0 372 279 10 4 chr20 38998620 38998739 -33155143 - MIR SINE MIR -66 142 40 1789 146 0 35 chr20 38999461 38999776 -33154106 + AluJo SINE Alu 1 304 -8 181 283 67 17 chr20 38999993 39000053 -33153829 - MIR3 SINE MIR -28 180 118 189 340 40 20 chr20 39000193 39000293 -33153589 + MIR3 SINE MIR 107 208 0 285 256 97 97 chr20 39000415 39000653 -33153229 - L2 LINE L2 -9 3263 3026 183 250 0 0 chr20 39000711 39000759 -33153123 + MIR SINE MIR 85 132 -76 1871 129 10 26 chr20 39001153 39001455 -33152427 - AluSx SINE Alu -13 299 3 380 263 134 28 chr20 39001856 39001943 -33151939 + MIR SINE MIR 65 141 -121 1232 161 52 26 chr20 39001943 39002173 -33151709 + MER46A DNA MER2_type 1 236 0 380 263 134 28 chr20 39002173 39002264 -33151618 + MIR SINE MIR 141 262 0 687 292 98 8 chr20 39002272 39002649 -33151233 + L2 LINE L2 2299 2709 -605 858 103 8 0 chr20 39002653 39002779 -33151103 + FLAM_C SINE Alu 11 137 -6 980 147 0 0 chr20 39003012 39003162 -33150720 - FRAM SINE Alu -4 172 23 888 151 14 0 chr20 39003229 39003375 -33150507 + FRAM SINE Alu 22 169 -7 223 348 0 0 chr20 39003530 39003599 -33150283 + L2 LINE L2 3142 3210 -62 217 146 0 0 chr20 39003659 39003700 -33150182 + MIR SINE MIR 80 120 -142 2092 97 3 19 chr20 39004805 39005113 -33148769 - AluSx SINE Alu -9 303 1 822 184 32 0 chr20 39005259 39005417 -33148465 - AluJb SINE Alu -11 301 139 356 279 157 7 chr20 39005652 39005799 -33148083 + LTR16C LTR ERVL 323 491 0 1338 127 111 94 chr20 39006293 39006600 -33147282 + AluJo SINE Alu 1 312 0 648 122 24 8 chr20 39006605 39006728 -33147154 + GA-rich Low_complexity Low_complexity 1 125 0 927 179 0 12 chr20 39006731 39006904 -33146978 + FRAM SINE Alu 1 170 -6 2236 107 7 0 chr20 39006968 39007277 -33146605 + AluSq SINE Alu 3 313 0 1082 156 6 0 chr20 39007494 39007667 -33146215 + AluJb SINE Alu 134 307 -5 405 216 155 7 chr20 39007787 39007935 -33145947 - MIR SINE MIR -79 183 14 257 322 35 17 chr20 39008122 39008237 -33145645 - MIR SINE MIR -58 150 34 222 165 55 121 chr20 39008299 39008390 -33145492 + L2 LINE L2 3169 3253 -19 1890 138 10 7 chr20 39009081 39009379 -33144503 - AluJo SINE Alu -12 300 2 215 324 120 14 chr20 39009497 39009639 -33144243 - MIR SINE MIR 0 262 106 379 320 20 7 chr20 39009904 39010051 -33143831 + MIR3 SINE MIR 44 192 -16 1989 140 96 117 chr20 39010151 39010281 -33143601 - L1MC3 LINE L1 -96 7689 7558 2116 122 0 0 chr20 39010281 39010584 -33143298 - AluSx SINE Alu -8 304 2 1989 140 96 117 chr20 39010584 39010721 -33143161 - L1MC3 LINE L1 -227 7558 7420 2248 110 0 0 chr20 39010721 39011030 -33142852 - AluSc SINE Alu 0 309 1 1754 152 3 32 chr20 39011030 39011339 -33142543 - AluJb SINE Alu -12 300 1 1989 140 96 117 chr20 39011339 39011589 -33142293 - L1MC3 LINE L1 -363 7422 7181 293 271 83 0 chr20 39011590 39011686 -33142196 - MLT1F1 LTR MaLR -451 116 13 2368 85 0 0 chr20 39011938 39012243 -33141639 - AluSx SINE Alu -7 305 1 389 259 120 32 chr20 39012259 39012417 -33141465 + MIR SINE MIR 45 216 -46 225 254 0 0 chr20 39012703 39012758 -33141124 + MIR SINE MIR 68 122 -86 421 143 205 148 chr20 39013051 39013138 -33140744 - L1MC1 LINE L1 -113 7659 7578 1575 137 35 28 chr20 39013138 39013423 -33140459 - AluJb SINE Alu -25 287 1 421 143 205 148 chr20 39013423 39013559 -33140323 - L1MC1 LINE L1 -194 7578 6145 1828 150 0 36 chr20 39014104 39014411 -33139471 - AluJo SINE Alu -16 296 1 374 247 12 0 chr20 39014559 39014644 -33139238 + L2 LINE L2 3209 3294 -19 240 219 104 14 chr20 39014658 39014799 -33139083 - L2 LINE L2 -263 3009 2858 364 259 120 0 chr20 39015582 39015690 -33138192 - MIR SINE MIR -61 147 27 307 331 45 28 chr20 39015759 39015937 -33137945 - L2 LINE L2 -167 3105 2925 300 315 176 0 chr20 39016163 39016328 -33137554 - MIR SINE MIR -63 199 6 957 266 10 0 chr20 39016380 39016587 -33137295 + MER63A DNA MER1_type 2 210 0 249 304 111 22 chr20 39016897 39017032 -33136850 - MIR SINE MIR -77 185 39 223 154 26 0 chr20 39017160 39017199 -33136683 + MIR SINE MIR 108 147 -61 310 276 59 40 chr20 39017673 39017825 -33136057 + MIR SINE MIR 108 262 0 180 0 0 0 chr20 39018139 39018159 -33135723 + (TCC)n Simple_repeat Simple_repeat 1 20 0 300 292 17 0 chr20 39018228 39018348 -33135534 + (CCCG)n Simple_repeat Simple_repeat 2 123 0 21 36 0 0 chr20 39018697 39018725 -33135157 + GC_rich Low_complexity Low_complexity 1 28 0 190 247 45 56 chr20 39019002 39019091 -33134791 + MIR SINE MIR 49 136 -126 185 227 0 23 chr20 39019524 39019568 -33134314 + L2 LINE L2 3266 3308 -5 282 337 11 0 chr20 39019667 39019759 -33134123 + MIR SINE MIR 64 156 -106 434 255 17 46 chr20 39019780 39019933 -33133949 - MIR SINE MIR -62 146 17 423 284 24 50 chr20 39020875 39021132 -33132750 - L2 LINE L2 -256 3016 2768 374 312 134 10 chr20 39021457 39021659 -33132223 + MIR SINE MIR 24 250 -12 330 356 9 0 chr20 39021956 39022071 -33131811 - MIR SINE MIR -63 145 30 686 209 7 0 chr20 39022833 39022972 -33130910 + MER117 DNA MER1_type 58 197 0 229 341 182 8 chr20 39022972 39023104 -33130778 - MIR3 SINE MIR -48 160 6 189 241 66 80 chr20 39023124 39023261 -33130621 + MIR3 SINE MIR 1 135 -73 302 188 31 0 chr20 39023319 39023383 -33130499 + MIR SINE MIR 81 146 -62 301 270 117 0 chr20 39023804 39023915 -33129967 - MIR SINE MIR -109 153 30 586 318 64 26 chr20 39024099 39024332 -33129550 + MIR SINE MIR 5 246 -16 300 246 0 0 chr20 39025393 39025458 -33128424 - MIR SINE MIR -63 145 81 277 311 219 0 chr20 39025659 39025778 -33128104 - MIR SINE MIR -71 191 47 721 229 32 19 chr20 39025891 39026111 -33127771 + MIR SINE MIR 36 262 0 201 331 105 15 chr20 39026071 39026204 -33127678 - MIR SINE MIR -34 228 84 * 226 222 0 19 chr20 39026245 39026299 -33127583 - MIR SINE MIR -68 140 88 535 346 24 5 chr20 39026316 39026521 -33127361 + MIR SINE MIR 46 254 -8 245 305 73 33 chr20 39026844 39026995 -33126887 + MIR SINE MIR 67 223 -39 345 327 121 27 chr20 39027650 39027947 -33125935 - L2 LINE L2 -109 3163 2839 183 276 35 0 chr20 39028195 39028253 -33125629 - L2 LINE L2 -218 3054 2995 495 265 114 12 chr20 39028892 39029058 -33124824 + MIR SINE MIR 29 211 -51 261 0 0 0 chr20 39029462 39029491 -33124391 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 260 298 57 44 chr20 39029647 39029805 -33124077 - L2 LINE L2 -128 3144 2985 514 233 99 16 chr20 39029819 39030193 -33123689 - L2 LINE L2 -254 3059 2641 227 362 60 9 chr20 39030184 39030300 -33123582 + MIR SINE MIR 141 262 0 * 181 370 34 8 chr20 39030464 39030583 -33123299 - MIR SINE MIR -119 143 22 776 251 181 35 chr20 39031296 39031903 -33121979 - L2 LINE L2 -1 3312 2606 466 272 47 39 chr20 39032025 39032257 -33121625 - L1MC5 LINE L1 -83 7878 7645 1804 131 10 45 chr20 39032269 39032581 -33121301 - AluJo SINE Alu -1 311 11 332 306 129 8 chr20 39032656 39032780 -33121102 + MIR SINE MIR 110 248 -14 956 265 9 0 chr20 39032805 39033028 -33120854 - MIR SINE MIR -2 260 36 1671 171 9 29 chr20 39034101 39034417 -33119465 - AluJo SINE Alu -2 310 1 215 300 29 0 chr20 39034607 39034677 -33119205 + MIR SINE MIR 78 149 -59 209 214 0 0 chr20 39034940 39034982 -33118900 - MIR SINE MIR -104 158 117 222 299 153 6 chr20 39035027 39035184 -33118698 + L2 LINE L2 2920 3099 -173 313 217 0 0 chr20 39035895 39035955 -33117927 + MIR SINE MIR 84 143 -119 505 271 88 24 chr20 39036259 39036429 -33117453 + MIR SINE MIR 22 202 -60 209 319 14 0 chr20 39036648 39036717 -33117165 + MIR SINE MIR 76 145 -63 275 385 30 12 chr20 39036895 39037061 -33116821 + L2 LINE L2 2917 3085 -187 642 279 51 28 chr20 39037128 39037343 -33116539 - MIR SINE MIR -3 259 40 468 0 0 0 chr20 39037376 39037428 -33116454 + (CA)n Simple_repeat Simple_repeat 2 53 0 1750 170 10 3 chr20 39037646 39037940 -33115942 - AluJo SINE Alu -16 296 1 686 271 164 26 chr20 39037944 39038401 -33115481 - L1MC4a LINE L1 -1870 5938 5419 7888 181 65 54 chr20 39038414 39039146 -33114736 - L1MB8 LINE L1 -7 6171 5449 1621 152 86 24 chr20 39039146 39039436 -33114446 - AluJo SINE Alu -4 308 1 7888 181 65 54 chr20 39039436 39039568 -33114314 - L1MB8 LINE L1 -729 5449 5320 795 197 0 0 chr20 39039568 39039695 -33114187 - FLAM_A SINE Alu -6 127 1 1623 178 20 10 chr20 39039699 39039991 -33113891 - AluJo SINE Alu -8 304 10 7888 181 65 54 chr20 39039991 39040192 -33113690 - L1MB8 LINE L1 -860 5318 5121 2269 107 0 0 chr20 39040192 39040502 -33113380 + AluSx SINE Alu 1 310 -2 7888 181 65 54 chr20 39040502 39040597 -33113285 - L1MB8 LINE L1 -1057 5121 5029 2760 10 0 0 chr20 39040597 39040907 -33112975 - AluYa8 SINE Alu 0 310 1 7888 181 65 54 chr20 39040907 39041844 -33112038 - L1MB8 LINE L1 -1149 5029 4104 2177 125 0 3 chr20 39041844 39042156 -33111726 - AluSx SINE Alu -1 311 1 7888 181 65 54 chr20 39042156 39042349 -33111533 - L1MB8 LINE L1 -2074 4104 3915 2160 107 0 0 chr20 39042349 39042640 -33111242 + AluSx SINE Alu 1 291 -21 7888 181 65 54 chr20 39042640 39043032 -33110850 - L1MB8 LINE L1 -2263 3915 3529 2213 101 3 19 chr20 39043032 39043350 -33110532 - AluSq SINE Alu 0 313 1 7888 181 65 54 chr20 39043350 39043747 -33110135 - L1MB8 LINE L1 -2649 3529 3138 2146 116 10 7 chr20 39043747 39044057 -33109825 - AluSq SINE Alu -2 311 1 1453 144 76 43 chr20 39044059 39044336 -33109546 - AluJb SINE Alu -18 294 9 7888 181 65 54 chr20 39044336 39044721 -33109161 - L1MB8 LINE L1 -3040 3138 2661 375 197 51 7 chr20 39044724 39044864 -33109018 - L1MC4a LINE L1 -720 5436 5287 404 336 41 33 chr20 39044876 39045190 -33108692 - L1MCa LINE L1 -1339 6983 1995 363 315 0 22 chr20 39045112 39045204 -33108678 + L1MC4 LINE L1 6614 6703 -1339 * 345 352 0 0 chr20 39045199 39045287 -33108595 - L1MC4 LINE L1 -1340 6702 6615 * 256 233 0 23 chr20 39045300 39045386 -33108496 + (CA)n Simple_repeat Simple_repeat 2 85 0 364 279 35 0 chr20 39045386 39045472 -33108410 - L1MC4 LINE L1 -1339 6703 6615 304 156 13 104 chr20 39045454 39045531 -33108351 - L1MCa LINE L1 -4362 2064 1995 * 862 148 8 0 chr20 39045538 39045666 -33108216 - AluJb SINE Alu -183 129 1 456 325 63 20 chr20 39045672 39046138 -33107744 - L1MC4a LINE L1 -1102 5044 4554 2191 105 0 0 chr20 39046138 39046434 -33107448 - AluSg SINE Alu -14 296 1 456 325 63 20 chr20 39046434 39046459 -33107423 - L1MC4a LINE L1 -1592 4554 4532 550 297 57 52 chr20 39046460 39046626 -33107256 - L1MC4a LINE L1 -1776 4370 4201 2134 134 0 0 chr20 39046626 39046931 -33106951 - AluSx SINE Alu -7 305 1 550 297 57 52 chr20 39046931 39046976 -33106906 - L1MC4a LINE L1 -1945 4201 4158 2338 104 0 0 chr20 39046979 39047287 -33106595 - AluSx SINE Alu -4 308 1 1810 169 0 19 chr20 39047287 39047594 -33106288 - AluJb SINE Alu -11 301 1 754 199 0 7 chr20 39047595 39047731 -33106151 - AluJb SINE Alu -177 135 1 2106 169 21 21 chr20 39047792 39048164 -33105718 - MLT1A2 LTR MaLR 0 374 3 314 239 300 22 chr20 39048368 39048548 -33105334 - MIR SINE MIR 0 262 33 2109 112 3 0 chr20 39048572 39048859 -33105023 - AluSq SINE Alu -25 288 1 565 280 36 18 chr20 39049036 39049204 -33104678 + MIR SINE MIR 58 228 -34 457 258 98 0 chr20 39049339 39049471 -33104411 - MIR SINE MIR -110 152 8 1243 99 26 0 chr20 39049940 39050131 -33103751 - L1MA3 LINE L1 0 6305 6110 253 148 19 0 chr20 39050131 39050185 -33103697 - Alu SINE Alu -3 299 245 1327 121 97 0 chr20 39050207 39050413 -33103469 - AluJo SINE Alu 0 312 87 372 299 51 8 chr20 39050445 39050562 -33103320 - MIR SINE MIR -24 238 117 319 345 53 12 chr20 39050584 39050755 -33103127 - L1MC4a LINE L1 -1910 5898 5721 242 295 0 0 chr20 39050965 39051026 -33102856 + L2 LINE L2 3209 3269 -3 1597 110 4 0 chr20 39051575 39051803 -33102079 + AluSg/x SINE Alu 76 304 -6 1277 112 0 0 chr20 39051803 39051982 -33101900 + AluSg/x SINE Alu 132 310 0 312 91 0 0 chr20 39051999 39052043 -33101839 + (A)n Simple_repeat Simple_repeat 1 44 0 251 220 0 0 chr20 39052140 39052190 -33101692 + MIR SINE MIR 110 159 -103 601 337 6 0 chr20 39052413 39052585 -33101297 + MIR SINE MIR 80 252 -10 216 359 13 0 chr20 39052675 39052753 -33101129 - L2 LINE L2 -1 3312 3234 337 276 8 79 chr20 39052839 39052966 -33100916 + L1ME4a LINE L1 5974 6091 -30 272 303 272 10 chr20 39052968 39053163 -33100719 - MIR SINE MIR -1 261 16 365 247 142 12 chr20 39053401 39053563 -33100319 - L3 LINE CR1 -24 1553 1371 26 0 0 0 chr20 39053565 39053591 -33100291 + AT_rich Low_complexity Low_complexity 1 26 0 196 350 21 21 chr20 39053973 39054113 -33099769 - MIR3 SINE MIR -21 187 48 616 207 40 33 chr20 39054323 39054473 -33099409 - MIR SINE MIR -108 154 4 457 299 49 0 chr20 39054629 39054773 -33099109 - MIR SINE MIR -78 184 34 611 309 111 33 chr20 39055067 39055400 -33098482 - L2 LINE L2 0 3272 2914 255 207 195 0 chr20 39055495 39055577 -33098305 - L2 LINE L2 -4 3268 3171 259 300 50 12 chr20 39055675 39055755 -33098127 - MIR SINE MIR -89 173 91 2085 109 0 13 chr20 39055779 39056092 -33097790 - AluSx SINE Alu -3 309 1 232 286 83 24 chr20 39057394 39057478 -33096404 - L2 LINE L2 0 3272 3184 205 235 0 0 chr20 39057744 39057795 -33096087 - L2 LINE L2 -1 3312 3262 202 283 0 0 chr20 39058447 39058507 -33095375 + CT-rich Low_complexity Low_complexity 2 61 0 330 357 21 0 chr20 39059222 39059365 -33094517 + L2 LINE L2 2900 3045 -268 575 207 5 0 chr20 39059471 39059603 -33094279 - MIR SINE MIR -62 146 15 258 284 115 54 chr20 39059690 39059838 -33094044 + L2 LINE L2 3116 3272 0 796 214 20 11 chr20 39059856 39060080 -33093802 - MIR SINE MIR -9 253 30 2054 112 3 7 chr20 39060520 39060814 -33093068 + AluJo SINE Alu 1 293 -19 333 327 36 0 chr20 39061800 39061910 -33091972 - MIR SINE MIR -72 136 23 236 191 0 0 chr20 39062096 39062138 -33091744 - MIR SINE MIR -109 153 112 416 271 0 34 chr20 39062205 39062323 -33091559 - MIR SINE MIR -92 170 57 2090 116 3 26 chr20 39062445 39062755 -33091127 - AluSx SINE Alu -3 309 7 301 296 24 24 chr20 39062803 39062928 -33090954 - MIR SINE MIR -125 137 13 436 313 15 0 chr20 39063400 39063531 -33090351 + MIR3 SINE MIR 38 170 -38 292 169 0 31 chr20 39063554 39063619 -33090263 + MIR SINE MIR 78 140 -68 2342 92 0 0 chr20 39063628 39063933 -33089949 + AluSx SINE Alu 1 305 -7 212 222 37 0 chr20 39063957 39064011 -33089871 + MIR SINE MIR 81 136 -72 309 139 23 116 chr20 39064695 39064781 -33089101 + MIR SINE MIR 77 155 -53 234 277 36 0 chr20 39064912 39065024 -33088858 + CT-rich Low_complexity Low_complexity 2 117 0 287 258 62 0 chr20 39065222 39065319 -33088563 + MIR3 SINE MIR 66 168 -40 221 327 139 64 chr20 39065478 39065744 -33088138 - L3 LINE CR1 -13 1564 1279 215 319 123 14 chr20 39066382 39066520 -33087362 - L2 LINE L2 -248 3024 2872 183 244 22 0 chr20 39066539 39066584 -33087298 + MIR SINE MIR 103 148 -114 234 256 12 12 chr20 39066938 39067020 -33086862 + (TG)n Simple_repeat Simple_repeat 1 82 0 319 289 35 8 chr20 39067185 39067331 -33086551 + MIR SINE MIR 2 131 -77 425 282 179 0 chr20 39067813 39067969 -33085913 - MIR SINE MIR -8 254 71 409 281 16 23 chr20 39068467 39068595 -33085287 + CT-rich Low_complexity Low_complexity 4 130 0 380 317 145 20 chr20 39069084 39069480 -33084402 + L2 LINE L2 2727 3176 -96 201 283 28 97 chr20 39070094 39070239 -33083643 + MIR SINE MIR 27 161 -101 629 279 93 13 chr20 39071132 39071358 -33082524 - MIR SINE MIR 0 262 19 2148 118 0 3 chr20 39071605 39071902 -33081980 - AluSx SINE Alu -16 296 1 414 353 12 18 chr20 39071951 39072118 -33081764 - MIR SINE MIR -72 190 25 1612 158 16 0 chr20 39072474 39072727 -33081155 - AluJo SINE Alu -44 268 12 1161 206 134 18 chr20 39072767 39073035 -33080847 - L1ME1 LINE L1 -5 6161 5833 1794 161 0 37 chr20 39073035 39073359 -33080523 - AluJo SINE Alu 0 312 1 1161 206 134 18 chr20 39073359 39073478 -33080404 - L1ME1 LINE L1 -333 5833 5729 349 260 89 24 chr20 39074031 39074154 -33079728 - MIR SINE MIR -24 238 108 202 223 48 47 chr20 39074675 39074765 -33079117 + MIR SINE MIR 86 137 -71 297 170 178 42 chr20 39074956 39075054 -33078828 + MIR3 SINE MIR 44 155 -53 386 288 50 7 chr20 39076049 39076188 -33077694 - MIR3 SINE MIR -21 187 43 196 323 122 49 chr20 39076346 39076510 -33077372 + L3 LINE CR1 1313 1488 -89 203 191 225 11 chr20 39076803 39076892 -33076990 + MIR SINE MIR 33 140 -68 213 121 0 0 chr20 39076931 39076964 -33076918 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 75 0 0 chr20 39078203 39078243 -33075639 + (TG)n Simple_repeat Simple_repeat 2 41 0 603 163 42 58 chr20 39078965 39079142 -33074740 - L1PB3 LINE L1 0 6156 5990 279 298 8 41 chr20 39079142 39079193 -33074689 + CT-rich Low_complexity Low_complexity 2 53 -65 1509 153 46 18 chr20 39079193 39079474 -33074408 - AluJo SINE Alu -23 289 1 279 298 8 41 chr20 39079474 39079543 -33074339 + CT-rich Low_complexity Low_complexity 53 118 0 338 329 25 41 chr20 39079551 39079794 -33074088 + L2 LINE L2 2823 3061 -211 206 148 74 0 chr20 39080407 39080461 -33073421 + (TG)n Simple_repeat Simple_repeat 2 59 0 360 164 0 0 chr20 39080592 39080659 -33073223 + (CA)n Simple_repeat Simple_repeat 1 67 0 223 302 0 0 chr20 39081182 39081245 -33072637 + (TG)n Simple_repeat Simple_repeat 1 63 0 2152 114 0 16 chr20 39081649 39081956 -33071926 - AluSc SINE Alu -7 302 1 827 175 100 0 chr20 39082110 39082310 -33071572 + ORSL DNA AcHobo 9 228 -47 204 125 0 0 chr20 39082470 39082502 -33071380 + (TG)n Simple_repeat Simple_repeat 1 32 0 2071 135 0 6 chr20 39082556 39082868 -33071014 - AluJb SINE Alu -2 310 1 198 0 0 0 chr20 39082919 39082941 -33070941 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 366 23 0 0 chr20 39083218 39083261 -33070621 + (TG)n Simple_repeat Simple_repeat 1 43 0 222 105 0 0 chr20 39083429 39083467 -33070415 + (TG)n Simple_repeat Simple_repeat 1 38 0 277 194 40 57 chr20 39083552 39083676 -33070206 + (GTGTG)n Simple_repeat Simple_repeat 5 126 0 511 71 36 0 chr20 39083766 39083850 -33070032 + (TTCCC)n Simple_repeat Simple_repeat 4 90 0 374 254 8 32 chr20 39083931 39084057 -33069825 + (TCTCTG)n Simple_repeat Simple_repeat 4 126 0 599 219 6 0 chr20 39084154 39084332 -33069550 + (TG)n Simple_repeat Simple_repeat 1 179 0 381 151 0 0 chr20 39084677 39084763 -33069119 + (TG)n Simple_repeat Simple_repeat 1 86 0 189 0 0 0 chr20 39084887 39084908 -33068974 + (TG)n Simple_repeat Simple_repeat 2 22 0 191 289 88 44 chr20 39085016 39085130 -33068752 - L3b LINE CR1 -174 1409 1291 225 154 0 0 chr20 39085150 39085189 -33068693 + (TG)n Simple_repeat Simple_repeat 1 39 0 226 225 0 0 chr20 39085367 39085407 -33068475 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 421 243 9 9 chr20 39086016 39086127 -33067755 - L1ME3 LINE L1 -6 6156 6046 207 0 0 0 chr20 39086433 39086456 -33067426 + (TG)n Simple_repeat Simple_repeat 1 23 0 202 266 31 0 chr20 39086474 39086538 -33067344 + C-rich Low_complexity Low_complexity 5 70 0 186 157 29 29 chr20 39087855 39087925 -33065957 + (TCTG)n Simple_repeat Simple_repeat 4 73 0 689 239 88 62 chr20 39088899 39089171 -33064711 + L2 LINE L2 3033 3311 -2 216 179 0 0 chr20 39090077 39090116 -33063766 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 261 0 0 0 chr20 39090187 39090216 -33063666 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 125 0 0 chr20 39090344 39090400 -33063482 + (TG)n Simple_repeat Simple_repeat 2 57 0 305 345 123 38 chr20 39090553 39090976 -33062906 - HAL1 LINE L1 -1219 1288 830 639 179 0 0 chr20 39091057 39091236 -33062646 + (TG)n Simple_repeat Simple_repeat 2 180 0 762 178 2 7 chr20 39091297 39091748 -33062134 + (TG)n Simple_repeat Simple_repeat 1 448 0 527 259 4 0 chr20 39092759 39092999 -33060883 + (TG)n Simple_repeat Simple_repeat 1 241 0 245 229 0 43 chr20 39093099 39093169 -33060713 - L1ME4a LINE L1 0 6121 6055 201 204 0 80 chr20 39093321 39093409 -33060473 + (TCTCTG)n Simple_repeat Simple_repeat 1 81 0 282 116 0 0 chr20 39093725 39093768 -33060114 + (TG)n Simple_repeat Simple_repeat 2 44 0 350 85 37 12 chr20 39094177 39094259 -33059623 + (TG)n Simple_repeat Simple_repeat 1 84 0 337 295 7 58 chr20 39094364 39094503 -33059379 - L1ME4a LINE L1 -1 6120 5989 228 86 0 0 chr20 39094714 39094749 -33059133 + (TG)n Simple_repeat Simple_repeat 1 35 0 685 195 4 4 chr20 39096160 39096432 -33057450 + GA-rich Low_complexity Low_complexity 1 272 0 303 210 0 0 chr20 39096462 39096562 -33057320 + GA-rich Low_complexity Low_complexity 1 100 0 328 328 78 22 chr20 39097429 39097609 -33056273 + L2 LINE L2 2960 3149 -123 845 267 42 9 chr20 39097663 39097880 -33056002 - MIR SINE MIR -10 252 29 746 293 167 49 chr20 39098696 39099366 -33054516 + L2 LINE L2 1686 2434 -880 969 148 0 13 chr20 39099368 39099523 -33054359 + AluSg/x SINE Alu 130 282 -30 222 37 0 0 chr20 39099524 39099551 -33054331 + (CA)n Simple_repeat Simple_repeat 1 27 0 244 390 75 0 chr20 39099644 39099831 -33054051 + L2 LINE L2 2197 2397 -917 503 371 106 20 chr20 39099881 39100239 -33053643 + L2 LINE L2 522 910 -2404 2271 287 146 15 chr20 39100271 39101578 -33052304 + L2 LINE L2 1816 3300 -13 228 35 0 0 chr20 39101762 39101791 -33052091 + (TG)n Simple_repeat Simple_repeat 1 29 0 206 214 0 0 chr20 39101886 39101928 -33051954 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 692 212 0 11 chr20 39102132 39102311 -33051571 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 866 170 0 11 chr20 39102347 39102529 -33051353 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 315 0 0 0 chr20 39102738 39102773 -33051109 + (TG)n Simple_repeat Simple_repeat 2 36 0 211 378 57 25 chr20 39103133 39103416 -33050466 + L2 LINE L2 2296 2587 -727 257 128 21 0 chr20 39103442 39103489 -33050393 + (TCCA)n Simple_repeat Simple_repeat 4 51 0 1959 137 7 7 chr20 39103666 39103965 -33049917 - AluJb SINE Alu -13 299 1 242 349 23 0 chr20 39104144 39104230 -33049652 + L2 LINE L2 3213 3300 -13 207 0 0 0 chr20 39104414 39104437 -33049445 + (TG)n Simple_repeat Simple_repeat 1 23 0 228 217 0 0 chr20 39104528 39104574 -33049308 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 2053 133 0 10 chr20 39105498 39105807 -33048075 - AluJb SINE Alu -6 306 1 396 0 0 0 chr20 39106050 39106094 -33047788 + (TC)n Simple_repeat Simple_repeat 1 44 0 1105 235 0 4 chr20 39106131 39106391 -33047491 + L1M4 LINE L1 4060 4318 -1828 384 356 21 17 chr20 39106474 39106710 -33047172 - L1MC4a LINE L1 -1878 5930 5694 509 136 75 0 chr20 39108103 39108414 -33045468 + (TCCA)n Simple_repeat Simple_repeat 1 334 0 292 218 69 0 chr20 39108436 39108537 -33045345 + (TCCA)n Simple_repeat Simple_repeat 2 109 0 234 274 204 0 chr20 39108541 39108654 -33045228 - L2 LINE L2 0 3272 3137 351 266 0 0 chr20 39108724 39108837 -33045045 + (TG)n Simple_repeat Simple_repeat 1 113 0 306 306 82 0 chr20 39110447 39110617 -33043265 - LTR33 LTR ERVL -317 204 21 181 279 207 27 chr20 39111042 39111153 -33042729 - L2 LINE L2 -6 3266 3136 530 112 63 7 chr20 39111206 39111349 -33042533 + (TG)n Simple_repeat Simple_repeat 1 151 0 1167 131 0 35 chr20 39112687 39112886 -33040996 + AluJo SINE Alu 99 290 -22 513 289 26 11 chr20 39113191 39113381 -33040501 - L1MC4a LINE L1 -1929 5879 5687 313 280 137 23 chr20 39113576 39113751 -33040131 - LTR33 LTR ERVL 0 521 327 379 217 120 46 chr20 39113842 39114017 -33039865 - LTR33 LTR ERVL -310 211 24 450 0 0 0 chr20 39114396 39114446 -33039436 + (TG)n Simple_repeat Simple_repeat 1 50 0 976 107 9 5 chr20 39114673 39114894 -33038988 + (TCCA)n Simple_repeat Simple_repeat 1 222 0 194 81 27 0 chr20 39115578 39115615 -33038267 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 201 274 123 0 chr20 39116236 39116309 -33037573 - L2 LINE L2 -2280 1034 953 1212 123 0 0 chr20 39116564 39116727 -33037155 - AluJo SINE Alu -21 291 129 871 139 0 40 chr20 39117613 39117764 -33036118 - AluJo SINE Alu -167 145 1 1701 164 4 0 chr20 39118234 39118503 -33035379 + AluJb SINE Alu 30 299 -13 229 222 69 14 chr20 39118503 39118575 -33035307 + MLT1F1-int LTR MaLR 819 894 -477 464 253 59 121 chr20 39118744 39119116 -33034766 + MLT1F1-int LTR MaLR 1023 1371 0 1008 100 0 0 chr20 39119143 39119283 -33034599 - AluYa8 SINE Alu -8 302 163 1786 187 86 69 chr20 39119283 39119817 -33034065 + MLT1F1 LTR MaLR 17 559 -8 869 132 6 19 chr20 39119914 39120073 -33033809 + MLT1A1 LTR MaLR 1 157 -208 5419 103 9 2 chr20 39120075 39120935 -33032947 + L1PA15 LINE L1 5297 6162 -3 1111 197 47 0 chr20 39120935 39121169 -33032713 + MLT1A1 LTR MaLR 121 365 0 835 218 76 76 chr20 39121563 39121781 -33032101 - L2 LINE L2 -47 3266 3046 1871 185 38 22 chr20 39121781 39122149 -33031733 - MLT1A2 LTR MaLR 0 374 1 835 218 76 76 chr20 39122149 39122284 -33031598 - L2 LINE L2 -266 3047 2913 709 312 54 22 chr20 39122332 39122742 -33031140 + L1MEc LINE L1 100 522 -5874 600 274 82 12 chr20 39122747 39123075 -33030807 + L1MEc LINE L1 626 976 -5420 * 608 286 61 0 chr20 39123063 39123210 -33030672 - MER91A DNA MER1_type -40 156 1 768 320 114 12 chr20 39123210 39123632 -33030250 - L2 LINE L2 -395 2919 2455 251 54 27 0 chr20 39124845 39124882 -33029000 + (TTCC)n Simple_repeat Simple_repeat 4 41 0 191 267 95 17 chr20 39125277 39125393 -33028489 - L2 LINE L2 -282 2990 2866 1467 118 0 0 chr20 39127019 39127538 -33026344 + (TGGA)n Simple_repeat Simple_repeat 1 519 0 219 193 35 18 chr20 39128568 39128625 -33025257 + GA-rich Low_complexity Low_complexity 4 61 0 445 217 70 16 chr20 39128925 39129054 -33024828 + MER63 DNA MER1_type 28 789 -273 214 318 12 0 chr20 39129559 39129644 -33024238 - L2 LINE L2 -67 3246 3161 599 145 23 8 chr20 39130762 39130893 -33022989 + (TGGA)n Simple_repeat Simple_repeat 1 133 0 651 125 0 0 chr20 39130907 39131011 -33022871 + (GGAA)n Simple_repeat Simple_repeat 1 104 0 691 304 43 10 chr20 39131888 39132191 -33021691 - MLT1F1-int LTR MaLR -751 620 308 398 255 38 25 chr20 39132231 39132388 -33021494 - MLT1F1-int LTR MaLR -1211 160 2 2051 196 76 60 chr20 39132390 39132940 -33020942 - MLT1F1 LTR MaLR -1 566 8 2153 140 0 3 chr20 39133017 39133317 -33020565 + AluSx SINE Alu 1 299 -13 1510 205 36 29 chr20 39133449 39133864 -33020018 - L1ME2 LINE L1 -1 6163 5746 959 93 0 36 chr20 39133864 39134003 -33019879 - AluSg/x SINE Alu -2 310 177 225 36 0 0 chr20 39134003 39134031 -33019851 - U2 snRNA snRNA -153 35 8 1572 91 20 0 chr20 39134031 39134228 -33019654 - AluSq SINE Alu -112 201 1 2287 179 16 20 chr20 39134230 39134696 -33019186 - L1ME2 LINE L1 -416 5748 5283 1502 163 28 78 chr20 39134696 39135015 -33018867 - AluJb SINE Alu -9 303 1 2287 179 16 20 chr20 39135015 39135041 -33018841 - L1ME2 LINE L1 -881 5283 5258 1670 212 36 38 chr20 39135028 39135346 -33018536 - L1ME2 LINE L1 -1159 4987 4669 * 2223 93 3 10 chr20 39135346 39135647 -33018235 - AluSq SINE Alu -14 299 1 1670 212 36 38 chr20 39135647 39135776 -33018106 - L1ME2 LINE L1 -1477 4669 4541 277 339 19 0 chr20 39135997 39136114 -33017768 + MIR SINE MIR 35 152 -68 202 393 0 9 chr20 39136184 39136296 -33017586 + L2 LINE L2 1157 1267 -2047 202 275 155 48 chr20 39137112 39137319 -33016563 + L2 LINE L2 1870 2098 -1216 954 158 12 23 chr20 39137350 39137521 -33016361 - FRAM SINE Alu 0 176 8 319 276 9 19 chr20 39137689 39137794 -33016088 + MLT1-int LTR MaLR 484 587 -784 288 221 0 73 chr20 39137909 39137977 -33015905 - L2 LINE L2 0 3272 3210 700 268 16 58 chr20 39138193 39138503 -33015379 + LTR16A1 LTR ERVL 161 457 0 2456 202 66 69 chr20 39138781 39139504 -33014378 + L1ME1 LINE L1 5441 6161 -5 189 0 0 0 chr20 39139512 39139533 -33014349 + (A)n Simple_repeat Simple_repeat 1 21 0 1169 168 79 113 chr20 39139542 39139861 -33014021 + AluJo SINE Alu 1 309 0 999 184 24 5 chr20 39139873 39140080 -33013802 + L1ME3 LINE L1 5545 5755 -407 1385 233 46 6 chr20 39140279 39140627 -33013255 + L1ME3 LINE L1 5778 6139 -23 1396 196 4 29 chr20 39140654 39140934 -33012948 + AluJo SINE Alu 40 312 0 210 159 43 0 chr20 39141291 39141360 -33012522 + CT-rich Low_complexity Low_complexity 3 74 0 354 287 228 0 chr20 39142087 39142289 -33011593 + L2 LINE L2 2669 2916 -398 2397 144 32 40 chr20 39142351 39142448 -33011434 + MLT1C LTR MaLR 1 97 -370 2399 107 0 0 chr20 39142448 39142756 -33011126 + AluSx SINE Alu 1 308 -4 2397 144 32 40 chr20 39142756 39142788 -33011094 + MLT1C LTR MaLR 97 128 -339 2388 125 57 45 chr20 39142788 39143211 -33010671 + MSTA LTR MaLR 1 428 0 2397 144 32 40 chr20 39143211 39143551 -33010331 + MLT1C LTR MaLR 128 467 0 417 291 23 107 chr20 39143554 39143901 -33009981 + L2 LINE L2 2952 3269 -44 2089 124 13 22 chr20 39144528 39144843 -33009039 + AluJo SINE Alu 1 312 0 322 236 49 57 chr20 39146196 39146319 -33007563 + L1MC4a LINE L1 6053 6174 -1634 701 260 50 20 chr20 39146871 39147071 -33006811 + MIR SINE MIR 39 244 -18 252 253 80 80 chr20 39147087 39147210 -33006672 + L2 LINE L2 2340 2465 -849 204 40 0 0 chr20 39147210 39147235 -33006647 + (TCC)n Simple_repeat Simple_repeat 2 26 0 252 253 80 80 chr20 39147235 39147273 -33006609 + L2 LINE L2 2464 2501 -813 378 316 35 65 chr20 39147276 39147586 -33006296 + L2 LINE L2 1822 2122 -1192 181 321 46 53 chr20 39147803 39147934 -33005948 + L2 LINE L2 2650 2779 -535 1394 169 27 71 chr20 39147934 39148341 -33005541 - L1M4 LINE L1 -744 5402 5014 290 293 147 17 chr20 39148445 39148561 -33005321 + L2 LINE L2 2732 2862 -452 564 229 100 57 chr20 39148880 39149340 -33004542 - L1ME4a LINE L1 -196 5925 5393 279 296 22 30 chr20 39149653 39149788 -33004094 - L1P LINE L1 -1134 5012 4879 637 314 150 42 chr20 39151922 39152502 -33001380 + L2 LINE L2 1983 2499 -773 1175 59 0 32 chr20 39152502 39152688 -33001194 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 637 314 150 42 chr20 39152688 39152703 -33001179 + L2 LINE L2 2499 2511 -761 1920 154 0 40 chr20 39152703 39153028 -33000854 - AluSx SINE Alu 0 312 1 637 314 150 42 chr20 39153028 39153571 -33000311 + L2 LINE L2 2511 3264 -8 811 310 47 52 chr20 39153578 39154000 -32999882 + L2 LINE L2 1706 2125 -1189 730 239 28 75 chr20 39154003 39154321 -32999561 + L1M4 LINE L1 4532 4834 -1312 1034 318 33 23 chr20 39154928 39155504 -32998378 - L1ME4a LINE L1 -215 5906 5325 195 42 0 0 chr20 39155716 39155740 -32998142 + (T)n Simple_repeat Simple_repeat 1 24 0 2363 108 0 7 chr20 39155760 39156066 -32997816 + AluSq SINE Alu 1 304 -9 24 32 0 0 chr20 39156116 39156147 -32997735 + AT_rich Low_complexity Low_complexity 1 31 0 278 274 53 44 chr20 39156655 39156768 -32997114 + MIR SINE MIR 39 152 -56 467 325 96 37 chr20 39156825 39157179 -32996703 - L2 LINE L2 -50 3263 2889 2263 99 0 0 chr20 39157189 39157506 -32996376 + AluSx SINE Alu 1 317 0 882 287 136 44 chr20 39159000 39159286 -32994596 + L2 LINE L2 1897 2155 -1159 2187 116 3 0 chr20 39159286 39159578 -32994304 - AluSx SINE Alu -19 293 1 882 287 136 44 chr20 39159578 39160203 -32993679 + L2 LINE L2 2155 2892 -422 2038 85 4 0 chr20 39160216 39160474 -32993408 - AluY SINE Alu -4 307 49 537 261 195 8 chr20 39160476 39160722 -32993160 + MLT1L LTR MaLR 244 613 -2 269 304 243 25 chr20 39160724 39160908 -32992974 + L2 LINE L2 2869 3012 -260 1966 131 3 67 chr20 39160908 39161237 -32992645 - AluJo SINE Alu -4 308 1 269 304 243 25 chr20 39161237 39161332 -32992550 + L2 LINE L2 3012 3209 -63 780 251 144 31 chr20 39161373 39161728 -32992154 - LTR33 LTR ERVL -4 517 123 371 200 0 0 chr20 39161728 39161793 -32992089 - Tigger5 DNA MER2_type 0 2323 2259 2017 144 0 13 chr20 39161805 39162110 -32991772 - AluSx SINE Alu -11 301 1 337 167 0 0 chr20 39162139 39162193 -32991689 - Tigger5 DNA MER2_type -2268 55 2 299 229 101 9 chr20 39162195 39162304 -32991578 - LTR33 LTR ERVL -398 123 5 382 327 89 54 chr20 39162522 39163798 -32990084 + L2 LINE L2 1631 3043 -229 876 252 151 62 chr20 39163940 39163995 -32989887 - MLT1H1 LTR MaLR -13 542 493 1864 185 3 3 chr20 39163995 39164303 -32989579 + AluJb SINE Alu 1 308 -4 876 252 151 62 chr20 39164303 39164766 -32989116 - MLT1H1 LTR MaLR -62 493 13 251 356 64 25 chr20 39165664 39165900 -32987982 + L2 LINE L2 2451 2695 -619 420 317 78 0 chr20 39166106 39166248 -32987634 - MIR SINE MIR -10 252 100 246 274 68 0 chr20 39166515 39166588 -32987294 + MLT1K LTR MaLR 507 584 -4 2264 112 7 7 chr20 39166630 39166935 -32986947 + AluSx SINE Alu 1 305 -7 899 210 18 0 chr20 39167376 39167543 -32986339 - FAM SINE Alu -5 170 1 241 282 91 0 chr20 39167697 39167807 -32986075 - MLT1L LTR MaLR 0 615 496 256 256 47 47 chr20 39167851 39167937 -32985945 - MLT1L LTR MaLR -221 394 309 1861 186 0 3 chr20 39167968 39168269 -32985613 - AluJb SINE Alu -12 300 1 277 228 40 30 chr20 39168598 39168699 -32985183 - HAL1b LINE L1 -500 848 747 21 36 0 0 chr20 39168980 39169008 -32984874 + AT_rich Low_complexity Low_complexity 1 28 0 337 347 6 0 chr20 39169183 39169359 -32984523 + L1MC4a LINE L1 4397 4573 -1573 521 264 122 29 chr20 39169675 39170501 -32983381 + L1MC4a LINE L1 4981 5887 -277 575 280 32 65 chr20 39170905 39171108 -32982774 + L1ME LINE L1 4381 4570 -1576 2236 120 0 0 chr20 39171108 39171407 -32982475 + AluSg SINE Alu 1 299 -11 575 280 32 65 chr20 39171407 39171542 -32982340 + L1ME LINE L1 4570 4708 -1438 195 42 0 0 chr20 39171808 39171832 -32982050 + (CA)n Simple_repeat Simple_repeat 1 24 0 755 267 102 22 chr20 39171839 39172538 -32981344 + L1ME LINE L1 5024 5789 -373 522 318 49 44 chr20 39173042 39173172 -32980710 + L1M4 LINE L1 4358 4486 -1660 207 0 0 0 chr20 39173172 39173195 -32980687 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 522 318 49 44 chr20 39173195 39173400 -32980482 + L1M4 LINE L1 4486 4698 -1448 2267 115 0 3 chr20 39173400 39173705 -32980177 + AluSx SINE Alu 1 304 -8 522 318 49 44 chr20 39173705 39173818 -32980064 + L1M4 LINE L1 4698 4809 -1337 334 254 63 21 chr20 39173860 39174002 -32979880 + L1M4 LINE L1 4905 5052 -1094 191 294 82 44 chr20 39174182 39174307 -32979575 + MIR SINE MIR 20 151 -57 425 321 158 50 chr20 39175185 39176235 -32977647 + L2 LINE L2 2053 3312 -1 839 331 111 4 chr20 39176419 39176914 -32976968 + L2 LINE L2 1862 2409 -905 830 196 0 0 chr20 39176958 39177101 -32976781 + FLAM_C SINE Alu 1 143 0 272 268 83 91 chr20 39178080 39178476 -32975406 + L2 LINE L2 1797 2189 -1125 999 324 143 26 chr20 39178751 39179634 -32974248 + L2 LINE L2 1860 2845 -469 378 0 0 0 chr20 39179917 39179959 -32973923 + (TG)n Simple_repeat Simple_repeat 2 43 0 784 197 0 0 chr20 39179961 39180083 -32973799 - FLAM_C SINE Alu -20 123 2 209 260 80 0 chr20 39180096 39180146 -32973736 + L2 LINE L2 3255 3308 -5 563 260 68 43 chr20 39180191 39180495 -32973387 - L1MC/D LINE L1 -549 5572 5259 565 221 41 0 chr20 39181353 39181475 -32972407 - MIR3 SINE MIR -17 191 65 201 74 0 0 chr20 39181824 39181851 -32972031 + (A)n Simple_repeat Simple_repeat 1 27 0 2240 113 3 3 chr20 39181991 39182293 -32971589 - AluSx SINE Alu -8 304 3 210 344 149 18 chr20 39182870 39183091 -32970791 + MIR SINE MIR 8 257 -5 214 267 37 52 chr20 39184292 39184423 -32969459 + MIR SINE MIR 14 143 -67 295 252 81 49 chr20 39185248 39185371 -32968511 - MIR3 SINE MIR -11 197 71 225 316 138 53 chr20 39187234 39187459 -32966423 + L2 LINE L2 2974 3217 -55 205 234 117 99 chr20 39188361 39188472 -32965410 + L2 LINE L2 3116 3228 -44 355 343 64 17 chr20 39188533 39188705 -32965177 + L1M4 LINE L1 3087 3266 -2880 191 88 29 0 chr20 39191427 39191461 -32962421 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 294 29 0 0 chr20 39191461 39191496 -32962386 + (A)n Simple_repeat Simple_repeat 1 35 0 304 278 92 92 chr20 39193933 39194271 -32959611 + L1M2 LINE L1 1733 2070 -4779 248 203 0 78 chr20 39195598 39195662 -32958220 + L2 LINE L2 3121 3179 -93 228 366 27 27 chr20 39196845 39196957 -32956925 + MIR SINE MIR 18 129 -79 226 175 0 48 chr20 39199866 39199929 -32953953 + (CCG)n Simple_repeat Simple_repeat 3 62 0 292 305 113 82 chr20 39200539 39200893 -32952989 - L2 LINE L2 -2 3311 2947 1078 250 249 20 chr20 39200957 39201641 -32952241 - L2 LINE L2 -516 2798 1959 238 250 259 0 chr20 39201758 39201870 -32952012 - MLT1L LTR MaLR -128 487 347 2040 242 60 13 chr20 39202796 39203395 -32950487 + L1ME3 LINE L1 5476 6102 -60 615 191 0 0 chr20 39203412 39203517 -32950365 + AluSg/x SINE Alu 204 308 -1 2408 110 0 0 chr20 39203574 39203883 -32949999 + AluSg SINE Alu 1 309 -1 373 246 140 68 chr20 39204264 39204481 -32949401 + L2 LINE L2 2443 2643 -629 2162 120 7 3 chr20 39204481 39204781 -32949101 - AluSx SINE Alu -11 301 1 373 246 140 68 chr20 39204781 39204912 -32948970 + L2 LINE L2 2643 3047 -225 381 238 0 0 chr20 39204914 39204994 -32948888 - L2 LINE L2 -3 3310 3231 1944 122 0 86 chr20 39204995 39205322 -32948560 + AluJb SINE Alu 1 299 -13 184 152 0 109 chr20 39205401 39205447 -32948435 + L2 LINE L2 3137 3177 -95 748 249 37 5 chr20 39205896 39206085 -32947797 + MIR SINE MIR 24 218 -44 2364 102 0 0 chr20 39206094 39206388 -32947494 + AluSq SINE Alu 1 294 -19 244 312 71 18 chr20 39206810 39206980 -32946902 + L2 LINE L2 2493 2671 -643 448 313 69 42 chr20 39206992 39207048 -32946834 - L2 LINE L2 -553 2761 2708 2256 83 0 33 chr20 39207048 39207350 -32946532 - AluSq SINE Alu -21 292 1 448 313 69 42 chr20 39207350 39207555 -32946327 - L2 LINE L2 -606 2708 2493 4106 130 29 24 chr20 39207560 39208135 -32945747 + MER50 LTR ERV1 7 587 -147 5145 75 38 0 chr20 39208135 39208801 -32945081 + LTR8 LTR ERV1 1 691 0 4106 130 29 24 chr20 39208801 39208927 -32944955 + MER50 LTR ERV1 587 711 -23 342 261 113 0 chr20 39209106 39209221 -32944661 - L2 LINE L2 -836 2478 2351 831 289 64 20 chr20 39209747 39210093 -32943789 + L2 LINE L2 2904 3264 -49 725 229 18 6 chr20 39210098 39210264 -32943618 - MLT1I LTR MaLR -12 397 230 305 219 16 0 chr20 39210468 39210532 -32943350 - MIR SINE MIR -136 126 62 1966 145 137 11 chr20 39210533 39210913 -32942969 + MSTA LTR MaLR 1 428 0 261 231 0 19 chr20 39210917 39210969 -32942913 + MIR SINE MIR 18 68 -194 578 103 77 17 chr20 39210990 39211107 -32942775 + L1MC4 LINE L1 7006 7129 -913 1860 200 145 17 chr20 39211111 39211641 -32942241 + L1MC4 LINE L1 7297 7894 -148 423 68 0 0 chr20 39211644 39211703 -32942179 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 1317 96 11 0 chr20 39211706 39211894 -32941988 - MER4E LTR ERV1 -4 762 573 21 57 0 0 chr20 39211894 39211929 -32941953 + AT_rich Low_complexity Low_complexity 1 35 0 1828 136 84 75 chr20 39212005 39212432 -32941450 - MER4B LTR ERV1 -179 431 1 539 207 8 17 chr20 39212434 39212592 -32941290 + L1MC4 LINE L1 6241 6358 -1 2196 128 3 13 chr20 39212747 39213060 -32940822 + AluSx SINE Alu 1 310 -2 431 269 77 32 chr20 39213095 39213251 -32940631 + MIR SINE MIR 94 256 -6 605 218 6 32 chr20 39213251 39213407 -32940475 + L1MA10 LINE L1 6170 6321 -13 2236 123 3 3 chr20 39213654 39213962 -32939920 + AluSx SINE Alu 1 308 -4 1048 159 39 10 chr20 39214005 39214213 -32939669 + L1ME2 LINE L1 5847 6060 -104 604 156 125 0 chr20 39214234 39214362 -32939520 - LTR47A LTR ERVL -44 408 265 370 225 25 0 chr20 39214638 39214718 -32939164 + L1ME2 LINE L1 6068 6149 -15 2200 110 0 0 chr20 39214759 39215070 -32938812 + AluSx SINE Alu 1 311 0 348 197 54 84 chr20 39215081 39215147 -32938735 + L1MC4 LINE L1 7837 7903 -139 1398 194 44 27 chr20 39215147 39215441 -32938441 + AluJo SINE Alu 1 299 -13 348 197 54 84 chr20 39215441 39215577 -32938305 + L1MC4 LINE L1 7903 8033 -9 457 335 174 0 chr20 39215925 39216080 -32937802 - MER91A DNA MER1_type -7 189 8 593 314 21 0 chr20 39216809 39216997 -32936885 + MIR SINE MIR 52 243 -19 1704 244 71 16 chr20 39217444 39217882 -32936000 + L2 LINE L2 2262 2723 -591 719 180 167 0 chr20 39217882 39218032 -32935850 + AluJb SINE Alu 130 304 -8 1213 239 96 83 chr20 39218033 39218291 -32935591 + L2 LINE L2 2713 2966 -347 2361 90 0 3 chr20 39218291 39218591 -32935291 - AluSg SINE Alu -11 299 1 1213 239 96 83 chr20 39218591 39218771 -32935111 + L2 LINE L2 2966 3158 -155 1886 160 3 0 chr20 39218771 39219079 -32934803 - AluJb SINE Alu 0 309 1 1213 239 96 83 chr20 39219079 39219229 -32934653 + L2 LINE L2 3158 3305 -8 2296 169 65 18 chr20 39219232 39219888 -32933994 - MER21A LTR ERV1 -132 799 1 679 276 23 0 chr20 39219900 39220114 -32933768 + L1M4 LINE L1 4465 4683 -1463 261 186 0 6 chr20 39220117 39220176 -32933706 + AluSg/x SINE Alu 118 171 -131 435 179 11 0 chr20 39220185 39220280 -32933602 - L1MEc LINE L1 -4663 2459 2364 * 8132 133 19 48 chr20 39220269 39220878 -32933004 - L1MA4 LINE L1 -1 6299 5673 2757 42 0 0 chr20 39220878 39221189 -32932693 + AluY SINE Alu 1 311 0 8132 133 19 48 chr20 39221189 39221269 -32932613 - L1MA4 LINE L1 -627 5673 5592 2142 125 0 58 chr20 39221269 39221598 -32932284 - AluSg SINE Alu 0 310 1 8132 133 19 48 chr20 39221598 39222188 -32931694 - L1MA4 LINE L1 -708 5592 4986 4901 69 3 18 chr20 39222188 39222809 -32931073 - SVA Other Other 0 1386 775 8132 133 19 48 chr20 39222809 39223217 -32930665 - L1MA4 LINE L1 -1314 4986 4567 2314 113 3 0 chr20 39223217 39223518 -32930364 - AluSp SINE Alu -11 302 1 8132 133 19 48 chr20 39223518 39223744 -32930138 - L1MA4 LINE L1 -1733 4567 4336 1926 142 0 24 chr20 39223744 39224039 -32929843 - AluJb SINE Alu -4 308 21 8132 133 19 48 chr20 39224039 39225246 -32928636 - L1MA4 LINE L1 -1964 4336 3246 2457 165 11 9 chr20 39225245 39225416 -32928466 + L1M4 LINE L1 2873 3042 -3104 * 1948 181 0 10 chr20 39225416 39225725 -32928157 + AluJb SINE Alu 1 306 -6 2457 165 11 9 chr20 39225725 39226092 -32927790 + L1M4 LINE L1 3042 3412 -2734 1000 208 9 0 chr20 39226090 39226311 -32927571 - L1MA4 LINE L1 -3272 2874 2652 * 1020 122 32 154 chr20 39226323 39226544 -32927338 + MER70B LTR ERVL 279 476 0 4421 126 20 4 chr20 39226624 39227313 -32926569 + MER50 LTR ERV1 7 706 -28 450 177 14 113 chr20 39227319 39227421 -32926461 - L1MEc LINE L1 -6278 145 59 2195 121 0 0 chr20 39227421 39227718 -32926164 - AluSx SINE Alu -15 297 1 450 177 14 113 chr20 39227718 39227756 -32926126 - L1MEc LINE L1 -6364 59 19 1024 243 33 7 chr20 39227793 39228098 -32925784 + L1M4 LINE L1 4325 4637 -1509 564 115 90 8 chr20 39228098 39228220 -32925662 + L1MB7 LINE L1 6053 6184 0 2082 143 3 0 chr20 39228226 39228526 -32925356 + AluSx SINE Alu 1 301 -11 254 239 65 0 chr20 39228570 39228662 -32925220 - MER96 DNA MER1_type? -77 98 1 940 272 102 42 chr20 39228847 39229296 -32924586 + L2 LINE L2 2838 3313 0 190 320 10 99 chr20 39229291 39229603 -32924279 - L2 LINE L2 -76 3196 2913 * 390 151 0 0 chr20 39229615 39229688 -32924194 + (TG)n Simple_repeat Simple_repeat 2 74 0 2079 136 10 7 chr20 39229756 39230065 -32923817 + AluJb SINE Alu 1 310 -2 888 159 0 0 chr20 39230194 39230326 -32923556 - FLAM_C SINE Alu 0 133 2 372 118 0 35 chr20 39230373 39230458 -32923424 - MER113 DNA MER1_type? -376 145 64 932 244 137 16 chr20 39230946 39231311 -32922571 + LTR16C LTR ERVL 83 491 0 3754 136 47 0 chr20 39231524 39232021 -32921861 + MER41B LTR ERV1 2 533 -102 2053 130 20 3 chr20 39232021 39232321 -32921561 - AluSx SINE Alu -2 310 6 3754 136 47 0 chr20 39232321 39232421 -32921461 + MER41B LTR ERV1 533 627 -8 613 251 62 22 chr20 39232477 39232656 -32921226 + L2 LINE L2 2921 3106 -207 529 210 95 2 chr20 39232673 39232816 -32921066 - L1ME1 LINE L1 0 6334 6024 2102 94 106 44 chr20 39232844 39233051 -32920831 + MER41C LTR ERV1 1 241 -313 2461 77 3 7 chr20 39233051 39233361 -32920521 - AluSg SINE Alu -1 309 1 2102 94 106 44 chr20 39233361 39233513 -32920369 + MER41C LTR ERV1 241 382 -172 1750 94 0 0 chr20 39233519 39233743 -32920139 - AluSg/x SINE Alu -8 302 79 874 98 0 0 chr20 39233743 39233866 -32920016 + MER41B LTR ERV1 513 635 0 1548 179 13 88 chr20 39233867 39234151 -32919731 - L1ME1 LINE L1 -179 5985 5681 2219 97 0 4 chr20 39234151 39234455 -32919427 + AluSg SINE Alu 2 304 0 1548 179 13 88 chr20 39234455 39234497 -32919385 - L1ME1 LINE L1 -483 5681 5688 4080 93 22 0 chr20 39234497 39235035 -32918847 - MER41A LTR ERV1 0 554 5 1548 179 13 88 chr20 39235035 39235102 -32918780 - L1ME1 LINE L1 -475 5689 5619 222 284 157 29 chr20 39235146 39235248 -32918634 + L2 LINE L2 3157 3271 -1 3432 142 53 33 chr20 39235541 39236224 -32917658 + LTR8A LTR ERV1 1 691 0 258 219 179 41 chr20 39236273 39236396 -32917486 - MER115 DNA AcHobo -257 436 297 186 189 27 0 chr20 39236908 39236945 -32916937 + L3 LINE CR1 1514 1551 -26 555 316 54 30 chr20 39237376 39237876 -32916006 - L2 LINE L2 -45 3268 2527 2256 131 0 0 chr20 39237884 39238196 -32915686 + AluSx SINE Alu 1 312 0 255 250 69 95 chr20 39238370 39238486 -32915396 + MER5A DNA MER1_type 3 115 -74 401 228 13 0 chr20 39239213 39239292 -32914590 - MIR SINE MIR -114 148 69 246 331 31 55 chr20 39240190 39240317 -32913565 + MIR3 SINE MIR 37 160 -48 687 244 77 12 chr20 39240570 39240738 -32913144 + L3 LINE CR1 1388 1566 -11 2670 112 2 19 chr20 39240743 39241161 -32912721 - L1PA13 LINE L1 -7 6156 5746 1967 167 10 0 chr20 39241431 39241736 -32912146 - AluJb SINE Alu -4 308 1 867 106 0 38 chr20 39241836 39241858 -32912024 - AluSg/x SINE Alu -11 299 278 1262 148 30 4 chr20 39241858 39242094 -32911788 - L1MA3 LINE L1 0 6305 6064 867 106 0 38 chr20 39242094 39242203 -32911679 - AluSg/x SINE Alu -32 278 173 1672 140 0 7 chr20 39242203 39242489 -32911393 - L1MA3 LINE L1 -241 6064 5781 377 266 0 0 chr20 39242974 39243053 -32910829 + MER63 DNA MER1_type 673 751 -85 285 268 0 14 chr20 39243054 39243125 -32910757 + MER63 DNA MER1_type 979 1048 -14 2224 107 10 7 chr20 39243446 39243746 -32910136 - AluSx SINE Alu -11 301 1 275 302 0 0 chr20 39243787 39243862 -32910020 - MIR SINE MIR -63 145 79 187 297 16 16 chr20 39243878 39243942 -32909940 - MIR SINE MIR -1 261 198 791 223 121 19 chr20 39243944 39244200 -32909682 - LTR16A1 LTR ERVL -3 454 173 2405 96 7 0 chr20 39244254 39244289 -32909593 - AluSx SINE Alu 0 542 509 1091 81 5 32 chr20 39244289 39244474 -32909408 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2405 96 7 0 chr20 39244474 39244794 -32909088 - AluSx SINE Alu -33 509 1 706 204 29 0 chr20 39244859 39244996 -32908886 - MIR SINE MIR -62 200 60 2226 125 0 0 chr20 39245177 39245466 -32908416 + AluSx SINE Alu 1 289 -23 426 248 0 29 chr20 39245583 39245688 -32908194 + MIR SINE MIR 109 210 -52 223 309 9 9 chr20 39246087 39246197 -32907685 + (TG)n Simple_repeat Simple_repeat 1 110 0 2076 120 7 3 chr20 39247298 39247607 -32906275 - AluSq SINE Alu 0 310 1 2129 119 28 0 chr20 39248401 39248687 -32905195 - AluSx SINE Alu -12 300 7 352 282 164 64 chr20 39248699 39249029 -32904853 + L2 LINE L2 2894 3256 -16 274 218 30 89 chr20 39249322 39249423 -32904459 + MIR SINE MIR 53 141 -67 3292 87 12 37 chr20 39249686 39250171 -32903711 + MER1A DNA MER1_type 57 529 0 379 221 0 0 chr20 39250171 39250239 -32903643 - L2 LINE L2 -21 3292 3225 325 237 140 0 chr20 39250274 39250367 -32903515 - L2 LINE L2 0 3313 3208 268 315 11 22 chr20 39250470 39250562 -32903320 - MIR SINE MIR -152 110 20 2142 112 14 14 chr20 39250613 39250907 -32902975 - AluSx SINE Alu -18 294 1 2248 132 0 0 chr20 39251593 39251897 -32901985 - AluSx SINE Alu -8 304 1 536 245 167 31 chr20 39252186 39252378 -32901504 - MIR SINE MIR -29 233 16 1708 142 59 7 chr20 39252725 39253013 -32900869 + AluJb SINE Alu 1 303 -9 222 227 45 15 chr20 39253589 39253655 -32900227 + MIR SINE MIR 78 145 -63 202 230 135 81 chr20 39254302 39254450 -32899432 + L2 LINE L2 376 531 -2783 1314 139 72 0 chr20 39254523 39254732 -32899150 + AluSg/x SINE Alu 89 312 0 2557 150 28 6 chr20 39254742 39255208 -32898674 - MER31A LTR ERV1 -6 479 4 224 0 65 0 chr20 39255231 39255262 -32898620 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 2283 117 0 28 chr20 39255304 39255621 -32898261 - AluSx SINE Alu -4 308 1 203 227 30 0 chr20 39255716 39255782 -32898100 + (TA)n Simple_repeat Simple_repeat 1 68 0 347 308 19 6 chr20 39255785 39255944 -32897938 - L1ME3A LINE L1 -230 5940 5780 882 209 94 17 chr20 39255963 39256197 -32897685 + L1ME LINE L1 5522 5773 -389 682 211 58 0 chr20 39257459 39257630 -32896252 + L1M4 LINE L1 16 196 -6346 850 196 13 13 chr20 39257631 39257789 -32896093 - AluJb SINE Alu -12 300 143 673 205 12 53 chr20 39257831 39258002 -32895880 + MER21B LTR ERV1 1 164 -699 2131 269 37 32 chr20 39258013 39258983 -32894899 + L1M4 LINE L1 1461 2555 -4270 2320 116 3 0 chr20 39258983 39259285 -32894597 + AluSq SINE Alu 1 303 -10 2131 269 37 32 chr20 39259285 39259408 -32894474 + L1M4 LINE L1 2555 2676 -4149 3076 243 15 14 chr20 39259412 39260290 -32893592 + L1M4 LINE L1 2776 3654 -2990 3720 162 62 7 chr20 39260292 39260988 -32892894 + L1MB7 LINE L1 5443 6176 -8 2275 116 3 3 chr20 39261087 39261397 -32892485 - AluSx SINE Alu -2 310 1 308 238 197 7 chr20 39261405 39261552 -32892330 - MER104 DNA Tc2 -2 178 4 1548 149 24 98 chr20 39261771 39262107 -32891775 + AluYb8 SINE Alu 1 311 -7 2093 138 0 10 chr20 39262521 39262825 -32891057 - AluJb SINE Alu -11 301 1 467 241 17 17 chr20 39264074 39264190 -32889692 + MIR SINE MIR 31 146 -62 453 265 0 10 chr20 39264415 39264517 -32889365 + MIR SINE MIR 83 183 -79 280 200 17 17 chr20 39264589 39264649 -32889233 + MIR SINE MIR 184 243 -19 628 282 110 31 chr20 39264929 39265156 -32888726 - MIR SINE MIR -5 257 13 604 325 60 5 chr20 39265224 39265424 -32888458 - MIR SINE MIR -32 230 20 182 182 0 68 chr20 39265436 39265480 -32888402 - L2 LINE L2 -401 2913 2873 189 385 103 0 chr20 39265562 39265718 -32888164 - L2 LINE L2 -556 2758 2587 2348 102 0 13 chr20 39266395 39266710 -32887172 - AluSx SINE Alu -1 311 1 550 282 8 0 chr20 39266753 39266877 -32887005 - FLAM_A SINE Alu -8 125 1 714 239 42 46 chr20 39267037 39267101 -32886781 - L1ME3 LINE L1 -2 6160 6097 2129 100 13 39 chr20 39267101 39267410 -32886472 - AluSx SINE Alu -11 301 1 714 239 42 46 chr20 39267410 39267608 -32886274 - L1ME3 LINE L1 -65 6097 5899 1868 171 14 0 chr20 39267843 39268129 -32885753 + AluJb SINE Alu 1 290 -22 807 228 246 21 chr20 39268136 39268474 -32885408 - MLT1K LTR MaLR -10 578 165 1644 116 86 73 chr20 39268634 39268936 -32884946 + AluJo SINE Alu 1 306 -6 2495 177 18 46 chr20 39269233 39269729 -32884153 + MER66B LTR ERV1 5 486 0 217 256 26 90 chr20 39269940 39270018 -32883864 - L2 LINE L2 -74 3198 3126 189 74 0 0 chr20 39270696 39270723 -32883159 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 434 314 92 28 chr20 39270723 39270999 -32882883 - L2 LINE L2 -10 3262 2966 235 314 182 25 chr20 39271381 39271502 -32882380 + MIR3 SINE MIR 6 145 -63 294 170 0 0 chr20 39271555 39271608 -32882274 + MER74B LTR ERVL 1 53 -569 196 40 0 0 chr20 39271623 39271648 -32882234 - MIR SINE MIR -225 37 13 1834 182 0 0 chr20 39271667 39271953 -32881929 + AluJb SINE Alu 1 286 -26 306 0 0 0 chr20 39271953 39271987 -32881895 + (CAAAT)n Simple_repeat Simple_repeat 2 35 0 944 200 132 11 chr20 39272001 39272266 -32881616 + MER74B LTR ERVL 259 555 -67 257 268 92 37 chr20 39272969 39273133 -32880749 + LTR33A LTR ERVL 351 523 0 244 198 142 47 chr20 39273192 39273298 -32880584 + L3 LINE CR1 975 1090 -487 3061 102 12 19 chr20 39273367 39273798 -32880084 + MSTC LTR MaLR 1 428 0 313 277 12 0 chr20 39273814 39273897 -32879985 + L2 LINE L2 2592 2675 -639 997 118 0 9 chr20 39275313 39275539 -32878343 + (TTCC)n Simple_repeat Simple_repeat 1 223 0 1917 154 35 0 chr20 39275539 39275825 -32878057 - AluJo SINE Alu -16 296 1 431 313 0 0 chr20 39276082 39276194 -32877688 - L2 LINE L2 -1 3312 3201 385 239 56 169 chr20 39276191 39276547 -32877335 + L2 LINE L2 2920 3235 -37 * 204 40 0 0 chr20 39276555 39276580 -32877302 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 502 310 19 46 chr20 39276815 39276913 -32876969 + MIR SINE MIR 53 152 -110 1858 171 49 25 chr20 39276913 39277240 -32876642 + MER1B DNA MER1_type 3 337 0 502 310 19 46 chr20 39277240 39277357 -32876525 + MIR SINE MIR 152 262 0 1594 159 12 0 chr20 39277842 39278087 -32875795 + AluJo SINE Alu 2 249 -63 469 268 76 13 chr20 39278261 39278319 -32875563 - L1MC4a LINE L1 -1911 5897 5844 2042 130 0 3 chr20 39278319 39278624 -32875258 - AluSx SINE Alu 0 304 1 469 268 76 13 chr20 39278624 39278720 -32875162 - L1MC4a LINE L1 -1964 5844 5731 287 298 12 0 chr20 39278729 39278813 -32875069 - L1MC4a LINE L1 -2154 5654 5570 2086 142 0 0 chr20 39278897 39279192 -32874690 - AluSx SINE Alu -17 295 1 260 167 19 19 chr20 39279380 39279434 -32874448 + LTR16A1 LTR ERVL 259 312 -145 1064 216 94 95 chr20 39279441 39279578 -32874304 + MLT1F1 LTR MaLR 1 137 -430 2388 81 14 0 chr20 39279578 39279874 -32874008 + AluSq SINE Alu 1 300 -13 1064 216 94 95 chr20 39279874 39279961 -32873921 + MLT1F1 LTR MaLR 137 223 -344 707 57 0 19 chr20 39279961 39280067 -32873815 + (ATATG)n Simple_repeat Simple_repeat 3 106 0 1064 216 94 95 chr20 39280067 39280184 -32873698 + MLT1F1 LTR MaLR 223 339 -228 2056 142 0 0 chr20 39280184 39280472 -32873410 - AluSx SINE Alu -24 288 1 1064 216 94 95 chr20 39280472 39280664 -32873218 + MLT1F1 LTR MaLR 339 567 0 374 197 59 92 chr20 39280664 39280735 -32873147 + LTR16A1 LTR ERVL 321 386 -71 2254 76 28 14 chr20 39280735 39281026 -32872856 - AluSq SINE Alu -18 295 1 374 197 59 92 chr20 39281026 39281096 -32872786 + LTR16A1 LTR ERVL 386 457 0 1898 154 171 11 chr20 39281779 39282148 -32871734 - MSTA LTR MaLR 0 428 1 436 262 227 0 chr20 39282320 39282461 -32871421 - MIR SINE MIR -29 233 61 838 231 187 3 chr20 39282534 39282855 -32871027 + LTR16C LTR ERVL 103 482 -9 1982 99 67 18 chr20 39283032 39283315 -32870567 - AluSx SINE Alu -15 297 1 409 318 47 27 chr20 39283797 39283945 -32869937 + L2 LINE L2 3122 3272 0 623 226 48 43 chr20 39284009 39284217 -32869665 - MLT1K LTR MaLR -13 575 367 247 236 0 56 chr20 39284286 39284358 -32869524 + MIR3 SINE MIR 110 177 -31 526 284 8 8 chr20 39284372 39284499 -32869383 - MIR3 SINE MIR -38 170 44 506 250 91 11 chr20 39284677 39284853 -32869029 + MIR SINE MIR 39 228 -34 1727 191 0 0 chr20 39284940 39285253 -32868629 + AluJb SINE Alu 1 313 0 3012 113 7 5 chr20 39285311 39285737 -32868145 + MSTA LTR MaLR 2 428 0 293 291 17 60 chr20 39286017 39286134 -32867748 - MIR3 SINE MIR -15 193 82 194 175 250 50 chr20 39286272 39286352 -32867530 + MIR SINE MIR 52 147 -61 249 125 0 0 chr20 39286507 39286555 -32867327 + MER113 DNA MER1_type? 61 108 -413 225 0 0 0 chr20 39286603 39286628 -32867254 + (TA)n Simple_repeat Simple_repeat 2 26 0 2273 118 0 0 chr20 39286628 39286932 -32866950 - AluSx SINE Alu -8 304 1 212 389 0 0 chr20 39287099 39287189 -32866693 - MIR SINE MIR -81 127 38 294 301 155 35 chr20 39287231 39287457 -32866425 + L2 LINE L2 2909 3161 -111 239 302 47 0 chr20 39288191 39288277 -32865605 - MIR SINE MIR -53 209 120 1253 270 146 11 chr20 39288282 39288777 -32865105 - L2 LINE L2 -4 3309 2742 836 119 10 98 chr20 39288789 39288816 -32865066 + MER53 DNA DNA 11 39 -150 1654 203 39 0 chr20 39288816 39289102 -32864780 + AluJb SINE Alu 1 297 -15 836 119 10 98 chr20 39289102 39289267 -32864615 + MER53 DNA DNA 39 186 -3 1600 249 39 25 chr20 39289272 39289714 -32864168 - L2 LINE L2 -565 2749 2302 689 139 148 66 chr20 39289728 39289977 -32863905 + MLT1C LTR MaLR 4 270 -173 205 257 27 27 chr20 39289999 39290073 -32863809 - L2 LINE L2 -1032 2282 2209 25 0 0 0 chr20 39290073 39290098 -32863784 + AT_rich Low_complexity Low_complexity 1 25 0 2214 110 3 3 chr20 39290098 39290389 -32863493 - AluSx SINE Alu -21 291 1 1294 258 61 3 chr20 39290395 39290763 -32863119 - L2 LINE L2 -1099 2215 1823 1700 167 4 0 chr20 39290763 39291026 -32862856 + AluJb SINE Alu 42 305 -7 298 266 13 13 chr20 39291033 39291112 -32862770 + CT-rich Low_complexity Low_complexity 6 84 0 481 284 189 41 chr20 39291387 39291806 -32862076 - L2 LINE L2 0 3313 2833 797 154 8 8 chr20 39291809 39291932 -32861950 + FLAM_C SINE Alu 2 124 -19 674 316 107 42 chr20 39291941 39292088 -32861794 - L2 LINE L2 -470 2844 2708 2767 113 16 0 chr20 39292088 39292513 -32861369 - L1MA5A LINE L1 -2 6295 5864 674 316 107 42 chr20 39292513 39292909 -32860973 - L2 LINE L2 -606 2708 2266 308 271 102 57 chr20 39293018 39293262 -32860620 - L2 LINE L2 -205 3067 2813 1207 172 48 31 chr20 39293379 39293606 -32860276 - AluJb SINE Alu -81 231 1 207 0 0 0 chr20 39293637 39293660 -32860222 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2258 92 28 0 chr20 39293662 39293944 -32859938 - AluSg SINE Alu -20 290 1 249 295 66 59 chr20 39293994 39294151 -32859731 + MIR SINE MIR 6 167 -63 201 241 0 0 chr20 39294153 39294207 -32859675 + CT-rich Low_complexity Low_complexity 3 56 0 444 307 186 35 chr20 39294207 39294631 -32859251 - L2 LINE L2 -1 3312 2825 293 267 118 41 chr20 39294934 39295129 -32858753 + MLT1H LTR MaLR 132 341 -208 571 291 86 22 chr20 39295453 39295731 -32858151 + L2 LINE L2 2715 3004 -268 691 249 111 0 chr20 39295765 39295954 -32857928 - MIR SINE MIR -8 254 45 747 302 0 5 chr20 39296091 39296280 -32857602 - MIR SINE MIR -33 229 42 290 297 9 9 chr20 39296851 39296962 -32856920 + CT-rich Low_complexity Low_complexity 2 112 0 243 330 32 0 chr20 39297023 39297117 -32856765 + MIR SINE MIR 79 175 -87 223 309 32 11 chr20 39297413 39297507 -32856375 + L3b LINE CR1 1300 1395 -188 250 349 128 0 chr20 39297545 39297654 -32856228 + L2 LINE L2 3148 3270 -2 195 237 0 0 chr20 39298130 39298168 -32855714 + MIR SINE MIR 31 68 -140 1478 289 34 2 chr20 39298241 39298649 -32855233 - LTR16A LTR ERVL -5 445 25 187 299 214 19 chr20 39298685 39298839 -32855043 - MIR SINE MIR -65 197 14 239 329 85 0 chr20 39298901 39298983 -32854899 + MIR3 SINE MIR 88 176 -32 227 208 42 0 chr20 39299136 39299184 -32854698 + MIR3 SINE MIR 152 201 -7 288 339 92 49 chr20 39300270 39300639 -32853243 + L2 LINE L2 2437 2821 -493 337 277 34 47 chr20 39300692 39300840 -32853042 + L2 LINE L2 2914 3059 -213 616 258 126 20 chr20 39300933 39301131 -32852751 + MIR SINE MIR 38 256 -6 1307 231 82 41 chr20 39301185 39301622 -32852260 - LTR16A1 LTR ERVL 0 457 3 499 331 59 66 chr20 39301729 39302034 -32851848 - L2 LINE L2 0 3272 2970 194 271 250 42 chr20 39302567 39302711 -32851171 + MIR3 SINE MIR 23 196 -12 343 327 25 19 chr20 39303197 39303359 -32850523 - MIR SINE MIR -98 164 2 546 240 200 20 chr20 39303446 39303646 -32850236 + MIR SINE MIR 20 255 -7 796 200 0 89 chr20 39304272 39304497 -32849385 + L2 LINE L2 3089 3293 -20 282 256 143 23 chr20 39304715 39304848 -32849034 + MIR SINE MIR 74 222 -40 342 0 0 0 chr20 39305124 39305162 -32848720 + (TG)n Simple_repeat Simple_repeat 1 38 0 442 225 33 86 chr20 39305627 39305778 -32848104 + MIR3 SINE MIR 50 192 -16 340 238 0 0 chr20 39306016 39306079 -32847803 - MIR SINE MIR -119 143 81 208 278 204 9 chr20 39306340 39306448 -32847434 - MIR SINE MIR -61 147 19 183 277 0 0 chr20 39306740 39306787 -32847095 - MIR3 SINE MIR -38 170 124 228 353 61 0 chr20 39306860 39306959 -32846923 - MIR SINE MIR -65 143 47 671 273 31 5 chr20 39306966 39307160 -32846722 + MLT1A2 LTR MaLR 171 369 -5 576 118 0 0 chr20 39307169 39307254 -32846628 + L1MD1 LINE L1 6090 6174 -68 386 236 0 22 chr20 39307255 39307344 -32846538 + MIR SINE MIR 58 144 -64 431 248 33 84 chr20 39307370 39307644 -32846238 + L1M4 LINE L1 2927 3186 -2960 615 306 115 54 chr20 39307678 39307992 -32845890 - L2 LINE L2 -2 3270 2938 589 289 14 0 chr20 39308060 39308202 -32845680 - MIR SINE MIR -81 181 38 237 251 47 94 chr20 39309464 39309635 -32844247 + L2 LINE L2 2902 3064 -208 2487 62 0 0 chr20 39309639 39309965 -32843917 - AluY SINE Alu 0 326 1 1871 168 17 0 chr20 39309973 39310270 -32843612 - AluJb SINE Alu -10 302 1 452 257 105 35 chr20 39310309 39310480 -32843402 + MIR SINE MIR 1 183 -79 435 331 12 24 chr20 39310663 39310832 -32843050 + MIR3 SINE MIR 17 183 -25 367 241 36 36 chr20 39310931 39311043 -32842839 + MIR SINE MIR 80 191 -71 500 272 27 54 chr20 39311060 39311244 -32842638 - L2 LINE L2 -18 3295 3117 1443 174 17 55 chr20 39311247 39311570 -32842312 + AluJb SINE Alu 1 312 0 219 222 22 0 chr20 39311600 39311645 -32842237 - L2 LINE L2 -217 3055 3010 632 230 62 11 chr20 39311645 39311823 -32842059 - MLT1F1 LTR MaLR 0 567 381 593 301 52 48 chr20 39311866 39312175 -32841707 - MLT1F1 LTR MaLR -285 310 1 288 243 99 36 chr20 39312175 39312286 -32841596 - L2 LINE L2 -258 3014 2897 * 768 235 88 137 chr20 39312263 39313139 -32840743 - L2 LINE L2 -37 3276 2442 234 274 0 0 chr20 39313160 39313211 -32840671 - MIR SINE MIR -89 119 69 809 243 60 48 chr20 39313732 39313983 -32839899 + MIR SINE MIR 2 255 -7 662 130 0 8 chr20 39314342 39314465 -32839417 + (TCCA)n Simple_repeat Simple_repeat 3 124 0 452 171 9 0 chr20 39314517 39314628 -32839254 + (TCCA)n Simple_repeat Simple_repeat 4 115 0 213 366 56 56 chr20 39314730 39314891 -32838991 - L2 LINE L2 0 3272 3112 204 330 21 21 chr20 39315184 39315278 -32838604 - L3 LINE CR1 -65 1512 1419 674 272 27 16 chr20 39315388 39315572 -32838310 + MIR SINE MIR 16 201 -61 593 210 67 76 chr20 39315834 39315866 -32838016 - LTR33A LTR ERVL -170 353 322 1895 127 28 3 chr20 39315866 39316150 -32837732 - AluJb SINE Alu -21 291 1 593 210 67 76 chr20 39316150 39316341 -32837541 - LTR33A LTR ERVL -201 322 132 281 276 0 0 chr20 39316598 39316656 -32837226 + MIR SINE MIR 119 176 -86 336 291 0 0 chr20 39316693 39316772 -32837110 - L2 LINE L2 -47 3225 3147 368 172 0 0 chr20 39316782 39316846 -32837036 + MIR SINE MIR 187 250 -12 284 219 164 0 chr20 39316852 39316925 -32836957 - MER103 DNA DNA -79 87 3 267 197 66 53 chr20 39317237 39317313 -32836569 - L2 LINE L2 0 3272 3196 304 294 98 10 chr20 39317361 39317463 -32836419 - L2 LINE L2 -186 3086 2976 519 293 26 16 chr20 39317602 39317793 -32836089 + MIR SINE MIR 20 212 -50 372 232 0 23 chr20 39318284 39318381 -32835501 + MIR SINE MIR 63 157 -51 938 241 38 44 chr20 39318500 39318837 -32835045 - MLT1I LTR MaLR -23 386 82 1972 114 0 4 chr20 39318922 39319184 -32834698 + AluSx SINE Alu 21 281 -31 2121 151 0 0 chr20 39319191 39319490 -32834392 + AluSx SINE Alu 5 303 -9 1639 107 5 0 chr20 39319584 39319799 -32834083 - AluSx SINE Alu -77 235 20 508 258 15 38 chr20 39319979 39320111 -32833771 - L2 LINE L2 0 3272 3144 525 198 12 125 chr20 39320432 39320488 -32833394 + L1ME1 LINE L1 6004 6065 -269 2219 114 0 0 chr20 39320488 39320777 -32833105 + AluSx SINE Alu 1 289 -23 525 198 12 125 chr20 39320777 39320914 -32832968 + L1ME1 LINE L1 6065 6333 -1 250 233 6 11 chr20 39320955 39321043 -32832839 - MIR SINE MIR -86 122 36 366 86 0 26 chr20 39321307 39321396 -32832486 - Alu SINE Alu -1 299 244 420 295 35 9 chr20 39321601 39321757 -32832125 - MIR SINE MIR -32 176 15 507 311 75 95 chr20 39322342 39322647 -32831235 - L2 LINE L2 -1 3271 2973 774 230 127 29 chr20 39322693 39322907 -32830975 + MIR SINE MIR 14 247 -15 524 251 99 35 chr20 39323110 39323281 -32830601 - MIR SINE MIR -79 183 2 632 244 87 6 chr20 39323555 39323727 -32830155 + MIR SINE MIR 77 262 0 236 247 24 47 chr20 39323824 39323909 -32829973 + MIR SINE MIR 61 143 -65 237 237 69 99 chr20 39324530 39324661 -32829221 + MIR SINE MIR 24 150 -112 298 247 147 0 chr20 39324676 39324792 -32829090 + L1ME1 LINE L1 5560 5613 -551 971 168 0 0 chr20 39324793 39324960 -32828922 - AluSg/x SINE Alu -9 301 135 1471 244 14 0 chr20 39324960 39325313 -32828569 + L1ME1 LINE L1 5697 6054 -112 436 154 0 0 chr20 39325313 39325391 -32828491 - FLAM_C SINE Alu -4 139 62 815 144 0 0 chr20 39325391 39325516 -32828366 - AluSg/x SINE Alu -54 256 132 349 200 25 0 chr20 39325567 39325647 -32828235 + L1MB7 LINE L1 6103 6184 0 2317 114 16 24 chr20 39325702 39326078 -32827804 - THE1C LTR MaLR -2 373 1 10741 109 22 30 chr20 39326107 39327699 -32826183 - THE1C-int LTR MaLR 0 1580 1 2085 133 27 29 chr20 39327699 39328075 -32825807 - THE1C LTR MaLR 0 375 1 1486 182 7 11 chr20 39328075 39328355 -32825527 - AluJb SINE Alu -33 279 1 707 238 70 48 chr20 39328376 39328649 -32825233 - L1ME3 LINE L1 0 6162 5884 475 320 89 54 chr20 39328665 39329221 -32824661 + L2 LINE L2 2690 3272 0 1945 147 3 19 chr20 39329337 39329651 -32824231 + AluSq SINE Alu 1 309 -4 2383 223 51 19 chr20 39329799 39330386 -32823496 - L1ME3 LINE L1 0 6162 5557 259 217 14 145 chr20 39330970 39331023 -32822859 + L1ME4a LINE L1 5696 5754 -367 2343 97 0 0 chr20 39331023 39331332 -32822550 + AluSx SINE Alu 3 311 -1 259 217 14 145 chr20 39331332 39331416 -32822466 + L1ME4a LINE L1 5754 5815 -306 2347 211 24 6 chr20 39331420 39331872 -32822010 + L1MD3 LINE L1 7481 7944 -51 1969 118 6 13 chr20 39331872 39332186 -32821696 - AluSq SINE Alu -1 312 1 2347 211 24 6 chr20 39332186 39332231 -32821651 + L1MD3 LINE L1 7944 7987 -8 2134 212 41 0 chr20 39332253 39332715 -32821167 - Charlie4a DNA MER1_type 0 508 28 236 267 35 43 chr20 39332756 39332872 -32821010 + L1ME4a LINE L1 5835 5949 -172 343 281 125 0 chr20 39332889 39332985 -32820897 - L2 LINE L2 -4 3268 3161 2086 125 0 0 chr20 39333033 39333337 -32820545 - AluSx SINE Alu -1 311 8 850 312 56 31 chr20 39333427 39333818 -32820064 - L3 LINE CR1 -195 1382 982 5876 156 53 101 chr20 39333829 39333869 -32820013 - L1MB8 LINE L1 0 6178 6138 2093 205 29 50 chr20 39333869 39334385 -32819497 - MLT1D LTR MaLR 0 505 1 5876 156 53 101 chr20 39334385 39334847 -32819035 - L1MB8 LINE L1 -40 6138 5655 2292 109 0 0 chr20 39334847 39335160 -32818722 - AluSq SINE Alu 0 313 1 5876 156 53 101 chr20 39335160 39335575 -32818307 - L1MB8 LINE L1 -523 5655 5221 4251 92 4 0 chr20 39335575 39336127 -32817755 - MER41A LTR ERV1 0 554 1 5876 156 53 101 chr20 39336127 39336195 -32817687 - L1MB8 LINE L1 -957 5221 5151 1898 133 19 7 chr20 39336195 39336503 -32817379 - AluSx SINE Alu 0 312 1 5876 156 53 101 chr20 39336503 39336709 -32817173 - L1MB8 LINE L1 -1027 5151 4937 2284 92 75 26 chr20 39336709 39337056 -32816826 - THE1B LTR MaLR 0 364 1 5876 156 53 101 chr20 39337056 39337737 -32816145 - L1MB8 LINE L1 -1241 4937 4225 777 120 60 0 chr20 39337737 39337854 -32816028 - AluJo SINE Alu -178 134 11 5876 156 53 101 chr20 39337854 39338173 -32815709 - L1MB8 LINE L1 -1953 4225 4024 1875 140 3 10 chr20 39338173 39338465 -32815417 - AluSx SINE Alu -22 290 1 5876 156 53 101 chr20 39338465 39338802 -32815080 - L1MB8 LINE L1 -2154 4024 3672 227 314 68 51 chr20 39338951 39339069 -32814813 + MIR SINE MIR 26 145 -63 346 186 144 0 chr20 39339291 39339384 -32814498 - MER5A DNA MER1_type -77 112 4 22 35 0 0 chr20 39339468 39339497 -32814385 + AT_rich Low_complexity Low_complexity 1 29 0 1053 152 0 12 chr20 39339592 39339763 -32814119 - AluSg/x SINE Alu -21 289 121 2253 86 0 0 chr20 39339986 39340276 -32813606 - AluSc SINE Alu -19 290 1 254 268 42 0 chr20 39340762 39340833 -32813049 + MIR SINE MIR 99 172 -90 2099 117 3 0 chr20 39340865 39341165 -32812717 + AluSx SINE Alu 1 301 -11 401 273 136 57 chr20 39341187 39341363 -32812519 + MIR SINE MIR 61 250 -12 201 213 0 0 chr20 39341462 39341509 -32812373 + CT-rich Low_complexity Low_complexity 3 49 0 238 163 23 0 chr20 39341943 39341986 -32811896 + MIR SINE MIR 81 124 -138 498 251 58 139 chr20 39343005 39343300 -32810582 + L2 LINE L2 2992 3262 -10 318 233 23 174 chr20 39343342 39343514 -32810368 + MIR SINE MIR 117 262 0 233 255 0 0 chr20 39343620 39343671 -32810211 - MIR SINE MIR -84 124 74 506 293 70 6 chr20 39343705 39343862 -32810020 + MIR SINE MIR 82 248 -14 198 293 136 68 chr20 39343959 39344283 -32809599 - L2 LINE L2 -8 3264 2919 269 269 43 43 chr20 39344319 39344412 -32809470 + L2 LINE L2 2934 3026 -246 706 213 131 15 chr20 39344555 39344919 -32808963 + LTR33A LTR ERVL 74 523 0 904 86 0 0 chr20 39345138 39345255 -32808627 + AluSg SINE Alu 1 117 -193 360 265 0 83 chr20 39345849 39345981 -32807901 - LTR16C LTR ERVL 0 491 371 785 293 19 60 chr20 39346417 39346626 -32807256 - L2 LINE L2 -1 3312 3119 2234 95 40 53 chr20 39346626 39346963 -32806919 + THE1C LTR MaLR 1 334 -41 2136 117 0 0 chr20 39346963 39347263 -32806619 - AluSg SINE Alu -10 300 1 2234 95 40 53 chr20 39347263 39347305 -32806577 + THE1C LTR MaLR 334 375 0 785 293 19 60 chr20 39347305 39347409 -32806473 - L2 LINE L2 -194 3119 3012 415 93 0 0 chr20 39349276 39349330 -32804552 + AluJ/FRAM SINE Alu 226 279 -33 396 0 0 0 chr20 39349330 39349374 -32804508 + (GA)n Simple_repeat Simple_repeat 1 44 0 1714 199 28 58 chr20 39349382 39349813 -32804069 + MLT1C LTR MaLR 43 460 -7 788 246 65 58 chr20 39349965 39350242 -32803640 + L2 LINE L2 2994 3272 0 392 308 23 8 chr20 39350887 39351017 -32802865 - MIR3 SINE MIR -67 141 10 2415 77 3 0 chr20 39351036 39351348 -32802534 + AluSq SINE Alu 1 313 0 285 303 35 35 chr20 39351398 39351540 -32802342 - L2 LINE L2 -181 3091 2950 1863 154 3 19 chr20 39351618 39351936 -32801946 - AluSq SINE Alu 0 313 1 433 277 63 13 chr20 39352008 39352125 -32801757 + MLT1L LTR MaLR 150 279 -336 1386 192 23 19 chr20 39352125 39352433 -32801449 - AluJb SINE Alu -3 309 1 433 277 63 13 chr20 39352433 39352474 -32801408 + MLT1L LTR MaLR 279 316 -299 314 317 150 22 chr20 39352541 39352721 -32801161 + MLT1L LTR MaLR 411 613 -2 635 98 11 11 chr20 39352744 39352836 -32801046 - MLT1A1 LTR MaLR -272 93 2 478 202 209 0 chr20 39352853 39352982 -32800900 + MIR SINE MIR 38 193 -69 2001 120 0 3 chr20 39353032 39353324 -32800558 + AluSg1 SINE Alu 1 291 -18 213 65 0 0 chr20 39353324 39353355 -32800527 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 2025 94 24 7 chr20 39354187 39354475 -32799407 - AluSq SINE Alu -15 298 6 1068 268 91 48 chr20 39354504 39354875 -32799007 - LTR16C LTR ERVL -2 489 93 2331 99 0 0 chr20 39354875 39355187 -32798695 + AluSx SINE Alu 1 312 0 1068 268 91 48 chr20 39355187 39355278 -32798604 - LTR16C LTR ERVL -398 93 7 1955 114 35 0 chr20 39355362 39355651 -32798231 - AluSx SINE Alu -13 299 1 1915 118 24 0 chr20 39355651 39355940 -32797942 - AluSx SINE Alu -16 296 1 23 0 0 0 chr20 39356061 39356084 -32797798 + AT_rich Low_complexity Low_complexity 1 23 0 1623 171 0 7 chr20 39356292 39356599 -32797283 - AluJb SINE Alu 0 305 1 329 241 36 18 chr20 39356669 39356781 -32797101 - L1ME4a LINE L1 -21 6100 5987 713 120 154 8 chr20 39356800 39356917 -32796965 - AluJo SINE Alu -177 135 2 266 203 0 25 chr20 39357015 39357094 -32796788 + GA-rich Low_complexity Low_complexity 1 77 0 921 139 46 0 chr20 39357761 39357912 -32795970 - AluJb SINE Alu -26 286 129 470 265 26 0 chr20 39358098 39358215 -32795667 + MER103 DNA DNA 3 122 -44 888 192 124 21 chr20 39358425 39358618 -32795264 - MLT1F LTR MaLR -9 533 321 * 2290 189 102 38 chr20 39358606 39359104 -32794778 + MLT1F LTR MaLR 13 542 0 1112 137 112 0 chr20 39359458 39359655 -32794227 - AluJb SINE Alu -12 300 82 653 204 50 45 chr20 39359827 39360047 -32793835 - L1MC5 LINE L1 -76 7885 7665 246 269 148 19 chr20 39360287 39360395 -32793487 + MIR SINE MIR 37 158 -104 1566 182 0 20 chr20 39361022 39361319 -32792563 - AluJo SINE Alu -21 291 1 682 281 69 39 chr20 39361399 39361705 -32792177 - L2 LINE L2 0 3313 2999 729 134 116 17 chr20 39361811 39361983 -32791899 - MER53 DNA DNA 0 189 1 313 322 33 8 chr20 39362062 39362183 -32791699 + L2 LINE L2 2924 3047 -266 1878 119 29 23 chr20 39362374 39362684 -32791198 - AluJo SINE Alu 0 312 1 526 282 31 0 chr20 39362717 39362880 -32791002 - MIR SINE MIR -21 241 74 194 328 0 0 chr20 39362857 39362915 -32790967 + MIR SINE MIR 116 173 -89 * 481 252 37 0 chr20 39362924 39363031 -32790851 + L2 LINE L2 3190 3300 -13 207 0 0 0 chr20 39363031 39363054 -32790828 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 329 198 37 160 chr20 39363055 39363157 -32790725 - MIR SINE MIR -64 144 31 579 222 4 122 chr20 39363157 39363189 -32790693 + MER63A DNA MER1_type 5 39 -1649 1584 157 70 0 chr20 39363189 39363306 -32790576 + AluJb SINE Alu 1 108 -204 258 32 0 0 chr20 39363306 39363337 -32790545 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1584 157 70 0 chr20 39363337 39363506 -32790376 + AluJb SINE Alu 108 307 -5 579 222 4 122 chr20 39363506 39363703 -32790179 + MER63A DNA MER1_type 39 207 -3 329 198 37 160 chr20 39363703 39363763 -32790119 - MIR SINE MIR -177 31 1 2162 91 3 3 chr20 39363793 39364090 -32789792 - AluSc SINE Alu -12 297 1 225 246 0 141 chr20 39364167 39364256 -32789626 + L2 LINE L2 2691 2754 -560 2089 102 34 3 chr20 39364256 39364549 -32789333 - AluSx SINE Alu -10 302 1 225 246 0 141 chr20 39364549 39364601 -32789281 + L2 LINE L2 2754 2812 -502 * 542 278 88 42 chr20 39364595 39364879 -32789003 - L2 LINE L2 -21 3292 2996 36 23 0 0 chr20 39365011 39365054 -32788828 + AT_rich Low_complexity Low_complexity 1 43 0 207 287 26 61 chr20 39365218 39365333 -32788549 - MIR3 SINE MIR -42 166 56 * 286 246 90 67 chr20 39365248 39365346 -32788536 + MIR3 SINE MIR 10 113 -95 1214 137 164 55 chr20 39365346 39365638 -32788244 - MER33 DNA MER1_type 0 324 1 286 246 90 67 chr20 39365638 39365673 -32788209 + MIR3 SINE MIR 113 146 -62 473 309 25 25 chr20 39366436 39366598 -32787284 + MIR SINE MIR 47 208 -54 293 258 62 41 chr20 39366720 39366817 -32787065 - MIR SINE MIR -76 132 34 832 160 24 173 chr20 39366876 39367129 -32786753 + MER33 DNA MER1_type 1 180 -2405 1525 181 50 0 chr20 39367129 39367411 -32786471 - AluJo SINE Alu -10 302 7 832 160 24 173 chr20 39367411 39367538 -32786344 + MER33 DNA MER1_type 180 324 0 815 250 52 16 chr20 39367538 39367790 -32786092 + MIR SINE MIR 2 262 0 928 271 77 58 chr20 39368019 39368218 -32785664 - L2 LINE L2 0 3313 3119 1120 152 28 121 chr20 39368218 39368359 -32785523 + MER33 DNA MER1_type 2 155 -2430 2328 81 3 0 chr20 39368359 39368666 -32785216 - AluSp SINE Alu -5 308 1 1120 152 28 121 chr20 39368666 39368823 -32785059 + MER33 DNA MER1_type 155 264 -2321 2269 104 0 3 chr20 39368823 39369131 -32784751 + AluSp SINE Alu 1 307 -6 1120 152 28 121 chr20 39369131 39369186 -32784696 + MER33 DNA MER1_type 264 323 -1 928 271 77 58 chr20 39369186 39369521 -32784361 - L2 LINE L2 -194 3119 2772 321 355 43 7 chr20 39369520 39369658 -32784224 - MIR3 SINE MIR -28 180 38 * 355 330 96 0 chr20 39369672 39369860 -32784022 - MIR SINE MIR -56 206 1 1876 168 0 0 chr20 39370687 39370997 -32782885 + AluJb SINE Alu 1 310 -2 808 226 45 6 chr20 39371062 39371239 -32782643 - MIR SINE MIR -77 185 2 444 302 62 26 chr20 39371239 39371426 -32782456 - MIR SINE MIR -21 241 48 446 145 72 0 chr20 39371624 39371707 -32782175 - MER5A DNA MER1_type -68 121 33 502 234 17 15 chr20 39371830 39371962 -32781920 + MIR3 SINE MIR 65 202 -6 550 305 12 36 chr20 39372026 39372193 -32781689 + MIR3 SINE MIR 30 192 -16 443 366 49 9 chr20 39373044 39373268 -32780614 - L1MC4a LINE L1 -1903 5905 5673 768 168 0 46 chr20 39373973 39374104 -32779778 - FLAM_C SINE Alu -8 125 1 196 369 0 0 chr20 39374734 39374799 -32779083 + L2 LINE L2 3208 3272 0 1259 183 186 3 chr20 39375018 39375329 -32778553 - L1MD3 LINE L1 -10 7985 7618 2276 94 27 0 chr20 39375701 39376000 -32777882 - AluSp SINE Alu -6 307 1 210 288 23 141 chr20 39376096 39376273 -32777609 - L2 LINE L2 -89 3183 3028 1814 161 14 0 chr20 39376360 39376646 -32777236 + AluJo SINE Alu 5 294 -18 780 204 20 146 chr20 39377039 39377333 -32776549 + MIR SINE MIR 4 260 -2 22 0 0 0 chr20 39377385 39377407 -32776475 + AT_rich Low_complexity Low_complexity 1 22 0 15575 122 45 9 chr20 39377843 39379852 -32774030 - Tigger1 DNA MER2_type -2 2416 480 204 40 0 0 chr20 39379852 39379877 -32774005 + (GA)n Simple_repeat Simple_repeat 1 25 0 15575 122 45 9 chr20 39379877 39380109 -32773773 - Tigger1 DNA MER2_type -1938 480 258 1821 150 52 0 chr20 39380109 39380395 -32773487 - AluJb SINE Alu -11 301 1 15575 122 45 9 chr20 39380395 39380485 -32773397 - Tigger1 DNA MER2_type -2160 258 1 2356 90 3 0 chr20 39380780 39381079 -32772803 + AluSc SINE Alu 1 300 -9 273 229 131 72 chr20 39381843 39381991 -32771891 - MIR3 SINE MIR -43 165 9 912 290 116 48 chr20 39383332 39383958 -32769924 - L2 LINE L2 -1 3312 2654 564 302 23 0 chr20 39385785 39385957 -32767925 - MIR SINE MIR -24 238 63 236 348 62 5 chr20 39386062 39386216 -32767666 + L2 LINE L2 3072 3312 -1 187 267 0 0 chr20 39386544 39386589 -32767293 - L2 LINE L2 0 3313 3269 278 242 198 11 chr20 39386808 39386899 -32766983 - MIR SINE MIR -135 127 20 463 301 42 42 chr20 39387146 39387359 -32766523 + MIR SINE MIR 41 253 -9 7100 56 6 33 chr20 39389530 39390578 -32763304 - SVA Other Other -629 1386 433 302 230 180 30 chr20 39390851 39390951 -32762931 + MIR3 SINE MIR 44 158 -50 1633 161 13 30 chr20 39391753 39391937 -32761945 - AluJb SINE Alu -1 311 132 2282 81 0 17 chr20 39391937 39392251 -32761631 - AluY SINE Alu 0 311 1 1633 161 13 30 chr20 39392251 39392371 -32761511 - AluJb SINE Alu -180 132 12 26 30 0 0 chr20 39392413 39392446 -32761436 + AT_rich Low_complexity Low_complexity 1 33 0 342 346 53 60 chr20 39392695 39392978 -32760904 - L2 LINE L2 -25 3247 2967 205 346 124 7 chr20 39393288 39393441 -32760441 - L3 LINE CR1 -1108 469 299 647 271 80 44 chr20 39393726 39394086 -32759796 - L1ME LINE L1 -469 5701 5325 2019 139 0 0 chr20 39394115 39394448 -32759434 + AluSx SINE Alu 1 333 0 184 370 43 22 chr20 39394633 39394725 -32759157 - MIR SINE MIR -94 114 21 190 230 95 95 chr20 39394785 39394859 -32759023 + L2 LINE L2 3199 3272 0 222 94 0 0 chr20 39395648 39395680 -32758202 - MIR SINE MIR -74 188 157 239 346 47 19 chr20 39396356 39396567 -32757315 + L3 LINE CR1 1317 1533 -44 1957 142 20 3 chr20 39396832 39397128 -32756754 - AluJo SINE Alu -9 303 3 2035 125 3 3 chr20 39397224 39397519 -32756363 - AluSq SINE Alu -18 295 1 2144 135 0 0 chr20 39397623 39397926 -32755956 + AluSx SINE Alu 1 303 -9 335 331 73 16 chr20 39397981 39398105 -32755777 - MIR SINE MIR -110 152 22 270 219 83 83 chr20 39398376 39398472 -32755410 + MIR3 SINE MIR 89 184 -24 1581 162 70 7 chr20 39400026 39400342 -32753540 + MER33 DNA MER1_type 1 318 -6 351 266 138 9 chr20 39400347 39400456 -32753426 + L2 LINE L2 3150 3272 0 287 352 32 0 chr20 39402395 39402520 -32751362 - MIR3 SINE MIR -68 140 12 799 212 0 0 chr20 39402617 39402749 -32751133 + FLAM_A SINE Alu 1 132 -1 204 327 80 9 chr20 39402768 39402881 -32751001 + MIR3 SINE MIR 1 121 -87 24 32 0 0 chr20 39402881 39402912 -32750970 + AT_rich Low_complexity Low_complexity 1 31 0 5660 140 27 14 chr20 39402913 39403160 -32750722 - L1MA7 LINE L1 0 6291 6049 2553 57 3 0 chr20 39403160 39403456 -32750426 - AluSp SINE Alu -16 297 1 5660 140 27 14 chr20 39403456 39404164 -32749718 - L1MA7 LINE L1 -242 6049 5323 1003 97 0 8 chr20 39404620 39404754 -32749128 - AluJb SINE Alu -179 133 1 353 286 36 0 chr20 39405038 39405150 -32748732 + MIR SINE MIR 85 200 -62 191 309 69 106 chr20 39405223 39405440 -32748442 - L2 LINE L2 -213 3059 2851 1063 260 91 44 chr20 39405455 39405862 -32748020 + L2 LINE L2 2888 3313 0 210 71 0 0 chr20 39407123 39407151 -32746731 + (TCCCC)n Simple_repeat Simple_repeat 3 30 0 238 235 0 0 chr20 39407155 39407206 -32746676 - L2 LINE L2 -1 3271 3221 196 244 37 49 chr20 39407270 39407352 -32746530 - L2 LINE L2 -473 2841 2761 438 274 0 0 chr20 39408180 39408264 -32745618 - MER58 DNA MER1_type -2336 84 1 234 159 45 0 chr20 39408411 39408455 -32745427 + L2 LINE L2 3268 3313 0 1684 126 77 0 chr20 39408465 39408712 -32745170 - AluSx SINE Alu -15 297 32 2272 105 0 3 chr20 39408863 39409169 -32744713 + AluY SINE Alu 1 305 -6 1558 260 85 30 chr20 39409498 39410029 -32743853 - MER68 LTR ERV1 0 562 3 604 236 76 0 chr20 39410146 39410303 -32743579 + MIR SINE MIR 89 257 -5 258 381 42 18 chr20 39410655 39410823 -32743059 - L2 LINE L2 -224 3048 2877 351 0 0 0 chr20 39411000 39411039 -32742843 + (TG)n Simple_repeat Simple_repeat 2 40 0 804 284 128 25 chr20 39411208 39411616 -32742266 - L1MC4a LINE L1 -1897 5911 5462 219 306 149 8 chr20 39411624 39411745 -32742137 + L2 LINE L2 3115 3252 -20 366 179 30 0 chr20 39412523 39412590 -32741292 - Charlie1 DNA MER1_type -4 2757 2689 * 1342 147 16 52 chr20 39412587 39412838 -32741044 - Charlie1 DNA MER1_type -2519 242 1 299 214 43 0 chr20 39413284 39413354 -32740528 - MIR SINE MIR -13 249 177 425 247 34 0 chr20 39413518 39413607 -32740275 + L2 LINE L2 3209 3300 -13 265 262 12 34 chr20 39413605 39413696 -32740186 - MIR SINE MIR -110 98 20 * 343 286 161 6 chr20 39413847 39414008 -32739874 - L3 LINE CR1 -11 1566 1381 253 311 107 0 chr20 39414032 39414135 -32739747 - L3 LINE CR1 -385 1192 1079 197 377 13 0 chr20 39414242 39414319 -32739563 - L2 LINE L2 -7 3265 3188 531 319 20 54 chr20 39414400 39414698 -32739184 - L3 LINE CR1 -677 900 613 2168 131 0 0 chr20 39414725 39415022 -32738860 - AluSx SINE Alu -12 300 4 297 304 87 54 chr20 39415393 39415784 -32738098 + L1ME LINE L1 4628 5031 -1115 557 278 176 13 chr20 39416060 39416440 -32737442 + L1ME LINE L1 5351 5816 -305 549 237 17 40 chr20 39416454 39416627 -32737255 + MER117 DNA MER1_type 1 169 -28 244 257 81 14 chr20 39417269 39417343 -32736539 - L2 LINE L2 -55 3258 3180 865 198 219 50 chr20 39417374 39417615 -32736267 - MIR SINE MIR 0 262 1 281 248 89 30 chr20 39418962 39419017 -32734865 + L2 LINE L2 3204 3254 -59 2012 152 10 13 chr20 39419017 39419326 -32734556 + AluSx SINE Alu 1 308 -4 281 248 89 30 chr20 39419326 39419371 -32734511 + L2 LINE L2 3254 3310 -3 1327 165 39 31 chr20 39419496 39419756 -32734126 - AluJo SINE Alu -8 304 43 280 271 94 12 chr20 39419772 39419857 -32734025 + MIR SINE MIR 171 262 0 248 297 0 0 chr20 39420373 39420437 -32733445 - L2 LINE L2 -4 3268 3205 1592 144 37 9 chr20 39420494 39420818 -32733064 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr20 39423123 39423145 -32730737 + (TAA)n Simple_repeat Simple_repeat 1 22 0 396 309 10 36 chr20 39425651 39425816 -32728066 - MIR SINE MIR -52 210 46 298 333 46 0 chr20 39425851 39425938 -32727944 - MIR SINE MIR -61 147 57 987 113 0 0 chr20 39426209 39426342 -32727540 - FLAM_C SINE Alu 0 133 1 183 80 0 0 chr20 39426372 39426397 -32727485 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 2205 118 3 0 chr20 39426733 39427020 -32726862 - AluSx SINE Alu -16 296 9 329 197 76 0 chr20 39428185 39428251 -32725631 - MIR3 SINE MIR -43 165 95 198 0 0 0 chr20 39428322 39428344 -32725538 + (TC)n Simple_repeat Simple_repeat 1 22 0 333 125 0 0 chr20 39428350 39428406 -32725476 + (TG)n Simple_repeat Simple_repeat 1 56 0 188 108 0 27 chr20 39428503 39428540 -32725342 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 2030 134 0 40 chr20 39428551 39428872 -32725010 - AluJo SINE Alu -4 308 1 268 255 221 35 chr20 39429818 39429963 -32723919 - MIR SINE MIR -70 192 21 284 248 59 20 chr20 39430711 39430812 -32723070 + MER5A DNA MER1_type 22 126 -63 26 0 0 0 chr20 39431542 39431568 -32722314 + AT_rich Low_complexity Low_complexity 1 26 0 736 258 58 11 chr20 39432495 39432685 -32721197 + MIR SINE MIR 63 261 -1 187 233 0 23 chr20 39432697 39432740 -32721142 + MIR SINE MIR 216 257 -5 605 300 135 30 chr20 39433478 39434082 -32719800 - L2 LINE L2 -1 3312 2626 293 328 84 0 chr20 39435658 39435777 -32718105 + MIR3 SINE MIR 34 162 -46 280 309 66 79 chr20 39435821 39435973 -32717909 - L2 LINE L2 0 3272 3123 254 191 0 0 chr20 39436087 39436129 -32717753 - MIR SINE MIR -113 149 108 186 385 24 0 chr20 39436363 39436446 -32717436 + MIR SINE MIR 42 126 -82 421 324 28 45 chr20 39436789 39436968 -32716914 + MIR SINE MIR 22 197 -65 313 304 112 53 chr20 39438295 39438801 -32715081 - L2 LINE L2 -18 3254 2717 291 271 145 29 chr20 39440396 39440484 -32713398 - L1ME LINE L1 -317 5873 5797 1825 127 54 30 chr20 39440484 39440685 -32713197 + MER44D DNA MER2_type 1 196 -2295 2367 99 0 13 chr20 39440685 39440999 -32712883 - AluSx SINE Alu -2 310 1 1825 127 54 30 chr20 39440999 39441128 -32712754 + MER44D DNA MER2_type 196 609 0 291 271 145 29 chr20 39441128 39441246 -32712636 - L1ME LINE L1 -393 5797 5643 342 277 122 43 chr20 39441294 39441482 -32712400 - L1ME LINE L1 -2338 5539 5364 356 247 52 21 chr20 39442928 39443025 -32710857 + MIR SINE MIR 48 147 -115 2780 227 58 30 chr20 39443171 39443924 -32709958 - L1MEc LINE L1 -2962 3253 2499 2576 93 8 3 chr20 39443924 39444277 -32709605 - THE1A LTR MaLR 0 355 1 2780 227 58 30 chr20 39444277 39444615 -32709267 - L1MEc LINE L1 -3716 2499 2172 906 133 0 13 chr20 39444619 39444770 -32709112 - L1MA10 LINE L1 -10 6324 6176 1193 176 27 0 chr20 39444780 39445069 -32708813 - L1MB1 LINE L1 -70 6119 5782 654 286 6 6 chr20 39445069 39445237 -32708645 - MER8 DNA MER2_type 0 239 72 199 311 87 29 chr20 39445519 39445622 -32708260 - MIR SINE MIR -108 154 46 557 306 59 50 chr20 39446367 39446954 -32706928 + L1ME2 LINE L1 5284 5888 -276 24 0 0 0 chr20 39447127 39447151 -32706731 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr20 39447314 39447341 -32706541 + AT_rich Low_complexity Low_complexity 1 27 0 756 212 18 0 chr20 39447490 39447660 -32706222 - L1MB7 LINE L1 -164 6020 5848 * 3764 180 31 83 chr20 39447657 39448781 -32705101 + L1MB3 LINE L1 4871 5905 -278 234 0 0 0 chr20 39448781 39448807 -32705075 + (CA)n Simple_repeat Simple_repeat 1 26 0 3764 180 31 83 chr20 39448807 39449072 -32704810 + L1MB3 LINE L1 5905 6182 -1 1703 195 36 3 chr20 39449440 39449773 -32704109 - MER2 DNA MER2_type 0 344 1 265 231 191 4 chr20 39450025 39450250 -32703632 + HAL1 LINE L1 996 1262 -1245 404 294 128 38 chr20 39450349 39450584 -32703298 - HAL1 LINE L1 -1139 1368 1113 28 29 0 0 chr20 39451635 39451670 -32702212 + AT_rich Low_complexity Low_complexity 1 35 0 583 217 107 122 chr20 39451716 39452126 -32701756 - MLT1J LTR MaLR -3 508 105 938 214 114 23 chr20 39452376 39452727 -32701155 - L1MB8 LINE L1 -38 6140 5758 32 43 0 0 chr20 39452736 39452782 -32701100 + AT_rich Low_complexity Low_complexity 1 46 0 1081 202 83 12 chr20 39452887 39453140 -32700742 + MLT1F LTR MaLR 267 537 -5 2996 147 6 23 chr20 39453466 39453990 -32699892 - L1PA16 LINE L1 0 6166 5652 274 286 1 0 chr20 39454258 39454357 -32699525 + L1 LINE L1 4891 4990 -1156 273 180 49 0 chr20 39455791 39455852 -32698030 - MIR SINE MIR -55 207 144 859 237 101 9 chr20 39456287 39456515 -32697367 + MLT1G LTR MaLR 32 280 -310 222 37 0 0 chr20 39456686 39456713 -32697169 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1030 118 88 53 chr20 39456898 39457126 -32696756 - MLT2A2 LTR ERVL 0 453 218 1330 221 40 24 chr20 39457232 39457607 -32696275 - MLT1D-int LTR MaLR -990 381 1 2276 189 12 43 chr20 39457608 39458122 -32695760 - MLT1D LTR MaLR -1 504 7 896 267 64 17 chr20 39458125 39458421 -32695461 + LTR16C LTR ERVL 181 490 -1 698 182 0 0 chr20 39458601 39458711 -32695171 + FLAM_A SINE Alu 16 125 -17 1079 187 23 14 chr20 39458814 39459028 -32694854 + MER20 DNA MER1_type 4 219 0 1116 149 28 102 chr20 39459512 39459834 -32694048 + L1 LINE L1 4427 4724 -1422 973 270 32 83 chr20 39460934 39461818 -32692064 - L1MC4 LINE L1 0 8042 7204 294 109 0 0 chr20 39461848 39461894 -32691988 + L1MC4 LINE L1 7093 7138 -904 755 255 48 44 chr20 39462100 39462351 -32691531 - MIR SINE MIR -9 253 2 2384 66 10 3 chr20 39463596 39463898 -32689984 - AluY SINE Alu -7 304 1 321 351 30 8 chr20 39463911 39464042 -32689840 + MIR3 SINE MIR 32 165 -43 1190 244 19 22 chr20 39464518 39464837 -32689045 - MLT1I LTR MaLR -8 401 84 471 206 0 0 chr20 39465243 39465335 -32688547 + MER34C LTR ERV1 1 92 -493 1019 161 55 46 chr20 39467175 39467255 -32686627 - Tigger5 DNA MER2_type 0 2323 2245 782 212 18 12 chr20 39467255 39467420 -32686462 + FRAM SINE Alu 1 166 0 1019 161 55 46 chr20 39467420 39467557 -32686325 - Tigger5 DNA MER2_type -78 2245 2104 1218 151 17 17 chr20 39467557 39467789 -32686093 + Charlie3 DNA MER1_type 1 232 -2478 440 141 0 0 chr20 39467791 39467855 -32686027 + Charlie3 DNA MER1_type 178 241 -2469 218 405 14 27 chr20 39468099 39468247 -32685635 - L2 LINE L2 0 3272 3127 336 216 0 0 chr20 39471017 39471114 -32682768 + (CATTC)n Simple_repeat Simple_repeat 1 97 0 21 0 0 0 chr20 39471750 39471771 -32682111 + AT_rich Low_complexity Low_complexity 1 21 0 13265 137 23 3 chr20 39472607 39474809 -32679073 - Tigger1 DNA MER2_type -172 2246 1 423 211 73 8 chr20 39475668 39475791 -32678091 + Charlie8 DNA MER1_type 84 214 -2203 1460 152 33 23 chr20 39475792 39476095 -32677787 + L1MB8 LINE L1 5856 6161 -17 452 346 53 5 chr20 39477165 39477373 -32676509 - MIR SINE MIR -5 257 40 219 366 59 0 chr20 39478028 39478129 -32675753 + MIR SINE MIR 30 136 -72 249 33 0 0 chr20 39478190 39478220 -32675662 + (CA)n Simple_repeat Simple_repeat 2 31 0 1741 207 22 18 chr20 39478792 39479237 -32674645 + L1MA9 LINE L1 5830 6276 -36 194 293 121 0 chr20 39480985 39481043 -32672839 + L2 LINE L2 3129 3193 -79 241 381 79 14 chr20 39481083 39481222 -32672660 + MIR3 SINE MIR 40 187 -21 324 196 0 0 chr20 39481318 39481374 -32672508 + Tigger5 DNA MER2_type 1 56 -2267 476 185 0 0 chr20 39481379 39481460 -32672422 + Tigger5 DNA MER2_type 2234 2314 -9 437 313 27 27 chr20 39481602 39481749 -32672133 + MIR SINE MIR 36 182 -80 1399 167 21 14 chr20 39482675 39482956 -32670926 - L1MA9 LINE L1 -439 5873 5591 4023 156 42 11 chr20 39482967 39483769 -32670113 - L1MA8 LINE L1 -1 6290 5464 459 331 78 9 chr20 39484181 39484580 -32669302 + MLT1K LTR MaLR 115 588 0 364 349 86 14 chr20 39484819 39485028 -32668854 + MIR SINE MIR 2 225 -37 702 205 17 36 chr20 39485037 39485253 -32668629 - L1M4 LINE L1 -3786 2360 2146 340 330 9 0 chr20 39486621 39486733 -32667149 + MIR SINE MIR 69 181 -81 383 299 15 15 chr20 39486789 39486923 -32666959 + MLT1H LTR MaLR 29 162 -387 255 224 45 0 chr20 39487089 39487156 -32666726 + MLT1H LTR MaLR 479 548 -1 723 189 11 89 chr20 39487469 39487659 -32666223 - MER57A LTR ERV1 -1 402 228 1661 191 3 25 chr20 39489251 39489566 -32664316 - AluJo SINE Alu -4 308 1 448 313 102 12 chr20 39489732 39489898 -32663984 - MER5A DNA MER1_type -1 188 8 649 222 141 0 chr20 39492317 39492551 -32661331 + LTR50 LTR ERVL 8 274 -521 318 210 22 10 chr20 39492762 39492860 -32661022 + LTR50 LTR ERVL 425 795 0 2084 123 7 13 chr20 39492978 39493279 -32660603 - AluSx SINE Alu -13 299 1 181 268 0 0 chr20 39544148 39544189 -32609693 - L2 LINE L2 -90 3223 3183 180 347 28 14 chr20 39544545 39544617 -32609265 + L2 LINE L2 104 176 -3138 463 295 112 14 chr20 39544740 39545064 -32608818 + L2 LINE L2 237 646 -2668 681 298 217 13 chr20 39545064 39545511 -32608371 + L2 LINE L2 2423 2960 -354 267 331 25 38 chr20 39545523 39545680 -32608202 + L2 LINE L2 3097 3251 -62 628 208 54 0 chr20 39545692 39545822 -32608060 - MER5A DNA MER1_type -4 185 49 198 0 0 0 chr20 39545827 39545849 -32608033 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1064 178 104 107 chr20 39545902 39546268 -32607614 - MLT1A1 LTR MaLR 0 365 1 323 248 124 0 chr20 39547085 39547198 -32606684 + MER5B DNA MER1_type 52 178 0 2356 82 0 13 chr20 39547255 39547570 -32606312 - AluY SINE Alu 0 311 1 950 176 29 12 chr20 39547572 39547742 -32606140 - AluJb SINE Alu -9 303 131 227 284 40 14 chr20 39547742 39547816 -32606066 + MIR SINE MIR 79 154 -108 2007 138 3 3 chr20 39547947 39548245 -32605637 + AluJb SINE Alu 1 298 -14 282 261 0 0 chr20 39548503 39548572 -32605310 - MER117 DNA MER1_type -126 71 3 335 377 7 7 chr20 39548850 39548996 -32604886 - MIR SINE MIR -109 153 8 479 293 117 5 chr20 39550810 39551015 -32602867 - L1MC/D LINE L1 -2014 5794 5567 208 298 160 11 chr20 39551188 39551282 -32602600 - MIR SINE MIR -1 261 154 631 144 10 0 chr20 39551294 39551391 -32602491 - AluJ/FLAM SINE Alu -213 99 2 218 234 289 23 chr20 39551393 39551521 -32602361 - MIR SINE MIR -100 162 1 228 262 16 16 chr20 39552007 39552068 -32601814 - L2 LINE L2 -11 3302 3242 636 317 78 32 chr20 39552960 39553332 -32600550 - L2 LINE L2 -77 3236 2848 393 286 108 24 chr20 39553357 39553570 -32600312 - L2 LINE L2 -569 2745 2515 2149 120 20 0 chr20 39554190 39554491 -32599391 + AluSx SINE Alu 1 307 -5 264 289 135 17 chr20 39554566 39554734 -32599148 - MIR SINE MIR -18 244 44 2016 105 52 0 chr20 39554864 39555150 -32598732 + AluSq SINE Alu 1 301 -12 422 311 30 54 chr20 39555158 39555325 -32598557 - MIR SINE MIR -21 241 79 541 197 97 1 chr20 39555732 39555860 -32598022 + MIR SINE MIR 9 148 -60 443 356 86 29 chr20 39556529 39556903 -32596979 - L2 LINE L2 -24 3248 2854 267 326 63 37 chr20 39557013 39557203 -32596679 - L2 LINE L2 -3 3269 3075 361 333 47 0 chr20 39557505 39557655 -32596227 - MIR3 SINE MIR -38 170 14 182 294 88 0 chr20 39558277 39558345 -32595537 + L2 LINE L2 3177 3250 -63 576 285 21 112 chr20 39558378 39558545 -32595337 - L2 LINE L2 -37 3276 3095 1882 155 10 0 chr20 39558545 39558849 -32595033 + AluJo SINE Alu 1 307 -5 2031 103 18 4 chr20 39558857 39559169 -32594713 + AluSq SINE Alu 1 316 0 576 285 21 112 chr20 39559169 39559366 -32594516 - L2 LINE L2 -225 3088 2936 2179 108 3 7 chr20 39559864 39560170 -32593712 - AluSx SINE Alu -7 305 1 342 337 31 31 chr20 39560229 39560392 -32593490 - MIR SINE MIR -54 208 46 406 269 7 48 chr20 39560398 39560543 -32593339 + L1MC4 LINE L1 7738 7876 -166 283 340 9 28 chr20 39560702 39560808 -32593074 - MIR SINE MIR -92 170 67 343 283 26 62 chr20 39561591 39561753 -32592129 - MIR SINE MIR -65 143 27 261 295 162 0 chr20 39561796 39561901 -32591981 - L3 LINE CR1 -111 1466 1345 343 328 64 0 chr20 39561956 39562081 -32591801 - MIR3 SINE MIR -7 201 69 315 303 198 21 chr20 39562191 39562892 -32590990 - L2 LINE L2 -1 3271 2460 528 243 46 33 chr20 39563394 39563546 -32590336 - MIR SINE MIR -58 204 51 381 316 40 29 chr20 39563937 39564111 -32589771 + MIR3 SINE MIR 8 183 -25 547 288 16 78 chr20 39564145 39564232 -32589650 - MIR SINE MIR -3 259 168 2112 124 13 7 chr20 39564232 39564538 -32589344 + AluSx SINE Alu 1 308 -4 547 288 16 78 chr20 39564538 39564693 -32589189 - MIR SINE MIR -94 168 32 339 299 97 26 chr20 39564850 39565005 -32588877 + MIR SINE MIR 73 237 -25 332 287 147 0 chr20 39565012 39565141 -32588741 - MIR SINE MIR -67 195 48 264 59 0 0 chr20 39565200 39565234 -32588648 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 221 318 60 33 chr20 39565919 39566070 -32587812 - MIR3 SINE MIR -24 184 30 1002 174 0 11 chr20 39566112 39566290 -32587592 + FRAM SINE Alu 1 175 -1 268 370 48 7 chr20 39566437 39566583 -32587299 + MIR SINE MIR 111 262 0 * 663 225 102 5 chr20 39566579 39566788 -32587094 + MIR SINE MIR 31 256 -6 284 328 103 0 chr20 39566843 39566959 -32586923 - L2 LINE L2 -5 3267 3140 497 269 182 8 chr20 39566993 39567235 -32586647 - L2 LINE L2 -4 3309 3026 435 292 51 7 chr20 39567680 39567817 -32586065 - MIR SINE MIR -74 188 46 252 348 0 0 chr20 39567827 39567919 -32585963 + L3 LINE CR1 1379 1470 -107 242 325 38 0 chr20 39567968 39568048 -32585834 - L2 LINE L2 -62 3251 3169 1458 175 41 15 chr20 39568083 39568351 -32585531 + AluJo SINE Alu 1 275 -37 1128 85 11 6 chr20 39568368 39568398 -32585484 + (TTCC)n Simple_repeat Simple_repeat 1 207 0 1128 85 11 6 chr20 39568398 39568574 -32585308 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 1606 183 16 22 chr20 39568627 39568939 -32584943 - AluJb SINE Alu -1 311 2 400 278 194 5 chr20 39569244 39569429 -32584453 + MIR SINE MIR 22 252 -10 1895 139 6 16 chr20 39569496 39569819 -32584063 + MER33 DNA MER1_type 1 320 -4 556 174 97 45 chr20 39570149 39570304 -32583578 + MLT1B LTR MaLR 1 163 -211 2069 116 0 7 chr20 39570315 39570633 -32583249 + AluSx SINE Alu 1 316 0 211 209 23 0 chr20 39570653 39570696 -32583186 + CT-rich Low_complexity Low_complexity 4 47 0 766 252 5 19 chr20 39570697 39570903 -32582979 + MLT1B LTR MaLR 188 390 0 447 320 39 22 chr20 39571016 39571194 -32582688 + MIR3 SINE MIR 3 183 -25 1501 178 34 20 chr20 39571210 39571508 -32582374 + AluJo SINE Alu 1 302 -10 201 298 36 56 chr20 39572107 39572256 -32581626 + MER5A DNA MER1_type 20 184 -5 679 254 12 12 chr20 39572269 39572434 -32581448 + MER5B DNA MER1_type 1 165 -13 346 295 0 11 chr20 39572486 39572581 -32581301 - MIR SINE MIR -73 135 42 478 297 62 5 chr20 39574009 39574203 -32579679 + MIR SINE MIR 3 206 -56 335 322 70 0 chr20 39574257 39574400 -32579482 + MIR3 SINE MIR 1 154 -54 237 324 29 20 chr20 39574450 39574552 -32579330 + MIR SINE MIR 77 179 -83 * 1094 243 42 0 chr20 39574518 39574757 -32579125 - MIR SINE MIR 0 262 14 213 324 68 0 chr20 39574767 39574841 -32579041 + MIR SINE MIR 158 236 -26 2282 108 0 0 chr20 39575134 39575440 -32578442 - AluSg SINE Alu -4 306 1 185 305 0 51 chr20 39575697 39575756 -32578126 + MIR SINE MIR 42 97 -111 33 25 0 0 chr20 39576485 39576525 -32577357 + GC_rich Low_complexity Low_complexity 1 40 0 181 325 84 0 chr20 39576648 39576731 -32577151 + MIR SINE MIR 76 165 -97 363 182 0 0 chr20 39576837 39576914 -32576968 + (CA)n Simple_repeat Simple_repeat 1 77 0 461 325 95 26 chr20 39577084 39577315 -32576567 - MIR SINE MIR 0 262 16 226 106 43 0 chr20 39577643 39577690 -32576192 + GA-rich Low_complexity Low_complexity 2 50 0 21 0 0 0 chr20 39577932 39577953 -32575929 + GC_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr20 39578566 39578598 -32575284 + (CA)n Simple_repeat Simple_repeat 1 32 0 516 265 26 13 chr20 39579576 39579727 -32574155 - MIR SINE MIR -95 167 15 183 129 32 0 chr20 39580983 39581014 -32572868 + L2 LINE L2 3264 3295 -18 371 282 159 18 chr20 39581094 39581264 -32572618 - MIR SINE MIR -10 252 59 344 293 18 67 chr20 39581618 39581710 -32572172 - MER5B DNA MER1_type -22 156 74 1770 173 3 3 chr20 39581710 39582011 -32571871 - AluJo SINE Alu -3 309 9 344 293 18 67 chr20 39582011 39582082 -32571800 - MER5B DNA MER1_type -104 74 1 216 122 0 0 chr20 39582266 39582307 -32571575 + (CA)n Simple_repeat Simple_repeat 1 41 0 257 308 55 11 chr20 39582990 39583081 -32570801 - MIR3 SINE MIR -28 180 86 1860 146 33 0 chr20 39583143 39583444 -32570438 + AluJo SINE Alu 1 311 -1 693 296 20 5 chr20 39583471 39583670 -32570212 - MIR SINE MIR -30 232 31 189 74 0 0 chr20 39585064 39585091 -32568791 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 551 271 33 20 chr20 39585091 39585242 -32568640 - L2 LINE L2 -13 3300 3148 1870 158 3 19 chr20 39585244 39585560 -32568322 + AluJo SINE Alu 1 311 -1 1809 78 0 0 chr20 39585603 39585834 -32568048 + AluSg1 SINE Alu 1 231 -78 216 0 0 0 chr20 39585848 39585872 -32568010 + (A)n Simple_repeat Simple_repeat 1 24 0 314 318 0 0 chr20 39585939 39586024 -32567858 + L3 LINE CR1 1428 1512 -65 306 235 78 0 chr20 39586330 39586432 -32567450 + MIR3 SINE MIR 61 170 -38 288 130 0 0 chr20 39586491 39586537 -32567345 + (TG)n Simple_repeat Simple_repeat 1 46 0 453 315 103 0 chr20 39586648 39586832 -32567050 - MIR SINE MIR -44 218 16 268 188 8 31 chr20 39587422 39587550 -32566332 + CT-rich Low_complexity Low_complexity 2 126 0 250 143 0 0 chr20 39587699 39587741 -32566141 + L2 LINE L2 3231 3272 0 313 352 8 8 chr20 39587946 39588074 -32565808 - MIR SINE MIR -61 147 20 718 162 0 27 chr20 39588754 39588939 -32564943 + (TG)n Simple_repeat Simple_repeat 1 180 0 717 143 29 6 chr20 39588960 39589135 -32564747 + (TG)n Simple_repeat Simple_repeat 2 180 0 204 202 69 58 chr20 39589135 39589246 -32564636 + L2 LINE L2 2879 2990 -282 273 322 45 68 chr20 39589279 39589456 -32564426 - MIR3 SINE MIR -7 201 29 267 288 144 9 chr20 39590185 39590296 -32563586 - MIR SINE MIR -118 144 19 469 266 18 0 chr20 39591220 39591333 -32562549 + MIR SINE MIR 87 201 -61 1182 184 137 3 chr20 39591351 39591644 -32562238 + L1MB5 LINE L1 5810 6143 -26 2130 119 0 10 chr20 39591644 39591956 -32561926 + AluSg SINE Alu 1 309 -1 377 343 127 0 chr20 39592082 39592263 -32561619 - MIR SINE MIR -9 253 50 1290 242 30 8 chr20 39592967 39593331 -32560551 - MER113 DNA MER1_type? -145 376 5 235 280 51 59 chr20 39593331 39593449 -32560433 + L2 LINE L2 2950 3066 -206 234 154 0 0 chr20 39593559 39593598 -32560284 - MER91 DNA MER1_type -99 41 3 209 329 105 14 chr20 39593598 39593739 -32560143 + L2 LINE L2 3093 3246 -26 456 288 120 11 chr20 39594401 39594592 -32559290 + MIR SINE MIR 30 241 -21 493 320 63 11 chr20 39594771 39594946 -32558936 + MIR SINE MIR 20 203 -59 195 138 0 0 chr20 39595372 39595401 -32558481 + MIR SINE MIR 223 251 -11 233 56 0 28 chr20 39595401 39595437 -32558445 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 246 95 0 0 chr20 39595507 39595549 -32558333 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 554 273 127 48 chr20 39596096 39596411 -32557471 - L2 LINE L2 -16 3297 2958 901 130 0 0 chr20 39596443 39596574 -32557308 - FRAM SINE Alu 0 40 1 1805 172 91 0 chr20 39596637 39597021 -32556861 - L1MB3 LINE L1 -7 6176 5758 596 285 134 0 chr20 39597638 39597817 -32556065 - MIR SINE MIR -14 248 46 591 255 70 19 chr20 39598408 39598565 -32555317 + MIR SINE MIR 48 212 -50 1869 135 0 55 chr20 39598569 39598880 -32555002 + AluJo SINE Alu 3 296 -16 2406 83 0 3 chr20 39598883 39599196 -32554686 + AluSq SINE Alu 1 312 -1 180 0 0 0 chr20 39599289 39599309 -32554573 + (CAG)n Simple_repeat Simple_repeat 1 20 0 200 238 0 0 chr20 39599429 39599471 -32554411 + L3 LINE CR1 1422 1463 -114 351 167 15 15 chr20 39599597 39599663 -32554219 + MIR SINE MIR 82 147 -61 369 310 58 12 chr20 39599939 39600110 -32553772 - MIR3 SINE MIR -21 187 9 254 321 70 21 chr20 39600411 39600598 -32553284 + L2 LINE L2 2904 3099 -173 2197 113 0 0 chr20 39600673 39600974 -32552908 - AluSq SINE Alu -12 301 1 264 56 0 0 chr20 39601005 39601041 -32552841 + Alu SINE Alu 1 36 -266 855 104 97 0 chr20 39601041 39601175 -32552707 + AluSc SINE Alu 156 302 -7 559 90 13 0 chr20 39601178 39601256 -32552626 + MADE1 DNA Mariner 1 79 -1 249 303 109 25 chr20 39601290 39601411 -32552471 + MIR SINE MIR 20 148 -72 902 185 43 79 chr20 39601468 39601586 -32552296 + MER33 DNA MER1_type 30 151 -2434 2090 120 10 0 chr20 39601586 39601877 -32552005 - AluSx SINE Alu -18 294 1 902 185 43 79 chr20 39601877 39602061 -32551821 + MER33 DNA MER1_type 151 321 -3 182 338 26 0 chr20 39602214 39602291 -32551591 + MIR3 SINE MIR 81 159 -49 239 288 45 45 chr20 39602529 39602640 -32551242 + MIR SINE MIR 36 146 -116 291 132 13 145 chr20 39603055 39603080 -32550802 - L2 LINE L2 0 3313 3286 1761 158 3 20 chr20 39603080 39603377 -32550505 + AluJo SINE Alu 1 292 -20 291 132 13 145 chr20 39603377 39603427 -32550455 - L2 LINE L2 -27 3286 3248 601 253 20 113 chr20 39603441 39603469 -32550413 - L2 LINE L2 -186 3127 3098 986 188 64 30 chr20 39603469 39603671 -32550211 - MER3 DNA MER1_type 0 209 1 601 253 20 113 chr20 39603671 39603942 -32549940 - L2 LINE L2 -215 3098 2856 429 200 12 0 chr20 39603985 39604065 -32549817 - AluJb SINE Alu -43 269 189 353 159 0 16 chr20 39604066 39604129 -32549753 + AluJ/FLAM SINE Alu 2 63 -239 956 276 43 8 chr20 39604129 39604499 -32549383 - L2 LINE L2 -536 2778 2396 390 301 54 18 chr20 39605555 39605721 -32548161 - L2 LINE L2 -219 3053 2882 258 282 13 0 chr20 39605746 39605824 -32548058 - L2 LINE L2 -557 2757 2679 189 342 60 8 chr20 39606638 39606755 -32547127 - MIR3 SINE MIR -12 196 74 1371 242 66 8 chr20 39606995 39607388 -32546494 + LTR16C LTR ERVL 76 491 0 442 257 99 29 chr20 39607572 39607743 -32546139 - LTR16C LTR ERVL -304 187 5 393 310 118 15 chr20 39608630 39608833 -32545049 - MIR SINE MIR -37 225 2 219 240 0 0 chr20 39609109 39609159 -32544723 + (TG)n Simple_repeat Simple_repeat 2 51 0 531 285 186 49 chr20 39610055 39610441 -32543441 + L2 LINE L2 2828 3266 -6 2009 120 0 36 chr20 39610497 39610806 -32543076 - AluSq SINE Alu -13 300 3 305 315 19 0 chr20 39610960 39611068 -32542814 - Charlie8 DNA MER1_type -2273 144 35 183 125 62 0 chr20 39611314 39611346 -32542536 + MIR SINE MIR 41 74 -134 1727 126 12 0 chr20 39611555 39611802 -32542080 + AluSx SINE Alu 2 251 -61 191 36 36 0 chr20 39611838 39611866 -32542016 + (TAA)n Simple_repeat Simple_repeat 1 29 0 328 286 0 0 chr20 39611866 39611943 -32541939 - MIR SINE MIR -2 260 184 453 313 52 60 chr20 39612277 39612526 -32541356 - L2 LINE L2 -57 3215 2969 392 174 306 0 chr20 39613624 39613722 -32540160 + MIR SINE MIR 65 192 -70 1970 129 0 43 chr20 39613735 39614061 -32539821 + AluJo SINE Alu 1 312 0 22 0 0 0 chr20 39614150 39614172 -32539710 + AT_rich Low_complexity Low_complexity 1 22 0 210 216 0 59 chr20 39614354 39614405 -32539477 + L2 LINE L2 3265 3312 -1 394 288 27 18 chr20 39615151 39615262 -32538620 + MIR SINE MIR 32 143 -65 1596 156 60 26 chr20 39615275 39615627 -32538255 - THE1C LTR MaLR -11 364 1 550 270 214 34 chr20 39615706 39616061 -32537821 - L2 LINE L2 -1 3312 2894 229 248 88 18 chr20 39616513 39616626 -32537256 - L1MD3 LINE L1 0 7995 7875 1065 287 76 21 chr20 39616657 39616812 -32537070 + L1ME3 LINE L1 5679 5824 -338 2044 130 17 0 chr20 39616812 39617105 -32536777 + AluSq SINE Alu 1 298 -15 1065 287 76 21 chr20 39617105 39617410 -32536472 + L1ME3 LINE L1 5824 6162 0 856 138 6 60 chr20 39617545 39617567 -32536315 - AluJo/FRAM SINE Alu -1 311 289 2060 105 0 43 chr20 39617567 39617891 -32535991 - AluSx SINE Alu -2 310 1 856 138 6 60 chr20 39617891 39618035 -32535847 - AluJo/FRAM SINE Alu -23 289 154 189 0 0 0 chr20 39618040 39618061 -32535821 + (T)n Simple_repeat Simple_repeat 1 21 0 27 0 0 0 chr20 39618782 39618809 -32535073 + GC_rich Low_complexity Low_complexity 1 27 0 2098 123 0 10 chr20 39620411 39620713 -32533169 - AluSc SINE Alu -9 300 2 974 128 0 0 chr20 39620734 39620867 -32533015 - AluSq/x SINE Alu -179 133 1 1166 132 6 0 chr20 39620921 39621095 -32532787 - L1PA10 LINE L1 0 6168 5994 610 276 86 52 chr20 39621105 39621395 -32532487 - L1ME3A LINE L1 -202 5968 5669 373 235 167 8 chr20 39621417 39621549 -32532333 - MIR SINE MIR -31 231 79 214 315 82 0 chr20 39621880 39621953 -32531929 - MIR SINE MIR -76 186 108 200 128 51 0 chr20 39621957 39621996 -32531886 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 356 274 10 0 chr20 39622439 39622541 -32531341 + MIR SINE MIR 45 147 -115 4527 160 5 23 chr20 39622546 39622924 -32530958 + L1MB8 LINE L1 5412 5770 -408 2045 96 0 105 chr20 39622924 39623256 -32530626 + AluSc SINE Alu 3 299 -10 4527 160 5 23 chr20 39623256 39623655 -32530227 + L1MB8 LINE L1 5770 6175 -3 1914 135 38 0 chr20 39623843 39624131 -32529751 - AluSx SINE Alu -13 299 1 737 247 4 54 chr20 39624386 39624415 -32529467 - L1ME LINE L1 -301 5803 5774 2376 158 57 10 chr20 39624415 39624820 -32529062 - MSTB LTR MaLR -2 424 1 737 247 4 54 chr20 39624820 39625029 -32528853 - L1ME LINE L1 -330 5774 5577 1384 148 0 14 chr20 39625032 39625241 -32528641 - AluJo SINE Alu -25 287 82 484 249 53 120 chr20 39625340 39625512 -32528370 - L1ME LINE L1 -2201 5590 5445 2372 81 3 0 chr20 39625512 39625807 -32528075 - AluSp SINE Alu -17 296 1 484 249 53 120 chr20 39625807 39625935 -32527947 - L1ME LINE L1 -2346 5445 5310 244 293 110 45 chr20 39626171 39626553 -32527329 - L1ME LINE L1 -1170 4959 4553 1694 152 107 0 chr20 39626586 39626856 -32527026 - AluSx SINE Alu -13 299 1 2114 114 21 0 chr20 39626926 39627216 -32526666 + AluSx SINE Alu 1 296 -16 1329 113 173 49 chr20 39627501 39627698 -32526184 + LTR51 LTR ERV1 26 266 -405 2200 123 0 3 chr20 39627698 39628008 -32525874 - AluSx SINE Alu -3 309 1 1329 113 173 49 chr20 39628008 39628076 -32525806 + LTR51 LTR ERV1 266 324 -347 2192 101 0 0 chr20 39628180 39628477 -32525405 + AluSc SINE Alu 1 297 -12 1951 141 47 32 chr20 39628484 39628566 -32525316 + LTR51 LTR ERV1 326 405 -266 2075 99 32 0 chr20 39628566 39628850 -32525032 + AluSx SINE Alu 1 293 -19 1951 141 47 32 chr20 39628850 39629108 -32524774 + LTR51 LTR ERV1 405 671 0 2219 115 0 33 chr20 39629219 39629550 -32524332 - MER1B DNA MER1_type 0 339 20 455 279 31 31 chr20 39629685 39629846 -32524036 - L1ME LINE L1 -1931 4198 4038 334 254 94 43 chr20 39630117 39630255 -32523627 + MIR SINE MIR 4 148 -114 2193 112 0 0 chr20 39630370 39630665 -32523217 - AluSq SINE Alu -18 295 1 184 299 156 0 chr20 39630909 39630986 -32522896 - L3 LINE CR1 -5 1572 1484 240 273 25 19 chr20 39631063 39631166 -32522716 + CT-rich Low_complexity Low_complexity 1 103 0 2173 171 33 71 chr20 39631301 39631821 -32522061 + Charlie4a DNA MER1_type 9 508 0 522 288 101 42 chr20 39631974 39632332 -32521550 + MLT1L LTR MaLR 227 605 -10 479 320 185 38 chr20 39632451 39632553 -32521329 - L3 LINE CR1 -351 1226 1140 1107 161 5 55 chr20 39632553 39632752 -32521130 - MER5A DNA MER1_type 0 189 1 2491 74 0 3 chr20 39632755 39633064 -32520818 + AluY SINE Alu 1 308 -3 479 320 185 38 chr20 39633064 39633638 -32520244 - L3 LINE CR1 -438 1139 446 573 275 45 17 chr20 39634100 39634431 -32519451 - L1ME LINE L1 -3699 2430 2090 1840 144 68 74 chr20 39634591 39634930 -32518952 + MER1B DNA MER1_type 1 337 0 2115 125 7 3 chr20 39635105 39635402 -32518480 - AluSq SINE Alu -15 298 1 440 327 98 20 chr20 39635515 39635821 -32518061 - L1ME LINE L1 -4501 1628 1299 570 253 31 35 chr20 39635871 39636100 -32517782 - L1ME LINE L1 -4917 1202 975 487 110 0 88 chr20 39636148 39636163 -32517719 - Alu SINE Alu 0 310 295 2375 90 0 3 chr20 39636163 39636473 -32517409 - AluY SINE Alu -2 309 1 487 110 0 88 chr20 39636473 39636548 -32517334 - Alu SINE Alu -15 295 228 2781 32 0 0 chr20 39636623 39636934 -32516948 + AluYb8 SINE Alu 2 312 -6 248 51 0 0 chr20 39637145 39637184 -32516698 - Alu SINE Alu 0 301 263 1414 193 37 0 chr20 39637487 39637782 -32516100 - L1ME1 LINE L1 -4 6162 5857 23 0 0 0 chr20 39637782 39637805 -32516077 + AT_rich Low_complexity Low_complexity 1 23 0 6029 139 35 12 chr20 39637805 39638434 -32515448 - L1PB1 LINE L1 -1 6150 5537 189 0 0 0 chr20 39638434 39638455 -32515427 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 6029 139 35 12 chr20 39638455 39639661 -32514221 - L1PB1 LINE L1 -614 5537 3844 201 162 0 27 chr20 39640586 39640623 -32513259 + CT-rich Low_complexity Low_complexity 2 37 0 2076 142 6 3 chr20 39640626 39640937 -32512945 - AluJb SINE Alu 0 312 1 275 263 83 23 chr20 39640937 39641070 -32512812 - MIR SINE MIR -59 203 63 213 277 31 15 chr20 39641454 39641519 -32512363 - MIR SINE MIR -160 102 37 248 130 0 13 chr20 39641665 39641715 -32512167 - MIR SINE MIR -102 160 113 2318 206 112 8 chr20 39641728 39642256 -32511626 - MER119 DNA MER1_type 0 583 1 202 339 0 0 chr20 39642417 39642476 -32511406 + L2 LINE L2 3213 3271 -1 215 189 0 0 chr20 39645377 39645414 -32508468 - L3 LINE CR1 -180 1397 1361 272 262 89 63 chr20 39645427 39645618 -32508264 + L1ME3A LINE L1 5968 6163 -7 186 103 0 0 chr20 39646875 39646904 -32506978 + (A)n Simple_repeat Simple_repeat 1 29 0 204 333 43 75 chr20 39647058 39647151 -32506731 - L2 LINE L2 -44 3228 3139 347 279 93 19 chr20 39647269 39647430 -32506452 - L1ME1 LINE L1 -267 5854 5682 970 151 125 31 chr20 39647453 39647645 -32506237 - MER6B DNA MER2_type 0 210 1 356 241 70 70 chr20 39648603 39648790 -32505092 + MIR SINE MIR 2 188 -74 321 297 89 20 chr20 39648854 39648955 -32504927 - L2 LINE L2 -49 3223 3116 418 118 237 11 chr20 39649153 39649246 -32504636 - L1ME1 LINE L1 -5 6161 6048 1787 150 64 13 chr20 39649246 39649619 -32504263 - Charlie5 DNA MER1_type 0 2624 2233 523 246 78 0 chr20 39649628 39649770 -32504112 - MER3 DNA MER1_type -41 168 16 937 169 0 31 chr20 39649774 39649934 -32503948 - AluJb SINE Alu -157 155 1 14614 137 31 14 chr20 39649935 39653189 -32500693 - L1 LINE L1 -2837 4728 1417 308 262 39 19 chr20 39653233 39653336 -32500546 + L1MC4 LINE L1 6599 6703 -1339 815 218 83 6 chr20 39653848 39654004 -32499878 - FAM SINE Alu -12 173 6 2810 7 0 0 chr20 39654067 39654367 -32499515 - AluYa5 SINE Alu -11 300 1 248 289 84 12 chr20 39654946 39655029 -32498853 + L2 LINE L2 3132 3220 -52 3065 205 91 20 chr20 39657514 39658315 -32495567 - L1ME1 LINE L1 -44 6191 5334 1865 146 29 0 chr20 39658348 39658623 -32495259 + MER1B DNA MER1_type 57 339 0 275 219 143 0 chr20 39658650 39658769 -32495113 - L1ME1 LINE L1 -913 5302 5167 * 760 199 107 26 chr20 39658768 39659040 -32494842 - L1ME1 LINE L1 -2736 3479 3186 189 121 0 0 chr20 39659046 39659079 -32494803 + (TG)n Simple_repeat Simple_repeat 2 34 0 627 244 0 0 chr20 39659081 39659196 -32494686 - FLAM_A SINE Alu -18 115 1 1150 152 37 5 chr20 39659260 39659451 -32494431 + MER46A DNA MER2_type 36 232 -4 3146 190 41 11 chr20 39659490 39660200 -32493682 - L1ME1 LINE L1 -3121 3094 2364 424 155 91 35 chr20 39660211 39660330 -32493552 + MLT1B LTR MaLR 1 145 -240 1105 234 24 70 chr20 39660368 39660504 -32493378 - L1ME1 LINE L1 -4411 1985 1844 2419 87 0 0 chr20 39660504 39660802 -32493080 - AluSg SINE Alu -12 298 1 1105 234 24 70 chr20 39660802 39661037 -32492845 - L1ME1 LINE L1 -4552 1844 1631 1193 131 0 0 chr20 39661038 39661206 -32492676 - AluSg/x SINE Alu -10 302 135 1975 141 6 28 chr20 39661206 39661525 -32492357 - AluSx SINE Alu 0 312 1 402 269 115 75 chr20 39661526 39661857 -32492025 - L1ME1 LINE L1 -4619 1596 1253 1019 183 0 83 chr20 39661859 39662088 -32491794 - AluJb SINE Alu -13 299 90 2768 216 179 36 chr20 39662197 39663254 -32490628 - L1ME1 LINE L1 -5153 1243 36 233 296 23 11 chr20 39663270 39663358 -32490524 - L1M4 LINE L1 -1773 4373 4285 787 279 72 10 chr20 39663375 39663665 -32490217 - MLT1I LTR MaLR -4 405 98 569 254 25 0 chr20 39663704 39663822 -32490060 - MER63A DNA MER1_type -1 209 89 21 0 0 0 chr20 39664078 39664099 -32489783 + AT_rich Low_complexity Low_complexity 1 21 0 372 314 105 73 chr20 39664505 39664932 -32488950 + L2 LINE L2 2832 3272 0 283 328 92 65 chr20 39665825 39666456 -32487426 + L2 LINE L2 2570 3250 -22 327 261 136 0 chr20 39666571 39666659 -32487223 + MER81 DNA DNA 1 100 -14 552 273 130 68 chr20 39667529 39667851 -32486031 + L2 LINE L2 2879 3220 -93 1982 217 70 5 chr20 39668351 39668793 -32485089 + L1M4 LINE L1 3906 4376 -1770 2539 139 67 17 chr20 39668793 39669254 -32484628 + L1MB8 LINE L1 5694 6177 -1 307 289 143 15 chr20 39669254 39669500 -32484382 - L1ME4a LINE L1 -55 6066 5782 202 301 96 44 chr20 39671030 39671166 -32482716 - MIR SINE MIR -4 258 116 * 317 265 88 48 chr20 39671143 39671290 -32482592 + MIR3 SINE MIR 21 173 -35 290 304 156 74 chr20 39671996 39672114 -32481768 + L2 LINE L2 2906 3013 -259 2197 108 29 7 chr20 39672114 39672420 -32481462 - AluSq SINE Alu 0 313 1 290 304 156 74 chr20 39672420 39672640 -32481242 + L2 LINE L2 3013 3272 0 3557 154 72 11 chr20 39673101 39673730 -32480152 - LTR51 LTR ERV1 0 671 5 436 322 41 0 chr20 39673849 39674020 -32479862 + MIR SINE MIR 63 240 -22 209 340 188 5 chr20 39675379 39675799 -32478083 + L2 LINE L2 2150 2646 -668 261 322 87 27 chr20 39676129 39676278 -32477604 - MIR SINE MIR -55 207 50 313 217 0 0 chr20 39676525 39676585 -32477297 + L2 LINE L2 3213 3272 0 193 291 145 8 chr20 39676751 39676842 -32477040 + MIR SINE MIR 124 236 -26 1414 225 105 19 chr20 39676842 39677260 -32476622 - MSTB2 LTR MaLR 0 457 4 193 291 145 8 chr20 39677260 39677285 -32476597 + MIR SINE MIR 236 256 -6 682 275 0 35 chr20 39677515 39677744 -32476138 + MIR SINE MIR 15 235 -27 344 268 113 42 chr20 39678779 39678992 -32474890 + MIR SINE MIR 32 259 -3 347 292 58 15 chr20 39679769 39679906 -32473976 - MER5A DNA MER1_type 0 189 47 256 277 10 69 chr20 39679992 39680093 -32473789 + MIR SINE MIR 161 255 -7 566 229 30 32 chr20 39680706 39680884 -32472998 - MIR SINE MIR -56 206 34 253 230 198 16 chr20 39681316 39681442 -32472440 - MER5B DNA MER1_type -2 176 28 314 236 65 8 chr20 39681639 39681762 -32472120 - L1ME4a LINE L1 -3 6118 5989 282 29 0 0 chr20 39681795 39681830 -32472052 + (TG)n Simple_repeat Simple_repeat 2 36 0 2374 93 0 0 chr20 39682039 39682341 -32471541 - AluSq SINE Alu -11 302 1 270 240 102 79 chr20 39683100 39683294 -32470588 + MIR3 SINE MIR 7 212 -50 325 202 112 0 chr20 39684251 39684340 -32469542 + MIR SINE MIR 40 138 -124 567 190 177 32 chr20 39684340 39684498 -32469384 - MER5A DNA MER1_type 0 189 9 183 233 68 41 chr20 39684506 39684579 -32469303 + MIR SINE MIR 131 205 -57 6118 142 20 16 chr20 39685343 39686416 -32467466 + Ricksha_a DNA DNA 2 1123 -58 2277 109 0 7 chr20 39686596 39686900 -32466982 - AluSx SINE Alu -10 302 1 1729 168 46 32 chr20 39687206 39687576 -32466306 + THE1C LTR MaLR 1 375 0 490 244 91 28 chr20 39688131 39688307 -32465575 - L1MC5 LINE L1 -36 7925 7739 757 233 33 17 chr20 39688455 39688635 -32465247 - MER20 DNA MER1_type 0 219 37 442 271 68 17 chr20 39689422 39689599 -32464283 + MIR SINE MIR 65 250 -12 658 244 45 65 chr20 39691255 39691456 -32462426 - MLT1J LTR MaLR 0 511 315 189 236 91 18 chr20 39691456 39691511 -32462371 + L2 LINE L2 3214 3272 -41 792 209 78 119 chr20 39691528 39691794 -32462088 - MLT1J LTR MaLR -202 309 34 2271 131 0 0 chr20 39691794 39692106 -32461776 + AluSx SINE Alu 1 312 0 2259 116 0 0 chr20 39692116 39692409 -32461473 + AluSq SINE Alu 1 293 -20 792 209 78 119 chr20 39692409 39692451 -32461431 - MLT1J LTR MaLR -486 25 3 417 251 41 78 chr20 39693343 39693562 -32460320 - L1MC4 LINE L1 -3 8039 7829 1803 176 104 35 chr20 39693598 39694084 -32459798 - L1ME2 LINE L1 -19 6143 5611 418 251 43 49 chr20 39694122 39694285 -32459597 - MIR3 SINE MIR -24 184 23 214 365 26 9 chr20 39694648 39694763 -32459119 + L2 LINE L2 2906 3022 -250 594 249 51 17 chr20 39695194 39695371 -32458511 + MIR SINE MIR 69 251 -11 1799 158 0 7 chr20 39696573 39696845 -32457037 - AluJb SINE Alu -30 282 13 630 134 67 40 chr20 39696865 39697014 -32456868 - L1MA9 LINE L1 0 6312 6160 2253 133 19 17 chr20 39697349 39697711 -32456171 - MER47A DNA MER2_type -3 363 1 2349 106 0 3 chr20 39698077 39698389 -32455493 - AluY SINE Alu 0 311 1 227 304 0 0 chr20 39698450 39698506 -32455376 + L2 LINE L2 3193 3248 -24 324 282 20 12 chr20 39699197 39699314 -32454568 - MIR SINE MIR -62 146 30 222 341 82 0 chr20 39699806 39699941 -32453941 + MIR3 SINE MIR 42 187 -21 189 171 0 0 chr20 39700292 39700327 -32453555 + (TG)n Simple_repeat Simple_repeat 2 36 0 436 325 52 20 chr20 39701365 39701617 -32452265 + MIR SINE MIR 3 262 0 433 141 28 0 chr20 39701861 39701932 -32451950 + MLT2B2 LTR ERVL 1 73 -442 * 987 173 46 0 chr20 39701929 39702102 -32451780 + MLT2B1 LTR ERVL 340 520 0 871 292 33 64 chr20 39702102 39702557 -32451325 + L1MC/D LINE L1 5377 5817 -1991 249 313 86 76 chr20 39703063 39703472 -32450410 + L2 LINE L2 2842 3254 -18 333 291 135 7 chr20 39703473 39703614 -32450268 + MIR3 SINE MIR 35 193 -15 1208 239 67 37 chr20 39704499 39704905 -32448977 - L2 LINE L2 -3 3310 2893 * 1875 241 76 38 chr20 39704902 39705329 -32448553 - L2 LINE L2 -538 2776 2314 1895 151 24 7 chr20 39705329 39705627 -32448255 + AluJb SINE Alu 1 303 -9 1875 241 76 38 chr20 39705627 39705858 -32448024 - L2 LINE L2 -1000 2314 2093 363 272 160 24 chr20 39707212 39707381 -32446501 + MIR SINE MIR 1 192 -70 215 309 15 0 chr20 39707863 39707931 -32445951 - MIR SINE MIR -104 158 90 247 268 28 0 chr20 39708032 39708103 -32445779 + MIR SINE MIR 73 145 -117 232 263 25 12 chr20 39709542 39709622 -32444260 - MIR3 SINE MIR -24 184 104 251 274 142 9 chr20 39710955 39711068 -32442814 + MIR SINE MIR 17 144 -64 282 286 51 0 chr20 39711256 39711354 -32442528 + MIR SINE MIR 68 170 -92 1796 151 0 4 chr20 39711423 39711688 -32442194 + AluSx SINE Alu 36 299 -13 238 281 112 12 chr20 39713396 39713607 -32440275 + L2 LINE L2 2795 3087 -226 2141 123 0 19 chr20 39714870 39715179 -32438703 - AluJo SINE Alu -9 303 1 325 257 29 43 chr20 39715400 39715561 -32438321 + MIR SINE MIR 35 192 -70 566 319 103 35 chr20 39715593 39716136 -32437746 + L2 LINE L2 2271 2850 -464 199 351 0 0 chr20 39716324 39716381 -32437501 - L2 LINE L2 -6 3307 3251 865 278 12 4 chr20 39716474 39716715 -32437167 + MIR SINE MIR 20 262 0 575 261 37 53 chr20 39718303 39718548 -32435334 + MIR SINE MIR 22 262 0 281 348 30 0 chr20 39719390 39719554 -32434328 - MER117 DNA MER1_type -28 169 1 352 313 35 0 chr20 39719554 39719669 -32434213 - MIR3 SINE MIR -48 160 42 438 233 106 58 chr20 39721174 39721275 -32432607 + MIR SINE MIR 50 145 -117 1943 138 3 0 chr20 39721275 39721612 -32432270 - AluSx SINE Alu 0 338 1 438 233 106 58 chr20 39721612 39721698 -32432184 + MIR SINE MIR 145 247 -15 336 259 131 122 chr20 39721922 39722265 -32431617 + L2 LINE L2 2927 3272 0 1634 105 0 0 chr20 39722678 39722887 -32430995 + AluSq SINE Alu 1 209 -104 363 94 0 0 chr20 39722887 39722940 -32430942 + AluSq SINE Alu 247 299 -4 1661 183 16 29 chr20 39724632 39724938 -32428944 + AluJb SINE Alu 1 302 -10 551 154 145 0 chr20 39725323 39725440 -32428442 + L1MB8 LINE L1 6036 6169 -9 207 0 0 0 chr20 39725444 39725467 -32428415 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 491 200 0 0 chr20 39725733 39725813 -32428069 - Tigger5 DNA MER2_type 0 2323 2244 2137 97 62 0 chr20 39725817 39726106 -32427776 + AluSp SINE Alu 2 308 -5 301 211 8 42 chr20 39726110 39726222 -32427660 - Tigger5 DNA MER2_type -2131 192 28 1786 116 70 52 chr20 39727432 39727760 -32426122 + MER44D DNA MER2_type 6 609 0 196 239 22 0 chr20 39727897 39727943 -32425939 + L2 LINE L2 3209 3255 -17 220 256 51 39 chr20 39728209 39728287 -32425595 + MIR3 SINE MIR 82 160 -48 297 252 68 39 chr20 39728385 39728488 -32425394 + MIR SINE MIR 16 121 -141 510 205 43 60 chr20 39729615 39729800 -32424082 + L2 LINE L2 3117 3298 -15 190 203 144 93 chr20 39729844 39729962 -32423920 - L2 LINE L2 -12 3260 3137 290 292 62 0 chr20 39730026 39730122 -32423760 - L2 LINE L2 -31 3241 3140 452 142 108 8 chr20 39732168 39732287 -32421595 - L1MB3 LINE L1 -102 6081 5941 524 306 56 13 chr20 39733074 39733306 -32420576 + MIR SINE MIR 17 258 -4 231 238 0 48 chr20 39733378 39733441 -32420441 + MIR SINE MIR 81 140 -122 228 135 0 0 chr20 39734414 39734451 -32419431 + (CA)n Simple_repeat Simple_repeat 2 38 0 325 269 154 22 chr20 39735047 39735229 -32418653 + MIR SINE MIR 51 256 -6 251 238 12 48 chr20 39736053 39736101 -32417781 + MIR SINE MIR 66 111 -97 1231 137 164 55 chr20 39736101 39736393 -32417489 - MER33 DNA MER1_type 0 324 1 251 238 12 48 chr20 39736393 39736428 -32417454 + MIR SINE MIR 111 146 -62 407 309 25 25 chr20 39737191 39737353 -32416529 + MIR SINE MIR 47 208 -54 260 258 62 41 chr20 39737475 39737572 -32416310 - MIR SINE MIR -76 132 34 857 160 24 173 chr20 39737631 39737884 -32415998 + MER33 DNA MER1_type 1 180 -2405 1634 181 50 0 chr20 39737884 39738166 -32415716 - AluJo SINE Alu -10 302 7 857 160 24 173 chr20 39738166 39738293 -32415589 + MER33 DNA MER1_type 180 324 0 818 250 52 16 chr20 39738293 39738545 -32415337 + MIR SINE MIR 2 262 0 767 271 77 58 chr20 39738774 39738973 -32414909 - L2 LINE L2 0 3313 3119 1153 152 28 121 chr20 39738973 39739114 -32414768 + MER33 DNA MER1_type 2 155 -2430 2462 81 3 0 chr20 39739114 39739421 -32414461 - AluSp SINE Alu -5 308 1 1153 152 28 121 chr20 39739421 39739578 -32414304 + MER33 DNA MER1_type 155 264 -2321 2398 104 0 3 chr20 39739578 39739886 -32413996 + AluSp SINE Alu 1 307 -6 1153 152 28 121 chr20 39739886 39739941 -32413941 + MER33 DNA MER1_type 264 323 -1 767 271 77 58 chr20 39739941 39740276 -32413606 - L2 LINE L2 -194 3119 2772 272 355 43 7 chr20 39740275 39740413 -32413469 - MIR3 SINE MIR -28 180 38 * 286 330 96 0 chr20 39740427 39740615 -32413267 - MIR SINE MIR -56 206 1 1991 168 0 0 chr20 39741442 39741752 -32412130 + AluJb SINE Alu 1 310 -2 731 226 45 6 chr20 39741817 39741994 -32411888 - MIR SINE MIR -77 185 2 366 294 65 27 chr20 39741997 39742181 -32411701 - MIR SINE MIR -24 238 48 411 145 72 0 chr20 39742379 39742462 -32411420 - MER5A DNA MER1_type -68 121 33 454 232 53 8 chr20 39742585 39742717 -32411165 + MIR3 SINE MIR 65 202 -6 494 305 12 36 chr20 39742781 39742948 -32410934 + MIR3 SINE MIR 30 192 -16 327 375 49 9 chr20 39743799 39744023 -32409859 - L1MC4a LINE L1 -1903 5905 5673 719 168 0 46 chr20 39744728 39744859 -32409023 - FLAM_C SINE Alu -8 125 1 1235 183 186 3 chr20 39745773 39746084 -32407798 - L1MD3 LINE L1 -10 7985 7618 2297 94 27 0 chr20 39746456 39746755 -32407127 - AluSp SINE Alu -6 307 1 201 256 0 0 chr20 39746851 39746890 -32406992 - L2 LINE L2 -89 3183 3145 1826 161 14 0 chr20 39747115 39747401 -32406481 + AluJo SINE Alu 5 294 -18 698 204 20 146 chr20 39747794 39748088 -32405794 + MIR SINE MIR 4 260 -2 22 0 0 0 chr20 39748140 39748162 -32405720 + AT_rich Low_complexity Low_complexity 1 22 0 14819 122 45 9 chr20 39748598 39750607 -32403275 - Tigger1 DNA MER2_type -2 2416 480 204 40 0 0 chr20 39750607 39750632 -32403250 + (GA)n Simple_repeat Simple_repeat 1 25 0 14819 122 45 9 chr20 39750632 39750864 -32403018 - Tigger1 DNA MER2_type -1938 480 258 1837 150 52 0 chr20 39750864 39751150 -32402732 - AluJb SINE Alu -11 301 1 14819 122 45 9 chr20 39751150 39751240 -32402642 - Tigger1 DNA MER2_type -2160 258 1 2376 90 3 0 chr20 39751535 39751834 -32402048 + AluSc SINE Alu 1 300 -9 242 274 75 38 chr20 39752598 39752704 -32401178 - MIR3 SINE MIR -43 165 56 773 290 116 48 chr20 39754087 39754713 -32399169 - L2 LINE L2 -1 3312 2654 515 302 23 0 chr20 39756540 39756712 -32397170 - MIR SINE MIR -24 238 63 219 348 62 5 chr20 39756817 39756971 -32396911 + L2 LINE L2 3072 3312 -1 244 242 198 11 chr20 39757563 39757654 -32396228 - MIR SINE MIR -135 127 20 402 311 66 33 chr20 39757901 39758113 -32395769 + MIR SINE MIR 41 259 -3 7233 58 6 34 chr20 39760285 39761266 -32392616 - SVA Other Other 0 1386 433 268 230 180 30 chr20 39761606 39761706 -32392176 + MIR3 SINE MIR 44 158 -50 1649 161 13 30 chr20 39762508 39762692 -32391190 - AluJb SINE Alu -1 311 132 2303 81 0 17 chr20 39762692 39763006 -32390876 - AluY SINE Alu 0 311 1 1649 161 13 30 chr20 39763006 39763126 -32390756 - AluJb SINE Alu -180 132 12 26 30 0 0 chr20 39763168 39763201 -32390681 + AT_rich Low_complexity Low_complexity 1 33 0 262 346 53 60 chr20 39763450 39763733 -32390149 - L2 LINE L2 -25 3247 2967 626 271 80 44 chr20 39764481 39764841 -32389041 - L1ME LINE L1 -469 5701 5325 2043 139 0 0 chr20 39764870 39765203 -32388679 + AluSx SINE Alu 1 333 0 210 94 0 0 chr20 39766403 39766435 -32387447 - MIR SINE MIR -74 188 157 187 346 47 19 chr20 39767111 39767322 -32386560 + L3 LINE CR1 1317 1533 -44 1971 142 20 3 chr20 39767587 39767883 -32385999 - AluJo SINE Alu -9 303 3 1962 131 3 13 chr20 39767979 39768277 -32385605 - AluSq SINE Alu -18 295 1 2150 139 0 0 chr20 39768380 39768683 -32385199 + AluSx SINE Alu 1 303 -9 298 339 73 16 chr20 39768738 39768862 -32385020 - MIR SINE MIR -110 152 22 238 219 83 83 chr20 39769133 39769229 -32384653 + MIR3 SINE MIR 89 184 -24 1559 162 70 7 chr20 39770783 39771099 -32382783 + MER33 DNA MER1_type 1 318 -6 313 266 138 9 chr20 39771104 39771213 -32382669 + L2 LINE L2 3150 3272 0 287 261 45 45 chr20 39773139 39773273 -32380609 - MIR SINE MIR -109 153 20 799 212 0 0 chr20 39773374 39773506 -32380376 + FLAM_A SINE Alu 1 132 -1 204 327 80 9 chr20 39773525 39773638 -32380244 + MIR3 SINE MIR 1 121 -87 24 32 0 0 chr20 39773638 39773669 -32380213 + AT_rich Low_complexity Low_complexity 1 31 0 5660 140 27 14 chr20 39773670 39773917 -32379965 - L1MA7 LINE L1 0 6291 6049 2553 57 3 0 chr20 39773917 39774213 -32379669 - AluSp SINE Alu -16 297 1 5660 140 27 14 chr20 39774213 39774921 -32378961 - L1MA7 LINE L1 -242 6049 5323 1003 97 0 8 chr20 39775377 39775511 -32378371 - AluJb SINE Alu -179 133 1 353 286 36 0 chr20 39775795 39775907 -32377975 + MIR SINE MIR 85 200 -62 191 309 69 106 chr20 39775980 39776197 -32377685 - L2 LINE L2 -213 3059 2851 1063 260 91 44 chr20 39776212 39776619 -32377263 + L2 LINE L2 2888 3313 0 210 71 0 0 chr20 39777880 39777908 -32375974 + (TCCCC)n Simple_repeat Simple_repeat 3 30 0 238 235 0 0 chr20 39777912 39777963 -32375919 - L2 LINE L2 -1 3271 3221 196 244 37 49 chr20 39778027 39778109 -32375773 - L2 LINE L2 -473 2841 2761 438 274 0 0 chr20 39778937 39779021 -32374861 - MER58 DNA MER1_type -2336 84 1 234 159 45 0 chr20 39779168 39779212 -32374670 + L2 LINE L2 3268 3313 0 1684 126 77 0 chr20 39779222 39779469 -32374413 - AluSx SINE Alu -15 297 32 2272 105 0 3 chr20 39779620 39779926 -32373956 + AluY SINE Alu 1 305 -6 1558 260 85 30 chr20 39780255 39780786 -32373096 - MER68 LTR ERV1 0 562 3 604 236 76 0 chr20 39780903 39781060 -32372822 + MIR SINE MIR 89 257 -5 258 381 42 18 chr20 39781412 39781580 -32372302 - L2 LINE L2 -224 3048 2877 351 0 0 0 chr20 39781757 39781796 -32372086 + (TG)n Simple_repeat Simple_repeat 2 40 0 804 284 128 25 chr20 39781965 39782373 -32371509 - L1MC4a LINE L1 -1897 5911 5462 219 306 149 8 chr20 39782381 39782502 -32371380 + L2 LINE L2 3115 3252 -20 366 179 30 0 chr20 39783280 39783347 -32370535 - Charlie1 DNA MER1_type -4 2757 2689 * 1342 147 16 52 chr20 39783344 39783595 -32370287 - Charlie1 DNA MER1_type -2519 242 1 299 214 43 0 chr20 39784041 39784111 -32369771 - MIR SINE MIR -13 249 177 425 247 34 0 chr20 39784275 39784364 -32369518 + L2 LINE L2 3209 3300 -13 265 262 12 34 chr20 39784362 39784453 -32369429 - MIR SINE MIR -110 98 20 * 343 286 161 6 chr20 39784604 39784765 -32369117 - L3 LINE CR1 -11 1566 1381 253 311 107 0 chr20 39784789 39784892 -32368990 - L3 LINE CR1 -385 1192 1079 197 377 13 0 chr20 39784999 39785076 -32368806 - L2 LINE L2 -7 3265 3188 531 319 20 54 chr20 39785157 39785455 -32368427 - L3 LINE CR1 -677 900 613 2168 131 0 0 chr20 39785482 39785779 -32368103 - AluSx SINE Alu -12 300 4 297 304 87 54 chr20 39786150 39786541 -32367341 + L1ME LINE L1 4628 5031 -1115 557 278 176 13 chr20 39786817 39787197 -32366685 + L1ME LINE L1 5351 5816 -305 549 237 17 40 chr20 39787211 39787384 -32366498 + MER117 DNA MER1_type 1 169 -28 244 257 81 14 chr20 39788026 39788100 -32365782 - L2 LINE L2 -55 3258 3180 865 198 219 50 chr20 39788131 39788372 -32365510 - MIR SINE MIR 0 262 1 281 248 89 30 chr20 39789719 39789774 -32364108 + L2 LINE L2 3204 3254 -59 2012 152 10 13 chr20 39789774 39790083 -32363799 + AluSx SINE Alu 1 308 -4 281 248 89 30 chr20 39790083 39790128 -32363754 + L2 LINE L2 3254 3310 -3 1327 165 39 31 chr20 39790253 39790513 -32363369 - AluJo SINE Alu -8 304 43 280 271 94 12 chr20 39790529 39790614 -32363268 + MIR SINE MIR 171 262 0 248 297 0 0 chr20 39791130 39791194 -32362688 - L2 LINE L2 -4 3268 3205 1592 144 37 9 chr20 39791251 39791575 -32362307 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr20 39793880 39793902 -32359980 + (TAA)n Simple_repeat Simple_repeat 1 22 0 392 309 10 36 chr20 39796408 39796573 -32357309 - MIR SINE MIR -52 210 46 296 310 46 11 chr20 39796608 39796695 -32357187 - MIR SINE MIR -62 146 57 1045 113 0 0 chr20 39796966 39797099 -32356783 - FLAM_C SINE Alu 0 133 1 183 80 0 0 chr20 39797129 39797154 -32356728 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 2190 118 3 0 chr20 39797490 39797777 -32356105 - AluSx SINE Alu -16 296 9 326 197 76 0 chr20 39798942 39799008 -32354874 - MIR3 SINE MIR -43 165 95 198 0 0 0 chr20 39799079 39799101 -32354781 + (TC)n Simple_repeat Simple_repeat 1 22 0 333 125 0 0 chr20 39799107 39799163 -32354719 + (TG)n Simple_repeat Simple_repeat 1 56 0 188 108 0 27 chr20 39799260 39799297 -32354585 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 2014 134 0 40 chr20 39799308 39799629 -32354253 - AluJo SINE Alu -4 308 1 267 255 221 35 chr20 39800575 39800720 -32353162 - MIR SINE MIR -70 192 21 287 248 59 20 chr20 39801468 39801569 -32352313 + MER5A DNA MER1_type 22 126 -63 26 0 0 0 chr20 39802299 39802325 -32351557 + AT_rich Low_complexity Low_complexity 1 26 0 725 274 47 0 chr20 39803252 39803442 -32350440 + MIR SINE MIR 63 261 -1 185 233 0 23 chr20 39803454 39803497 -32350385 + MIR SINE MIR 216 257 -5 595 300 141 26 chr20 39804235 39804839 -32349043 - L2 LINE L2 -1 3312 2626 285 328 84 0 chr20 39806415 39806534 -32347348 + MIR3 SINE MIR 34 162 -46 279 281 67 89 chr20 39806578 39806713 -32347169 - L2 LINE L2 0 3272 3141 255 191 0 0 chr20 39806844 39806886 -32346996 - MIR SINE MIR -113 149 108 186 337 36 12 chr20 39807120 39807203 -32346679 + MIR SINE MIR 42 126 -82 411 324 28 45 chr20 39807547 39807726 -32346156 + MIR SINE MIR 22 197 -65 308 304 89 53 chr20 39809053 39809559 -32344323 - L2 LINE L2 -18 3254 2717 381 271 145 29 chr20 39811154 39811242 -32342640 - L1ME LINE L1 -317 5804 5728 1990 127 54 30 chr20 39811242 39811443 -32342439 + MER44D DNA MER2_type 1 196 -2295 2362 99 0 13 chr20 39811443 39811757 -32342125 - AluSx SINE Alu -2 310 1 1990 127 54 30 chr20 39811757 39811886 -32341996 + MER44D DNA MER2_type 196 609 0 381 271 145 29 chr20 39811886 39812004 -32341878 - L1ME LINE L1 -393 5728 5574 333 277 122 43 chr20 39812052 39812240 -32341642 - L1ME LINE L1 -2338 5470 5295 479 229 33 82 chr20 39813686 39813864 -32340018 + MIR SINE MIR 48 216 -46 266 329 96 36 chr20 39813864 39814031 -32339851 + MER5B DNA MER1_type 1 177 -1 412 325 24 8 chr20 39814486 39814609 -32339273 - MIR3 SINE MIR -81 127 3 876 168 47 68 chr20 39814887 39815015 -32338867 + MER5A DNA MER1_type 1 126 -63 2350 65 7 0 chr20 39815015 39815326 -32338556 - AluY SINE Alu 0 313 1 876 168 47 68 chr20 39815326 39815386 -32338496 + MER5A DNA MER1_type 126 186 -3 10999 139 32 23 chr20 39865662 39866193 -32287689 - L1PBa LINE L1 -2249 4613 4089 2217 113 6 28 chr20 39866193 39866513 -32287369 - AluSq SINE Alu 0 313 1 2641 49 0 7 chr20 39866522 39866828 -32287054 - AluY SINE Alu -7 304 1 10999 139 32 23 chr20 39866828 39870101 -32283781 - L1PBa LINE L1 -2780 4082 621 1222 143 5 0 chr20 39870089 39870285 -32283597 - L1PBa LINE L1 -6663 200 4 * 1409 162 77 74 chr20 39870299 39870651 -32283231 - L1ME1 LINE L1 -300 5866 5514 391 280 0 8 chr20 39870744 39870862 -32283020 + L2 LINE L2 3195 3311 -2 904 249 73 38 chr20 39871008 39871321 -32282561 - MLT1J LTR MaLR -161 350 27 1028 225 78 9 chr20 39871875 39872106 -32281776 - LTR16C LTR ERVL 0 491 245 288 105 0 168 chr20 39872113 39872208 -32281674 - LTR19A LTR ERV1 -2 484 406 * 775 48 0 10 chr20 39872160 39872263 -32281619 + LTR19A LTR ERV1 385 486 0 573 276 69 30 chr20 39872266 39872498 -32281384 - LTR16C LTR ERVL -250 241 1 580 285 149 62 chr20 39872547 39872937 -32280945 + L2 LINE L2 2849 3272 0 260 248 124 35 chr20 39873583 39873696 -32280186 + L2 LINE L2 2927 3049 -223 180 315 164 0 chr20 39873844 39873917 -32279965 - MIR SINE MIR -98 164 80 188 167 28 0 chr20 39874074 39874110 -32279772 + L2 LINE L2 3268 3304 -9 1679 86 112 37 chr20 39874564 39874857 -32279025 - AluSg1 SINE Alu 0 309 1 2111 113 3 0 chr20 39875222 39875522 -32278360 - AluSq SINE Alu -12 301 1 771 226 153 22 chr20 39875526 39875800 -32278082 - L1MC4a LINE L1 -1921 5887 5578 1026 102 0 182 chr20 39875908 39876144 -32277738 - 7SK RNA RNA 0 193 1 2264 98 3 0 chr20 39876259 39876565 -32277317 - AluSp SINE Alu -6 307 1 657 197 0 0 chr20 39876617 39876734 -32277148 - FRAM SINE Alu -59 117 1 208 260 80 0 chr20 39876883 39876933 -32276949 + L2 LINE L2 3251 3304 -9 328 296 201 15 chr20 39876951 39877150 -32276732 - L1MC/D LINE L1 -2096 5712 5477 309 300 31 15 chr20 39877150 39877280 -32276602 - MIR3 SINE MIR -13 195 64 237 167 0 0 chr20 39877977 39878031 -32275851 + G-rich Low_complexity Low_complexity 1 54 0 227 270 79 34 chr20 39878734 39878823 -32275059 + MLT1K LTR MaLR 26 118 -470 2256 71 0 7 chr20 39878987 39879284 -32274598 + AluY SINE Alu 1 295 -16 1434 193 0 39 chr20 39879308 39879658 -32274224 + AluJo SINE Alu 1 312 0 381 200 33 33 chr20 39879660 39879750 -32274132 + MER58C DNA MER1_type 126 215 0 529 174 43 0 chr20 39879811 39879903 -32273979 + FLAM_C SINE Alu 27 122 -21 283 225 56 22 chr20 39880060 39880149 -32273733 + MLT1K LTR MaLR 489 580 -8 264 284 174 9 chr20 39880182 39880291 -32273591 + L2 LINE L2 2934 3060 -212 353 361 19 24 chr20 39880433 39880641 -32273241 - MIR SINE MIR -36 226 20 243 309 32 21 chr20 39881295 39881389 -32272493 + MIR3 SINE MIR 81 175 -33 1045 112 6 6 chr20 39882170 39882339 -32271543 - AluSg/x SINE Alu -3 309 141 1564 239 59 59 chr20 39882339 39882806 -32271076 + L1MC5 LINE L1 7060 7529 -432 2281 91 3 0 chr20 39882806 39883104 -32270778 - AluSp SINE Alu -14 299 1 1564 239 59 59 chr20 39883104 39883276 -32270606 + L1MC5 LINE L1 7528 7699 -262 304 234 50 92 chr20 39883283 39883424 -32270458 + L1MC5 LINE L1 7749 7883 -78 368 276 79 55 chr20 39885408 39885535 -32268347 + L2 LINE L2 3175 3304 -9 361 236 164 14 chr20 39885759 39885899 -32267983 + MIR SINE MIR 74 234 -28 2217 88 7 0 chr20 39886193 39886489 -32267393 - AluSx SINE Alu -14 298 1 264 319 50 8 chr20 39888679 39888798 -32265084 - L2 LINE L2 -9 3263 3140 256 222 63 0 chr20 39888897 39888960 -32264922 + MIR3 SINE MIR 123 189 -19 243 241 19 0 chr20 39891073 39891127 -32262755 - MIR SINE MIR -67 141 87 217 232 145 0 chr20 39892446 39892515 -32261367 + L2 LINE L2 3193 3271 -42 424 305 55 0 chr20 39892520 39892648 -32261234 - MIR SINE MIR -55 207 73 1940 147 0 3 chr20 39892941 39893240 -32260642 - AluJb SINE Alu -14 298 1 489 262 183 12 chr20 39894520 39894772 -32259110 - L2 LINE L2 -620 2694 2400 1799 121 0 18 chr20 39894827 39895100 -32258782 - AluSg SINE Alu -42 268 1 2016 112 0 14 chr20 39898596 39898891 -32254991 - AluSg SINE Alu -19 291 1 449 259 54 18 chr20 39899495 39899607 -32254275 + MIR SINE MIR 68 183 -79 866 299 96 54 chr20 39900085 39900938 -32252944 - L2 LINE L2 -4 3268 2351 360 264 89 136 chr20 39901487 39901870 -32252012 + L2 LINE L2 2949 3313 0 700 253 17 51 chr20 39901907 39902085 -32251797 - MIR SINE MIR -85 177 6 2171 109 7 0 chr20 39902378 39902680 -32251202 - AluSp SINE Alu -9 304 1 456 120 14 0 chr20 39903488 39903566 -32250316 + MSTD LTR MaLR 326 396 0 325 265 74 43 chr20 39903568 39903636 -32250246 + L1ME4a LINE L1 5748 5812 -309 1590 183 10 7 chr20 39903636 39903926 -32249956 - AluJo SINE Alu -21 291 1 325 265 74 43 chr20 39903926 39904019 -32249863 + L1ME4a LINE L1 5812 5914 -207 1910 103 4 0 chr20 39904171 39904432 -32249450 + AluSq SINE Alu 38 299 -14 211 250 43 22 chr20 39904717 39904809 -32249073 + MIR SINE MIR 106 199 -63 193 135 81 0 chr20 39904978 39905015 -32248867 + L3b LINE CR1 1283 1322 -261 219 167 0 0 chr20 39905821 39905863 -32248019 + A-rich Low_complexity Low_complexity 1 42 0 907 230 78 84 chr20 39906073 39906569 -32247313 + L1ME LINE L1 5279 5762 -359 503 306 45 63 chr20 39907208 39907541 -32246341 + L2 LINE L2 2882 3208 -105 301 289 86 0 chr20 39907650 39907778 -32246104 + L1MC/D LINE L1 5559 5697 -2111 1821 235 55 0 chr20 39908676 39909114 -32244768 + L1MC/D LINE L1 5361 5822 -1986 244 243 14 40 chr20 39909911 39909985 -32243897 + L2 LINE L2 3155 3226 -46 742 294 141 34 chr20 39909988 39910164 -32243718 + L2 LINE L2 2749 2905 -408 1700 156 26 10 chr20 39910164 39910466 -32243416 - AluJo SINE Alu -5 307 1 742 294 141 34 chr20 39910466 39910796 -32243086 + L2 LINE L2 2905 3313 0 2321 68 0 19 chr20 39911131 39911439 -32242443 - AluY SINE Alu -9 302 1 370 153 17 0 chr20 39911542 39911556 -32242326 + MER3 DNA MER1_type 33 47 -162 648 204 235 0 chr20 39911556 39911718 -32242164 - MER3 DNA MER1_type 0 209 10 322 327 19 9 chr20 39911843 39911963 -32241919 + MIR SINE MIR 57 252 -10 188 138 0 0 chr20 39911963 39911992 -32241890 + L2 LINE L2 3226 3254 -18 322 327 19 9 chr20 39911992 39912004 -32241878 + MIR SINE MIR 252 262 0 375 208 42 0 chr20 39914583 39914655 -32239227 - L2 LINE L2 0 3272 3198 931 208 30 39 chr20 39914904 39915135 -32238747 - L1ME3 LINE L1 -1 6161 5933 180 111 0 0 chr20 39915351 39915378 -32238504 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 224 355 59 32 chr20 39915433 39915619 -32238263 - L2 LINE L2 -1904 1410 1220 237 260 0 0 chr20 39915622 39915672 -32238210 - MIR3 SINE MIR -6 202 153 26 0 0 0 chr20 39916298 39916324 -32237558 + AT_rich Low_complexity Low_complexity 1 26 0 343 338 41 5 chr20 39916617 39916837 -32237045 + L1MDa LINE L1 1671 1944 -957 269 345 31 93 chr20 39917377 39917635 -32236247 + L2 LINE L2 2620 2861 -453 321 324 196 0 chr20 39917712 39917885 -32235997 + L2 LINE L2 3094 3300 -13 288 0 0 0 chr20 39918068 39918100 -32235782 + (TG)n Simple_repeat Simple_repeat 1 32 0 427 256 139 64 chr20 39918783 39919530 -32234352 + L1ME LINE L1 676 1365 -4896 1703 174 7 3 chr20 39919530 39919828 -32234054 + AluJb SINE Alu 1 299 -13 427 256 139 64 chr20 39919828 39920348 -32233534 + L1ME LINE L1 1365 2091 -4170 1016 164 22 78 chr20 39920389 39920621 -32233261 - MER20 DNA MER1_type 0 219 1 1923 246 79 19 chr20 39920622 39920987 -32232895 + L1ME LINE L1 4512 4853 -1251 300 53 0 0 chr20 39920987 39921025 -32232857 + (TA)n Simple_repeat Simple_repeat 2 39 0 1923 246 79 19 chr20 39921025 39921816 -32232066 + L1ME LINE L1 4853 5742 -362 232 273 0 0 chr20 39921816 39921871 -32232011 + MARNA DNA Mariner 350 404 -182 618 239 230 25 chr20 39922857 39923175 -32230707 + L2 LINE L2 2928 3310 -3 264 287 228 15 chr20 39923513 39923649 -32230233 + MIR3 SINE MIR 23 187 -21 366 249 67 55 chr20 39923790 39923945 -32229937 - MIR SINE MIR -95 167 8 301 265 39 77 chr20 39923945 39924126 -32229756 + MER5B DNA MER1_type 1 174 -4 24 32 0 0 chr20 39924909 39924940 -32228942 + AT_rich Low_complexity Low_complexity 1 31 0 6881 173 129 45 chr20 39924957 39925957 -32227925 + L1MDa LINE L1 2 916 -5624 2204 120 0 0 chr20 39925957 39926258 -32227624 + AluSq SINE Alu 8 308 -5 6881 173 129 45 chr20 39926258 39926830 -32227052 + L1MDa LINE L1 916 1438 -5102 1881 156 7 0 chr20 39926830 39927119 -32226763 - AluSx SINE Alu -19 293 3 6881 173 129 45 chr20 39927119 39927801 -32226081 + L1MDa LINE L1 1438 2501 -4039 1401 208 72 39 chr20 39927802 39928070 -32225812 + MER2 DNA MER2_type 2 285 -60 2357 151 84 12 chr20 39928070 39928307 -32225575 - Tigger2a DNA MER2_type -2274 434 155 2251 108 7 0 chr20 39928307 39928614 -32225268 + AluSx SINE Alu 1 309 -3 2357 151 84 12 chr20 39928614 39928781 -32225101 - Tigger2a DNA MER2_type -2553 155 1 1401 208 72 39 chr20 39928781 39928844 -32225038 + MER2 DNA MER2_type 285 344 -1 4562 209 67 92 chr20 39928844 39929363 -32224519 + L1MDa LINE L1 2531 3061 -3479 1891 176 7 0 chr20 39929363 39929670 -32224212 - AluJb SINE Alu -3 309 1 4562 209 67 92 chr20 39929670 39930355 -32223527 + L1MDa LINE L1 3061 3762 -2778 2100 122 212 3 chr20 39930355 39930709 -32223173 + MSTC LTR MaLR 1 428 0 4562 209 67 92 chr20 39930709 39931192 -32222690 + L1MDa LINE L1 3762 4173 -2367 306 0 0 0 chr20 39931192 39931226 -32222656 + (CA)n Simple_repeat Simple_repeat 2 35 0 4562 209 67 92 chr20 39931226 39931348 -32222534 + L1MDa LINE L1 4173 4297 -2243 2213 271 127 8 chr20 39931348 39932376 -32221506 + L2 LINE L2 2094 3313 0 491 266 63 68 chr20 39932380 39932632 -32221250 + MIR SINE MIR 12 262 0 655 243 96 19 chr20 39932735 39932961 -32220921 + MIR SINE MIR 20 262 0 1334 152 1